locus-tag class description MWH06_00010 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_00060 PF01555 DNA methylase MWH06_00105 PF17757 UvrB interaction domain MWH06_00105 PF12344 Ultra-violet resistance protein B MWH06_00105 PF02151 UvrB/uvrC motif MWH06_00105 PF04851 Type III restriction enzyme, res subunit MWH06_00105 PF00271 Helicase conserved C-terminal domain MWH06_00130 PF13520 Amino acid permease MWH06_00155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MWH06_00155 PF02403 Seryl-tRNA synthetase N-terminal domain MWH06_00160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MWH06_00160 PF02844 Phosphoribosylglycinamide synthetase, N domain MWH06_00160 PF02843 Phosphoribosylglycinamide synthetase, C domain MWH06_00190 PF01479 S4 domain MWH06_00190 PF00849 RNA pseudouridylate synthase MWH06_00195 PF08946 Osmosensory transporter coiled coil MWH06_00195 PF00083 Sugar (and other) transporter MWH06_00200 PF02938 GAD domain MWH06_00200 PF00152 tRNA synthetases class II (D, K and N) MWH06_00200 PF01336 OB-fold nucleic acid binding domain MWH06_00210 PF00005 ABC transporter MWH06_00225 PF03129 Anticodon binding domain MWH06_00225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MWH06_00230 PF01648 4'-phosphopantetheinyl transferase superfamily MWH06_00235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MWH06_00235 PF13244 Domain of unknown function (DUF4040) MWH06_00235 PF00361 Proton-conducting membrane transporter MWH06_00260 PF01300 Telomere recombination MWH06_00280 PF00271 Helicase conserved C-terminal domain MWH06_00280 PF17191 RecG wedge domain MWH06_00280 PF00270 DEAD/DEAH box helicase MWH06_00285 PF01926 50S ribosome-binding GTPase MWH06_00285 PF01018 GTP1/OBG MWH06_00290 PF03952 Enolase, N-terminal domain MWH06_00290 PF00113 Enolase, C-terminal TIM barrel domain MWH06_00295 PF08245 Mur ligase middle domain MWH06_00295 PF02875 Mur ligase family, glutamate ligase domain MWH06_00295 PF01225 Mur ligase family, catalytic domain MWH06_00300 PF03330 Lytic transglycolase MWH06_00310 PF00464 Serine hydroxymethyltransferase MWH06_00325 PF00155 Aminotransferase class I and II MWH06_00340 PF01207 Dihydrouridine synthase (Dus) MWH06_00345 PF04561 RNA polymerase Rpb2, domain 2 MWH06_00345 PF00623 RNA polymerase Rpb1, domain 2 MWH06_00345 PF04997 RNA polymerase Rpb1, domain 1 MWH06_00345 PF04563 RNA polymerase beta subunit MWH06_00345 PF05000 RNA polymerase Rpb1, domain 4 MWH06_00345 PF04560 RNA polymerase Rpb2, domain 7 MWH06_00345 PF00562 RNA polymerase Rpb2, domain 6 MWH06_00345 PF10385 RNA polymerase beta subunit external 1 domain MWH06_00345 PF04983 RNA polymerase Rpb1, domain 3 MWH06_00345 PF04565 RNA polymerase Rpb2, domain 3 MWH06_00345 PF04998 RNA polymerase Rpb1, domain 5 MWH06_00350 PF16320 Ribosomal protein L7/L12 dimerisation domain MWH06_00350 PF00542 Ribosomal protein L7/L12 C-terminal domain MWH06_00355 PF00466 Ribosomal protein L10 MWH06_00360 PF00687 Ribosomal protein L1p/L10e family MWH06_00365 PF03946 Ribosomal protein L11, N-terminal domain MWH06_00365 PF00298 Ribosomal protein L11, RNA binding domain MWH06_00370 PF00467 KOW motif MWH06_00370 PF02357 Transcription termination factor nusG MWH06_00385 PF03143 Elongation factor Tu C-terminal domain MWH06_00385 PF03144 Elongation factor Tu domain 2 MWH06_00385 PF00009 Elongation factor Tu GTP binding domain MWH06_00390 PF03144 Elongation factor Tu domain 2 MWH06_00390 PF00009 Elongation factor Tu GTP binding domain MWH06_00390 PF03764 Elongation factor G, domain IV MWH06_00390 PF14492 Elongation Factor G, domain II MWH06_00390 PF00679 Elongation factor G C-terminus MWH06_00395 PF00177 Ribosomal protein S7p/S5e MWH06_00400 PF00164 Ribosomal protein S12/S23 MWH06_00410 PF00206 Lyase MWH06_00410 PF10415 Fumarase C C-terminus MWH06_00440 PF09397 Ftsk gamma domain MWH06_00440 PF01580 FtsK/SpoIIIE family MWH06_00440 PF17854 FtsK alpha domain MWH06_00440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MWH06_00445 PF02325 YGGT family MWH06_00470 PF13333 Integrase core domain MWH06_00470 PF00665 Integrase core domain MWH06_00470 PF13276 HTH-like domain MWH06_00480 PF00905 Penicillin binding protein transpeptidase domain MWH06_00480 PF03717 Penicillin-binding Protein dimerisation domain MWH06_00485 PF00457 Glycosyl hydrolases family 11 MWH06_00485 PF03422 Carbohydrate binding module (family 6) MWH06_00485 PF01522 Polysaccharide deacetylase MWH06_00490 PF04002 RadC-like JAB domain MWH06_00515 PF06480 FtsH Extracellular MWH06_00515 PF00004 ATPase family associated with various cellular activities (AAA) MWH06_00515 PF17862 AAA+ lid domain MWH06_00515 PF01434 Peptidase family M41 MWH06_00525 PF00691 OmpA family MWH06_00555 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_00570 PF03232 Ubiquinone biosynthesis protein COQ7 MWH06_00580 PF01926 50S ribosome-binding GTPase MWH06_00580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MWH06_00590 PF01039 Carboxyl transferase domain MWH06_00605 PF06827 Zinc finger found in FPG and IleRS MWH06_00605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MWH06_00605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MWH06_00610 PF01243 Pyridoxamine 5'-phosphate oxidase MWH06_00610 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MWH06_00635 PF03772 Competence protein MWH06_00635 PF00753 Metallo-beta-lactamase superfamily MWH06_00645 PF00849 RNA pseudouridylate synthase MWH06_00645 PF01479 S4 domain MWH06_00655 PF00162 Phosphoglycerate kinase MWH06_00660 PF10502 Signal peptidase, peptidase S26 MWH06_00665 PF00012 Hsp70 protein MWH06_00670 PF07743 HSCB C-terminal oligomerisation domain MWH06_00675 PF01521 Iron-sulphur cluster biosynthesis MWH06_00680 PF01592 NifU-like N terminal domain MWH06_00685 PF00448 SRP54-type protein, GTPase domain MWH06_00685 PF02881 SRP54-type protein, helical bundle domain MWH06_00690 PF18073 Rubredoxin metal binding domain MWH06_00715 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_00720 PF10417 C-terminal domain of 1-Cys peroxiredoxin MWH06_00720 PF00578 AhpC/TSA family MWH06_00735 PF03144 Elongation factor Tu domain 2 MWH06_00735 PF00009 Elongation factor Tu GTP binding domain MWH06_00735 PF00679 Elongation factor G C-terminus MWH06_00740 PF00156 Phosphoribosyl transferase domain MWH06_00745 PF00375 Sodium:dicarboxylate symporter family MWH06_00760 PF01979 Amidohydrolase family MWH06_00770 PF01578 Cytochrome C