locus-tag class description GQX67_00005 PF11638 DnaA N-terminal domain GQX67_00005 PF08299 Bacterial dnaA protein helix-turn-helix GQX67_00005 PF00308 Bacterial dnaA protein GQX67_00020 PF00925 GTP cyclohydrolase II GQX67_00025 PF04335 VirB8 protein GQX67_00040 PF00437 Type II/IV secretion system protein GQX67_00045 PF02534 Type IV secretory system Conjugative DNA transfer GQX67_00055 PF13847 Methyltransferase domain GQX67_00055 PF17827 PrmC N-terminal domain GQX67_00065 PF00164 Ribosomal protein S12/S23 GQX67_00070 PF00177 Ribosomal protein S7p/S5e GQX67_00075 PF00009 Elongation factor Tu GTP binding domain GQX67_00075 PF03764 Elongation factor G, domain IV GQX67_00075 PF14492 Elongation Factor G, domain II GQX67_00075 PF00679 Elongation factor G C-terminus GQX67_00075 PF03144 Elongation factor Tu domain 2 GQX67_00080 PF03143 Elongation factor Tu C-terminal domain GQX67_00080 PF00009 Elongation factor Tu GTP binding domain GQX67_00080 PF03144 Elongation factor Tu domain 2 GQX67_00095 PF02357 Transcription termination factor nusG GQX67_00095 PF00467 KOW motif GQX67_00100 PF00298 Ribosomal protein L11, RNA binding domain GQX67_00100 PF03946 Ribosomal protein L11, N-terminal domain GQX67_00105 PF00687 Ribosomal protein L1p/L10e family GQX67_00110 PF00466 Ribosomal protein L10 GQX67_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain GQX67_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain GQX67_00120 PF10385 RNA polymerase beta subunit external 1 domain GQX67_00120 PF04997 RNA polymerase Rpb1, domain 1 GQX67_00120 PF00623 RNA polymerase Rpb1, domain 2 GQX67_00120 PF04983 RNA polymerase Rpb1, domain 3 GQX67_00120 PF05000 RNA polymerase Rpb1, domain 4 GQX67_00120 PF04565 RNA polymerase Rpb2, domain 3 GQX67_00120 PF04998 RNA polymerase Rpb1, domain 5 GQX67_00120 PF04560 RNA polymerase Rpb2, domain 7 GQX67_00120 PF00562 RNA polymerase Rpb2, domain 6 GQX67_00120 PF04563 RNA polymerase beta subunit GQX67_00120 PF04561 RNA polymerase Rpb2, domain 2 GQX67_00125 PF01207 Dihydrouridine synthase (Dus) GQX67_00140 PF02403 Seryl-tRNA synthetase N-terminal domain GQX67_00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX67_00145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GQX67_00145 PF02843 Phosphoribosylglycinamide synthetase, C domain GQX67_00145 PF02844 Phosphoribosylglycinamide synthetase, N domain GQX67_00165 PF14572 Phosphoribosyl synthetase-associated domain GQX67_00165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GQX67_00170 PF02686 Glu-tRNAGln amidotransferase C subunit GQX67_00175 PF04052 TolB amino-terminal domain GQX67_00175 PF07676 WD40-like Beta Propeller Repeat GQX67_00180 PF12706 Beta-lactamase superfamily domain GQX67_00180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GQX67_00180 PF17770 Ribonuclease J C-terminal domain GQX67_00185 PF00684 DnaJ central domain GQX67_00185 PF01556 DnaJ C terminal domain GQX67_00185 PF00226 DnaJ domain GQX67_00245 PF00883 Cytosol aminopeptidase family, catalytic domain GQX67_00245 PF02789 Cytosol aminopeptidase family, N-terminal domain GQX67_00255 PF00216 Bacterial DNA-binding protein GQX67_00265 PF01551 Peptidase family M23 GQX67_00270 PF00133 tRNA synthetases class I (I, L, M and V) GQX67_00270 PF09334 tRNA synthetases class I (M) GQX67_00270 PF13603 Leucyl-tRNA synthetase, Domain 2 GQX67_00270 PF08264 Anticodon-binding domain of tRNA GQX67_00280 PF13276 HTH-like domain GQX67_00280 PF00665 Integrase core domain GQX67_00280 PF13333 Integrase core domain GQX67_00285 PF13276 HTH-like domain GQX67_00285 PF00665 Integrase core domain GQX67_00285 PF13333 Integrase core domain GQX67_00300 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GQX67_00310 PF00380 Ribosomal protein S9/S16 GQX67_00315 PF00572 Ribosomal protein L13 GQX67_00325 PF10691 Protein of unknown function (DUF2497) GQX67_00330 PF01728 FtsJ-like methyltransferase GQX67_00365 PF13276 HTH-like domain GQX67_00365 PF00665 Integrase core domain GQX67_00365 PF13333 Integrase core domain GQX67_00370 PF00665 Integrase core domain GQX67_00370 PF13276 HTH-like domain GQX67_00370 PF13333 Integrase core domain GQX67_00400 PF02355 Protein export membrane protein GQX67_00405 PF00665 Integrase core domain GQX67_00405 PF13276 HTH-like domain GQX67_00405 PF13333 Integrase core domain GQX67_00420 PF00478 IMP dehydrogenase / GMP reductase domain GQX67_00420 PF00571 CBS domain GQX67_00425 PF00398 Ribosomal RNA adenine dimethylase GQX67_00435 PF00121 Triosephosphate isomerase GQX67_00440 PF02481 DNA recombination-mediator protein A GQX67_00440 PF17782 DprA winged helix domain GQX67_00445 PF00037 4Fe-4S binding domain GQX67_00445 PF11953 Domain of unknown function (DUF3470) GQX67_00455 PF01820 D-ala D-ala ligase N-terminus GQX67_00455 PF07478 D-ala D-ala ligase C-terminus GQX67_00460 PF08478 POTRA domain, FtsQ-type GQX67_00460 PF03799 Cell division protein FtsQ GQX67_00465 PF00768 D-alanyl-D-alanine carboxypeptidase GQX67_00465 PF07943 Penicillin-binding protein 5, C-terminal domain GQX67_00470 PF00893 Small Multidrug Resistance protein GQX67_00475 PF00893 Small Multidrug Resistance protein GQX67_00485 PF14850 DNA-binding domain of Proline dehydrogenase GQX67_00485 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GQX67_00485 PF00171 Aldehyde dehydrogenase family GQX67_00485 PF01619 Proline dehydrogenase GQX67_00490 PF00330 Aconitase family (aconitate hydratase) GQX67_00490 PF00694 Aconitase C-terminal domain GQX67_00495 PF02556 Preprotein translocase subunit SecB GQX67_00505 PF00929 Exonuclease GQX67_00510 PF02630 SCO1/SenC GQX67_00520 PF00204 DNA gyrase B GQX67_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX67_00520 PF00986 DNA gyrase B subunit, carboxyl terminus GQX67_00520 PF01751 Toprim domain GQX67_00535 PF13333 Integrase core domain GQX67_00535 PF00665 Integrase core domain GQX67_00535 PF13276 HTH-like domain GQX67_00545 PF01609 Transposase DDE domain GQX67_00550 PF04551 GcpE protein GQX67_00565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GQX67_00565 PF17854 FtsK alpha domain GQX67_00565 PF09397 Ftsk gamma domain GQX67_00565 PF01580 FtsK/SpoIIIE family GQX67_00570 PF02325 YGGT family GQX67_00620 PF00677 Lumazine binding domain GQX67_00630 PF01409 tRNA synthetases class II core domain (F) GQX67_00630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GQX67_00635 PF12804 MobA-like NTP transferase domain GQX67_00635 PF14602 Hexapeptide repeat of succinyl-transferase GQX67_00635 PF00132 Bacterial transferase hexapeptide (six repeats) GQX67_00640 PF00829 Ribosomal prokaryotic L21 protein GQX67_00645 PF01016 Ribosomal L27 protein GQX67_00655 PF00438 S-adenosylmethionine synthetase, N-terminal domain GQX67_00655 PF02772 S-adenosylmethionine synthetase, central domain GQX67_00655 