locus-tag class description EJB00_00005 PF00571 CBS domain EJB00_00005 PF03471 Transporter associated domain EJB00_00030 PF01098 Cell cycle protein EJB00_00035 PF00266 Aminotransferase class-V EJB00_00040 PF04002 RadC-like JAB domain EJB00_00080 PF01548 Transposase EJB00_00080 PF02371 Transposase IS116/IS110/IS902 family EJB00_00095 PF03167 Uracil DNA glycosylase superfamily EJB00_00100 PF01327 Polypeptide deformylase EJB00_00105 PF02491 SHS2 domain inserted in FTSA EJB00_00110 PF00557 Metallopeptidase family M24 EJB00_00115 PF00083 Sugar (and other) transporter EJB00_00120 PF01795 MraW methylase family EJB00_00135 PF14693 Ribosomal protein TL5, C-terminal domain EJB00_00135 PF01386 Ribosomal L25p family EJB00_00140 PF01195 Peptidyl-tRNA hydrolase EJB00_00145 PF00154 recA bacterial DNA recombination protein EJB00_00150 PF01416 tRNA pseudouridine synthase EJB00_00155 PF02767 DNA polymerase III beta subunit, central domain EJB00_00155 PF02768 DNA polymerase III beta subunit, C-terminal domain EJB00_00155 PF00712 DNA polymerase III beta subunit, N-terminal domain EJB00_00165 PF04545 Sigma-70, region 4 EJB00_00165 PF00140 Sigma-70 factor, region 1.2 EJB00_00165 PF04542 Sigma-70 region 2 EJB00_00170 PF13505 Outer membrane protein beta-barrel domain EJB00_00175 PF02575 YbaB/EbfC DNA-binding family EJB00_00180 PF12169 DNA polymerase III subunits gamma and tau domain III EJB00_00210 PF13462 Thioredoxin EJB00_00215 PF03364 Polyketide cyclase / dehydrase and lipid transport EJB00_00230 PF08245 Mur ligase middle domain EJB00_00230 PF02875 Mur ligase family, glutamate ligase domain EJB00_00255 PF01523 Putative modulator of DNA gyrase EJB00_00270 PF00355 Rieske [2Fe-2S] domain EJB00_00270 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EJB00_00275 PF03989 DNA gyrase C-terminal domain, beta-propeller EJB00_00275 PF00521 DNA gyrase/topoisomerase IV, subunit A EJB00_00295 PF02632 BioY family EJB00_00300 PF00881 Nitroreductase family EJB00_00310 PF01678 Diaminopimelate epimerase EJB00_00315 PF00549 CoA-ligase EJB00_00315 PF02629 CoA binding domain EJB00_00320 PF00549 CoA-ligase EJB00_00320 PF08442 ATP-grasp domain EJB00_00335 PF04452 RNA methyltransferase EJB00_00355 PF01218 Coproporphyrinogen III oxidase EJB00_00360 PF00072 Response regulator receiver domain EJB00_00360 PF00512 His Kinase A (phospho-acceptor) domain EJB00_00360 PF08448 PAS fold EJB00_00360 PF13188 PAS domain EJB00_00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJB00_00365 PF13614 AAA domain EJB00_00370 PF02195 ParB-like nuclease domain EJB00_00370 PF17762 HTH domain found in ParB protein EJB00_00375 PF02542 YgbB family EJB00_00375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EJB00_00385 PF01594 AI-2E family transporter EJB00_00400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_00420 PF00183 Hsp90 protein EJB00_00435 PF02132 RecR protein EJB00_00435 PF13662 Toprim domain EJB00_00475 PF02511 Thymidylate synthase complementing protein EJB00_00480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EJB00_00485 PF00109 Beta-ketoacyl synthase, N-terminal domain EJB00_00485 PF02801 Beta-ketoacyl synthase, C-terminal domain EJB00_00490 PF00550 Phosphopantetheine attachment site EJB00_00495 PF00348 Polyprenyl synthetase EJB00_00505 PF10431 C-terminal, D2-small domain, of ClpB protein EJB00_00505 PF07724 AAA domain (Cdc48 subfamily) EJB00_00505 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_00510 PF00227 Proteasome subunit EJB00_00525 PF00762 Ferrochelatase EJB00_00535 PF02371 Transposase IS116/IS110/IS902 family EJB00_00535 PF01548 Transposase EJB00_00545 PF13537 Glutamine amidotransferase domain EJB00_00545 PF00156 Phosphoribosyl transferase domain EJB00_00560 PF03631 Virulence factor BrkB EJB00_00570 PF02142 MGS-like domain EJB00_00570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EJB00_00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJB00_00575 PF01219 Prokaryotic diacylglycerol kinase EJB00_00580 PF00849 RNA pseudouridylate synthase EJB00_00610 PF02223 Thymidylate kinase EJB00_00620 PF00999 Sodium/hydrogen exchanger family EJB00_00620 PF02254 TrkA-N domain EJB00_00625 PF01842 ACT domain EJB00_00625 PF00696 Amino acid kinase family EJB00_00625 PF13840 ACT domain EJB00_00630 PF02463 RecF/RecN/SMC N terminal domain EJB00_00635 PF00578 AhpC/TSA family EJB00_00640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EJB00_00640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EJB00_00645 PF04101 Glycosyltransferase family 28 C-terminal domain EJB00_00645 PF03033 Glycosyltransferase family 28 N-terminal domain EJB00_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJB00_00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJB00_00675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EJB00_00675 PF01926 50S ribosome-binding GTPase EJB00_00685 PF01039 Carboxyl transferase domain EJB00_00710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EJB00_00710 PF06827 Zinc finger found in FPG and IleRS EJB00_00710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EJB00_00715 PF01243 Pyridoxamine 5'-phosphate oxidase EJB00_00715 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EJB00_00730 PF00528 Binding-protein-dependent transport system inner membrane component EJB00_00735 PF01245 Ribosomal protein L19 EJB00_00740 PF01746 tRNA (Guanine-1)-methyltransferase EJB00_00745 PF01259 SAICAR synthetase EJB00_00750 PF02769 AIR synthase related protein, C-terminal domain EJB00_00750 PF00586 AIR synthase related protein, N-terminal domain EJB00_00770 PF01351 Ribonuclease HII EJB00_00775 PF00953 Glycosyl transferase family 4 EJB00_00785 PF02245 Methylpurine-DNA glycosylase (MPG) EJB00_00790 PF01548 Transposase EJB00_00790 PF02371 Transposase IS116/IS110/IS902 family EJB00_00815 PF02390 Putative methyltransferase EJB00_00820 PF00575 S1 RNA binding domain EJB00_00825 PF00216 Bacterial DNA-binding protein EJB00_00840 PF17820 PDZ domain EJB00_00840 PF02163 Peptidase family M50 EJB00_00845 PF07244 Surface antigen variable number repeat EJB00_00845 PF01103 Surface antigen EJB00_00855 PF07977 FabA-like domain EJB00_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJB00_00870 PF02978 Signal peptide binding domain EJB00_00870 PF00448 SRP54-type protein, GTPase domain EJB00_00870 PF02881 SRP54-type protein, helical bundle