assembly protein MWH06_00770 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MWH06_00775 PF02355 Protein export membrane protein MWH06_00775 PF07549 SecD/SecF GG Motif MWH06_00790 PF00885 6,7-dimethyl-8-ribityllumazine synthase MWH06_00795 PF01029 NusB family MWH06_00800 PF00692 dUTPase MWH06_00805 PF01571 Aminomethyltransferase folate-binding domain MWH06_00810 PF00166 Chaperonin 10 Kd subunit MWH06_00815 PF00118 TCP-1/cpn60 chaperonin family MWH06_00825 PF01235 Sodium:alanine symporter family MWH06_00845 PF03023 Lipid II flippase MurJ MWH06_00855 PF04860 Phage portal protein MWH06_00865 PF03099 Biotin/lipoate A/B protein ligase family MWH06_00870 PF02016 LD-carboxypeptidase N-terminal domain MWH06_00870 PF17676 LD-carboxypeptidase C-terminal domain MWH06_00875 PF00266 Aminotransferase class-V MWH06_00890 PF00263 Bacterial type II and III secretion system protein MWH06_00890 PF03958 Bacterial type II/III secretion system short domain MWH06_00900 PF04055 Radical SAM superfamily MWH06_00900 PF00919 Uncharacterized protein family UPF0004 MWH06_00910 PF13505 Outer membrane protein beta-barrel domain MWH06_00940 PF01541 GIY-YIG catalytic domain MWH06_00990 PF00462 Glutaredoxin MWH06_00995 PF06574 FAD synthetase MWH06_00995 PF01687 Riboflavin kinase MWH06_01000 PF01252 Signal peptidase (SPase) II MWH06_01005 PF00675 Insulinase (Peptidase family M16) MWH06_01005 PF05193 Peptidase M16 inactive domain MWH06_01015 PF00551 Formyl transferase MWH06_01035 PF01668 SmpB protein MWH06_01040 PF01790 Prolipoprotein diacylglyceryl transferase MWH06_01055 PF17864 RuvB AAA lid domain MWH06_01055 PF05496 Holliday junction DNA helicase RuvB P-loop domain MWH06_01055 PF05491 RuvB C-terminal winged helix domain MWH06_01060 PF02245 Methylpurine-DNA glycosylase (MPG) MWH06_01065 PF00156 Phosphoribosyl transferase domain MWH06_01065 PF13537 Glutamine amidotransferase domain MWH06_01070 PF01098 Cell cycle protein MWH06_01075 PF00361 Proton-conducting membrane transporter MWH06_01095 PF01351 Ribonuclease HII MWH06_01100 PF00953 Glycosyl transferase family 4 MWH06_01110 PF01527 Transposase MWH06_01135 PF03100 CcmE MWH06_01140 PF03099 Biotin/lipoate A/B protein ligase family MWH06_01140 PF08279 HTH domain MWH06_01140 PF02237 Biotin protein ligase C terminal domain MWH06_01145 PF00361 Proton-conducting membrane transporter MWH06_01150 PF00361 Proton-conducting membrane transporter MWH06_01155 PF00361 Proton-conducting membrane transporter MWH06_01155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MWH06_01160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MWH06_01165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MWH06_01175 PF13361 UvrD-like helicase C-terminal domain MWH06_01175 PF00580 UvrD/REP helicase N-terminal domain MWH06_01200 PF02899 Phage integrase, N-terminal SAM-like domain MWH06_01200 PF00589 Phage integrase family MWH06_01205 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_01205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MWH06_01210 PF13360 PQQ-like domain MWH06_01210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MWH06_01215 PF00183 Hsp90 protein MWH06_01225 PF00155 Aminotransferase class I and II MWH06_01235 PF09285 Elongation factor P, C-terminal MWH06_01235 PF08207 Elongation factor P (EF-P) KOW-like domain MWH06_01235 PF01132 Elongation factor P (EF-P) OB domain MWH06_01240 PF01782 RimM N-terminal domain MWH06_01240 PF05239 PRC-barrel domain MWH06_01260 PF01609 Transposase DDE domain MWH06_01295 PF01545 Cation efflux family MWH06_01305 PF02660 Glycerol-3-phosphate acyltransferase MWH06_01310 PF01235 Sodium:alanine symporter family MWH06_01330 PF01066 CDP-alcohol phosphatidyltransferase MWH06_01335 PF02666 Phosphatidylserine decarboxylase MWH06_01340 PF00154 recA bacterial DNA recombination protein MWH06_01345 PF01416 tRNA pseudouridine synthase MWH06_01350 PF02768 DNA polymerase III beta subunit, C-terminal domain MWH06_01350 PF02767 DNA polymerase III beta subunit, central domain MWH06_01350 PF00712 DNA polymerase III beta subunit, N-terminal domain MWH06_01360 PF04545 Sigma-70, region 4 MWH06_01360 PF04542 Sigma-70 region 2 MWH06_01360 PF00140 Sigma-70 factor, region 1.2 MWH06_01365 PF01678 Diaminopimelate epimerase MWH06_01370 PF00881 Nitroreductase family MWH06_01375 PF02632 BioY family MWH06_01395 PF03989 DNA gyrase C-terminal domain, beta-propeller MWH06_01395 PF00521 DNA gyrase/topoisomerase IV, subunit A MWH06_01400 PF00355 Rieske [2Fe-2S] domain MWH06_01400 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MWH06_01405 PF00270 DEAD/DEAH box helicase MWH06_01405 PF00271 Helicase conserved C-terminal domain MWH06_01405 PF17764 3′ DNA-binding domain (3′BD) MWH06_01405 PF18074 Primosomal protein N C-terminal domain MWH06_01405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MWH06_01430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MWH06_01430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MWH06_01435 PF00675 Insulinase (Peptidase family M16) MWH06_01435 PF05193 Peptidase M16 inactive domain MWH06_01445 PF01702 Queuine tRNA-ribosyltransferase MWH06_01470 PF00486 Transcriptional regulatory protein, C terminal MWH06_01470 PF00072 Response regulator receiver domain MWH06_01475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MWH06_01475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MWH06_01495 PF13085 2Fe-2S iron-sulfur cluster binding domain MWH06_01500 PF02130 Uncharacterized protein family UPF0054 MWH06_01510 PF00091 Tubulin/FtsZ family, GTPase domain MWH06_01510 PF12327 FtsZ family, C-terminal domain MWH06_01520 PF13335 Magnesium chelatase, subunit ChlI C-terminal MWH06_01520 PF01078 Magnesium chelatase, subunit ChlI MWH06_01530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_01550 PF00665 Integrase core domain MWH06_01550 PF13333 Integrase core domain MWH06_01550 PF13276 HTH-like domain MWH06_01575 PF00011 Hsp20/alpha crystallin family MWH06_01585 PF13276 HTH-like domain MWH06_01585 PF00665 Integrase core domain MWH06_01585 PF13333 Integrase core domain MWH06_01615 PF01131 DNA topoisomerase MWH06_01615 PF01396 Topoisomerase DNA binding C4 zinc finger MWH06_01615 PF13368 Topoisomerase C-terminal repeat MWH06_01615 PF01751 Toprim domain MWH06_01635 PF02779 Transketolase, pyrimidine binding domain MWH06_01635 PF00364 Biotin-requiring enzyme MWH06_01635 PF02780 Transketolase, C-terminal domain MWH06_01650 PF03060 