locus-tag class description ONI09_00005 PF00308 Bacterial dnaA protein ONI09_00005 PF08299 Bacterial dnaA protein helix-turn-helix ONI09_00005 PF11638 DnaA N-terminal domain ONI09_00020 PF00925 GTP cyclohydrolase II ONI09_00025 PF04335 VirB8 protein ONI09_00040 PF00437 Type II/IV secretion system protein ONI09_00045 PF02534 Type IV secretory system Conjugative DNA transfer ONI09_00055 PF13847 Methyltransferase domain ONI09_00055 PF17827 PrmC N-terminal domain ONI09_00065 PF00164 Ribosomal protein S12/S23 ONI09_00070 PF00177 Ribosomal protein S7p/S5e ONI09_00075 PF03144 Elongation factor Tu domain 2 ONI09_00075 PF00009 Elongation factor Tu GTP binding domain ONI09_00075 PF00679 Elongation factor G C-terminus ONI09_00075 PF14492 Elongation Factor G, domain II ONI09_00075 PF03764 Elongation factor G, domain IV ONI09_00080 PF00009 Elongation factor Tu GTP binding domain ONI09_00080 PF03144 Elongation factor Tu domain 2 ONI09_00080 PF03143 Elongation factor Tu C-terminal domain ONI09_00095 PF00467 KOW motif ONI09_00095 PF02357 Transcription termination factor nusG ONI09_00100 PF00298 Ribosomal protein L11, RNA binding domain ONI09_00100 PF03946 Ribosomal protein L11, N-terminal domain ONI09_00105 PF00687 Ribosomal protein L1p/L10e family ONI09_00110 PF00466 Ribosomal protein L10 ONI09_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain ONI09_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain ONI09_00120 PF04560 RNA polymerase Rpb2, domain 7 ONI09_00120 PF00562 RNA polymerase Rpb2, domain 6 ONI09_00120 PF04565 RNA polymerase Rpb2, domain 3 ONI09_00120 PF04561 RNA polymerase Rpb2, domain 2 ONI09_00120 PF04563 RNA polymerase beta subunit ONI09_00120 PF10385 RNA polymerase beta subunit external 1 domain ONI09_00120 PF05000 RNA polymerase Rpb1, domain 4 ONI09_00120 PF04983 RNA polymerase Rpb1, domain 3 ONI09_00120 PF00623 RNA polymerase Rpb1, domain 2 ONI09_00120 PF04997 RNA polymerase Rpb1, domain 1 ONI09_00120 PF04998 RNA polymerase Rpb1, domain 5 ONI09_00125 PF01207 Dihydrouridine synthase (Dus) ONI09_00135 PF02403 Seryl-tRNA synthetase N-terminal domain ONI09_00135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ONI09_00140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ONI09_00140 PF02843 Phosphoribosylglycinamide synthetase, C domain ONI09_00140 PF02844 Phosphoribosylglycinamide synthetase, N domain ONI09_00155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ONI09_00155 PF14572 Phosphoribosyl synthetase-associated domain ONI09_00160 PF02686 Glu-tRNAGln amidotransferase C subunit ONI09_00165 PF04052 TolB amino-terminal domain ONI09_00165 PF07676 WD40-like Beta Propeller Repeat ONI09_00170 PF12706 Beta-lactamase superfamily domain ONI09_00170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ONI09_00170 PF17770 Ribonuclease J C-terminal domain ONI09_00175 PF00226 DnaJ domain ONI09_00175 PF01556 DnaJ C terminal domain ONI09_00175 PF00684 DnaJ central domain ONI09_00210 PF00883 Cytosol aminopeptidase family, catalytic domain ONI09_00210 PF02789 Cytosol aminopeptidase family, N-terminal domain ONI09_00220 PF00216 Bacterial DNA-binding protein ONI09_00230 PF01551 Peptidase family M23 ONI09_00235 PF08264 Anticodon-binding domain of tRNA ONI09_00235 PF00133 tRNA synthetases class I (I, L, M and V) ONI09_00235 PF13603 Leucyl-tRNA synthetase, Domain 2 ONI09_00235 PF09334 tRNA synthetases class I (M) ONI09_00250 PF13276 HTH-like domain ONI09_00250 PF00665 Integrase core domain ONI09_00250 PF13333 Integrase core domain ONI09_00255 PF13276 HTH-like domain ONI09_00255 PF00665 Integrase core domain ONI09_00255 PF13333 Integrase core domain ONI09_00265 PF01527 Transposase ONI09_00270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ONI09_00280 PF00380 Ribosomal protein S9/S16 ONI09_00285 PF00572 Ribosomal protein L13 ONI09_00295 PF10691 Protein of unknown function (DUF2497) ONI09_00300 PF01728 FtsJ-like methyltransferase ONI09_00310 PF01509 TruB family pseudouridylate synthase (N terminal domain) ONI09_00310 PF16198 tRNA pseudouridylate synthase B C-terminal domain ONI09_00345 PF03109 ABC1 family ONI09_00350 PF00005 ABC transporter ONI09_00355 PF01297 Zinc-uptake complex component A periplasmic ONI09_00365 PF00471 Ribosomal protein L33 ONI09_00370 PF10150 Ribonuclease E/G family ONI09_00370 PF12111 Polyribonucleotide phosphorylase C terminal ONI09_00370 PF00575 S1 RNA binding domain ONI09_00375 PF00012 Hsp70 protein ONI09_00385 PF01053 Cys/Met metabolism PLP-dependent enzyme ONI09_00390 PF02875 Mur ligase family, glutamate ligase domain ONI09_00390 PF08245 Mur ligase middle domain ONI09_00420 PF01118 Semialdehyde dehydrogenase, NAD binding domain ONI09_00420 PF02774 Semialdehyde dehydrogenase, dimerisation domain ONI09_00440 PF00588 SpoU rRNA Methylase family ONI09_00440 PF08032 RNA 2'-O ribose methyltransferase substrate binding ONI09_00445 PF01027 Inhibitor of apoptosis-promoting Bax1 ONI09_00450 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ONI09_00455 PF00107 Zinc-binding dehydrogenase ONI09_00455 PF08240 Alcohol dehydrogenase GroES-like domain ONI09_00500 PF01039 Carboxyl transferase domain ONI09_00510 PF06827 Zinc finger found in FPG and IleRS ONI09_00510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ONI09_00510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ONI09_00515 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ONI09_00515 PF01243 Pyridoxamine 5'-phosphate oxidase ONI09_00525 PF03772 Competence protein ONI09_00525 PF00753 Metallo-beta-lactamase superfamily ONI09_00540 PF00849 RNA pseudouridylate synthase ONI09_00545 PF01219 Prokaryotic diacylglycerol kinase ONI09_00565 PF00162 Phosphoglycerate kinase ONI09_00580 PF03060 Nitronate monooxygenase ONI09_00595 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ONI09_00620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ONI09_00620 PF00364 Biotin-requiring enzyme ONI09_00620 PF02817 e3 binding domain ONI09_00635 PF13662 Toprim domain ONI09_00635 PF02132 RecR protein ONI09_00650 PF00334 Nucleoside diphosphate kinase ONI09_00660 PF00762 Ferrochelatase ONI09_00675 PF00227 Proteasome subunit ONI09_00680 PF07724 AAA domain (Cdc48 subfamily) ONI09_00680 PF10431 C-terminal, D2-small domain, of ClpB protein ONI09_00680 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_00690 PF00348 Polyprenyl synthetase ONI09_00695 PF00550 Phosphopantetheine attachment site ONI09_00700 PF00109 Beta-ketoacyl synthase, N-terminal domain ONI09_00700 PF02801 Beta-ketoacyl synthase, C-terminal domain ONI09_00710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ONI09_00715 PF02511 Thymidylate synthase complementing protein ONI09_00725 PF00270 DEAD/DEAH box helicase ONI09_00725 PF00271 