locus-tag class description EJA99_00005 PF00571 CBS domain EJA99_00005 PF03471 Transporter associated domain EJA99_00030 PF01098 Cell cycle protein EJA99_00035 PF00266 Aminotransferase class-V EJA99_00040 PF04002 RadC-like JAB domain EJA99_00080 PF01548 Transposase EJA99_00080 PF02371 Transposase IS116/IS110/IS902 family EJA99_00095 PF03167 Uracil DNA glycosylase superfamily EJA99_00100 PF01327 Polypeptide deformylase EJA99_00105 PF02491 SHS2 domain inserted in FTSA EJA99_00110 PF00557 Metallopeptidase family M24 EJA99_00115 PF00083 Sugar (and other) transporter EJA99_00120 PF01795 MraW methylase family EJA99_00135 PF14693 Ribosomal protein TL5, C-terminal domain EJA99_00135 PF01386 Ribosomal L25p family EJA99_00140 PF01195 Peptidyl-tRNA hydrolase EJA99_00145 PF00154 recA bacterial DNA recombination protein EJA99_00150 PF01416 tRNA pseudouridine synthase EJA99_00155 PF02767 DNA polymerase III beta subunit, central domain EJA99_00155 PF00712 DNA polymerase III beta subunit, N-terminal domain EJA99_00155 PF02768 DNA polymerase III beta subunit, C-terminal domain EJA99_00165 PF04542 Sigma-70 region 2 EJA99_00165 PF04545 Sigma-70, region 4 EJA99_00165 PF00140 Sigma-70 factor, region 1.2 EJA99_00170 PF13505 Outer membrane protein beta-barrel domain EJA99_00175 PF02575 YbaB/EbfC DNA-binding family EJA99_00180 PF12169 DNA polymerase III subunits gamma and tau domain III EJA99_00210 PF13462 Thioredoxin EJA99_00215 PF03364 Polyketide cyclase / dehydrase and lipid transport EJA99_00230 PF02875 Mur ligase family, glutamate ligase domain EJA99_00230 PF08245 Mur ligase middle domain EJA99_00255 PF01523 Putative modulator of DNA gyrase EJA99_00270 PF00355 Rieske [2Fe-2S] domain EJA99_00270 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EJA99_00275 PF00521 DNA gyrase/topoisomerase IV, subunit A EJA99_00275 PF03989 DNA gyrase C-terminal domain, beta-propeller EJA99_00295 PF02632 BioY family EJA99_00300 PF00881 Nitroreductase family EJA99_00310 PF01678 Diaminopimelate epimerase EJA99_00315 PF02629 CoA binding domain EJA99_00315 PF00549 CoA-ligase EJA99_00320 PF00549 CoA-ligase EJA99_00320 PF08442 ATP-grasp domain EJA99_00335 PF04452 RNA methyltransferase EJA99_00355 PF01218 Coproporphyrinogen III oxidase EJA99_00360 PF00512 His Kinase A (phospho-acceptor) domain EJA99_00360 PF13188 PAS domain EJA99_00360 PF00072 Response regulator receiver domain EJA99_00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA99_00360 PF08448 PAS fold EJA99_00365 PF13614 AAA domain EJA99_00370 PF17762 HTH domain found in ParB protein EJA99_00370 PF02195 ParB-like nuclease domain EJA99_00375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EJA99_00375 PF02542 YgbB family EJA99_00385 PF01594 AI-2E family transporter EJA99_00400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_00420 PF00183 Hsp90 protein EJA99_00435 PF02132 RecR protein EJA99_00435 PF13662 Toprim domain EJA99_00475 PF02511 Thymidylate synthase complementing protein EJA99_00480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EJA99_00485 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA99_00485 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA99_00490 PF00550 Phosphopantetheine attachment site EJA99_00495 PF00348 Polyprenyl synthetase EJA99_00505 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_00505 PF07724 AAA domain (Cdc48 subfamily) EJA99_00505 PF10431 C-terminal, D2-small domain, of ClpB protein EJA99_00510 PF00227 Proteasome subunit EJA99_00525 PF00762 Ferrochelatase EJA99_00535 PF02371 Transposase IS116/IS110/IS902 family EJA99_00535 PF01548 Transposase EJA99_00545 PF13537 Glutamine amidotransferase domain EJA99_00545 PF00156 Phosphoribosyl transferase domain EJA99_00560 PF03631 Virulence factor BrkB EJA99_00570 PF02142 MGS-like domain EJA99_00570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EJA99_00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA99_00575 PF01219 Prokaryotic diacylglycerol kinase EJA99_00580 PF00849 RNA pseudouridylate synthase EJA99_00610 PF02223 Thymidylate kinase EJA99_00620 PF02254 TrkA-N domain EJA99_00620 PF00999 Sodium/hydrogen exchanger family EJA99_00625 PF00696 Amino acid kinase family EJA99_00625 PF01842 ACT domain EJA99_00625 PF13840 ACT domain EJA99_00630 PF02463 RecF/RecN/SMC N terminal domain EJA99_00635 PF00578 AhpC/TSA family EJA99_00640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EJA99_00640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EJA99_00645 PF04101 Glycosyltransferase family 28 C-terminal domain EJA99_00645 PF03033 Glycosyltransferase family 28 N-terminal domain EJA99_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA99_00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA99_00685 PF01039 Carboxyl transferase domain EJA99_00710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EJA99_00710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EJA99_00710 PF06827 Zinc finger found in FPG and IleRS EJA99_00715 PF01243 Pyridoxamine 5'-phosphate oxidase EJA99_00715 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EJA99_00730 PF00528 Binding-protein-dependent transport system inner membrane component EJA99_00735 PF01245 Ribosomal protein L19 EJA99_00740 PF01746 tRNA (Guanine-1)-methyltransferase EJA99_00745 PF01259 SAICAR synthetase EJA99_00750 PF02769 AIR synthase related protein, C-terminal domain EJA99_00750 PF00586 AIR synthase related protein, N-terminal domain EJA99_00770 PF01351 Ribonuclease HII EJA99_00775 PF00953 Glycosyl transferase family 4 EJA99_00785 PF02245 Methylpurine-DNA glycosylase (MPG) EJA99_00790 PF02371 Transposase IS116/IS110/IS902 family EJA99_00790 PF01548 Transposase EJA99_00815 PF02390 Putative methyltransferase EJA99_00820 PF00575 S1 RNA binding domain EJA99_00825 PF00216 Bacterial DNA-binding protein EJA99_00840 PF02163 Peptidase family M50 EJA99_00840 PF17820 PDZ domain EJA99_00845 PF01103 Surface antigen EJA99_00845 PF07244 Surface antigen variable number repeat EJA99_00855 PF07977 FabA-like domain EJA99_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA99_00870 PF02978 Signal peptide binding domain EJA99_00870 PF02881 SRP54-type protein, helical bundle domain EJA99_00870 PF00448 SRP54-type protein, GTPase domain EJA99_00875 PF08402 TOBE domain EJA99_00875 PF00005 ABC transporter