wOo_00050	SM00564	beta-propeller repeat
wOo_00170	SM00072	Guanylate kinase homologues.
wOo_00190	SM00248	ankyrin repeats
wOo_00290	SM00474	3'-5' exonuclease
wOo_00320	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
wOo_00350	SM00116	Domain in cystathionine beta-synthase and other proteins.
wOo_00350	SM01240	wOo_00350
wOo_00360	SM00986	Uracil DNA glycosylase superfamily
wOo_00360	SM00987	UreE urease accessory protein, C-terminal domain 
wOo_00380	SM00842	Cell division protein FtsA
wOo_00540	SM00878	Biotin carboxylase C-terminal domain
wOo_00690	SM00382	ATPases associated with a variety of cellular activities
wOo_00730	SM00840	wOo_00730
wOo_00850	SM00382	ATPases associated with a variety of cellular activities
wOo_00930	SM00028	Tetratricopeptide repeats
wOo_00950	SM00732	Likely ribonuclease with RNase H fold.
wOo_00970	SM00465	GIY-YIG type nucleases (URI domain)
wOo_01030	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
wOo_01030	SM00534	ATPase domain of DNA mismatch repair MUTS family
wOo_01100	SM00387	Histidine kinase-like ATPases
wOo_01100	SM00433	TopoisomeraseII
wOo_01240	SM00798	AICARFT/IMPCHase bienzyme
wOo_01240	SM00851	MGS-like domain
wOo_01300	SM00382	ATPases associated with a variety of cellular activities
wOo_01550	SM00838	Elongation factor G C-terminus
wOo_01550	SM00889	Elongation factor G, domain IV
wOo_01590	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
wOo_01600	SM00649	Ribosomal protein L11/L12
wOo_01640	SM00663	RNA polymerase I subunit A N-terminus
wOo_01690	SM00357	Cold shock protein domain
wOo_01730	SM00853	MutL C terminal dimerisation domain
wOo_01730	SM01340	wOo_01730
wOo_01740	SM01001	AIR carboxylase
wOo_01750	SM00530	Helix-turn-helix XRE-family like proteins 
wOo_01760	SM01409	wOo_01760
wOo_02150	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
wOo_02150	SM01232	wOo_02150
wOo_02200	SM00382	ATPases associated with a variety of cellular activities
wOo_02250	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
wOo_02280	SM00849	Metallo-beta-lactamase superfamily
wOo_02300	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
wOo_02310	SM00478	endonuclease III
wOo_02310	SM00525	wOo_02310
wOo_02330	SM01329	wOo_02330
wOo_02520	SM00474	3'-5' exonuclease
wOo_02570	SM00957	SecA DEAD-like domain
wOo_02570	SM00958	SecA preprotein cross-linking domain
wOo_03000	SM00382	ATPases associated with a variety of cellular activities
wOo_03000	SM00962	SRP54-type protein, GTPase domain
wOo_03000	SM00963	SRP54-type protein, helical bundle domain
wOo_03030	SM00271	DnaJ molecular chaperone homology domain
wOo_03140	SM00116	Domain in cystathionine beta-synthase and other proteins.
wOo_03140	SM01091	Transporter associated domain
wOo_03330	SM00434	DNA Topoisomerase IV
wOo_03440	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
wOo_03440	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
wOo_03440	SM00493	wOo_03440
wOo_03460	SM00450	Rhodanese Homology Domain
wOo_03500	SM00859	Semialdehyde dehydrogenase, NAD binding domain
wOo_03590	SM00382	ATPases associated with a variety of cellular activities
wOo_03590	SM00962	SRP54-type protein, GTPase domain
wOo_03590	SM00963	SRP54-type protein, helical bundle domain
wOo_03630	SM00935	Outer membrane protein (OmpH-like)
wOo_03650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
wOo_03680	SM00316	Ribosomal protein S1-like RNA-binding domain
wOo_03770	SM00480	DNA polymerase III beta subunit
wOo_03790	SM00382	ATPases associated with a variety of cellular activities
wOo_03790	SM00843	wOo_03790
wOo_03870	SM01323	wOo_03870
wOo_03930	SM01400	wOo_03930
wOo_03950	SM00729	Elongator protein 3, MiaB family, Radical SAM
wOo_04110	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
wOo_04230	SM01192	wOo_04230
wOo_04230	SM01193	wOo_04230
wOo_04300	SM01211	wOo_04300
wOo_04380	SM01091	Transporter associated domain
wOo_04530	SM01209	wOo_04530
wOo_04530	SM01210	wOo_04530
wOo_04760	SM01207	wOo_04760
wOo_04980	SM00825	Beta-ketoacyl synthase
wOo_05020	SM00358	Double-stranded RNA binding motif
wOo_05020	SM00535	Ribonuclease III family
wOo_05050	SM01133	wOo_05050
wOo_05130	SM00487	DEAD-like helicases superfamily
wOo_05130	SM00490	helicase superfamily c-terminal domain
wOo_05150	SM00248	ankyrin repeats
wOo_05200	SM00729	Elongator protein 3, MiaB family, Radical SAM
wOo_05230	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
wOo_05280	SM00937	wOo_05280
wOo_05350	SM00864	Tubulin/FtsZ family, GTPase domain
wOo_05350	SM00865	Tubulin/FtsZ family, C-terminal domain
wOo_05460	SM00448	cheY-homologous receiver domain
wOo_05460	SM00862	Transcriptional regulatory protein, C terminal
wOo_05570	SM00841	Elongation factor P, C-terminal
wOo_05570	SM01185	wOo_05570
wOo_05630	SM00387	Histidine kinase-like ATPases
wOo_05700	SM00382	ATPases associated with a variety of cellular activities
wOo_05840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
wOo_05850	SM00838	Elongation factor G C-terminus
wOo_05860	SM00937	wOo_05860
wOo_05870	SM00116	Domain in cystathionine beta-synthase and other proteins.
