locus-tag class description DEJ70_00005 PF01208 Uroporphyrinogen decarboxylase (URO-D) DEJ70_00015 PF00893 Small Multidrug Resistance protein DEJ70_00030 PF00464 Serine hydroxymethyltransferase DEJ70_00035 PF00162 Phosphoglycerate kinase DEJ70_00050 PF00834 Ribulose-phosphate 3 epimerase family DEJ70_00060 PF00312 Ribosomal protein S15 DEJ70_00065 PF01509 TruB family pseudouridylate synthase (N terminal domain) DEJ70_00065 PF16198 tRNA pseudouridylate synthase B C-terminal domain DEJ70_00070 PF13333 Integrase core domain DEJ70_00070 PF00665 Integrase core domain DEJ70_00070 PF13276 HTH-like domain DEJ70_00075 PF01527 Transposase DEJ70_00085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_00090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DEJ70_00090 PF01872 RibD C-terminal domain DEJ70_00095 PF01966 HD domain DEJ70_00095 PF13286 Phosphohydrolase-associated domain DEJ70_00100 PF01521 Iron-sulphur cluster biosynthesis DEJ70_00105 PF00005 ABC transporter DEJ70_00115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DEJ70_00120 PF00266 Aminotransferase class-V DEJ70_00125 PF01027 Inhibitor of apoptosis-promoting Bax1 DEJ70_00130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DEJ70_00145 PF00107 Zinc-binding dehydrogenase DEJ70_00145 PF08240 Alcohol dehydrogenase GroES-like domain DEJ70_00150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_00175 PF02401 LytB protein DEJ70_00200 PF00436 Single-strand binding protein family DEJ70_00205 PF00701 Dihydrodipicolinate synthetase family DEJ70_00220 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_00230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DEJ70_00230 PF01926 50S ribosome-binding GTPase DEJ70_00240 PF01039 Carboxyl transferase domain DEJ70_00290 PF00579 tRNA synthetases class I (W and Y) DEJ70_00305 PF00171 Aldehyde dehydrogenase family DEJ70_00315 PF00293 NUDIX domain DEJ70_00320 PF01026 TatD related DNase DEJ70_00325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DEJ70_00325 PF00056 lactate/malate dehydrogenase, NAD binding domain DEJ70_00330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DEJ70_00335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEJ70_00340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DEJ70_00345 PF01230 HIT domain DEJ70_00360 PF02875 Mur ligase family, glutamate ligase domain DEJ70_00360 PF01225 Mur ligase family, catalytic domain DEJ70_00360 PF08245 Mur ligase middle domain DEJ70_00365 PF01370 NAD dependent epimerase/dehydratase family DEJ70_00365 PF08338 Domain of unknown function (DUF1731) DEJ70_00375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEJ70_00375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEJ70_00380 PF02504 Fatty acid synthesis protein DEJ70_00385 PF01783 Ribosomal L32p protein family DEJ70_00390 PF02405 Permease MlaE DEJ70_00395 PF00005 ABC transporter DEJ70_00400 PF02978 Signal peptide binding domain DEJ70_00400 PF00448 SRP54-type protein, GTPase domain DEJ70_00400 PF02881 SRP54-type protein, helical bundle domain DEJ70_00415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_00420 PF07977 FabA-like domain DEJ70_00430 PF07244 Surface antigen variable number repeat DEJ70_00430 PF01103 Surface antigen DEJ70_00435 PF02163 Peptidase family M50 DEJ70_00435 PF17820 PDZ domain DEJ70_00450 PF00216 Bacterial DNA-binding protein DEJ70_00455 PF00575 S1 RNA binding domain DEJ70_00460 PF02390 Putative methyltransferase DEJ70_00480 PF13276 HTH-like domain DEJ70_00480 PF00665 Integrase core domain DEJ70_00480 PF13333 Integrase core domain DEJ70_00500 PF01678 Diaminopimelate epimerase DEJ70_00505 PF00549 CoA-ligase DEJ70_00505 PF02629 CoA binding domain DEJ70_00510 PF00549 CoA-ligase DEJ70_00510 PF08442 ATP-grasp domain DEJ70_00525 PF04452 RNA methyltransferase DEJ70_00545 PF01218 Coproporphyrinogen III oxidase DEJ70_00555 PF13614 AAA domain DEJ70_00560 PF17762 HTH domain found in ParB protein DEJ70_00560 PF02195 ParB-like nuclease domain DEJ70_00565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DEJ70_00565 PF02542 YgbB family DEJ70_00580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_00590 PF01782 RimM N-terminal domain DEJ70_00590 PF05239 PRC-barrel domain DEJ70_00595 PF01132 Elongation factor P (EF-P) OB domain DEJ70_00595 PF08207 Elongation factor P (EF-P) KOW-like domain DEJ70_00595 PF09285 Elongation factor P, C-terminal DEJ70_00605 PF00155 Aminotransferase class I and II DEJ70_00615 PF00183 Hsp90 protein DEJ70_00630 PF13662 Toprim domain DEJ70_00630 PF02132 RecR protein DEJ70_00650 PF00270 DEAD/DEAH box helicase DEJ70_00650 PF00271 Helicase conserved C-terminal domain DEJ70_00650 PF17764 3′ DNA-binding domain (3′BD) DEJ70_00650 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DEJ70_00650 PF18074 Primosomal protein N C-terminal domain DEJ70_00660 PF13606 Ankyrin repeat DEJ70_00660 PF12796 Ankyrin repeats (3 copies) DEJ70_00665 PF02511 Thymidylate synthase complementing protein DEJ70_00670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DEJ70_00675 PF00109 Beta-ketoacyl synthase, N-terminal domain DEJ70_00675 PF02801 Beta-ketoacyl synthase, C-terminal domain DEJ70_00680 PF00550 Phosphopantetheine attachment site DEJ70_00685 PF00348 Polyprenyl synthetase DEJ70_00695 PF10431 C-terminal, D2-small domain, of ClpB protein DEJ70_00695 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_00695 PF07724 AAA domain (Cdc48 subfamily) DEJ70_00700 PF00227 Proteasome subunit DEJ70_00715 PF00762 Ferrochelatase DEJ70_00725 PF00334 Nucleoside diphosphate kinase DEJ70_00730 PF00202 Aminotransferase class-III DEJ70_00735 PF00571 CBS domain DEJ70_00735 PF03471 Transporter associated domain DEJ70_00735 PF01595 Cyclin M transmembrane N-terminal domain DEJ70_00740 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DEJ70_00745 PF02441 Flavoprotein DEJ70_00750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DEJ70_00750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DEJ70_00765 PF09334 tRNA synthetases class I (M) DEJ70_00765 PF08264 Anticodon-binding domain of tRNA DEJ70_00765 PF00133 tRNA synthetases class I (I, L, M and V) DEJ70_00765 PF13603 Leucyl-tRNA synthetase, Domain 2 DEJ70_00770 PF01551 Peptidase family M23 DEJ70_00775 PF13411 MerR HTH family regulatory protein DEJ70_00780 PF00216 Bacterial DNA-binding protein DEJ70_00870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_00890 PF03099 Biotin/lipoate A/B protein ligase family DEJ70_00895 PF17676 LD-carboxypeptidase C-terminal domain