domain EJB00_00875 PF00005 ABC transporter EJB00_00875 PF08402 TOBE domain EJB00_00880 PF02405 Permease MlaE EJB00_00885 PF01783 Ribosomal L32p protein family EJB00_00890 PF02504 Fatty acid synthesis protein EJB00_00895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJB00_00895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJB00_00905 PF01370 NAD dependent epimerase/dehydratase family EJB00_00905 PF08338 Domain of unknown function (DUF1731) EJB00_00910 PF02875 Mur ligase family, glutamate ligase domain EJB00_00910 PF01225 Mur ligase family, catalytic domain EJB00_00910 PF08245 Mur ligase middle domain EJB00_00925 PF01230 HIT domain EJB00_00930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EJB00_00935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EJB00_00940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EJB00_00945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EJB00_00945 PF00056 lactate/malate dehydrogenase, NAD binding domain EJB00_00950 PF01026 TatD related DNase EJB00_00955 PF00293 NUDIX domain EJB00_00965 PF01548 Transposase EJB00_00965 PF02371 Transposase IS116/IS110/IS902 family EJB00_00975 PF13180 PDZ domain EJB00_00980 PF01145 SPFH domain / Band 7 family EJB00_00985 PF01145 SPFH domain / Band 7 family EJB00_00995 PF01119 DNA mismatch repair protein, C-terminal domain EJB00_00995 PF08676 MutL C terminal dimerisation domain EJB00_01000 PF00731 AIR carboxylase EJB00_01010 PF01192 RNA polymerase Rpb6 EJB00_01020 PF03334 Na+/H+ antiporter subunit EJB00_01025 PF13244 Domain of unknown function (DUF4040) EJB00_01025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJB00_01025 PF00361 Proton-conducting membrane transporter EJB00_01035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJB00_01040 PF04545 Sigma-70, region 4 EJB00_01040 PF04546 Sigma-70, non-essential region EJB00_01040 PF04539 Sigma-70 region 3 EJB00_01040 PF04542 Sigma-70 region 2 EJB00_01040 PF00140 Sigma-70 factor, region 1.2 EJB00_01040 PF03979 Sigma-70 factor, region 1.1 EJB00_01070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJB00_01075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJB00_01085 PF01050 Mannose-6-phosphate isomerase EJB00_01085 PF00483 Nucleotidyl transferase EJB00_01090 PF02687 FtsX-like permease family EJB00_01090 PF12704 MacB-like periplasmic core domain EJB00_01105 PF00231 ATP synthase EJB00_01110 PF01523 Putative modulator of DNA gyrase EJB00_01115 PF00313 'Cold-shock' DNA-binding domain EJB00_01120 PF00270 DEAD/DEAH box helicase EJB00_01120 PF00271 Helicase conserved C-terminal domain EJB00_01125 PF02861 Clp amino terminal domain, pathogenicity island component EJB00_01125 PF17871 AAA lid domain EJB00_01125 PF07724 AAA domain (Cdc48 subfamily) EJB00_01125 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_01125 PF10431 C-terminal, D2-small domain, of ClpB protein EJB00_01135 PF01791 DeoC/LacD family aldolase EJB00_01150 PF01180 Dihydroorotate dehydrogenase EJB00_01155 PF00035 Double-stranded RNA binding motif EJB00_01155 PF14622 Ribonuclease-III-like EJB00_01160 PF02630 SCO1/SenC EJB00_01165 PF00929 Exonuclease EJB00_01175 PF02556 Preprotein translocase subunit SecB EJB00_01180 PF00694 Aconitase C-terminal domain EJB00_01180 PF00330 Aconitase family (aconitate hydratase) EJB00_01185 PF14850 DNA-binding domain of Proline dehydrogenase EJB00_01185 PF01619 Proline dehydrogenase EJB00_01185 PF00171 Aldehyde dehydrogenase family EJB00_01185 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EJB00_01195 PF02789 Cytosol aminopeptidase family, N-terminal domain EJB00_01195 PF00883 Cytosol aminopeptidase family, catalytic domain EJB00_01205 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EJB00_01205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EJB00_01205 PF00384 Molybdopterin oxidoreductase EJB00_01210 PF00146 NADH dehydrogenase EJB00_01215 PF00490 Delta-aminolevulinic acid dehydratase EJB00_01225 PF02091 Glycyl-tRNA synthetase alpha subunit EJB00_01230 PF05746 DALR anticodon binding domain EJB00_01230 PF02092 Glycyl-tRNA synthetase beta subunit EJB00_01235 PF08459 UvrC Helix-hairpin-helix N-terminal EJB00_01235 PF02151 UvrB/uvrC motif EJB00_01235 PF01541 GIY-YIG catalytic domain EJB00_01245 PF00588 SpoU rRNA Methylase family EJB00_01245 PF08032 RNA 2'-O ribose methyltransferase substrate binding EJB00_01265 PF01548 Transposase EJB00_01265 PF02371 Transposase IS116/IS110/IS902 family EJB00_01275 PF01548 Transposase EJB00_01275 PF02371 Transposase IS116/IS110/IS902 family EJB00_01285 PF00226 DnaJ domain EJB00_01285 PF01556 DnaJ C terminal domain EJB00_01285 PF00684 DnaJ central domain EJB00_01295 PF01545 Cation efflux family EJB00_01305 PF02660 Glycerol-3-phosphate acyltransferase EJB00_01310 PF01235 Sodium:alanine symporter family EJB00_01315 PF01235 Sodium:alanine symporter family EJB00_01320 PF01066 CDP-alcohol phosphatidyltransferase EJB00_01325 PF02666 Phosphatidylserine decarboxylase EJB00_01340 PF01751 Toprim domain EJB00_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJB00_01340 PF00986 DNA gyrase B subunit, carboxyl terminus EJB00_01340 PF00204 DNA gyrase B EJB00_01345 PF01425 Amidase EJB00_01350 PF00476 DNA polymerase family A EJB00_01350 PF01367 5'-3' exonuclease, C-terminal SAM fold EJB00_01350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EJB00_01385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EJB00_01385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EJB00_01385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EJB00_01385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EJB00_01395 PF00677 Lumazine binding domain EJB00_01405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EJB00_01405 PF01409 tRNA synthetases class II core domain (F) EJB00_01410 PF14602 Hexapeptide repeat of succinyl-transferase EJB00_01410 PF12804 MobA-like NTP transferase domain EJB00_01410 PF00132 Bacterial transferase hexapeptide (six repeats) EJB00_01425 PF00829 Ribosomal prokaryotic L21 protein EJB00_01430 PF01016 Ribosomal L27 protein EJB00_01440 PF00438 S-adenosylmethionine synthetase, N-terminal domain EJB00_01440 PF02773 S-adenosylmethionine synthetase, C-terminal domain EJB00_01440 PF02772 S-adenosylmethionine synthetase, central domain EJB00_01445 PF03070 TENA/THI-4/PQQC family EJB00_01455 PF00510 Cytochrome c oxidase