locus-tag class description wNo_00010 PF11638 DnaA N-terminal domain wNo_00010 PF08299 Bacterial dnaA protein helix-turn-helix wNo_00010 PF00308 Bacterial dnaA protein wNo_00020 PF02355 Protein export membrane protein wNo_00020 PF07549 SecD/SecF GG Motif wNo_00040 PF14849 YidC periplasmic domain wNo_00040 PF02096 60Kd inner membrane protein wNo_00050 PF00885 6,7-dimethyl-8-ribityllumazine synthase wNo_00060 PF01029 NusB family wNo_00080 PF00692 dUTPase wNo_00140 PF01648 4'-phosphopantetheinyl transferase superfamily wNo_00150 PF03129 Anticodon binding domain wNo_00150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wNo_00180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase wNo_00180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain wNo_00180 PF13288 DXP reductoisomerase C-terminal domain wNo_00200 PF00005 ABC transporter wNo_00210 PF01113 Dihydrodipicolinate reductase, N-terminus wNo_00210 PF05173 Dihydrodipicolinate reductase, C-terminus wNo_00250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family wNo_00290 PF00133 tRNA synthetases class I (I, L, M and V) wNo_00290 PF08264 Anticodon-binding domain of tRNA wNo_00310 PF00115 Cytochrome C and Quinol oxidase polypeptide I wNo_00330 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_00330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain wNo_00340 PF02899 Phage integrase, N-terminal SAM-like domain wNo_00340 PF00589 Phage integrase family wNo_00350 PF02637 GatB domain wNo_00350 PF02934 GatB/GatE catalytic domain wNo_00360 PF00676 Dehydrogenase E1 component wNo_00380 PF00529 HlyD membrane-fusion protein of T1SS wNo_00380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion wNo_00390 PF00116 Cytochrome C oxidase subunit II, periplasmic domain wNo_00390 PF02790 Cytochrome C oxidase subunit II, transmembrane domain wNo_00400 PF00115 Cytochrome C and Quinol oxidase polypeptide I wNo_00410 PF01040 UbiA prenyltransferase family wNo_00420 PF00075 RNase H wNo_00450 PF01406 tRNA synthetases class I (C) catalytic domain wNo_00450 PF09190 DALR domain wNo_00460 PF06055 Exopolysaccharide synthesis, ExoD wNo_00470 PF02416 mttA/Hcf106 family wNo_00480 PF00005 ABC transporter wNo_00500 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded wNo_00520 PF01926 50S ribosome-binding GTPase wNo_00520 PF06071 Protein of unknown function (DUF933) wNo_00610 PF03330 Lytic transglycolase wNo_00620 PF08245 Mur ligase middle domain wNo_00620 PF02875 Mur ligase family, glutamate ligase domain wNo_00620 PF01225 Mur ligase family, catalytic domain wNo_00630 PF07690 Major Facilitator Superfamily wNo_00640 PF01494 FAD binding domain wNo_00680 PF00709 Adenylosuccinate synthetase wNo_00710 PF01176 Translation initiation factor 1A / IF-1 wNo_00720 PF02545 Maf-like protein wNo_00740 PF01235 Sodium:alanine symporter family wNo_00760 PF00118 TCP-1/cpn60 chaperonin family wNo_00770 PF00166 Chaperonin 10 Kd subunit wNo_00780 PF01571 Aminomethyltransferase folate-binding domain wNo_00820 PF00268 Ribonucleotide reductase, small chain wNo_00850 PF02565 Recombination protein O C terminal wNo_00850 PF11967 Recombination protein O N terminal wNo_00860 PF00990 Diguanylate cyclase, GGDEF domain wNo_00860 PF00072 Response regulator receiver domain wNo_00880 PF05088 Bacterial NAD-glutamate dehydrogenase wNo_00890 PF07724 AAA domain (Cdc48 subfamily) wNo_00890 PF02861 Clp amino terminal domain, pathogenicity island component wNo_00890 PF10431 C-terminal, D2-small domain, of ClpB protein wNo_00890 PF00004 ATPase family associated with various cellular activities (AAA) wNo_00890 PF17871 AAA lid domain wNo_00930 PF02817 e3 binding domain wNo_00930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) wNo_00930 PF00364 Biotin-requiring enzyme wNo_00950 PF01255 Putative undecaprenyl diphosphate synthase wNo_00980 PF01467 Cytidylyltransferase-like wNo_01060 PF02796 Helix-turn-helix domain of resolvase wNo_01060 PF00239 Resolvase, N terminal domain wNo_01080 PF12796 Ankyrin repeats (3 copies) wNo_01410 PF00156 Phosphoribosyl transferase domain wNo_01420 PF00375 Sodium:dicarboxylate symporter family wNo_01440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain wNo_01440 PF01565 FAD binding domain wNo_01450 PF03900 Porphobilinogen deaminase, C-terminal domain wNo_01450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain wNo_01460 PF02355 Protein export membrane protein wNo_01500 PF04055 Radical SAM superfamily wNo_01500 PF00919 Uncharacterized protein family UPF0004 wNo_01520 PF00271 Helicase conserved C-terminal domain wNo_01520 PF00270 DEAD/DEAH box helicase wNo_01520 PF17191 RecG wedge domain wNo_01530 PF00444 Ribosomal protein L36 wNo_01540 PF03618 Kinase/pyrophosphorylase wNo_01550 PF01578 Cytochrome C assembly protein wNo_01570 PF03958 Bacterial type II/III secretion system short domain wNo_01570 PF00263 Bacterial type II and III secretion system protein wNo_01580 PF00958 GMP synthase C terminal domain wNo_01580 PF00117 Glutamine amidotransferase class-I wNo_01580 PF02540 NAD synthase wNo_01590 PF03471 Transporter associated domain wNo_01590 PF03741 Integral membrane protein TerC family wNo_01620 PF14492 Elongation Factor G, domain II wNo_01620 PF03144 Elongation factor Tu domain 2 wNo_01620 PF06421 GTP-binding protein LepA C-terminus wNo_01620 PF00009 Elongation factor Tu GTP binding domain wNo_01620 PF00679 Elongation factor G C-terminus wNo_01640 PF00462 Glutaredoxin wNo_01650 PF01687 Riboflavin kinase wNo_01650 PF06574 FAD synthetase wNo_01660 PF01252 Signal peptidase (SPase) II wNo_01670 PF00675 Insulinase (Peptidase family M16) wNo_01670 PF05193 Peptidase M16 inactive domain wNo_01700 PF00551 Formyl transferase wNo_01740 PF01668 SmpB protein wNo_01750 PF01790 Prolipoprotein diacylglyceryl transferase wNo_01770 PF13091 PLD-like domain wNo_01780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase wNo_01850 PF16870 2-oxoglutarate dehydrogenase C-terminal wNo_01850 PF16078 2-oxoglutarate dehydrogenase N-terminus wNo_01850 