locus-tag class description IYZ83_000015 PF00120 Glutamine synthetase, catalytic domain IYZ83_000020 PF00308 Bacterial dnaA protein IYZ83_000020 PF08299 Bacterial dnaA protein helix-turn-helix IYZ83_000020 PF11638 DnaA N-terminal domain IYZ83_000025 PF07549 SecD/SecF GG Motif IYZ83_000025 PF02355 Protein export membrane protein IYZ83_000050 PF00115 Cytochrome C and Quinol oxidase polypeptide I IYZ83_000070 PF13525 Outer membrane lipoprotein IYZ83_000075 PF01709 Transcriptional regulator IYZ83_000080 PF01476 LysM domain IYZ83_000080 PF08525 Opacity-associated protein A N-terminal motif IYZ83_000080 PF01551 Peptidase family M23 IYZ83_000105 PF01029 NusB family IYZ83_000110 PF00885 6,7-dimethyl-8-ribityllumazine synthase IYZ83_000115 PF02096 60Kd inner membrane protein IYZ83_000115 PF14849 YidC periplasmic domain IYZ83_000135 PF14437 MafB19-like deaminase IYZ83_000145 PF06418 CTP synthase N-terminus IYZ83_000145 PF00117 Glutamine amidotransferase class-I IYZ83_000155 PF00132 Bacterial transferase hexapeptide (six repeats) IYZ83_000155 PF00101 Ribulose bisphosphate carboxylase, small chain IYZ83_000165 PF01131 DNA topoisomerase IYZ83_000165 PF01751 Toprim domain IYZ83_000165 PF13368 Topoisomerase C-terminal repeat IYZ83_000165 PF01396 Topoisomerase DNA binding C4 zinc finger IYZ83_000175 PF13333 Integrase core domain IYZ83_000175 PF00665 Integrase core domain IYZ83_000175 PF13276 HTH-like domain IYZ83_000190 PF02534 Type IV secretory system Conjugative DNA transfer IYZ83_000195 PF00437 Type II/IV secretion system protein IYZ83_000210 PF04335 VirB8 protein IYZ83_000215 PF00925 GTP cyclohydrolase II IYZ83_000235 PF11953 Domain of unknown function (DUF3470) IYZ83_000235 PF00037 4Fe-4S binding domain IYZ83_000240 PF02481 DNA recombination-mediator protein A IYZ83_000260 PF17864 RuvB AAA lid domain IYZ83_000260 PF05491 RuvB C-terminal winged helix domain IYZ83_000260 PF05496 Holliday junction DNA helicase RuvB P-loop domain IYZ83_000265 PF07499 RuvA, C-terminal domain IYZ83_000265 PF01330 RuvA N terminal domain IYZ83_000270 PF00034 Cytochrome c IYZ83_000280 PF00580 UvrD/REP helicase N-terminal domain IYZ83_000280 PF13361 UvrD-like helicase C-terminal domain IYZ83_000290 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IYZ83_000295 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IYZ83_000300 PF00361 Proton-conducting membrane transporter IYZ83_000300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYZ83_000305 PF00361 Proton-conducting membrane transporter IYZ83_000310 PF00361 Proton-conducting membrane transporter IYZ83_000335 PF02237 Biotin protein ligase C terminal domain IYZ83_000335 PF03099 Biotin/lipoate A/B protein ligase family IYZ83_000335 PF08279 HTH domain IYZ83_000340 PF03100 CcmE IYZ83_000380 PF10531 SLBB domain IYZ83_000380 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IYZ83_000380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IYZ83_000385 PF00707 Translation initiation factor IF-3, C-terminal domain IYZ83_000385 PF05198 Translation initiation factor IF-3, N-terminal domain IYZ83_000390 PF03129 Anticodon binding domain IYZ83_000390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYZ83_000390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IYZ83_000395 PF12838 4Fe-4S dicluster domain IYZ83_000400 PF01926 50S ribosome-binding GTPase IYZ83_000400 PF12631 MnmE helical domain IYZ83_000400 PF10396 GTP-binding protein TrmE N-terminus IYZ83_000410 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_000430 PF01926 50S ribosome-binding GTPase IYZ83_000430 PF07650 KH domain IYZ83_000445 PF00692 dUTPase IYZ83_000460 PF01192 RNA polymerase Rpb6 IYZ83_000470 PF03334 Na+/H+ antiporter subunit IYZ83_000475 PF13244 Domain of unknown function (DUF4040) IYZ83_000475 PF00361 Proton-conducting membrane transporter IYZ83_000475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYZ83_000485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IYZ83_000490 PF04539 Sigma-70 region 3 IYZ83_000490 PF04546 Sigma-70, non-essential region IYZ83_000490 PF03979 Sigma-70 factor, region 1.1 IYZ83_000490 PF00140 Sigma-70 factor, region 1.2 IYZ83_000490 PF04542 Sigma-70 region 2 IYZ83_000490 PF04545 Sigma-70, region 4 IYZ83_000505 PF00202 Aminotransferase class-III IYZ83_000510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYZ83_000510 PF00512 His Kinase A (phospho-acceptor) domain IYZ83_000510 PF00989 PAS fold IYZ83_000510 PF13188 PAS domain IYZ83_000510 PF13426 PAS domain IYZ83_000520 PF00814 Glycoprotease family IYZ83_000535 PF17755 UvrA DNA-binding domain IYZ83_000535 PF17760 UvrA interaction domain IYZ83_000550 PF04101 Glycosyltransferase family 28 C-terminal domain IYZ83_000550 PF03033 Glycosyltransferase family 28 N-terminal domain IYZ83_000555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IYZ83_000555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IYZ83_000560 PF00578 AhpC/TSA family IYZ83_000565 PF02463 RecF/RecN/SMC N terminal domain IYZ83_000585 PF00529 HlyD membrane-fusion protein of T1SS IYZ83_000585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYZ83_000590 PF00462 Glutaredoxin IYZ83_000600 PF00390 Malic enzyme, N-terminal domain IYZ83_000600 PF03949 Malic enzyme, NAD binding domain IYZ83_000600 PF01515 Phosphate acetyl/butaryl transferase IYZ83_000605 PF01066 CDP-alcohol phosphatidyltransferase IYZ83_000615 PF01297 Zinc-uptake complex component A periplasmic IYZ83_000620 PF00005 ABC transporter IYZ83_000625 PF03109 ABC1 family IYZ83_000670 PF03129 Anticodon binding domain IYZ83_000670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYZ83_000675 PF01648 4'-phosphopantetheinyl transferase superfamily IYZ83_000690 PF00830 Ribosomal L28 family IYZ83_000695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IYZ83_000695 PF04055 Radical SAM superfamily IYZ83_000770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IYZ83_000775 PF02511 Thymidylate synthase complementing protein IYZ83_000820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IYZ83_000820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IYZ83_000820 PF13288 DXP reductoisomerase C-terminal domain IYZ83_000840 PF00731 AIR carboxylase