subunit III EJB00_01460 PF02075 Crossover junction endodeoxyribonuclease RuvC EJB00_01465 PF03652 Holliday junction resolvase EJB00_01470 PF03477 ATP cone domain EJB00_01470 PF00317 Ribonucleotide reductase, all-alpha domain EJB00_01470 PF02867 Ribonucleotide reductase, barrel domain EJB00_01495 PF00825 Ribonuclease P EJB00_01500 PF00468 Ribosomal protein L34 EJB00_01505 PF00528 Binding-protein-dependent transport system inner membrane component EJB00_01510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJB00_01510 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJB00_01515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EJB00_01525 PF00923 Transaldolase/Fructose-6-phosphate aldolase EJB00_01535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EJB00_01535 PF00117 Glutamine amidotransferase class-I EJB00_01550 PF00009 Elongation factor Tu GTP binding domain EJB00_01550 PF03143 Elongation factor Tu C-terminal domain EJB00_01550 PF03144 Elongation factor Tu domain 2 EJB00_01555 PF00338 Ribosomal protein S10p/S20e EJB00_01560 PF00297 Ribosomal protein L3 EJB00_01565 PF00573 Ribosomal protein L4/L1 family EJB00_01570 PF00276 Ribosomal protein L23 EJB00_01575 PF03947 Ribosomal Proteins L2, C-terminal domain EJB00_01575 PF00181 Ribosomal Proteins L2, RNA binding domain EJB00_01580 PF00203 Ribosomal protein S19 EJB00_01585 PF00237 Ribosomal protein L22p/L17e EJB00_01590 PF07650 KH domain EJB00_01590 PF00189 Ribosomal protein S3, C-terminal domain EJB00_01595 PF00252 Ribosomal protein L16p/L10e EJB00_01600 PF00831 Ribosomal L29 protein EJB00_01605 PF00366 Ribosomal protein S17 EJB00_01610 PF00238 Ribosomal protein L14p/L23e EJB00_01615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EJB00_01620 PF00673 ribosomal L5P family C-terminus EJB00_01620 PF00281 Ribosomal protein L5 EJB00_01625 PF00253 Ribosomal protein S14p/S29e EJB00_01630 PF00410 Ribosomal protein S8 EJB00_01635 PF00347 Ribosomal protein L6 EJB00_01640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EJB00_01645 PF03719 Ribosomal protein S5, C-terminal domain EJB00_01645 PF00333 Ribosomal protein S5, N-terminal domain EJB00_01650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EJB00_01655 PF00344 SecY translocase EJB00_01665 PF00416 Ribosomal protein S13/S18 EJB00_01670 PF00411 Ribosomal protein S11 EJB00_01675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EJB00_01675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EJB00_01675 PF01000 RNA polymerase Rpb3/RpoA insert domain EJB00_01680 PF01196 Ribosomal protein L17 EJB00_01685 PF02021 Uncharacterised protein family UPF0102 EJB00_01690 PF00213 ATP synthase delta (OSCP) subunit EJB00_01695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJB00_01695 PF00306 ATP synthase alpha/beta chain, C terminal domain EJB00_01695 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJB00_01700 PF01272 Transcription elongation factor, GreA/GreB, C-term EJB00_01700 PF03449 Transcription elongation factor, N-terminal EJB00_01705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EJB00_01705 PF00925 GTP cyclohydrolase II EJB00_01735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EJB00_01735 PF02896 PEP-utilising enzyme, TIM barrel domain EJB00_01735 PF00391 PEP-utilising enzyme, mobile domain EJB00_01750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJB00_01750 PF00529 HlyD membrane-fusion protein of T1SS EJB00_01755 PF00462 Glutaredoxin EJB00_01765 PF01515 Phosphate acetyl/butaryl transferase EJB00_01765 PF00390 Malic enzyme, N-terminal domain EJB00_01765 PF03949 Malic enzyme, NAD binding domain EJB00_01770 PF01066 CDP-alcohol phosphatidyltransferase EJB00_01785 PF01709 Transcriptional regulator EJB00_01790 PF01551 Peptidase family M23 EJB00_01790 PF08525 Opacity-associated protein A N-terminal motif EJB00_01790 PF01476 LysM domain EJB00_01825 PF07690 Major Facilitator Superfamily EJB00_01830 PF01209 ubiE/COQ5 methyltransferase family EJB00_01835 PF00664 ABC transporter transmembrane region EJB00_01835 PF00005 ABC transporter EJB00_01850 PF00750 tRNA synthetases class I (R) EJB00_01850 PF05746 DALR anticodon binding domain EJB00_01850 PF03485 Arginyl tRNA synthetase N terminal domain EJB00_01855 PF00005 ABC transporter EJB00_01870 PF14437 MafB19-like deaminase EJB00_01880 PF06418 CTP synthase N-terminus EJB00_01880 PF00117 Glutamine amidotransferase class-I EJB00_01910 PF01380 SIS domain EJB00_01915 PF02699 Preprotein translocase subunit EJB00_01925 PF00318 Ribosomal protein S2 EJB00_01930 PF00889 Elongation factor TS EJB00_01935 PF00696 Amino acid kinase family EJB00_01940 PF01765 Ribosome recycling factor EJB00_01955 PF02386 Cation transport protein EJB00_01960 PF00692 dUTPase EJB00_01970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_02005 PF00579 tRNA synthetases class I (W and Y) EJB00_02020 PF01548 Transposase EJB00_02020 PF02371 Transposase IS116/IS110/IS902 family EJB00_02030 PF10609 NUBPL iron-transfer P-loop NTPase EJB00_02040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_02130 PF10396 GTP-binding protein TrmE N-terminus EJB00_02130 PF01926 50S ribosome-binding GTPase EJB00_02130 PF12631 MnmE helical domain EJB00_02135 PF12838 4Fe-4S dicluster domain EJB00_02145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJB00_02145 PF03129 Anticodon binding domain EJB00_02145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJB00_02150 PF05198 Translation initiation factor IF-3, N-terminal domain EJB00_02150 PF00707 Translation initiation factor IF-3, C-terminal domain EJB00_02155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EJB00_02155 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EJB00_02155 PF10531 SLBB domain EJB00_02180 PF03100 CcmE EJB00_02185 PF03099 Biotin/lipoate A/B protein ligase family EJB00_02185 PF02237 Biotin protein ligase C terminal domain EJB00_02185 PF08279 HTH domain EJB00_02190 PF00361 Proton-conducting membrane transporter EJB00_02195 PF00361 Proton-conducting membrane transporter EJB00_02200 PF00361 Proton-conducting membrane transporter EJB00_02200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJB00_02205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJB00_02210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EJB00_02220 PF13361 UvrD-like helicase C-terminal domain EJB00_02220 PF00580 UvrD/REP