Nitronate monooxygenase MWH06_01665 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MWH06_01680 PF00665 Integrase core domain MWH06_01680 PF13276 HTH-like domain MWH06_01680 PF13333 Integrase core domain MWH06_01690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_01720 PF00665 Integrase core domain MWH06_01720 PF13276 HTH-like domain MWH06_01720 PF13333 Integrase core domain MWH06_01735 PF13276 HTH-like domain MWH06_01735 PF00665 Integrase core domain MWH06_01735 PF13333 Integrase core domain MWH06_01740 PF04002 RadC-like JAB domain MWH06_01760 PF13333 Integrase core domain MWH06_01760 PF00665 Integrase core domain MWH06_01760 PF13276 HTH-like domain MWH06_01785 PF13333 Integrase core domain MWH06_01785 PF00665 Integrase core domain MWH06_01785 PF13276 HTH-like domain MWH06_01830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MWH06_01835 PF01368 DHH family MWH06_01835 PF02272 DHHA1 domain MWH06_01835 PF17768 RecJ OB domain MWH06_01845 PF01842 ACT domain MWH06_01845 PF13840 ACT domain MWH06_01845 PF00696 Amino acid kinase family MWH06_01855 PF04002 RadC-like JAB domain MWH06_01885 PF00202 Aminotransferase class-III MWH06_01890 PF00571 CBS domain MWH06_01890 PF03471 Transporter associated domain MWH06_01890 PF01595 Cyclin M transmembrane N-terminal domain MWH06_01895 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) MWH06_01900 PF02441 Flavoprotein MWH06_01905 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MWH06_01905 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MWH06_01940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MWH06_01940 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MWH06_01940 PF02142 MGS-like domain MWH06_01955 PF03631 Virulence factor BrkB MWH06_01975 PF17762 HTH domain found in ParB protein MWH06_01975 PF02195 ParB-like nuclease domain MWH06_01980 PF13614 AAA domain MWH06_01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MWH06_01985 PF13188 PAS domain MWH06_01985 PF00512 His Kinase A (phospho-acceptor) domain MWH06_01985 PF00072 Response regulator receiver domain MWH06_01985 PF08448 PAS fold MWH06_01990 PF01218 Coproporphyrinogen III oxidase MWH06_02005 PF04452 RNA methyltransferase MWH06_02020 PF08442 ATP-grasp domain MWH06_02020 PF00549 CoA-ligase MWH06_02025 PF02629 CoA binding domain MWH06_02025 PF00549 CoA-ligase MWH06_02035 PF18324 Hypothetical protein TT1725 MWH06_02035 PF00180 Isocitrate/isopropylmalate dehydrogenase MWH06_02040 PF10576 Iron-sulfur binding domain of endonuclease III MWH06_02040 PF00633 Helix-hairpin-helix motif MWH06_02040 PF00730 HhH-GPD superfamily base excision DNA repair protein MWH06_02055 PF02511 Thymidylate synthase complementing protein MWH06_02060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MWH06_02070 PF00550 Phosphopantetheine attachment site MWH06_02075 PF00348 Polyprenyl synthetase MWH06_02085 PF00004 ATPase family associated with various cellular activities (AAA) MWH06_02085 PF07724 AAA domain (Cdc48 subfamily) MWH06_02085 PF10431 C-terminal, D2-small domain, of ClpB protein MWH06_02090 PF00227 Proteasome subunit MWH06_02115 PF00334 Nucleoside diphosphate kinase MWH06_02125 PF01040 UbiA prenyltransferase family MWH06_02130 PF02033 Ribosome-binding factor A MWH06_02140 PF00575 S1 RNA binding domain MWH06_02140 PF13184 NusA-like KH domain MWH06_02140 PF08529 NusA N-terminal domain MWH06_02145 PF00873 AcrB/AcrD/AcrF family MWH06_02155 PF00120 Glutamine synthetase, catalytic domain MWH06_02160 PF11638 DnaA N-terminal domain MWH06_02160 PF08299 Bacterial dnaA protein helix-turn-helix MWH06_02160 PF00308 Bacterial dnaA protein MWH06_02175 PF00925 GTP cyclohydrolase II MWH06_02180 PF04335 VirB8 protein MWH06_02195 PF00437 Type II/IV secretion system protein MWH06_02200 PF02534 Type IV secretory system Conjugative DNA transfer MWH06_02210 PF13847 Methyltransferase domain MWH06_02210 PF17827 PrmC N-terminal domain MWH06_02215 PF00814 Glycoprotease family MWH06_02220 PF00005 ABC transporter MWH06_02220 PF00664 ABC transporter transmembrane region MWH06_02245 PF00436 Single-strand binding protein family MWH06_02260 PF01653 NAD-dependent DNA ligase adenylation domain MWH06_02260 PF03120 NAD-dependent DNA ligase OB-fold domain MWH06_02260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MWH06_02260 PF12826 Helix-hairpin-helix motif MWH06_02260 PF00533 BRCA1 C Terminus (BRCT) domain MWH06_02275 PF00749 tRNA synthetases class I (E and Q), catalytic domain MWH06_02280 PF03918 Cytochrome C biogenesis protein MWH06_02290 PF00111 2Fe-2S iron-sulfur cluster binding domain MWH06_02335 PF04610 TrbL/VirB6 plasmid conjugal transfer protein MWH06_02345 PF04610 TrbL/VirB6 plasmid conjugal transfer protein MWH06_02350 PF04610 TrbL/VirB6 plasmid conjugal transfer protein MWH06_02355 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MWH06_02365 PF01921 tRNA synthetases class I (K) MWH06_02370 PF06271 RDD family MWH06_02380 PF03796 DnaB-like helicase C terminal domain MWH06_02380 PF00772 DnaB-like helicase N terminal domain MWH06_02395 PF09334 tRNA synthetases class I (M) MWH06_02395 PF08264 Anticodon-binding domain of tRNA MWH06_02400 PF08241 Methyltransferase domain MWH06_02405 PF08278 DNA primase DnaG DnaB-binding MWH06_02405 PF13662 Toprim domain MWH06_02405 PF08275 DNA primase catalytic core, N-terminal domain MWH06_02405 PF01807 CHC2 zinc finger MWH06_02405 PF10410 DnaB-helicase binding domain of primase MWH06_02420 PF00462 Glutaredoxin MWH06_02430 PF00390 Malic enzyme, N-terminal domain MWH06_02430 PF03949 Malic enzyme, NAD binding domain MWH06_02430 PF01515 Phosphate acetyl/butaryl transferase MWH06_02435 PF01066 CDP-alcohol phosphatidyltransferase MWH06_02455 PF01709 Transcriptional regulator MWH06_02485 PF00679 Elongation factor G C-terminus MWH06_02485 PF14492 Elongation Factor G, domain II MWH06_02485 PF00009 Elongation factor Tu GTP binding domain MWH06_02485 PF03144 Elongation factor Tu domain 2 MWH06_02485 PF06421 GTP-binding protein LepA C-terminus MWH06_02495 PF00005 ABC transporter MWH06_02500 PF02416 mttA/Hcf106 family MWH06_02510 PF06055 Exopolysaccharide synthesis, ExoD MWH06_02515 PF09190 DALR domain MWH06_02515 PF01406 tRNA synthetases class I (C) catalytic domain MWH06_02530 PF13333 Integrase core domain MWH06_02530 PF00665 Integrase core domain MWH06_02530 PF13276 HTH-like domain MWH06_02540 PF02575 YbaB/EbfC DNA-binding family MWH06_02545 PF12169 DNA