DEJ70_00895 PF02016 LD-carboxypeptidase N-terminal domain DEJ70_00905 PF14579 Helix-hairpin-helix motif DEJ70_00905 PF02811 PHP domain DEJ70_00905 PF07733 Bacterial DNA polymerase III alpha NTPase domain DEJ70_00905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DEJ70_00910 PF01250 Ribosomal protein S6 DEJ70_00915 PF01084 Ribosomal protein S18 DEJ70_00920 PF03948 Ribosomal protein L9, C-terminal domain DEJ70_00920 PF01281 Ribosomal protein L9, N-terminal domain DEJ70_00925 PF10397 Adenylosuccinate lyase C-terminus DEJ70_00925 PF00206 Lyase DEJ70_00940 PF13333 Integrase core domain DEJ70_00940 PF00665 Integrase core domain DEJ70_00940 PF13276 HTH-like domain DEJ70_00945 PF01527 Transposase DEJ70_00950 PF13685 Iron-containing alcohol dehydrogenase DEJ70_00955 PF01546 Peptidase family M20/M25/M40 DEJ70_00955 PF07687 Peptidase dimerisation domain DEJ70_00995 PF00186 Dihydrofolate reductase DEJ70_01000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DEJ70_01000 PF00809 Pterin binding enzyme DEJ70_01005 PF02152 Dihydroneopterin aldolase DEJ70_01010 PF03070 TENA/THI-4/PQQC family DEJ70_01055 PF00085 Thioredoxin DEJ70_01060 PF00570 HRDC domain DEJ70_01060 PF01612 3'-5' exonuclease DEJ70_01075 PF07650 KH domain DEJ70_01075 PF01926 50S ribosome-binding GTPase DEJ70_01105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_01120 PF00033 Cytochrome b/b6/petB DEJ70_01120 PF00032 Cytochrome b(C-terminal)/b6/petD DEJ70_01125 PF02167 Cytochrome C1 family DEJ70_01125 PF00032 Cytochrome b(C-terminal)/b6/petD DEJ70_01125 PF00033 Cytochrome b/b6/petB DEJ70_01130 PF17757 UvrB interaction domain DEJ70_01130 PF00271 Helicase conserved C-terminal domain DEJ70_01130 PF04851 Type III restriction enzyme, res subunit DEJ70_01130 PF02151 UvrB/uvrC motif DEJ70_01130 PF12344 Ultra-violet resistance protein B DEJ70_01150 PF01556 DnaJ C terminal domain DEJ70_01150 PF00226 DnaJ domain DEJ70_01150 PF00684 DnaJ central domain DEJ70_01160 PF13393 Histidyl-tRNA synthetase DEJ70_01160 PF03129 Anticodon binding domain DEJ70_01165 PF01975 Survival protein SurE DEJ70_01175 PF13520 Amino acid permease DEJ70_01180 PF00324 Amino acid permease DEJ70_01190 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEJ70_01190 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEJ70_01195 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DEJ70_01195 PF02222 ATP-grasp domain DEJ70_01200 PF04379 ApaG domain DEJ70_01205 PF00528 Binding-protein-dependent transport system inner membrane component DEJ70_01255 PF01921 tRNA synthetases class I (K) DEJ70_01265 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DEJ70_01270 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DEJ70_01275 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DEJ70_01280 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DEJ70_01285 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DEJ70_01320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_01325 PF01368 DHH family DEJ70_01325 PF02272 DHHA1 domain DEJ70_01325 PF17768 RecJ OB domain DEJ70_01330 PF00919 Uncharacterized protein family UPF0004 DEJ70_01330 PF01938 TRAM domain DEJ70_01330 PF04055 Radical SAM superfamily DEJ70_01335 PF08264 Anticodon-binding domain of tRNA DEJ70_01335 PF00133 tRNA synthetases class I (I, L, M and V) DEJ70_01345 PF03483 B3/4 domain DEJ70_01345 PF03484 tRNA synthetase B5 domain DEJ70_01345 PF03147 Ferredoxin-fold anticodon binding domain DEJ70_01345 PF01588 Putative tRNA binding domain DEJ70_01345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DEJ70_01355 PF00119 ATP synthase A chain DEJ70_01360 PF00137 ATP synthase subunit C DEJ70_01380 PF02628 Cytochrome oxidase assembly protein DEJ70_01385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEJ70_01385 PF00289 Biotin carboxylase, N-terminal domain DEJ70_01385 PF02785 Biotin carboxylase C-terminal domain DEJ70_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEJ70_01400 PF00011 Hsp20/alpha crystallin family DEJ70_01410 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DEJ70_01420 PF00380 Ribosomal protein S9/S16 DEJ70_01425 PF00572 Ribosomal protein L13 DEJ70_01430 PF02321 Outer membrane efflux protein DEJ70_01435 PF10691 Protein of unknown function (DUF2497) DEJ70_01440 PF01728 FtsJ-like methyltransferase DEJ70_01465 PF01702 Queuine tRNA-ribosyltransferase DEJ70_01475 PF05193 Peptidase M16 inactive domain DEJ70_01475 PF00675 Insulinase (Peptidase family M16) DEJ70_01480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DEJ70_01480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DEJ70_01510 PF03023 Lipid II flippase MurJ DEJ70_01525 PF13932 GidA associated domain DEJ70_01525 PF01134 Glucose inhibited division protein A DEJ70_01530 PF00557 Metallopeptidase family M24 DEJ70_01530 PF01321 Creatinase/Prolidase N-terminal domain DEJ70_01565 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DEJ70_01580 PF03060 Nitronate monooxygenase DEJ70_01590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEJ70_01600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_01635 PF00072 Response regulator receiver domain DEJ70_01635 PF00486 Transcriptional regulatory protein, C terminal DEJ70_01640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DEJ70_01640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DEJ70_01645 PF04608 Phosphatidylglycerophosphatase A DEJ70_01660 PF13085 2Fe-2S iron-sulfur cluster binding domain DEJ70_01665 PF02130 Uncharacterized protein family UPF0054 DEJ70_01675 PF12327 FtsZ family, C-terminal domain DEJ70_01675 PF00091 Tubulin/FtsZ family, GTPase domain DEJ70_01700 PF01522 Polysaccharide deacetylase DEJ70_01705 PF03717 Penicillin-binding Protein dimerisation domain DEJ70_01705 PF00905 Penicillin binding protein transpeptidase domain DEJ70_01710 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEJ70_01710 PF05362 Lon protease (S16) C-terminal proteolytic domain DEJ70_01710 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_01715 PF07724 AAA domain (Cdc48 subfamily) DEJ70_01715 PF10431 C-terminal, D2-small domain, of ClpB protein DEJ70_01715 PF06689 ClpX C4-type zinc finger DEJ70_01720 PF00574 Clp protease DEJ70_01725 PF05698 Bacterial trigger factor protein (TF) C-terminus DEJ70_01725 PF05697 Bacterial trigger factor protein (TF) DEJ70_01725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEJ70_01735 PF04972 BON domain DEJ70_01750 PF17827 PrmC N-terminal domain DEJ70_01750 PF02390 Putative methyltransferase DEJ70_01750 PF05175 