EJA99_00880 PF02405 Permease MlaE EJA99_00885 PF01783 Ribosomal L32p protein family EJA99_00890 PF02504 Fatty acid synthesis protein EJA99_00895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA99_00895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA99_00905 PF08338 Domain of unknown function (DUF1731) EJA99_00905 PF01370 NAD dependent epimerase/dehydratase family EJA99_00910 PF08245 Mur ligase middle domain EJA99_00910 PF01225 Mur ligase family, catalytic domain EJA99_00910 PF02875 Mur ligase family, glutamate ligase domain EJA99_00925 PF01230 HIT domain EJA99_00930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EJA99_00935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EJA99_00940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EJA99_00945 PF00056 lactate/malate dehydrogenase, NAD binding domain EJA99_00945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EJA99_00950 PF01026 TatD related DNase EJA99_00955 PF00293 NUDIX domain EJA99_00965 PF02371 Transposase IS116/IS110/IS902 family EJA99_00965 PF01548 Transposase EJA99_00975 PF13180 PDZ domain EJA99_00980 PF01145 SPFH domain / Band 7 family EJA99_00985 PF01145 SPFH domain / Band 7 family EJA99_00995 PF01119 DNA mismatch repair protein, C-terminal domain EJA99_00995 PF08676 MutL C terminal dimerisation domain EJA99_01000 PF00731 AIR carboxylase EJA99_01010 PF01192 RNA polymerase Rpb6 EJA99_01020 PF03334 Na+/H+ antiporter subunit EJA99_01025 PF13244 Domain of unknown function (DUF4040) EJA99_01025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJA99_01025 PF00361 Proton-conducting membrane transporter EJA99_01035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJA99_01040 PF04545 Sigma-70, region 4 EJA99_01040 PF04546 Sigma-70, non-essential region EJA99_01040 PF03979 Sigma-70 factor, region 1.1 EJA99_01040 PF00140 Sigma-70 factor, region 1.2 EJA99_01040 PF04542 Sigma-70 region 2 EJA99_01040 PF04539 Sigma-70 region 3 EJA99_01070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJA99_01075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJA99_01085 PF01050 Mannose-6-phosphate isomerase EJA99_01085 PF00483 Nucleotidyl transferase EJA99_01090 PF02687 FtsX-like permease family EJA99_01090 PF12704 MacB-like periplasmic core domain EJA99_01105 PF00231 ATP synthase EJA99_01110 PF01523 Putative modulator of DNA gyrase EJA99_01115 PF00313 'Cold-shock' DNA-binding domain EJA99_01120 PF00270 DEAD/DEAH box helicase EJA99_01120 PF00271 Helicase conserved C-terminal domain EJA99_01125 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_01125 PF07724 AAA domain (Cdc48 subfamily) EJA99_01125 PF17871 AAA lid domain EJA99_01125 PF02861 Clp amino terminal domain, pathogenicity island component EJA99_01125 PF10431 C-terminal, D2-small domain, of ClpB protein EJA99_01135 PF01791 DeoC/LacD family aldolase EJA99_01150 PF01180 Dihydroorotate dehydrogenase EJA99_01155 PF14622 Ribonuclease-III-like EJA99_01155 PF00035 Double-stranded RNA binding motif EJA99_01160 PF02630 SCO1/SenC EJA99_01165 PF00929 Exonuclease EJA99_01175 PF02556 Preprotein translocase subunit SecB EJA99_01180 PF00330 Aconitase family (aconitate hydratase) EJA99_01180 PF00694 Aconitase C-terminal domain EJA99_01185 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EJA99_01185 PF14850 DNA-binding domain of Proline dehydrogenase EJA99_01185 PF01619 Proline dehydrogenase EJA99_01185 PF00171 Aldehyde dehydrogenase family EJA99_01195 PF02789 Cytosol aminopeptidase family, N-terminal domain EJA99_01195 PF00883 Cytosol aminopeptidase family, catalytic domain EJA99_01205 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EJA99_01205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EJA99_01205 PF00384 Molybdopterin oxidoreductase EJA99_01210 PF00146 NADH dehydrogenase EJA99_01215 PF00490 Delta-aminolevulinic acid dehydratase EJA99_01225 PF02091 Glycyl-tRNA synthetase alpha subunit EJA99_01230 PF02092 Glycyl-tRNA synthetase beta subunit EJA99_01230 PF05746 DALR anticodon binding domain EJA99_01235 PF01541 GIY-YIG catalytic domain EJA99_01235 PF02151 UvrB/uvrC motif EJA99_01235 PF08459 UvrC Helix-hairpin-helix N-terminal EJA99_01245 PF08032 RNA 2'-O ribose methyltransferase substrate binding EJA99_01245 PF00588 SpoU rRNA Methylase family EJA99_01265 PF01548 Transposase EJA99_01265 PF02371 Transposase IS116/IS110/IS902 family EJA99_01275 PF02371 Transposase IS116/IS110/IS902 family EJA99_01275 PF01548 Transposase EJA99_01285 PF00226 DnaJ domain EJA99_01285 PF00684 DnaJ central domain EJA99_01285 PF01556 DnaJ C terminal domain EJA99_01295 PF01545 Cation efflux family EJA99_01305 PF02660 Glycerol-3-phosphate acyltransferase EJA99_01310 PF01235 Sodium:alanine symporter family EJA99_01315 PF01235 Sodium:alanine symporter family EJA99_01320 PF01066 CDP-alcohol phosphatidyltransferase EJA99_01325 PF02666 Phosphatidylserine decarboxylase EJA99_01340 PF01751 Toprim domain EJA99_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA99_01340 PF00204 DNA gyrase B EJA99_01340 PF00986 DNA gyrase B subunit, carboxyl terminus EJA99_01345 PF01425 Amidase EJA99_01350 PF01367 5'-3' exonuclease, C-terminal SAM fold EJA99_01350 PF00476 DNA polymerase family A EJA99_01350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EJA99_01385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EJA99_01385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EJA99_01385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EJA99_01385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EJA99_01395 PF00677 Lumazine binding domain EJA99_01405 PF01409 tRNA synthetases class II core domain (F) EJA99_01405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EJA99_01410 PF00132 Bacterial transferase hexapeptide (six repeats) EJA99_01410 PF14602 Hexapeptide repeat of succinyl-transferase EJA99_01410 PF12804 MobA-like NTP transferase domain EJA99_01425 PF00829 Ribosomal prokaryotic L21 protein EJA99_01430 PF01016 Ribosomal L27 protein EJA99_01440 PF02773 S-adenosylmethionine synthetase, C-terminal domain EJA99_01440 PF02772 S-adenosylmethionine synthetase, central domain EJA99_01440 PF00438 S-adenosylmethionine synthetase, N-terminal domain EJA99_01445 PF03070 TENA/THI-4/PQQC family EJA99_01455 PF00510 Cytochrome c oxidase subunit III EJA99_01460 PF02075 Crossover