IYZ83_000845 PF01119 DNA mismatch repair protein, C-terminal domain IYZ83_000845 PF08676 MutL C terminal dimerisation domain IYZ83_000850 PF01145 SPFH domain / Band 7 family IYZ83_000855 PF01145 SPFH domain / Band 7 family IYZ83_000860 PF13180 PDZ domain IYZ83_000875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IYZ83_000875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IYZ83_000875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IYZ83_000880 PF00892 EamA-like transporter family IYZ83_000890 PF01594 AI-2E family transporter IYZ83_000900 PF02899 Phage integrase, N-terminal SAM-like domain IYZ83_000900 PF00589 Phage integrase family IYZ83_000910 PF01649 Ribosomal protein S20 IYZ83_000915 PF00285 Citrate synthase, C-terminal domain IYZ83_000935 PF01541 GIY-YIG catalytic domain IYZ83_000945 PF05190 MutS family domain IV IYZ83_000945 PF05192 MutS domain III IYZ83_000945 PF00488 MutS domain V IYZ83_000945 PF01624 MutS domain I IYZ83_000945 PF05188 MutS domain II IYZ83_000955 PF02938 GAD domain IYZ83_000955 PF00152 tRNA synthetases class II (D, K and N) IYZ83_000955 PF01336 OB-fold nucleic acid binding domain IYZ83_000960 PF08946 Osmosensory transporter coiled coil IYZ83_000960 PF00083 Sugar (and other) transporter IYZ83_000965 PF00849 RNA pseudouridylate synthase IYZ83_000965 PF01479 S4 domain IYZ83_001000 PF00571 CBS domain IYZ83_001000 PF01769 Divalent cation transporter IYZ83_001000 PF03448 MgtE intracellular N domain IYZ83_001010 PF00085 Thioredoxin IYZ83_001025 PF00005 ABC transporter IYZ83_001030 PF01113 Dihydrodipicolinate reductase, N-terminus IYZ83_001030 PF05173 Dihydrodipicolinate reductase, C-terminus IYZ83_001075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IYZ83_001090 PF08264 Anticodon-binding domain of tRNA IYZ83_001090 PF00133 tRNA synthetases class I (I, L, M and V) IYZ83_001105 PF00348 Polyprenyl synthetase IYZ83_001110 PF00550 Phosphopantetheine attachment site IYZ83_001115 PF00109 Beta-ketoacyl synthase, N-terminal domain IYZ83_001115 PF02801 Beta-ketoacyl synthase, C-terminal domain IYZ83_001130 PF02632 BioY family IYZ83_001150 PF03989 DNA gyrase C-terminal domain, beta-propeller IYZ83_001150 PF00521 DNA gyrase/topoisomerase IV, subunit A IYZ83_001155 PF00355 Rieske [2Fe-2S] domain IYZ83_001155 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IYZ83_001160 PF13333 Integrase core domain IYZ83_001160 PF13276 HTH-like domain IYZ83_001160 PF00665 Integrase core domain IYZ83_001185 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_001185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IYZ83_001190 PF02899 Phage integrase, N-terminal SAM-like domain IYZ83_001190 PF00589 Phage integrase family IYZ83_001195 PF02934 GatB/GatE catalytic domain IYZ83_001195 PF02637 GatB domain IYZ83_001200 PF00676 Dehydrogenase E1 component IYZ83_001205 PF03653 Uncharacterised protein family (UPF0093) IYZ83_001210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYZ83_001210 PF00529 HlyD membrane-fusion protein of T1SS IYZ83_001215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IYZ83_001215 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IYZ83_001220 PF00115 Cytochrome C and Quinol oxidase polypeptide I IYZ83_001225 PF01040 UbiA prenyltransferase family IYZ83_001230 PF00075 RNase H IYZ83_001245 PF09190 DALR domain IYZ83_001245 PF01406 tRNA synthetases class I (C) catalytic domain IYZ83_001250 PF06055 Exopolysaccharide synthesis, ExoD IYZ83_001255 PF02416 mttA/Hcf106 family IYZ83_001260 PF00005 ABC transporter IYZ83_001275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IYZ83_001285 PF01926 50S ribosome-binding GTPase IYZ83_001285 PF06071 Protein of unknown function (DUF933) IYZ83_001310 PF03330 Lytic transglycolase IYZ83_001315 PF01225 Mur ligase family, catalytic domain IYZ83_001315 PF08245 Mur ligase middle domain IYZ83_001315 PF02875 Mur ligase family, glutamate ligase domain IYZ83_001340 PF07690 Major Facilitator Superfamily IYZ83_001345 PF01494 FAD binding domain IYZ83_001365 PF12627 Probable RNA and SrmB- binding site of polymerase A IYZ83_001365 PF01743 Poly A polymerase head domain IYZ83_001365 PF13735 tRNA nucleotidyltransferase domain 2 putative IYZ83_001370 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IYZ83_001370 PF14572 Phosphoribosyl synthetase-associated domain IYZ83_001375 PF02686 Glu-tRNAGln amidotransferase C subunit IYZ83_001380 PF07676 WD40-like Beta Propeller Repeat IYZ83_001385 PF17770 Ribonuclease J C-terminal domain IYZ83_001385 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IYZ83_001385 PF12706 Beta-lactamase superfamily domain IYZ83_001390 PF00684 DnaJ central domain IYZ83_001390 PF01556 DnaJ C terminal domain IYZ83_001390 PF00226 DnaJ domain IYZ83_001400 PF00586 AIR synthase related protein, N-terminal domain IYZ83_001400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IYZ83_001400 PF02769 AIR synthase related protein, C-terminal domain IYZ83_001425 PF00849 RNA pseudouridylate synthase IYZ83_001425 PF01479 S4 domain IYZ83_001440 PF00709 Adenylosuccinate synthetase IYZ83_001470 PF01380 SIS domain IYZ83_001475 PF02699 Preprotein translocase subunit IYZ83_001485 PF00318 Ribosomal protein S2 IYZ83_001490 PF00889 Elongation factor TS IYZ83_001495 PF00696 Amino acid kinase family IYZ83_001500 PF01765 Ribosome recycling factor IYZ83_001515 PF02545 Maf-like protein IYZ83_001520 PF01176 Translation initiation factor 1A / IF-1 IYZ83_001545 PF03099 Biotin/lipoate A/B protein ligase family IYZ83_001550 PF17676 LD-carboxypeptidase C-terminal domain IYZ83_001550 PF02016 LD-carboxypeptidase N-terminal domain IYZ83_001560 PF00216 Bacterial DNA-binding protein IYZ83_001565 PF13411 MerR HTH family regulatory protein IYZ83_001570 PF01551 Peptidase family M23 IYZ83_001575 PF08264 Anticodon-binding domain of tRNA IYZ83_001575 PF09334 tRNA synthetases class I (M) IYZ83_001575 PF13603 Leucyl-tRNA synthetase, Domain 2 IYZ83_001575 PF00133 tRNA synthetases class I (I, L, M and V) IYZ83_001590 PF01235 Sodium:alanine symporter family IYZ83_001610 PF00118 TCP-1/cpn60 chaperonin family IYZ83_001615 PF00166 Chaperonin 10 Kd subunit IYZ83_001620 PF01571 Aminomethyltransferase folate-binding domain