locus-tag class description GQX68_00005 PF08299 Bacterial dnaA protein helix-turn-helix GQX68_00005 PF00308 Bacterial dnaA protein GQX68_00005 PF11638 DnaA N-terminal domain GQX68_00020 PF00925 GTP cyclohydrolase II GQX68_00025 PF04335 VirB8 protein GQX68_00040 PF00437 Type II/IV secretion system protein GQX68_00045 PF02534 Type IV secretory system Conjugative DNA transfer GQX68_00055 PF13847 Methyltransferase domain GQX68_00055 PF17827 PrmC N-terminal domain GQX68_00065 PF00164 Ribosomal protein S12/S23 GQX68_00070 PF00177 Ribosomal protein S7p/S5e GQX68_00075 PF00679 Elongation factor G C-terminus GQX68_00075 PF00009 Elongation factor Tu GTP binding domain GQX68_00075 PF03144 Elongation factor Tu domain 2 GQX68_00075 PF03764 Elongation factor G, domain IV GQX68_00075 PF14492 Elongation Factor G, domain II GQX68_00080 PF00009 Elongation factor Tu GTP binding domain GQX68_00080 PF03144 Elongation factor Tu domain 2 GQX68_00080 PF03143 Elongation factor Tu C-terminal domain GQX68_00095 PF00467 KOW motif GQX68_00095 PF02357 Transcription termination factor nusG GQX68_00100 PF00298 Ribosomal protein L11, RNA binding domain GQX68_00100 PF03946 Ribosomal protein L11, N-terminal domain GQX68_00105 PF00687 Ribosomal protein L1p/L10e family GQX68_00110 PF00466 Ribosomal protein L10 GQX68_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain GQX68_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain GQX68_00120 PF05000 RNA polymerase Rpb1, domain 4 GQX68_00120 PF04997 RNA polymerase Rpb1, domain 1 GQX68_00120 PF00623 RNA polymerase Rpb1, domain 2 GQX68_00120 PF04983 RNA polymerase Rpb1, domain 3 GQX68_00120 PF10385 RNA polymerase beta subunit external 1 domain GQX68_00120 PF04563 RNA polymerase beta subunit GQX68_00120 PF04561 RNA polymerase Rpb2, domain 2 GQX68_00120 PF04565 RNA polymerase Rpb2, domain 3 GQX68_00120 PF00562 RNA polymerase Rpb2, domain 6 GQX68_00120 PF04560 RNA polymerase Rpb2, domain 7 GQX68_00120 PF04998 RNA polymerase Rpb1, domain 5 GQX68_00125 PF01207 Dihydrouridine synthase (Dus) GQX68_00135 PF02403 Seryl-tRNA synthetase N-terminal domain GQX68_00135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX68_00140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GQX68_00140 PF02843 Phosphoribosylglycinamide synthetase, C domain GQX68_00140 PF02844 Phosphoribosylglycinamide synthetase, N domain GQX68_00160 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GQX68_00160 PF14572 Phosphoribosyl synthetase-associated domain GQX68_00165 PF02686 Glu-tRNAGln amidotransferase C subunit GQX68_00170 PF04052 TolB amino-terminal domain GQX68_00170 PF07676 WD40-like Beta Propeller Repeat GQX68_00175 PF17770 Ribonuclease J C-terminal domain GQX68_00175 PF12706 Beta-lactamase superfamily domain GQX68_00175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GQX68_00180 PF00226 DnaJ domain GQX68_00180 PF01556 DnaJ C terminal domain GQX68_00180 PF00684 DnaJ central domain GQX68_00240 PF02789 Cytosol aminopeptidase family, N-terminal domain GQX68_00240 PF00883 Cytosol aminopeptidase family, catalytic domain GQX68_00250 PF00216 Bacterial DNA-binding protein GQX68_00260 PF01551 Peptidase family M23 GQX68_00265 PF13603 Leucyl-tRNA synthetase, Domain 2 GQX68_00265 PF08264 Anticodon-binding domain of tRNA GQX68_00265 PF09334 tRNA synthetases class I (M) GQX68_00265 PF00133 tRNA synthetases class I (I, L, M and V) GQX68_00275 PF13333 Integrase core domain GQX68_00275 PF00665 Integrase core domain GQX68_00275 PF13276 HTH-like domain GQX68_00280 PF00665 Integrase core domain GQX68_00280 PF13276 HTH-like domain GQX68_00280 PF13333 Integrase core domain GQX68_00295 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GQX68_00305 PF00380 Ribosomal protein S9/S16 GQX68_00310 PF00572 Ribosomal protein L13 GQX68_00320 PF10691 Protein of unknown function (DUF2497) GQX68_00325 PF01728 FtsJ-like methyltransferase GQX68_00360 PF13333 Integrase core domain GQX68_00360 PF00665 Integrase core domain GQX68_00360 PF13276 HTH-like domain GQX68_00365 PF00665 Integrase core domain GQX68_00365 PF13276 HTH-like domain GQX68_00365 PF13333 Integrase core domain GQX68_00395 PF02355 Protein export membrane protein GQX68_00400 PF13333 Integrase core domain GQX68_00400 PF00665 Integrase core domain GQX68_00400 PF13276 HTH-like domain GQX68_00415 PF00571 CBS domain GQX68_00415 PF00478 IMP dehydrogenase / GMP reductase domain GQX68_00420 PF00398 Ribosomal RNA adenine dimethylase GQX68_00430 PF00121 Triosephosphate isomerase GQX68_00435 PF17782 DprA winged helix domain GQX68_00435 PF02481 DNA recombination-mediator protein A GQX68_00440 PF11953 Domain of unknown function (DUF3470) GQX68_00440 PF00037 4Fe-4S binding domain GQX68_00450 PF01820 D-ala D-ala ligase N-terminus GQX68_00450 PF07478 D-ala D-ala ligase C-terminus GQX68_00455 PF08478 POTRA domain, FtsQ-type GQX68_00455 PF03799 Cell division protein FtsQ GQX68_00460 PF00768 D-alanyl-D-alanine carboxypeptidase GQX68_00460 PF07943 Penicillin-binding protein 5, C-terminal domain GQX68_00465 PF00893 Small Multidrug Resistance protein GQX68_00470 PF00893 Small Multidrug Resistance protein GQX68_00480 PF14850 DNA-binding domain of Proline dehydrogenase GQX68_00480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GQX68_00480 PF01619 Proline dehydrogenase GQX68_00480 PF00171 Aldehyde dehydrogenase family GQX68_00485 PF00694 Aconitase C-terminal domain GQX68_00485 PF00330 Aconitase family (aconitate hydratase) GQX68_00490 PF02556 Preprotein translocase subunit SecB GQX68_00500 PF00929 Exonuclease GQX68_00505 PF02630 SCO1/SenC GQX68_00515 PF00204 DNA gyrase B GQX68_00515 PF00986 DNA gyrase B subunit, carboxyl terminus GQX68_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX68_00515 PF01751 Toprim domain GQX68_00535 PF13276 HTH-like domain GQX68_00535 PF00665 Integrase core domain GQX68_00535 PF13333 Integrase core domain GQX68_00550 PF04551 GcpE protein GQX68_00565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GQX68_00565 PF09397 Ftsk gamma domain GQX68_00565 PF01580 FtsK/SpoIIIE family GQX68_00565 PF17854 FtsK alpha domain GQX68_00570 PF02325 YGGT family GQX68_00620 PF00677 Lumazine binding domain GQX68_00630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GQX68_00630 PF01409 tRNA synthetases class II core domain (F) GQX68_00635 PF12804 MobA-like NTP transferase domain GQX68_00635 PF14602 Hexapeptide repeat of succinyl-transferase GQX68_00635 PF00132 Bacterial transferase hexapeptide (six repeats) GQX68_00640 PF00829 Ribosomal prokaryotic L21 protein GQX68_00645 PF01016 Ribosomal L27 protein GQX68_00655 PF02773 S-adenosylmethionine synthetase, C-terminal domain GQX68_00655 PF00438 S-adenosylmethionine synthetase, N-terminal domain GQX68_00655 PF02772 S-adenosylmethionine