PF00676 Dehydrogenase E1 component wNo_01850 PF02779 Transketolase, pyrimidine binding domain wNo_01870 PF00579 tRNA synthetases class I (W and Y) wNo_01880 PF01025 GrpE wNo_01890 PF00348 Polyprenyl synthetase wNo_01900 PF00886 Ribosomal protein S16 wNo_01940 PF07497 Rho termination factor, RNA-binding domain wNo_01940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wNo_01940 PF07498 Rho termination factor, N-terminal domain wNo_01950 PF00478 IMP dehydrogenase / GMP reductase domain wNo_01950 PF00571 CBS domain wNo_01960 PF00398 Ribosomal RNA adenine dimethylase wNo_01970 PF00121 Triosephosphate isomerase wNo_02000 PF00892 EamA-like transporter family wNo_02010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain wNo_02010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain wNo_02010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain wNo_02030 PF01212 Beta-eliminating lyase wNo_02040 PF01212 Beta-eliminating lyase wNo_02050 PF00664 ABC transporter transmembrane region wNo_02050 PF00005 ABC transporter wNo_02090 PF01370 NAD dependent epimerase/dehydratase family wNo_02100 PF14602 Hexapeptide repeat of succinyl-transferase wNo_02100 PF12804 MobA-like NTP transferase domain wNo_02100 PF00132 Bacterial transferase hexapeptide (six repeats) wNo_02120 PF01348 Type II intron maturase wNo_02120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_02130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_02150 PF01119 DNA mismatch repair protein, C-terminal domain wNo_02150 PF08676 MutL C terminal dimerisation domain wNo_02170 PF04002 RadC-like JAB domain wNo_02210 PF08245 Mur ligase middle domain wNo_02270 PF00132 Bacterial transferase hexapeptide (six repeats) wNo_02270 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal wNo_02270 PF14602 Hexapeptide repeat of succinyl-transferase wNo_02290 PF00890 FAD binding domain wNo_02290 PF02910 Fumarate reductase flavoprotein C-term wNo_02310 PF00625 Guanylate kinase wNo_02340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain wNo_02340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain wNo_02350 PF13416 Bacterial extracellular solute-binding protein wNo_02370 PF01513 ATP-NAD kinase wNo_02380 PF01197 Ribosomal protein L31 wNo_02390 PF00698 Acyl transferase domain wNo_02400 PF01676 Metalloenzyme superfamily wNo_02400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) wNo_02420 PF01411 tRNA synthetases class II (A) wNo_02420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain wNo_02420 PF02272 DHHA1 domain wNo_02460 PF01632 Ribosomal protein L35 wNo_02470 PF00453 Ribosomal protein L20 wNo_02480 PF02911 Formyl transferase, C-terminal domain wNo_02480 PF00551 Formyl transferase wNo_02490 PF01808 AICARFT/IMPCHase bienzyme wNo_02490 PF02142 MGS-like domain wNo_02500 PF00730 HhH-GPD superfamily base excision DNA repair protein wNo_02500 PF00633 Helix-hairpin-helix motif wNo_02500 PF10576 Iron-sulfur binding domain of endonuclease III wNo_02520 PF00180 Isocitrate/isopropylmalate dehydrogenase wNo_02520 PF18324 Hypothetical protein TT1725 wNo_02540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain wNo_02540 PF02844 Phosphoribosylglycinamide synthetase, N domain wNo_02540 PF02843 Phosphoribosylglycinamide synthetase, C domain wNo_02550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wNo_02550 PF02403 Seryl-tRNA synthetase N-terminal domain wNo_02570 PF01207 Dihydrouridine synthase (Dus) wNo_02580 PF04997 RNA polymerase Rpb1, domain 1 wNo_02580 PF00623 RNA polymerase Rpb1, domain 2 wNo_02580 PF04565 RNA polymerase Rpb2, domain 3 wNo_02580 PF10385 RNA polymerase beta subunit external 1 domain wNo_02580 PF00562 RNA polymerase Rpb2, domain 6 wNo_02580 PF04561 RNA polymerase Rpb2, domain 2 wNo_02580 PF04563 RNA polymerase beta subunit wNo_02580 PF04998 RNA polymerase Rpb1, domain 5 wNo_02580 PF04560 RNA polymerase Rpb2, domain 7 wNo_02580 PF05000 RNA polymerase Rpb1, domain 4 wNo_02580 PF04983 RNA polymerase Rpb1, domain 3 wNo_02600 PF00466 Ribosomal protein L10 wNo_02610 PF00687 Ribosomal protein L1p/L10e family wNo_02620 PF00298 Ribosomal protein L11, RNA binding domain wNo_02620 PF03946 Ribosomal protein L11, N-terminal domain wNo_02630 PF02357 Transcription termination factor nusG wNo_02630 PF00467 KOW motif wNo_02640 PF00009 Elongation factor Tu GTP binding domain wNo_02640 PF03144 Elongation factor Tu domain 2 wNo_02640 PF03143 Elongation factor Tu C-terminal domain wNo_02650 PF00679 Elongation factor G C-terminus wNo_02650 PF14492 Elongation Factor G, domain II wNo_02650 PF03144 Elongation factor Tu domain 2 wNo_02650 PF00009 Elongation factor Tu GTP binding domain wNo_02650 PF03764 Elongation factor G, domain IV wNo_02660 PF00177 Ribosomal protein S7p/S5e wNo_02670 PF00164 Ribosomal protein S12/S23 wNo_02680 PF02390 Putative methyltransferase wNo_02680 PF17827 PrmC N-terminal domain wNo_02680 PF05175 Methyltransferase small domain wNo_02700 PF04972 BON domain wNo_02710 PF05698 Bacterial trigger factor protein (TF) C-terminus wNo_02710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase wNo_02710 PF05697 Bacterial trigger factor protein (TF) wNo_02720 PF00574 Clp protease wNo_02730 PF07724 AAA domain (Cdc48 subfamily) wNo_02730 PF10431 C-terminal, D2-small domain, of ClpB protein wNo_02730 PF06689 ClpX C4-type zinc finger wNo_02740 PF05362 Lon protease (S16) C-terminal proteolytic domain wNo_02740 PF00004 ATPase family associated with various cellular activities (AAA) wNo_02740 PF02190 ATP-dependent protease La (LON) substrate-binding domain wNo_02750 PF03717 Penicillin-binding Protein dimerisation domain wNo_02750 PF00905 Penicillin binding protein transpeptidase domain wNo_02760 PF01522 Polysaccharide deacetylase wNo_02770 PF13335 Magnesium chelatase, subunit ChlI C-terminal wNo_02770 PF01078 Magnesium chelatase, subunit ChlI wNo_02790 PF00091 Tubulin/FtsZ family, GTPase domain wNo_02790 PF12327 FtsZ family, C-terminal domain wNo_02810 PF02130 Uncharacterized protein family UPF0054 