PF02773 S-adenosylmethionine synthetase, C-terminal domain GQX67_00665 PF03070 TENA/THI-4/PQQC family GQX67_00675 PF00510 Cytochrome c oxidase subunit III GQX67_00680 PF02075 Crossover junction endodeoxyribonuclease RuvC GQX67_00685 PF03652 Holliday junction resolvase GQX67_00695 PF02637 GatB domain GQX67_00695 PF02934 GatB/GatE catalytic domain GQX67_00710 PF09190 DALR domain GQX67_00710 PF01406 tRNA synthetases class I (C) catalytic domain GQX67_00715 PF06055 Exopolysaccharide synthesis, ExoD GQX67_00725 PF02416 mttA/Hcf106 family GQX67_00730 PF00005 ABC transporter GQX67_00730 PF08402 TOBE domain GQX67_00740 PF08459 UvrC Helix-hairpin-helix N-terminal GQX67_00740 PF02151 UvrB/uvrC motif GQX67_00740 PF01541 GIY-YIG catalytic domain GQX67_00745 PF05746 DALR anticodon binding domain GQX67_00745 PF02092 Glycyl-tRNA synthetase beta subunit GQX67_00750 PF02091 Glycyl-tRNA synthetase alpha subunit GQX67_00760 PF00490 Delta-aminolevulinic acid dehydratase GQX67_00765 PF00146 NADH dehydrogenase GQX67_00770 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GQX67_00770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GQX67_00770 PF00384 Molybdopterin oxidoreductase GQX67_00785 PF03167 Uracil DNA glycosylase superfamily GQX67_00790 PF01327 Polypeptide deformylase GQX67_00795 PF02491 SHS2 domain inserted in FTSA GQX67_00800 PF00557 Metallopeptidase family M24 GQX67_00805 PF07690 Major Facilitator Superfamily GQX67_00805 PF00083 Sugar (and other) transporter GQX67_00810 PF01795 MraW methylase family GQX67_00825 PF14693 Ribosomal protein TL5, C-terminal domain GQX67_00825 PF01386 Ribosomal L25p family GQX67_00830 PF01195 Peptidyl-tRNA hydrolase GQX67_00840 PF01494 FAD binding domain GQX67_00850 PF10609 NUBPL iron-transfer P-loop NTPase GQX67_00875 PF13276 HTH-like domain GQX67_00875 PF00665 Integrase core domain GQX67_00875 PF13333 Integrase core domain GQX67_00880 PF13333 Integrase core domain GQX67_00880 PF13276 HTH-like domain GQX67_00880 PF00665 Integrase core domain GQX67_00895 PF01121 Dephospho-CoA kinase GQX67_00900 PF01612 3'-5' exonuclease GQX67_00900 PF00570 HRDC domain GQX67_00905 PF05192 MutS domain III GQX67_00905 PF05190 MutS family domain IV GQX67_00905 PF05188 MutS domain II GQX67_00905 PF00488 MutS domain V GQX67_00905 PF01624 MutS domain I GQX67_00920 PF03471 Transporter associated domain GQX67_00920 PF03741 Integral membrane protein TerC family GQX67_00920 PF00571 CBS domain GQX67_00925 PF02540 NAD synthase GQX67_00925 PF00958 GMP synthase C terminal domain GQX67_00925 PF00117 Glutamine amidotransferase class-I GQX67_00930 PF03477 ATP cone domain GQX67_00930 PF02867 Ribonucleotide reductase, barrel domain GQX67_00930 PF00317 Ribonucleotide reductase, all-alpha domain GQX67_00935 PF01209 ubiE/COQ5 methyltransferase family GQX67_00960 PF00468 Ribosomal protein L34 GQX67_00965 PF00528 Binding-protein-dependent transport system inner membrane component GQX67_00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQX67_00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX67_00975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GQX67_00985 PF00665 Integrase core domain GQX67_00985 PF13276 HTH-like domain GQX67_00985 PF13333 Integrase core domain GQX67_01000 PF00596 Class II Aldolase and Adducin N-terminal domain GQX67_01010 PF00814 Glycoprotease family GQX67_01020 PF00268 Ribonucleotide reductase, small chain GQX67_01045 PF06250 YhcG PDDEXK nuclease domain GQX67_01045 PF17761 DUF1016 N-terminal domain GQX67_01050 PF02565 Recombination protein O C terminal GQX67_01050 PF11967 Recombination protein O N terminal GQX67_01060 PF00990 Diguanylate cyclase, GGDEF domain GQX67_01060 PF00072 Response regulator receiver domain GQX67_01070 PF05088 Bacterial NAD-glutamate dehydrogenase GQX67_01075 PF17871 AAA lid domain GQX67_01075 PF02861 Clp amino terminal domain, pathogenicity island component GQX67_01075 PF10431 C-terminal, D2-small domain, of ClpB protein GQX67_01075 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_01075 PF07724 AAA domain (Cdc48 subfamily) GQX67_01090 PF03144 Elongation factor Tu domain 2 GQX67_01090 PF00679 Elongation factor G C-terminus GQX67_01090 PF00009 Elongation factor Tu GTP binding domain GQX67_01095 PF00156 Phosphoribosyl transferase domain GQX67_01100 PF00375 Sodium:dicarboxylate symporter family GQX67_01105 PF01979 Amidohydrolase family GQX67_01115 PF01578 Cytochrome C assembly protein GQX67_01115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GQX67_01130 PF02355 Protein export membrane protein GQX67_01130 PF07549 SecD/SecF GG Motif GQX67_01140 PF14849 YidC periplasmic domain GQX67_01140 PF02096 60Kd inner membrane protein GQX67_01145 PF00885 6,7-dimethyl-8-ribityllumazine synthase GQX67_01150 PF01029 NusB family GQX67_01170 PF00692 dUTPase GQX67_01175 PF08264 Anticodon-binding domain of tRNA GQX67_01175 PF00133 tRNA synthetases class I (I, L, M and V) GQX67_01180 PF00696 Amino acid kinase family GQX67_01185 PF01926 50S ribosome-binding GTPase GQX67_01190 PF03462 PCRF domain GQX67_01190 PF00472 RF-1 domain GQX67_01195 PF07690 Major Facilitator Superfamily GQX67_01220 PF13333 Integrase core domain GQX67_01220 PF00665 Integrase core domain GQX67_01220 PF13276 HTH-like domain GQX67_01225 PF02646 RmuC family GQX67_01230 PF01609 Transposase DDE domain GQX67_01235 PF00872 Transposase, Mutator family GQX67_01245 PF08671 Anti-repressor SinI GQX67_01245 PF01381 Helix-turn-helix GQX67_01280 PF18755 Restriction Enzyme Adenine Methylase Associated GQX67_01280 PF01555 DNA methylase GQX67_01325 PF02371 Transposase IS116/IS110/IS902 family GQX67_01325 PF01548 Transposase GQX67_01405 PF00239 Resolvase, N terminal domain GQX67_01405 PF02796 Helix-turn-helix domain of resolvase GQX67_01450 PF01527 Transposase GQX67_01460 PF00665 Integrase core domain GQX67_01460 PF13333 Integrase core domain GQX67_01460 PF13276 HTH-like domain GQX67_01465 PF13333 Integrase core domain GQX67_01465 PF00665 Integrase core domain GQX67_01465 PF13276 HTH-like domain GQX67_01470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GQX67_01470 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GQX67_01475 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQX67_01480 PF01040 UbiA prenyltransferase family GQX67_01485 PF00075 RNase H GQX67_01495 PF00118 TCP-1/cpn60 chaperonin family GQX67_01500 PF00166 Chaperonin 10 Kd subunit GQX67_01505 PF01571 Aminomethyltransferase folate-binding domain GQX67_01510 PF01368 DHH family GQX67_01510 PF02272 DHHA1 domain GQX67_01510 PF17768 RecJ OB domain GQX67_01525 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQX67_01535 PF02190 ATP-dependent protease La (LON) substrate-binding domain GQX67_01535 PF05362 Lon protease (S16) C-terminal proteolytic domain