synthetase, central domain GQX68_00665 PF03070 TENA/THI-4/PQQC family GQX68_00675 PF00510 Cytochrome c oxidase subunit III GQX68_00680 PF02075 Crossover junction endodeoxyribonuclease RuvC GQX68_00685 PF03652 Holliday junction resolvase GQX68_00695 PF02637 GatB domain GQX68_00695 PF02934 GatB/GatE catalytic domain GQX68_00710 PF09190 DALR domain GQX68_00710 PF01406 tRNA synthetases class I (C) catalytic domain GQX68_00715 PF06055 Exopolysaccharide synthesis, ExoD GQX68_00725 PF02416 mttA/Hcf106 family GQX68_00730 PF00005 ABC transporter GQX68_00730 PF08402 TOBE domain GQX68_00740 PF01541 GIY-YIG catalytic domain GQX68_00740 PF08459 UvrC Helix-hairpin-helix N-terminal GQX68_00740 PF02151 UvrB/uvrC motif GQX68_00745 PF02092 Glycyl-tRNA synthetase beta subunit GQX68_00745 PF05746 DALR anticodon binding domain GQX68_00750 PF02091 Glycyl-tRNA synthetase alpha subunit GQX68_00760 PF00490 Delta-aminolevulinic acid dehydratase GQX68_00765 PF00146 NADH dehydrogenase GQX68_00770 PF00384 Molybdopterin oxidoreductase GQX68_00770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GQX68_00770 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GQX68_00785 PF03167 Uracil DNA glycosylase superfamily GQX68_00790 PF01327 Polypeptide deformylase GQX68_00795 PF02491 SHS2 domain inserted in FTSA GQX68_00800 PF00557 Metallopeptidase family M24 GQX68_00805 PF00083 Sugar (and other) transporter GQX68_00805 PF07690 Major Facilitator Superfamily GQX68_00810 PF01795 MraW methylase family GQX68_00825 PF14693 Ribosomal protein TL5, C-terminal domain GQX68_00825 PF01386 Ribosomal L25p family GQX68_00830 PF01195 Peptidyl-tRNA hydrolase GQX68_00840 PF01494 FAD binding domain GQX68_00850 PF10609 NUBPL iron-transfer P-loop NTPase GQX68_00875 PF00665 Integrase core domain GQX68_00875 PF13333 Integrase core domain GQX68_00875 PF13276 HTH-like domain GQX68_00880 PF00665 Integrase core domain GQX68_00880 PF13276 HTH-like domain GQX68_00880 PF13333 Integrase core domain GQX68_00895 PF01121 Dephospho-CoA kinase GQX68_00900 PF01612 3'-5' exonuclease GQX68_00900 PF00570 HRDC domain GQX68_00905 PF01624 MutS domain I GQX68_00905 PF05188 MutS domain II GQX68_00905 PF00488 MutS domain V GQX68_00905 PF05192 MutS domain III GQX68_00905 PF05190 MutS family domain IV GQX68_00920 PF00571 CBS domain GQX68_00920 PF03471 Transporter associated domain GQX68_00920 PF03741 Integral membrane protein TerC family GQX68_00925 PF00117 Glutamine amidotransferase class-I GQX68_00925 PF00958 GMP synthase C terminal domain GQX68_00925 PF02540 NAD synthase GQX68_00930 PF03477 ATP cone domain GQX68_00930 PF00317 Ribonucleotide reductase, all-alpha domain GQX68_00930 PF02867 Ribonucleotide reductase, barrel domain GQX68_00935 PF01209 ubiE/COQ5 methyltransferase family GQX68_00960 PF00468 Ribosomal protein L34 GQX68_00965 PF00528 Binding-protein-dependent transport system inner membrane component GQX68_00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX68_00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQX68_00975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GQX68_00985 PF13333 Integrase core domain GQX68_00985 PF13276 HTH-like domain GQX68_00985 PF00665 Integrase core domain GQX68_01000 PF00596 Class II Aldolase and Adducin N-terminal domain GQX68_01010 PF00814 Glycoprotease family GQX68_01020 PF00268 Ribonucleotide reductase, small chain GQX68_01040 PF17761 DUF1016 N-terminal domain GQX68_01040 PF06250 YhcG PDDEXK nuclease domain GQX68_01045 PF11967 Recombination protein O N terminal GQX68_01045 PF02565 Recombination protein O C terminal GQX68_01055 PF00990 Diguanylate cyclase, GGDEF domain GQX68_01055 PF00072 Response regulator receiver domain GQX68_01065 PF05088 Bacterial NAD-glutamate dehydrogenase GQX68_01070 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_01070 PF07724 AAA domain (Cdc48 subfamily) GQX68_01070 PF17871 AAA lid domain GQX68_01070 PF10431 C-terminal, D2-small domain, of ClpB protein GQX68_01070 PF02861 Clp amino terminal domain, pathogenicity island component GQX68_01085 PF00679 Elongation factor G C-terminus GQX68_01085 PF00009 Elongation factor Tu GTP binding domain GQX68_01085 PF03144 Elongation factor Tu domain 2 GQX68_01090 PF00156 Phosphoribosyl transferase domain GQX68_01095 PF00375 Sodium:dicarboxylate symporter family GQX68_01100 PF01979 Amidohydrolase family GQX68_01110 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GQX68_01110 PF01578 Cytochrome C assembly protein GQX68_01125 PF07549 SecD/SecF GG Motif GQX68_01125 PF02355 Protein export membrane protein GQX68_01135 PF14849 YidC periplasmic domain GQX68_01135 PF02096 60Kd inner membrane protein GQX68_01140 PF00885 6,7-dimethyl-8-ribityllumazine synthase GQX68_01145 PF01029 NusB family GQX68_01165 PF00692 dUTPase GQX68_01170 PF08264 Anticodon-binding domain of tRNA GQX68_01170 PF00133 tRNA synthetases class I (I, L, M and V) GQX68_01175 PF00696 Amino acid kinase family GQX68_01180 PF01926 50S ribosome-binding GTPase GQX68_01185 PF00472 RF-1 domain GQX68_01185 PF03462 PCRF domain GQX68_01190 PF07690 Major Facilitator Superfamily GQX68_01215 PF13333 Integrase core domain GQX68_01215 PF13276 HTH-like domain GQX68_01215 PF00665 Integrase core domain GQX68_01220 PF02646 RmuC family GQX68_01225 PF01609 Transposase DDE domain GQX68_01230 PF00872 Transposase, Mutator family GQX68_01240 PF01381 Helix-turn-helix GQX68_01240 PF08671 Anti-repressor SinI GQX68_01275 PF18755 Restriction Enzyme Adenine Methylase Associated GQX68_01275 PF01555 DNA methylase GQX68_01320 PF01548 Transposase GQX68_01320 PF02371 Transposase IS116/IS110/IS902 family GQX68_01400 PF00239 Resolvase, N terminal domain GQX68_01400 PF02796 Helix-turn-helix domain of resolvase GQX68_01445 PF01527 Transposase GQX68_01455 PF00665 Integrase core domain GQX68_01455 PF13276 HTH-like domain GQX68_01455 PF13333 Integrase core domain GQX68_01460 PF13333 Integrase core domain GQX68_01460 PF00665 Integrase core domain GQX68_01460 PF13276 HTH-like domain GQX68_01465 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GQX68_01465 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GQX68_01470 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQX68_01475 PF01040 UbiA prenyltransferase family GQX68_01480 PF00075 RNase H GQX68_01490 PF00118 TCP-1/cpn60 chaperonin family GQX68_01495 PF00166 Chaperonin 10 Kd subunit GQX68_01500 PF01571 Aminomethyltransferase folate-binding domain GQX68_01505 PF01368 DHH family GQX68_01505 PF02272 DHHA1 domain GQX68_01505 PF17768 RecJ OB domain GQX68_01520 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQX68_01530 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_01530 PF05362 Lon protease (S16) C-terminal proteolytic domain GQX68_01530 PF02190 ATP-dependent protease La (LON) substrate-binding domain GQX68_01535 PF06689 ClpX C4-type zinc finger GQX68_01535 PF10431 C-terminal, D2-small domain, of ClpB protein GQX68_01535 PF07724 AAA domain (Cdc48 subfamily) GQX68_01540 PF00574 Clp protease GQX68_01545 PF05698 Bacterial trigger factor protein (TF) C-terminus GQX68_01545 PF05697 Bacterial trigger factor protein (TF) GQX68_01545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQX68_01555 PF04972 BON domain GQX68_01560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GQX68_01560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GQX68_01565 PF03033 Glycosyltransferase family 28 N-terminal domain GQX68_01565 PF04101 Glycosyltransferase family 28 C-terminal domain GQX68_01575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQX68_01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_01580 PF02371 Transposase IS116/IS110/IS902 family GQX68_01580 PF01548 Transposase GQX68_01605 PF01235 Sodium:alanine symporter family GQX68_01620 PF02545 Maf-like protein GQX68_01625 PF01176 Translation initiation factor 1A / IF-1 GQX68_01640 PF00709 Adenylosuccinate synthetase GQX68_01655 PF01578 Cytochrome C assembly protein GQX68_01660 PF03618 Kinase/pyrophosphorylase GQX68_01665 PF00444 Ribosomal protein L36 GQX68_01685 PF00665 Integrase core domain GQX68_01685 PF13276 HTH-like domain GQX68_01685 PF13333 Integrase core domain GQX68_01690 PF13333 Integrase core domain GQX68_01690 PF00665 Integrase core domain GQX68_01690 PF13276 HTH-like domain GQX68_01695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQX68_01700 PF13784 Fic/DOC family N-terminal GQX68_01700 PF02661 Fic/DOC family GQX68_01705 PF01807 CHC2 zinc finger GQX68_01705 PF08275 DNA primase catalytic core, N-terminal domain GQX68_01705 PF13662 Toprim domain GQX68_01715 PF08241 Methyltransferase domain GQX68_01725 PF09334 tRNA synthetases class I (M) GQX68_01725 PF08264 Anticodon-binding domain of tRNA GQX68_01735 PF00772 DnaB-like helicase N terminal domain GQX68_01735 PF03796 DnaB-like helicase C terminal domain GQX68_01745 PF06271 RDD family GQX68_01750 PF04002 RadC-like JAB domain GQX68_01760 PF00580 UvrD/REP helicase N-terminal domain GQX68_01760 PF12705 PD-(D/E)XK nuclease superfamily GQX68_01760 PF13361 UvrD-like helicase C-terminal domain GQX68_01765 PF08544 GHMP kinases C terminal GQX68_01765 PF00288 GHMP kinases N terminal domain GQX68_01775 PF00950 ABC 3 transport family GQX68_01795 PF01113 Dihydrodipicolinate reductase, N-terminus GQX68_01795 PF05173 Dihydrodipicolinate reductase, C-terminus GQX68_01800 PF00005 ABC transporter GQX68_01815 PF00665 Integrase core domain GQX68_01815 PF13276 HTH-like domain GQX68_01815 PF13333 Integrase core domain GQX68_01820 PF13333 Integrase core domain GQX68_01820 PF00665 Integrase core domain GQX68_01820 PF13276 HTH-like domain GQX68_01830 PF00571 CBS domain GQX68_01830 PF01769 Divalent cation transporter GQX68_01830 PF03448 MgtE intracellular N domain GQX68_01850 PF00692 dUTPase GQX68_01875 PF07690 Major Facilitator Superfamily GQX68_01890 PF02780 Transketolase, C-terminal domain GQX68_01890 PF00456 Transketolase, thiamine diphosphate binding domain GQX68_01890 PF02779 Transketolase, pyrimidine binding domain GQX68_01895 PF00163 Ribosomal protein S4/S9 N-terminal domain GQX68_01895 PF01479 S4 domain GQX68_01905 PF04384 Iron-sulphur cluster assembly GQX68_01915 PF00830 Ribosomal L28 family GQX68_01920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GQX68_01920 PF04055 Radical SAM superfamily GQX68_01925 PF01209 ubiE/COQ5 methyltransferase family GQX68_01930 PF01098 Cell cycle protein GQX68_01960 PF01380 SIS domain GQX68_01965 PF02699 Preprotein translocase subunit GQX68_01975 PF00318 Ribosomal protein S2 GQX68_01980 PF00889 Elongation factor TS GQX68_01985 PF00696 Amino acid kinase family GQX68_01990 PF01765 Ribosome recycling factor GQX68_02000 PF01255 Putative undecaprenyl diphosphate synthase GQX68_02015 PF01467 Cytidylyltransferase-like GQX68_02035 PF13333 Integrase core domain GQX68_02035 PF00665 Integrase core domain GQX68_02035 PF13276 HTH-like domain GQX68_02040 PF13333 Integrase core domain GQX68_02040 PF00665 Integrase core domain GQX68_02040 PF13276 HTH-like domain GQX68_02050 PF01527 Transposase GQX68_02090 PF08676 MutL C terminal dimerisation domain GQX68_02090 PF01119 DNA mismatch repair protein, C-terminal domain GQX68_02110 PF01425 Amidase GQX68_02115 PF00919 Uncharacterized protein family UPF0004 GQX68_02115 PF04055 Radical SAM superfamily GQX68_02135 PF03330 Lytic transglycolase GQX68_02140 PF01225 Mur ligase family, catalytic domain GQX68_02140 PF02875 Mur ligase family, glutamate ligase domain GQX68_02140 PF08245 Mur ligase middle domain GQX68_02145 PF00113 Enolase, C-terminal TIM barrel domain GQX68_02145 PF03952 Enolase, N-terminal domain GQX68_02150 PF01926 50S ribosome-binding GTPase GQX68_02150 PF01018 GTP1/OBG GQX68_02155 PF00206 Lyase GQX68_02155 PF10415 Fumarase C C-terminus GQX68_02160 PF00462 Glutaredoxin GQX68_02175 PF00390 Malic enzyme, N-terminal domain GQX68_02175 PF03949 Malic enzyme, NAD binding domain GQX68_02175 PF01515 Phosphate acetyl/butaryl transferase GQX68_02180 PF01066 CDP-alcohol phosphatidyltransferase GQX68_02190 PF13525 Outer membrane lipoprotein GQX68_02195 PF01709 Transcriptional regulator GQX68_02200 PF01551 Peptidase family M23 GQX68_02200 PF08525 Opacity-associated protein A N-terminal motif GQX68_02200 PF01476 LysM domain GQX68_02225 PF00679 Elongation factor G C-terminus GQX68_02225 PF03144 Elongation factor Tu domain 2 GQX68_02225 PF06421 GTP-binding protein LepA C-terminus GQX68_02225 PF00009 Elongation factor Tu GTP binding domain GQX68_02225 PF14492 Elongation Factor G, domain II GQX68_02235 PF00364 Biotin-requiring enzyme GQX68_02235 PF02780 Transketolase, C-terminal domain GQX68_02235 PF02779 Transketolase, pyrimidine binding domain GQX68_02240 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_02240 PF17862 AAA+ lid domain GQX68_02240 PF06480 FtsH Extracellular GQX68_02240 PF01434 Peptidase family M41 GQX68_02250 PF07690 Major Facilitator Superfamily GQX68_02250 PF00083 Sugar (and other) transporter GQX68_02255 PF14437 MafB19-like deaminase GQX68_02260 PF00117 Glutamine amidotransferase class-I GQX68_02260 PF06418 CTP synthase N-terminus GQX68_02280 PF08264 Anticodon-binding domain of tRNA GQX68_02280 PF00133 tRNA synthetases class I (I, L, M and V) GQX68_02285 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_02285 PF06480 FtsH Extracellular GQX68_02285 PF17862 AAA+ lid domain GQX68_02285 PF01434 Peptidase family M41 GQX68_02295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GQX68_02320 PF00005 ABC transporter GQX68_02325 PF00528 Binding-protein-dependent transport system inner membrane