Methyltransferase small domain DEJ70_01755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_01765 PF00164 Ribosomal protein S12/S23 DEJ70_01770 PF00177 Ribosomal protein S7p/S5e DEJ70_01775 PF03144 Elongation factor Tu domain 2 DEJ70_01775 PF00679 Elongation factor G C-terminus DEJ70_01775 PF14492 Elongation Factor G, domain II DEJ70_01775 PF03764 Elongation factor G, domain IV DEJ70_01775 PF00009 Elongation factor Tu GTP binding domain DEJ70_01780 PF03144 Elongation factor Tu domain 2 DEJ70_01780 PF03143 Elongation factor Tu C-terminal domain DEJ70_01780 PF00009 Elongation factor Tu GTP binding domain DEJ70_01795 PF02357 Transcription termination factor nusG DEJ70_01795 PF00467 KOW motif DEJ70_01800 PF03946 Ribosomal protein L11, N-terminal domain DEJ70_01800 PF00298 Ribosomal protein L11, RNA binding domain DEJ70_01805 PF00687 Ribosomal protein L1p/L10e family DEJ70_01810 PF00466 Ribosomal protein L10 DEJ70_01820 PF04563 RNA polymerase beta subunit DEJ70_01820 PF04561 RNA polymerase Rpb2, domain 2 DEJ70_01820 PF04565 RNA polymerase Rpb2, domain 3 DEJ70_01820 PF05000 RNA polymerase Rpb1, domain 4 DEJ70_01820 PF10385 RNA polymerase beta subunit external 1 domain DEJ70_01820 PF00562 RNA polymerase Rpb2, domain 6 DEJ70_01820 PF04560 RNA polymerase Rpb2, domain 7 DEJ70_01820 PF04983 RNA polymerase Rpb1, domain 3 DEJ70_01820 PF00623 RNA polymerase Rpb1, domain 2 DEJ70_01820 PF04998 RNA polymerase Rpb1, domain 5 DEJ70_01820 PF04997 RNA polymerase Rpb1, domain 1 DEJ70_01825 PF01207 Dihydrouridine synthase (Dus) DEJ70_01835 PF02403 Seryl-tRNA synthetase N-terminal domain DEJ70_01835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEJ70_01840 PF02843 Phosphoribosylglycinamide synthetase, C domain DEJ70_01840 PF02844 Phosphoribosylglycinamide synthetase, N domain DEJ70_01840 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DEJ70_01850 PF00180 Isocitrate/isopropylmalate dehydrogenase DEJ70_01850 PF18324 Hypothetical protein TT1725 DEJ70_01860 PF01527 Transposase DEJ70_01895 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_01945 PF14602 Hexapeptide repeat of succinyl-transferase DEJ70_01945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DEJ70_01945 PF00132 Bacterial transferase hexapeptide (six repeats) DEJ70_01955 PF00890 FAD binding domain DEJ70_01955 PF02910 Fumarate reductase flavoprotein C-term DEJ70_01965 PF00625 Guanylate kinase DEJ70_01980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DEJ70_01980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DEJ70_01985 PF13416 Bacterial extracellular solute-binding protein DEJ70_02005 PF01513 ATP-NAD kinase DEJ70_02010 PF01197 Ribosomal protein L31 DEJ70_02015 PF00698 Acyl transferase domain DEJ70_02025 PF01676 Metalloenzyme superfamily DEJ70_02025 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DEJ70_02040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEJ70_02040 PF01411 tRNA synthetases class II (A) DEJ70_02040 PF02272 DHHA1 domain DEJ70_02060 PF01632 Ribosomal protein L35 DEJ70_02065 PF00453 Ribosomal protein L20 DEJ70_02070 PF00551 Formyl transferase DEJ70_02070 PF02911 Formyl transferase, C-terminal domain DEJ70_02080 PF01808 AICARFT/IMPCHase bienzyme DEJ70_02080 PF02142 MGS-like domain DEJ70_02100 PF00633 Helix-hairpin-helix motif DEJ70_02100 PF10576 Iron-sulfur binding domain of endonuclease III DEJ70_02100 PF00730 HhH-GPD superfamily base excision DNA repair protein DEJ70_02115 PF08245 Mur ligase middle domain DEJ70_02130 PF08245 Mur ligase middle domain DEJ70_02130 PF02875 Mur ligase family, glutamate ligase domain DEJ70_02145 PF03364 Polyketide cyclase / dehydrase and lipid transport DEJ70_02150 PF13462 Thioredoxin DEJ70_02180 PF12169 DNA polymerase III subunits gamma and tau domain III DEJ70_02185 PF02575 YbaB/EbfC DNA-binding family DEJ70_02190 PF13505 Outer membrane protein beta-barrel domain DEJ70_02195 PF00140 Sigma-70 factor, region 1.2 DEJ70_02195 PF04542 Sigma-70 region 2 DEJ70_02195 PF04545 Sigma-70, region 4 DEJ70_02205 PF02768 DNA polymerase III beta subunit, C-terminal domain DEJ70_02205 PF00712 DNA polymerase III beta subunit, N-terminal domain DEJ70_02205 PF02767 DNA polymerase III beta subunit, central domain DEJ70_02210 PF01416 tRNA pseudouridine synthase DEJ70_02215 PF00154 recA bacterial DNA recombination protein DEJ70_02225 PF01195 Peptidyl-tRNA hydrolase DEJ70_02230 PF01386 Ribosomal L25p family DEJ70_02230 PF14693 Ribosomal protein TL5, C-terminal domain DEJ70_02250 PF01795 MraW methylase family DEJ70_02255 PF07690 Major Facilitator Superfamily DEJ70_02255 PF00083 Sugar (and other) transporter DEJ70_02260 PF00557 Metallopeptidase family M24 DEJ70_02265 PF02491 SHS2 domain inserted in FTSA DEJ70_02270 PF01327 Polypeptide deformylase DEJ70_02275 PF03167 Uracil DNA glycosylase superfamily DEJ70_02290 PF13537 Glutamine amidotransferase domain DEJ70_02290 PF00156 Phosphoribosyl transferase domain DEJ70_02305 PF03631 Virulence factor BrkB DEJ70_02315 PF02142 MGS-like domain DEJ70_02315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEJ70_02315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DEJ70_02325 PF00849 RNA pseudouridylate synthase DEJ70_02335 PF00753 Metallo-beta-lactamase superfamily DEJ70_02335 PF03772 Competence protein DEJ70_02355 PF02223 Thymidylate kinase DEJ70_02365 PF02254 TrkA-N domain DEJ70_02365 PF00999 Sodium/hydrogen exchanger family DEJ70_02370 PF13840 ACT domain DEJ70_02370 PF01842 ACT domain DEJ70_02370 PF00696 Amino acid kinase family DEJ70_02375 PF02463 RecF/RecN/SMC N terminal domain DEJ70_02380 PF00578 AhpC/TSA family DEJ70_02385 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DEJ70_02385 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DEJ70_02390 PF04101 Glycosyltransferase family 28 C-terminal domain DEJ70_02390 PF03033 Glycosyltransferase family 28 N-terminal domain DEJ70_02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_02400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEJ70_02420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_02445 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_02450 PF09312 SurA N-terminal domain DEJ70_02460 PF00719 Inorganic pyrophosphatase DEJ70_02485 PF00691 OmpA family DEJ70_02490 PF01171 PP-loop family DEJ70_02495 PF06480 FtsH Extracellular DEJ70_02495 PF01434 Peptidase family M41 DEJ70_02495 PF17862 AAA+ lid domain DEJ70_02495 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_02500 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_02500 PF17862 