GQX67_01535 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_01540 PF07724 AAA domain (Cdc48 subfamily) GQX67_01540 PF10431 C-terminal, D2-small domain, of ClpB protein GQX67_01540 PF06689 ClpX C4-type zinc finger GQX67_01545 PF00574 Clp protease GQX67_01550 PF05697 Bacterial trigger factor protein (TF) GQX67_01550 PF05698 Bacterial trigger factor protein (TF) C-terminus GQX67_01550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQX67_01560 PF04972 BON domain GQX67_01565 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GQX67_01565 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GQX67_01570 PF03033 Glycosyltransferase family 28 N-terminal domain GQX67_01570 PF04101 Glycosyltransferase family 28 C-terminal domain GQX67_01580 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_01580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQX67_01585 PF01548 Transposase GQX67_01585 PF02371 Transposase IS116/IS110/IS902 family GQX67_01610 PF01235 Sodium:alanine symporter family GQX67_01625 PF02545 Maf-like protein GQX67_01630 PF01176 Translation initiation factor 1A / IF-1 GQX67_01645 PF00709 Adenylosuccinate synthetase GQX67_01660 PF01578 Cytochrome C assembly protein GQX67_01665 PF03618 Kinase/pyrophosphorylase GQX67_01670 PF00444 Ribosomal protein L36 GQX67_01690 PF13276 HTH-like domain GQX67_01690 PF00665 Integrase core domain GQX67_01690 PF13333 Integrase core domain GQX67_01695 PF00665 Integrase core domain GQX67_01695 PF13276 HTH-like domain GQX67_01695 PF13333 Integrase core domain GQX67_01700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQX67_01705 PF02661 Fic/DOC family GQX67_01705 PF13784 Fic/DOC family N-terminal GQX67_01710 PF08275 DNA primase catalytic core, N-terminal domain GQX67_01710 PF01807 CHC2 zinc finger GQX67_01710 PF13662 Toprim domain GQX67_01720 PF08241 Methyltransferase domain GQX67_01730 PF08264 Anticodon-binding domain of tRNA GQX67_01730 PF09334 tRNA synthetases class I (M) GQX67_01740 PF00772 DnaB-like helicase N terminal domain GQX67_01740 PF03796 DnaB-like helicase C terminal domain GQX67_01750 PF06271 RDD family GQX67_01755 PF04002 RadC-like JAB domain GQX67_01765 PF00580 UvrD/REP helicase N-terminal domain GQX67_01765 PF13361 UvrD-like helicase C-terminal domain GQX67_01765 PF12705 PD-(D/E)XK nuclease superfamily GQX67_01770 PF08544 GHMP kinases C terminal GQX67_01770 PF00288 GHMP kinases N terminal domain GQX67_01780 PF00950 ABC 3 transport family GQX67_01805 PF01113 Dihydrodipicolinate reductase, N-terminus GQX67_01805 PF05173 Dihydrodipicolinate reductase, C-terminus GQX67_01810 PF00005 ABC transporter GQX67_01825 PF13333 Integrase core domain GQX67_01825 PF00665 Integrase core domain GQX67_01825 PF13276 HTH-like domain GQX67_01830 PF13276 HTH-like domain GQX67_01830 PF00665 Integrase core domain GQX67_01830 PF13333 Integrase core domain GQX67_01840 PF00571 CBS domain GQX67_01840 PF01769 Divalent cation transporter GQX67_01840 PF03448 MgtE intracellular N domain GQX67_01860 PF00692 dUTPase GQX67_01885 PF07690 Major Facilitator Superfamily GQX67_01900 PF02780 Transketolase, C-terminal domain GQX67_01900 PF02779 Transketolase, pyrimidine binding domain GQX67_01900 PF00456 Transketolase, thiamine diphosphate binding domain GQX67_01905 PF00163 Ribosomal protein S4/S9 N-terminal domain GQX67_01905 PF01479 S4 domain GQX67_01915 PF04384 Iron-sulphur cluster assembly GQX67_01925 PF00830 Ribosomal L28 family GQX67_01930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GQX67_01930 PF04055 Radical SAM superfamily GQX67_01935 PF01209 ubiE/COQ5 methyltransferase family GQX67_01940 PF01098 Cell cycle protein GQX67_01955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX67_01970 PF00664 ABC transporter transmembrane region GQX67_01970 PF00005 ABC transporter GQX67_01980 PF03485 Arginyl tRNA synthetase N terminal domain GQX67_01980 PF05746 DALR anticodon binding domain GQX67_01980 PF00750 tRNA synthetases class I (R) GQX67_02005 PF00005 ABC transporter GQX67_02015 PF02938 GAD domain GQX67_02015 PF00152 tRNA synthetases class II (D, K and N) GQX67_02015 PF01336 OB-fold nucleic acid binding domain GQX67_02020 PF08946 Osmosensory transporter coiled coil GQX67_02020 PF00083 Sugar (and other) transporter GQX67_02025 PF01479 S4 domain GQX67_02025 PF00849 RNA pseudouridylate synthase GQX67_02030 PF00676 Dehydrogenase E1 component GQX67_02035 PF03653 Uncharacterised protein family (UPF0093) GQX67_02045 PF01938 TRAM domain GQX67_02045 PF04055 Radical SAM superfamily GQX67_02045 PF00919 Uncharacterized protein family UPF0004 GQX67_02055 PF08264 Anticodon-binding domain of tRNA GQX67_02055 PF00133 tRNA synthetases class I (I, L, M and V) GQX67_02065 PF03484 tRNA synthetase B5 domain GQX67_02065 PF03483 B3/4 domain GQX67_02065 PF01588 Putative tRNA binding domain GQX67_02065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GQX67_02065 PF03147 Ferredoxin-fold anticodon binding domain GQX67_02075 PF00119 ATP synthase A chain GQX67_02080 PF00137 ATP synthase subunit C GQX67_02100 PF02628 Cytochrome oxidase assembly protein GQX67_02105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQX67_02105 PF00289 Biotin carboxylase, N-terminal domain GQX67_02105 PF00364 Biotin-requiring enzyme GQX67_02105 PF18140 Propionyl-coenzyme A carboxylase BT domain GQX67_02105 PF02785 Biotin carboxylase C-terminal domain GQX67_02115 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQX67_02120 PF00890 FAD binding domain GQX67_02120 PF02910 Fumarate reductase flavoprotein C-term GQX67_02130 PF00625 Guanylate kinase GQX67_02150 PF01926 50S ribosome-binding GTPase GQX67_02150 PF06071 Protein of unknown function (DUF933) GQX67_02160 PF13735 tRNA nucleotidyltransferase domain 2 putative GQX67_02160 PF01743 Poly A polymerase head domain GQX67_02160 PF12627 Probable RNA and SrmB- binding site of polymerase A GQX67_02185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQX67_02185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQX67_02190 PF00902 Sec-independent protein translocase protein (TatC) GQX67_02195 PF01316 Arginine repressor, DNA binding domain GQX67_02195 PF02863 Arginine repressor, C-terminal domain GQX67_02200 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQX67_02205 PF00528 Binding-protein-dependent transport system inner membrane component GQX67_02210 PF00005 ABC transporter GQX67_02235 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GQX67_02250 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_02250 PF17862 AAA+ lid domain GQX67_02250 PF06480 FtsH Extracellular GQX67_02250 PF01434 Peptidase family M41 GQX67_02255 PF00133 tRNA synthetases class I (I, L, M and V) GQX67_02255 PF08264 Anticodon-binding domain of tRNA GQX67_02275 PF00117 Glutamine amidotransferase