component GQX68_02330 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQX68_02335 PF02863 Arginine repressor, C-terminal domain GQX68_02335 PF01316 Arginine repressor, DNA binding domain GQX68_02340 PF00902 Sec-independent protein translocase protein (TatC) GQX68_02345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQX68_02345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQX68_02375 PF01743 Poly A polymerase head domain GQX68_02375 PF12627 Probable RNA and SrmB- binding site of polymerase A GQX68_02375 PF13735 tRNA nucleotidyltransferase domain 2 putative GQX68_02385 PF06071 Protein of unknown function (DUF933) GQX68_02385 PF01926 50S ribosome-binding GTPase GQX68_02405 PF00625 Guanylate kinase GQX68_02415 PF02910 Fumarate reductase flavoprotein C-term GQX68_02415 PF00890 FAD binding domain GQX68_02420 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQX68_02430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQX68_02430 PF00289 Biotin carboxylase, N-terminal domain GQX68_02430 PF00364 Biotin-requiring enzyme GQX68_02430 PF18140 Propionyl-coenzyme A carboxylase BT domain GQX68_02430 PF02785 Biotin carboxylase C-terminal domain GQX68_02435 PF02628 Cytochrome oxidase assembly protein GQX68_02455 PF00137 ATP synthase subunit C GQX68_02460 PF00119 ATP synthase A chain GQX68_02470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GQX68_02470 PF01588 Putative tRNA binding domain GQX68_02470 PF03147 Ferredoxin-fold anticodon binding domain GQX68_02470 PF03484 tRNA synthetase B5 domain GQX68_02470 PF03483 B3/4 domain GQX68_02480 PF00133 tRNA synthetases class I (I, L, M and V) GQX68_02480 PF08264 Anticodon-binding domain of tRNA GQX68_02490 PF00919 Uncharacterized protein family UPF0004 GQX68_02490 PF01938 TRAM domain GQX68_02490 PF04055 Radical SAM superfamily GQX68_02500 PF03653 Uncharacterised protein family (UPF0093) GQX68_02505 PF00676 Dehydrogenase E1 component GQX68_02510 PF01479 S4 domain GQX68_02510 PF00849 RNA pseudouridylate synthase GQX68_02515 PF00083 Sugar (and other) transporter GQX68_02515 PF08946 Osmosensory transporter coiled coil GQX68_02520 PF01336 OB-fold nucleic acid binding domain GQX68_02520 PF00152 tRNA synthetases class II (D, K and N) GQX68_02520 PF02938 GAD domain GQX68_02530 PF00005 ABC transporter GQX68_02555 PF03485 Arginyl tRNA synthetase N terminal domain GQX68_02555 PF00750 tRNA synthetases class I (R) GQX68_02555 PF05746 DALR anticodon binding domain GQX68_02565 PF00664 ABC transporter transmembrane region GQX68_02565 PF00005 ABC transporter GQX68_02580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX68_02595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GQX68_02595 PF01565 FAD binding domain GQX68_02600 PF03900 Porphobilinogen deaminase, C-terminal domain GQX68_02600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GQX68_02605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQX68_02605 PF00364 Biotin-requiring enzyme GQX68_02605 PF02817 e3 binding domain GQX68_02630 PF07516 SecA Wing and Scaffold domain GQX68_02630 PF07517 SecA DEAD-like domain GQX68_02630 PF01043 SecA preprotein cross-linking domain GQX68_02630 PF02810 SEC-C motif GQX68_02640 PF00923 Transaldolase/Fructose-6-phosphate aldolase GQX68_02660 PF00665 Integrase core domain GQX68_02660 PF13333 Integrase core domain GQX68_02660 PF13276 HTH-like domain GQX68_02670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GQX68_02670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GQX68_02675 PF02441 Flavoprotein GQX68_02680 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) GQX68_02685 PF00571 CBS domain GQX68_02685 PF01595 Cyclin M transmembrane N-terminal domain GQX68_02685 PF03471 Transporter associated domain GQX68_02690 PF00202 Aminotransferase class-III GQX68_02695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GQX68_02715 PF01609 Transposase DDE domain GQX68_02725 PF01734 Patatin-like phospholipase GQX68_02860 PF18755 Restriction Enzyme Adenine Methylase Associated GQX68_02860 PF01555 DNA methylase GQX68_02870 PF00023 Ankyrin repeat GQX68_02935 PF00271 Helicase conserved C-terminal domain GQX68_02935 PF12419 SNF2 Helicase protein GQX68_02935 PF00176 SNF2 family N-terminal domain GQX68_02940 PF00132 Bacterial transferase hexapeptide (six repeats) GQX68_02940 PF14602 Hexapeptide repeat of succinyl-transferase GQX68_02940 PF12804 MobA-like NTP transferase domain GQX68_02945 PF16363 GDP-mannose 4,6 dehydratase GQX68_02965 PF00005 ABC transporter GQX68_02965 PF00664 ABC transporter transmembrane region GQX68_02970 PF01212 Beta-eliminating lyase GQX68_02975 PF01212 Beta-eliminating lyase GQX68_02985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GQX68_02985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GQX68_02985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GQX68_02990 PF00892 EamA-like transporter family GQX68_03010 PF04002 RadC-like JAB domain GQX68_03015 PF01381 Helix-turn-helix GQX68_03050 PF00239 Resolvase, N terminal domain GQX68_03050 PF02796 Helix-turn-helix domain of resolvase GQX68_03120 PF13276 HTH-like domain GQX68_03120 PF00665 Integrase core domain GQX68_03120 PF13333 Integrase core domain GQX68_03130 PF01527 Transposase GQX68_03135 PF00529 HlyD membrane-fusion protein of T1SS GQX68_03135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQX68_03155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GQX68_03155 PF00925 GTP cyclohydrolase II GQX68_03160 PF01272 Transcription elongation factor, GreA/GreB, C-term GQX68_03160 PF03449 Transcription elongation factor, N-terminal GQX68_03165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX68_03165 PF00306 ATP synthase alpha/beta chain, C terminal domain GQX68_03165 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQX68_03170 PF00213 ATP synthase delta (OSCP) subunit GQX68_03175 PF02021 Uncharacterised protein family UPF0102 GQX68_03180 PF01196 Ribosomal protein L17 GQX68_03185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GQX68_03185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GQX68_03185 PF01000 RNA polymerase Rpb3/RpoA insert domain GQX68_03190 PF00411 Ribosomal protein S11 GQX68_03195 PF00416 Ribosomal protein S13/S18 GQX68_03205 PF00344 SecY translocase GQX68_03210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GQX68_03215 PF00333 Ribosomal protein S5, N-terminal domain GQX68_03215 PF03719 Ribosomal protein S5, C-terminal domain GQX68_03220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GQX68_03225 PF00347 Ribosomal protein L6 GQX68_03230 PF00410 Ribosomal protein S8 GQX68_03235 PF00253 Ribosomal protein S14p/S29e GQX68_03240 PF00281 Ribosomal protein L5 GQX68_03240 PF00673 ribosomal L5P family C-terminus GQX68_03245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GQX68_03250 