AAA+ lid domain DEJ70_02500 PF01434 Peptidase family M41 DEJ70_02500 PF06480 FtsH Extracellular DEJ70_02510 PF01434 Peptidase family M41 DEJ70_02510 PF06480 FtsH Extracellular DEJ70_02510 PF17862 AAA+ lid domain DEJ70_02510 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_02535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEJ70_02535 PF02817 e3 binding domain DEJ70_02535 PF00364 Biotin-requiring enzyme DEJ70_02565 PF00005 ABC transporter DEJ70_02565 PF00664 ABC transporter transmembrane region DEJ70_02575 PF00814 Glycoprotease family DEJ70_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEJ70_02585 PF00512 His Kinase A (phospho-acceptor) domain DEJ70_02585 PF00989 PAS fold DEJ70_02585 PF13426 PAS domain DEJ70_02585 PF13188 PAS domain DEJ70_02590 PF00202 Aminotransferase class-III DEJ70_02605 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_02620 PF01594 AI-2E family transporter DEJ70_02630 PF02899 Phage integrase, N-terminal SAM-like domain DEJ70_02630 PF00589 Phage integrase family DEJ70_02640 PF01649 Ribosomal protein S20 DEJ70_02645 PF00285 Citrate synthase, C-terminal domain DEJ70_02675 PF05496 Holliday junction DNA helicase RuvB P-loop domain DEJ70_02675 PF17864 RuvB AAA lid domain DEJ70_02675 PF05491 RuvB C-terminal winged helix domain DEJ70_02680 PF07499 RuvA, C-terminal domain DEJ70_02680 PF01330 RuvA N terminal domain DEJ70_02685 PF00034 Cytochrome c DEJ70_02695 PF13361 UvrD-like helicase C-terminal domain DEJ70_02695 PF00580 UvrD/REP helicase N-terminal domain DEJ70_02705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DEJ70_02710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DEJ70_02715 PF00361 Proton-conducting membrane transporter DEJ70_02715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEJ70_02720 PF00361 Proton-conducting membrane transporter DEJ70_02725 PF00361 Proton-conducting membrane transporter DEJ70_02730 PF02237 Biotin protein ligase C terminal domain DEJ70_02730 PF03099 Biotin/lipoate A/B protein ligase family DEJ70_02735 PF03100 CcmE DEJ70_02810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_02835 PF17871 AAA lid domain DEJ70_02835 PF02861 Clp amino terminal domain, pathogenicity island component DEJ70_02835 PF07724 AAA domain (Cdc48 subfamily) DEJ70_02835 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_02835 PF10431 C-terminal, D2-small domain, of ClpB protein DEJ70_02840 PF05088 Bacterial NAD-glutamate dehydrogenase DEJ70_02850 PF00990 Diguanylate cyclase, GGDEF domain DEJ70_02850 PF00072 Response regulator receiver domain DEJ70_02855 PF11967 Recombination protein O N terminal DEJ70_02855 PF02565 Recombination protein O C terminal DEJ70_02900 PF03796 DnaB-like helicase C terminal domain DEJ70_02900 PF00772 DnaB-like helicase N terminal domain DEJ70_02925 PF01040 UbiA prenyltransferase family DEJ70_02930 PF02033 Ribosome-binding factor A DEJ70_02935 PF11987 Translation-initiation factor 2 DEJ70_02935 PF00009 Elongation factor Tu GTP binding domain DEJ70_02935 PF04760 Translation initiation factor IF-2, N-terminal region DEJ70_02940 PF00575 S1 RNA binding domain DEJ70_02940 PF13184 NusA-like KH domain DEJ70_02940 PF08529 NusA N-terminal domain DEJ70_02965 PF00120 Glutamine synthetase, catalytic domain DEJ70_02970 PF08299 Bacterial dnaA protein helix-turn-helix DEJ70_02970 PF11638 DnaA N-terminal domain DEJ70_02970 PF00308 Bacterial dnaA protein DEJ70_02975 PF02355 Protein export membrane protein DEJ70_02975 PF07549 SecD/SecF GG Motif DEJ70_02990 PF14849 YidC periplasmic domain DEJ70_02990 PF02096 60Kd inner membrane protein DEJ70_02995 PF00885 6,7-dimethyl-8-ribityllumazine synthase DEJ70_03000 PF01029 NusB family DEJ70_03010 PF00692 dUTPase DEJ70_03020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03030 PF10417 C-terminal domain of 1-Cys peroxiredoxin DEJ70_03030 PF00578 AhpC/TSA family DEJ70_03035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_03045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03110 PF03109 ABC1 family DEJ70_03115 PF00005 ABC transporter DEJ70_03120 PF01297 Zinc-uptake complex component A periplasmic DEJ70_03135 PF00471 Ribosomal protein L33 DEJ70_03140 PF10150 Ribonuclease E/G family DEJ70_03140 PF00575 S1 RNA binding domain DEJ70_03140 PF12111 Polyribonucleotide phosphorylase C terminal DEJ70_03145 PF00012 Hsp70 protein DEJ70_03150 PF01722 BolA-like protein DEJ70_03155 PF01053 Cys/Met metabolism PLP-dependent enzyme DEJ70_03160 PF02875 Mur ligase family, glutamate ligase domain DEJ70_03160 PF08245 Mur ligase middle domain DEJ70_03175 PF01300 Telomere recombination DEJ70_03180 PF12169 DNA polymerase III subunits gamma and tau domain III DEJ70_03195 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEJ70_03195 PF13244 Domain of unknown function (DUF4040) DEJ70_03195 PF00361 Proton-conducting membrane transporter DEJ70_03200 PF00772 DnaB-like helicase N terminal domain DEJ70_03200 PF03796 DnaB-like helicase C terminal domain DEJ70_03210 PF06271 RDD family DEJ70_03230 PF01979 Amidohydrolase family DEJ70_03235 PF00570 HRDC domain DEJ70_03235 PF01612 3'-5' exonuclease DEJ70_03240 PF01121 Dephospho-CoA kinase DEJ70_03250 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03290 PF12796 Ankyrin repeats (3 copies) DEJ70_03295 PF00268 Ribonucleotide reductase, small chain DEJ70_03310 PF08264 Anticodon-binding domain of tRNA DEJ70_03310 PF09334 tRNA synthetases class I (M) DEJ70_03315 PF01527 Transposase DEJ70_03320 PF13333 Integrase core domain DEJ70_03320 PF00665 Integrase core domain DEJ70_03320 PF13276 HTH-like domain DEJ70_03330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03365 PF00902 Sec-independent protein translocase protein (TatC) DEJ70_03370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DEJ70_03370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEJ70_03390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03410 PF01743 Poly A polymerase head domain DEJ70_03410 PF12627 Probable RNA and SrmB- binding site of polymerase A DEJ70_03410 PF13735 tRNA nucleotidyltransferase domain 2 putative DEJ70_03420 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEJ70_03435 PF00950 ABC 3 transport family DEJ70_03445 PF08544 GHMP kinases C terminal DEJ70_03445 PF00288 GHMP kinases N terminal domain DEJ70_03450 PF12705 PD-(D/E)XK nuclease superfamily DEJ70_03450 PF00580 UvrD/REP helicase N-terminal domain DEJ70_03450 PF13361 UvrD-like helicase C-terminal domain DEJ70_03490 PF00111 2Fe-2S iron-sulfur cluster binding domain