wNo_02820 PF13085 2Fe-2S iron-sulfur cluster binding domain wNo_02850 PF04608 Phosphatidylglycerophosphatase A wNo_02860 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus wNo_02860 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus wNo_02870 PF00072 Response regulator receiver domain wNo_02870 PF00486 Transcriptional regulatory protein, C terminal wNo_02900 PF01702 Queuine tRNA-ribosyltransferase wNo_02920 PF05193 Peptidase M16 inactive domain wNo_02920 PF00675 Insulinase (Peptidase family M16) wNo_02930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain wNo_02930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain wNo_02960 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wNo_02970 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wNo_02980 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wNo_02990 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wNo_03000 PF03135 CagE, TrbE, VirB family, component of type IV transporter system wNo_03020 PF01921 tRNA synthetases class I (K) wNo_03040 PF01728 FtsJ-like methyltransferase wNo_03050 PF10691 Protein of unknown function (DUF2497) wNo_03070 PF00572 Ribosomal protein L13 wNo_03080 PF00380 Ribosomal protein S9/S16 wNo_03100 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ wNo_03120 PF00749 tRNA synthetases class I (E and Q), catalytic domain wNo_03140 PF02785 Biotin carboxylase C-terminal domain wNo_03140 PF00289 Biotin carboxylase, N-terminal domain wNo_03140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain wNo_03150 PF02628 Cytochrome oxidase assembly protein wNo_03190 PF00137 ATP synthase subunit C wNo_03200 PF00119 ATP synthase A chain wNo_03220 PF03484 tRNA synthetase B5 domain wNo_03220 PF03147 Ferredoxin-fold anticodon binding domain wNo_03220 PF01588 Putative tRNA binding domain wNo_03220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain wNo_03220 PF03483 B3/4 domain wNo_03240 PF00133 tRNA synthetases class I (I, L, M and V) wNo_03240 PF08264 Anticodon-binding domain of tRNA wNo_03250 PF04055 Radical SAM superfamily wNo_03250 PF01938 TRAM domain wNo_03250 PF00919 Uncharacterized protein family UPF0004 wNo_03260 PF01368 DHH family wNo_03260 PF02272 DHHA1 domain wNo_03260 PF17768 RecJ OB domain wNo_03270 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit wNo_03290 PF03060 Nitronate monooxygenase wNo_03320 PF03135 CagE, TrbE, VirB family, component of type IV transporter system wNo_03380 PF01321 Creatinase/Prolidase N-terminal domain wNo_03380 PF00557 Metallopeptidase family M24 wNo_03390 PF01134 Glucose inhibited division protein A wNo_03390 PF13932 GidA associated domain wNo_03410 PF03023 Lipid II flippase MurJ wNo_03470 PF03099 Biotin/lipoate A/B protein ligase family wNo_03480 PF02016 LD-carboxypeptidase N-terminal domain wNo_03480 PF17676 LD-carboxypeptidase C-terminal domain wNo_03500 PF02811 PHP domain wNo_03500 PF07733 Bacterial DNA polymerase III alpha NTPase domain wNo_03500 PF14579 Helix-hairpin-helix motif wNo_03500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain wNo_03510 PF01250 Ribosomal protein S6 wNo_03520 PF01084 Ribosomal protein S18 wNo_03530 PF03948 Ribosomal protein L9, C-terminal domain wNo_03530 PF01281 Ribosomal protein L9, N-terminal domain wNo_03540 PF00206 Lyase wNo_03540 PF10397 Adenylosuccinate lyase C-terminus wNo_03550 PF13685 Iron-containing alcohol dehydrogenase wNo_03560 PF07687 Peptidase dimerisation domain wNo_03560 PF01546 Peptidase family M20/M25/M40 wNo_03600 PF00186 Dihydrofolate reductase wNo_03610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) wNo_03610 PF00809 Pterin binding enzyme wNo_03620 PF02152 Dihydroneopterin aldolase wNo_03630 PF03070 TENA/THI-4/PQQC family wNo_03660 PF00085 Thioredoxin wNo_03690 PF01926 50S ribosome-binding GTPase wNo_03690 PF07650 KH domain wNo_03800 PF00528 Binding-protein-dependent transport system inner membrane component wNo_03810 PF04379 ApaG domain wNo_03820 PF02222 ATP-grasp domain wNo_03820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain wNo_03830 PF02774 Semialdehyde dehydrogenase, dimerisation domain wNo_03830 PF01118 Semialdehyde dehydrogenase, NAD binding domain wNo_03860 PF13520 Amino acid permease wNo_03880 PF01975 Survival protein SurE wNo_03890 PF13393 Histidyl-tRNA synthetase wNo_03890 PF03129 Anticodon binding domain wNo_03910 PF00226 DnaJ domain wNo_03910 PF00684 DnaJ central domain wNo_03910 PF01556 DnaJ C terminal domain wNo_03950 PF00032 Cytochrome b(C-terminal)/b6/petD wNo_03950 PF00033 Cytochrome b/b6/petB wNo_03960 PF00033 Cytochrome b/b6/petB wNo_03960 PF02167 Cytochrome C1 family wNo_03960 PF00032 Cytochrome b(C-terminal)/b6/petD wNo_03970 PF17757 UvrB interaction domain wNo_03970 PF12344 Ultra-violet resistance protein B wNo_03970 PF02151 UvrB/uvrC motif wNo_03970 PF04851 Type III restriction enzyme, res subunit wNo_03970 PF00271 Helicase conserved C-terminal domain wNo_03990 PF00216 Bacterial DNA-binding protein wNo_04000 PF13411 MerR HTH family regulatory protein wNo_04010 PF01551 Peptidase family M23 wNo_04020 PF08264 Anticodon-binding domain of tRNA wNo_04020 PF00133 tRNA synthetases class I (I, L, M and V) wNo_04020 PF09334 tRNA synthetases class I (M) wNo_04020 PF13603 Leucyl-tRNA synthetase, Domain 2 wNo_04040 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain wNo_04040 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain wNo_04050 PF02441 Flavoprotein wNo_04060 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) wNo_04070 PF00571 CBS domain wNo_04070 PF01595 Cyclin M transmembrane N-terminal domain wNo_04070 PF03471 Transporter associated domain wNo_04080 PF00202 Aminotransferase class-III wNo_04090 PF00334 Nucleoside diphosphate kinase wNo_04120 PF00762 Ferrochelatase wNo_04150 PF00227 Proteasome subunit wNo_04160 PF07724 AAA domain (Cdc48 subfamily) wNo_04160 PF10431 C-terminal, D2-small domain, of ClpB protein wNo_04160 PF00004 ATPase family associated with various cellular activities (AAA) wNo_04180 PF00348 Polyprenyl