wOo_05870	SM00924	MgtE intracellular N domain
wOo_05880	SM00861	Transketolase, pyrimidine binding domain
wOo_05900	SM00271	DnaJ molecular chaperone homology domain
wOo_05930	SM00387	Histidine kinase-like ATPases
wOo_05930	SM00388	His Kinase A (phosphoacceptor) domain
wOo_05930	SM00448	cheY-homologous receiver domain
wOo_05960	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
wOo_06020	SM00936	Penicillin-binding protein 5, C-terminal domain 
wOo_06030	SM00873	B3/4 domain
wOo_06030	SM00874	tRNA synthetase B5 domain
wOo_06030	SM00896	Ferredoxin-fold anticodon binding domain
wOo_06120	SM00400	zinc finger
wOo_06120	SM00493	wOo_06120
wOo_06180	SM00883	Chaperonin 10 Kd subunit
wOo_06290	SM00244	prohibitin homologues
wOo_06300	SM00244	prohibitin homologues
wOo_06310	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
wOo_06430	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
wOo_06430	SM00475	5'-3' exonuclease
wOo_06430	SM00482	DNA polymerase A domain
wOo_06450	SM00382	ATPases associated with a variety of cellular activities
wOo_06450	SM01086	C-terminal, D2-small domain, of ClpB protein
wOo_06530	SM00562	wOo_06530
wOo_06550	SM00382	ATPases associated with a variety of cellular activities
wOo_06800	SM00919	Malic enzyme, NAD binding domain
wOo_06800	SM01274	wOo_06800
wOo_06850	SM00487	DEAD-like helicases superfamily
wOo_06850	SM00490	helicase superfamily c-terminal domain
wOo_06890	SM00905	Dihydroneopterin aldolase
wOo_06920	SM00292	breast cancer carboxy-terminal domain
wOo_06920	SM00532	Ligase N family
wOo_06950	SM00267	diguanylate cyclase
wOo_06950	SM00448	cheY-homologous receiver domain
wOo_06960	SM00448	cheY-homologous receiver domain
wOo_06990	SM00382	ATPases associated with a variety of cellular activities
wOo_06990	SM01086	C-terminal, D2-small domain, of ClpB protein
wOo_07000	SM00729	Elongator protein 3, MiaB family, Radical SAM
wOo_07050	SM00363	S4 RNA-binding domain
wOo_07050	SM01390	wOo_07050
wOo_07060	SM00861	Transketolase, pyrimidine binding domain
wOo_07390	SM00932	Scaffold protein Nfu/NifU N terminal
wOo_07450	SM00382	ATPases associated with a variety of cellular activities
wOo_07820	SM00316	Ribosomal protein S1-like RNA-binding domain
wOo_07820	SM00322	K homology RNA-binding domain
wOo_07830	SM01387	wOo_07830
wOo_07900	SM00382	ATPases associated with a variety of cellular activities
wOo_07920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
wOo_07930	SM01228	wOo_07930
wOo_08210	SM00357	Cold shock protein domain
wOo_08210	SM00382	ATPases associated with a variety of cellular activities
wOo_08210	SM00959	Rho termination factor, N-terminal domain
wOo_08270	SM00316	Ribosomal protein S1-like RNA-binding domain
wOo_08270	SM00322	K homology RNA-binding domain
wOo_08340	SM01004	Delta-aminolevulinic acid dehydratase
wOo_08350	SM01130	wOo_08350
wOo_08410	SM00382	ATPases associated with a variety of cellular activities
wOo_08450	SM00822	wOo_08450
wOo_08600	SM00382	ATPases associated with a variety of cellular activities
wOo_08630	SM00836	DALR anticodon binding domain
wOo_08630	SM01016	Arginyl tRNA synthetase N terminal dom
wOo_08710	SM00382	ATPases associated with a variety of cellular activities
wOo_09010	SM00845	GatB domain
wOo_09030	SM00316	Ribosomal protein S1-like RNA-binding domain
wOo_09130	SM00998	Adenylosuccinate lyase C-terminus
wOo_09170	SM00481	DNA polymerase alpha chain like domain
wOo_09270	SM00881	CoA binding domain
wOo_09310	SM00978	wOo_09310
wOo_09320	SM00479	wOo_09320
wOo_09360	SM00563	Phosphate acyltransferases
wOo_09430	SM00382	ATPases associated with a variety of cellular activities
wOo_09430	SM00464	Found in ATP-dependent protease La (LON)
wOo_09440	SM00382	ATPases associated with a variety of cellular activities
wOo_09440	SM00994	ClpX C4-type zinc finger
wOo_09440	SM01086	C-terminal, D2-small domain, of ClpB protein
wOo_09480	SM00749	bacterial OsmY and nodulation domain
wOo_09540	SM00861	Transketolase, pyrimidine binding domain
wOo_09590	SM00155	Phospholipase D. Active site motifs.
wOo_09610	SM00382	ATPases associated with a variety of cellular activities
wOo_09610	SM00760	Bacterial dnaA protein helix-turn-helix domain
wOo_09620	SM01230	wOo_09620
wOo_09640	SM00788	Adenylosuccinate synthetase
wOo_09990	SM00851	MGS-like domain
wOo_09990	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
wOo_10170	SM00967	RNA 2'-O ribose methyltransferase substrate binding
wOo_10240	SM00662	RNA polymerases D
wOo_10380	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
wOo_10390	SM01374	wOo_10390
wOo_10460	SM01382	wOo_10460
wOo_10460	SM01383	wOo_10460
wOo_10500	SM01403	wOo_10500
wOo_10540	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