DEJ70_03505 PF01807 CHC2 zinc finger DEJ70_03505 PF08275 DNA primase catalytic core, N-terminal domain DEJ70_03505 PF13662 Toprim domain DEJ70_03510 PF08241 Methyltransferase domain DEJ70_03520 PF00814 Glycoprotease family DEJ70_03545 PF01258 Prokaryotic dksA/traR C4-type zinc finger DEJ70_03550 PF00684 DnaJ central domain DEJ70_03550 PF01556 DnaJ C terminal domain DEJ70_03550 PF00226 DnaJ domain DEJ70_03560 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03575 PF01225 Mur ligase family, catalytic domain DEJ70_03575 PF08245 Mur ligase middle domain DEJ70_03575 PF02875 Mur ligase family, glutamate ligase domain DEJ70_03580 PF03330 Lytic transglycolase DEJ70_03590 PF01494 FAD binding domain DEJ70_03605 PF01467 Cytidylyltransferase-like DEJ70_03620 PF01255 Putative undecaprenyl diphosphate synthase DEJ70_03630 PF02817 e3 binding domain DEJ70_03630 PF00364 Biotin-requiring enzyme DEJ70_03630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEJ70_03635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03670 PF01926 50S ribosome-binding GTPase DEJ70_03670 PF06071 Protein of unknown function (DUF933) DEJ70_03680 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DEJ70_03695 PF00005 ABC transporter DEJ70_03700 PF02416 mttA/Hcf106 family DEJ70_03710 PF06055 Exopolysaccharide synthesis, ExoD DEJ70_03715 PF01406 tRNA synthetases class I (C) catalytic domain DEJ70_03715 PF09190 DALR domain DEJ70_03730 PF00075 RNase H DEJ70_03735 PF01040 UbiA prenyltransferase family DEJ70_03740 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEJ70_03745 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DEJ70_03745 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DEJ70_03750 PF00529 HlyD membrane-fusion protein of T1SS DEJ70_03750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEJ70_03760 PF00676 Dehydrogenase E1 component DEJ70_03765 PF02934 GatB/GatE catalytic domain DEJ70_03765 PF02637 GatB domain DEJ70_03780 PF00589 Phage integrase family DEJ70_03780 PF02899 Phage integrase, N-terminal SAM-like domain DEJ70_03785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEJ70_03785 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_03795 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEJ70_03805 PF08264 Anticodon-binding domain of tRNA DEJ70_03805 PF00133 tRNA synthetases class I (I, L, M and V) DEJ70_03820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DEJ70_03845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03865 PF01113 Dihydrodipicolinate reductase, N-terminus DEJ70_03865 PF05173 Dihydrodipicolinate reductase, C-terminus DEJ70_03870 PF00005 ABC transporter DEJ70_03890 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DEJ70_03890 PF13288 DXP reductoisomerase C-terminal domain DEJ70_03890 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DEJ70_03905 PF01527 Transposase DEJ70_03915 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_03925 PF00665 Integrase core domain DEJ70_03925 PF13276 HTH-like domain DEJ70_03925 PF13333 Integrase core domain DEJ70_03935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEJ70_03935 PF03129 Anticodon binding domain DEJ70_03940 PF01648 4'-phosphopantetheinyl transferase superfamily DEJ70_03965 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_04005 PF01235 Sodium:alanine symporter family DEJ70_04020 PF02545 Maf-like protein DEJ70_04025 PF01176 Translation initiation factor 1A / IF-1 DEJ70_04035 PF00709 Adenylosuccinate synthetase DEJ70_04050 PF00696 Amino acid kinase family DEJ70_04055 PF01926 50S ribosome-binding GTPase DEJ70_04060 PF00472 RF-1 domain DEJ70_04060 PF03462 PCRF domain DEJ70_04095 PF07690 Major Facilitator Superfamily DEJ70_04110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_04120 PF04551 GcpE protein DEJ70_04125 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_04150 PF09397 Ftsk gamma domain DEJ70_04150 PF01580 FtsK/SpoIIIE family DEJ70_04150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DEJ70_04150 PF17854 FtsK alpha domain DEJ70_04155 PF02325 YGGT family DEJ70_04160 PF01527 Transposase DEJ70_04165 PF13333 Integrase core domain DEJ70_04165 PF13276 HTH-like domain DEJ70_04165 PF00665 Integrase core domain DEJ70_04180 PF00665 Integrase core domain DEJ70_04180 PF13333 Integrase core domain DEJ70_04180 PF13276 HTH-like domain DEJ70_04185 PF01527 Transposase DEJ70_04190 PF01018 GTP1/OBG DEJ70_04190 PF01926 50S ribosome-binding GTPase DEJ70_04195 PF03952 Enolase, N-terminal domain DEJ70_04195 PF00113 Enolase, C-terminal TIM barrel domain DEJ70_04205 PF08245 Mur ligase middle domain DEJ70_04205 PF02875 Mur ligase family, glutamate ligase domain DEJ70_04205 PF01225 Mur ligase family, catalytic domain DEJ70_04210 PF02104 SURF1 family DEJ70_04215 PF00210 Ferritin-like domain DEJ70_04250 PF10415 Fumarase C C-terminus DEJ70_04250 PF00206 Lyase DEJ70_04265 PF00586 AIR synthase related protein, N-terminal domain DEJ70_04265 PF02769 AIR synthase related protein, C-terminal domain DEJ70_04265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DEJ70_04285 PF00226 DnaJ domain DEJ70_04285 PF01556 DnaJ C terminal domain DEJ70_04285 PF00684 DnaJ central domain DEJ70_04290 PF17770 Ribonuclease J C-terminal domain DEJ70_04290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DEJ70_04290 PF12706 Beta-lactamase superfamily domain DEJ70_04300 PF07676 WD40-like Beta Propeller Repeat DEJ70_04305 PF02686 Glu-tRNAGln amidotransferase C subunit DEJ70_04310 PF14572 Phosphoribosyl synthetase-associated domain DEJ70_04310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DEJ70_04315 PF02779 Transketolase, pyrimidine binding domain DEJ70_04315 PF02780 Transketolase, C-terminal domain DEJ70_04315 PF00456 Transketolase, thiamine diphosphate binding domain DEJ70_04320 PF00163 Ribosomal protein S4/S9 N-terminal domain DEJ70_04320 PF01479 S4 domain DEJ70_04330 PF04384 Iron-sulphur cluster assembly DEJ70_04340 PF00830 Ribosomal L28 family DEJ70_04345 PF04055 Radical SAM superfamily DEJ70_04345 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DEJ70_04360 PF00929 Exonuclease DEJ70_04385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_04410 PF17862 AAA+ lid domain DEJ70_04410 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_04410 PF06480 FtsH Extracellular DEJ70_04410 PF01434 Peptidase family M41 DEJ70_04430 PF17755 UvrA DNA-binding domain DEJ70_04430 PF17760 UvrA interaction domain DEJ70_04440 PF02779 Transketolase, pyrimidine binding domain DEJ70_04440 PF00364 Biotin-requiring