Helicase conserved C-terminal domain ONI09_00725 PF17764 3′ DNA-binding domain (3′BD) ONI09_00725 PF18074 Primosomal protein N C-terminal domain ONI09_00725 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ONI09_00730 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ONI09_00730 PF00355 Rieske [2Fe-2S] domain ONI09_00735 PF03989 DNA gyrase C-terminal domain, beta-propeller ONI09_00735 PF00521 DNA gyrase/topoisomerase IV, subunit A ONI09_00750 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_00760 PF01926 50S ribosome-binding GTPase ONI09_00760 PF12631 MnmE helical domain ONI09_00760 PF10396 GTP-binding protein TrmE N-terminus ONI09_00765 PF12838 4Fe-4S dicluster domain ONI09_00775 PF01509 TruB family pseudouridylate synthase (N terminal domain) ONI09_00775 PF16198 tRNA pseudouridylate synthase B C-terminal domain ONI09_00780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ONI09_00780 PF03129 Anticodon binding domain ONI09_00780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ONI09_00785 PF00707 Translation initiation factor IF-3, C-terminal domain ONI09_00785 PF05198 Translation initiation factor IF-3, N-terminal domain ONI09_00790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ONI09_00790 PF10531 SLBB domain ONI09_00790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ONI09_00820 PF03100 CcmE ONI09_00825 PF02237 Biotin protein ligase C terminal domain ONI09_00825 PF03099 Biotin/lipoate A/B protein ligase family ONI09_00825 PF08279 HTH domain ONI09_00830 PF00361 Proton-conducting membrane transporter ONI09_00835 PF00361 Proton-conducting membrane transporter ONI09_00840 PF00361 Proton-conducting membrane transporter ONI09_00840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ONI09_00845 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ONI09_00850 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ONI09_00855 PF00580 UvrD/REP helicase N-terminal domain ONI09_00855 PF13361 UvrD-like helicase C-terminal domain ONI09_00870 PF00696 Amino acid kinase family ONI09_00870 PF01842 ACT domain ONI09_00870 PF13840 ACT domain ONI09_00890 PF13520 Amino acid permease ONI09_00900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ONI09_00900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ONI09_00905 PF02504 Fatty acid synthesis protein ONI09_00910 PF01783 Ribosomal L32p protein family ONI09_00915 PF02405 Permease MlaE ONI09_00920 PF00005 ABC transporter ONI09_00920 PF08402 TOBE domain ONI09_00930 PF13288 DXP reductoisomerase C-terminal domain ONI09_00930 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ONI09_00930 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ONI09_00940 PF00266 Aminotransferase class-V ONI09_00950 PF01523 Putative modulator of DNA gyrase ONI09_00980 PF01367 5'-3' exonuclease, C-terminal SAM fold ONI09_00980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ONI09_00980 PF00476 DNA polymerase family A ONI09_00985 PF13276 HTH-like domain ONI09_00985 PF00665 Integrase core domain ONI09_00985 PF13333 Integrase core domain ONI09_00990 PF13276 HTH-like domain ONI09_00990 PF00665 Integrase core domain ONI09_00990 PF13333 Integrase core domain ONI09_01000 PF01527 Transposase ONI09_01025 PF00557 Metallopeptidase family M24 ONI09_01025 PF01321 Creatinase/Prolidase N-terminal domain ONI09_01040 PF03023 Lipid II flippase MurJ ONI09_01050 PF04860 Phage portal protein ONI09_01065 PF03099 Biotin/lipoate A/B protein ligase family ONI09_01070 PF17676 LD-carboxypeptidase C-terminal domain ONI09_01070 PF02016 LD-carboxypeptidase N-terminal domain ONI09_01085 PF00528 Binding-protein-dependent transport system inner membrane component ONI09_01090 PF01245 Ribosomal protein L19 ONI09_01095 PF01746 tRNA (Guanine-1)-methyltransferase ONI09_01100 PF01259 SAICAR synthetase ONI09_01105 PF00586 AIR synthase related protein, N-terminal domain ONI09_01105 PF02769 AIR synthase related protein, C-terminal domain ONI09_01120 PF00571 CBS domain ONI09_01120 PF03471 Transporter associated domain ONI09_01125 PF01208 Uroporphyrinogen decarboxylase (URO-D) ONI09_01130 PF00155 Aminotransferase class I and II ONI09_01165 PF00464 Serine hydroxymethyltransferase ONI09_01200 PF01545 Cation efflux family ONI09_01210 PF02660 Glycerol-3-phosphate acyltransferase ONI09_01215 PF01235 Sodium:alanine symporter family ONI09_01220 PF01235 Sodium:alanine symporter family ONI09_01225 PF01066 CDP-alcohol phosphatidyltransferase ONI09_01230 PF02666 Phosphatidylserine decarboxylase ONI09_01235 PF00154 recA bacterial DNA recombination protein ONI09_01240 PF00226 DnaJ domain ONI09_01240 PF01556 DnaJ C terminal domain ONI09_01240 PF00684 DnaJ central domain ONI09_01245 PF02875 Mur ligase family, glutamate ligase domain ONI09_01245 PF08245 Mur ligase middle domain ONI09_01260 PF03364 Polyketide cyclase / dehydrase and lipid transport ONI09_01265 PF13462 Thioredoxin ONI09_01295 PF12169 DNA polymerase III subunits gamma and tau domain III ONI09_01300 PF02575 YbaB/EbfC DNA-binding family ONI09_01315 PF00886 Ribosomal protein S16 ONI09_01320 PF00348 Polyprenyl synthetase ONI09_01325 PF01025 GrpE ONI09_01330 PF00579 tRNA synthetases class I (W and Y) ONI09_01340 PF00034 Cytochrome c ONI09_01360 PF03129 Anticodon binding domain ONI09_01360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ONI09_01365 PF01648 4'-phosphopantetheinyl transferase superfamily ONI09_01375 PF13244 Domain of unknown function (DUF4040) ONI09_01375 PF00361 Proton-conducting membrane transporter ONI09_01375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ONI09_01400 PF01300 Telomere recombination ONI09_01420 PF00270 DEAD/DEAH box helicase ONI09_01420 PF17191 RecG wedge domain ONI09_01420 PF00271 Helicase conserved C-terminal domain ONI09_01460 PF01145 SPFH domain / Band 7 family ONI09_01465 PF01145 SPFH domain / Band 7 family ONI09_01470 PF13180 PDZ domain ONI09_01510 PF00271 Helicase conserved C-terminal domain ONI09_01510 PF17757 UvrB interaction domain ONI09_01510 PF12344 Ultra-violet resistance protein B ONI09_01510 PF04851 Type III restriction enzyme, res subunit ONI09_01510 PF02151 UvrB/uvrC motif ONI09_01525 PF01548 Transposase ONI09_01525 PF02371 Transposase IS116/IS110/IS902 family ONI09_01530 PF03918 Cytochrome C biogenesis protein ONI09_01540 PF00111 2Fe-2S iron-sulfur cluster binding domain ONI09_01550 PF08245 Mur ligase middle domain ONI09_01575 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ONI09_01580 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ONI09_01585 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ONI09_01590 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ONI09_01595 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ONI09_01605 PF01921 tRNA