class-I GQX67_02275 PF06418 CTP synthase N-terminus GQX67_02280 PF14437 MafB19-like deaminase GQX67_02285 PF00083 Sugar (and other) transporter GQX67_02285 PF07690 Major Facilitator Superfamily GQX67_02295 PF17862 AAA+ lid domain GQX67_02295 PF06480 FtsH Extracellular GQX67_02295 PF01434 Peptidase family M41 GQX67_02295 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_02300 PF02779 Transketolase, pyrimidine binding domain GQX67_02300 PF00364 Biotin-requiring enzyme GQX67_02300 PF02780 Transketolase, C-terminal domain GQX67_02310 PF00679 Elongation factor G C-terminus GQX67_02310 PF14492 Elongation Factor G, domain II GQX67_02310 PF00009 Elongation factor Tu GTP binding domain GQX67_02310 PF03144 Elongation factor Tu domain 2 GQX67_02310 PF06421 GTP-binding protein LepA C-terminus GQX67_02335 PF08525 Opacity-associated protein A N-terminal motif GQX67_02335 PF01551 Peptidase family M23 GQX67_02335 PF01476 LysM domain GQX67_02340 PF01709 Transcriptional regulator GQX67_02345 PF13525 Outer membrane lipoprotein GQX67_02355 PF01066 CDP-alcohol phosphatidyltransferase GQX67_02360 PF01515 Phosphate acetyl/butaryl transferase GQX67_02360 PF00390 Malic enzyme, N-terminal domain GQX67_02360 PF03949 Malic enzyme, NAD binding domain GQX67_02375 PF00462 Glutaredoxin GQX67_02380 PF10415 Fumarase C C-terminus GQX67_02380 PF00206 Lyase GQX67_02390 PF01018 GTP1/OBG GQX67_02390 PF01926 50S ribosome-binding GTPase GQX67_02395 PF03952 Enolase, N-terminal domain GQX67_02395 PF00113 Enolase, C-terminal TIM barrel domain GQX67_02400 PF02875 Mur ligase family, glutamate ligase domain GQX67_02400 PF08245 Mur ligase middle domain GQX67_02400 PF01225 Mur ligase family, catalytic domain GQX67_02405 PF03330 Lytic transglycolase GQX67_02425 PF00919 Uncharacterized protein family UPF0004 GQX67_02425 PF04055 Radical SAM superfamily GQX67_02430 PF01425 Amidase GQX67_02450 PF08676 MutL C terminal dimerisation domain GQX67_02450 PF01119 DNA mismatch repair protein, C-terminal domain GQX67_02500 PF01527 Transposase GQX67_02510 PF13276 HTH-like domain GQX67_02510 PF13333 Integrase core domain GQX67_02510 PF00665 Integrase core domain GQX67_02515 PF00665 Integrase core domain GQX67_02515 PF13333 Integrase core domain GQX67_02515 PF13276 HTH-like domain GQX67_02535 PF01467 Cytidylyltransferase-like GQX67_02550 PF01255 Putative undecaprenyl diphosphate synthase GQX67_02560 PF01765 Ribosome recycling factor GQX67_02565 PF00696 Amino acid kinase family GQX67_02570 PF00889 Elongation factor TS GQX67_02575 PF00318 Ribosomal protein S2 GQX67_02585 PF02699 Preprotein translocase subunit GQX67_02590 PF01380 SIS domain GQX67_02620 PF01565 FAD binding domain GQX67_02620 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GQX67_02625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GQX67_02625 PF03900 Porphobilinogen deaminase, C-terminal domain GQX67_02630 PF02817 e3 binding domain GQX67_02630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQX67_02630 PF00364 Biotin-requiring enzyme GQX67_02655 PF07517 SecA DEAD-like domain GQX67_02655 PF07516 SecA Wing and Scaffold domain GQX67_02655 PF01043 SecA preprotein cross-linking domain GQX67_02655 PF02810 SEC-C motif GQX67_02665 PF00923 Transaldolase/Fructose-6-phosphate aldolase GQX67_02685 PF13276 HTH-like domain GQX67_02685 PF00665 Integrase core domain GQX67_02685 PF13333 Integrase core domain GQX67_02695 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GQX67_02695 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GQX67_02700 PF02441 Flavoprotein GQX67_02705 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) GQX67_02710 PF03471 Transporter associated domain GQX67_02710 PF00571 CBS domain GQX67_02710 PF01595 Cyclin M transmembrane N-terminal domain GQX67_02715 PF00202 Aminotransferase class-III GQX67_02720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GQX67_02740 PF01609 Transposase DDE domain GQX67_02750 PF01734 Patatin-like phospholipase GQX67_02885 PF01555 DNA methylase GQX67_02885 PF18755 Restriction Enzyme Adenine Methylase Associated GQX67_02895 PF00023 Ankyrin repeat GQX67_02960 PF00271 Helicase conserved C-terminal domain GQX67_02960 PF12419 SNF2 Helicase protein GQX67_02960 PF00176 SNF2 family N-terminal domain GQX67_02965 PF12804 MobA-like NTP transferase domain GQX67_02965 PF00132 Bacterial transferase hexapeptide (six repeats) GQX67_02965 PF14602 Hexapeptide repeat of succinyl-transferase GQX67_02970 PF16363 GDP-mannose 4,6 dehydratase GQX67_02990 PF00664 ABC transporter transmembrane region GQX67_02990 PF00005 ABC transporter GQX67_02995 PF01212 Beta-eliminating lyase GQX67_03000 PF01212 Beta-eliminating lyase GQX67_03010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GQX67_03010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GQX67_03010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GQX67_03015 PF00892 EamA-like transporter family GQX67_03035 PF04002 RadC-like JAB domain GQX67_03040 PF01381 Helix-turn-helix GQX67_03075 PF00239 Resolvase, N terminal domain GQX67_03075 PF02796 Helix-turn-helix domain of resolvase GQX67_03145 PF13276 HTH-like domain GQX67_03145 PF13333 Integrase core domain GQX67_03145 PF00665 Integrase core domain GQX67_03155 PF01527 Transposase GQX67_03160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQX67_03160 PF00529 HlyD membrane-fusion protein of T1SS GQX67_03180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GQX67_03180 PF00925 GTP cyclohydrolase II GQX67_03185 PF01272 Transcription elongation factor, GreA/GreB, C-term GQX67_03185 PF03449 Transcription elongation factor, N-terminal GQX67_03190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX67_03190 PF00306 ATP synthase alpha/beta chain, C terminal domain GQX67_03190 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQX67_03195 PF00213 ATP synthase delta (OSCP) subunit GQX67_03200 PF02021 Uncharacterised protein family UPF0102 GQX67_03205 PF01196 Ribosomal protein L17 GQX67_03210 PF01000 RNA polymerase Rpb3/RpoA insert domain GQX67_03210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GQX67_03210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GQX67_03215 PF00411 Ribosomal protein S11 GQX67_03220 PF00416 Ribosomal protein S13/S18 GQX67_03230 PF00344 SecY translocase GQX67_03235 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GQX67_03240 PF00333 Ribosomal protein S5, N-terminal domain GQX67_03240 PF03719 Ribosomal protein S5, C-terminal domain GQX67_03245 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GQX67_03250 PF00347 Ribosomal protein L6 GQX67_03255 PF00410 Ribosomal protein S8 GQX67_03260 PF00253 Ribosomal protein S14p/S29e GQX67_03265 PF00281 Ribosomal protein L5 GQX67_03265 PF00673 ribosomal L5P family C-terminus