enzyme DEJ70_04440 PF02780 Transketolase, C-terminal domain DEJ70_04450 PF10502 Signal peptidase, peptidase S26 DEJ70_04455 PF00012 Hsp70 protein DEJ70_04460 PF00226 DnaJ domain DEJ70_04460 PF07743 HSCB C-terminal oligomerisation domain DEJ70_04465 PF01521 Iron-sulphur cluster biosynthesis DEJ70_04470 PF01592 NifU-like N terminal domain DEJ70_04475 PF00448 SRP54-type protein, GTPase domain DEJ70_04475 PF02881 SRP54-type protein, helical bundle domain DEJ70_04500 PF01571 Aminomethyltransferase folate-binding domain DEJ70_04505 PF00166 Chaperonin 10 Kd subunit DEJ70_04510 PF00118 TCP-1/cpn60 chaperonin family DEJ70_04525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_04535 PF18073 Rubredoxin metal binding domain DEJ70_04540 PF00083 Sugar (and other) transporter DEJ70_04540 PF07690 Major Facilitator Superfamily DEJ70_04550 PF01131 DNA topoisomerase DEJ70_04550 PF01396 Topoisomerase DNA binding C4 zinc finger DEJ70_04550 PF13368 Topoisomerase C-terminal repeat DEJ70_04550 PF01751 Toprim domain DEJ70_04570 PF02534 Type IV secretory system Conjugative DNA transfer DEJ70_04575 PF00437 Type II/IV secretion system protein DEJ70_04590 PF04335 VirB8 protein DEJ70_04595 PF00925 GTP cyclohydrolase II DEJ70_04615 PF00692 dUTPase DEJ70_04620 PF02386 Cation transport protein DEJ70_04635 PF01765 Ribosome recycling factor DEJ70_04640 PF00696 Amino acid kinase family DEJ70_04645 PF00889 Elongation factor TS DEJ70_04650 PF00318 Ribosomal protein S2 DEJ70_04660 PF02699 Preprotein translocase subunit DEJ70_04665 PF01380 SIS domain DEJ70_04695 PF06418 CTP synthase N-terminus DEJ70_04695 PF00117 Glutamine amidotransferase class-I DEJ70_04705 PF14437 MafB19-like deaminase DEJ70_04715 PF00005 ABC transporter DEJ70_04720 PF00750 tRNA synthetases class I (R) DEJ70_04720 PF03485 Arginyl tRNA synthetase N terminal domain DEJ70_04720 PF05746 DALR anticodon binding domain DEJ70_04735 PF00005 ABC transporter DEJ70_04735 PF00664 ABC transporter transmembrane region DEJ70_04740 PF01209 ubiE/COQ5 methyltransferase family DEJ70_04745 PF07690 Major Facilitator Superfamily DEJ70_04780 PF00462 Glutaredoxin DEJ70_04790 PF03949 Malic enzyme, NAD binding domain DEJ70_04790 PF00390 Malic enzyme, N-terminal domain DEJ70_04790 PF01515 Phosphate acetyl/butaryl transferase DEJ70_04795 PF01066 CDP-alcohol phosphatidyltransferase DEJ70_04810 PF01709 Transcriptional regulator DEJ70_04815 PF01551 Peptidase family M23 DEJ70_04815 PF08525 Opacity-associated protein A N-terminal motif DEJ70_04815 PF01476 LysM domain DEJ70_04850 PF00391 PEP-utilising enzyme, mobile domain DEJ70_04850 PF02896 PEP-utilising enzyme, TIM barrel domain DEJ70_04850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DEJ70_04855 PF04002 RadC-like JAB domain DEJ70_04975 PF01272 Transcription elongation factor, GreA/GreB, C-term DEJ70_04975 PF03449 Transcription elongation factor, N-terminal DEJ70_04980 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEJ70_04980 PF00306 ATP synthase alpha/beta chain, C terminal domain DEJ70_04980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEJ70_04985 PF00213 ATP synthase delta (OSCP) subunit DEJ70_04990 PF02021 Uncharacterised protein family UPF0102 DEJ70_04995 PF01196 Ribosomal protein L17 DEJ70_05000 PF01000 RNA polymerase Rpb3/RpoA insert domain DEJ70_05000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DEJ70_05000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DEJ70_05005 PF00411 Ribosomal protein S11 DEJ70_05010 PF00416 Ribosomal protein S13/S18 DEJ70_05020 PF00344 SecY translocase DEJ70_05025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DEJ70_05030 PF03719 Ribosomal protein S5, C-terminal domain DEJ70_05030 PF00333 Ribosomal protein S5, N-terminal domain DEJ70_05035 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DEJ70_05040 PF00347 Ribosomal protein L6 DEJ70_05045 PF00410 Ribosomal protein S8 DEJ70_05050 PF00253 Ribosomal protein S14p/S29e DEJ70_05055 PF00281 Ribosomal protein L5 DEJ70_05055 PF00673 ribosomal L5P family C-terminus DEJ70_05060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DEJ70_05065 PF00238 Ribosomal protein L14p/L23e DEJ70_05070 PF00366 Ribosomal protein S17 DEJ70_05075 PF00831 Ribosomal L29 protein DEJ70_05080 PF00252 Ribosomal protein L16p/L10e DEJ70_05085 PF00189 Ribosomal protein S3, C-terminal domain DEJ70_05085 PF07650 KH domain DEJ70_05090 PF00237 Ribosomal protein L22p/L17e DEJ70_05095 PF00203 Ribosomal protein S19 DEJ70_05100 PF03947 Ribosomal Proteins L2, C-terminal domain DEJ70_05100 PF00181 Ribosomal Proteins L2, RNA binding domain DEJ70_05105 PF00276 Ribosomal protein L23 DEJ70_05110 PF00573 Ribosomal protein L4/L1 family DEJ70_05115 PF00297 Ribosomal protein L3 DEJ70_05120 PF00338 Ribosomal protein S10p/S20e DEJ70_05125 PF03143 Elongation factor Tu C-terminal domain DEJ70_05125 PF00009 Elongation factor Tu GTP binding domain DEJ70_05125 PF03144 Elongation factor Tu domain 2 DEJ70_05140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DEJ70_05140 PF00117 Glutamine amidotransferase class-I DEJ70_05150 PF00923 Transaldolase/Fructose-6-phosphate aldolase DEJ70_05165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_05180 PF00829 Ribosomal prokaryotic L21 protein DEJ70_05185 PF01016 Ribosomal L27 protein DEJ70_05195 PF00438 S-adenosylmethionine synthetase, N-terminal domain DEJ70_05195 PF02772 S-adenosylmethionine synthetase, central domain DEJ70_05195 PF02773 S-adenosylmethionine synthetase, C-terminal domain DEJ70_05200 PF03070 TENA/THI-4/PQQC family DEJ70_05210 PF00510 Cytochrome c oxidase subunit III DEJ70_05215 PF02075 Crossover junction endodeoxyribonuclease RuvC DEJ70_05220 PF03652 Holliday junction resolvase DEJ70_05225 PF02867 Ribonucleotide reductase, barrel domain DEJ70_05225 PF03477 ATP cone domain DEJ70_05225 PF00317 Ribonucleotide reductase, all-alpha domain DEJ70_05250 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_05270 PF00468 Ribosomal protein L34 DEJ70_05275 PF00528 Binding-protein-dependent transport system inner membrane component DEJ70_05280 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEJ70_05280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEJ70_05285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DEJ70_05300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_05320 PF12804 MobA-like NTP transferase domain DEJ70_05320 PF14602 Hexapeptide repeat of succinyl-transferase DEJ70_05320 PF00132 Bacterial transferase hexapeptide (six repeats) DEJ70_05325 