junction endodeoxyribonuclease RuvC EJA99_01465 PF03652 Holliday junction resolvase EJA99_01470 PF02867 Ribonucleotide reductase, barrel domain EJA99_01470 PF03477 ATP cone domain EJA99_01470 PF00317 Ribonucleotide reductase, all-alpha domain EJA99_01495 PF00825 Ribonuclease P EJA99_01500 PF00468 Ribosomal protein L34 EJA99_01505 PF00528 Binding-protein-dependent transport system inner membrane component EJA99_01510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA99_01510 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJA99_01515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EJA99_01525 PF00923 Transaldolase/Fructose-6-phosphate aldolase EJA99_01535 PF00117 Glutamine amidotransferase class-I EJA99_01535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EJA99_01550 PF03143 Elongation factor Tu C-terminal domain EJA99_01550 PF03144 Elongation factor Tu domain 2 EJA99_01550 PF00009 Elongation factor Tu GTP binding domain EJA99_01555 PF00338 Ribosomal protein S10p/S20e EJA99_01560 PF00297 Ribosomal protein L3 EJA99_01565 PF00573 Ribosomal protein L4/L1 family EJA99_01570 PF00276 Ribosomal protein L23 EJA99_01575 PF00181 Ribosomal Proteins L2, RNA binding domain EJA99_01575 PF03947 Ribosomal Proteins L2, C-terminal domain EJA99_01580 PF00203 Ribosomal protein S19 EJA99_01585 PF00237 Ribosomal protein L22p/L17e EJA99_01590 PF00189 Ribosomal protein S3, C-terminal domain EJA99_01590 PF07650 KH domain EJA99_01595 PF00252 Ribosomal protein L16p/L10e EJA99_01600 PF00831 Ribosomal L29 protein EJA99_01605 PF00366 Ribosomal protein S17 EJA99_01610 PF00238 Ribosomal protein L14p/L23e EJA99_01615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EJA99_01620 PF00673 ribosomal L5P family C-terminus EJA99_01620 PF00281 Ribosomal protein L5 EJA99_01625 PF00253 Ribosomal protein S14p/S29e EJA99_01630 PF00410 Ribosomal protein S8 EJA99_01635 PF00347 Ribosomal protein L6 EJA99_01640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EJA99_01645 PF00333 Ribosomal protein S5, N-terminal domain EJA99_01645 PF03719 Ribosomal protein S5, C-terminal domain EJA99_01650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EJA99_01655 PF00344 SecY translocase EJA99_01665 PF00416 Ribosomal protein S13/S18 EJA99_01670 PF00411 Ribosomal protein S11 EJA99_01675 PF01000 RNA polymerase Rpb3/RpoA insert domain EJA99_01675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EJA99_01675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EJA99_01680 PF01196 Ribosomal protein L17 EJA99_01685 PF02021 Uncharacterised protein family UPF0102 EJA99_01690 PF00213 ATP synthase delta (OSCP) subunit EJA99_01695 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJA99_01695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA99_01695 PF00306 ATP synthase alpha/beta chain, C terminal domain EJA99_01700 PF01272 Transcription elongation factor, GreA/GreB, C-term EJA99_01700 PF03449 Transcription elongation factor, N-terminal EJA99_01705 PF00925 GTP cyclohydrolase II EJA99_01705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EJA99_01740 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EJA99_01740 PF02896 PEP-utilising enzyme, TIM barrel domain EJA99_01740 PF00391 PEP-utilising enzyme, mobile domain EJA99_01755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA99_01755 PF00529 HlyD membrane-fusion protein of T1SS EJA99_01760 PF00462 Glutaredoxin EJA99_01775 PF01066 CDP-alcohol phosphatidyltransferase EJA99_01790 PF01709 Transcriptional regulator EJA99_01795 PF08525 Opacity-associated protein A N-terminal motif EJA99_01795 PF01476 LysM domain EJA99_01795 PF01551 Peptidase family M23 EJA99_01830 PF07690 Major Facilitator Superfamily EJA99_01835 PF01209 ubiE/COQ5 methyltransferase family EJA99_01840 PF00005 ABC transporter EJA99_01840 PF00664 ABC transporter transmembrane region EJA99_01855 PF05746 DALR anticodon binding domain EJA99_01855 PF03485 Arginyl tRNA synthetase N terminal domain EJA99_01855 PF00750 tRNA synthetases class I (R) EJA99_01860 PF00005 ABC transporter EJA99_01875 PF14437 MafB19-like deaminase EJA99_01885 PF06418 CTP synthase N-terminus EJA99_01885 PF00117 Glutamine amidotransferase class-I EJA99_01915 PF01380 SIS domain EJA99_01920 PF02699 Preprotein translocase subunit EJA99_01930 PF00318 Ribosomal protein S2 EJA99_01935 PF00889 Elongation factor TS EJA99_01940 PF00696 Amino acid kinase family EJA99_01945 PF01765 Ribosome recycling factor EJA99_01960 PF02386 Cation transport protein EJA99_01965 PF00692 dUTPase EJA99_01975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_02010 PF00579 tRNA synthetases class I (W and Y) EJA99_02025 PF01548 Transposase EJA99_02025 PF02371 Transposase IS116/IS110/IS902 family EJA99_02035 PF10609 NUBPL iron-transfer P-loop NTPase EJA99_02045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_02135 PF10396 GTP-binding protein TrmE N-terminus EJA99_02135 PF12631 MnmE helical domain EJA99_02135 PF01926 50S ribosome-binding GTPase EJA99_02140 PF12838 4Fe-4S dicluster domain EJA99_02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA99_02150 PF03129 Anticodon binding domain EJA99_02150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJA99_02155 PF00707 Translation initiation factor IF-3, C-terminal domain EJA99_02155 PF05198 Translation initiation factor IF-3, N-terminal domain EJA99_02160 PF10531 SLBB domain EJA99_02160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EJA99_02160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EJA99_02185 PF03100 CcmE EJA99_02190 PF02237 Biotin protein ligase C terminal domain EJA99_02190 PF03099 Biotin/lipoate A/B protein ligase family EJA99_02190 PF08279 HTH domain EJA99_02195 PF00361 Proton-conducting membrane transporter EJA99_02200 PF00361 Proton-conducting membrane transporter EJA99_02205 PF00361 Proton-conducting membrane transporter EJA99_02205 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJA99_02210 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJA99_02215 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EJA99_02225 PF00580 UvrD/REP helicase N-terminal domain EJA99_02225 PF13361 UvrD-like helicase C-terminal domain EJA99_02235 PF00034 Cytochrome c EJA99_02240 PF01330 RuvA N terminal domain EJA99_02240 PF07499 RuvA, C-terminal domain EJA99_02245 PF05496 Holliday