PF00238 Ribosomal protein L14p/L23e GQX68_03255 PF00366 Ribosomal protein S17 GQX68_03260 PF00831 Ribosomal L29 protein GQX68_03265 PF00252 Ribosomal protein L16p/L10e GQX68_03270 PF07650 KH domain GQX68_03270 PF00189 Ribosomal protein S3, C-terminal domain GQX68_03275 PF00237 Ribosomal protein L22p/L17e GQX68_03280 PF00203 Ribosomal protein S19 GQX68_03285 PF00181 Ribosomal Proteins L2, RNA binding domain GQX68_03285 PF03947 Ribosomal Proteins L2, C-terminal domain GQX68_03290 PF00276 Ribosomal protein L23 GQX68_03295 PF00573 Ribosomal protein L4/L1 family GQX68_03300 PF00297 Ribosomal protein L3 GQX68_03305 PF00338 Ribosomal protein S10p/S20e GQX68_03310 PF00009 Elongation factor Tu GTP binding domain GQX68_03310 PF03143 Elongation factor Tu C-terminal domain GQX68_03310 PF03144 Elongation factor Tu domain 2 GQX68_03325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GQX68_03325 PF00117 Glutamine amidotransferase class-I GQX68_03340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GQX68_03350 PF00391 PEP-utilising enzyme, mobile domain GQX68_03350 PF02896 PEP-utilising enzyme, TIM barrel domain GQX68_03350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GQX68_03365 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX68_03375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GQX68_03375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GQX68_03375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GQX68_03375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GQX68_03395 PF01548 Transposase GQX68_03395 PF02371 Transposase IS116/IS110/IS902 family GQX68_03400 PF00814 Glycoprotease family GQX68_03415 PF00266 Aminotransferase class-V GQX68_03420 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GQX68_03430 PF00005 ABC transporter GQX68_03435 PF01521 Iron-sulphur cluster biosynthesis GQX68_03440 PF13286 Phosphohydrolase-associated domain GQX68_03440 PF01966 HD domain GQX68_03445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GQX68_03445 PF01872 RibD C-terminal domain GQX68_03455 PF00834 Ribulose-phosphate 3 epimerase family GQX68_03465 PF00132 Bacterial transferase hexapeptide (six repeats) GQX68_03465 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GQX68_03465 PF14602 Hexapeptide repeat of succinyl-transferase GQX68_03495 PF03717 Penicillin-binding Protein dimerisation domain GQX68_03495 PF00905 Penicillin binding protein transpeptidase domain GQX68_03500 PF01522 Polysaccharide deacetylase GQX68_03500 PF00457 Glycosyl hydrolases family 11 GQX68_03500 PF03422 Carbohydrate binding module (family 6) GQX68_03505 PF01078 Magnesium chelatase, subunit ChlI GQX68_03505 PF13335 Magnesium chelatase, subunit ChlI C-terminal GQX68_03515 PF00091 Tubulin/FtsZ family, GTPase domain GQX68_03515 PF12327 FtsZ family, C-terminal domain GQX68_03530 PF02130 Uncharacterized protein family UPF0054 GQX68_03535 PF13085 2Fe-2S iron-sulfur cluster binding domain GQX68_03550 PF04608 Phosphatidylglycerophosphatase A GQX68_03555 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GQX68_03555 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GQX68_03560 PF00486 Transcriptional regulatory protein, C terminal GQX68_03560 PF00072 Response regulator receiver domain GQX68_03580 PF01702 Queuine tRNA-ribosyltransferase GQX68_03590 PF05193 Peptidase M16 inactive domain GQX68_03590 PF00675 Insulinase (Peptidase family M16) GQX68_03595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GQX68_03595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GQX68_03605 PF01654 Cytochrome bd terminal oxidase subunit I GQX68_03610 PF02322 Cytochrome bd terminal oxidase subunit II GQX68_03615 PF01926 50S ribosome-binding GTPase GQX68_03615 PF07650 KH domain GQX68_03655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQX68_03655 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_03660 PF02899 Phage integrase, N-terminal SAM-like domain GQX68_03660 PF00589 Phage integrase family GQX68_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_03680 PF10417 C-terminal domain of 1-Cys peroxiredoxin GQX68_03680 PF00578 AhpC/TSA family GQX68_03690 PF00462 Glutaredoxin GQX68_03695 PF01687 Riboflavin kinase GQX68_03695 PF06574 FAD synthetase GQX68_03700 PF01252 Signal peptidase (SPase) II GQX68_03705 PF00675 Insulinase (Peptidase family M16) GQX68_03705 PF05193 Peptidase M16 inactive domain GQX68_03715 PF00551 Formyl transferase GQX68_03735 PF01668 SmpB protein GQX68_03740 PF01790 Prolipoprotein diacylglyceryl transferase GQX68_03745 PF00005 ABC transporter GQX68_03745 PF00664 ABC transporter transmembrane region GQX68_03770 PF00436 Single-strand binding protein family GQX68_03775 PF00701 Dihydrodipicolinate synthetase family GQX68_03780 PF01653 NAD-dependent DNA ligase adenylation domain GQX68_03780 PF12826 Helix-hairpin-helix motif GQX68_03780 PF03120 NAD-dependent DNA ligase OB-fold domain GQX68_03780 PF00533 BRCA1 C Terminus (BRCT) domain GQX68_03780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GQX68_03785 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQX68_03795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GQX68_03795 PF02811 PHP domain GQX68_03795 PF14579 Helix-hairpin-helix motif GQX68_03795 PF07733 Bacterial DNA polymerase III alpha NTPase domain GQX68_03800 PF01250 Ribosomal protein S6 GQX68_03805 PF01084 Ribosomal protein S18 GQX68_03810 PF01281 Ribosomal protein L9, N-terminal domain GQX68_03810 PF03948 Ribosomal protein L9, C-terminal domain GQX68_03825 PF10397 Adenylosuccinate lyase C-terminus GQX68_03825 PF00206 Lyase GQX68_03835 PF13685 Iron-containing alcohol dehydrogenase GQX68_03840 PF01546 Peptidase family M20/M25/M40 GQX68_03840 PF07687 Peptidase dimerisation domain GQX68_03845 PF00633 Helix-hairpin-helix motif GQX68_03845 PF00730 HhH-GPD superfamily base excision DNA repair protein GQX68_03845 PF10576 Iron-sulfur binding domain of endonuclease III GQX68_03855 PF18324 Hypothetical protein TT1725 GQX68_03855 PF00180 Isocitrate/isopropylmalate dehydrogenase GQX68_03870 PF07498 Rho termination factor, N-terminal domain GQX68_03870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQX68_03870 PF07497 Rho termination factor, RNA-binding domain GQX68_03880 PF00639 PPIC-type PPIASE domain GQX68_03885 PF00886 Ribosomal protein S16 GQX68_03890 PF00348 Polyprenyl synthetase GQX68_03895 PF01025 GrpE GQX68_03900 PF00579 tRNA synthetases class I (W and Y) GQX68_03910 PF00034 Cytochrome c GQX68_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX68_03930 PF03129 Anticodon binding domain GQX68_03935 PF01648 4'-phosphopantetheinyl transferase superfamily GQX68_03945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX68_03945 PF13244 Domain of unknown function (DUF4040) GQX68_03945 PF00361 Proton-conducting membrane transporter GQX68_03965 PF01300 Telomere recombination GQX68_03985 PF00271 Helicase conserved C-terminal domain GQX68_03985 PF00270 DEAD/DEAH box helicase GQX68_03985 PF17191 RecG wedge domain GQX68_04030 PF01145 SPFH domain / Band 7 family GQX68_04035 PF01145 SPFH domain / Band 7 family GQX68_04040 PF13180 PDZ domain GQX68_04065 PF12344 Ultra-violet resistance protein B GQX68_04065 PF17757 UvrB interaction domain GQX68_04065 PF02151 UvrB/uvrC motif GQX68_04065 PF04851 Type III restriction enzyme, res subunit GQX68_04065 PF00271 Helicase conserved C-terminal domain GQX68_04080 PF01548 Transposase GQX68_04080 PF02371 Transposase IS116/IS110/IS902 family GQX68_04085 PF03918 Cytochrome C biogenesis protein GQX68_04095 PF00111 2Fe-2S iron-sulfur cluster binding domain GQX68_04105 PF08245 Mur ligase middle domain GQX68_04130 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX68_04135 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX68_04140 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX68_04145 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GQX68_04150 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GQX68_04160 PF01921 tRNA synthetases class I (K) GQX68_04180 PF02272 DHHA1 domain GQX68_04180 PF01411 tRNA synthetases class II (A) GQX68_04180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQX68_04190 PF01632 Ribosomal protein L35 GQX68_04195 PF00453 Ribosomal protein L20 GQX68_04200 PF00551 Formyl transferase GQX68_04200 PF02911 Formyl transferase, C-terminal domain GQX68_04205 PF02142 MGS-like domain GQX68_04205 PF01808 AICARFT/IMPCHase bienzyme GQX68_04215 PF01676 Metalloenzyme superfamily GQX68_04215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GQX68_04220 PF00698 Acyl transferase domain GQX68_04225 PF01197 Ribosomal protein L31 GQX68_04230 PF01513 ATP-NAD kinase GQX68_04245 PF13276 HTH-like domain GQX68_04245 PF00665 Integrase core domain GQX68_04245 PF13333 Integrase core domain GQX68_04290 PF00085 Thioredoxin GQX68_04300 PF03070 TENA/THI-4/PQQC family GQX68_04315 PF00186 Dihydrofolate reductase GQX68_04325 PF18073 Rubredoxin metal binding domain GQX68_04330 PF00448 SRP54-type protein, GTPase domain GQX68_04330 PF02881 SRP54-type protein, helical bundle domain GQX68_04335 PF01592 NifU-like N terminal domain GQX68_04340 PF01521 Iron-sulphur cluster biosynthesis GQX68_04345 PF07743 HSCB C-terminal oligomerisation domain GQX68_04350 PF00012 Hsp70 protein GQX68_04355 PF10502 Signal peptidase, peptidase S26 GQX68_04360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GQX68_04360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GQX68_04410 PF01509 TruB family pseudouridylate synthase (N terminal domain) GQX68_04410 PF16198 tRNA pseudouridylate synthase B C-terminal domain GQX68_04415 PF00312 Ribosomal protein S15 GQX68_04420 PF01138 3' exoribonuclease family, domain 1 GQX68_04420 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GQX68_04420 PF00013 KH domain GQX68_04420 PF03725 3' exoribonuclease family, domain 2 GQX68_04420 PF00575 S1 RNA binding domain GQX68_04450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GQX68_04450 PF02769 AIR synthase related protein, C-terminal domain GQX68_04450 PF00586 AIR synthase related protein, N-terminal domain GQX68_04465 PF17755 UvrA DNA-binding domain GQX68_04465 PF17760 UvrA interaction domain GQX68_04495 PF02875 Mur ligase family, glutamate ligase domain GQX68_04495 PF08245 Mur ligase middle domain GQX68_04500 PF01053 Cys/Met metabolism PLP-dependent enzyme GQX68_04510 PF00012 Hsp70 protein GQX68_04515 PF12111 Polyribonucleotide phosphorylase C terminal GQX68_04515 PF10150 Ribonuclease E/G family GQX68_04515 PF00575 S1 RNA binding domain GQX68_04520 PF00471 Ribosomal protein L33 GQX68_04545 PF01297 Zinc-uptake complex component A periplasmic GQX68_04550 PF00005 ABC transporter GQX68_04555 PF03109 ABC1 family GQX68_04605 PF08240 Alcohol dehydrogenase GroES-like domain GQX68_04605 PF00107 Zinc-binding dehydrogenase GQX68_04610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GQX68_04615 PF01027 Inhibitor of apoptosis-promoting Bax1 GQX68_04620 PF00588 SpoU rRNA Methylase family GQX68_04620 PF08032 RNA 2'-O ribose methyltransferase substrate binding GQX68_04630 PF01118 Semialdehyde dehydrogenase, NAD binding domain GQX68_04630 PF02774 Semialdehyde dehydrogenase, dimerisation domain GQX68_04650 PF13520 Amino acid permease GQX68_04665 PF13840 ACT domain GQX68_04665 PF01842 ACT domain GQX68_04665 PF00696 Amino acid kinase family GQX68_04685 PF00580 UvrD/REP helicase N-terminal domain GQX68_04685 PF13361 UvrD-like helicase C-terminal domain GQX68_04695 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GQX68_04700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GQX68_04705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX68_04705 PF00361 Proton-conducting membrane transporter GQX68_04710 PF00361 Proton-conducting membrane transporter GQX68_04715 PF00361 Proton-conducting membrane transporter GQX68_04720 PF02237 Biotin protein ligase C terminal domain GQX68_04720 PF08279 HTH domain GQX68_04720 PF03099 Biotin/lipoate A/B protein ligase family GQX68_04720 PF02237 Biotin protein ligase C terminal domain GQX68_04720 PF03099 Biotin/lipoate A/B protein ligase family GQX68_04720 PF08279 HTH domain GQX68_04725 PF03100 CcmE GQX68_04755 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GQX68_04755 PF10531 SLBB domain GQX68_04755 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GQX68_04760 PF00707 Translation initiation factor IF-3, C-terminal domain GQX68_04760 PF05198 Translation initiation factor IF-3, N-terminal domain GQX68_04765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQX68_04765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQX68_04765 PF03129 Anticodon binding domain GQX68_04775 PF12838 4Fe-4S dicluster domain GQX68_04780 PF01926 50S ribosome-binding GTPase GQX68_04780 PF10396 GTP-binding protein TrmE N-terminus GQX68_04780 PF12631 MnmE helical domain GQX68_04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_04800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GQX68_04800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GQX68_04805 PF02504 Fatty acid synthesis protein GQX68_04810 PF01783 Ribosomal L32p protein family GQX68_04815 PF02405 Permease MlaE GQX68_04820 PF00005 ABC transporter GQX68_04830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GQX68_04830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GQX68_04830 PF13288 DXP reductoisomerase C-terminal domain GQX68_04845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX68_04855 PF00266 Aminotransferase class-V GQX68_04865 PF01523 Putative modulator of DNA gyrase GQX68_04895 