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DEJ70_05325 PF01409 tRNA synthetases class II core domain (F) DEJ70_05335 PF00677 Lumazine binding domain DEJ70_05345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DEJ70_05345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DEJ70_05345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DEJ70_05345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DEJ70_05380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_05390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DEJ70_05390 PF00476 DNA polymerase family A DEJ70_05390 PF01367 5'-3' exonuclease, C-terminal SAM fold DEJ70_05395 PF01425 Amidase DEJ70_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEJ70_05400 PF01751 Toprim domain DEJ70_05400 PF00986 DNA gyrase B subunit, carboxyl terminus DEJ70_05400 PF00204 DNA gyrase B DEJ70_05420 PF02666 Phosphatidylserine decarboxylase DEJ70_05425 PF01066 CDP-alcohol phosphatidyltransferase DEJ70_05430 PF01235 Sodium:alanine symporter family DEJ70_05435 PF01235 Sodium:alanine symporter family DEJ70_05445 PF02660 Glycerol-3-phosphate acyltransferase DEJ70_05455 PF01545 Cation efflux family DEJ70_05480 PF00588 SpoU rRNA Methylase family DEJ70_05480 PF08032 RNA 2'-O ribose methyltransferase substrate binding DEJ70_05490 PF02151 UvrB/uvrC motif DEJ70_05490 PF01541 GIY-YIG catalytic domain DEJ70_05490 PF08459 UvrC Helix-hairpin-helix N-terminal DEJ70_05495 PF05746 DALR anticodon binding domain DEJ70_05495 PF02092 Glycyl-tRNA synthetase beta subunit DEJ70_05500 PF02091 Glycyl-tRNA synthetase alpha subunit DEJ70_05515 PF01527 Transposase DEJ70_05520 PF13333 Integrase core domain DEJ70_05520 PF00665 Integrase core domain DEJ70_05520 PF13276 HTH-like domain DEJ70_05525 PF00490 Delta-aminolevulinic acid dehydratase DEJ70_05530 PF00146 NADH dehydrogenase DEJ70_05535 PF00384 Molybdopterin oxidoreductase DEJ70_05535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DEJ70_05535 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DEJ70_05545 PF02789 Cytosol aminopeptidase family, N-terminal domain DEJ70_05545 PF00883 Cytosol aminopeptidase family, catalytic domain DEJ70_05555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DEJ70_05555 PF14850 DNA-binding domain of Proline dehydrogenase DEJ70_05555 PF00171 Aldehyde dehydrogenase family DEJ70_05555 PF01619 Proline dehydrogenase DEJ70_05560 PF00330 Aconitase family (aconitate hydratase) DEJ70_05560 PF00694 Aconitase C-terminal domain DEJ70_05565 PF02556 Preprotein translocase subunit SecB DEJ70_05575 PF00929 Exonuclease DEJ70_05580 PF02630 SCO1/SenC DEJ70_05590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_05605 PF00035 Double-stranded RNA binding motif DEJ70_05605 PF14622 Ribonuclease-III-like DEJ70_05610 PF01180 Dihydroorotate dehydrogenase DEJ70_05625 PF01791 DeoC/LacD family aldolase DEJ70_05635 PF07724 AAA domain (Cdc48 subfamily) DEJ70_05635 PF00004 ATPase family associated with various cellular activities (AAA) DEJ70_05635 PF10431 C-terminal, D2-small domain, of ClpB protein DEJ70_05635 PF17871 AAA lid domain DEJ70_05635 PF02861 Clp amino terminal domain, pathogenicity island component DEJ70_05640 PF00270 DEAD/DEAH box helicase DEJ70_05640 PF00271 Helicase conserved C-terminal domain DEJ70_05645 PF00313 'Cold-shock' DNA-binding domain DEJ70_05650 PF01523 Putative modulator of DNA gyrase DEJ70_05655 PF00231 ATP synthase DEJ70_05670 PF02687 FtsX-like permease family DEJ70_05670 PF12704 MacB-like periplasmic core domain DEJ70_05695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DEJ70_05700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DEJ70_05725 PF04539 Sigma-70 region 3 DEJ70_05725 PF04542 Sigma-70 region 2 DEJ70_05725 PF00140 Sigma-70 factor, region 1.2 DEJ70_05725 PF03979 Sigma-70 factor, region 1.1 DEJ70_05725 PF04546 Sigma-70, non-essential region DEJ70_05725 PF04545 Sigma-70, region 4 DEJ70_05730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DEJ70_05740 PF00361 Proton-conducting membrane transporter DEJ70_05740 PF13244 Domain of unknown function (DUF4040) DEJ70_05740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEJ70_05755 PF01192 RNA polymerase Rpb6 DEJ70_05765 PF00731 AIR carboxylase DEJ70_05770 PF08676 MutL C terminal dimerisation domain DEJ70_05770 PF01119 DNA mismatch repair protein, C-terminal domain DEJ70_05780 PF01145 SPFH domain / Band 7 family DEJ70_05785 PF01145 SPFH domain / Band 7 family DEJ70_05790 PF13180 PDZ domain DEJ70_05910 PF00121 Triosephosphate isomerase DEJ70_05920 PF00398 Ribosomal RNA adenine dimethylase DEJ70_05925 PF00478 IMP dehydrogenase / GMP reductase domain DEJ70_05925 PF00571 CBS domain DEJ70_05930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEJ70_05930 PF07497 Rho termination factor, RNA-binding domain DEJ70_05930 PF07498 Rho termination factor, N-terminal domain DEJ70_05945 PF00886 Ribosomal protein S16 DEJ70_05950 PF00348 Polyprenyl synthetase DEJ70_05955 PF01025 GrpE DEJ70_05960 PF00579 tRNA synthetases class I (W and Y) DEJ70_05980 PF01527 Transposase DEJ70_05985 PF00665 Integrase core domain DEJ70_05985 PF13333 Integrase core domain DEJ70_05985 PF13276 HTH-like domain DEJ70_05990 PF16870 2-oxoglutarate dehydrogenase C-terminal DEJ70_05990 PF02779 Transketolase, pyrimidine binding domain DEJ70_05990 PF00676 Dehydrogenase E1 component DEJ70_05990 PF16078 2-oxoglutarate dehydrogenase N-terminus DEJ70_06030 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DEJ70_06035 PF13091 PLD-like domain DEJ70_06065 PF01790 Prolipoprotein diacylglyceryl transferase DEJ70_06070 PF01668 SmpB protein DEJ70_06090 PF00551 Formyl transferase DEJ70_06100 PF00675 Insulinase (Peptidase family M16) DEJ70_06100 PF05193 Peptidase M16 inactive domain DEJ70_06105 PF01252 Signal peptidase (SPase) II DEJ70_06110 PF01687 Riboflavin kinase DEJ70_06110 PF06574 FAD synthetase DEJ70_06115 PF00462 Glutaredoxin DEJ70_06125 PF14492 Elongation Factor G, domain II DEJ70_06125 PF06421 GTP-binding protein LepA C-terminus DEJ70_06125 PF03144 Elongation factor Tu domain 2 DEJ70_06125 PF00679 Elongation factor G C-terminus DEJ70_06125 PF00009 Elongation factor Tu GTP binding domain DEJ70_06140 PF03471 Transporter associated domain DEJ70_06140 PF03741 Integral membrane protein TerC family DEJ70_06145 PF02540 NAD synthase DEJ70_06145 PF00117 Glutamine amidotransferase class-I DEJ70_06145 PF00958 GMP synthase C terminal domain DEJ70_06150 PF03958 Bacterial type II/III secretion system short domain DEJ70_06150 