synthetases class I (K) ONI09_01620 PF02272 DHHA1 domain ONI09_01620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ONI09_01620 PF01411 tRNA synthetases class II (A) ONI09_01630 PF01632 Ribosomal protein L35 ONI09_01635 PF00453 Ribosomal protein L20 ONI09_01640 PF02911 Formyl transferase, C-terminal domain ONI09_01640 PF00551 Formyl transferase ONI09_01650 PF01808 AICARFT/IMPCHase bienzyme ONI09_01650 PF02142 MGS-like domain ONI09_01660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ONI09_01660 PF01676 Metalloenzyme superfamily ONI09_01665 PF00698 Acyl transferase domain ONI09_01670 PF01197 Ribosomal protein L31 ONI09_01675 PF01513 ATP-NAD kinase ONI09_01750 PF00085 Thioredoxin ONI09_01760 PF03070 TENA/THI-4/PQQC family ONI09_01770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ONI09_01770 PF00809 Pterin binding enzyme ONI09_01775 PF00186 Dihydrofolate reductase ONI09_01790 PF18073 Rubredoxin metal binding domain ONI09_01795 PF00448 SRP54-type protein, GTPase domain ONI09_01795 PF02881 SRP54-type protein, helical bundle domain ONI09_01800 PF01592 NifU-like N terminal domain ONI09_01805 PF01521 Iron-sulphur cluster biosynthesis ONI09_01810 PF07743 HSCB C-terminal oligomerisation domain ONI09_01810 PF00226 DnaJ domain ONI09_01815 PF00012 Hsp70 protein ONI09_01820 PF10502 Signal peptidase, peptidase S26 ONI09_01825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ONI09_01825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ONI09_01845 PF00579 tRNA synthetases class I (W and Y) ONI09_01865 PF00293 NUDIX domain ONI09_01870 PF01026 TatD related DNase ONI09_01875 PF00056 lactate/malate dehydrogenase, NAD binding domain ONI09_01875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ONI09_01880 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ONI09_01885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ONI09_01890 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ONI09_01895 PF01230 HIT domain ONI09_01910 PF01225 Mur ligase family, catalytic domain ONI09_01910 PF08245 Mur ligase middle domain ONI09_01910 PF02875 Mur ligase family, glutamate ligase domain ONI09_01915 PF08338 Domain of unknown function (DUF1731) ONI09_01915 PF01370 NAD dependent epimerase/dehydratase family ONI09_01930 PF01131 DNA topoisomerase ONI09_01930 PF01751 Toprim domain ONI09_01930 PF13368 Topoisomerase C-terminal repeat ONI09_01930 PF01396 Topoisomerase DNA binding C4 zinc finger ONI09_01940 PF00581 Rhodanese-like domain ONI09_01940 PF17773 UPF0176 acylphosphatase like domain ONI09_01950 PF00528 Binding-protein-dependent transport system inner membrane component ONI09_01960 PF04379 ApaG domain ONI09_01965 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ONI09_01965 PF02222 ATP-grasp domain ONI09_01970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ONI09_01970 PF02542 YgbB family ONI09_01975 PF01594 AI-2E family transporter ONI09_01985 PF02899 Phage integrase, N-terminal SAM-like domain ONI09_01985 PF00589 Phage integrase family ONI09_01995 PF01649 Ribosomal protein S20 ONI09_02000 PF00285 Citrate synthase, C-terminal domain ONI09_02020 PF07499 RuvA, C-terminal domain ONI09_02020 PF01330 RuvA N terminal domain ONI09_02025 PF05491 RuvB C-terminal winged helix domain ONI09_02025 PF05496 Holliday junction DNA helicase RuvB P-loop domain ONI09_02025 PF17864 RuvB AAA lid domain ONI09_02040 PF02245 Methylpurine-DNA glycosylase (MPG) ONI09_02045 PF13537 Glutamine amidotransferase domain ONI09_02045 PF00156 Phosphoribosyl transferase domain ONI09_02050 PF01098 Cell cycle protein ONI09_02055 PF00361 Proton-conducting membrane transporter ONI09_02075 PF01351 Ribonuclease HII ONI09_02080 PF00953 Glycosyl transferase family 4 ONI09_02085 PF03232 Ubiquinone biosynthesis protein COQ7 ONI09_02095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ONI09_02095 PF01926 50S ribosome-binding GTPase ONI09_02110 PF01258 Prokaryotic dksA/traR C4-type zinc finger ONI09_02120 PF02390 Putative methyltransferase ONI09_02125 PF00575 S1 RNA binding domain ONI09_02130 PF00216 Bacterial DNA-binding protein ONI09_02145 PF17820 PDZ domain ONI09_02145 PF02163 Peptidase family M50 ONI09_02150 PF07244 Surface antigen variable number repeat ONI09_02150 PF01103 Surface antigen ONI09_02160 PF07977 FabA-like domain ONI09_02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_02175 PF02978 Signal peptide binding domain ONI09_02175 PF02881 SRP54-type protein, helical bundle domain ONI09_02175 PF00448 SRP54-type protein, GTPase domain ONI09_02180 PF01975 Survival protein SurE ONI09_02185 PF03129 Anticodon binding domain ONI09_02185 PF13393 Histidyl-tRNA synthetase ONI09_02195 PF00226 DnaJ domain ONI09_02195 PF01556 DnaJ C terminal domain ONI09_02195 PF00684 DnaJ central domain ONI09_02205 PF00226 DnaJ domain ONI09_02205 PF01556 DnaJ C terminal domain ONI09_02205 PF00684 DnaJ central domain ONI09_02210 PF00032 Cytochrome b(C-terminal)/b6/petD ONI09_02210 PF00033 Cytochrome b/b6/petB ONI09_02215 PF00032 Cytochrome b(C-terminal)/b6/petD ONI09_02215 PF02167 Cytochrome C1 family ONI09_02215 PF00033 Cytochrome b/b6/petB ONI09_02225 PF01416 tRNA pseudouridine synthase ONI09_02230 PF02768 DNA polymerase III beta subunit, C-terminal domain ONI09_02230 PF02767 DNA polymerase III beta subunit, central domain ONI09_02230 PF00712 DNA polymerase III beta subunit, N-terminal domain ONI09_02240 PF04542 Sigma-70 region 2 ONI09_02240 PF04545 Sigma-70, region 4 ONI09_02240 PF00140 Sigma-70 factor, region 1.2 ONI09_02245 PF13505 Outer membrane protein beta-barrel domain ONI09_02260 PF00639 PPIC-type PPIASE domain ONI09_02270 PF07498 Rho termination factor, N-terminal domain ONI09_02270 PF07497 Rho termination factor, RNA-binding domain ONI09_02270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ONI09_02285 PF00180 Isocitrate/isopropylmalate dehydrogenase ONI09_02285 PF18324 Hypothetical protein TT1725 ONI09_02290 PF10576 Iron-sulfur binding domain of endonuclease III ONI09_02290 PF00633 Helix-hairpin-helix motif ONI09_02290 PF00730 HhH-GPD superfamily base excision DNA repair protein ONI09_02295 PF07687 Peptidase dimerisation domain ONI09_02295 PF01546 Peptidase family M20/M25/M40 ONI09_02300 PF13685 Iron-containing alcohol dehydrogenase ONI09_02310 PF00206 Lyase ONI09_02310 PF10397 Adenylosuccinate lyase C-terminus ONI09_02320 PF01281 Ribosomal protein L9, N-terminal domain ONI09_02320 PF03948 Ribosomal protein L9, C-terminal domain ONI09_02325 PF01084 Ribosomal protein S18 ONI09_02330 PF01250 Ribosomal protein S6 ONI09_02335 PF02811 PHP domain ONI09_02335 PF14579 Helix-hairpin-helix motif ONI09_02335 PF07733 Bacterial DNA polymerase III alpha NTPase domain ONI09_02335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ONI09_02345 