junction DNA helicase RuvB P-loop domain EJA99_02245 PF05491 RuvB C-terminal winged helix domain EJA99_02245 PF17864 RuvB AAA lid domain EJA99_02260 PF02371 Transposase IS116/IS110/IS902 family EJA99_02260 PF01548 Transposase EJA99_02265 PF01541 GIY-YIG catalytic domain EJA99_02280 PF00285 Citrate synthase, C-terminal domain EJA99_02285 PF01649 Ribosomal protein S20 EJA99_02295 PF00589 Phage integrase family EJA99_02295 PF02899 Phage integrase, N-terminal SAM-like domain EJA99_02305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_02330 PF00925 GTP cyclohydrolase II EJA99_02335 PF04335 VirB8 protein EJA99_02350 PF00437 Type II/IV secretion system protein EJA99_02355 PF02534 Type IV secretory system Conjugative DNA transfer EJA99_02365 PF01396 Topoisomerase DNA binding C4 zinc finger EJA99_02365 PF13368 Topoisomerase C-terminal repeat EJA99_02365 PF01751 Toprim domain EJA99_02365 PF01131 DNA topoisomerase EJA99_02375 PF00083 Sugar (and other) transporter EJA99_02375 PF07690 Major Facilitator Superfamily EJA99_02380 PF18073 Rubredoxin metal binding domain EJA99_02385 PF02881 SRP54-type protein, helical bundle domain EJA99_02385 PF00448 SRP54-type protein, GTPase domain EJA99_02390 PF01592 NifU-like N terminal domain EJA99_02395 PF01521 Iron-sulphur cluster biosynthesis EJA99_02400 PF00226 DnaJ domain EJA99_02400 PF07743 HSCB C-terminal oligomerisation domain EJA99_02405 PF00012 Hsp70 protein EJA99_02410 PF10502 Signal peptidase, peptidase S26 EJA99_02420 PF02780 Transketolase, C-terminal domain EJA99_02420 PF02779 Transketolase, pyrimidine binding domain EJA99_02420 PF00364 Biotin-requiring enzyme EJA99_02430 PF17755 UvrA DNA-binding domain EJA99_02430 PF17760 UvrA interaction domain EJA99_02450 PF01434 Peptidase family M41 EJA99_02450 PF17862 AAA+ lid domain EJA99_02450 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_02485 PF00929 Exonuclease EJA99_02495 PF04055 Radical SAM superfamily EJA99_02495 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EJA99_02500 PF00830 Ribosomal L28 family EJA99_02510 PF04384 Iron-sulphur cluster assembly EJA99_02520 PF00163 Ribosomal protein S4/S9 N-terminal domain EJA99_02520 PF01479 S4 domain EJA99_02525 PF02780 Transketolase, C-terminal domain EJA99_02525 PF00456 Transketolase, thiamine diphosphate binding domain EJA99_02525 PF02779 Transketolase, pyrimidine binding domain EJA99_02530 PF14572 Phosphoribosyl synthetase-associated domain EJA99_02530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EJA99_02535 PF02686 Glu-tRNAGln amidotransferase C subunit EJA99_02540 PF07676 WD40-like Beta Propeller Repeat EJA99_02550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EJA99_02550 PF17770 Ribonuclease J C-terminal domain EJA99_02550 PF12706 Beta-lactamase superfamily domain EJA99_02555 PF01556 DnaJ C terminal domain EJA99_02555 PF00684 DnaJ central domain EJA99_02555 PF00226 DnaJ domain EJA99_02570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EJA99_02570 PF00586 AIR synthase related protein, N-terminal domain EJA99_02570 PF02769 AIR synthase related protein, C-terminal domain EJA99_02585 PF10415 Fumarase C C-terminus EJA99_02585 PF00206 Lyase EJA99_02620 PF00210 Ferritin-like domain EJA99_02625 PF02104 SURF1 family EJA99_02630 PF08245 Mur ligase middle domain EJA99_02630 PF01225 Mur ligase family, catalytic domain EJA99_02630 PF02875 Mur ligase family, glutamate ligase domain EJA99_02640 PF00113 Enolase, C-terminal TIM barrel domain EJA99_02640 PF03952 Enolase, N-terminal domain EJA99_02645 PF01926 50S ribosome-binding GTPase EJA99_02645 PF01018 GTP1/OBG EJA99_02665 PF02325 YGGT family EJA99_02670 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EJA99_02670 PF01580 FtsK/SpoIIIE family EJA99_02670 PF17854 FtsK alpha domain EJA99_02670 PF09397 Ftsk gamma domain EJA99_02685 PF04551 GcpE protein EJA99_02690 PF01556 DnaJ C terminal domain EJA99_02690 PF00684 DnaJ central domain EJA99_02690 PF00226 DnaJ domain EJA99_02700 PF01548 Transposase EJA99_02700 PF02371 Transposase IS116/IS110/IS902 family EJA99_02705 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJA99_02715 PF00596 Class II Aldolase and Adducin N-terminal domain EJA99_02725 PF00814 Glycoprotease family EJA99_02735 PF08241 Methyltransferase domain EJA99_02740 PF08275 DNA primase catalytic core, N-terminal domain EJA99_02740 PF01807 CHC2 zinc finger EJA99_02740 PF13662 Toprim domain EJA99_02740 PF08278 DNA primase DnaG DnaB-binding EJA99_02740 PF10410 DnaB-helicase binding domain of primase EJA99_02750 PF00684 DnaJ central domain EJA99_02750 PF01556 DnaJ C terminal domain EJA99_02750 PF00226 DnaJ domain EJA99_02755 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA99_02765 PF03918 Cytochrome C biogenesis protein EJA99_02770 PF13361 UvrD-like helicase C-terminal domain EJA99_02770 PF00580 UvrD/REP helicase N-terminal domain EJA99_02770 PF12705 PD-(D/E)XK nuclease superfamily EJA99_02775 PF00288 GHMP kinases N terminal domain EJA99_02775 PF08544 GHMP kinases C terminal EJA99_02785 PF00950 ABC 3 transport family EJA99_02800 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJA99_02810 PF13735 tRNA nucleotidyltransferase domain 2 putative EJA99_02810 PF01743 Poly A polymerase head domain EJA99_02810 PF12627 Probable RNA and SrmB- binding site of polymerase A EJA99_02830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EJA99_02830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EJA99_02835 PF00902 Sec-independent protein translocase protein (TatC) EJA99_02845 PF05192 MutS domain III EJA99_02845 PF05188 MutS domain II EJA99_02845 PF01624 MutS domain I EJA99_02845 PF05190 MutS family domain IV EJA99_02845 PF00488 MutS domain V EJA99_02855 PF01336 OB-fold nucleic acid binding domain EJA99_02855 PF00152 tRNA synthetases class II (D, K and N) EJA99_02855 PF02938 GAD domain EJA99_02860 PF00083 Sugar (and other) transporter EJA99_02860 PF08946 Osmosensory transporter coiled coil EJA99_02865 PF00849 RNA pseudouridylate synthase EJA99_02865 PF01479 S4 domain EJA99_02885 PF03448 MgtE intracellular N domain EJA99_02885 PF00571 CBS domain EJA99_02885 PF01769 Divalent cation transporter EJA99_02895 PF01548 Transposase EJA99_02895 PF02371 Transposase IS116/IS110/IS902 family EJA99_02955 PF04984 Phage tail sheath protein subtilisin-like domain