helicase N-terminal domain EJB00_02230 PF00034 Cytochrome c EJB00_02235 PF01330 RuvA N terminal domain EJB00_02235 PF07499 RuvA, C-terminal domain EJB00_02240 PF17864 RuvB AAA lid domain EJB00_02240 PF05496 Holliday junction DNA helicase RuvB P-loop domain EJB00_02240 PF05491 RuvB C-terminal winged helix domain EJB00_02255 PF02371 Transposase IS116/IS110/IS902 family EJB00_02255 PF01548 Transposase EJB00_02260 PF01541 GIY-YIG catalytic domain EJB00_02275 PF00285 Citrate synthase, C-terminal domain EJB00_02280 PF01649 Ribosomal protein S20 EJB00_02290 PF02899 Phage integrase, N-terminal SAM-like domain EJB00_02290 PF00589 Phage integrase family EJB00_02300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_02325 PF00925 GTP cyclohydrolase II EJB00_02330 PF04335 VirB8 protein EJB00_02345 PF00437 Type II/IV secretion system protein EJB00_02350 PF02534 Type IV secretory system Conjugative DNA transfer EJB00_02360 PF01131 DNA topoisomerase EJB00_02360 PF01751 Toprim domain EJB00_02360 PF13368 Topoisomerase C-terminal repeat EJB00_02360 PF01396 Topoisomerase DNA binding C4 zinc finger EJB00_02370 PF07690 Major Facilitator Superfamily EJB00_02370 PF00083 Sugar (and other) transporter EJB00_02375 PF18073 Rubredoxin metal binding domain EJB00_02380 PF00448 SRP54-type protein, GTPase domain EJB00_02380 PF02881 SRP54-type protein, helical bundle domain EJB00_02385 PF01592 NifU-like N terminal domain EJB00_02390 PF01521 Iron-sulphur cluster biosynthesis EJB00_02395 PF00226 DnaJ domain EJB00_02395 PF07743 HSCB C-terminal oligomerisation domain EJB00_02400 PF00012 Hsp70 protein EJB00_02405 PF10502 Signal peptidase, peptidase S26 EJB00_02415 PF02779 Transketolase, pyrimidine binding domain EJB00_02415 PF02780 Transketolase, C-terminal domain EJB00_02415 PF00364 Biotin-requiring enzyme EJB00_02425 PF17755 UvrA DNA-binding domain EJB00_02425 PF17760 UvrA interaction domain EJB00_02445 PF01434 Peptidase family M41 EJB00_02445 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_02445 PF17862 AAA+ lid domain EJB00_02480 PF00929 Exonuclease EJB00_02490 PF04055 Radical SAM superfamily EJB00_02490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EJB00_02495 PF00830 Ribosomal L28 family EJB00_02505 PF04384 Iron-sulphur cluster assembly EJB00_02515 PF01479 S4 domain EJB00_02515 PF00163 Ribosomal protein S4/S9 N-terminal domain EJB00_02520 PF02779 Transketolase, pyrimidine binding domain EJB00_02520 PF02780 Transketolase, C-terminal domain EJB00_02520 PF00456 Transketolase, thiamine diphosphate binding domain EJB00_02525 PF14572 Phosphoribosyl synthetase-associated domain EJB00_02525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EJB00_02530 PF02686 Glu-tRNAGln amidotransferase C subunit EJB00_02535 PF07676 WD40-like Beta Propeller Repeat EJB00_02545 PF17770 Ribonuclease J C-terminal domain EJB00_02545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EJB00_02545 PF12706 Beta-lactamase superfamily domain EJB00_02550 PF00684 DnaJ central domain EJB00_02550 PF01556 DnaJ C terminal domain EJB00_02550 PF00226 DnaJ domain EJB00_02565 PF00586 AIR synthase related protein, N-terminal domain EJB00_02565 PF02769 AIR synthase related protein, C-terminal domain EJB00_02565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EJB00_02580 PF00206 Lyase EJB00_02580 PF10415 Fumarase C C-terminus EJB00_02615 PF00210 Ferritin-like domain EJB00_02620 PF02104 SURF1 family EJB00_02625 PF01225 Mur ligase family, catalytic domain EJB00_02625 PF02875 Mur ligase family, glutamate ligase domain EJB00_02625 PF08245 Mur ligase middle domain EJB00_02635 PF03952 Enolase, N-terminal domain EJB00_02635 PF00113 Enolase, C-terminal TIM barrel domain EJB00_02640 PF01926 50S ribosome-binding GTPase EJB00_02640 PF01018 GTP1/OBG EJB00_02660 PF02325 YGGT family EJB00_02665 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EJB00_02665 PF01580 FtsK/SpoIIIE family EJB00_02665 PF17854 FtsK alpha domain EJB00_02665 PF09397 Ftsk gamma domain EJB00_02680 PF04551 GcpE protein EJB00_02685 PF00226 DnaJ domain EJB00_02685 PF00684 DnaJ central domain EJB00_02685 PF01556 DnaJ C terminal domain EJB00_02695 PF01548 Transposase EJB00_02695 PF02371 Transposase IS116/IS110/IS902 family EJB00_02700 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJB00_02710 PF00596 Class II Aldolase and Adducin N-terminal domain EJB00_02720 PF00814 Glycoprotease family EJB00_02730 PF08241 Methyltransferase domain EJB00_02735 PF08278 DNA primase DnaG DnaB-binding EJB00_02735 PF10410 DnaB-helicase binding domain of primase EJB00_02735 PF08275 DNA primase catalytic core, N-terminal domain EJB00_02735 PF13662 Toprim domain EJB00_02735 PF01807 CHC2 zinc finger EJB00_02745 PF00684 DnaJ central domain EJB00_02745 PF01556 DnaJ C terminal domain EJB00_02745 PF00226 DnaJ domain EJB00_02750 PF00111 2Fe-2S iron-sulfur cluster binding domain EJB00_02760 PF03918 Cytochrome C biogenesis protein EJB00_02765 PF00580 UvrD/REP helicase N-terminal domain EJB00_02765 PF12705 PD-(D/E)XK nuclease superfamily EJB00_02765 PF13361 UvrD-like helicase C-terminal domain EJB00_02770 PF08544 GHMP kinases C terminal EJB00_02770 PF00288 GHMP kinases N terminal domain EJB00_02780 PF00950 ABC 3 transport family EJB00_02795 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJB00_02805 PF13735 tRNA nucleotidyltransferase domain 2 putative EJB00_02805 PF12627 Probable RNA and SrmB- binding site of polymerase A EJB00_02805 PF01743 Poly A polymerase head domain EJB00_02825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EJB00_02825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EJB00_02830 PF00902 Sec-independent protein translocase protein (TatC) EJB00_02840 PF01624 MutS domain I EJB00_02840 PF05188 MutS domain II EJB00_02840 PF05190 MutS family domain IV EJB00_02840 PF00488 MutS domain V EJB00_02840 PF05192 MutS domain III EJB00_02850 PF00152 tRNA synthetases class II (D, K and N) EJB00_02850 PF01336 OB-fold nucleic acid binding domain EJB00_02850 PF02938 GAD domain EJB00_02855 PF08946 Osmosensory transporter coiled coil EJB00_02855 PF00083 Sugar (and other) transporter EJB00_02860 PF00849 RNA pseudouridylate synthase EJB00_02860 PF01479 S4 domain EJB00_02880 PF00571 CBS domain EJB00_02880 PF01769 Divalent cation transporter EJB00_02880 PF03448 MgtE intracellular N domain EJB00_02890 PF02371 