GQX67_03270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GQX67_03275 PF00238 Ribosomal protein L14p/L23e GQX67_03280 PF00366 Ribosomal protein S17 GQX67_03285 PF00831 Ribosomal L29 protein GQX67_03290 PF00252 Ribosomal protein L16p/L10e GQX67_03295 PF07650 KH domain GQX67_03295 PF00189 Ribosomal protein S3, C-terminal domain GQX67_03300 PF00237 Ribosomal protein L22p/L17e GQX67_03305 PF00203 Ribosomal protein S19 GQX67_03310 PF03947 Ribosomal Proteins L2, C-terminal domain GQX67_03310 PF00181 Ribosomal Proteins L2, RNA binding domain GQX67_03315 PF00276 Ribosomal protein L23 GQX67_03320 PF00573 Ribosomal protein L4/L1 family GQX67_03325 PF00297 Ribosomal protein L3 GQX67_03330 PF00338 Ribosomal protein S10p/S20e GQX67_03335 PF00009 Elongation factor Tu GTP binding domain GQX67_03335 PF03144 Elongation factor Tu domain 2 GQX67_03335 PF03143 Elongation factor Tu C-terminal domain GQX67_03350 PF00117 Glutamine amidotransferase class-I GQX67_03350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GQX67_03365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GQX67_03375 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GQX67_03375 PF02896 PEP-utilising enzyme, TIM barrel domain GQX67_03375 PF00391 PEP-utilising enzyme, mobile domain GQX67_03390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX67_03400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GQX67_03400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GQX67_03400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GQX67_03400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GQX67_03420 PF02371 Transposase IS116/IS110/IS902 family GQX67_03420 PF01548 Transposase GQX67_03425 PF00814 Glycoprotease family GQX67_03440 PF00266 Aminotransferase class-V GQX67_03445 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GQX67_03455 PF00005 ABC transporter GQX67_03460 PF01521 Iron-sulphur cluster biosynthesis GQX67_03465 PF01966 HD domain GQX67_03465 PF13286 Phosphohydrolase-associated domain GQX67_03470 PF01872 RibD C-terminal domain GQX67_03470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GQX67_03480 PF00834 Ribulose-phosphate 3 epimerase family GQX67_03490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GQX67_03490 PF00132 Bacterial transferase hexapeptide (six repeats) GQX67_03490 PF14602 Hexapeptide repeat of succinyl-transferase GQX67_03515 PF00905 Penicillin binding protein transpeptidase domain GQX67_03515 PF03717 Penicillin-binding Protein dimerisation domain GQX67_03520 PF00457 Glycosyl hydrolases family 11 GQX67_03520 PF03422 Carbohydrate binding module (family 6) GQX67_03520 PF01522 Polysaccharide deacetylase GQX67_03525 PF13335 Magnesium chelatase, subunit ChlI C-terminal GQX67_03525 PF01078 Magnesium chelatase, subunit ChlI GQX67_03535 PF12327 FtsZ family, C-terminal domain GQX67_03535 PF00091 Tubulin/FtsZ family, GTPase domain GQX67_03550 PF02130 Uncharacterized protein family UPF0054 GQX67_03555 PF13085 2Fe-2S iron-sulfur cluster binding domain GQX67_03570 PF04608 Phosphatidylglycerophosphatase A GQX67_03575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GQX67_03575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GQX67_03580 PF00072 Response regulator receiver domain GQX67_03580 PF00486 Transcriptional regulatory protein, C terminal GQX67_03600 PF01702 Queuine tRNA-ribosyltransferase GQX67_03610 PF05193 Peptidase M16 inactive domain GQX67_03610 PF00675 Insulinase (Peptidase family M16) GQX67_03615 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GQX67_03615 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GQX67_03620 PF01654 Cytochrome bd terminal oxidase subunit I GQX67_03625 PF02322 Cytochrome bd terminal oxidase subunit II GQX67_03630 PF07650 KH domain GQX67_03630 PF01926 50S ribosome-binding GTPase GQX67_03675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQX67_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_03680 PF02899 Phage integrase, N-terminal SAM-like domain GQX67_03680 PF00589 Phage integrase family GQX67_03695 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_03700 PF00578 AhpC/TSA family GQX67_03700 PF10417 C-terminal domain of 1-Cys peroxiredoxin GQX67_03710 PF00462 Glutaredoxin GQX67_03715 PF06574 FAD synthetase GQX67_03715 PF01687 Riboflavin kinase GQX67_03720 PF01252 Signal peptidase (SPase) II GQX67_03725 PF00675 Insulinase (Peptidase family M16) GQX67_03725 PF05193 Peptidase M16 inactive domain GQX67_03735 PF00551 Formyl transferase GQX67_03755 PF01668 SmpB protein GQX67_03760 PF01790 Prolipoprotein diacylglyceryl transferase GQX67_03765 PF00664 ABC transporter transmembrane region GQX67_03765 PF00005 ABC transporter GQX67_03790 PF00436 Single-strand binding protein family GQX67_03795 PF00701 Dihydrodipicolinate synthetase family GQX67_03800 PF12826 Helix-hairpin-helix motif GQX67_03800 PF03120 NAD-dependent DNA ligase OB-fold domain GQX67_03800 PF01653 NAD-dependent DNA ligase adenylation domain GQX67_03800 PF00533 BRCA1 C Terminus (BRCT) domain GQX67_03800 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GQX67_03805 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQX67_03810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GQX67_03810 PF07733 Bacterial DNA polymerase III alpha NTPase domain GQX67_03810 PF02811 PHP domain GQX67_03810 PF14579 Helix-hairpin-helix motif GQX67_03815 PF01250 Ribosomal protein S6 GQX67_03820 PF01084 Ribosomal protein S18 GQX67_03825 PF03948 Ribosomal protein L9, C-terminal domain GQX67_03825 PF01281 Ribosomal protein L9, N-terminal domain GQX67_03840 PF10397 Adenylosuccinate lyase C-terminus GQX67_03840 PF00206 Lyase GQX67_03850 PF13685 Iron-containing alcohol dehydrogenase GQX67_03855 PF07687 Peptidase dimerisation domain GQX67_03855 PF01546 Peptidase family M20/M25/M40 GQX67_03860 PF00633 Helix-hairpin-helix motif GQX67_03860 PF00730 HhH-GPD superfamily base excision DNA repair protein GQX67_03860 PF10576 Iron-sulfur binding domain of endonuclease III GQX67_03870 PF00180 Isocitrate/isopropylmalate dehydrogenase GQX67_03870 PF18324 Hypothetical protein TT1725 GQX67_03885 PF07497 Rho termination factor, RNA-binding domain GQX67_03885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX67_03885 PF07498 Rho termination factor, N-terminal domain GQX67_03895 PF00639 PPIC-type PPIASE domain GQX67_03900 PF00886 Ribosomal protein S16 GQX67_03905 PF00348 Polyprenyl synthetase GQX67_03910 PF01025 GrpE GQX67_03915 PF00579 tRNA synthetases class I (W and Y) GQX67_03925 PF00034 Cytochrome c GQX67_03950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX67_03950 PF03129 Anticodon binding domain GQX67_03955 PF01648 4'-phosphopantetheinyl transferase superfamily GQX67_03965 PF13244 Domain of unknown function (DUF4040) GQX67_03965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX67_03965 