synthetase wNo_04190 PF00550 Phosphopantetheine attachment site wNo_04200 PF00109 Beta-ketoacyl synthase, N-terminal domain wNo_04200 PF02801 Beta-ketoacyl synthase, C-terminal domain wNo_04210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) wNo_04220 PF02511 Thymidylate synthase complementing protein wNo_04260 PF18074 Primosomal protein N C-terminal domain wNo_04260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain wNo_04260 PF17764 3′ DNA-binding domain (3′BD) wNo_04260 PF00270 DEAD/DEAH box helicase wNo_04290 PF02132 RecR protein wNo_04290 PF13662 Toprim domain wNo_04320 PF00183 Hsp90 protein wNo_04360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_04400 PF00155 Aminotransferase class I and II wNo_04420 PF09285 Elongation factor P, C-terminal wNo_04420 PF08207 Elongation factor P (EF-P) KOW-like domain wNo_04420 PF01132 Elongation factor P (EF-P) OB domain wNo_04430 PF01782 RimM N-terminal domain wNo_04430 PF05239 PRC-barrel domain wNo_04450 PF00202 Aminotransferase class-III wNo_04460 PF13426 PAS domain wNo_04460 PF13188 PAS domain wNo_04460 PF00989 PAS fold wNo_04460 PF00512 His Kinase A (phospho-acceptor) domain wNo_04460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wNo_04480 PF00814 Glycoprotease family wNo_04500 PF00664 ABC transporter transmembrane region wNo_04500 PF00005 ABC transporter wNo_04520 PF02817 e3 binding domain wNo_04520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) wNo_04520 PF00364 Biotin-requiring enzyme wNo_04550 PF17862 AAA+ lid domain wNo_04550 PF00004 ATPase family associated with various cellular activities (AAA) wNo_04550 PF01434 Peptidase family M41 wNo_04550 PF06480 FtsH Extracellular wNo_04560 PF01171 PP-loop family wNo_04570 PF00691 OmpA family wNo_04620 PF00719 Inorganic pyrophosphatase wNo_04630 PF09312 SurA N-terminal domain wNo_04640 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_04690 PF02401 LytB protein wNo_04730 PF00436 Single-strand binding protein family wNo_04740 PF00701 Dihydrodipicolinate synthetase family wNo_04750 PF08240 Alcohol dehydrogenase GroES-like domain wNo_04750 PF00107 Zinc-binding dehydrogenase wNo_04770 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 wNo_04780 PF01027 Inhibitor of apoptosis-promoting Bax1 wNo_04790 PF00266 Aminotransferase class-V wNo_04800 PF02129 X-Pro dipeptidyl-peptidase (S15 family) wNo_04820 PF00005 ABC transporter wNo_04830 PF01521 Iron-sulphur cluster biosynthesis wNo_04840 PF13286 Phosphohydrolase-associated domain wNo_04840 PF01966 HD domain wNo_04850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region wNo_04850 PF01872 RibD C-terminal domain wNo_04870 PF01509 TruB family pseudouridylate synthase (N terminal domain) wNo_04870 PF16198 tRNA pseudouridylate synthase B C-terminal domain wNo_04880 PF00312 Ribosomal protein S15 wNo_04890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain wNo_04890 PF00575 S1 RNA binding domain wNo_04890 PF00013 KH domain wNo_04890 PF01138 3' exoribonuclease family, domain 1 wNo_04890 PF03725 3' exoribonuclease family, domain 2 wNo_04900 PF00834 Ribulose-phosphate 3 epimerase family wNo_04930 PF00162 Phosphoglycerate kinase wNo_04940 PF00464 Serine hydroxymethyltransferase wNo_04970 PF00893 Small Multidrug Resistance protein wNo_04990 PF01208 Uroporphyrinogen decarboxylase (URO-D) wNo_05000 PF00571 CBS domain wNo_05000 PF03471 Transporter associated domain wNo_05050 PF01098 Cell cycle protein wNo_05060 PF00266 Aminotransferase class-V wNo_05070 PF04002 RadC-like JAB domain wNo_05160 PF00753 Metallo-beta-lactamase superfamily wNo_05160 PF03772 Competence protein wNo_05170 PF02223 Thymidylate kinase wNo_05190 PF02254 TrkA-N domain wNo_05190 PF00999 Sodium/hydrogen exchanger family wNo_05200 PF00696 Amino acid kinase family wNo_05200 PF13840 ACT domain wNo_05200 PF01842 ACT domain wNo_05210 PF02463 RecF/RecN/SMC N terminal domain wNo_05220 PF00578 AhpC/TSA family wNo_05230 PF02951 Prokaryotic glutathione synthetase, N-terminal domain wNo_05230 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain wNo_05240 PF04101 Glycosyltransferase family 28 C-terminal domain wNo_05240 PF03033 Glycosyltransferase family 28 N-terminal domain wNo_05260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain wNo_05260 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_05290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal wNo_05290 PF01926 50S ribosome-binding GTPase wNo_05310 PF01039 Carboxyl transferase domain wNo_05340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region wNo_05340 PF01243 Pyridoxamine 5'-phosphate oxidase wNo_05370 PF00528 Binding-protein-dependent transport system inner membrane component wNo_05380 PF01245 Ribosomal protein L19 wNo_05390 PF01746 tRNA (Guanine-1)-methyltransferase wNo_05400 PF01259 SAICAR synthetase wNo_05410 PF02769 AIR synthase related protein, C-terminal domain wNo_05410 PF00586 AIR synthase related protein, N-terminal domain wNo_05450 PF01351 Ribonuclease HII wNo_05460 PF00953 Glycosyl transferase family 4 wNo_05480 PF02245 Methylpurine-DNA glycosylase (MPG) wNo_05510 PF10609 NUBPL iron-transfer P-loop NTPase wNo_05530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_05560 PF01594 AI-2E family transporter wNo_05580 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase wNo_05580 PF02542 YgbB family wNo_05590 PF17762 HTH domain found in ParB protein wNo_05590 PF02195 ParB-like nuclease domain wNo_05600 PF13614 AAA domain wNo_05610 PF00072 Response regulator receiver domain wNo_05610 PF13188 PAS domain wNo_05610 PF08448 PAS fold wNo_05610 PF00512 His Kinase A (phospho-acceptor) domain wNo_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wNo_05620 PF01218 Coproporphyrinogen III oxidase wNo_05640 PF04452 RNA methyltransferase wNo_05660 PF08442 ATP-grasp domain wNo_05660 PF00549 CoA-ligase wNo_05670 PF02629 CoA binding domain wNo_05670 PF00549 CoA-ligase wNo_05680 PF01678 Diaminopimelate epimerase wNo_05700 PF00881 Nitroreductase family wNo_05710 