polymerase III subunits gamma and tau domain III MWH06_02570 PF13462 Thioredoxin MWH06_02575 PF03364 Polyketide cyclase / dehydrase and lipid transport MWH06_02590 PF02875 Mur ligase family, glutamate ligase domain MWH06_02590 PF08245 Mur ligase middle domain MWH06_02610 PF00571 CBS domain MWH06_02610 PF03471 Transporter associated domain MWH06_02625 PF00586 AIR synthase related protein, N-terminal domain MWH06_02625 PF02769 AIR synthase related protein, C-terminal domain MWH06_02630 PF01259 SAICAR synthetase MWH06_02635 PF01746 tRNA (Guanine-1)-methyltransferase MWH06_02640 PF01245 Ribosomal protein L19 MWH06_02645 PF00528 Binding-protein-dependent transport system inner membrane component MWH06_02655 PF13276 HTH-like domain MWH06_02655 PF00665 Integrase core domain MWH06_02655 PF13333 Integrase core domain MWH06_02665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MWH06_02665 PF02542 YgbB family MWH06_02670 PF01594 AI-2E family transporter MWH06_02685 PF02899 Phage integrase, N-terminal SAM-like domain MWH06_02685 PF00589 Phage integrase family MWH06_02695 PF01649 Ribosomal protein S20 MWH06_02700 PF00285 Citrate synthase, C-terminal domain MWH06_02705 PF00596 Class II Aldolase and Adducin N-terminal domain MWH06_02715 PF00570 HRDC domain MWH06_02715 PF01612 3'-5' exonuclease MWH06_02725 PF01121 Dephospho-CoA kinase MWH06_02735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MWH06_02735 PF02222 ATP-grasp domain MWH06_02740 PF04379 ApaG domain MWH06_02765 PF00034 Cytochrome c MWH06_02770 PF07687 Peptidase dimerisation domain MWH06_02770 PF01546 Peptidase family M20/M25/M40 MWH06_02775 PF13685 Iron-containing alcohol dehydrogenase MWH06_02790 PF03948 Ribosomal protein L9, C-terminal domain MWH06_02790 PF01281 Ribosomal protein L9, N-terminal domain MWH06_02795 PF01084 Ribosomal protein S18 MWH06_02800 PF01250 Ribosomal protein S6 MWH06_02805 PF14579 Helix-hairpin-helix motif MWH06_02805 PF02811 PHP domain MWH06_02805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MWH06_02805 PF07733 Bacterial DNA polymerase III alpha NTPase domain MWH06_02820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MWH06_02820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MWH06_02820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MWH06_02820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MWH06_02835 PF01523 Putative modulator of DNA gyrase MWH06_02865 PF01367 5'-3' exonuclease, C-terminal SAM fold MWH06_02865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MWH06_02865 PF00476 DNA polymerase family A MWH06_02885 PF00033 Cytochrome b/b6/petB MWH06_02885 PF00032 Cytochrome b(C-terminal)/b6/petD MWH06_02885 PF02167 Cytochrome C1 family MWH06_02890 PF00032 Cytochrome b(C-terminal)/b6/petD MWH06_02890 PF00033 Cytochrome b/b6/petB MWH06_02895 PF00226 DnaJ domain MWH06_02895 PF01556 DnaJ C terminal domain MWH06_02895 PF00684 DnaJ central domain MWH06_02905 PF03129 Anticodon binding domain MWH06_02905 PF13393 Histidyl-tRNA synthetase MWH06_02910 PF01975 Survival protein SurE MWH06_02920 PF00448 SRP54-type protein, GTPase domain MWH06_02920 PF02881 SRP54-type protein, helical bundle domain MWH06_02920 PF02978 Signal peptide binding domain MWH06_02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_02940 PF07977 FabA-like domain MWH06_02950 PF07244 Surface antigen variable number repeat MWH06_02950 PF01103 Surface antigen MWH06_02955 PF02163 Peptidase family M50 MWH06_02955 PF17820 PDZ domain MWH06_02970 PF00216 Bacterial DNA-binding protein MWH06_02975 PF00575 S1 RNA binding domain MWH06_03000 PF00186 Dihydrofolate reductase MWH06_03005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MWH06_03005 PF00809 Pterin binding enzyme MWH06_03015 PF03070 TENA/THI-4/PQQC family MWH06_03025 PF00085 Thioredoxin MWH06_03050 PF01609 Transposase DDE domain MWH06_03060 PF02661 Fic/DOC family MWH06_03060 PF13784 Fic/DOC family N-terminal MWH06_03090 PF00107 Zinc-binding dehydrogenase MWH06_03090 PF08240 Alcohol dehydrogenase GroES-like domain MWH06_03095 PF02401 LytB protein MWH06_03100 PF00905 Penicillin binding protein transpeptidase domain MWH06_03100 PF03793 PASTA domain MWH06_03100 PF03717 Penicillin-binding Protein dimerisation domain MWH06_03125 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_03130 PF09312 SurA N-terminal domain MWH06_03130 PF00639 PPIC-type PPIASE domain MWH06_03140 PF00719 Inorganic pyrophosphatase MWH06_03155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_03180 PF00677 Lumazine binding domain MWH06_03190 PF01541 GIY-YIG catalytic domain MWH06_03190 PF02151 UvrB/uvrC motif MWH06_03190 PF08459 UvrC Helix-hairpin-helix N-terminal MWH06_03195 PF01541 GIY-YIG catalytic domain MWH06_03195 PF02151 UvrB/uvrC motif MWH06_03195 PF08459 UvrC Helix-hairpin-helix N-terminal MWH06_03200 PF05746 DALR anticodon binding domain MWH06_03200 PF02092 Glycyl-tRNA synthetase beta subunit MWH06_03205 PF02091 Glycyl-tRNA synthetase alpha subunit MWH06_03215 PF00490 Delta-aminolevulinic acid dehydratase MWH06_03220 PF00146 NADH dehydrogenase MWH06_03235 PF00883 Cytosol aminopeptidase family, catalytic domain MWH06_03235 PF02789 Cytosol aminopeptidase family, N-terminal domain MWH06_03250 PF00171 Aldehyde dehydrogenase family MWH06_03250 PF01619 Proline dehydrogenase MWH06_03250 PF14850 DNA-binding domain of Proline dehydrogenase MWH06_03250 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MWH06_03255 PF00330 Aconitase family (aconitate hydratase) MWH06_03255 PF00694 Aconitase C-terminal domain MWH06_03265 PF02556 Preprotein translocase subunit SecB MWH06_03275 PF00929 Exonuclease MWH06_03280 PF02630 SCO1/SenC MWH06_03285 PF01751 Toprim domain MWH06_03285 PF00986 DNA gyrase B subunit, carboxyl terminus MWH06_03285 PF00204 DNA gyrase B MWH06_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MWH06_03305 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_03305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MWH06_03315 PF03033 Glycosyltransferase family 28 N-terminal domain MWH06_03315 PF04101 Glycosyltransferase family 28 C-terminal domain MWH06_03320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_03330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MWH06_03330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MWH06_03335 PF04972 BON domain MWH06_03345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MWH06_03345 PF05698 Bacterial trigger