PF00361 Proton-conducting membrane transporter GQX67_03985 PF01300 Telomere recombination GQX67_04005 PF00270 DEAD/DEAH box helicase GQX67_04005 PF17191 RecG wedge domain GQX67_04005 PF00271 Helicase conserved C-terminal domain GQX67_04050 PF01145 SPFH domain / Band 7 family GQX67_04055 PF01145 SPFH domain / Band 7 family GQX67_04060 PF13180 PDZ domain GQX67_04085 PF12344 Ultra-violet resistance protein B GQX67_04085 PF17757 UvrB interaction domain GQX67_04085 PF00271 Helicase conserved C-terminal domain GQX67_04085 PF02151 UvrB/uvrC motif GQX67_04085 PF04851 Type III restriction enzyme, res subunit GQX67_04100 PF01548 Transposase GQX67_04100 PF02371 Transposase IS116/IS110/IS902 family GQX67_04105 PF03918 Cytochrome C biogenesis protein GQX67_04115 PF00111 2Fe-2S iron-sulfur cluster binding domain GQX67_04125 PF08245 Mur ligase middle domain GQX67_04150 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX67_04155 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX67_04160 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX67_04165 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX67_04170 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GQX67_04180 PF01921 tRNA synthetases class I (K) GQX67_04195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQX67_04195 PF02272 DHHA1 domain GQX67_04195 PF01411 tRNA synthetases class II (A) GQX67_04205 PF01632 Ribosomal protein L35 GQX67_04210 PF00453 Ribosomal protein L20 GQX67_04215 PF02911 Formyl transferase, C-terminal domain GQX67_04215 PF00551 Formyl transferase GQX67_04220 PF02142 MGS-like domain GQX67_04220 PF01808 AICARFT/IMPCHase bienzyme GQX67_04230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GQX67_04230 PF01676 Metalloenzyme superfamily GQX67_04235 PF00698 Acyl transferase domain GQX67_04240 PF01197 Ribosomal protein L31 GQX67_04245 PF01513 ATP-NAD kinase GQX67_04260 PF13276 HTH-like domain GQX67_04260 PF00665 Integrase core domain GQX67_04260 PF13333 Integrase core domain GQX67_04300 PF00085 Thioredoxin GQX67_04310 PF03070 TENA/THI-4/PQQC family GQX67_04325 PF00186 Dihydrofolate reductase GQX67_04335 PF18073 Rubredoxin metal binding domain GQX67_04340 PF00448 SRP54-type protein, GTPase domain GQX67_04340 PF02881 SRP54-type protein, helical bundle domain GQX67_04345 PF01592 NifU-like N terminal domain GQX67_04350 PF01521 Iron-sulphur cluster biosynthesis GQX67_04355 PF07743 HSCB C-terminal oligomerisation domain GQX67_04360 PF00012 Hsp70 protein GQX67_04365 PF10502 Signal peptidase, peptidase S26 GQX67_04370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GQX67_04370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GQX67_04420 PF01509 TruB family pseudouridylate synthase (N terminal domain) GQX67_04420 PF16198 tRNA pseudouridylate synthase B C-terminal domain GQX67_04425 PF00312 Ribosomal protein S15 GQX67_04430 PF00575 S1 RNA binding domain GQX67_04430 PF01138 3' exoribonuclease family, domain 1 GQX67_04430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GQX67_04430 PF00013 KH domain GQX67_04430 PF03725 3' exoribonuclease family, domain 2 GQX67_04460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GQX67_04460 PF02769 AIR synthase related protein, C-terminal domain GQX67_04460 PF00586 AIR synthase related protein, N-terminal domain GQX67_04475 PF17755 UvrA DNA-binding domain GQX67_04475 PF17760 UvrA interaction domain GQX67_04505 PF02875 Mur ligase family, glutamate ligase domain GQX67_04505 PF08245 Mur ligase middle domain GQX67_04510 PF01053 Cys/Met metabolism PLP-dependent enzyme GQX67_04520 PF00012 Hsp70 protein GQX67_04525 PF10150 Ribonuclease E/G family GQX67_04525 PF00575 S1 RNA binding domain GQX67_04525 PF12111 Polyribonucleotide phosphorylase C terminal GQX67_04530 PF00471 Ribosomal protein L33 GQX67_04555 PF01297 Zinc-uptake complex component A periplasmic GQX67_04560 PF00005 ABC transporter GQX67_04565 PF03109 ABC1 family GQX67_04615 PF00107 Zinc-binding dehydrogenase GQX67_04615 PF08240 Alcohol dehydrogenase GroES-like domain GQX67_04620 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GQX67_04625 PF01027 Inhibitor of apoptosis-promoting Bax1 GQX67_04630 PF08032 RNA 2'-O ribose methyltransferase substrate binding GQX67_04630 PF00588 SpoU rRNA Methylase family GQX67_04640 PF02774 Semialdehyde dehydrogenase, dimerisation domain GQX67_04640 PF01118 Semialdehyde dehydrogenase, NAD binding domain GQX67_04660 PF13520 Amino acid permease GQX67_04675 PF01842 ACT domain GQX67_04675 PF13840 ACT domain GQX67_04675 PF00696 Amino acid kinase family GQX67_04695 PF13361 UvrD-like helicase C-terminal domain GQX67_04695 PF00580 UvrD/REP helicase N-terminal domain GQX67_04705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GQX67_04710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GQX67_04715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX67_04715 PF00361 Proton-conducting membrane transporter GQX67_04720 PF00361 Proton-conducting membrane transporter GQX67_04725 PF00361 Proton-conducting membrane transporter GQX67_04730 PF03099 Biotin/lipoate A/B protein ligase family GQX67_04730 PF02237 Biotin protein ligase C terminal domain GQX67_04730 PF08279 HTH domain GQX67_04730 PF03099 Biotin/lipoate A/B protein ligase family GQX67_04730 PF02237 Biotin protein ligase C terminal domain GQX67_04730 PF08279 HTH domain GQX67_04735 PF03100 CcmE GQX67_04765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GQX67_04765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GQX67_04765 PF10531 SLBB domain GQX67_04770 PF05198 Translation initiation factor IF-3, N-terminal domain GQX67_04770 PF00707 Translation initiation factor IF-3, C-terminal domain GQX67_04775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX67_04775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQX67_04775 PF03129 Anticodon binding domain GQX67_04785 PF12838 4Fe-4S dicluster domain GQX67_04790 PF10396 GTP-binding protein TrmE N-terminus GQX67_04790 PF12631 MnmE helical domain GQX67_04790 PF01926 50S ribosome-binding GTPase GQX67_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_04805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GQX67_04805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GQX67_04810 PF02504 Fatty acid synthesis protein GQX67_04815 PF01783 Ribosomal L32p protein family GQX67_04820 PF02405 Permease MlaE GQX67_04825 PF00005 ABC transporter GQX67_04835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GQX67_04835 PF13288 DXP reductoisomerase C-terminal domain GQX67_04835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GQX67_04850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX67_04860 PF00266 Aminotransferase class-V GQX67_04870 PF01523 Putative modulator of DNA