PF02632 BioY family wNo_05740 PF00521 DNA gyrase/topoisomerase IV, subunit A wNo_05740 PF03989 DNA gyrase C-terminal domain, beta-propeller wNo_05750 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal wNo_05750 PF00355 Rieske [2Fe-2S] domain wNo_05770 PF01523 Putative modulator of DNA gyrase wNo_05800 PF02875 Mur ligase family, glutamate ligase domain wNo_05800 PF08245 Mur ligase middle domain wNo_05820 PF03364 Polyketide cyclase / dehydrase and lipid transport wNo_05830 PF13462 Thioredoxin wNo_05880 PF12169 DNA polymerase III subunits gamma and tau domain III wNo_05890 PF02575 YbaB/EbfC DNA-binding family wNo_05900 PF13505 Outer membrane protein beta-barrel domain wNo_05910 PF00140 Sigma-70 factor, region 1.2 wNo_05910 PF04542 Sigma-70 region 2 wNo_05910 PF04545 Sigma-70, region 4 wNo_05930 PF02768 DNA polymerase III beta subunit, C-terminal domain wNo_05930 PF02767 DNA polymerase III beta subunit, central domain wNo_05930 PF00712 DNA polymerase III beta subunit, N-terminal domain wNo_05940 PF01416 tRNA pseudouridine synthase wNo_05950 PF00154 recA bacterial DNA recombination protein wNo_05960 PF01195 Peptidyl-tRNA hydrolase wNo_05970 PF01386 Ribosomal L25p family wNo_05970 PF14693 Ribosomal protein TL5, C-terminal domain wNo_05990 PF01795 MraW methylase family wNo_06000 PF00083 Sugar (and other) transporter wNo_06010 PF00557 Metallopeptidase family M24 wNo_06020 PF02491 SHS2 domain inserted in FTSA wNo_06030 PF01327 Polypeptide deformylase wNo_06040 PF03167 Uracil DNA glycosylase superfamily wNo_06110 PF13180 PDZ domain wNo_06120 PF01145 SPFH domain / Band 7 family wNo_06130 PF01145 SPFH domain / Band 7 family wNo_06140 PF08676 MutL C terminal dimerisation domain wNo_06140 PF01119 DNA mismatch repair protein, C-terminal domain wNo_06150 PF00731 AIR carboxylase wNo_06170 PF01192 RNA polymerase Rpb6 wNo_06190 PF03334 Na+/H+ antiporter subunit wNo_06200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wNo_06200 PF00361 Proton-conducting membrane transporter wNo_06200 PF13244 Domain of unknown function (DUF4040) wNo_06220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L wNo_06230 PF04546 Sigma-70, non-essential region wNo_06230 PF03979 Sigma-70 factor, region 1.1 wNo_06230 PF00140 Sigma-70 factor, region 1.2 wNo_06230 PF04542 Sigma-70 region 2 wNo_06230 PF04539 Sigma-70 region 3 wNo_06230 PF04545 Sigma-70, region 4 wNo_06260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit wNo_06270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit wNo_06290 PF00483 Nucleotidyl transferase wNo_06290 PF01050 Mannose-6-phosphate isomerase wNo_06300 PF02687 FtsX-like permease family wNo_06300 PF12704 MacB-like periplasmic core domain wNo_06330 PF00231 ATP synthase wNo_06340 PF01523 Putative modulator of DNA gyrase wNo_06350 PF00313 'Cold-shock' DNA-binding domain wNo_06360 PF00271 Helicase conserved C-terminal domain wNo_06360 PF00270 DEAD/DEAH box helicase wNo_06370 PF02861 Clp amino terminal domain, pathogenicity island component wNo_06370 PF10431 C-terminal, D2-small domain, of ClpB protein wNo_06370 PF07724 AAA domain (Cdc48 subfamily) wNo_06370 PF00004 ATPase family associated with various cellular activities (AAA) wNo_06370 PF17871 AAA lid domain wNo_06390 PF01791 DeoC/LacD family aldolase wNo_06410 PF01180 Dihydroorotate dehydrogenase wNo_06420 PF00035 Double-stranded RNA binding motif wNo_06420 PF14622 Ribonuclease-III-like wNo_06430 PF02630 SCO1/SenC wNo_06440 PF00929 Exonuclease wNo_06460 PF02556 Preprotein translocase subunit SecB wNo_06470 PF00330 Aconitase family (aconitate hydratase) wNo_06470 PF00694 Aconitase C-terminal domain wNo_06480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain wNo_06480 PF14850 DNA-binding domain of Proline dehydrogenase wNo_06480 PF01619 Proline dehydrogenase wNo_06480 PF00171 Aldehyde dehydrogenase family wNo_06500 PF02789 Cytosol aminopeptidase family, N-terminal domain wNo_06500 PF00883 Cytosol aminopeptidase family, catalytic domain wNo_06520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region wNo_06520 PF00384 Molybdopterin oxidoreductase wNo_06520 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal wNo_06530 PF00146 NADH dehydrogenase wNo_06540 PF00490 Delta-aminolevulinic acid dehydratase wNo_06560 PF02091 Glycyl-tRNA synthetase alpha subunit wNo_06570 PF02092 Glycyl-tRNA synthetase beta subunit wNo_06570 PF05746 DALR anticodon binding domain wNo_06580 PF08459 UvrC Helix-hairpin-helix N-terminal wNo_06580 PF02151 UvrB/uvrC motif wNo_06580 PF01541 GIY-YIG catalytic domain wNo_06600 PF08032 RNA 2'-O ribose methyltransferase substrate binding wNo_06600 PF00588 SpoU rRNA Methylase family wNo_06660 PF00579 tRNA synthetases class I (W and Y) wNo_06730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_06760 PF00589 Phage integrase family wNo_06760 PF02899 Phage integrase, N-terminal SAM-like domain wNo_06780 PF01649 Ribosomal protein S20 wNo_06790 PF00285 Citrate synthase, C-terminal domain wNo_06810 PF01541 GIY-YIG catalytic domain wNo_06830 PF17864 RuvB AAA lid domain wNo_06830 PF05496 Holliday junction DNA helicase RuvB P-loop domain wNo_06830 PF05491 RuvB C-terminal winged helix domain wNo_06840 PF01330 RuvA N terminal domain wNo_06840 PF07499 RuvA, C-terminal domain wNo_06850 PF00034 Cytochrome c wNo_06870 PF00580 UvrD/REP helicase N-terminal domain wNo_06870 PF13361 UvrD-like helicase C-terminal domain wNo_06890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 wNo_06900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L wNo_06910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wNo_06910 PF00361 Proton-conducting membrane transporter wNo_06920 PF00361 Proton-conducting membrane transporter wNo_06930 PF00361 Proton-conducting membrane transporter wNo_06940 PF02237 Biotin protein ligase C terminal domain wNo_06940 PF03099 Biotin/lipoate A/B protein ligase family wNo_06940 PF08279 HTH domain wNo_06960 PF03100 CcmE wNo_06990 PF10531 SLBB domain wNo_06990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region