IYZ83_001625 PF12796 Ankyrin repeats (3 copies) IYZ83_001640 PF00268 Ribonucleotide reductase, small chain IYZ83_001655 PF11967 Recombination protein O N terminal IYZ83_001655 PF02565 Recombination protein O C terminal IYZ83_001660 PF00072 Response regulator receiver domain IYZ83_001660 PF00990 Diguanylate cyclase, GGDEF domain IYZ83_001670 PF05088 Bacterial NAD-glutamate dehydrogenase IYZ83_001675 PF00004 ATPase family associated with various cellular activities (AAA) IYZ83_001675 PF17871 AAA lid domain IYZ83_001675 PF02861 Clp amino terminal domain, pathogenicity island component IYZ83_001675 PF07724 AAA domain (Cdc48 subfamily) IYZ83_001675 PF10431 C-terminal, D2-small domain, of ClpB protein IYZ83_001695 PF13416 Bacterial extracellular solute-binding protein IYZ83_001700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IYZ83_001700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IYZ83_001715 PF00625 Guanylate kinase IYZ83_001725 PF02910 Fumarate reductase flavoprotein C-term IYZ83_001725 PF00890 FAD binding domain IYZ83_001740 PF00132 Bacterial transferase hexapeptide (six repeats) IYZ83_001740 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IYZ83_001740 PF14602 Hexapeptide repeat of succinyl-transferase IYZ83_001765 PF00471 Ribosomal protein L33 IYZ83_001770 PF12111 Polyribonucleotide phosphorylase C terminal IYZ83_001770 PF10150 Ribonuclease E/G family IYZ83_001770 PF00575 S1 RNA binding domain IYZ83_001775 PF00012 Hsp70 protein IYZ83_001780 PF01722 BolA-like protein IYZ83_001785 PF01053 Cys/Met metabolism PLP-dependent enzyme IYZ83_001790 PF02875 Mur ligase family, glutamate ligase domain IYZ83_001790 PF08245 Mur ligase middle domain IYZ83_001805 PF01300 Telomere recombination IYZ83_001810 PF09115 DNA polymerase III, delta subunit, C terminal IYZ83_001825 PF13244 Domain of unknown function (DUF4040) IYZ83_001825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYZ83_001825 PF00361 Proton-conducting membrane transporter IYZ83_001830 PF03796 DnaB-like helicase C terminal domain IYZ83_001830 PF00772 DnaB-like helicase N terminal domain IYZ83_001840 PF06271 RDD family IYZ83_001870 PF02660 Glycerol-3-phosphate acyltransferase IYZ83_001875 PF01235 Sodium:alanine symporter family IYZ83_001900 PF10417 C-terminal domain of 1-Cys peroxiredoxin IYZ83_001900 PF00578 AhpC/TSA family IYZ83_001905 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_001930 PF00033 Cytochrome b/b6/petB IYZ83_001930 PF00032 Cytochrome b(C-terminal)/b6/petD IYZ83_001935 PF00032 Cytochrome b(C-terminal)/b6/petD IYZ83_001935 PF02167 Cytochrome C1 family IYZ83_001935 PF00033 Cytochrome b/b6/petB IYZ83_001940 PF04851 Type III restriction enzyme, res subunit IYZ83_001940 PF02151 UvrB/uvrC motif IYZ83_001940 PF12344 Ultra-violet resistance protein B IYZ83_001940 PF17757 UvrB interaction domain IYZ83_001940 PF00271 Helicase conserved C-terminal domain IYZ83_001955 PF00121 Triosephosphate isomerase IYZ83_001960 PF08245 Mur ligase middle domain IYZ83_001975 PF13840 ACT domain IYZ83_001975 PF01842 ACT domain IYZ83_001975 PF00696 Amino acid kinase family IYZ83_001980 PF02254 TrkA-N domain IYZ83_001980 PF00999 Sodium/hydrogen exchanger family IYZ83_001990 PF02223 Thymidylate kinase IYZ83_002005 PF00923 Transaldolase/Fructose-6-phosphate aldolase IYZ83_002050 PF00364 Biotin-requiring enzyme IYZ83_002050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IYZ83_002050 PF02817 e3 binding domain IYZ83_002070 PF02540 NAD synthase IYZ83_002070 PF00958 GMP synthase C terminal domain IYZ83_002070 PF00117 Glutamine amidotransferase class-I IYZ83_002075 PF03741 Integral membrane protein TerC family IYZ83_002075 PF03471 Transporter associated domain IYZ83_002105 PF01255 Putative undecaprenyl diphosphate synthase IYZ83_002120 PF01467 Cytidylyltransferase-like IYZ83_002190 PF02646 RmuC family IYZ83_002195 PF00768 D-alanyl-D-alanine carboxypeptidase IYZ83_002195 PF07943 Penicillin-binding protein 5, C-terminal domain IYZ83_002215 PF00156 Phosphoribosyl transferase domain IYZ83_002220 PF00375 Sodium:dicarboxylate symporter family IYZ83_002230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IYZ83_002230 PF01565 FAD binding domain IYZ83_002235 PF03900 Porphobilinogen deaminase, C-terminal domain IYZ83_002235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IYZ83_002245 PF02355 Protein export membrane protein IYZ83_002255 PF00919 Uncharacterized protein family UPF0004 IYZ83_002255 PF04055 Radical SAM superfamily IYZ83_002285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IYZ83_002290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IYZ83_002300 PF01050 Mannose-6-phosphate isomerase IYZ83_002300 PF00483 Nucleotidyl transferase IYZ83_002335 PF00361 Proton-conducting membrane transporter IYZ83_002340 PF01098 Cell cycle protein IYZ83_002345 PF00266 Aminotransferase class-V IYZ83_002395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IYZ83_002395 PF01676 Metalloenzyme superfamily IYZ83_002405 PF00271 Helicase conserved C-terminal domain IYZ83_002405 PF17191 RecG wedge domain IYZ83_002405 PF00270 DEAD/DEAH box helicase IYZ83_002415 PF00444 Ribosomal protein L36 IYZ83_002420 PF03618 Kinase/pyrophosphorylase IYZ83_002425 PF01578 Cytochrome C assembly protein IYZ83_002470 PF00317 Ribonucleotide reductase, all-alpha domain IYZ83_002470 PF03477 ATP cone domain IYZ83_002470 PF02867 Ribonucleotide reductase, barrel domain IYZ83_002475 PF03652 Holliday junction resolvase IYZ83_002490 PF00009 Elongation factor Tu GTP binding domain IYZ83_002490 PF06421 GTP-binding protein LepA C-terminus IYZ83_002490 PF03144 Elongation factor Tu domain 2 IYZ83_002490 PF14492 Elongation Factor G, domain II IYZ83_002490 PF00679 Elongation factor G C-terminus IYZ83_002500 PF00462 Glutaredoxin IYZ83_002505 PF06574 FAD synthetase IYZ83_002505 PF01687 Riboflavin kinase IYZ83_002510 PF01252 Signal peptidase (SPase) II IYZ83_002515 PF05193 Peptidase M16 inactive domain IYZ83_002515 PF00675 Insulinase (Peptidase family M16) IYZ83_002525 PF00551 Formyl transferase IYZ83_002545 PF01668 SmpB protein IYZ83_002550 PF01790 Prolipoprotein diacylglyceryl transferase IYZ83_002565 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IYZ83_002575 