gyrase GQX67_04900 PF01367 5'-3' exonuclease, C-terminal SAM fold GQX67_04900 PF00476 DNA polymerase family A GQX67_04900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GQX67_04905 PF13333 Integrase core domain GQX67_04905 PF00665 Integrase core domain GQX67_04905 PF13276 HTH-like domain GQX67_04910 PF13276 HTH-like domain GQX67_04910 PF13333 Integrase core domain GQX67_04910 PF00665 Integrase core domain GQX67_04940 PF00557 Metallopeptidase family M24 GQX67_04940 PF01321 Creatinase/Prolidase N-terminal domain GQX67_04945 PF01134 Glucose inhibited division protein A GQX67_04945 PF13932 GidA associated domain GQX67_04955 PF03023 Lipid II flippase MurJ GQX67_04965 PF04860 Phage portal protein GQX67_04980 PF03099 Biotin/lipoate A/B protein ligase family GQX67_04985 PF02016 LD-carboxypeptidase N-terminal domain GQX67_04985 PF17676 LD-carboxypeptidase C-terminal domain GQX67_05000 PF00528 Binding-protein-dependent transport system inner membrane component GQX67_05010 PF01245 Ribosomal protein L19 GQX67_05015 PF01746 tRNA (Guanine-1)-methyltransferase GQX67_05020 PF01259 SAICAR synthetase GQX67_05025 PF00586 AIR synthase related protein, N-terminal domain GQX67_05025 PF02769 AIR synthase related protein, C-terminal domain GQX67_05040 PF03471 Transporter associated domain GQX67_05040 PF00571 CBS domain GQX67_05045 PF01208 Uroporphyrinogen decarboxylase (URO-D) GQX67_05050 PF00155 Aminotransferase class I and II GQX67_05075 PF00464 Serine hydroxymethyltransferase GQX67_05100 PF01545 Cation efflux family GQX67_05110 PF02660 Glycerol-3-phosphate acyltransferase GQX67_05115 PF01235 Sodium:alanine symporter family GQX67_05120 PF01235 Sodium:alanine symporter family GQX67_05125 PF01066 CDP-alcohol phosphatidyltransferase GQX67_05130 PF02666 Phosphatidylserine decarboxylase GQX67_05135 PF00154 recA bacterial DNA recombination protein GQX67_05140 PF00226 DnaJ domain GQX67_05140 PF01556 DnaJ C terminal domain GQX67_05140 PF00684 DnaJ central domain GQX67_05145 PF02875 Mur ligase family, glutamate ligase domain GQX67_05145 PF08245 Mur ligase middle domain GQX67_05160 PF03364 Polyketide cyclase / dehydrase and lipid transport GQX67_05165 PF13462 Thioredoxin GQX67_05195 PF12169 DNA polymerase III subunits gamma and tau domain III GQX67_05200 PF02575 YbaB/EbfC DNA-binding family GQX67_05205 PF13505 Outer membrane protein beta-barrel domain GQX67_05210 PF00140 Sigma-70 factor, region 1.2 GQX67_05210 PF04542 Sigma-70 region 2 GQX67_05210 PF04545 Sigma-70, region 4 GQX67_05220 PF00712 DNA polymerase III beta subunit, N-terminal domain GQX67_05220 PF02768 DNA polymerase III beta subunit, C-terminal domain GQX67_05220 PF02767 DNA polymerase III beta subunit, central domain GQX67_05225 PF01416 tRNA pseudouridine synthase GQX67_05240 PF00032 Cytochrome b(C-terminal)/b6/petD GQX67_05240 PF02167 Cytochrome C1 family GQX67_05240 PF00033 Cytochrome b/b6/petB GQX67_05245 PF00033 Cytochrome b/b6/petB GQX67_05245 PF00032 Cytochrome b(C-terminal)/b6/petD GQX67_05250 PF00226 DnaJ domain GQX67_05250 PF00684 DnaJ central domain GQX67_05250 PF01556 DnaJ C terminal domain GQX67_05260 PF00226 DnaJ domain GQX67_05260 PF00684 DnaJ central domain GQX67_05260 PF01556 DnaJ C terminal domain GQX67_05270 PF13393 Histidyl-tRNA synthetase GQX67_05270 PF03129 Anticodon binding domain GQX67_05275 PF01975 Survival protein SurE GQX67_05280 PF00448 SRP54-type protein, GTPase domain GQX67_05280 PF02978 Signal peptide binding domain GQX67_05280 PF02881 SRP54-type protein, helical bundle domain GQX67_05290 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_05295 PF07977 FabA-like domain GQX67_05305 PF07244 Surface antigen variable number repeat GQX67_05305 PF01103 Surface antigen GQX67_05310 PF02163 Peptidase family M50 GQX67_05310 PF17820 PDZ domain GQX67_05325 PF00216 Bacterial DNA-binding protein GQX67_05330 PF00575 S1 RNA binding domain GQX67_05335 PF02390 Putative methyltransferase GQX67_05345 PF01258 Prokaryotic dksA/traR C4-type zinc finger GQX67_05360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GQX67_05360 PF01926 50S ribosome-binding GTPase GQX67_05370 PF03232 Ubiquinone biosynthesis protein COQ7 GQX67_05380 PF00953 Glycosyl transferase family 4 GQX67_05385 PF01351 Ribonuclease HII GQX67_05405 PF00361 Proton-conducting membrane transporter GQX67_05410 PF01098 Cell cycle protein GQX67_05415 PF00156 Phosphoribosyl transferase domain GQX67_05415 PF13537 Glutamine amidotransferase domain GQX67_05420 PF02245 Methylpurine-DNA glycosylase (MPG) GQX67_05430 PF17864 RuvB AAA lid domain GQX67_05430 PF05496 Holliday junction DNA helicase RuvB P-loop domain GQX67_05430 PF05491 RuvB C-terminal winged helix domain GQX67_05435 PF07499 RuvA, C-terminal domain GQX67_05435 PF01330 RuvA N terminal domain GQX67_05450 PF00579 tRNA synthetases class I (W and Y) GQX67_05470 PF00293 NUDIX domain GQX67_05475 PF01026 TatD related DNase GQX67_05480 PF00056 lactate/malate dehydrogenase, NAD binding domain GQX67_05480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GQX67_05485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GQX67_05490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GQX67_05495 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GQX67_05500 PF01230 HIT domain GQX67_05515 PF02875 Mur ligase family, glutamate ligase domain GQX67_05515 PF01225 Mur ligase family, catalytic domain GQX67_05515 PF08245 Mur ligase middle domain GQX67_05520 PF01370 NAD dependent epimerase/dehydratase family GQX67_05520 PF08338 Domain of unknown function (DUF1731) GQX67_05535 PF13368 Topoisomerase C-terminal repeat GQX67_05535 PF01396 Topoisomerase DNA binding C4 zinc finger GQX67_05535 PF01751 Toprim domain GQX67_05535 PF01131 DNA topoisomerase GQX67_05540 PF17773 UPF0176 acylphosphatase like domain GQX67_05540 PF00581 Rhodanese-like domain GQX67_05545 PF00528 Binding-protein-dependent transport system inner membrane component GQX67_05555 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX67_05570 PF04379 ApaG domain GQX67_05575 PF02222 ATP-grasp domain GQX67_05575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GQX67_05580 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GQX67_05580 PF02542 YgbB family GQX67_05585 PF01594 AI-2E family transporter GQX67_05595 PF02899 Phage integrase, N-terminal SAM-like domain GQX67_05595 PF00589 Phage integrase family GQX67_05605 PF01649 Ribosomal protein S20 GQX67_05610 PF00285 Citrate synthase, C-terminal domain GQX67_05630 PF01039 Carboxyl transferase domain GQX67_05640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GQX67_05640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GQX67_05640 PF06827 Zinc finger found in FPG and IleRS GQX67_05645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GQX67_05645 