factor protein (TF) C-terminus MWH06_03345 PF05697 Bacterial trigger factor protein (TF) MWH06_03355 PF07724 AAA domain (Cdc48 subfamily) MWH06_03355 PF10431 C-terminal, D2-small domain, of ClpB protein MWH06_03355 PF06689 ClpX C4-type zinc finger MWH06_03360 PF02190 ATP-dependent protease La (LON) substrate-binding domain MWH06_03360 PF00004 ATPase family associated with various cellular activities (AAA) MWH06_03360 PF05362 Lon protease (S16) C-terminal proteolytic domain MWH06_03365 PF00664 ABC transporter transmembrane region MWH06_03365 PF00005 ABC transporter MWH06_03385 PF00115 Cytochrome C and Quinol oxidase polypeptide I MWH06_03400 PF00210 Ferritin-like domain MWH06_03410 PF00999 Sodium/hydrogen exchanger family MWH06_03410 PF02254 TrkA-N domain MWH06_03420 PF02223 Thymidylate kinase MWH06_03435 PF08338 Domain of unknown function (DUF1731) MWH06_03435 PF01370 NAD dependent epimerase/dehydratase family MWH06_03440 PF01225 Mur ligase family, catalytic domain MWH06_03440 PF02875 Mur ligase family, glutamate ligase domain MWH06_03440 PF08245 Mur ligase middle domain MWH06_03450 PF01230 HIT domain MWH06_03455 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MWH06_03460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MWH06_03465 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MWH06_03470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MWH06_03470 PF00056 lactate/malate dehydrogenase, NAD binding domain MWH06_03475 PF01026 TatD related DNase MWH06_03480 PF00293 NUDIX domain MWH06_03500 PF00579 tRNA synthetases class I (W and Y) MWH06_03525 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MWH06_03530 PF01027 Inhibitor of apoptosis-promoting Bax1 MWH06_03535 PF00588 SpoU rRNA Methylase family MWH06_03535 PF08032 RNA 2'-O ribose methyltransferase substrate binding MWH06_03545 PF11953 Domain of unknown function (DUF3470) MWH06_03545 PF00037 4Fe-4S binding domain MWH06_03550 PF17782 DprA winged helix domain MWH06_03550 PF02481 DNA recombination-mediator protein A MWH06_03555 PF00121 Triosephosphate isomerase MWH06_03565 PF00398 Ribosomal RNA adenine dimethylase MWH06_03570 PF00478 IMP dehydrogenase / GMP reductase domain MWH06_03570 PF00571 CBS domain MWH06_03575 PF00923 Transaldolase/Fructose-6-phosphate aldolase MWH06_03580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MWH06_03585 PF02874 ATP synthase alpha/beta family, beta-barrel domain MWH06_03585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MWH06_03590 PF00528 Binding-protein-dependent transport system inner membrane component MWH06_03595 PF00468 Ribosomal protein L34 MWH06_03620 PF01209 ubiE/COQ5 methyltransferase family MWH06_03625 PF00317 Ribonucleotide reductase, all-alpha domain MWH06_03625 PF03477 ATP cone domain MWH06_03625 PF02867 Ribonucleotide reductase, barrel domain MWH06_03630 PF02272 DHHA1 domain MWH06_03630 PF01411 tRNA synthetases class II (A) MWH06_03630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MWH06_03640 PF01632 Ribosomal protein L35 MWH06_03645 PF00453 Ribosomal protein L20 MWH06_03650 PF02911 Formyl transferase, C-terminal domain MWH06_03650 PF00551 Formyl transferase MWH06_03655 PF01808 AICARFT/IMPCHase bienzyme MWH06_03655 PF02142 MGS-like domain MWH06_03665 PF00749 tRNA synthetases class I (E and Q), catalytic domain MWH06_03675 PF01078 Magnesium chelatase, subunit ChlI MWH06_03675 PF13335 Magnesium chelatase, subunit ChlI C-terminal MWH06_03690 PF04002 RadC-like JAB domain MWH06_03780 PF01381 Helix-turn-helix MWH06_03785 PF04002 RadC-like JAB domain MWH06_03795 PF01381 Helix-turn-helix MWH06_03855 PF17482 Phage tail sheath C-terminal domain MWH06_03855 PF04984 Phage tail sheath protein subtilisin-like domain MWH06_03950 PF01555 DNA methylase MWH06_03995 PF01548 Transposase MWH06_03995 PF02371 Transposase IS116/IS110/IS902 family MWH06_04075 PF01654 Cytochrome bd terminal oxidase subunit I MWH06_04090 PF12796 Ankyrin repeats (3 copies) MWH06_04110 PF04002 RadC-like JAB domain MWH06_04120 PF01381 Helix-turn-helix MWH06_04120 PF08671 Anti-repressor SinI MWH06_04135 PF01734 Patatin-like phospholipase MWH06_04140 PF13091 PLD-like domain MWH06_04190 PF17482 Phage tail sheath C-terminal domain MWH06_04190 PF04984 Phage tail sheath protein subtilisin-like domain MWH06_04350 PF00004 ATPase family associated with various cellular activities (AAA) MWH06_04350 PF07724 AAA domain (Cdc48 subfamily) MWH06_04350 PF17871 AAA lid domain MWH06_04350 PF02861 Clp amino terminal domain, pathogenicity island component MWH06_04350 PF10431 C-terminal, D2-small domain, of ClpB protein MWH06_04365 PF00072 Response regulator receiver domain MWH06_04365 PF00990 Diguanylate cyclase, GGDEF domain MWH06_04370 PF02565 Recombination protein O C terminal MWH06_04370 PF11967 Recombination protein O N terminal MWH06_04395 PF00268 Ribonucleotide reductase, small chain MWH06_04405 PF13276 HTH-like domain MWH06_04405 PF00665 Integrase core domain MWH06_04405 PF13333 Integrase core domain MWH06_04425 PF00814 Glycoprotease family MWH06_04465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MWH06_04465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MWH06_04465 PF13288 DXP reductoisomerase C-terminal domain MWH06_04485 PF10609 NUBPL iron-transfer P-loop NTPase MWH06_04490 PF01494 FAD binding domain MWH06_04520 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MWH06_04530 PF00483 Nucleotidyl transferase MWH06_04530 PF01050 Mannose-6-phosphate isomerase MWH06_04535 PF02687 FtsX-like permease family MWH06_04535 PF12704 MacB-like periplasmic core domain MWH06_04550 PF00231 ATP synthase MWH06_04555 PF01523 Putative modulator of DNA gyrase MWH06_04560 PF00313 'Cold-shock' DNA-binding domain MWH06_04565 PF00270 DEAD/DEAH box helicase MWH06_04565 PF00271 Helicase conserved C-terminal domain MWH06_04575 PF00004 ATPase family associated with various cellular activities (AAA) MWH06_04575 PF07724 AAA domain (Cdc48 subfamily) MWH06_04575 PF17871 AAA lid domain MWH06_04575 PF02861 Clp amino terminal domain, pathogenicity island component MWH06_04575 PF10431 C-terminal, D2-small domain, of ClpB protein MWH06_04580 PF01791 DeoC/LacD family aldolase MWH06_04590 PF01180 Dihydroorotate dehydrogenase MWH06_04595 PF14622 Ribonuclease-III-like MWH06_04595 PF00035 Double-stranded RNA binding motif MWH06_04640 PF02779 Transketolase, pyrimidine binding domain MWH06_04640 PF16870 2-oxoglutarate dehydrogenase