PF01509 TruB family pseudouridylate synthase (N terminal domain) IYZ83_002575 PF16198 tRNA pseudouridylate synthase B C-terminal domain IYZ83_002580 PF00312 Ribosomal protein S15 IYZ83_002585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IYZ83_002585 PF00013 KH domain IYZ83_002585 PF03725 3' exoribonuclease family, domain 2 IYZ83_002585 PF01138 3' exoribonuclease family, domain 1 IYZ83_002585 PF00575 S1 RNA binding domain IYZ83_002590 PF00834 Ribulose-phosphate 3 epimerase family IYZ83_002605 PF00162 Phosphoglycerate kinase IYZ83_002610 PF00464 Serine hydroxymethyltransferase IYZ83_002625 PF00893 Small Multidrug Resistance protein IYZ83_002630 PF00155 Aminotransferase class I and II IYZ83_002635 PF01208 Uroporphyrinogen decarboxylase (URO-D) IYZ83_002640 PF03471 Transporter associated domain IYZ83_002640 PF00571 CBS domain IYZ83_002655 PF16870 2-oxoglutarate dehydrogenase C-terminal IYZ83_002655 PF02779 Transketolase, pyrimidine binding domain IYZ83_002655 PF00676 Dehydrogenase E1 component IYZ83_002655 PF16078 2-oxoglutarate dehydrogenase N-terminus IYZ83_002660 PF00004 ATPase family associated with various cellular activities (AAA) IYZ83_002660 PF17862 AAA+ lid domain IYZ83_002660 PF06480 FtsH Extracellular IYZ83_002660 PF01434 Peptidase family M41 IYZ83_002675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IYZ83_002675 PF02817 e3 binding domain IYZ83_002675 PF00364 Biotin-requiring enzyme IYZ83_002720 PF03129 Anticodon binding domain IYZ83_002720 PF13393 Histidyl-tRNA synthetase IYZ83_002725 PF01975 Survival protein SurE IYZ83_002745 PF13520 Amino acid permease IYZ83_002750 PF00324 Amino acid permease IYZ83_002760 PF02774 Semialdehyde dehydrogenase, dimerisation domain IYZ83_002760 PF01118 Semialdehyde dehydrogenase, NAD binding domain IYZ83_002765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IYZ83_002765 PF02222 ATP-grasp domain IYZ83_002780 PF00083 Sugar (and other) transporter IYZ83_002780 PF07690 Major Facilitator Superfamily IYZ83_002785 PF18073 Rubredoxin metal binding domain IYZ83_002795 PF00206 Lyase IYZ83_002795 PF10415 Fumarase C C-terminus IYZ83_002805 PF00579 tRNA synthetases class I (W and Y) IYZ83_002810 PF01025 GrpE IYZ83_002815 PF00348 Polyprenyl synthetase IYZ83_002820 PF00886 Ribosomal protein S16 IYZ83_002835 PF00664 ABC transporter transmembrane region IYZ83_002835 PF00005 ABC transporter IYZ83_002840 PF00730 HhH-GPD superfamily base excision DNA repair protein IYZ83_002840 PF00633 Helix-hairpin-helix motif IYZ83_002840 PF10576 Iron-sulfur binding domain of endonuclease III IYZ83_002880 PF00478 IMP dehydrogenase / GMP reductase domain IYZ83_002880 PF00571 CBS domain IYZ83_002885 PF07497 Rho termination factor, RNA-binding domain IYZ83_002885 PF07498 Rho termination factor, N-terminal domain IYZ83_002885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYZ83_002900 PF07690 Major Facilitator Superfamily IYZ83_002905 PF01212 Beta-eliminating lyase IYZ83_002910 PF01212 Beta-eliminating lyase IYZ83_002915 PF00664 ABC transporter transmembrane region IYZ83_002915 PF00005 ABC transporter IYZ83_002935 PF01370 NAD dependent epimerase/dehydratase family IYZ83_002940 PF12804 MobA-like NTP transferase domain IYZ83_002940 PF14602 Hexapeptide repeat of succinyl-transferase IYZ83_002940 PF00132 Bacterial transferase hexapeptide (six repeats) IYZ83_002965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYZ83_002965 PF01751 Toprim domain IYZ83_002965 PF00986 DNA gyrase B subunit, carboxyl terminus IYZ83_002965 PF00204 DNA gyrase B IYZ83_002970 PF01425 Amidase IYZ83_002975 PF00476 DNA polymerase family A IYZ83_002975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IYZ83_002975 PF01367 5'-3' exonuclease, C-terminal SAM fold IYZ83_002985 PF08676 MutL C terminal dimerisation domain IYZ83_002985 PF01119 DNA mismatch repair protein, C-terminal domain IYZ83_003000 PF01513 ATP-NAD kinase IYZ83_003005 PF01197 Ribosomal protein L31 IYZ83_003010 PF00698 Acyl transferase domain IYZ83_003015 PF02272 DHHA1 domain IYZ83_003015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IYZ83_003015 PF01411 tRNA synthetases class II (A) IYZ83_003045 PF01632 Ribosomal protein L35 IYZ83_003050 PF00453 Ribosomal protein L20 IYZ83_003055 PF02911 Formyl transferase, C-terminal domain IYZ83_003055 PF00551 Formyl transferase IYZ83_003065 PF02142 MGS-like domain IYZ83_003065 PF01808 AICARFT/IMPCHase bienzyme IYZ83_003075 PF18324 Hypothetical protein TT1725 IYZ83_003075 PF00180 Isocitrate/isopropylmalate dehydrogenase IYZ83_003085 PF02844 Phosphoribosylglycinamide synthetase, N domain IYZ83_003085 PF02843 Phosphoribosylglycinamide synthetase, C domain IYZ83_003085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IYZ83_003090 PF02403 Seryl-tRNA synthetase N-terminal domain IYZ83_003090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYZ83_003100 PF01207 Dihydrouridine synthase (Dus) IYZ83_003105 PF04997 RNA polymerase Rpb1, domain 1 IYZ83_003105 PF00623 RNA polymerase Rpb1, domain 2 IYZ83_003105 PF04560 RNA polymerase Rpb2, domain 7 IYZ83_003105 PF00562 RNA polymerase Rpb2, domain 6 IYZ83_003105 PF04565 RNA polymerase Rpb2, domain 3 IYZ83_003105 PF04561 RNA polymerase Rpb2, domain 2 IYZ83_003105 PF04563 RNA polymerase beta subunit IYZ83_003105 PF04998 RNA polymerase Rpb1, domain 5 IYZ83_003105 PF05000 RNA polymerase Rpb1, domain 4 IYZ83_003105 PF04983 RNA polymerase Rpb1, domain 3 IYZ83_003105 PF10385 RNA polymerase beta subunit external 1 domain IYZ83_003110 PF00542 Ribosomal protein L7/L12 C-terminal domain IYZ83_003110 PF16320 Ribosomal protein L7/L12 dimerisation domain IYZ83_003115 PF00466 Ribosomal protein L10 IYZ83_003120 PF00687 Ribosomal protein L1p/L10e family IYZ83_003125 PF03946 Ribosomal protein L11, N-terminal domain IYZ83_003125 PF00298 Ribosomal protein L11, RNA binding domain IYZ83_003130 PF00467 KOW motif IYZ83_003130 PF02357 Transcription termination factor nusG IYZ83_003155 PF03144 Elongation factor Tu domain 2 IYZ83_003155 PF00009 Elongation factor Tu GTP binding domain IYZ83_003155 PF03764 Elongation factor G, domain IV IYZ83_003155 PF14492 Elongation Factor G, domain II IYZ83_003155 