PF01243 Pyridoxamine 5'-phosphate oxidase GQX67_05655 PF00753 Metallo-beta-lactamase superfamily GQX67_05655 PF03772 Competence protein GQX67_05665 PF00849 RNA pseudouridylate synthase GQX67_05665 PF01479 S4 domain GQX67_05670 PF01219 Prokaryotic diacylglycerol kinase GQX67_05680 PF00162 Phosphoglycerate kinase GQX67_05690 PF03060 Nitronate monooxygenase GQX67_05705 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GQX67_05725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQX67_05725 PF02817 e3 binding domain GQX67_05725 PF00364 Biotin-requiring enzyme GQX67_05740 PF13662 Toprim domain GQX67_05740 PF02132 RecR protein GQX67_05750 PF00334 Nucleoside diphosphate kinase GQX67_05760 PF00762 Ferrochelatase GQX67_05775 PF00227 Proteasome subunit GQX67_05780 PF10431 C-terminal, D2-small domain, of ClpB protein GQX67_05780 PF07724 AAA domain (Cdc48 subfamily) GQX67_05780 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_05790 PF00348 Polyprenyl synthetase GQX67_05795 PF00550 Phosphopantetheine attachment site GQX67_05800 PF00109 Beta-ketoacyl synthase, N-terminal domain GQX67_05800 PF02801 Beta-ketoacyl synthase, C-terminal domain GQX67_05810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GQX67_05815 PF02511 Thymidylate synthase complementing protein GQX67_05825 PF18074 Primosomal protein N C-terminal domain GQX67_05825 PF00271 Helicase conserved C-terminal domain GQX67_05825 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GQX67_05825 PF17764 3′ DNA-binding domain (3′BD) GQX67_05825 PF00270 DEAD/DEAH box helicase GQX67_05830 PF00355 Rieske [2Fe-2S] domain GQX67_05830 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GQX67_05835 PF03989 DNA gyrase C-terminal domain, beta-propeller GQX67_05835 PF00521 DNA gyrase/topoisomerase IV, subunit A GQX67_05865 PF02632 BioY family GQX67_05870 PF00881 Nitroreductase family GQX67_05875 PF01678 Diaminopimelate epimerase GQX67_05880 PF02629 CoA binding domain GQX67_05880 PF00549 CoA-ligase GQX67_05885 PF08442 ATP-grasp domain GQX67_05885 PF00549 CoA-ligase GQX67_05900 PF04452 RNA methyltransferase GQX67_05915 PF01218 Coproporphyrinogen III oxidase GQX67_05920 PF00072 Response regulator receiver domain GQX67_05920 PF13188 PAS domain GQX67_05920 PF00512 His Kinase A (phospho-acceptor) domain GQX67_05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX67_05920 PF08448 PAS fold GQX67_05925 PF13614 AAA domain GQX67_05930 PF17762 HTH domain found in ParB protein GQX67_05930 PF02195 ParB-like nuclease domain GQX67_05950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQX67_05955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQX67_05985 PF02687 FtsX-like permease family GQX67_05985 PF12704 MacB-like periplasmic core domain GQX67_06000 PF00231 ATP synthase GQX67_06005 PF01523 Putative modulator of DNA gyrase GQX67_06010 PF00313 'Cold-shock' DNA-binding domain GQX67_06015 PF00271 Helicase conserved C-terminal domain GQX67_06015 PF00270 DEAD/DEAH box helicase GQX67_06020 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_06020 PF07724 AAA domain (Cdc48 subfamily) GQX67_06020 PF17871 AAA lid domain GQX67_06020 PF02861 Clp amino terminal domain, pathogenicity island component GQX67_06020 PF10431 C-terminal, D2-small domain, of ClpB protein GQX67_06025 PF01791 DeoC/LacD family aldolase GQX67_06035 PF01180 Dihydroorotate dehydrogenase GQX67_06040 PF14622 Ribonuclease-III-like GQX67_06040 PF00035 Double-stranded RNA binding motif GQX67_06050 PF13091 PLD-like domain GQX67_06075 PF00210 Ferritin-like domain GQX67_06085 PF00999 Sodium/hydrogen exchanger family GQX67_06085 PF02254 TrkA-N domain GQX67_06095 PF02223 Thymidylate kinase GQX67_06105 PF06480 FtsH Extracellular GQX67_06105 PF17862 AAA+ lid domain GQX67_06105 PF00004 ATPase family associated with various cellular activities (AAA) GQX67_06105 PF01434 Peptidase family M41 GQX67_06110 PF01171 PP-loop family GQX67_06115 PF00691 OmpA family GQX67_06140 PF00719 Inorganic pyrophosphatase GQX67_06155 PF09312 SurA N-terminal domain GQX67_06155 PF00639 PPIC-type PPIASE domain GQX67_06160 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX67_06185 PF03717 Penicillin-binding Protein dimerisation domain GQX67_06185 PF00905 Penicillin binding protein transpeptidase domain GQX67_06190 PF02401 LytB protein GQX67_06200 PF00183 Hsp90 protein GQX67_06210 PF00155 Aminotransferase class I and II GQX67_06220 PF01132 Elongation factor P (EF-P) OB domain GQX67_06220 PF09285 Elongation factor P, C-terminal GQX67_06220 PF08207 Elongation factor P (EF-P) KOW-like domain GQX67_06225 PF01782 RimM N-terminal domain GQX67_06225 PF05239 PRC-barrel domain GQX67_06230 PF00202 Aminotransferase class-III GQX67_06235 PF00989 PAS fold GQX67_06235 PF00512 His Kinase A (phospho-acceptor) domain GQX67_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX67_06240 PF00578 AhpC/TSA family GQX67_06245 PF02463 RecF/RecN/SMC N terminal domain GQX67_06265 PF03631 Virulence factor BrkB GQX67_06275 PF02142 MGS-like domain GQX67_06275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GQX67_06275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQX67_06290 PF04546 Sigma-70, non-essential region GQX67_06290 PF03979 Sigma-70 factor, region 1.1 GQX67_06290 PF04545 Sigma-70, region 4 GQX67_06290 PF04539 Sigma-70 region 3 GQX67_06290 PF04542 Sigma-70 region 2 GQX67_06290 PF00140 Sigma-70 factor, region 1.2 GQX67_06295 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GQX67_06305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX67_06305 PF00361 Proton-conducting membrane transporter GQX67_06305 PF13244 Domain of unknown function (DUF4040) GQX67_06310 PF03334 Na+/H+ antiporter subunit GQX67_06320 PF01192 RNA polymerase Rpb6 GQX67_06330 PF00731 AIR carboxylase GQX67_06335 PF01119 DNA mismatch repair protein, C-terminal domain GQX67_06335 PF08676 MutL C terminal dimerisation domain GQX67_06340 PF02779 Transketolase, pyrimidine binding domain GQX67_06340 PF16870 2-oxoglutarate dehydrogenase C-terminal GQX67_06340 PF16078 2-oxoglutarate dehydrogenase N-terminus GQX67_06340 PF00676 Dehydrogenase E1 component GQX67_06360 PF13784 Fic/DOC family N-terminal GQX67_06360 PF02661 Fic/DOC family GQX67_06365 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GQX67_06370 PF01040 UbiA prenyltransferase family GQX67_06375 PF02033 Ribosome-binding factor A GQX67_06380 PF04760 Translation initiation factor IF-2, N-terminal region GQX67_06380 PF11987 Translation-initiation factor 2 GQX67_06380 PF00009 Elongation factor Tu GTP binding domain GQX67_06385 PF13184 NusA-like KH domain GQX67_06385 PF08529 NusA N-terminal domain GQX67_06385 PF00575 S1 RNA binding domain GQX67_06390 PF00873 AcrB/AcrD/AcrF family GQX67_06400 PF00120 Glutamine synthetase, catalytic domain