EJA99_02955 PF17482 Phage tail sheath C-terminal domain EJA99_03005 PF12255 Insecticide toxin TcdB middle/C-terminal region EJA99_03005 PF12256 Insecticide toxin TcdB middle/N-terminal region EJA99_03005 PF03534 Salmonella virulence plasmid 65kDa B protein EJA99_03010 PF05785 Rho-activating domain of cytotoxic necrotizing factor EJA99_03010 PF18807 Tripartite Tc toxins repeat EJA99_03030 PF18413 Neuraminidase-like domain EJA99_03030 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain EJA99_03030 PF18413 Neuraminidase-like domain EJA99_03030 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain EJA99_03060 PF04002 RadC-like JAB domain EJA99_03075 PF01653 NAD-dependent DNA ligase adenylation domain EJA99_03075 PF00533 BRCA1 C Terminus (BRCT) domain EJA99_03075 PF12826 Helix-hairpin-helix motif EJA99_03075 PF03120 NAD-dependent DNA ligase OB-fold domain EJA99_03100 PF07478 D-ala D-ala ligase C-terminus EJA99_03100 PF01820 D-ala D-ala ligase N-terminus EJA99_03120 PF00037 4Fe-4S binding domain EJA99_03120 PF11953 Domain of unknown function (DUF3470) EJA99_03125 PF02481 DNA recombination-mediator protein A EJA99_03125 PF17782 DprA winged helix domain EJA99_03135 PF13358 DDE superfamily endonuclease EJA99_03140 PF01043 SecA preprotein cross-linking domain EJA99_03140 PF07516 SecA Wing and Scaffold domain EJA99_03140 PF02810 SEC-C motif EJA99_03140 PF07517 SecA DEAD-like domain EJA99_03160 PF02646 RmuC family EJA99_03165 PF07943 Penicillin-binding protein 5, C-terminal domain EJA99_03165 PF00768 D-alanyl-D-alanine carboxypeptidase EJA99_03170 PF04002 RadC-like JAB domain EJA99_03180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EJA99_03180 PF01578 Cytochrome C assembly protein EJA99_03195 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJA99_03195 PF00578 AhpC/TSA family EJA99_03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA99_03245 PF01548 Transposase EJA99_03245 PF02371 Transposase IS116/IS110/IS902 family EJA99_03255 PF01176 Translation initiation factor 1A / IF-1 EJA99_03260 PF02545 Maf-like protein EJA99_03270 PF01235 Sodium:alanine symporter family EJA99_03280 PF00118 TCP-1/cpn60 chaperonin family EJA99_03285 PF00166 Chaperonin 10 Kd subunit EJA99_03290 PF01571 Aminomethyltransferase folate-binding domain EJA99_03315 PF00268 Ribonucleotide reductase, small chain EJA99_03330 PF02565 Recombination protein O C terminal EJA99_03330 PF11967 Recombination protein O N terminal EJA99_03335 PF00072 Response regulator receiver domain EJA99_03335 PF00990 Diguanylate cyclase, GGDEF domain EJA99_03345 PF05088 Bacterial NAD-glutamate dehydrogenase EJA99_03350 PF17871 AAA lid domain EJA99_03350 PF07724 AAA domain (Cdc48 subfamily) EJA99_03350 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_03350 PF02861 Clp amino terminal domain, pathogenicity island component EJA99_03350 PF10431 C-terminal, D2-small domain, of ClpB protein EJA99_03375 PF00364 Biotin-requiring enzyme EJA99_03375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA99_03375 PF02817 e3 binding domain EJA99_03385 PF01255 Putative undecaprenyl diphosphate synthase EJA99_03400 PF01467 Cytidylyltransferase-like EJA99_03490 PF01548 Transposase EJA99_03490 PF02371 Transposase IS116/IS110/IS902 family EJA99_03495 PF00709 Adenylosuccinate synthetase EJA99_03510 PF01494 FAD binding domain EJA99_03520 PF07690 Major Facilitator Superfamily EJA99_03525 PF02875 Mur ligase family, glutamate ligase domain EJA99_03525 PF08245 Mur ligase middle domain EJA99_03525 PF01225 Mur ligase family, catalytic domain EJA99_03530 PF03330 Lytic transglycolase EJA99_03540 PF00293 NUDIX domain EJA99_03540 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EJA99_03540 PF09297 NADH pyrophosphatase zinc ribbon domain EJA99_03575 PF06071 Protein of unknown function (DUF933) EJA99_03575 PF01926 50S ribosome-binding GTPase EJA99_03585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EJA99_03600 PF00005 ABC transporter EJA99_03605 PF02416 mttA/Hcf106 family EJA99_03615 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_03615 PF01348 Type II intron maturase EJA99_03625 PF06055 Exopolysaccharide synthesis, ExoD EJA99_03630 PF01406 tRNA synthetases class I (C) catalytic domain EJA99_03630 PF09190 DALR domain EJA99_03645 PF00075 RNase H EJA99_03650 PF01040 UbiA prenyltransferase family EJA99_03655 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA99_03660 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EJA99_03660 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EJA99_03665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA99_03665 PF00529 HlyD membrane-fusion protein of T1SS EJA99_03675 PF00676 Dehydrogenase E1 component EJA99_03680 PF02637 GatB domain EJA99_03680 PF02934 GatB/GatE catalytic domain EJA99_03685 PF00589 Phage integrase family EJA99_03685 PF02899 Phage integrase, N-terminal SAM-like domain EJA99_03690 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA99_03690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA99_03700 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA99_03710 PF00133 tRNA synthetases class I (I, L, M and V) EJA99_03710 PF08264 Anticodon-binding domain of tRNA EJA99_03725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EJA99_03750 PF01113 Dihydrodipicolinate reductase, N-terminus EJA99_03750 PF05173 Dihydrodipicolinate reductase, C-terminus EJA99_03755 PF00005 ABC transporter EJA99_03770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EJA99_03770 PF13288 DXP reductoisomerase C-terminal domain EJA99_03770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EJA99_03785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA99_03785 PF03129 Anticodon binding domain EJA99_03790 PF01648 4'-phosphopantetheinyl transferase superfamily EJA99_03820 PF00692 dUTPase EJA99_03830 PF01029 NusB family EJA99_03835 PF00885 6,7-dimethyl-8-ribityllumazine synthase EJA99_03840 PF02096 60Kd inner membrane protein EJA99_03840 PF14849 YidC periplasmic domain EJA99_03850 PF02355 Protein export membrane protein EJA99_03850 PF07549 SecD/SecF GG Motif EJA99_03855 PF08299 Bacterial dnaA protein helix-turn-helix EJA99_03855 PF00308 Bacterial dnaA protein EJA99_03855 PF11638 DnaA N-terminal domain EJA99_03860 PF00120 Glutamine synthetase, catalytic domain EJA99_03875 PF08529 NusA