PF00749 tRNA synthetases class I (E and Q), catalytic domain ONI09_02350 PF12826 Helix-hairpin-helix motif ONI09_02350 PF01653 NAD-dependent DNA ligase adenylation domain ONI09_02350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ONI09_02350 PF00533 BRCA1 C Terminus (BRCT) domain ONI09_02350 PF03120 NAD-dependent DNA ligase OB-fold domain ONI09_02355 PF00701 Dihydrodipicolinate synthetase family ONI09_02360 PF00436 Single-strand binding protein family ONI09_02385 PF00664 ABC transporter transmembrane region ONI09_02385 PF00005 ABC transporter ONI09_02390 PF01790 Prolipoprotein diacylglyceryl transferase ONI09_02395 PF01668 SmpB protein ONI09_02415 PF00551 Formyl transferase ONI09_02425 PF05193 Peptidase M16 inactive domain ONI09_02425 PF00675 Insulinase (Peptidase family M16) ONI09_02430 PF01252 Signal peptidase (SPase) II ONI09_02435 PF06574 FAD synthetase ONI09_02435 PF01687 Riboflavin kinase ONI09_02440 PF00462 Glutaredoxin ONI09_02450 PF10417 C-terminal domain of 1-Cys peroxiredoxin ONI09_02450 PF00578 AhpC/TSA family ONI09_02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_02465 PF02899 Phage integrase, N-terminal SAM-like domain ONI09_02465 PF00589 Phage integrase family ONI09_02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_02470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ONI09_02515 PF07650 KH domain ONI09_02515 PF01926 50S ribosome-binding GTPase ONI09_02520 PF02322 Cytochrome bd terminal oxidase subunit II ONI09_02525 PF01654 Cytochrome bd terminal oxidase subunit I ONI09_02545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ONI09_02545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ONI09_02550 PF00675 Insulinase (Peptidase family M16) ONI09_02550 PF05193 Peptidase M16 inactive domain ONI09_02560 PF01702 Queuine tRNA-ribosyltransferase ONI09_02590 PF00072 Response regulator receiver domain ONI09_02590 PF00486 Transcriptional regulatory protein, C terminal ONI09_02595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ONI09_02595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ONI09_02600 PF04608 Phosphatidylglycerophosphatase A ONI09_02615 PF13085 2Fe-2S iron-sulfur cluster binding domain ONI09_02620 PF02130 Uncharacterized protein family UPF0054 ONI09_02635 PF12327 FtsZ family, C-terminal domain ONI09_02635 PF00091 Tubulin/FtsZ family, GTPase domain ONI09_02645 PF01078 Magnesium chelatase, subunit ChlI ONI09_02645 PF13335 Magnesium chelatase, subunit ChlI C-terminal ONI09_02650 PF03422 Carbohydrate binding module (family 6) ONI09_02650 PF01522 Polysaccharide deacetylase ONI09_02650 PF00457 Glycosyl hydrolases family 11 ONI09_02655 PF03717 Penicillin-binding Protein dimerisation domain ONI09_02655 PF00905 Penicillin binding protein transpeptidase domain ONI09_02680 PF00132 Bacterial transferase hexapeptide (six repeats) ONI09_02680 PF14602 Hexapeptide repeat of succinyl-transferase ONI09_02680 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ONI09_02690 PF00834 Ribulose-phosphate 3 epimerase family ONI09_02700 PF01872 RibD C-terminal domain ONI09_02700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ONI09_02705 PF01966 HD domain ONI09_02705 PF13286 Phosphohydrolase-associated domain ONI09_02710 PF01521 Iron-sulphur cluster biosynthesis ONI09_02715 PF00005 ABC transporter ONI09_02720 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ONI09_02725 PF00266 Aminotransferase class-V ONI09_02740 PF00814 Glycoprotease family ONI09_02765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ONI09_02765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ONI09_02765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ONI09_02765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ONI09_02775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_02795 PF01348 Type II intron maturase ONI09_02795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_02800 PF00391 PEP-utilising enzyme, mobile domain ONI09_02800 PF02896 PEP-utilising enzyme, TIM barrel domain ONI09_02800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ONI09_02810 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ONI09_02835 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ONI09_02835 PF00117 Glutamine amidotransferase class-I ONI09_02850 PF00009 Elongation factor Tu GTP binding domain ONI09_02850 PF03144 Elongation factor Tu domain 2 ONI09_02850 PF03143 Elongation factor Tu C-terminal domain ONI09_02855 PF00338 Ribosomal protein S10p/S20e ONI09_02860 PF00297 Ribosomal protein L3 ONI09_02865 PF00573 Ribosomal protein L4/L1 family ONI09_02870 PF00276 Ribosomal protein L23 ONI09_02875 PF03947 Ribosomal Proteins L2, C-terminal domain ONI09_02875 PF00181 Ribosomal Proteins L2, RNA binding domain ONI09_02880 PF00203 Ribosomal protein S19 ONI09_02885 PF00237 Ribosomal protein L22p/L17e ONI09_02890 PF00189 Ribosomal protein S3, C-terminal domain ONI09_02890 PF07650 KH domain ONI09_02895 PF00252 Ribosomal protein L16p/L10e ONI09_02900 PF00831 Ribosomal L29 protein ONI09_02905 PF00366 Ribosomal protein S17 ONI09_02910 PF00238 Ribosomal protein L14p/L23e ONI09_02915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ONI09_02920 PF00281 Ribosomal protein L5 ONI09_02920 PF00673 ribosomal L5P family C-terminus ONI09_02925 PF00253 Ribosomal protein S14p/S29e ONI09_02930 PF00410 Ribosomal protein S8 ONI09_02935 PF00347 Ribosomal protein L6 ONI09_02940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ONI09_02945 PF00333 Ribosomal protein S5, N-terminal domain ONI09_02945 PF03719 Ribosomal protein S5, C-terminal domain ONI09_02950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ONI09_02955 PF00344 SecY translocase ONI09_02965 PF00416 Ribosomal protein S13/S18 ONI09_02970 PF00411 Ribosomal protein S11 ONI09_02975 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ONI09_02975 PF01000 RNA polymerase Rpb3/RpoA insert domain ONI09_02975 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ONI09_02980 PF01196 Ribosomal protein L17 ONI09_02985 PF02021 Uncharacterised protein family UPF0102 ONI09_02990 PF00213 ATP synthase delta (OSCP) subunit ONI09_02995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ONI09_02995 PF00306 ATP synthase alpha/beta chain, C terminal domain ONI09_02995 PF02874 ATP synthase alpha/beta family, beta-barrel domain ONI09_03000 PF01272 Transcription elongation factor, GreA/GreB, C-term ONI09_03000 PF03449 Transcription elongation factor, N-terminal ONI09_03005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ONI09_03005 PF00925 GTP cyclohydrolase II ONI09_03025 PF00529 HlyD membrane-fusion protein of T1SS ONI09_03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ONI09_03035 PF13276 HTH-like