C-terminal MWH06_04640 PF00676 Dehydrogenase E1 component MWH06_04640 PF16078 2-oxoglutarate dehydrogenase N-terminus MWH06_04645 PF00226 DnaJ domain MWH06_04645 PF00684 DnaJ central domain MWH06_04645 PF01556 DnaJ C terminal domain MWH06_04655 PF08676 MutL C terminal dimerisation domain MWH06_04655 PF01119 DNA mismatch repair protein, C-terminal domain MWH06_04660 PF00731 AIR carboxylase MWH06_04670 PF01192 RNA polymerase Rpb6 MWH06_04680 PF03334 Na+/H+ antiporter subunit MWH06_04685 PF13244 Domain of unknown function (DUF4040) MWH06_04685 PF00361 Proton-conducting membrane transporter MWH06_04685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MWH06_04695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MWH06_04700 PF04545 Sigma-70, region 4 MWH06_04700 PF03979 Sigma-70 factor, region 1.1 MWH06_04700 PF00140 Sigma-70 factor, region 1.2 MWH06_04700 PF04542 Sigma-70 region 2 MWH06_04700 PF04539 Sigma-70 region 3 MWH06_04700 PF04546 Sigma-70, non-essential region MWH06_04725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MWH06_04725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MWH06_04735 PF07497 Rho termination factor, RNA-binding domain MWH06_04735 PF07498 Rho termination factor, N-terminal domain MWH06_04735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MWH06_04745 PF00639 PPIC-type PPIASE domain MWH06_04750 PF00886 Ribosomal protein S16 MWH06_04755 PF00348 Polyprenyl synthetase MWH06_04760 PF01025 GrpE MWH06_04765 PF00579 tRNA synthetases class I (W and Y) MWH06_04785 PF00117 Glutamine amidotransferase class-I MWH06_04785 PF06418 CTP synthase N-terminus MWH06_04790 PF14437 MafB19-like deaminase MWH06_04800 PF00083 Sugar (and other) transporter MWH06_04800 PF07690 Major Facilitator Superfamily MWH06_04810 PF08264 Anticodon-binding domain of tRNA MWH06_04810 PF00133 tRNA synthetases class I (I, L, M and V) MWH06_04825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MWH06_04845 PF01609 Transposase DDE domain MWH06_04865 PF00005 ABC transporter MWH06_04870 PF01113 Dihydrodipicolinate reductase, N-terminus MWH06_04870 PF05173 Dihydrodipicolinate reductase, C-terminus MWH06_04880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_04910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MWH06_04910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MWH06_04915 PF00902 Sec-independent protein translocase protein (TatC) MWH06_04930 PF00075 RNase H MWH06_04935 PF01040 UbiA prenyltransferase family MWH06_04940 PF00115 Cytochrome C and Quinol oxidase polypeptide I MWH06_04945 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MWH06_04945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MWH06_04955 PF07690 Major Facilitator Superfamily MWH06_04990 PF00692 dUTPase MWH06_05005 PF02386 Cation transport protein MWH06_05010 PF00571 CBS domain MWH06_05010 PF01769 Divalent cation transporter MWH06_05010 PF03448 MgtE intracellular N domain MWH06_05025 PF00893 Small Multidrug Resistance protein MWH06_05030 PF00893 Small Multidrug Resistance protein MWH06_05035 PF07943 Penicillin-binding protein 5, C-terminal domain MWH06_05035 PF00768 D-alanyl-D-alanine carboxypeptidase MWH06_05045 PF04002 RadC-like JAB domain MWH06_05050 PF12705 PD-(D/E)XK nuclease superfamily MWH06_05050 PF00580 UvrD/REP helicase N-terminal domain MWH06_05050 PF13361 UvrD-like helicase C-terminal domain MWH06_05055 PF00288 GHMP kinases N terminal domain MWH06_05055 PF08544 GHMP kinases C terminal MWH06_05065 PF00950 ABC 3 transport family MWH06_05085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_05105 PF01743 Poly A polymerase head domain MWH06_05105 PF12627 Probable RNA and SrmB- binding site of polymerase A MWH06_05105 PF13735 tRNA nucleotidyltransferase domain 2 putative MWH06_05115 PF01926 50S ribosome-binding GTPase MWH06_05115 PF06071 Protein of unknown function (DUF933) MWH06_05130 PF00625 Guanylate kinase MWH06_05160 PF00890 FAD binding domain MWH06_05160 PF02910 Fumarate reductase flavoprotein C-term MWH06_05165 PF14572 Phosphoribosyl synthetase-associated domain MWH06_05165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MWH06_05170 PF02686 Glu-tRNAGln amidotransferase C subunit MWH06_05180 PF00117 Glutamine amidotransferase class-I MWH06_05180 PF02540 NAD synthase MWH06_05180 PF00958 GMP synthase C terminal domain MWH06_05205 PF00488 MutS domain V MWH06_05205 PF05190 MutS family domain IV MWH06_05205 PF01624 MutS domain I MWH06_05205 PF05188 MutS domain II MWH06_05205 PF05192 MutS domain III MWH06_05215 PF13784 Fic/DOC family N-terminal MWH06_05215 PF02661 Fic/DOC family MWH06_05230 PF07478 D-ala D-ala ligase C-terminus MWH06_05230 PF01820 D-ala D-ala ligase N-terminus MWH06_05235 PF03799 Cell division protein FtsQ MWH06_05235 PF08478 POTRA domain, FtsQ-type MWH06_05245 PF01565 FAD binding domain MWH06_05245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MWH06_05250 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MWH06_05250 PF03900 Porphobilinogen deaminase, C-terminal domain MWH06_05265 PF02355 Protein export membrane protein MWH06_05300 PF00557 Metallopeptidase family M24 MWH06_05300 PF01321 Creatinase/Prolidase N-terminal domain MWH06_05305 PF01134 Glucose inhibited division protein A MWH06_05305 PF13932 GidA associated domain MWH06_05355 PF02810 SEC-C motif MWH06_05355 PF07517 SecA DEAD-like domain MWH06_05355 PF01043 SecA preprotein cross-linking domain MWH06_05355 PF07516 SecA Wing and Scaffold domain MWH06_05410 PF01609 Transposase DDE domain MWH06_05415 PF02817 e3 binding domain MWH06_05415 PF00364 Biotin-requiring enzyme MWH06_05415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MWH06_05420 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MWH06_05430 PF00380 Ribosomal protein S9/S16 MWH06_05435 PF00572 Ribosomal protein L13 MWH06_05445 PF10691 Protein of unknown function (DUF2497) MWH06_05450 PF01728 FtsJ-like methyltransferase MWH06_05470 PF13333 Integrase core domain MWH06_05470 PF00665 Integrase core domain MWH06_05470 PF13276 HTH-like domain MWH06_05490 PF13333 Integrase core domain MWH06_05490 PF00665 Integrase core domain MWH06_05490 PF13276 HTH-like domain MWH06_05560 PF00011 Hsp20/alpha crystallin family MWH06_05590 PF13333 Integrase core domain MWH06_05590 PF00665 Integrase core domain MWH06_05590 PF13276 HTH-like domain MWH06_05615 PF00665 Integrase core domain MWH06_05615 PF13276 HTH-like domain MWH06_05615 PF13333 