Transposase IS116/IS110/IS902 family EJB00_02890 PF01548 Transposase EJB00_02950 PF04984 Phage tail sheath protein subtilisin-like domain EJB00_02950 PF17482 Phage tail sheath C-terminal domain EJB00_03000 PF03534 Salmonella virulence plasmid 65kDa B protein EJB00_03000 PF12256 Insecticide toxin TcdB middle/N-terminal region EJB00_03000 PF12255 Insecticide toxin TcdB middle/C-terminal region EJB00_03005 PF05785 Rho-activating domain of cytotoxic necrotizing factor EJB00_03005 PF18807 Tripartite Tc toxins repeat EJB00_03020 PF18413 Neuraminidase-like domain EJB00_03020 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain EJB00_03030 PF18413 Neuraminidase-like domain EJB00_03030 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain EJB00_03050 PF04002 RadC-like JAB domain EJB00_03065 PF12826 Helix-hairpin-helix motif EJB00_03065 PF00533 BRCA1 C Terminus (BRCT) domain EJB00_03065 PF03120 NAD-dependent DNA ligase OB-fold domain EJB00_03065 PF01653 NAD-dependent DNA ligase adenylation domain EJB00_03090 PF01820 D-ala D-ala ligase N-terminus EJB00_03090 PF07478 D-ala D-ala ligase C-terminus EJB00_03110 PF00037 4Fe-4S binding domain EJB00_03110 PF11953 Domain of unknown function (DUF3470) EJB00_03115 PF02481 DNA recombination-mediator protein A EJB00_03115 PF17782 DprA winged helix domain EJB00_03125 PF13358 DDE superfamily endonuclease EJB00_03130 PF02810 SEC-C motif EJB00_03130 PF01043 SecA preprotein cross-linking domain EJB00_03130 PF07516 SecA Wing and Scaffold domain EJB00_03130 PF07517 SecA DEAD-like domain EJB00_03150 PF02646 RmuC family EJB00_03155 PF00768 D-alanyl-D-alanine carboxypeptidase EJB00_03155 PF07943 Penicillin-binding protein 5, C-terminal domain EJB00_03160 PF04002 RadC-like JAB domain EJB00_03170 PF01578 Cytochrome C assembly protein EJB00_03170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EJB00_03185 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJB00_03185 PF00578 AhpC/TSA family EJB00_03190 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJB00_03235 PF02371 Transposase IS116/IS110/IS902 family EJB00_03235 PF01548 Transposase EJB00_03245 PF01176 Translation initiation factor 1A / IF-1 EJB00_03250 PF02545 Maf-like protein EJB00_03260 PF01235 Sodium:alanine symporter family EJB00_03270 PF00118 TCP-1/cpn60 chaperonin family EJB00_03275 PF00166 Chaperonin 10 Kd subunit EJB00_03280 PF01571 Aminomethyltransferase folate-binding domain EJB00_03305 PF00268 Ribonucleotide reductase, small chain EJB00_03320 PF02565 Recombination protein O C terminal EJB00_03320 PF11967 Recombination protein O N terminal EJB00_03325 PF00990 Diguanylate cyclase, GGDEF domain EJB00_03325 PF00072 Response regulator receiver domain EJB00_03335 PF05088 Bacterial NAD-glutamate dehydrogenase EJB00_03340 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_03340 PF07724 AAA domain (Cdc48 subfamily) EJB00_03340 PF17871 AAA lid domain EJB00_03340 PF02861 Clp amino terminal domain, pathogenicity island component EJB00_03340 PF10431 C-terminal, D2-small domain, of ClpB protein EJB00_03365 PF02817 e3 binding domain EJB00_03365 PF00364 Biotin-requiring enzyme EJB00_03365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJB00_03375 PF01255 Putative undecaprenyl diphosphate synthase EJB00_03390 PF01467 Cytidylyltransferase-like EJB00_03480 PF02371 Transposase IS116/IS110/IS902 family EJB00_03480 PF01548 Transposase EJB00_03490 PF00709 Adenylosuccinate synthetase EJB00_03505 PF01494 FAD binding domain EJB00_03515 PF07690 Major Facilitator Superfamily EJB00_03520 PF01225 Mur ligase family, catalytic domain EJB00_03520 PF02875 Mur ligase family, glutamate ligase domain EJB00_03520 PF08245 Mur ligase middle domain EJB00_03525 PF03330 Lytic transglycolase EJB00_03535 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EJB00_03535 PF09297 NADH pyrophosphatase zinc ribbon domain EJB00_03535 PF00293 NUDIX domain EJB00_03570 PF06071 Protein of unknown function (DUF933) EJB00_03570 PF01926 50S ribosome-binding GTPase EJB00_03580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EJB00_03595 PF00005 ABC transporter EJB00_03600 PF02416 mttA/Hcf106 family EJB00_03610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_03610 PF01348 Type II intron maturase EJB00_03620 PF06055 Exopolysaccharide synthesis, ExoD EJB00_03625 PF01406 tRNA synthetases class I (C) catalytic domain EJB00_03625 PF09190 DALR domain EJB00_03640 PF00075 RNase H EJB00_03645 PF01040 UbiA prenyltransferase family EJB00_03650 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJB00_03655 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EJB00_03655 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EJB00_03660 PF00529 HlyD membrane-fusion protein of T1SS EJB00_03660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJB00_03670 PF00676 Dehydrogenase E1 component EJB00_03675 PF02637 GatB domain EJB00_03675 PF02934 GatB/GatE catalytic domain EJB00_03680 PF02899 Phage integrase, N-terminal SAM-like domain EJB00_03680 PF00589 Phage integrase family EJB00_03685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJB00_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJB00_03695 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJB00_03705 PF00133 tRNA synthetases class I (I, L, M and V) EJB00_03705 PF08264 Anticodon-binding domain of tRNA EJB00_03720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EJB00_03745 PF01113 Dihydrodipicolinate reductase, N-terminus EJB00_03745 PF05173 Dihydrodipicolinate reductase, C-terminus EJB00_03750 PF00005 ABC transporter EJB00_03760 PF13288 DXP reductoisomerase C-terminal domain EJB00_03760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EJB00_03760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EJB00_03775 PF03129 Anticodon binding domain EJB00_03775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJB00_03780 PF01648 4'-phosphopantetheinyl transferase superfamily EJB00_03810 PF00692 dUTPase EJB00_03820 PF01029 NusB family EJB00_03825 PF00885 6,7-dimethyl-8-ribityllumazine synthase EJB00_03830 PF14849 YidC periplasmic domain EJB00_03830 PF02096 60Kd inner membrane protein EJB00_03840 PF07549 SecD/SecF GG Motif EJB00_03840 PF02355 Protein export membrane protein EJB00_03845 PF00308 Bacterial dnaA protein EJB00_03845 PF08299 Bacterial dnaA protein helix-turn-helix EJB00_03845 PF11638 DnaA