wNo_06990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit wNo_07000 PF00707 Translation initiation factor IF-3, C-terminal domain wNo_07000 PF05198 Translation initiation factor IF-3, N-terminal domain wNo_07010 PF03129 Anticodon binding domain wNo_07010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wNo_07010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain wNo_07020 PF12838 4Fe-4S dicluster domain wNo_07030 PF01926 50S ribosome-binding GTPase wNo_07030 PF10396 GTP-binding protein TrmE N-terminus wNo_07030 PF12631 MnmE helical domain wNo_07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_07090 PF00156 Phosphoribosyl transferase domain wNo_07090 PF13537 Glutamine amidotransferase domain wNo_07110 PF03631 Virulence factor BrkB wNo_07130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain wNo_07130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain wNo_07130 PF02142 MGS-like domain wNo_07140 PF01219 Prokaryotic diacylglycerol kinase wNo_07150 PF00849 RNA pseudouridylate synthase wNo_07220 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_07400 PF00293 NUDIX domain wNo_07410 PF01026 TatD related DNase wNo_07420 PF00056 lactate/malate dehydrogenase, NAD binding domain wNo_07420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain wNo_07430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit wNo_07440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit wNo_07450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 wNo_07460 PF01230 HIT domain wNo_07490 PF08245 Mur ligase middle domain wNo_07490 PF01225 Mur ligase family, catalytic domain wNo_07490 PF02875 Mur ligase family, glutamate ligase domain wNo_07500 PF08338 Domain of unknown function (DUF1731) wNo_07500 PF01370 NAD dependent epimerase/dehydratase family wNo_07510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III wNo_07510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal wNo_07520 PF02504 Fatty acid synthesis protein wNo_07530 PF01783 Ribosomal L32p protein family wNo_07540 PF02405 Permease MlaE wNo_07550 PF08402 TOBE domain wNo_07550 PF00005 ABC transporter wNo_07560 PF02978 Signal peptide binding domain wNo_07560 PF00448 SRP54-type protein, GTPase domain wNo_07560 PF02881 SRP54-type protein, helical bundle domain wNo_07580 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_07590 PF07977 FabA-like domain wNo_07610 PF01103 Surface antigen wNo_07610 PF07244 Surface antigen variable number repeat wNo_07620 PF02163 Peptidase family M50 wNo_07620 PF17820 PDZ domain wNo_07650 PF00216 Bacterial DNA-binding protein wNo_07660 PF00575 S1 RNA binding domain wNo_07670 PF02390 Putative methyltransferase wNo_07740 PF00226 DnaJ domain wNo_07740 PF01556 DnaJ C terminal domain wNo_07740 PF00684 DnaJ central domain wNo_07750 PF01545 Cation efflux family wNo_07770 PF02660 Glycerol-3-phosphate acyltransferase wNo_07780 PF01235 Sodium:alanine symporter family wNo_07790 PF01235 Sodium:alanine symporter family wNo_07800 PF01066 CDP-alcohol phosphatidyltransferase wNo_07810 PF02666 Phosphatidylserine decarboxylase wNo_07840 PF00204 DNA gyrase B wNo_07840 PF00986 DNA gyrase B subunit, carboxyl terminus wNo_07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wNo_07840 PF01751 Toprim domain wNo_07850 PF01425 Amidase wNo_07860 PF00476 DNA polymerase family A wNo_07860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain wNo_07860 PF01367 5'-3' exonuclease, C-terminal SAM fold wNo_07920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain wNo_07920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III wNo_07920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II wNo_07920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I wNo_07940 PF00677 Lumazine binding domain wNo_07960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain wNo_07960 PF01409 tRNA synthetases class II core domain (F) wNo_07970 PF12804 MobA-like NTP transferase domain wNo_07970 PF14602 Hexapeptide repeat of succinyl-transferase wNo_07970 PF00132 Bacterial transferase hexapeptide (six repeats) wNo_08000 PF00829 Ribosomal prokaryotic L21 protein wNo_08010 PF01016 Ribosomal L27 protein wNo_08020 PF02773 S-adenosylmethionine synthetase, C-terminal domain wNo_08020 PF00438 S-adenosylmethionine synthetase, N-terminal domain wNo_08020 PF02772 S-adenosylmethionine synthetase, central domain wNo_08030 PF03070 TENA/THI-4/PQQC family wNo_08050 PF00510 Cytochrome c oxidase subunit III wNo_08060 PF02075 Crossover junction endodeoxyribonuclease RuvC wNo_08070 PF03652 Holliday junction resolvase wNo_08080 PF03477 ATP cone domain wNo_08080 PF02867 Ribonucleotide reductase, barrel domain wNo_08080 PF00317 Ribonucleotide reductase, all-alpha domain wNo_08125 PF00468 Ribosomal protein L34 wNo_08130 PF00528 Binding-protein-dependent transport system inner membrane component wNo_08140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wNo_08140 PF02874 ATP synthase alpha/beta family, beta-barrel domain wNo_08150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain wNo_08170 PF00923 Transaldolase/Fructose-6-phosphate aldolase wNo_08190 PF00117 Glutamine amidotransferase class-I wNo_08190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain wNo_08200 PF03144 Elongation factor Tu domain 2 wNo_08200 PF03143 Elongation factor Tu C-terminal domain wNo_08200 PF00009 Elongation factor Tu GTP binding domain wNo_08210 PF00338 Ribosomal protein S10p/S20e wNo_08220 PF00297 Ribosomal protein L3 wNo_08230 PF00573 Ribosomal protein L4/L1 family wNo_08240 PF00276 Ribosomal protein L23 wNo_08250 PF00181 Ribosomal Proteins L2, RNA binding domain wNo_08250 PF03947 Ribosomal Proteins L2, C-terminal domain wNo_08260 PF00203 Ribosomal protein S19 wNo_08270 PF00237 Ribosomal protein L22p/L17e wNo_08280 PF00189 Ribosomal protein S3, C-terminal domain wNo_08280 PF07650 KH domain wNo_08290 PF00252 Ribosomal protein L16p/L10e wNo_08300 PF00831 Ribosomal L29 protein wNo_08310 PF00366 Ribosomal protein S17 