domain ONI09_03035 PF00665 Integrase core domain ONI09_03035 PF13333 Integrase core domain ONI09_03040 PF00665 Integrase core domain ONI09_03040 PF13333 Integrase core domain ONI09_03040 PF13276 HTH-like domain ONI09_03065 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_03085 PF01348 Type II intron maturase ONI09_03085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_03150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_03180 PF01734 Patatin-like phospholipase ONI09_03195 PF01119 DNA mismatch repair protein, C-terminal domain ONI09_03195 PF08676 MutL C terminal dimerisation domain ONI09_03255 PF01119 DNA mismatch repair protein, C-terminal domain ONI09_03255 PF08676 MutL C terminal dimerisation domain ONI09_03270 PF01734 Patatin-like phospholipase ONI09_03340 PF01548 Transposase ONI09_03340 PF02371 Transposase IS116/IS110/IS902 family ONI09_03405 PF01555 DNA methylase ONI09_03435 PF06250 YhcG PDDEXK nuclease domain ONI09_03435 PF17761 DUF1016 N-terminal domain ONI09_03485 PF12419 SNF2 Helicase protein ONI09_03485 PF00271 Helicase conserved C-terminal domain ONI09_03485 PF00176 SNF2 family N-terminal domain ONI09_03490 PF00132 Bacterial transferase hexapeptide (six repeats) ONI09_03490 PF14602 Hexapeptide repeat of succinyl-transferase ONI09_03490 PF12804 MobA-like NTP transferase domain ONI09_03495 PF16363 GDP-mannose 4,6 dehydratase ONI09_03515 PF00005 ABC transporter ONI09_03515 PF00664 ABC transporter transmembrane region ONI09_03525 PF01212 Beta-eliminating lyase ONI09_03535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ONI09_03535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ONI09_03535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ONI09_03540 PF00892 EamA-like transporter family ONI09_03560 PF12796 Ankyrin repeats (3 copies) ONI09_03570 PF00533 BRCA1 C Terminus (BRCT) domain ONI09_03570 PF01653 NAD-dependent DNA ligase adenylation domain ONI09_03570 PF12826 Helix-hairpin-helix motif ONI09_03570 PF03120 NAD-dependent DNA ligase OB-fold domain ONI09_03585 PF00533 BRCA1 C Terminus (BRCT) domain ONI09_03585 PF01653 NAD-dependent DNA ligase adenylation domain ONI09_03585 PF03120 NAD-dependent DNA ligase OB-fold domain ONI09_03585 PF12826 Helix-hairpin-helix motif ONI09_03590 PF04002 RadC-like JAB domain ONI09_03655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_03670 PF00206 Lyase ONI09_03670 PF10415 Fumarase C C-terminus ONI09_03675 PF00462 Glutaredoxin ONI09_03690 PF00390 Malic enzyme, N-terminal domain ONI09_03690 PF03949 Malic enzyme, NAD binding domain ONI09_03690 PF01515 Phosphate acetyl/butaryl transferase ONI09_03695 PF01066 CDP-alcohol phosphatidyltransferase ONI09_03705 PF13525 Outer membrane lipoprotein ONI09_03710 PF01709 Transcriptional regulator ONI09_03725 PF01551 Peptidase family M23 ONI09_03725 PF01476 LysM domain ONI09_03725 PF08525 Opacity-associated protein A N-terminal motif ONI09_03750 PF00679 Elongation factor G C-terminus ONI09_03750 PF14492 Elongation Factor G, domain II ONI09_03750 PF00009 Elongation factor Tu GTP binding domain ONI09_03750 PF03144 Elongation factor Tu domain 2 ONI09_03750 PF06421 GTP-binding protein LepA C-terminus ONI09_03760 PF02780 Transketolase, C-terminal domain ONI09_03760 PF00364 Biotin-requiring enzyme ONI09_03760 PF02779 Transketolase, pyrimidine binding domain ONI09_03765 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_03765 PF17862 AAA+ lid domain ONI09_03765 PF06480 FtsH Extracellular ONI09_03765 PF01434 Peptidase family M41 ONI09_03775 PF07690 Major Facilitator Superfamily ONI09_03775 PF00083 Sugar (and other) transporter ONI09_03795 PF14437 MafB19-like deaminase ONI09_03800 PF06418 CTP synthase N-terminus ONI09_03800 PF00117 Glutamine amidotransferase class-I ONI09_03820 PF08264 Anticodon-binding domain of tRNA ONI09_03820 PF00133 tRNA synthetases class I (I, L, M and V) ONI09_03835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ONI09_03865 PF00005 ABC transporter ONI09_03870 PF00528 Binding-protein-dependent transport system inner membrane component ONI09_03875 PF00497 Bacterial extracellular solute-binding proteins, family 3 ONI09_03880 PF01316 Arginine repressor, DNA binding domain ONI09_03880 PF02863 Arginine repressor, C-terminal domain ONI09_03885 PF00902 Sec-independent protein translocase protein (TatC) ONI09_03890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ONI09_03890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ONI09_03915 PF13735 tRNA nucleotidyltransferase domain 2 putative ONI09_03915 PF01743 Poly A polymerase head domain ONI09_03915 PF12627 Probable RNA and SrmB- binding site of polymerase A ONI09_03925 PF01926 50S ribosome-binding GTPase ONI09_03925 PF06071 Protein of unknown function (DUF933) ONI09_03945 PF00625 Guanylate kinase ONI09_03970 PF02910 Fumarate reductase flavoprotein C-term ONI09_03970 PF00890 FAD binding domain ONI09_03975 PF00749 tRNA synthetases class I (E and Q), catalytic domain ONI09_03985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ONI09_03985 PF00364 Biotin-requiring enzyme ONI09_03985 PF18140 Propionyl-coenzyme A carboxylase BT domain ONI09_03985 PF00289 Biotin carboxylase, N-terminal domain ONI09_03985 PF02785 Biotin carboxylase C-terminal domain ONI09_03990 PF02628 Cytochrome oxidase assembly protein ONI09_04015 PF00137 ATP synthase subunit C ONI09_04020 PF00119 ATP synthase A chain ONI09_04030 PF03483 B3/4 domain ONI09_04030 PF03484 tRNA synthetase B5 domain ONI09_04030 PF03147 Ferredoxin-fold anticodon binding domain ONI09_04030 PF01588 Putative tRNA binding domain ONI09_04030 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ONI09_04040 PF00133 tRNA synthetases class I (I, L, M and V) ONI09_04040 PF08264 Anticodon-binding domain of tRNA ONI09_04045 PF00854 POT family ONI09_04050 PF04055 Radical SAM superfamily ONI09_04050 PF01938 TRAM domain ONI09_04050 PF00919 Uncharacterized protein family UPF0004 ONI09_04060 PF03653 Uncharacterised protein family (UPF0093) ONI09_04065 PF00676 Dehydrogenase E1 component ONI09_04070 PF01479 S4 domain ONI09_04070 PF00849 RNA pseudouridylate synthase ONI09_04075 PF08946 Osmosensory transporter coiled coil ONI09_04075 PF00083 Sugar (and other) transporter ONI09_04080 PF00152 tRNA synthetases class II (D, K and N) ONI09_04080 PF02938 GAD domain ONI09_04080 PF01336 OB-fold nucleic acid binding domain ONI09_04090 PF00005 ABC transporter ONI09_04115 PF03485 Arginyl tRNA synthetase N terminal domain ONI09_04115 PF05746 DALR anticodon binding domain ONI09_04115 PF00750 tRNA synthetases class I (R) ONI09_04125 PF00664 ABC transporter transmembrane region ONI09_04125 PF00005 ABC transporter ONI09_04135 PF01098 Cell cycle protein ONI09_04140 PF01209 ubiE/COQ5 