PF00679 Elongation factor G C-terminus IYZ83_003160 PF00177 Ribosomal protein S7p/S5e IYZ83_003165 PF00164 Ribosomal protein S12/S23 IYZ83_003170 PF17827 PrmC N-terminal domain IYZ83_003170 PF05175 Methyltransferase small domain IYZ83_003170 PF02390 Putative methyltransferase IYZ83_003180 PF04972 BON domain IYZ83_003190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYZ83_003190 PF05697 Bacterial trigger factor protein (TF) IYZ83_003190 PF05698 Bacterial trigger factor protein (TF) C-terminus IYZ83_003195 PF00574 Clp protease IYZ83_003200 PF10431 C-terminal, D2-small domain, of ClpB protein IYZ83_003200 PF06689 ClpX C4-type zinc finger IYZ83_003200 PF07724 AAA domain (Cdc48 subfamily) IYZ83_003205 PF05362 Lon protease (S16) C-terminal proteolytic domain IYZ83_003205 PF02190 ATP-dependent protease La (LON) substrate-binding domain IYZ83_003205 PF00004 ATPase family associated with various cellular activities (AAA) IYZ83_003210 PF00905 Penicillin binding protein transpeptidase domain IYZ83_003210 PF03717 Penicillin-binding Protein dimerisation domain IYZ83_003215 PF01522 Polysaccharide deacetylase IYZ83_003220 PF04002 RadC-like JAB domain IYZ83_003240 PF01078 Magnesium chelatase, subunit ChlI IYZ83_003240 PF13335 Magnesium chelatase, subunit ChlI C-terminal IYZ83_003255 PF02091 Glycyl-tRNA synthetase alpha subunit IYZ83_003260 PF05746 DALR anticodon binding domain IYZ83_003260 PF02092 Glycyl-tRNA synthetase beta subunit IYZ83_003265 PF01541 GIY-YIG catalytic domain IYZ83_003265 PF02151 UvrB/uvrC motif IYZ83_003265 PF08459 UvrC Helix-hairpin-helix N-terminal IYZ83_003275 PF08032 RNA 2'-O ribose methyltransferase substrate binding IYZ83_003275 PF00588 SpoU rRNA Methylase family IYZ83_003285 PF00665 Integrase core domain IYZ83_003285 PF13276 HTH-like domain IYZ83_003285 PF13333 Integrase core domain IYZ83_003295 PF00486 Transcriptional regulatory protein, C terminal IYZ83_003295 PF00072 Response regulator receiver domain IYZ83_003300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IYZ83_003300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IYZ83_003320 PF13085 2Fe-2S iron-sulfur cluster binding domain IYZ83_003325 PF02130 Uncharacterized protein family UPF0054 IYZ83_003340 PF12327 FtsZ family, C-terminal domain IYZ83_003340 PF00091 Tubulin/FtsZ family, GTPase domain IYZ83_003345 PF01171 PP-loop family IYZ83_003350 PF00691 OmpA family IYZ83_003380 PF00719 Inorganic pyrophosphatase IYZ83_003390 PF09312 SurA N-terminal domain IYZ83_003395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_003420 PF02401 LytB protein IYZ83_003450 PF00436 Single-strand binding protein family IYZ83_003455 PF00701 Dihydrodipicolinate synthetase family IYZ83_003460 PF08240 Alcohol dehydrogenase GroES-like domain IYZ83_003460 PF00107 Zinc-binding dehydrogenase IYZ83_003470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IYZ83_003475 PF01027 Inhibitor of apoptosis-promoting Bax1 IYZ83_003480 PF00266 Aminotransferase class-V IYZ83_003485 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IYZ83_003490 PF00005 ABC transporter IYZ83_003495 PF01521 Iron-sulphur cluster biosynthesis IYZ83_003500 PF01966 HD domain IYZ83_003500 PF13286 Phosphohydrolase-associated domain IYZ83_003505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IYZ83_003505 PF01872 RibD C-terminal domain IYZ83_003540 PF01702 Queuine tRNA-ribosyltransferase IYZ83_003550 PF00675 Insulinase (Peptidase family M16) IYZ83_003550 PF05193 Peptidase M16 inactive domain IYZ83_003555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IYZ83_003555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IYZ83_003590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IYZ83_003590 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_003610 PF01791 DeoC/LacD family aldolase IYZ83_003625 PF01180 Dihydroorotate dehydrogenase IYZ83_003630 PF00035 Double-stranded RNA binding motif IYZ83_003630 PF14622 Ribonuclease-III-like IYZ83_003635 PF02630 SCO1/SenC IYZ83_003640 PF00929 Exonuclease IYZ83_003650 PF02556 Preprotein translocase subunit SecB IYZ83_003655 PF00694 Aconitase C-terminal domain IYZ83_003655 PF00330 Aconitase family (aconitate hydratase) IYZ83_003660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IYZ83_003660 PF14850 DNA-binding domain of Proline dehydrogenase IYZ83_003660 PF01619 Proline dehydrogenase IYZ83_003660 PF00171 Aldehyde dehydrogenase family IYZ83_003670 PF02789 Cytosol aminopeptidase family, N-terminal domain IYZ83_003670 PF00883 Cytosol aminopeptidase family, catalytic domain IYZ83_003685 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IYZ83_003685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IYZ83_003685 PF00384 Molybdopterin oxidoreductase IYZ83_003690 PF00146 NADH dehydrogenase IYZ83_003695 PF00490 Delta-aminolevulinic acid dehydratase IYZ83_003705 PF01921 tRNA synthetases class I (K) IYZ83_003715 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IYZ83_003720 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IYZ83_003725 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IYZ83_003735 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IYZ83_003755 PF01728 FtsJ-like methyltransferase IYZ83_003760 PF10691 Protein of unknown function (DUF2497) IYZ83_003770 PF00572 Ribosomal protein L13 IYZ83_003775 PF00380 Ribosomal protein S9/S16 IYZ83_003785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IYZ83_003790 PF00011 Hsp20/alpha crystallin family IYZ83_003820 PF01678 Diaminopimelate epimerase IYZ83_003825 PF02629 CoA binding domain IYZ83_003825 PF00549 CoA-ligase IYZ83_003830 PF08442 ATP-grasp domain IYZ83_003830 PF00549 CoA-ligase IYZ83_003845 PF04452 RNA methyltransferase IYZ83_003865 PF01218 Coproporphyrinogen III oxidase IYZ83_003870 PF00512 His Kinase A (phospho-acceptor) domain IYZ83_003870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYZ83_003870 PF13188 PAS domain IYZ83_003870 PF00072 Response regulator receiver domain IYZ83_003870 PF08448 PAS fold IYZ83_003875 PF13614 AAA domain IYZ83_003880 PF17762 HTH domain found in ParB protein IYZ83_003880 PF02195 ParB-like nuclease domain IYZ83_003885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IYZ83_003885 