wNo_08320 PF00238 Ribosomal protein L14p/L23e wNo_08330 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 wNo_08340 PF00673 ribosomal L5P family C-terminus wNo_08340 PF00281 Ribosomal protein L5 wNo_08350 PF00253 Ribosomal protein S14p/S29e wNo_08360 PF00410 Ribosomal protein S8 wNo_08370 PF00347 Ribosomal protein L6 wNo_08380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast wNo_08390 PF03719 Ribosomal protein S5, C-terminal domain wNo_08390 PF00333 Ribosomal protein S5, N-terminal domain wNo_08400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A wNo_08410 PF00344 SecY translocase wNo_08430 PF00416 Ribosomal protein S13/S18 wNo_08440 PF00411 Ribosomal protein S11 wNo_08450 PF01000 RNA polymerase Rpb3/RpoA insert domain wNo_08450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain wNo_08450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain wNo_08460 PF01196 Ribosomal protein L17 wNo_08470 PF02021 Uncharacterised protein family UPF0102 wNo_08480 PF00213 ATP synthase delta (OSCP) subunit wNo_08490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wNo_08490 PF00306 ATP synthase alpha/beta chain, C terminal domain wNo_08490 PF02874 ATP synthase alpha/beta family, beta-barrel domain wNo_08500 PF01272 Transcription elongation factor, GreA/GreB, C-term wNo_08500 PF03449 Transcription elongation factor, N-terminal wNo_08570 PF02896 PEP-utilising enzyme, TIM barrel domain wNo_08570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain wNo_08570 PF00391 PEP-utilising enzyme, mobile domain wNo_08590 PF00529 HlyD membrane-fusion protein of T1SS wNo_08590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion wNo_08600 PF00462 Glutaredoxin wNo_08620 PF03949 Malic enzyme, NAD binding domain wNo_08620 PF01515 Phosphate acetyl/butaryl transferase wNo_08620 PF00390 Malic enzyme, N-terminal domain wNo_08630 PF01066 CDP-alcohol phosphatidyltransferase wNo_08660 PF01709 Transcriptional regulator wNo_08670 PF01551 Peptidase family M23 wNo_08670 PF01476 LysM domain wNo_08670 PF08525 Opacity-associated protein A N-terminal motif wNo_08730 PF07690 Major Facilitator Superfamily wNo_08740 PF01209 ubiE/COQ5 methyltransferase family wNo_08750 PF00005 ABC transporter wNo_08750 PF00664 ABC transporter transmembrane region wNo_08780 PF03485 Arginyl tRNA synthetase N terminal domain wNo_08780 PF05746 DALR anticodon binding domain wNo_08780 PF00750 tRNA synthetases class I (R) wNo_08790 PF00005 ABC transporter wNo_08820 PF14437 MafB19-like deaminase wNo_08840 PF00117 Glutamine amidotransferase class-I wNo_08840 PF06418 CTP synthase N-terminus wNo_08890 PF01380 SIS domain wNo_08900 PF02699 Preprotein translocase subunit wNo_08910 PF00318 Ribosomal protein S2 wNo_08920 PF00889 Elongation factor TS wNo_08930 PF00696 Amino acid kinase family wNo_08940 PF01765 Ribosome recycling factor wNo_08970 PF02386 Cation transport protein wNo_08980 PF00692 dUTPase wNo_09000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_09050 PF18755 Restriction Enzyme Adenine Methylase Associated wNo_09050 PF01555 DNA methylase wNo_09100 PF06250 YhcG PDDEXK nuclease domain wNo_09100 PF17761 DUF1016 N-terminal domain wNo_09200 PF03462 PCRF domain wNo_09200 PF00472 RF-1 domain wNo_09210 PF01926 50S ribosome-binding GTPase wNo_09220 PF00696 Amino acid kinase family wNo_09280 PF01297 Zinc-uptake complex component A periplasmic wNo_09290 PF00005 ABC transporter wNo_09300 PF03109 ABC1 family wNo_09320 PF00471 Ribosomal protein L33 wNo_09330 PF12111 Polyribonucleotide phosphorylase C terminal wNo_09330 PF00575 S1 RNA binding domain wNo_09330 PF10150 Ribonuclease E/G family wNo_09340 PF00012 Hsp70 protein wNo_09350 PF01722 BolA-like protein wNo_09360 PF01053 Cys/Met metabolism PLP-dependent enzyme wNo_09370 PF08245 Mur ligase middle domain wNo_09370 PF02875 Mur ligase family, glutamate ligase domain wNo_09400 PF01300 Telomere recombination wNo_09410 PF09115 DNA polymerase III, delta subunit, C terminal wNo_09440 PF13244 Domain of unknown function (DUF4040) wNo_09440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wNo_09440 PF00361 Proton-conducting membrane transporter wNo_09450 PF03796 DnaB-like helicase C terminal domain wNo_09450 PF00772 DnaB-like helicase N terminal domain wNo_09520 PF00210 Ferritin-like domain wNo_09530 PF02104 SURF1 family wNo_09540 PF02875 Mur ligase family, glutamate ligase domain wNo_09540 PF08245 Mur ligase middle domain wNo_09540 PF01225 Mur ligase family, catalytic domain wNo_09560 PF03952 Enolase, N-terminal domain wNo_09560 PF00113 Enolase, C-terminal TIM barrel domain wNo_09570 PF01018 GTP1/OBG wNo_09570 PF01926 50S ribosome-binding GTPase wNo_09600 PF02325 YGGT family wNo_09610 PF17854 FtsK alpha domain wNo_09610 PF09397 Ftsk gamma domain wNo_09610 PF01580 FtsK/SpoIIIE family wNo_09610 PF13491 4TM region of DNA translocase FtsK/SpoIIIE wNo_09640 PF04551 GcpE protein wNo_09680 PF01258 Prokaryotic dksA/traR C4-type zinc finger wNo_09700 PF00596 Class II Aldolase and Adducin N-terminal domain wNo_09720 PF00814 Glycoprotease family wNo_09740 PF08241 Methyltransferase domain wNo_09750 PF08278 DNA primase DnaG DnaB-binding wNo_09750 PF13662 Toprim domain wNo_09750 PF08275 DNA primase catalytic core, N-terminal domain wNo_09750 PF01807 CHC2 zinc finger wNo_09750 PF10410 DnaB-helicase binding domain of primase wNo_09770 PF00226 DnaJ domain wNo_09770 PF01556 DnaJ C terminal domain wNo_09770 PF00684 DnaJ central domain wNo_09780 PF00111 2Fe-2S iron-sulfur cluster binding domain wNo_09800 PF03918 Cytochrome C biogenesis protein wNo_09810 PF13361 UvrD-like helicase C-terminal domain wNo_09810 PF00580 UvrD/REP helicase N-terminal domain wNo_09810 PF12705 PD-(D/E)XK nuclease superfamily wNo_09820 PF00288 GHMP kinases N terminal domain wNo_09820 PF08544 GHMP kinases C terminal wNo_09840 PF00950 ABC 3 transport family wNo_09870 PF00749 tRNA synthetases class I (E and Q), catalytic domain wNo_09890 PF01743 Poly A polymerase head domain wNo_09890 PF12627 Probable RNA and SrmB- binding