methyltransferase family ONI09_04145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ONI09_04145 PF04055 Radical SAM superfamily ONI09_04150 PF00830 Ribosomal L28 family ONI09_04160 PF04384 Iron-sulphur cluster assembly ONI09_04170 PF00163 Ribosomal protein S4/S9 N-terminal domain ONI09_04170 PF01479 S4 domain ONI09_04175 PF02779 Transketolase, pyrimidine binding domain ONI09_04175 PF02780 Transketolase, C-terminal domain ONI09_04175 PF00456 Transketolase, thiamine diphosphate binding domain ONI09_04200 PF07690 Major Facilitator Superfamily ONI09_04230 PF00692 dUTPase ONI09_04250 PF02386 Cation transport protein ONI09_04255 PF00571 CBS domain ONI09_04255 PF01769 Divalent cation transporter ONI09_04255 PF03448 MgtE intracellular N domain ONI09_04270 PF13333 Integrase core domain ONI09_04270 PF00665 Integrase core domain ONI09_04270 PF13276 HTH-like domain ONI09_04275 PF00665 Integrase core domain ONI09_04275 PF13276 HTH-like domain ONI09_04275 PF13333 Integrase core domain ONI09_04285 PF01527 Transposase ONI09_04290 PF00005 ABC transporter ONI09_04295 PF01113 Dihydrodipicolinate reductase, N-terminus ONI09_04295 PF05173 Dihydrodipicolinate reductase, C-terminus ONI09_04315 PF00950 ABC 3 transport family ONI09_04325 PF08544 GHMP kinases C terminal ONI09_04325 PF00288 GHMP kinases N terminal domain ONI09_04330 PF12705 PD-(D/E)XK nuclease superfamily ONI09_04330 PF00580 UvrD/REP helicase N-terminal domain ONI09_04330 PF13361 UvrD-like helicase C-terminal domain ONI09_04340 PF04002 RadC-like JAB domain ONI09_04350 PF06271 RDD family ONI09_04360 PF00772 DnaB-like helicase N terminal domain ONI09_04360 PF03796 DnaB-like helicase C terminal domain ONI09_04375 PF08264 Anticodon-binding domain of tRNA ONI09_04375 PF09334 tRNA synthetases class I (M) ONI09_04385 PF08241 Methyltransferase domain ONI09_04395 PF13662 Toprim domain ONI09_04395 PF08275 DNA primase catalytic core, N-terminal domain ONI09_04395 PF01807 CHC2 zinc finger ONI09_04400 PF02661 Fic/DOC family ONI09_04400 PF13784 Fic/DOC family N-terminal ONI09_04415 PF13276 HTH-like domain ONI09_04415 PF00665 Integrase core domain ONI09_04415 PF13333 Integrase core domain ONI09_04435 PF00444 Ribosomal protein L36 ONI09_04440 PF03618 Kinase/pyrophosphorylase ONI09_04445 PF01578 Cytochrome C assembly protein ONI09_04460 PF00709 Adenylosuccinate synthetase ONI09_04480 PF01176 Translation initiation factor 1A / IF-1 ONI09_04485 PF02545 Maf-like protein ONI09_04500 PF01235 Sodium:alanine symporter family ONI09_04530 PF01548 Transposase ONI09_04530 PF02371 Transposase IS116/IS110/IS902 family ONI09_04535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_04535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ONI09_04545 PF04101 Glycosyltransferase family 28 C-terminal domain ONI09_04545 PF03033 Glycosyltransferase family 28 N-terminal domain ONI09_04550 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ONI09_04550 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ONI09_04555 PF04972 BON domain ONI09_04565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ONI09_04565 PF05697 Bacterial trigger factor protein (TF) ONI09_04565 PF05698 Bacterial trigger factor protein (TF) C-terminus ONI09_04570 PF00574 Clp protease ONI09_04575 PF10431 C-terminal, D2-small domain, of ClpB protein ONI09_04575 PF07724 AAA domain (Cdc48 subfamily) ONI09_04575 PF06689 ClpX C4-type zinc finger ONI09_04580 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_04580 PF05362 Lon protease (S16) C-terminal proteolytic domain ONI09_04580 PF02190 ATP-dependent protease La (LON) substrate-binding domain ONI09_04595 PF00115 Cytochrome C and Quinol oxidase polypeptide I ONI09_04605 PF02272 DHHA1 domain ONI09_04605 PF17768 RecJ OB domain ONI09_04605 PF01368 DHH family ONI09_04620 PF01571 Aminomethyltransferase folate-binding domain ONI09_04625 PF00166 Chaperonin 10 Kd subunit ONI09_04630 PF00118 TCP-1/cpn60 chaperonin family ONI09_04635 PF02542 YgbB family ONI09_04635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ONI09_04640 PF00075 RNase H ONI09_04645 PF01040 UbiA prenyltransferase family ONI09_04650 PF00115 Cytochrome C and Quinol oxidase polypeptide I ONI09_04655 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ONI09_04655 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ONI09_04665 PF13333 Integrase core domain ONI09_04665 PF13276 HTH-like domain ONI09_04665 PF00665 Integrase core domain ONI09_04680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_04680 PF01348 Type II intron maturase ONI09_04695 PF13361 UvrD-like helicase C-terminal domain ONI09_04695 PF00580 UvrD/REP helicase N-terminal domain ONI09_04760 PF06250 YhcG PDDEXK nuclease domain ONI09_04760 PF17761 DUF1016 N-terminal domain ONI09_04955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ONI09_04970 PF01926 50S ribosome-binding GTPase ONI09_04970 PF01018 GTP1/OBG ONI09_04975 PF00113 Enolase, C-terminal TIM barrel domain ONI09_04975 PF03952 Enolase, N-terminal domain ONI09_04980 PF01225 Mur ligase family, catalytic domain ONI09_04980 PF02875 Mur ligase family, glutamate ligase domain ONI09_04980 PF08245 Mur ligase middle domain ONI09_04985 PF03330 Lytic transglycolase ONI09_05005 PF04055 Radical SAM superfamily ONI09_05005 PF00919 Uncharacterized protein family UPF0004 ONI09_05010 PF01425 Amidase ONI09_05025 PF13276 HTH-like domain ONI09_05025 PF00665 Integrase core domain ONI09_05025 PF13333 Integrase core domain ONI09_05030 PF00665 Integrase core domain ONI09_05030 PF13276 HTH-like domain ONI09_05030 PF13333 Integrase core domain ONI09_05050 PF01467 Cytidylyltransferase-like ONI09_05065 PF01255 Putative undecaprenyl diphosphate synthase ONI09_05075 PF01765 Ribosome recycling factor ONI09_05080 PF00696 Amino acid kinase family ONI09_05085 PF00889 Elongation factor TS ONI09_05090 PF00318 Ribosomal protein S2 ONI09_05100 PF02699 Preprotein translocase subunit ONI09_05105 PF01380 SIS domain ONI09_05120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ONI09_05120 PF01565 FAD binding domain ONI09_05125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ONI09_05125 PF03900 Porphobilinogen deaminase, C-terminal domain ONI09_05135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ONI09_05135 PF02817 e3 binding domain ONI09_05135 PF00364 Biotin-requiring enzyme ONI09_05155 PF07517 SecA DEAD-like domain ONI09_05155 PF01043 SecA preprotein cross-linking domain ONI09_05155 PF07516 SecA Wing and Scaffold domain ONI09_05155 PF02810 SEC-C motif ONI09_05165 PF00923 Transaldolase/Fructose-6-phosphate aldolase ONI09_05185 PF13276 HTH-like domain ONI09_05185 PF00665 Integrase core domain ONI09_05185 PF13333 Integrase core domain