Integrase core domain MWH06_05650 PF00664 ABC transporter transmembrane region MWH06_05650 PF00005 ABC transporter MWH06_05660 PF03485 Arginyl tRNA synthetase N terminal domain MWH06_05660 PF05746 DALR anticodon binding domain MWH06_05660 PF00750 tRNA synthetases class I (R) MWH06_05690 PF01098 Cell cycle protein MWH06_05695 PF01209 ubiE/COQ5 methyltransferase family MWH06_05700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MWH06_05700 PF04055 Radical SAM superfamily MWH06_05705 PF00830 Ribosomal L28 family MWH06_05725 PF00163 Ribosomal protein S4/S9 N-terminal domain MWH06_05725 PF01479 S4 domain MWH06_05730 PF02779 Transketolase, pyrimidine binding domain MWH06_05730 PF00456 Transketolase, thiamine diphosphate binding domain MWH06_05730 PF02780 Transketolase, C-terminal domain MWH06_05745 PF00696 Amino acid kinase family MWH06_05750 PF01926 50S ribosome-binding GTPase MWH06_05755 PF00472 RF-1 domain MWH06_05755 PF03462 PCRF domain MWH06_05760 PF01636 Phosphotransferase enzyme family MWH06_05765 PF01609 Transposase DDE domain MWH06_05795 PF03167 Uracil DNA glycosylase superfamily MWH06_05800 PF01327 Polypeptide deformylase MWH06_05805 PF02491 SHS2 domain inserted in FTSA MWH06_05820 PF00557 Metallopeptidase family M24 MWH06_05825 PF00083 Sugar (and other) transporter MWH06_05825 PF07690 Major Facilitator Superfamily MWH06_05830 PF01795 MraW methylase family MWH06_05845 PF01386 Ribosomal L25p family MWH06_05845 PF14693 Ribosomal protein TL5, C-terminal domain MWH06_05850 PF01195 Peptidyl-tRNA hydrolase MWH06_05880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_05905 PF00444 Ribosomal protein L36 MWH06_05910 PF03618 Kinase/pyrophosphorylase MWH06_05915 PF01578 Cytochrome C assembly protein MWH06_05925 PF00709 Adenylosuccinate synthetase MWH06_05940 PF01176 Translation initiation factor 1A / IF-1 MWH06_05945 PF02545 Maf-like protein MWH06_05955 PF07676 WD40-like Beta Propeller Repeat MWH06_05955 PF04052 TolB amino-terminal domain MWH06_05960 PF12706 Beta-lactamase superfamily domain MWH06_05960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MWH06_05960 PF17770 Ribonuclease J C-terminal domain MWH06_05965 PF01556 DnaJ C terminal domain MWH06_05965 PF00684 DnaJ central domain MWH06_05965 PF00226 DnaJ domain MWH06_05990 PF00529 HlyD membrane-fusion protein of T1SS MWH06_05990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MWH06_06010 PF00925 GTP cyclohydrolase II MWH06_06010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MWH06_06015 PF03449 Transcription elongation factor, N-terminal MWH06_06015 PF01272 Transcription elongation factor, GreA/GreB, C-term MWH06_06020 PF02874 ATP synthase alpha/beta family, beta-barrel domain MWH06_06020 PF00306 ATP synthase alpha/beta chain, C terminal domain MWH06_06020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MWH06_06025 PF00213 ATP synthase delta (OSCP) subunit MWH06_06030 PF02021 Uncharacterised protein family UPF0102 MWH06_06035 PF01196 Ribosomal protein L17 MWH06_06050 PF00416 Ribosomal protein S13/S18 MWH06_06060 PF00344 SecY translocase MWH06_06065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MWH06_06070 PF03719 Ribosomal protein S5, C-terminal domain MWH06_06070 PF00333 Ribosomal protein S5, N-terminal domain MWH06_06075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MWH06_06080 PF00347 Ribosomal protein L6 MWH06_06085 PF00410 Ribosomal protein S8 MWH06_06090 PF00253 Ribosomal protein S14p/S29e MWH06_06095 PF00281 Ribosomal protein L5 MWH06_06095 PF00673 ribosomal L5P family C-terminus MWH06_06100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MWH06_06105 PF00238 Ribosomal protein L14p/L23e MWH06_06110 PF00366 Ribosomal protein S17 MWH06_06115 PF00831 Ribosomal L29 protein MWH06_06120 PF00252 Ribosomal protein L16p/L10e MWH06_06130 PF00237 Ribosomal protein L22p/L17e MWH06_06135 PF00203 Ribosomal protein S19 MWH06_06140 PF00181 Ribosomal Proteins L2, RNA binding domain MWH06_06140 PF03947 Ribosomal Proteins L2, C-terminal domain MWH06_06145 PF00276 Ribosomal protein L23 MWH06_06150 PF00573 Ribosomal protein L4/L1 family MWH06_06155 PF00297 Ribosomal protein L3 MWH06_06160 PF00338 Ribosomal protein S10p/S20e MWH06_06165 PF00009 Elongation factor Tu GTP binding domain MWH06_06165 PF03143 Elongation factor Tu C-terminal domain MWH06_06165 PF03144 Elongation factor Tu domain 2 MWH06_06180 PF00117 Glutamine amidotransferase class-I MWH06_06180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MWH06_06205 PF00989 PAS fold MWH06_06205 PF00512 His Kinase A (phospho-acceptor) domain MWH06_06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MWH06_06210 PF00202 Aminotransferase class-III MWH06_06215 PF01609 Transposase DDE domain MWH06_06240 PF13340 Putative transposase of IS4/5 family (DUF4096) MWH06_06245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MWH06_06245 PF10531 SLBB domain MWH06_06245 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MWH06_06250 PF05198 Translation initiation factor IF-3, N-terminal domain MWH06_06250 PF00707 Translation initiation factor IF-3, C-terminal domain MWH06_06255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MWH06_06255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MWH06_06255 PF03129 Anticodon binding domain MWH06_06260 PF12838 4Fe-4S dicluster domain MWH06_06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase MWH06_06280 PF04002 RadC-like JAB domain MWH06_06325 PF01513 ATP-NAD kinase MWH06_06330 PF01197 Ribosomal protein L31 MWH06_06335 PF00698 Acyl transferase domain MWH06_06350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MWH06_06350 PF01676 Metalloenzyme superfamily MWH06_06365 PF01425 Amidase MWH06_06385 PF02769 AIR synthase related protein, C-terminal domain MWH06_06385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MWH06_06385 PF00586 AIR synthase related protein, N-terminal domain MWH06_06395 PF17760 UvrA interaction domain MWH06_06395 PF17755 UvrA DNA-binding domain MWH06_06420 PF02875 Mur ligase family, glutamate ligase domain MWH06_06420 PF08245 Mur ligase middle domain MWH06_06425 PF01053 Cys/Met metabolism PLP-dependent enzyme MWH06_06435 PF00012 Hsp70 protein MWH06_06440 PF00575 S1 RNA binding domain MWH06_06440 PF12111 Polyribonucleotide phosphorylase C terminal MWH06_06440 PF10150 Ribonuclease E/G family MWH06_06445 PF00471 Ribosomal protein L33 MWH06_06460 PF00005 ABC transporter MWH06_06470 