N-terminal domain EJB00_03850 PF00120 Glutamine synthetase, catalytic domain EJB00_03865 PF00575 S1 RNA binding domain EJB00_03865 PF08529 NusA N-terminal domain EJB00_03865 PF13184 NusA-like KH domain EJB00_03870 PF11987 Translation-initiation factor 2 EJB00_03870 PF00009 Elongation factor Tu GTP binding domain EJB00_03870 PF04760 Translation initiation factor IF-2, N-terminal region EJB00_03875 PF02033 Ribosome-binding factor A EJB00_03880 PF01040 UbiA prenyltransferase family EJB00_03910 PF00665 Integrase core domain EJB00_03910 PF13333 Integrase core domain EJB00_03910 PF13276 HTH-like domain EJB00_03920 PF13276 HTH-like domain EJB00_03920 PF00665 Integrase core domain EJB00_03920 PF13333 Integrase core domain EJB00_03935 PF09334 tRNA synthetases class I (M) EJB00_03935 PF08264 Anticodon-binding domain of tRNA EJB00_03960 PF01121 Dephospho-CoA kinase EJB00_03965 PF00570 HRDC domain EJB00_03965 PF01612 3'-5' exonuclease EJB00_03970 PF01979 Amidohydrolase family EJB00_04010 PF03796 DnaB-like helicase C terminal domain EJB00_04010 PF00772 DnaB-like helicase N terminal domain EJB00_04015 PF00361 Proton-conducting membrane transporter EJB00_04015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJB00_04015 PF13244 Domain of unknown function (DUF4040) EJB00_04030 PF09115 DNA polymerase III, delta subunit, C terminal EJB00_04035 PF01300 Telomere recombination EJB00_04050 PF08245 Mur ligase middle domain EJB00_04050 PF02875 Mur ligase family, glutamate ligase domain EJB00_04055 PF01053 Cys/Met metabolism PLP-dependent enzyme EJB00_04060 PF01722 BolA-like protein EJB00_04065 PF00012 Hsp70 protein EJB00_04070 PF10150 Ribonuclease E/G family EJB00_04070 PF00575 S1 RNA binding domain EJB00_04070 PF12111 Polyribonucleotide phosphorylase C terminal EJB00_04075 PF00471 Ribosomal protein L33 EJB00_04085 PF03109 ABC1 family EJB00_04090 PF00005 ABC transporter EJB00_04095 PF01297 Zinc-uptake complex component A periplasmic EJB00_04125 PF00696 Amino acid kinase family EJB00_04130 PF01926 50S ribosome-binding GTPase EJB00_04135 PF00472 RF-1 domain EJB00_04135 PF03462 PCRF domain EJB00_04190 PF01548 Transposase EJB00_04190 PF02371 Transposase IS116/IS110/IS902 family EJB00_04235 PF00156 Phosphoribosyl transferase domain EJB00_04240 PF00375 Sodium:dicarboxylate symporter family EJB00_04250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EJB00_04250 PF01565 FAD binding domain EJB00_04255 PF03900 Porphobilinogen deaminase, C-terminal domain EJB00_04255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EJB00_04265 PF02355 Protein export membrane protein EJB00_04275 PF13358 DDE superfamily endonuclease EJB00_04290 PF00919 Uncharacterized protein family UPF0004 EJB00_04290 PF04055 Radical SAM superfamily EJB00_04305 PF00270 DEAD/DEAH box helicase EJB00_04305 PF00271 Helicase conserved C-terminal domain EJB00_04305 PF17191 RecG wedge domain EJB00_04320 PF00444 Ribosomal protein L36 EJB00_04325 PF03618 Kinase/pyrophosphorylase EJB00_04330 PF01578 Cytochrome C assembly protein EJB00_04340 PF00263 Bacterial type II and III secretion system protein EJB00_04340 PF03958 Bacterial type II/III secretion system short domain EJB00_04345 PF02540 NAD synthase EJB00_04345 PF00117 Glutamine amidotransferase class-I EJB00_04345 PF00958 GMP synthase C terminal domain EJB00_04350 PF03741 Integral membrane protein TerC family EJB00_04350 PF03471 Transporter associated domain EJB00_04365 PF06421 GTP-binding protein LepA C-terminus EJB00_04365 PF00009 Elongation factor Tu GTP binding domain EJB00_04365 PF03144 Elongation factor Tu domain 2 EJB00_04365 PF14492 Elongation Factor G, domain II EJB00_04365 PF00679 Elongation factor G C-terminus EJB00_04375 PF00462 Glutaredoxin EJB00_04380 PF06574 FAD synthetase EJB00_04380 PF01687 Riboflavin kinase EJB00_04385 PF01252 Signal peptidase (SPase) II EJB00_04390 PF05193 Peptidase M16 inactive domain EJB00_04390 PF00675 Insulinase (Peptidase family M16) EJB00_04405 PF00551 Formyl transferase EJB00_04425 PF01668 SmpB protein EJB00_04430 PF01790 Prolipoprotein diacylglyceryl transferase EJB00_04440 PF13091 PLD-like domain EJB00_04445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EJB00_04485 PF16078 2-oxoglutarate dehydrogenase N-terminus EJB00_04485 PF16870 2-oxoglutarate dehydrogenase C-terminal EJB00_04485 PF02779 Transketolase, pyrimidine binding domain EJB00_04485 PF00676 Dehydrogenase E1 component EJB00_04495 PF00579 tRNA synthetases class I (W and Y) EJB00_04500 PF01025 GrpE EJB00_04505 PF00348 Polyprenyl synthetase EJB00_04510 PF00886 Ribosomal protein S16 EJB00_04530 PF07498 Rho termination factor, N-terminal domain EJB00_04530 PF07497 Rho termination factor, RNA-binding domain EJB00_04530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJB00_04535 PF00571 CBS domain EJB00_04535 PF00478 IMP dehydrogenase / GMP reductase domain EJB00_04540 PF00398 Ribosomal RNA adenine dimethylase EJB00_04550 PF00121 Triosephosphate isomerase EJB00_04565 PF00892 EamA-like transporter family EJB00_04570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EJB00_04570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EJB00_04570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EJB00_04580 PF01212 Beta-eliminating lyase EJB00_04585 PF01212 Beta-eliminating lyase EJB00_04590 PF00664 ABC transporter transmembrane region EJB00_04590 PF00005 ABC transporter EJB00_04610 PF01370 NAD dependent epimerase/dehydratase family EJB00_04615 PF00132 Bacterial transferase hexapeptide (six repeats) EJB00_04615 PF12804 MobA-like NTP transferase domain EJB00_04615 PF14602 Hexapeptide repeat of succinyl-transferase EJB00_04630 PF01348 Type II intron maturase EJB00_04630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_04635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_04640 PF08676 MutL C terminal dimerisation domain EJB00_04640 PF01119 DNA mismatch repair protein, C-terminal domain EJB00_04650 PF04002 RadC-like JAB domain EJB00_04675 PF08245 Mur ligase middle domain EJB00_04710 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EJB00_04710 PF14602 Hexapeptide repeat of succinyl-transferase EJB00_04710 PF00132 Bacterial transferase hexapeptide (six repeats) EJB00_04725 PF00890 FAD binding domain EJB00_04725 PF02910 Fumarate reductase flavoprotein C-term EJB00_04735 PF00625 Guanylate kinase