N-terminal domain EJA99_03875 PF13184 NusA-like KH domain EJA99_03875 PF00575 S1 RNA binding domain EJA99_03880 PF00009 Elongation factor Tu GTP binding domain EJA99_03880 PF11987 Translation-initiation factor 2 EJA99_03880 PF04760 Translation initiation factor IF-2, N-terminal region EJA99_03885 PF02033 Ribosome-binding factor A EJA99_03890 PF01040 UbiA prenyltransferase family EJA99_03925 PF13333 Integrase core domain EJA99_03925 PF00665 Integrase core domain EJA99_03925 PF13276 HTH-like domain EJA99_03935 PF13333 Integrase core domain EJA99_03935 PF00665 Integrase core domain EJA99_03935 PF13276 HTH-like domain EJA99_03950 PF08264 Anticodon-binding domain of tRNA EJA99_03950 PF09334 tRNA synthetases class I (M) EJA99_03975 PF01121 Dephospho-CoA kinase EJA99_03980 PF00570 HRDC domain EJA99_03980 PF01612 3'-5' exonuclease EJA99_03985 PF01979 Amidohydrolase family EJA99_04025 PF00772 DnaB-like helicase N terminal domain EJA99_04025 PF03796 DnaB-like helicase C terminal domain EJA99_04030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJA99_04030 PF13244 Domain of unknown function (DUF4040) EJA99_04030 PF00361 Proton-conducting membrane transporter EJA99_04045 PF09115 DNA polymerase III, delta subunit, C terminal EJA99_04050 PF01300 Telomere recombination EJA99_04065 PF02875 Mur ligase family, glutamate ligase domain EJA99_04065 PF08245 Mur ligase middle domain EJA99_04070 PF01053 Cys/Met metabolism PLP-dependent enzyme EJA99_04075 PF01722 BolA-like protein EJA99_04080 PF00012 Hsp70 protein EJA99_04085 PF10150 Ribonuclease E/G family EJA99_04085 PF12111 Polyribonucleotide phosphorylase C terminal EJA99_04085 PF00575 S1 RNA binding domain EJA99_04090 PF00471 Ribosomal protein L33 EJA99_04100 PF03109 ABC1 family EJA99_04105 PF00005 ABC transporter EJA99_04110 PF01297 Zinc-uptake complex component A periplasmic EJA99_04140 PF00696 Amino acid kinase family EJA99_04145 PF01926 50S ribosome-binding GTPase EJA99_04150 PF00472 RF-1 domain EJA99_04150 PF03462 PCRF domain EJA99_04205 PF02371 Transposase IS116/IS110/IS902 family EJA99_04205 PF01548 Transposase EJA99_04250 PF00156 Phosphoribosyl transferase domain EJA99_04255 PF00375 Sodium:dicarboxylate symporter family EJA99_04265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EJA99_04265 PF01565 FAD binding domain EJA99_04270 PF03900 Porphobilinogen deaminase, C-terminal domain EJA99_04270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EJA99_04280 PF02355 Protein export membrane protein EJA99_04290 PF13358 DDE superfamily endonuclease EJA99_04305 PF04055 Radical SAM superfamily EJA99_04305 PF00919 Uncharacterized protein family UPF0004 EJA99_04320 PF17191 RecG wedge domain EJA99_04320 PF00271 Helicase conserved C-terminal domain EJA99_04320 PF00270 DEAD/DEAH box helicase EJA99_04335 PF00444 Ribosomal protein L36 EJA99_04340 PF03618 Kinase/pyrophosphorylase EJA99_04345 PF01578 Cytochrome C assembly protein EJA99_04355 PF03958 Bacterial type II/III secretion system short domain EJA99_04355 PF00263 Bacterial type II and III secretion system protein EJA99_04360 PF00117 Glutamine amidotransferase class-I EJA99_04360 PF02540 NAD synthase EJA99_04360 PF00958 GMP synthase C terminal domain EJA99_04365 PF03471 Transporter associated domain EJA99_04365 PF03741 Integral membrane protein TerC family EJA99_04380 PF14492 Elongation Factor G, domain II EJA99_04380 PF00009 Elongation factor Tu GTP binding domain EJA99_04380 PF03144 Elongation factor Tu domain 2 EJA99_04380 PF00679 Elongation factor G C-terminus EJA99_04380 PF06421 GTP-binding protein LepA C-terminus EJA99_04390 PF00462 Glutaredoxin EJA99_04395 PF06574 FAD synthetase EJA99_04395 PF01687 Riboflavin kinase EJA99_04400 PF01252 Signal peptidase (SPase) II EJA99_04405 PF00675 Insulinase (Peptidase family M16) EJA99_04405 PF05193 Peptidase M16 inactive domain EJA99_04420 PF00551 Formyl transferase EJA99_04440 PF01668 SmpB protein EJA99_04445 PF01790 Prolipoprotein diacylglyceryl transferase EJA99_04455 PF13091 PLD-like domain EJA99_04460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EJA99_04500 PF00676 Dehydrogenase E1 component EJA99_04500 PF02779 Transketolase, pyrimidine binding domain EJA99_04500 PF16078 2-oxoglutarate dehydrogenase N-terminus EJA99_04500 PF16870 2-oxoglutarate dehydrogenase C-terminal EJA99_04510 PF00579 tRNA synthetases class I (W and Y) EJA99_04515 PF01025 GrpE EJA99_04520 PF00348 Polyprenyl synthetase EJA99_04525 PF00886 Ribosomal protein S16 EJA99_04545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA99_04545 PF07497 Rho termination factor, RNA-binding domain EJA99_04545 PF07498 Rho termination factor, N-terminal domain EJA99_04550 PF00571 CBS domain EJA99_04550 PF00478 IMP dehydrogenase / GMP reductase domain EJA99_04555 PF00398 Ribosomal RNA adenine dimethylase EJA99_04565 PF00121 Triosephosphate isomerase EJA99_04580 PF00892 EamA-like transporter family EJA99_04585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EJA99_04585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EJA99_04585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EJA99_04595 PF01212 Beta-eliminating lyase EJA99_04600 PF01212 Beta-eliminating lyase EJA99_04605 PF00664 ABC transporter transmembrane region EJA99_04605 PF00005 ABC transporter EJA99_04625 PF01370 NAD dependent epimerase/dehydratase family EJA99_04630 PF12804 MobA-like NTP transferase domain EJA99_04630 PF00132 Bacterial transferase hexapeptide (six repeats) EJA99_04630 PF14602 Hexapeptide repeat of succinyl-transferase EJA99_04645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_04645 PF01348 Type II intron maturase EJA99_04650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_04655 PF08676 MutL C terminal dimerisation domain EJA99_04655 PF01119 DNA mismatch repair protein, C-terminal domain EJA99_04665 PF04002 RadC-like JAB domain EJA99_04690 PF08245 Mur ligase middle domain EJA99_04725 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EJA99_04725 PF00132 Bacterial transferase hexapeptide (six repeats) EJA99_04725 PF14602 Hexapeptide repeat of succinyl-transferase EJA99_04740 PF02910 Fumarate reductase flavoprotein C-term EJA99_04740 PF00890 FAD binding domain EJA99_04750 PF00625 Guanylate kinase EJA99_04765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EJA99_04765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EJA99_04770 