PF02542 YgbB family IYZ83_003900 PF00183 Hsp90 protein IYZ83_003915 PF00155 Aminotransferase class I and II IYZ83_003925 PF00677 Lumazine binding domain IYZ83_003935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IYZ83_003935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IYZ83_003935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IYZ83_003935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IYZ83_003945 PF00004 ATPase family associated with various cellular activities (AAA) IYZ83_003945 PF01434 Peptidase family M41 IYZ83_003945 PF17862 AAA+ lid domain IYZ83_003970 PF00557 Metallopeptidase family M24 IYZ83_003970 PF01321 Creatinase/Prolidase N-terminal domain IYZ83_003975 PF13932 GidA associated domain IYZ83_003975 PF01134 Glucose inhibited division protein A IYZ83_003990 PF03023 Lipid II flippase MurJ IYZ83_004025 PF18074 Primosomal protein N C-terminal domain IYZ83_004025 PF17764 3′ DNA-binding domain (3′BD) IYZ83_004025 PF00270 DEAD/DEAH box helicase IYZ83_004025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IYZ83_004035 PF00749 tRNA synthetases class I (E and Q), catalytic domain IYZ83_004045 PF18140 Propionyl-coenzyme A carboxylase BT domain IYZ83_004045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IYZ83_004045 PF00364 Biotin-requiring enzyme IYZ83_004045 PF00289 Biotin carboxylase, N-terminal domain IYZ83_004045 PF02785 Biotin carboxylase C-terminal domain IYZ83_004050 PF02628 Cytochrome oxidase assembly protein IYZ83_004070 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IYZ83_004070 PF01578 Cytochrome C assembly protein IYZ83_004095 PF00137 ATP synthase subunit C IYZ83_004100 PF00119 ATP synthase A chain IYZ83_004110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IYZ83_004110 PF01588 Putative tRNA binding domain IYZ83_004110 PF03147 Ferredoxin-fold anticodon binding domain IYZ83_004110 PF03484 tRNA synthetase B5 domain IYZ83_004110 PF03483 B3/4 domain IYZ83_004120 PF00133 tRNA synthetases class I (I, L, M and V) IYZ83_004120 PF08264 Anticodon-binding domain of tRNA IYZ83_004130 PF04055 Radical SAM superfamily IYZ83_004130 PF01938 TRAM domain IYZ83_004130 PF00919 Uncharacterized protein family UPF0004 IYZ83_004135 PF17768 RecJ OB domain IYZ83_004135 PF02272 DHHA1 domain IYZ83_004135 PF01368 DHH family IYZ83_004140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IYZ83_004150 PF03060 Nitronate monooxygenase IYZ83_004165 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IYZ83_004180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IYZ83_004180 PF07733 Bacterial DNA polymerase III alpha NTPase domain IYZ83_004180 PF02811 PHP domain IYZ83_004180 PF14579 Helix-hairpin-helix motif IYZ83_004185 PF01250 Ribosomal protein S6 IYZ83_004190 PF01084 Ribosomal protein S18 IYZ83_004195 PF01281 Ribosomal protein L9, N-terminal domain IYZ83_004195 PF03948 Ribosomal protein L9, C-terminal domain IYZ83_004200 PF00206 Lyase IYZ83_004200 PF10397 Adenylosuccinate lyase C-terminus IYZ83_004215 PF13685 Iron-containing alcohol dehydrogenase IYZ83_004220 PF01546 Peptidase family M20/M25/M40 IYZ83_004220 PF07687 Peptidase dimerisation domain IYZ83_004240 PF00117 Glutamine amidotransferase class-I IYZ83_004240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IYZ83_004260 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IYZ83_004260 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IYZ83_004265 PF02441 Flavoprotein IYZ83_004270 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) IYZ83_004275 PF01595 Cyclin M transmembrane N-terminal domain IYZ83_004275 PF03471 Transporter associated domain IYZ83_004275 PF00571 CBS domain IYZ83_004280 PF00202 Aminotransferase class-III IYZ83_004285 PF00334 Nucleoside diphosphate kinase IYZ83_004295 PF00762 Ferrochelatase IYZ83_004310 PF00227 Proteasome subunit IYZ83_004315 PF00004 ATPase family associated with various cellular activities (AAA) IYZ83_004315 PF07724 AAA domain (Cdc48 subfamily) IYZ83_004315 PF10431 C-terminal, D2-small domain, of ClpB protein IYZ83_004325 PF01545 Cation efflux family IYZ83_004360 PF00186 Dihydrofolate reductase IYZ83_004365 PF00809 Pterin binding enzyme IYZ83_004365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IYZ83_004370 PF02152 Dihydroneopterin aldolase IYZ83_004375 PF03070 TENA/THI-4/PQQC family IYZ83_004410 PF13333 Integrase core domain IYZ83_004410 PF00665 Integrase core domain IYZ83_004410 PF13276 HTH-like domain IYZ83_004435 PF01351 Ribonuclease HII IYZ83_004440 PF00953 Glycosyl transferase family 4 IYZ83_004450 PF02245 Methylpurine-DNA glycosylase (MPG) IYZ83_004460 PF04379 ApaG domain IYZ83_004465 PF00528 Binding-protein-dependent transport system inner membrane component IYZ83_004470 PF17773 UPF0176 acylphosphatase like domain IYZ83_004470 PF00581 Rhodanese-like domain IYZ83_004515 PF13662 Toprim domain IYZ83_004515 PF02132 RecR protein IYZ83_004535 PF01132 Elongation factor P (EF-P) OB domain IYZ83_004535 PF09285 Elongation factor P, C-terminal IYZ83_004535 PF08207 Elongation factor P (EF-P) KOW-like domain IYZ83_004540 PF05239 PRC-barrel domain IYZ83_004540 PF01782 RimM N-terminal domain IYZ83_004550 PF01926 50S ribosome-binding GTPase IYZ83_004550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IYZ83_004560 PF01039 Carboxyl transferase domain IYZ83_004585 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IYZ83_004585 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IYZ83_004585 PF06827 Zinc finger found in FPG and IleRS IYZ83_004590 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IYZ83_004590 PF01243 Pyridoxamine 5'-phosphate oxidase IYZ83_004605 PF00528 Binding-protein-dependent transport system inner membrane component IYZ83_004610 PF01245 Ribosomal protein L19 IYZ83_004615 PF01746 tRNA (Guanine-1)-methyltransferase IYZ83_004620 PF01259 SAICAR synthetase IYZ83_004625 PF02769 AIR synthase related protein, C-terminal domain IYZ83_004625 PF00586 AIR synthase related protein, N-terminal domain IYZ83_004635 PF10609 NUBPL iron-transfer P-loop NTPase IYZ83_004670 PF00579 tRNA synthetases class I (W and Y) IYZ83_004685 PF00293 NUDIX domain IYZ83_004690 PF01026 TatD related DNase