EJB00_04750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EJB00_04750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EJB00_04755 PF13416 Bacterial extracellular solute-binding protein EJB00_04770 PF01548 Transposase EJB00_04770 PF02371 Transposase IS116/IS110/IS902 family EJB00_04780 PF01197 Ribosomal protein L31 EJB00_04785 PF00698 Acyl transferase domain EJB00_04790 PF01676 Metalloenzyme superfamily EJB00_04790 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EJB00_04805 PF02272 DHHA1 domain EJB00_04805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJB00_04805 PF01411 tRNA synthetases class II (A) EJB00_04825 PF01632 Ribosomal protein L35 EJB00_04830 PF00453 Ribosomal protein L20 EJB00_04835 PF02911 Formyl transferase, C-terminal domain EJB00_04835 PF00551 Formyl transferase EJB00_04845 PF01808 AICARFT/IMPCHase bienzyme EJB00_04845 PF02142 MGS-like domain EJB00_04850 PF00730 HhH-GPD superfamily base excision DNA repair protein EJB00_04850 PF00633 Helix-hairpin-helix motif EJB00_04850 PF10576 Iron-sulfur binding domain of endonuclease III EJB00_04860 PF00180 Isocitrate/isopropylmalate dehydrogenase EJB00_04860 PF18324 Hypothetical protein TT1725 EJB00_04870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EJB00_04870 PF02843 Phosphoribosylglycinamide synthetase, C domain EJB00_04870 PF02844 Phosphoribosylglycinamide synthetase, N domain EJB00_04875 PF02403 Seryl-tRNA synthetase N-terminal domain EJB00_04875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJB00_04885 PF01207 Dihydrouridine synthase (Dus) EJB00_04890 PF05000 RNA polymerase Rpb1, domain 4 EJB00_04890 PF04983 RNA polymerase Rpb1, domain 3 EJB00_04890 PF10385 RNA polymerase beta subunit external 1 domain EJB00_04890 PF04563 RNA polymerase beta subunit EJB00_04890 PF04561 RNA polymerase Rpb2, domain 2 EJB00_04890 PF04565 RNA polymerase Rpb2, domain 3 EJB00_04890 PF00562 RNA polymerase Rpb2, domain 6 EJB00_04890 PF04560 RNA polymerase Rpb2, domain 7 EJB00_04890 PF04998 RNA polymerase Rpb1, domain 5 EJB00_04890 PF00623 RNA polymerase Rpb1, domain 2 EJB00_04890 PF04997 RNA polymerase Rpb1, domain 1 EJB00_04900 PF00466 Ribosomal protein L10 EJB00_04905 PF00687 Ribosomal protein L1p/L10e family EJB00_04910 PF00298 Ribosomal protein L11, RNA binding domain EJB00_04910 PF03946 Ribosomal protein L11, N-terminal domain EJB00_04915 PF02357 Transcription termination factor nusG EJB00_04915 PF00467 KOW motif EJB00_04930 PF03143 Elongation factor Tu C-terminal domain EJB00_04930 PF00009 Elongation factor Tu GTP binding domain EJB00_04930 PF03144 Elongation factor Tu domain 2 EJB00_04935 PF00679 Elongation factor G C-terminus EJB00_04935 PF03764 Elongation factor G, domain IV EJB00_04935 PF14492 Elongation Factor G, domain II EJB00_04935 PF03144 Elongation factor Tu domain 2 EJB00_04935 PF00009 Elongation factor Tu GTP binding domain EJB00_04940 PF00177 Ribosomal protein S7p/S5e EJB00_04945 PF00164 Ribosomal protein S12/S23 EJB00_04950 PF05175 Methyltransferase small domain EJB00_04950 PF02390 Putative methyltransferase EJB00_04950 PF17827 PrmC N-terminal domain EJB00_04965 PF04972 BON domain EJB00_04975 PF05697 Bacterial trigger factor protein (TF) EJB00_04975 PF05698 Bacterial trigger factor protein (TF) C-terminus EJB00_04975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJB00_04980 PF00574 Clp protease EJB00_04985 PF07724 AAA domain (Cdc48 subfamily) EJB00_04985 PF10431 C-terminal, D2-small domain, of ClpB protein EJB00_04985 PF06689 ClpX C4-type zinc finger EJB00_04990 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_04990 PF05362 Lon protease (S16) C-terminal proteolytic domain EJB00_04990 PF02190 ATP-dependent protease La (LON) substrate-binding domain EJB00_04995 PF03717 Penicillin-binding Protein dimerisation domain EJB00_04995 PF00905 Penicillin binding protein transpeptidase domain EJB00_05000 PF01522 Polysaccharide deacetylase EJB00_05005 PF01078 Magnesium chelatase, subunit ChlI EJB00_05005 PF13335 Magnesium chelatase, subunit ChlI C-terminal EJB00_05015 PF00091 Tubulin/FtsZ family, GTPase domain EJB00_05015 PF12327 FtsZ family, C-terminal domain EJB00_05030 PF02130 Uncharacterized protein family UPF0054 EJB00_05035 PF13085 2Fe-2S iron-sulfur cluster binding domain EJB00_05050 PF04608 Phosphatidylglycerophosphatase A EJB00_05055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EJB00_05055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EJB00_05060 PF00072 Response regulator receiver domain EJB00_05060 PF00486 Transcriptional regulatory protein, C terminal EJB00_05080 PF01702 Queuine tRNA-ribosyltransferase EJB00_05090 PF00675 Insulinase (Peptidase family M16) EJB00_05090 PF05193 Peptidase M16 inactive domain EJB00_05095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EJB00_05095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EJB00_05110 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJB00_05115 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJB00_05120 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJB00_05125 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EJB00_05130 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EJB00_05140 PF01921 tRNA synthetases class I (K) EJB00_05150 PF01728 FtsJ-like methyltransferase EJB00_05155 PF10691 Protein of unknown function (DUF2497) EJB00_05165 PF00572 Ribosomal protein L13 EJB00_05170 PF00380 Ribosomal protein S9/S16 EJB00_05180 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EJB00_05190 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJB00_05200 PF00289 Biotin carboxylase, N-terminal domain EJB00_05200 PF02785 Biotin carboxylase C-terminal domain EJB00_05200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJB00_05205 PF02628 Cytochrome oxidase assembly protein EJB00_05225 PF00137 ATP synthase subunit C EJB00_05230 PF00119 ATP synthase A chain EJB00_05240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EJB00_05240 PF03483 B3/4 domain EJB00_05240 PF01588 Putative tRNA binding domain EJB00_05240 PF03147 Ferredoxin-fold anticodon binding domain EJB00_05240 PF03484 tRNA synthetase B5 domain EJB00_05250 PF08264 Anticodon-binding domain of tRNA EJB00_05250 PF00133 tRNA synthetases class I (I, L, M and V) EJB00_05260 PF04055 Radical SAM superfamily EJB00_05260 PF01938 TRAM domain EJB00_05260 PF00919 Uncharacterized