PF13416 Bacterial extracellular solute-binding protein EJA99_04785 PF01548 Transposase EJA99_04785 PF02371 Transposase IS116/IS110/IS902 family EJA99_04795 PF01197 Ribosomal protein L31 EJA99_04800 PF00698 Acyl transferase domain EJA99_04805 PF01676 Metalloenzyme superfamily EJA99_04805 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EJA99_04820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJA99_04820 PF01411 tRNA synthetases class II (A) EJA99_04820 PF02272 DHHA1 domain EJA99_04840 PF01632 Ribosomal protein L35 EJA99_04845 PF00453 Ribosomal protein L20 EJA99_04850 PF00551 Formyl transferase EJA99_04850 PF02911 Formyl transferase, C-terminal domain EJA99_04860 PF01808 AICARFT/IMPCHase bienzyme EJA99_04860 PF02142 MGS-like domain EJA99_04865 PF00730 HhH-GPD superfamily base excision DNA repair protein EJA99_04865 PF00633 Helix-hairpin-helix motif EJA99_04865 PF10576 Iron-sulfur binding domain of endonuclease III EJA99_04875 PF00180 Isocitrate/isopropylmalate dehydrogenase EJA99_04875 PF18324 Hypothetical protein TT1725 EJA99_04885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EJA99_04885 PF02844 Phosphoribosylglycinamide synthetase, N domain EJA99_04885 PF02843 Phosphoribosylglycinamide synthetase, C domain EJA99_04890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA99_04890 PF02403 Seryl-tRNA synthetase N-terminal domain EJA99_04900 PF01207 Dihydrouridine synthase (Dus) EJA99_04905 PF04560 RNA polymerase Rpb2, domain 7 EJA99_04905 PF04997 RNA polymerase Rpb1, domain 1 EJA99_04905 PF00623 RNA polymerase Rpb1, domain 2 EJA99_04905 PF04983 RNA polymerase Rpb1, domain 3 EJA99_04905 PF05000 RNA polymerase Rpb1, domain 4 EJA99_04905 PF04998 RNA polymerase Rpb1, domain 5 EJA99_04905 PF04563 RNA polymerase beta subunit EJA99_04905 PF04561 RNA polymerase Rpb2, domain 2 EJA99_04905 PF04565 RNA polymerase Rpb2, domain 3 EJA99_04905 PF10385 RNA polymerase beta subunit external 1 domain EJA99_04905 PF00562 RNA polymerase Rpb2, domain 6 EJA99_04915 PF00466 Ribosomal protein L10 EJA99_04920 PF00687 Ribosomal protein L1p/L10e family EJA99_04925 PF00298 Ribosomal protein L11, RNA binding domain EJA99_04925 PF03946 Ribosomal protein L11, N-terminal domain EJA99_04930 PF02357 Transcription termination factor nusG EJA99_04930 PF00467 KOW motif EJA99_04945 PF00009 Elongation factor Tu GTP binding domain EJA99_04945 PF03144 Elongation factor Tu domain 2 EJA99_04945 PF03143 Elongation factor Tu C-terminal domain EJA99_04950 PF14492 Elongation Factor G, domain II EJA99_04950 PF03764 Elongation factor G, domain IV EJA99_04950 PF03144 Elongation factor Tu domain 2 EJA99_04950 PF00009 Elongation factor Tu GTP binding domain EJA99_04950 PF00679 Elongation factor G C-terminus EJA99_04955 PF00177 Ribosomal protein S7p/S5e EJA99_04960 PF00164 Ribosomal protein S12/S23 EJA99_04965 PF05175 Methyltransferase small domain EJA99_04965 PF02390 Putative methyltransferase EJA99_04965 PF17827 PrmC N-terminal domain EJA99_04980 PF04972 BON domain EJA99_04990 PF05698 Bacterial trigger factor protein (TF) C-terminus EJA99_04990 PF05697 Bacterial trigger factor protein (TF) EJA99_04990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA99_04995 PF00574 Clp protease EJA99_05000 PF07724 AAA domain (Cdc48 subfamily) EJA99_05000 PF10431 C-terminal, D2-small domain, of ClpB protein EJA99_05000 PF06689 ClpX C4-type zinc finger EJA99_05005 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_05005 PF05362 Lon protease (S16) C-terminal proteolytic domain EJA99_05005 PF02190 ATP-dependent protease La (LON) substrate-binding domain EJA99_05010 PF00905 Penicillin binding protein transpeptidase domain EJA99_05010 PF03717 Penicillin-binding Protein dimerisation domain EJA99_05015 PF01522 Polysaccharide deacetylase EJA99_05020 PF13335 Magnesium chelatase, subunit ChlI C-terminal EJA99_05020 PF01078 Magnesium chelatase, subunit ChlI EJA99_05030 PF12327 FtsZ family, C-terminal domain EJA99_05030 PF00091 Tubulin/FtsZ family, GTPase domain EJA99_05045 PF02130 Uncharacterized protein family UPF0054 EJA99_05050 PF13085 2Fe-2S iron-sulfur cluster binding domain EJA99_05065 PF04608 Phosphatidylglycerophosphatase A EJA99_05070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EJA99_05070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EJA99_05075 PF00072 Response regulator receiver domain EJA99_05075 PF00486 Transcriptional regulatory protein, C terminal EJA99_05095 PF01702 Queuine tRNA-ribosyltransferase EJA99_05105 PF00675 Insulinase (Peptidase family M16) EJA99_05105 PF05193 Peptidase M16 inactive domain EJA99_05110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EJA99_05110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EJA99_05125 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJA99_05130 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJA99_05135 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJA99_05140 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJA99_05145 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EJA99_05155 PF01921 tRNA synthetases class I (K) EJA99_05165 PF01728 FtsJ-like methyltransferase EJA99_05170 PF10691 Protein of unknown function (DUF2497) EJA99_05180 PF00572 Ribosomal protein L13 EJA99_05185 PF00380 Ribosomal protein S9/S16 EJA99_05195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EJA99_05205 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJA99_05215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA99_05215 PF02785 Biotin carboxylase C-terminal domain EJA99_05215 PF00289 Biotin carboxylase, N-terminal domain EJA99_05220 PF02628 Cytochrome oxidase assembly protein EJA99_05240 PF00137 ATP synthase subunit C EJA99_05245 PF00119 ATP synthase A chain EJA99_05255 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EJA99_05255 PF01588 Putative tRNA binding domain EJA99_05255 PF03147 Ferredoxin-fold anticodon binding domain EJA99_05255 PF03484 tRNA synthetase B5 domain EJA99_05255 PF03483 B3/4 domain EJA99_05265 PF08264 Anticodon-binding domain of tRNA EJA99_05265 PF00133 tRNA synthetases class I (I, L, M and V) EJA99_05275 PF01938 TRAM domain EJA99_05275 PF04055 Radical SAM superfamily EJA99_05275 PF00919 Uncharacterized protein family UPF0004 EJA99_05280 