PF00263 Bacterial type II and III secretion system protein DEJ70_06170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06180 PF01578 Cytochrome C assembly protein DEJ70_06185 PF03618 Kinase/pyrophosphorylase DEJ70_06190 PF00444 Ribosomal protein L36 DEJ70_06210 PF00271 Helicase conserved C-terminal domain DEJ70_06210 PF00270 DEAD/DEAH box helicase DEJ70_06210 PF17191 RecG wedge domain DEJ70_06240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06255 PF04055 Radical SAM superfamily DEJ70_06255 PF00919 Uncharacterized protein family UPF0004 DEJ70_06265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06290 PF02355 Protein export membrane protein DEJ70_06300 PF03900 Porphobilinogen deaminase, C-terminal domain DEJ70_06300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DEJ70_06305 PF01565 FAD binding domain DEJ70_06305 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DEJ70_06310 PF00375 Sodium:dicarboxylate symporter family DEJ70_06315 PF00156 Phosphoribosyl transferase domain DEJ70_06335 PF03120 NAD-dependent DNA ligase OB-fold domain DEJ70_06335 PF00533 BRCA1 C Terminus (BRCT) domain DEJ70_06335 PF01653 NAD-dependent DNA ligase adenylation domain DEJ70_06335 PF12826 Helix-hairpin-helix motif DEJ70_06370 PF07478 D-ala D-ala ligase C-terminus DEJ70_06370 PF01820 D-ala D-ala ligase N-terminus DEJ70_06390 PF11953 Domain of unknown function (DUF3470) DEJ70_06390 PF00037 4Fe-4S binding domain DEJ70_06395 PF02481 DNA recombination-mediator protein A DEJ70_06395 PF17782 DprA winged helix domain DEJ70_06415 PF07516 SecA Wing and Scaffold domain DEJ70_06415 PF01043 SecA preprotein cross-linking domain DEJ70_06415 PF07517 SecA DEAD-like domain DEJ70_06415 PF02810 SEC-C motif DEJ70_06435 PF02646 RmuC family DEJ70_06440 PF07943 Penicillin-binding protein 5, C-terminal domain DEJ70_06440 PF00768 D-alanyl-D-alanine carboxypeptidase DEJ70_06445 PF04002 RadC-like JAB domain DEJ70_06460 PF01578 Cytochrome C assembly protein DEJ70_06460 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DEJ70_06470 PF01624 MutS domain I DEJ70_06470 PF05190 MutS family domain IV DEJ70_06470 PF05188 MutS domain II DEJ70_06470 PF00488 MutS domain V DEJ70_06470 PF05192 MutS domain III DEJ70_06480 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06505 PF00571 CBS domain DEJ70_06505 PF01769 Divalent cation transporter DEJ70_06505 PF03448 MgtE intracellular N domain DEJ70_06525 PF01479 S4 domain DEJ70_06525 PF00849 RNA pseudouridylate synthase DEJ70_06530 PF08946 Osmosensory transporter coiled coil DEJ70_06530 PF00083 Sugar (and other) transporter DEJ70_06550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06565 PF02938 GAD domain DEJ70_06565 PF00152 tRNA synthetases class II (D, K and N) DEJ70_06565 PF01336 OB-fold nucleic acid binding domain DEJ70_06580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06600 PF08946 Osmosensory transporter coiled coil DEJ70_06600 PF00083 Sugar (and other) transporter DEJ70_06605 PF01479 S4 domain DEJ70_06605 PF00849 RNA pseudouridylate synthase DEJ70_06625 PF01769 Divalent cation transporter DEJ70_06625 PF03448 MgtE intracellular N domain DEJ70_06625 PF00571 CBS domain DEJ70_06635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06715 PF04002 RadC-like JAB domain DEJ70_06740 PF13091 PLD-like domain DEJ70_06765 PF10531 SLBB domain DEJ70_06765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DEJ70_06765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DEJ70_06770 PF00707 Translation initiation factor IF-3, C-terminal domain DEJ70_06770 PF05198 Translation initiation factor IF-3, N-terminal domain DEJ70_06775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEJ70_06775 PF03129 Anticodon binding domain DEJ70_06775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEJ70_06785 PF12838 4Fe-4S dicluster domain DEJ70_06790 PF10396 GTP-binding protein TrmE N-terminus DEJ70_06790 PF12631 MnmE helical domain DEJ70_06790 PF01926 50S ribosome-binding GTPase DEJ70_06800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEJ70_06815 PF00953 Glycosyl transferase family 4 DEJ70_06820 PF01351 Ribonuclease HII DEJ70_06840 PF02769 AIR synthase related protein, C-terminal domain DEJ70_06840 PF00586 AIR synthase related protein, N-terminal domain DEJ70_06845 PF01259 SAICAR synthetase DEJ70_06850 PF01746 tRNA (Guanine-1)-methyltransferase DEJ70_06855 PF01245 Ribosomal protein L19 DEJ70_06860 PF00528 Binding-protein-dependent transport system inner membrane component DEJ70_06875 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DEJ70_06875 PF01243 Pyridoxamine 5'-phosphate oxidase DEJ70_06880 PF06827 Zinc finger found in FPG and IleRS DEJ70_06880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DEJ70_06880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DEJ70_06915 PF10609 NUBPL iron-transfer P-loop NTPase DEJ70_06930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_06970 PF01098 Cell cycle protein DEJ70_06975 PF00266 Aminotransferase class-V DEJ70_07000 PF01381 Helix-turn-helix DEJ70_07000 PF08671 Anti-repressor SinI DEJ70_07005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_07015 PF04002 RadC-like JAB domain DEJ70_07020 PF01381 Helix-turn-helix DEJ70_07025 PF01119 DNA mismatch repair protein, C-terminal domain DEJ70_07025 PF08676 MutL C terminal dimerisation domain DEJ70_07035 PF12804 MobA-like NTP transferase domain DEJ70_07035 PF14602 Hexapeptide repeat of succinyl-transferase DEJ70_07035 PF00132 Bacterial transferase hexapeptide (six repeats) DEJ70_07040 PF01370 NAD dependent epimerase/dehydratase family DEJ70_07060 PF00664 ABC transporter transmembrane region DEJ70_07060 PF00005 ABC transporter DEJ70_07065 PF01212 Beta-eliminating lyase DEJ70_07070 PF01212 Beta-eliminating lyase DEJ70_07080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DEJ70_07080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DEJ70_07080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DEJ70_07085 PF00892 EamA-like transporter family DEJ70_07110 PF01523 Putative modulator of DNA gyrase DEJ70_07115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DEJ70_07115 PF00355 Rieske [2Fe-2S] domain DEJ70_07120 PF03989 DNA gyrase C-terminal domain, beta-propeller DEJ70_07120 PF00521 DNA gyrase/topoisomerase IV, subunit A DEJ70_07140 PF02632 BioY family DEJ70_07145 PF00881 Nitroreductase family DEJ70_07155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEJ70_07170 PF03471 Transporter associated domain DEJ70_07170 PF00571 CBS domain