site of polymerase A wNo_09890 PF13735 tRNA nucleotidyltransferase domain 2 putative wNo_09940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain wNo_09940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain wNo_09950 PF00902 Sec-independent protein translocase protein (TatC) wNo_09970 PF01624 MutS domain I wNo_09970 PF05188 MutS domain II wNo_09970 PF05192 MutS domain III wNo_09970 PF00488 MutS domain V wNo_09970 PF05190 MutS family domain IV wNo_09990 PF00152 tRNA synthetases class II (D, K and N) wNo_09990 PF01336 OB-fold nucleic acid binding domain wNo_09990 PF02938 GAD domain wNo_10000 PF08946 Osmosensory transporter coiled coil wNo_10000 PF00083 Sugar (and other) transporter wNo_10010 PF01479 S4 domain wNo_10010 PF00849 RNA pseudouridylate synthase wNo_10040 PF03462 PCRF domain wNo_10040 PF00472 RF-1 domain wNo_10050 PF03448 MgtE intracellular N domain wNo_10050 PF01769 Divalent cation transporter wNo_10050 PF00571 CBS domain wNo_10190 PF04984 Phage tail sheath protein subtilisin-like domain wNo_10190 PF17482 Phage tail sheath C-terminal domain wNo_10290 PF12256 Insecticide toxin TcdB middle/N-terminal region wNo_10290 PF12255 Insecticide toxin TcdB middle/C-terminal region wNo_10290 PF03534 Salmonella virulence plasmid 65kDa B protein wNo_10310 PF18413 Neuraminidase-like domain wNo_10310 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain wNo_10310 PF18413 Neuraminidase-like domain wNo_10310 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain wNo_10350 PF04002 RadC-like JAB domain wNo_10370 PF00533 BRCA1 C Terminus (BRCT) domain wNo_10370 PF01653 NAD-dependent DNA ligase adenylation domain wNo_10370 PF03120 NAD-dependent DNA ligase OB-fold domain wNo_10370 PF12826 Helix-hairpin-helix motif wNo_10410 PF07478 D-ala D-ala ligase C-terminus wNo_10410 PF01820 D-ala D-ala ligase N-terminus wNo_10430 PF11953 Domain of unknown function (DUF3470) wNo_10430 PF00037 4Fe-4S binding domain wNo_10440 PF02481 DNA recombination-mediator protein A wNo_10440 PF17782 DprA winged helix domain wNo_10460 PF01043 SecA preprotein cross-linking domain wNo_10460 PF07517 SecA DEAD-like domain wNo_10460 PF02810 SEC-C motif wNo_10460 PF07516 SecA Wing and Scaffold domain wNo_10500 PF02646 RmuC family wNo_10510 PF00768 D-alanyl-D-alanine carboxypeptidase wNo_10510 PF07943 Penicillin-binding protein 5, C-terminal domain wNo_10520 PF04002 RadC-like JAB domain wNo_10540 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal wNo_10540 PF01578 Cytochrome C assembly protein wNo_10570 PF10417 C-terminal domain of 1-Cys peroxiredoxin wNo_10570 PF00578 AhpC/TSA family wNo_10580 PF07992 Pyridine nucleotide-disulphide oxidoreductase wNo_10670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wNo_10710 PF00925 GTP cyclohydrolase II wNo_10720 PF04335 VirB8 protein wNo_10750 PF00437 Type II/IV secretion system protein wNo_10760 PF02534 Type IV secretory system Conjugative DNA transfer wNo_10780 PF01751 Toprim domain wNo_10780 PF01396 Topoisomerase DNA binding C4 zinc finger wNo_10780 PF01131 DNA topoisomerase wNo_10780 PF13368 Topoisomerase C-terminal repeat wNo_10790 PF00083 Sugar (and other) transporter wNo_10790 PF07690 Major Facilitator Superfamily wNo_10800 PF18073 Rubredoxin metal binding domain wNo_10810 PF02881 SRP54-type protein, helical bundle domain wNo_10810 PF00448 SRP54-type protein, GTPase domain wNo_10820 PF01592 NifU-like N terminal domain wNo_10830 PF01521 Iron-sulphur cluster biosynthesis wNo_10840 PF07743 HSCB C-terminal oligomerisation domain wNo_10840 PF00226 DnaJ domain wNo_10850 PF00012 Hsp70 protein wNo_10860 PF10502 Signal peptidase, peptidase S26 wNo_10880 PF02780 Transketolase, C-terminal domain wNo_10880 PF02779 Transketolase, pyrimidine binding domain wNo_10880 PF00364 Biotin-requiring enzyme wNo_10900 PF17755 UvrA DNA-binding domain wNo_10900 PF17760 UvrA interaction domain wNo_10930 PF17862 AAA+ lid domain wNo_10930 PF00004 ATPase family associated with various cellular activities (AAA) wNo_10930 PF01434 Peptidase family M41 wNo_11000 PF00929 Exonuclease wNo_11020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family wNo_11020 PF04055 Radical SAM superfamily wNo_11030 PF00830 Ribosomal L28 family wNo_11050 PF04384 Iron-sulphur cluster assembly wNo_11060 PF00163 Ribosomal protein S4/S9 N-terminal domain wNo_11060 PF01479 S4 domain wNo_11070 PF02779 Transketolase, pyrimidine binding domain wNo_11070 PF00456 Transketolase, thiamine diphosphate binding domain wNo_11070 PF02780 Transketolase, C-terminal domain wNo_11080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase wNo_11080 PF14572 Phosphoribosyl synthetase-associated domain wNo_11090 PF02686 Glu-tRNAGln amidotransferase C subunit wNo_11100 PF07676 WD40-like Beta Propeller Repeat wNo_11110 PF17770 Ribonuclease J C-terminal domain wNo_11110 PF12706 Beta-lactamase superfamily domain wNo_11110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain wNo_11120 PF00226 DnaJ domain wNo_11120 PF01556 DnaJ C terminal domain wNo_11120 PF00684 DnaJ central domain wNo_11140 PF00586 AIR synthase related protein, N-terminal domain wNo_11140 PF02769 AIR synthase related protein, C-terminal domain wNo_11140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain wNo_11170 PF10415 Fumarase C C-terminus wNo_11170 PF00206 Lyase wNo_11200 PF01979 Amidohydrolase family wNo_11210 PF01612 3'-5' exonuclease wNo_11210 PF00570 HRDC domain wNo_11220 PF01121 Dephospho-CoA kinase wNo_11250 PF09334 tRNA synthetases class I (M) wNo_11250 PF08264 Anticodon-binding domain of tRNA wNo_11330 PF01040 UbiA prenyltransferase family wNo_11340 PF02033 Ribosome-binding factor A wNo_11350 PF00009 Elongation factor Tu GTP binding domain wNo_11350 PF11987 Translation-initiation factor 2 wNo_11350 PF04760 Translation initiation factor IF-2, N-terminal region wNo_11360 PF08529 NusA N-terminal domain wNo_11360 PF13184 NusA-like KH domain wNo_11360 PF00575 S1 RNA binding domain wNo_11390 PF00120 Glutamine synthetase, catalytic domain