IYZ83_004695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IYZ83_004695 PF00056 lactate/malate dehydrogenase, NAD binding domain IYZ83_004700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IYZ83_004705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IYZ83_004710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IYZ83_004715 PF01230 HIT domain IYZ83_004730 PF02875 Mur ligase family, glutamate ligase domain IYZ83_004730 PF08245 Mur ligase middle domain IYZ83_004730 PF01225 Mur ligase family, catalytic domain IYZ83_004735 PF08338 Domain of unknown function (DUF1731) IYZ83_004735 PF01370 NAD dependent epimerase/dehydratase family IYZ83_004745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IYZ83_004745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IYZ83_004750 PF02504 Fatty acid synthesis protein IYZ83_004755 PF01783 Ribosomal L32p protein family IYZ83_004760 PF02405 Permease MlaE IYZ83_004765 PF00005 ABC transporter IYZ83_004765 PF08402 TOBE domain IYZ83_004770 PF02881 SRP54-type protein, helical bundle domain IYZ83_004770 PF02978 Signal peptide binding domain IYZ83_004770 PF00448 SRP54-type protein, GTPase domain IYZ83_004780 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYZ83_004785 PF07977 FabA-like domain IYZ83_004795 PF01103 Surface antigen IYZ83_004795 PF07244 Surface antigen variable number repeat IYZ83_004800 PF17820 PDZ domain IYZ83_004800 PF02163 Peptidase family M50 IYZ83_004820 PF00216 Bacterial DNA-binding protein IYZ83_004825 PF00575 S1 RNA binding domain IYZ83_004855 PF01523 Putative modulator of DNA gyrase IYZ83_004900 PF07517 SecA DEAD-like domain IYZ83_004900 PF07516 SecA Wing and Scaffold domain IYZ83_004900 PF01043 SecA preprotein cross-linking domain IYZ83_004900 PF02810 SEC-C motif IYZ83_004900 PF00271 Helicase conserved C-terminal domain IYZ83_004935 PF02875 Mur ligase family, glutamate ligase domain IYZ83_004935 PF08245 Mur ligase middle domain IYZ83_004950 PF03364 Polyketide cyclase / dehydrase and lipid transport IYZ83_004955 PF13462 Thioredoxin IYZ83_004985 PF12169 DNA polymerase III subunits gamma and tau domain III IYZ83_004990 PF02575 YbaB/EbfC DNA-binding family IYZ83_005000 PF00483 Nucleotidyl transferase IYZ83_005000 PF01050 Mannose-6-phosphate isomerase IYZ83_005005 PF12704 MacB-like periplasmic core domain IYZ83_005005 PF02687 FtsX-like permease family IYZ83_005020 PF00231 ATP synthase IYZ83_005025 PF01523 Putative modulator of DNA gyrase IYZ83_005030 PF00313 'Cold-shock' DNA-binding domain IYZ83_005035 PF00270 DEAD/DEAH box helicase IYZ83_005035 PF00271 Helicase conserved C-terminal domain IYZ83_005040 PF01219 Prokaryotic diacylglycerol kinase IYZ83_005045 PF02142 MGS-like domain IYZ83_005045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IYZ83_005045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IYZ83_005055 PF03631 Virulence factor BrkB IYZ83_005075 PF00156 Phosphoribosyl transferase domain IYZ83_005075 PF13537 Glutamine amidotransferase domain IYZ83_005085 PF03232 Ubiquinone biosynthesis protein COQ7 IYZ83_005090 PF03167 Uracil DNA glycosylase superfamily IYZ83_005095 PF01327 Polypeptide deformylase IYZ83_005100 PF02491 SHS2 domain inserted in FTSA IYZ83_005105 PF00557 Metallopeptidase family M24 IYZ83_005110 PF00083 Sugar (and other) transporter IYZ83_005115 PF01795 MraW methylase family IYZ83_005125 PF01386 Ribosomal L25p family IYZ83_005125 PF14693 Ribosomal protein TL5, C-terminal domain IYZ83_005130 PF01195 Peptidyl-tRNA hydrolase IYZ83_005135 PF00154 recA bacterial DNA recombination protein IYZ83_005140 PF01416 tRNA pseudouridine synthase IYZ83_005145 PF02768 DNA polymerase III beta subunit, C-terminal domain IYZ83_005145 PF00712 DNA polymerase III beta subunit, N-terminal domain IYZ83_005145 PF02767 DNA polymerase III beta subunit, central domain IYZ83_005155 PF00140 Sigma-70 factor, region 1.2 IYZ83_005155 PF04545 Sigma-70, region 4 IYZ83_005155 PF04542 Sigma-70 region 2 IYZ83_005160 PF13505 Outer membrane protein beta-barrel domain IYZ83_005180 PF02881 SRP54-type protein, helical bundle domain IYZ83_005180 PF00448 SRP54-type protein, GTPase domain IYZ83_005185 PF01592 NifU-like N terminal domain IYZ83_005190 PF01521 Iron-sulphur cluster biosynthesis IYZ83_005195 PF00226 DnaJ domain IYZ83_005195 PF07743 HSCB C-terminal oligomerisation domain IYZ83_005200 PF00012 Hsp70 protein IYZ83_005205 PF10502 Signal peptidase, peptidase S26 IYZ83_005215 PF02780 Transketolase, C-terminal domain IYZ83_005215 PF00364 Biotin-requiring enzyme IYZ83_005215 PF02779 Transketolase, pyrimidine binding domain IYZ83_005230 PF01066 CDP-alcohol phosphatidyltransferase IYZ83_005235 PF02666 Phosphatidylserine decarboxylase IYZ83_005240 PF00391 PEP-utilising enzyme, mobile domain IYZ83_005240 PF02896 PEP-utilising enzyme, TIM barrel domain IYZ83_005240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IYZ83_005260 PF00925 GTP cyclohydrolase II IYZ83_005260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IYZ83_005265 PF01272 Transcription elongation factor, GreA/GreB, C-term IYZ83_005265 PF03449 Transcription elongation factor, N-terminal IYZ83_005270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYZ83_005270 PF00306 ATP synthase alpha/beta chain, C terminal domain IYZ83_005270 PF02874 ATP synthase alpha/beta family, beta-barrel domain IYZ83_005275 PF00213 ATP synthase delta (OSCP) subunit IYZ83_005280 PF02021 Uncharacterised protein family UPF0102 IYZ83_005285 PF01196 Ribosomal protein L17 IYZ83_005290 PF01000 RNA polymerase Rpb3/RpoA insert domain IYZ83_005290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IYZ83_005290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IYZ83_005295 PF00411 Ribosomal protein S11 IYZ83_005300 PF00416 Ribosomal protein S13/S18 IYZ83_005310 PF00344 SecY translocase IYZ83_005315 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IYZ83_005320 PF00333 Ribosomal protein S5, N-terminal domain IYZ83_005320 PF03719 Ribosomal protein S5, C-terminal domain IYZ83_005325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IYZ83_005330 PF00347 Ribosomal protein L6 IYZ83_005335 PF00410 Ribosomal protein S8 IYZ83_005340 PF00253 Ribosomal protein S14p/S29e IYZ83_005345 