PF00476 DNA polymerase family A GQX68_04895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GQX68_04895 PF01367 5'-3' exonuclease, C-terminal SAM fold GQX68_04900 PF13276 HTH-like domain GQX68_04900 PF00665 Integrase core domain GQX68_04900 PF13333 Integrase core domain GQX68_04905 PF00665 Integrase core domain GQX68_04905 PF13276 HTH-like domain GQX68_04905 PF13333 Integrase core domain GQX68_04935 PF00557 Metallopeptidase family M24 GQX68_04935 PF01321 Creatinase/Prolidase N-terminal domain GQX68_04940 PF13932 GidA associated domain GQX68_04940 PF01134 Glucose inhibited division protein A GQX68_04950 PF03023 Lipid II flippase MurJ GQX68_04960 PF04860 Phage portal protein GQX68_04975 PF03099 Biotin/lipoate A/B protein ligase family GQX68_04980 PF17676 LD-carboxypeptidase C-terminal domain GQX68_04980 PF02016 LD-carboxypeptidase N-terminal domain GQX68_04995 PF00528 Binding-protein-dependent transport system inner membrane component GQX68_05005 PF01245 Ribosomal protein L19 GQX68_05010 PF01746 tRNA (Guanine-1)-methyltransferase GQX68_05015 PF01259 SAICAR synthetase GQX68_05020 PF00586 AIR synthase related protein, N-terminal domain GQX68_05020 PF02769 AIR synthase related protein, C-terminal domain GQX68_05035 PF00571 CBS domain GQX68_05035 PF03471 Transporter associated domain GQX68_05040 PF01208 Uroporphyrinogen decarboxylase (URO-D) GQX68_05045 PF00155 Aminotransferase class I and II GQX68_05070 PF00464 Serine hydroxymethyltransferase GQX68_05100 PF01545 Cation efflux family GQX68_05110 PF02660 Glycerol-3-phosphate acyltransferase GQX68_05115 PF01235 Sodium:alanine symporter family GQX68_05120 PF01235 Sodium:alanine symporter family GQX68_05125 PF01066 CDP-alcohol phosphatidyltransferase GQX68_05130 PF02666 Phosphatidylserine decarboxylase GQX68_05135 PF00154 recA bacterial DNA recombination protein GQX68_05140 PF00226 DnaJ domain GQX68_05140 PF01556 DnaJ C terminal domain GQX68_05140 PF00684 DnaJ central domain GQX68_05145 PF02875 Mur ligase family, glutamate ligase domain GQX68_05145 PF08245 Mur ligase middle domain GQX68_05160 PF03364 Polyketide cyclase / dehydrase and lipid transport GQX68_05165 PF13462 Thioredoxin GQX68_05195 PF12169 DNA polymerase III subunits gamma and tau domain III GQX68_05200 PF02575 YbaB/EbfC DNA-binding family GQX68_05205 PF13505 Outer membrane protein beta-barrel domain GQX68_05210 PF04545 Sigma-70, region 4 GQX68_05210 PF00140 Sigma-70 factor, region 1.2 GQX68_05210 PF04542 Sigma-70 region 2 GQX68_05220 PF02768 DNA polymerase III beta subunit, C-terminal domain GQX68_05220 PF02767 DNA polymerase III beta subunit, central domain GQX68_05220 PF00712 DNA polymerase III beta subunit, N-terminal domain GQX68_05225 PF01416 tRNA pseudouridine synthase GQX68_05240 PF00032 Cytochrome b(C-terminal)/b6/petD GQX68_05240 PF02167 Cytochrome C1 family GQX68_05240 PF00033 Cytochrome b/b6/petB GQX68_05245 PF00033 Cytochrome b/b6/petB GQX68_05245 PF00032 Cytochrome b(C-terminal)/b6/petD GQX68_05250 PF01556 DnaJ C terminal domain GQX68_05250 PF00226 DnaJ domain GQX68_05250 PF00684 DnaJ central domain GQX68_05260 PF00226 DnaJ domain GQX68_05260 PF01556 DnaJ C terminal domain GQX68_05260 PF00684 DnaJ central domain GQX68_05270 PF13393 Histidyl-tRNA synthetase GQX68_05270 PF03129 Anticodon binding domain GQX68_05275 PF01975 Survival protein SurE GQX68_05280 PF02978 Signal peptide binding domain GQX68_05280 PF02881 SRP54-type protein, helical bundle domain GQX68_05280 PF00448 SRP54-type protein, GTPase domain GQX68_05290 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_05295 PF07977 FabA-like domain GQX68_05305 PF01103 Surface antigen GQX68_05305 PF07244 Surface antigen variable number repeat GQX68_05310 PF17820 PDZ domain GQX68_05310 PF02163 Peptidase family M50 GQX68_05325 PF00216 Bacterial DNA-binding protein GQX68_05330 PF00575 S1 RNA binding domain GQX68_05335 PF02390 Putative methyltransferase GQX68_05345 PF01258 Prokaryotic dksA/traR C4-type zinc finger GQX68_05360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GQX68_05360 PF01926 50S ribosome-binding GTPase GQX68_05370 PF03232 Ubiquinone biosynthesis protein COQ7 GQX68_05375 PF00953 Glycosyl transferase family 4 GQX68_05380 PF01351 Ribonuclease HII GQX68_05400 PF00361 Proton-conducting membrane transporter GQX68_05405 PF01098 Cell cycle protein GQX68_05410 PF13537 Glutamine amidotransferase domain GQX68_05410 PF00156 Phosphoribosyl transferase domain GQX68_05415 PF02245 Methylpurine-DNA glycosylase (MPG) GQX68_05425 PF05496 Holliday junction DNA helicase RuvB P-loop domain GQX68_05425 PF05491 RuvB C-terminal winged helix domain GQX68_05425 PF17864 RuvB AAA lid domain GQX68_05430 PF01330 RuvA N terminal domain GQX68_05430 PF07499 RuvA, C-terminal domain GQX68_05445 PF00579 tRNA synthetases class I (W and Y) GQX68_05465 PF00293 NUDIX domain GQX68_05470 PF01026 TatD related DNase GQX68_05475 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GQX68_05475 PF00056 lactate/malate dehydrogenase, NAD binding domain GQX68_05480 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GQX68_05485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GQX68_05490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GQX68_05495 PF01230 HIT domain GQX68_05510 PF01225 Mur ligase family, catalytic domain GQX68_05510 PF02875 Mur ligase family, glutamate ligase domain GQX68_05510 PF08245 Mur ligase middle domain GQX68_05515 PF08338 Domain of unknown function (DUF1731) GQX68_05515 PF01370 NAD dependent epimerase/dehydratase family GQX68_05530 PF01751 Toprim domain GQX68_05530 PF01396 Topoisomerase DNA binding C4 zinc finger GQX68_05530 PF13368 Topoisomerase C-terminal repeat GQX68_05530 PF01131 DNA topoisomerase GQX68_05535 PF17773 UPF0176 acylphosphatase like domain GQX68_05535 PF00581 Rhodanese-like domain GQX68_05540 PF00528 Binding-protein-dependent transport system inner membrane component GQX68_05550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQX68_05565 PF04379 ApaG domain GQX68_05570 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GQX68_05570 PF02222 ATP-grasp domain GQX68_05575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GQX68_05575 PF02542 YgbB family GQX68_05580 PF01594 AI-2E family transporter GQX68_05590 PF00589 Phage integrase family GQX68_05590 PF02899 Phage integrase, N-terminal SAM-like domain GQX68_05600 PF01649 Ribosomal protein S20 GQX68_05605 PF00285 Citrate synthase, C-terminal domain GQX68_05620 PF01039 Carboxyl transferase domain GQX68_05630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GQX68_05630 PF06827 Zinc finger found in FPG and IleRS GQX68_05630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GQX68_05635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GQX68_05635 PF01243 