ONI09_05195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ONI09_05195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ONI09_05200 PF02441 Flavoprotein ONI09_05205 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) ONI09_05210 PF01595 Cyclin M transmembrane N-terminal domain ONI09_05210 PF00571 CBS domain ONI09_05210 PF03471 Transporter associated domain ONI09_05215 PF00202 Aminotransferase class-III ONI09_05220 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ONI09_05240 PF02646 RmuC family ONI09_05270 PF07690 Major Facilitator Superfamily ONI09_05280 PF03462 PCRF domain ONI09_05280 PF00472 RF-1 domain ONI09_05285 PF01926 50S ribosome-binding GTPase ONI09_05290 PF00696 Amino acid kinase family ONI09_05295 PF00692 dUTPase ONI09_05315 PF01029 NusB family ONI09_05320 PF00885 6,7-dimethyl-8-ribityllumazine synthase ONI09_05325 PF02096 60Kd inner membrane protein ONI09_05325 PF14849 YidC periplasmic domain ONI09_05335 PF07549 SecD/SecF GG Motif ONI09_05335 PF02355 Protein export membrane protein ONI09_05355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ONI09_05355 PF01578 Cytochrome C assembly protein ONI09_05370 PF01979 Amidohydrolase family ONI09_05375 PF00375 Sodium:dicarboxylate symporter family ONI09_05380 PF00156 Phosphoribosyl transferase domain ONI09_05385 PF00009 Elongation factor Tu GTP binding domain ONI09_05385 PF03144 Elongation factor Tu domain 2 ONI09_05385 PF00679 Elongation factor G C-terminus ONI09_05400 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_05400 PF07724 AAA domain (Cdc48 subfamily) ONI09_05400 PF17871 AAA lid domain ONI09_05400 PF10431 C-terminal, D2-small domain, of ClpB protein ONI09_05400 PF02861 Clp amino terminal domain, pathogenicity island component ONI09_05405 PF05088 Bacterial NAD-glutamate dehydrogenase ONI09_05415 PF00072 Response regulator receiver domain ONI09_05415 PF00990 Diguanylate cyclase, GGDEF domain ONI09_05420 PF02565 Recombination protein O C terminal ONI09_05420 PF11967 Recombination protein O N terminal ONI09_05425 PF06250 YhcG PDDEXK nuclease domain ONI09_05425 PF17761 DUF1016 N-terminal domain ONI09_05440 PF00268 Ribonucleotide reductase, small chain ONI09_05450 PF00814 Glycoprotease family ONI09_05460 PF00596 Class II Aldolase and Adducin N-terminal domain ONI09_05480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ONI09_05485 PF02874 ATP synthase alpha/beta family, beta-barrel domain ONI09_05485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ONI09_05490 PF00528 Binding-protein-dependent transport system inner membrane component ONI09_05495 PF00468 Ribosomal protein L34 ONI09_05520 PF01209 ubiE/COQ5 methyltransferase family ONI09_05525 PF03477 ATP cone domain ONI09_05525 PF02867 Ribonucleotide reductase, barrel domain ONI09_05525 PF00317 Ribonucleotide reductase, all-alpha domain ONI09_05530 PF02540 NAD synthase ONI09_05530 PF00958 GMP synthase C terminal domain ONI09_05530 PF00117 Glutamine amidotransferase class-I ONI09_05535 PF00571 CBS domain ONI09_05535 PF03471 Transporter associated domain ONI09_05535 PF03741 Integral membrane protein TerC family ONI09_05550 PF00488 MutS domain V ONI09_05550 PF05192 MutS domain III ONI09_05550 PF01624 MutS domain I ONI09_05550 PF05188 MutS domain II ONI09_05550 PF05190 MutS family domain IV ONI09_05555 PF01612 3'-5' exonuclease ONI09_05555 PF00570 HRDC domain ONI09_05560 PF01121 Dephospho-CoA kinase ONI09_05580 PF00665 Integrase core domain ONI09_05580 PF13333 Integrase core domain ONI09_05580 PF13276 HTH-like domain ONI09_05610 PF02355 Protein export membrane protein ONI09_05630 PF00571 CBS domain ONI09_05630 PF00478 IMP dehydrogenase / GMP reductase domain ONI09_05635 PF00398 Ribosomal RNA adenine dimethylase ONI09_05645 PF00121 Triosephosphate isomerase ONI09_05650 PF17782 DprA winged helix domain ONI09_05650 PF02481 DNA recombination-mediator protein A ONI09_05655 PF11953 Domain of unknown function (DUF3470) ONI09_05655 PF00037 4Fe-4S binding domain ONI09_05665 PF01820 D-ala D-ala ligase N-terminus ONI09_05665 PF07478 D-ala D-ala ligase C-terminus ONI09_05670 PF08478 POTRA domain, FtsQ-type ONI09_05670 PF03799 Cell division protein FtsQ ONI09_05675 PF07943 Penicillin-binding protein 5, C-terminal domain ONI09_05675 PF00768 D-alanyl-D-alanine carboxypeptidase ONI09_05680 PF00893 Small Multidrug Resistance protein ONI09_05685 PF00893 Small Multidrug Resistance protein ONI09_05700 PF00694 Aconitase C-terminal domain ONI09_05700 PF00330 Aconitase family (aconitate hydratase) ONI09_05705 PF02556 Preprotein translocase subunit SecB ONI09_05715 PF00929 Exonuclease ONI09_05720 PF02630 SCO1/SenC ONI09_05740 PF01751 Toprim domain ONI09_05740 PF00986 DNA gyrase B subunit, carboxyl terminus ONI09_05740 PF00204 DNA gyrase B ONI09_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ONI09_05755 PF04551 GcpE protein ONI09_05775 PF17854 FtsK alpha domain ONI09_05775 PF01580 FtsK/SpoIIIE family ONI09_05775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ONI09_05775 PF09397 Ftsk gamma domain ONI09_05780 PF02325 YGGT family ONI09_05820 PF00677 Lumazine binding domain ONI09_05830 PF01409 tRNA synthetases class II core domain (F) ONI09_05830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ONI09_05835 PF12804 MobA-like NTP transferase domain ONI09_05835 PF14602 Hexapeptide repeat of succinyl-transferase ONI09_05835 PF00132 Bacterial transferase hexapeptide (six repeats) ONI09_05840 PF00829 Ribosomal prokaryotic L21 protein ONI09_05845 PF01016 Ribosomal L27 protein ONI09_05855 PF02773 S-adenosylmethionine synthetase, C-terminal domain ONI09_05855 PF02772 S-adenosylmethionine synthetase, central domain ONI09_05855 PF00438 S-adenosylmethionine synthetase, N-terminal domain ONI09_05860 PF03070 TENA/THI-4/PQQC family ONI09_05870 PF00510 Cytochrome c oxidase subunit III ONI09_05875 PF02075 Crossover junction endodeoxyribonuclease RuvC ONI09_05880 PF03652 Holliday junction resolvase ONI09_05890 PF02637 GatB domain ONI09_05890 PF02934 GatB/GatE catalytic domain ONI09_05910 PF01406 tRNA synthetases class I (C) catalytic domain ONI09_05910 PF09190 DALR domain ONI09_05915 PF06055 Exopolysaccharide synthesis, ExoD ONI09_05925 PF02416 mttA/Hcf106 family ONI09_05930 PF00005 ABC transporter ONI09_05930 PF08402 TOBE domain ONI09_05940 PF08459 UvrC Helix-hairpin-helix N-terminal ONI09_05940 PF02151 UvrB/uvrC motif ONI09_05940 PF01541 GIY-YIG catalytic domain ONI09_05945 PF02092 Glycyl-tRNA synthetase beta subunit ONI09_05945 PF05746 DALR anticodon binding domain ONI09_05950 PF02091 Glycyl-tRNA synthetase alpha subunit ONI09_05960 PF00490 Delta-aminolevulinic acid dehydratase ONI09_05965 PF00146 NADH dehydrogenase ONI09_05970 