protein family UPF0004 EJB00_05265 PF01368 DHH family EJB00_05265 PF02272 DHHA1 domain EJB00_05265 PF17768 RecJ OB domain EJB00_05270 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EJB00_05280 PF03060 Nitronate monooxygenase EJB00_05295 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EJB00_05325 PF00557 Metallopeptidase family M24 EJB00_05325 PF01321 Creatinase/Prolidase N-terminal domain EJB00_05330 PF01134 Glucose inhibited division protein A EJB00_05330 PF13932 GidA associated domain EJB00_05345 PF03023 Lipid II flippase MurJ EJB00_05380 PF03099 Biotin/lipoate A/B protein ligase family EJB00_05385 PF02016 LD-carboxypeptidase N-terminal domain EJB00_05385 PF17676 LD-carboxypeptidase C-terminal domain EJB00_05395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EJB00_05395 PF14579 Helix-hairpin-helix motif EJB00_05395 PF02811 PHP domain EJB00_05395 PF07733 Bacterial DNA polymerase III alpha NTPase domain EJB00_05400 PF01250 Ribosomal protein S6 EJB00_05405 PF01084 Ribosomal protein S18 EJB00_05410 PF03948 Ribosomal protein L9, C-terminal domain EJB00_05410 PF01281 Ribosomal protein L9, N-terminal domain EJB00_05415 PF10397 Adenylosuccinate lyase C-terminus EJB00_05415 PF00206 Lyase EJB00_05430 PF13685 Iron-containing alcohol dehydrogenase EJB00_05435 PF07687 Peptidase dimerisation domain EJB00_05435 PF01546 Peptidase family M20/M25/M40 EJB00_05460 PF00186 Dihydrofolate reductase EJB00_05465 PF00809 Pterin binding enzyme EJB00_05465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EJB00_05470 PF02152 Dihydroneopterin aldolase EJB00_05475 PF03070 TENA/THI-4/PQQC family EJB00_05500 PF00085 Thioredoxin EJB00_05520 PF07650 KH domain EJB00_05520 PF01926 50S ribosome-binding GTPase EJB00_05575 PF00528 Binding-protein-dependent transport system inner membrane component EJB00_05580 PF04379 ApaG domain EJB00_05585 PF02222 ATP-grasp domain EJB00_05585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EJB00_05590 PF01118 Semialdehyde dehydrogenase, NAD binding domain EJB00_05590 PF02774 Semialdehyde dehydrogenase, dimerisation domain EJB00_05605 PF13520 Amino acid permease EJB00_05615 PF01975 Survival protein SurE EJB00_05620 PF13393 Histidyl-tRNA synthetase EJB00_05620 PF03129 Anticodon binding domain EJB00_05630 PF01556 DnaJ C terminal domain EJB00_05630 PF00684 DnaJ central domain EJB00_05630 PF00226 DnaJ domain EJB00_05650 PF00032 Cytochrome b(C-terminal)/b6/petD EJB00_05650 PF00033 Cytochrome b/b6/petB EJB00_05655 PF02167 Cytochrome C1 family EJB00_05655 PF00033 Cytochrome b/b6/petB EJB00_05655 PF00032 Cytochrome b(C-terminal)/b6/petD EJB00_05660 PF17757 UvrB interaction domain EJB00_05660 PF12344 Ultra-violet resistance protein B EJB00_05660 PF02151 UvrB/uvrC motif EJB00_05660 PF04851 Type III restriction enzyme, res subunit EJB00_05660 PF00271 Helicase conserved C-terminal domain EJB00_05675 PF00216 Bacterial DNA-binding protein EJB00_05680 PF13411 MerR HTH family regulatory protein EJB00_05685 PF01551 Peptidase family M23 EJB00_05690 PF13603 Leucyl-tRNA synthetase, Domain 2 EJB00_05690 PF09334 tRNA synthetases class I (M) EJB00_05690 PF08264 Anticodon-binding domain of tRNA EJB00_05690 PF00133 tRNA synthetases class I (I, L, M and V) EJB00_05700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EJB00_05700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EJB00_05705 PF02441 Flavoprotein EJB00_05710 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EJB00_05715 PF00571 CBS domain EJB00_05715 PF03471 Transporter associated domain EJB00_05715 PF01595 Cyclin M transmembrane N-terminal domain EJB00_05720 PF00202 Aminotransferase class-III EJB00_05725 PF00334 Nucleoside diphosphate kinase EJB00_05730 PF01548 Transposase EJB00_05730 PF02371 Transposase IS116/IS110/IS902 family EJB00_05760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJB00_05780 PF00155 Aminotransferase class I and II EJB00_05790 PF09285 Elongation factor P, C-terminal EJB00_05790 PF01132 Elongation factor P (EF-P) OB domain EJB00_05790 PF08207 Elongation factor P (EF-P) KOW-like domain EJB00_05795 PF05239 PRC-barrel domain EJB00_05795 PF01782 RimM N-terminal domain EJB00_05805 PF00202 Aminotransferase class-III EJB00_05810 PF00989 PAS fold EJB00_05810 PF13188 PAS domain EJB00_05810 PF13426 PAS domain EJB00_05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJB00_05810 PF00512 His Kinase A (phospho-acceptor) domain EJB00_05820 PF00814 Glycoprotease family EJB00_05830 PF00005 ABC transporter EJB00_05830 PF00664 ABC transporter transmembrane region EJB00_05840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJB00_05840 PF00364 Biotin-requiring enzyme EJB00_05840 PF02817 e3 binding domain EJB00_05855 PF01434 Peptidase family M41 EJB00_05855 PF00004 ATPase family associated with various cellular activities (AAA) EJB00_05855 PF17862 AAA+ lid domain EJB00_05855 PF06480 FtsH Extracellular EJB00_05865 PF01171 PP-loop family EJB00_05870 PF00691 OmpA family EJB00_05895 PF00719 Inorganic pyrophosphatase EJB00_05905 PF09312 SurA N-terminal domain EJB00_05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJB00_05940 PF02401 LytB protein EJB00_05965 PF00436 Single-strand binding protein family EJB00_05970 PF00701 Dihydrodipicolinate synthetase family EJB00_05975 PF00107 Zinc-binding dehydrogenase EJB00_05975 PF08240 Alcohol dehydrogenase GroES-like domain EJB00_05985 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EJB00_05990 PF01027 Inhibitor of apoptosis-promoting Bax1 EJB00_05995 PF00266 Aminotransferase class-V EJB00_06000 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EJB00_06010 PF00005 ABC transporter EJB00_06015 PF01521 Iron-sulphur cluster biosynthesis EJB00_06020 PF01966 HD domain EJB00_06020 PF13286 Phosphohydrolase-associated domain EJB00_06025 PF01872 RibD C-terminal domain EJB00_06025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EJB00_06035 PF01509 TruB family pseudouridylate synthase (N terminal domain) EJB00_06035 PF16198 tRNA pseudouridylate synthase B C-terminal domain EJB00_06040 PF00312 Ribosomal protein S15 EJB00_06050 PF00834 Ribulose-phosphate 3 epimerase family EJB00_06065 PF00162 Phosphoglycerate kinase EJB00_06070 PF00464 Serine hydroxymethyltransferase EJB00_06085 PF00893 Small Multidrug Resistance protein EJB00_06100 PF01208 Uroporphyrinogen decarboxylase (URO-D)