PF00281 Ribosomal protein L5 IYZ83_005345 PF00673 ribosomal L5P family C-terminus IYZ83_005350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IYZ83_005355 PF00238 Ribosomal protein L14p/L23e IYZ83_005360 PF00366 Ribosomal protein S17 IYZ83_005365 PF00831 Ribosomal L29 protein IYZ83_005370 PF00252 Ribosomal protein L16p/L10e IYZ83_005375 PF07650 KH domain IYZ83_005375 PF00189 Ribosomal protein S3, C-terminal domain IYZ83_005380 PF00237 Ribosomal protein L22p/L17e IYZ83_005385 PF00203 Ribosomal protein S19 IYZ83_005390 PF00181 Ribosomal Proteins L2, RNA binding domain IYZ83_005390 PF03947 Ribosomal Proteins L2, C-terminal domain IYZ83_005395 PF00276 Ribosomal protein L23 IYZ83_005400 PF00573 Ribosomal protein L4/L1 family IYZ83_005405 PF00297 Ribosomal protein L3 IYZ83_005410 PF00338 Ribosomal protein S10p/S20e IYZ83_005440 PF00210 Ferritin-like domain IYZ83_005445 PF02104 SURF1 family IYZ83_005450 PF08245 Mur ligase middle domain IYZ83_005450 PF01225 Mur ligase family, catalytic domain IYZ83_005450 PF02875 Mur ligase family, glutamate ligase domain IYZ83_005460 PF00113 Enolase, C-terminal TIM barrel domain IYZ83_005460 PF03952 Enolase, N-terminal domain IYZ83_005465 PF01018 GTP1/OBG IYZ83_005465 PF01926 50S ribosome-binding GTPase IYZ83_005490 PF02325 YGGT family IYZ83_005495 PF17854 FtsK alpha domain IYZ83_005495 PF09397 Ftsk gamma domain IYZ83_005495 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IYZ83_005495 PF01580 FtsK/SpoIIIE family IYZ83_005515 PF04551 GcpE protein IYZ83_005520 PF01556 DnaJ C terminal domain IYZ83_005520 PF00226 DnaJ domain IYZ83_005520 PF00684 DnaJ central domain IYZ83_005530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IYZ83_005530 PF01409 tRNA synthetases class II core domain (F) IYZ83_005535 PF14602 Hexapeptide repeat of succinyl-transferase IYZ83_005535 PF12804 MobA-like NTP transferase domain IYZ83_005535 PF00132 Bacterial transferase hexapeptide (six repeats) IYZ83_005565 PF00829 Ribosomal prokaryotic L21 protein IYZ83_005570 PF01016 Ribosomal L27 protein IYZ83_005585 PF02773 S-adenosylmethionine synthetase, C-terminal domain IYZ83_005585 PF02772 S-adenosylmethionine synthetase, central domain IYZ83_005585 PF00438 S-adenosylmethionine synthetase, N-terminal domain IYZ83_005590 PF03070 TENA/THI-4/PQQC family IYZ83_005600 PF00510 Cytochrome c oxidase subunit III IYZ83_005605 PF02075 Crossover junction endodeoxyribonuclease RuvC IYZ83_005620 PF00825 Ribonuclease P IYZ83_005625 PF00468 Ribosomal protein L34 IYZ83_005630 PF00528 Binding-protein-dependent transport system inner membrane component IYZ83_005635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYZ83_005635 PF02874 ATP synthase alpha/beta family, beta-barrel domain IYZ83_005640 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IYZ83_005650 PF01209 ubiE/COQ5 methyltransferase family IYZ83_005655 PF00664 ABC transporter transmembrane region IYZ83_005655 PF00005 ABC transporter IYZ83_005670 PF00750 tRNA synthetases class I (R) IYZ83_005670 PF03485 Arginyl tRNA synthetase N terminal domain IYZ83_005670 PF05746 DALR anticodon binding domain IYZ83_005675 PF00005 ABC transporter IYZ83_005695 PF02386 Cation transport protein IYZ83_005705 PF00692 dUTPase IYZ83_005715 PF03462 PCRF domain IYZ83_005715 PF00472 RF-1 domain IYZ83_005720 PF01926 50S ribosome-binding GTPase IYZ83_005725 PF00696 Amino acid kinase family IYZ83_005735 PF01258 Prokaryotic dksA/traR C4-type zinc finger IYZ83_005745 PF00596 Class II Aldolase and Adducin N-terminal domain IYZ83_005755 PF00814 Glycoprotease family IYZ83_005765 PF08241 Methyltransferase domain IYZ83_005770 PF13662 Toprim domain IYZ83_005770 PF08275 DNA primase catalytic core, N-terminal domain IYZ83_005770 PF01807 CHC2 zinc finger IYZ83_005780 PF00111 2Fe-2S iron-sulfur cluster binding domain IYZ83_005790 PF03918 Cytochrome C biogenesis protein IYZ83_005795 PF13361 UvrD-like helicase C-terminal domain IYZ83_005795 PF00580 UvrD/REP helicase N-terminal domain IYZ83_005795 PF12705 PD-(D/E)XK nuclease superfamily IYZ83_005800 PF08544 GHMP kinases C terminal IYZ83_005800 PF00288 GHMP kinases N terminal domain IYZ83_005810 PF00950 ABC 3 transport family IYZ83_005825 PF04384 Iron-sulphur cluster assembly IYZ83_005835 PF00163 Ribosomal protein S4/S9 N-terminal domain IYZ83_005835 PF01479 S4 domain IYZ83_005840 PF00456 Transketolase, thiamine diphosphate binding domain IYZ83_005840 PF02780 Transketolase, C-terminal domain IYZ83_005840 PF02779 Transketolase, pyrimidine binding domain IYZ83_005845 PF00679 Elongation factor G C-terminus IYZ83_005845 PF00009 Elongation factor Tu GTP binding domain IYZ83_005845 PF03144 Elongation factor Tu domain 2 IYZ83_005850 PF00749 tRNA synthetases class I (E and Q), catalytic domain IYZ83_005875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IYZ83_005875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IYZ83_005880 PF00902 Sec-independent protein translocase protein (TatC) IYZ83_005895 PF12826 Helix-hairpin-helix motif IYZ83_005895 PF03120 NAD-dependent DNA ligase OB-fold domain IYZ83_005895 PF00533 BRCA1 C Terminus (BRCT) domain IYZ83_005895 PF01653 NAD-dependent DNA ligase adenylation domain IYZ83_005915 PF07478 D-ala D-ala ligase C-terminus IYZ83_005915 PF01820 D-ala D-ala ligase N-terminus IYZ83_005925 PF02810 SEC-C motif IYZ83_005925 PF07517 SecA DEAD-like domain IYZ83_005925 PF01043 SecA preprotein cross-linking domain IYZ83_005925 PF07516 SecA Wing and Scaffold domain IYZ83_005960 PF01979 Amidohydrolase family IYZ83_005965 PF00570 HRDC domain IYZ83_005965 PF01612 3'-5' exonuclease IYZ83_005970 PF01121 Dephospho-CoA kinase IYZ83_005985 PF08264 Anticodon-binding domain of tRNA IYZ83_005985 PF09334 tRNA synthetases class I (M) IYZ83_005990 PF01040 UbiA prenyltransferase family IYZ83_005995 PF02033 Ribosome-binding factor A IYZ83_006000 PF11987 Translation-initiation factor 2 IYZ83_006000 PF04760 Translation initiation factor IF-2, N-terminal region IYZ83_006000 PF00009 Elongation factor Tu GTP binding domain IYZ83_006005 PF08529 NusA N-terminal domain IYZ83_006005 PF00575 S1 RNA binding domain IYZ83_006005 PF13184 NusA-like KH domain IYZ83_006010 PF00873 AcrB/AcrD/AcrF family