Pyridoxamine 5'-phosphate oxidase GQX68_05645 PF00753 Metallo-beta-lactamase superfamily GQX68_05645 PF03772 Competence protein GQX68_05655 PF01479 S4 domain GQX68_05655 PF00849 RNA pseudouridylate synthase GQX68_05660 PF01219 Prokaryotic diacylglycerol kinase GQX68_05670 PF00162 Phosphoglycerate kinase GQX68_05680 PF03060 Nitronate monooxygenase GQX68_05695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GQX68_05715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQX68_05715 PF00364 Biotin-requiring enzyme GQX68_05715 PF02817 e3 binding domain GQX68_05730 PF02132 RecR protein GQX68_05730 PF13662 Toprim domain GQX68_05740 PF00334 Nucleoside diphosphate kinase GQX68_05750 PF00762 Ferrochelatase GQX68_05765 PF00227 Proteasome subunit GQX68_05770 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_05770 PF07724 AAA domain (Cdc48 subfamily) GQX68_05770 PF10431 C-terminal, D2-small domain, of ClpB protein GQX68_05780 PF00348 Polyprenyl synthetase GQX68_05785 PF00550 Phosphopantetheine attachment site GQX68_05790 PF00109 Beta-ketoacyl synthase, N-terminal domain GQX68_05790 PF02801 Beta-ketoacyl synthase, C-terminal domain GQX68_05800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GQX68_05805 PF02511 Thymidylate synthase complementing protein GQX68_05815 PF00270 DEAD/DEAH box helicase GQX68_05815 PF00271 Helicase conserved C-terminal domain GQX68_05815 PF18074 Primosomal protein N C-terminal domain GQX68_05815 PF17764 3′ DNA-binding domain (3′BD) GQX68_05815 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GQX68_05820 PF00355 Rieske [2Fe-2S] domain GQX68_05820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GQX68_05825 PF00521 DNA gyrase/topoisomerase IV, subunit A GQX68_05825 PF03989 DNA gyrase C-terminal domain, beta-propeller GQX68_05855 PF02632 BioY family GQX68_05860 PF00881 Nitroreductase family GQX68_05865 PF01678 Diaminopimelate epimerase GQX68_05870 PF00549 CoA-ligase GQX68_05870 PF02629 CoA binding domain GQX68_05875 PF08442 ATP-grasp domain GQX68_05875 PF00549 CoA-ligase GQX68_05890 PF04452 RNA methyltransferase GQX68_05905 PF01218 Coproporphyrinogen III oxidase GQX68_05910 PF00512 His Kinase A (phospho-acceptor) domain GQX68_05910 PF08448 PAS fold GQX68_05910 PF13188 PAS domain GQX68_05910 PF00072 Response regulator receiver domain GQX68_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX68_05915 PF13614 AAA domain GQX68_05920 PF17762 HTH domain found in ParB protein GQX68_05920 PF02195 ParB-like nuclease domain GQX68_05940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQX68_05945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQX68_05975 PF12704 MacB-like periplasmic core domain GQX68_05975 PF02687 FtsX-like permease family GQX68_05990 PF00231 ATP synthase GQX68_05995 PF01523 Putative modulator of DNA gyrase GQX68_06000 PF00313 'Cold-shock' DNA-binding domain GQX68_06005 PF00271 Helicase conserved C-terminal domain GQX68_06005 PF00270 DEAD/DEAH box helicase GQX68_06010 PF10431 C-terminal, D2-small domain, of ClpB protein GQX68_06010 PF07724 AAA domain (Cdc48 subfamily) GQX68_06010 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_06010 PF02861 Clp amino terminal domain, pathogenicity island component GQX68_06010 PF17871 AAA lid domain GQX68_06015 PF01791 DeoC/LacD family aldolase GQX68_06025 PF01180 Dihydroorotate dehydrogenase GQX68_06030 PF14622 Ribonuclease-III-like GQX68_06030 PF00035 Double-stranded RNA binding motif GQX68_06040 PF13091 PLD-like domain GQX68_06065 PF00210 Ferritin-like domain GQX68_06075 PF00999 Sodium/hydrogen exchanger family GQX68_06075 PF02254 TrkA-N domain GQX68_06085 PF02223 Thymidylate kinase GQX68_06095 PF00004 ATPase family associated with various cellular activities (AAA) GQX68_06095 PF06480 FtsH Extracellular GQX68_06095 PF01434 Peptidase family M41 GQX68_06095 PF17862 AAA+ lid domain GQX68_06100 PF01171 PP-loop family GQX68_06105 PF00691 OmpA family GQX68_06130 PF00719 Inorganic pyrophosphatase GQX68_06140 PF09312 SurA N-terminal domain GQX68_06140 PF00639 PPIC-type PPIASE domain GQX68_06145 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQX68_06170 PF03717 Penicillin-binding Protein dimerisation domain GQX68_06170 PF00905 Penicillin binding protein transpeptidase domain GQX68_06175 PF02401 LytB protein GQX68_06190 PF00183 Hsp90 protein GQX68_06200 PF00155 Aminotransferase class I and II GQX68_06210 PF01132 Elongation factor P (EF-P) OB domain GQX68_06210 PF09285 Elongation factor P, C-terminal GQX68_06210 PF08207 Elongation factor P (EF-P) KOW-like domain GQX68_06215 PF01782 RimM N-terminal domain GQX68_06215 PF05239 PRC-barrel domain GQX68_06220 PF00202 Aminotransferase class-III GQX68_06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQX68_06225 PF00989 PAS fold GQX68_06225 PF00512 His Kinase A (phospho-acceptor) domain GQX68_06230 PF00578 AhpC/TSA family GQX68_06235 PF02463 RecF/RecN/SMC N terminal domain GQX68_06255 PF03631 Virulence factor BrkB GQX68_06265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQX68_06265 PF02142 MGS-like domain GQX68_06265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GQX68_06280 PF04546 Sigma-70, non-essential region GQX68_06280 PF00140 Sigma-70 factor, region 1.2 GQX68_06280 PF04539 Sigma-70 region 3 GQX68_06280 PF04542 Sigma-70 region 2 GQX68_06280 PF03979 Sigma-70 factor, region 1.1 GQX68_06280 PF04545 Sigma-70, region 4 GQX68_06285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GQX68_06295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQX68_06295 PF13244 Domain of unknown function (DUF4040) GQX68_06295 PF00361 Proton-conducting membrane transporter GQX68_06300 PF03334 Na+/H+ antiporter subunit GQX68_06310 PF01192 RNA polymerase Rpb6 GQX68_06320 PF00731 AIR carboxylase GQX68_06325 PF08676 MutL C terminal dimerisation domain GQX68_06325 PF01119 DNA mismatch repair protein, C-terminal domain GQX68_06330 PF02779 Transketolase, pyrimidine binding domain GQX68_06330 PF16870 2-oxoglutarate dehydrogenase C-terminal GQX68_06330 PF00676 Dehydrogenase E1 component GQX68_06330 PF16078 2-oxoglutarate dehydrogenase N-terminus GQX68_06360 PF13784 Fic/DOC family N-terminal GQX68_06360 PF02661 Fic/DOC family GQX68_06365 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GQX68_06370 PF01040 UbiA prenyltransferase family GQX68_06375 PF02033 Ribosome-binding factor A GQX68_06380 PF04760 Translation initiation factor IF-2, N-terminal region GQX68_06380 PF11987 Translation-initiation factor 2 GQX68_06380 PF00009 Elongation factor Tu GTP binding domain GQX68_06385 PF13184 NusA-like KH domain GQX68_06385 PF08529 NusA N-terminal domain GQX68_06385 PF00575 S1 RNA binding domain GQX68_06390 PF00873 AcrB/AcrD/AcrF family GQX68_06400 PF00120 Glutamine synthetase, catalytic domain