PF17768 RecJ OB domain EJA99_05280 PF02272 DHHA1 domain EJA99_05280 PF01368 DHH family EJA99_05285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EJA99_05295 PF03060 Nitronate monooxygenase EJA99_05310 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EJA99_05340 PF00557 Metallopeptidase family M24 EJA99_05340 PF01321 Creatinase/Prolidase N-terminal domain EJA99_05345 PF13932 GidA associated domain EJA99_05345 PF01134 Glucose inhibited division protein A EJA99_05360 PF03023 Lipid II flippase MurJ EJA99_05395 PF03099 Biotin/lipoate A/B protein ligase family EJA99_05400 PF02016 LD-carboxypeptidase N-terminal domain EJA99_05400 PF17676 LD-carboxypeptidase C-terminal domain EJA99_05410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EJA99_05410 PF14579 Helix-hairpin-helix motif EJA99_05410 PF02811 PHP domain EJA99_05410 PF07733 Bacterial DNA polymerase III alpha NTPase domain EJA99_05415 PF01250 Ribosomal protein S6 EJA99_05420 PF01084 Ribosomal protein S18 EJA99_05425 PF03948 Ribosomal protein L9, C-terminal domain EJA99_05425 PF01281 Ribosomal protein L9, N-terminal domain EJA99_05430 PF00206 Lyase EJA99_05430 PF10397 Adenylosuccinate lyase C-terminus EJA99_05445 PF13685 Iron-containing alcohol dehydrogenase EJA99_05450 PF01546 Peptidase family M20/M25/M40 EJA99_05450 PF07687 Peptidase dimerisation domain EJA99_05475 PF00186 Dihydrofolate reductase EJA99_05480 PF00809 Pterin binding enzyme EJA99_05480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EJA99_05485 PF02152 Dihydroneopterin aldolase EJA99_05490 PF03070 TENA/THI-4/PQQC family EJA99_05515 PF00085 Thioredoxin EJA99_05535 PF07650 KH domain EJA99_05535 PF01926 50S ribosome-binding GTPase EJA99_05590 PF00528 Binding-protein-dependent transport system inner membrane component EJA99_05595 PF04379 ApaG domain EJA99_05600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EJA99_05600 PF02222 ATP-grasp domain EJA99_05605 PF01118 Semialdehyde dehydrogenase, NAD binding domain EJA99_05605 PF02774 Semialdehyde dehydrogenase, dimerisation domain EJA99_05620 PF13520 Amino acid permease EJA99_05630 PF01975 Survival protein SurE EJA99_05635 PF03129 Anticodon binding domain EJA99_05635 PF13393 Histidyl-tRNA synthetase EJA99_05645 PF00684 DnaJ central domain EJA99_05645 PF01556 DnaJ C terminal domain EJA99_05645 PF00226 DnaJ domain EJA99_05665 PF00032 Cytochrome b(C-terminal)/b6/petD EJA99_05665 PF00033 Cytochrome b/b6/petB EJA99_05670 PF02167 Cytochrome C1 family EJA99_05670 PF00032 Cytochrome b(C-terminal)/b6/petD EJA99_05670 PF00033 Cytochrome b/b6/petB EJA99_05675 PF02151 UvrB/uvrC motif EJA99_05675 PF12344 Ultra-violet resistance protein B EJA99_05675 PF00271 Helicase conserved C-terminal domain EJA99_05675 PF04851 Type III restriction enzyme, res subunit EJA99_05675 PF17757 UvrB interaction domain EJA99_05690 PF00216 Bacterial DNA-binding protein EJA99_05695 PF13411 MerR HTH family regulatory protein EJA99_05700 PF01551 Peptidase family M23 EJA99_05705 PF08264 Anticodon-binding domain of tRNA EJA99_05705 PF00133 tRNA synthetases class I (I, L, M and V) EJA99_05705 PF13603 Leucyl-tRNA synthetase, Domain 2 EJA99_05705 PF09334 tRNA synthetases class I (M) EJA99_05715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EJA99_05715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EJA99_05720 PF02441 Flavoprotein EJA99_05725 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EJA99_05730 PF01595 Cyclin M transmembrane N-terminal domain EJA99_05730 PF03471 Transporter associated domain EJA99_05730 PF00571 CBS domain EJA99_05735 PF00202 Aminotransferase class-III EJA99_05740 PF00334 Nucleoside diphosphate kinase EJA99_05745 PF02371 Transposase IS116/IS110/IS902 family EJA99_05745 PF01548 Transposase EJA99_05775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA99_05795 PF00155 Aminotransferase class I and II EJA99_05805 PF01132 Elongation factor P (EF-P) OB domain EJA99_05805 PF09285 Elongation factor P, C-terminal EJA99_05805 PF08207 Elongation factor P (EF-P) KOW-like domain EJA99_05810 PF01782 RimM N-terminal domain EJA99_05810 PF05239 PRC-barrel domain EJA99_05820 PF00202 Aminotransferase class-III EJA99_05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA99_05825 PF13426 PAS domain EJA99_05825 PF13188 PAS domain EJA99_05825 PF00512 His Kinase A (phospho-acceptor) domain EJA99_05825 PF00989 PAS fold EJA99_05835 PF00814 Glycoprotease family EJA99_05845 PF00664 ABC transporter transmembrane region EJA99_05845 PF00005 ABC transporter EJA99_05855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA99_05855 PF00364 Biotin-requiring enzyme EJA99_05855 PF02817 e3 binding domain EJA99_05870 PF00004 ATPase family associated with various cellular activities (AAA) EJA99_05870 PF17862 AAA+ lid domain EJA99_05870 PF01434 Peptidase family M41 EJA99_05870 PF06480 FtsH Extracellular EJA99_05880 PF01171 PP-loop family EJA99_05885 PF00691 OmpA family EJA99_05910 PF00719 Inorganic pyrophosphatase EJA99_05920 PF09312 SurA N-terminal domain EJA99_05925 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA99_05955 PF02401 LytB protein EJA99_05980 PF00436 Single-strand binding protein family EJA99_05985 PF00701 Dihydrodipicolinate synthetase family EJA99_05990 PF00107 Zinc-binding dehydrogenase EJA99_05990 PF08240 Alcohol dehydrogenase GroES-like domain EJA99_06000 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EJA99_06005 PF01027 Inhibitor of apoptosis-promoting Bax1 EJA99_06010 PF00266 Aminotransferase class-V EJA99_06015 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EJA99_06025 PF00005 ABC transporter EJA99_06030 PF01521 Iron-sulphur cluster biosynthesis EJA99_06035 PF01966 HD domain EJA99_06035 PF13286 Phosphohydrolase-associated domain EJA99_06040 PF01872 RibD C-terminal domain EJA99_06040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EJA99_06050 PF16198 tRNA pseudouridylate synthase B C-terminal domain EJA99_06050 PF01509 TruB family pseudouridylate synthase (N terminal domain) EJA99_06055 PF00312 Ribosomal protein S15 EJA99_06065 PF00834 Ribulose-phosphate 3 epimerase family EJA99_06080 PF00162 Phosphoglycerate kinase EJA99_06085 PF00464 Serine hydroxymethyltransferase EJA99_06100 PF00893 Small Multidrug Resistance protein EJA99_06115 PF01208 Uroporphyrinogen decarboxylase (URO-D)