PF01258 Prokaryotic dksA/traR C4-type zinc finger MWH06_06520 PF01145 SPFH domain / Band 7 family MWH06_06525 PF01145 SPFH domain / Band 7 family MWH06_06530 PF13180 PDZ domain MWH06_06540 PF01653 NAD-dependent DNA ligase adenylation domain MWH06_06540 PF00533 BRCA1 C Terminus (BRCT) domain MWH06_06540 PF12826 Helix-hairpin-helix motif MWH06_06540 PF03120 NAD-dependent DNA ligase OB-fold domain MWH06_06700 PF04984 Phage tail sheath protein subtilisin-like domain MWH06_06700 PF17482 Phage tail sheath C-terminal domain MWH06_06755 PF18073 Rubredoxin metal binding domain MWH06_06830 PF06250 YhcG PDDEXK nuclease domain MWH06_06830 PF17761 DUF1016 N-terminal domain MWH06_06865 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_06880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MWH06_06880 PF01588 Putative tRNA binding domain MWH06_06880 PF03147 Ferredoxin-fold anticodon binding domain MWH06_06880 PF03484 tRNA synthetase B5 domain MWH06_06880 PF03483 B3/4 domain MWH06_06895 PF00919 Uncharacterized protein family UPF0004 MWH06_06895 PF01938 TRAM domain MWH06_06895 PF04055 Radical SAM superfamily MWH06_06900 PF03653 Uncharacterised protein family (UPF0093) MWH06_06905 PF00676 Dehydrogenase E1 component MWH06_06910 PF13276 HTH-like domain MWH06_06910 PF00665 Integrase core domain MWH06_06910 PF13333 Integrase core domain MWH06_06925 PF01609 Transposase DDE domain MWH06_06940 PF02817 e3 binding domain MWH06_06940 PF00364 Biotin-requiring enzyme MWH06_06940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MWH06_06960 PF13662 Toprim domain MWH06_06960 PF02132 RecR protein MWH06_07065 PF01555 DNA methylase MWH06_07180 PF17482 Phage tail sheath C-terminal domain MWH06_07180 PF04984 Phage tail sheath protein subtilisin-like domain MWH06_07225 PF13091 PLD-like domain MWH06_07240 PF08671 Anti-repressor SinI MWH06_07240 PF01381 Helix-turn-helix MWH06_07250 PF04002 RadC-like JAB domain MWH06_07260 PF01119 DNA mismatch repair protein, C-terminal domain MWH06_07260 PF08676 MutL C terminal dimerisation domain MWH06_07270 PF12804 MobA-like NTP transferase domain MWH06_07270 PF00132 Bacterial transferase hexapeptide (six repeats) MWH06_07270 PF14602 Hexapeptide repeat of succinyl-transferase MWH06_07275 PF16363 GDP-mannose 4,6 dehydratase MWH06_07295 PF00664 ABC transporter transmembrane region MWH06_07295 PF00005 ABC transporter MWH06_07300 PF01212 Beta-eliminating lyase MWH06_07305 PF01212 Beta-eliminating lyase MWH06_07315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MWH06_07315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MWH06_07315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MWH06_07320 PF00892 EamA-like transporter family MWH06_07360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_07375 PF02637 GatB domain MWH06_07375 PF02934 GatB/GatE catalytic domain MWH06_07385 PF03652 Holliday junction resolvase MWH06_07390 PF02075 Crossover junction endodeoxyribonuclease RuvC MWH06_07395 PF00510 Cytochrome c oxidase subunit III MWH06_07420 PF02773 S-adenosylmethionine synthetase, C-terminal domain MWH06_07420 PF02772 S-adenosylmethionine synthetase, central domain MWH06_07420 PF00438 S-adenosylmethionine synthetase, N-terminal domain MWH06_07430 PF01016 Ribosomal L27 protein MWH06_07435 PF00829 Ribosomal prokaryotic L21 protein MWH06_07445 PF00132 Bacterial transferase hexapeptide (six repeats) MWH06_07445 PF14602 Hexapeptide repeat of succinyl-transferase MWH06_07445 PF12804 MobA-like NTP transferase domain MWH06_07450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MWH06_07450 PF01409 tRNA synthetases class II core domain (F) MWH06_07465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MWH06_07495 PF00578 AhpC/TSA family MWH06_07500 PF02463 RecF/RecN/SMC N terminal domain MWH06_07530 PF01551 Peptidase family M23 MWH06_07540 PF00216 Bacterial DNA-binding protein MWH06_07555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MWH06_07575 PF01380 SIS domain MWH06_07580 PF02699 Preprotein translocase subunit MWH06_07590 PF00318 Ribosomal protein S2 MWH06_07595 PF00889 Elongation factor TS MWH06_07600 PF00696 Amino acid kinase family MWH06_07605 PF01765 Ribosome recycling factor MWH06_07615 PF01255 Putative undecaprenyl diphosphate synthase MWH06_07630 PF01467 Cytidylyltransferase-like MWH06_07710 PF00005 ABC transporter MWH06_07710 PF00571 CBS domain MWH06_07715 PF02405 Permease MlaE MWH06_07720 PF01783 Ribosomal L32p protein family MWH06_07725 PF02504 Fatty acid synthesis protein MWH06_07730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MWH06_07730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MWH06_07760 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MWH06_07760 PF14602 Hexapeptide repeat of succinyl-transferase MWH06_07760 PF00132 Bacterial transferase hexapeptide (six repeats) MWH06_07765 PF13717 zinc-ribbon domain MWH06_07770 PF00834 Ribulose-phosphate 3 epimerase family MWH06_07775 PF00575 S1 RNA binding domain MWH06_07775 PF03725 3' exoribonuclease family, domain 2 MWH06_07775 PF01138 3' exoribonuclease family, domain 1 MWH06_07775 PF00013 KH domain MWH06_07775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MWH06_07780 PF00312 Ribosomal protein S15 MWH06_07785 PF16198 tRNA pseudouridylate synthase B C-terminal domain MWH06_07785 PF01509 TruB family pseudouridylate synthase (N terminal domain) MWH06_07795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MWH06_07795 PF01872 RibD C-terminal domain MWH06_07800 PF01966 HD domain MWH06_07800 PF13286 Phosphohydrolase-associated domain MWH06_07805 PF01521 Iron-sulphur cluster biosynthesis MWH06_07810 PF00005 ABC transporter MWH06_07815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MWH06_07820 PF00266 Aminotransferase class-V MWH06_07830 PF12796 Ankyrin repeats (3 copies) MWH06_07835 PF00528 Binding-protein-dependent transport system inner membrane component MWH06_07840 PF00581 Rhodanese-like domain MWH06_07840 PF17773 UPF0176 acylphosphatase like domain MWH06_07860 PF02785 Biotin carboxylase C-terminal domain MWH06_07860 PF00289 Biotin carboxylase, N-terminal domain MWH06_07860 PF00364 Biotin-requiring enzyme MWH06_07860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MWH06_07860 PF18140 Propionyl-coenzyme A carboxylase BT domain MWH06_07865 PF02628 Cytochrome oxidase assembly protein MWH06_07890 PF00137 ATP synthase subunit C MWH06_07895 PF00119 ATP synthase A chain