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ONI09_05970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ONI09_05970 PF00384 Molybdopterin oxidoreductase ONI09_05985 PF03167 Uracil DNA glycosylase superfamily ONI09_05990 PF01327 Polypeptide deformylase ONI09_05995 PF02491 SHS2 domain inserted in FTSA ONI09_06000 PF00557 Metallopeptidase family M24 ONI09_06005 PF00083 Sugar (and other) transporter ONI09_06005 PF07690 Major Facilitator Superfamily ONI09_06010 PF01795 MraW methylase family ONI09_06025 PF01386 Ribosomal L25p family ONI09_06025 PF14693 Ribosomal protein TL5, C-terminal domain ONI09_06030 PF01195 Peptidyl-tRNA hydrolase ONI09_06045 PF01494 FAD binding domain ONI09_06055 PF10609 NUBPL iron-transfer P-loop NTPase ONI09_06070 PF01527 Transposase ONI09_06080 PF13333 Integrase core domain ONI09_06080 PF00665 Integrase core domain ONI09_06080 PF13276 HTH-like domain ONI09_06085 PF13333 Integrase core domain ONI09_06085 PF00665 Integrase core domain ONI09_06085 PF13276 HTH-like domain ONI09_06130 PF01509 TruB family pseudouridylate synthase (N terminal domain) ONI09_06130 PF16198 tRNA pseudouridylate synthase B C-terminal domain ONI09_06135 PF00312 Ribosomal protein S15 ONI09_06140 PF00575 S1 RNA binding domain ONI09_06140 PF00013 KH domain ONI09_06140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ONI09_06140 PF01138 3' exoribonuclease family, domain 1 ONI09_06140 PF03725 3' exoribonuclease family, domain 2 ONI09_06170 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ONI09_06170 PF00586 AIR synthase related protein, N-terminal domain ONI09_06170 PF02769 AIR synthase related protein, C-terminal domain ONI09_06185 PF17755 UvrA DNA-binding domain ONI09_06185 PF17760 UvrA interaction domain ONI09_06220 PF02632 BioY family ONI09_06225 PF00881 Nitroreductase family ONI09_06230 PF01678 Diaminopimelate epimerase ONI09_06235 PF00549 CoA-ligase ONI09_06235 PF02629 CoA binding domain ONI09_06240 PF08442 ATP-grasp domain ONI09_06240 PF00549 CoA-ligase ONI09_06255 PF04452 RNA methyltransferase ONI09_06275 PF01218 Coproporphyrinogen III oxidase ONI09_06280 PF13188 PAS domain ONI09_06280 PF00072 Response regulator receiver domain ONI09_06280 PF00512 His Kinase A (phospho-acceptor) domain ONI09_06280 PF08448 PAS fold ONI09_06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ONI09_06285 PF13614 AAA domain ONI09_06290 PF17762 HTH domain found in ParB protein ONI09_06290 PF02195 ParB-like nuclease domain ONI09_06305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ONI09_06310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ONI09_06320 PF01050 Mannose-6-phosphate isomerase ONI09_06320 PF00483 Nucleotidyl transferase ONI09_06330 PF02687 FtsX-like permease family ONI09_06330 PF12704 MacB-like periplasmic core domain ONI09_06345 PF00231 ATP synthase ONI09_06350 PF01523 Putative modulator of DNA gyrase ONI09_06355 PF00313 'Cold-shock' DNA-binding domain ONI09_06360 PF00271 Helicase conserved C-terminal domain ONI09_06360 PF00270 DEAD/DEAH box helicase ONI09_06365 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_06365 PF02861 Clp amino terminal domain, pathogenicity island component ONI09_06365 PF17871 AAA lid domain ONI09_06365 PF10431 C-terminal, D2-small domain, of ClpB protein ONI09_06365 PF07724 AAA domain (Cdc48 subfamily) ONI09_06375 PF01791 DeoC/LacD family aldolase ONI09_06385 PF01180 Dihydroorotate dehydrogenase ONI09_06390 PF00035 Double-stranded RNA binding motif ONI09_06390 PF14622 Ribonuclease-III-like ONI09_06405 PF13091 PLD-like domain ONI09_06435 PF00210 Ferritin-like domain ONI09_06440 PF02104 SURF1 family ONI09_06445 PF00999 Sodium/hydrogen exchanger family ONI09_06445 PF02254 TrkA-N domain ONI09_06455 PF02223 Thymidylate kinase ONI09_06465 PF00004 ATPase family associated with various cellular activities (AAA) ONI09_06465 PF17862 AAA+ lid domain ONI09_06465 PF06480 FtsH Extracellular ONI09_06465 PF01434 Peptidase family M41 ONI09_06470 PF01171 PP-loop family ONI09_06475 PF00691 OmpA family ONI09_06500 PF00719 Inorganic pyrophosphatase ONI09_06510 PF00639 PPIC-type PPIASE domain ONI09_06510 PF09312 SurA N-terminal domain ONI09_06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase ONI09_06540 PF03717 Penicillin-binding Protein dimerisation domain ONI09_06540 PF00905 Penicillin binding protein transpeptidase domain ONI09_06545 PF02401 LytB protein ONI09_06560 PF00183 Hsp90 protein ONI09_06575 PF00155 Aminotransferase class I and II ONI09_06585 PF09285 Elongation factor P, C-terminal ONI09_06585 PF01132 Elongation factor P (EF-P) OB domain ONI09_06585 PF08207 Elongation factor P (EF-P) KOW-like domain ONI09_06590 PF05239 PRC-barrel domain ONI09_06590 PF01782 RimM N-terminal domain ONI09_06595 PF00202 Aminotransferase class-III ONI09_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ONI09_06600 PF00512 His Kinase A (phospho-acceptor) domain ONI09_06600 PF00989 PAS fold ONI09_06605 PF00578 AhpC/TSA family ONI09_06610 PF02463 RecF/RecN/SMC N terminal domain ONI09_06630 PF03631 Virulence factor BrkB ONI09_06645 PF02142 MGS-like domain ONI09_06645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ONI09_06645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ONI09_06675 PF04542 Sigma-70 region 2 ONI09_06675 PF04545 Sigma-70, region 4 ONI09_06675 PF04546 Sigma-70, non-essential region ONI09_06675 PF03979 Sigma-70 factor, region 1.1 ONI09_06675 PF00140 Sigma-70 factor, region 1.2 ONI09_06675 PF04539 Sigma-70 region 3 ONI09_06680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ONI09_06690 PF00361 Proton-conducting membrane transporter ONI09_06690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ONI09_06690 PF13244 Domain of unknown function (DUF4040) ONI09_06695 PF03334 Na+/H+ antiporter subunit ONI09_06705 PF01192 RNA polymerase Rpb6 ONI09_06715 PF00731 AIR carboxylase ONI09_06720 PF08676 MutL C terminal dimerisation domain ONI09_06720 PF01119 DNA mismatch repair protein, C-terminal domain ONI09_06725 PF16078 2-oxoglutarate dehydrogenase N-terminus ONI09_06725 PF00676 Dehydrogenase E1 component ONI09_06725 PF16870 2-oxoglutarate dehydrogenase C-terminal ONI09_06725 PF02779 Transketolase, pyrimidine binding domain ONI09_06755 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ONI09_06765 PF01040 UbiA prenyltransferase family ONI09_06770 PF02033 Ribosome-binding factor A ONI09_06775 PF00009 Elongation factor Tu GTP binding domain ONI09_06775 PF11987 Translation-initiation factor 2 ONI09_06775 PF04760 Translation initiation factor IF-2, N-terminal region ONI09_06780 PF13184 NusA-like KH domain ONI09_06780 PF08529 NusA N-terminal domain ONI09_06780 PF00575 S1 RNA binding domain ONI09_06785 PF00873 AcrB/AcrD/AcrF family ONI09_06795 PF00120 Glutamine synthetase, catalytic domain