locus-tag class description E0495_00005 PF11638 DnaA N-terminal domain E0495_00005 PF00308 Bacterial dnaA protein E0495_00005 PF08299 Bacterial dnaA protein helix-turn-helix E0495_00020 PF00925 GTP cyclohydrolase II E0495_00025 PF04335 VirB8 protein E0495_00040 PF00437 Type II/IV secretion system protein E0495_00045 PF02534 Type IV secretory system Conjugative DNA transfer E0495_00055 PF17827 PrmC N-terminal domain E0495_00055 PF13847 Methyltransferase domain E0495_00060 PF00164 Ribosomal protein S12/S23 E0495_00065 PF00177 Ribosomal protein S7p/S5e E0495_00070 PF03144 Elongation factor Tu domain 2 E0495_00070 PF00009 Elongation factor Tu GTP binding domain E0495_00070 PF14492 Elongation Factor G, domain II E0495_00070 PF00679 Elongation factor G C-terminus E0495_00070 PF03764 Elongation factor G, domain IV E0495_00075 PF03144 Elongation factor Tu domain 2 E0495_00075 PF03143 Elongation factor Tu C-terminal domain E0495_00075 PF00009 Elongation factor Tu GTP binding domain E0495_00090 PF02357 Transcription termination factor nusG E0495_00090 PF00467 KOW motif E0495_00095 PF00298 Ribosomal protein L11, RNA binding domain E0495_00095 PF03946 Ribosomal protein L11, N-terminal domain E0495_00100 PF00687 Ribosomal protein L1p/L10e family E0495_00105 PF00466 Ribosomal protein L10 E0495_00115 PF05000 RNA polymerase Rpb1, domain 4 E0495_00115 PF04998 RNA polymerase Rpb1, domain 5 E0495_00115 PF04563 RNA polymerase beta subunit E0495_00115 PF04561 RNA polymerase Rpb2, domain 2 E0495_00115 PF04565 RNA polymerase Rpb2, domain 3 E0495_00115 PF10385 RNA polymerase beta subunit external 1 domain E0495_00115 PF00562 RNA polymerase Rpb2, domain 6 E0495_00115 PF04560 RNA polymerase Rpb2, domain 7 E0495_00115 PF04983 RNA polymerase Rpb1, domain 3 E0495_00115 PF04997 RNA polymerase Rpb1, domain 1 E0495_00115 PF00623 RNA polymerase Rpb1, domain 2 E0495_00120 PF01207 Dihydrouridine synthase (Dus) E0495_00130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E0495_00130 PF02403 Seryl-tRNA synthetase N-terminal domain E0495_00135 PF02843 Phosphoribosylglycinamide synthetase, C domain E0495_00135 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E0495_00135 PF02844 Phosphoribosylglycinamide synthetase, N domain E0495_00160 PF04551 GcpE protein E0495_00175 PF01580 FtsK/SpoIIIE family E0495_00175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E0495_00175 PF09397 Ftsk gamma domain E0495_00175 PF17854 FtsK alpha domain E0495_00180 PF02325 YGGT family E0495_00230 PF00677 Lumazine binding domain E0495_00240 PF01409 tRNA synthetases class II core domain (F) E0495_00240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E0495_00245 PF00132 Bacterial transferase hexapeptide (six repeats) E0495_00245 PF14602 Hexapeptide repeat of succinyl-transferase E0495_00245 PF12804 MobA-like NTP transferase domain E0495_00255 PF00829 Ribosomal prokaryotic L21 protein E0495_00260 PF01016 Ribosomal L27 protein E0495_00270 PF00438 S-adenosylmethionine synthetase, N-terminal domain E0495_00270 PF02772 S-adenosylmethionine synthetase, central domain E0495_00270 PF02773 S-adenosylmethionine synthetase, C-terminal domain E0495_00290 PF14850 DNA-binding domain of Proline dehydrogenase E0495_00290 PF01619 Proline dehydrogenase E0495_00290 PF00171 Aldehyde dehydrogenase family E0495_00290 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E0495_00295 PF00330 Aconitase family (aconitate hydratase) E0495_00295 PF00694 Aconitase C-terminal domain E0495_00300 PF02556 Preprotein translocase subunit SecB E0495_00310 PF00929 Exonuclease E0495_00315 PF02630 SCO1/SenC E0495_00320 PF00204 DNA gyrase B E0495_00320 PF00986 DNA gyrase B subunit, carboxyl terminus E0495_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E0495_00320 PF01751 Toprim domain E0495_00350 PF00132 Bacterial transferase hexapeptide (six repeats) E0495_00350 PF14602 Hexapeptide repeat of succinyl-transferase E0495_00350 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E0495_00355 PF13717 zinc-ribbon domain E0495_00360 PF00834 Ribulose-phosphate 3 epimerase family E0495_00370 PF01872 RibD C-terminal domain E0495_00370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E0495_00375 PF13286 Phosphohydrolase-associated domain E0495_00375 PF01966 HD domain E0495_00380 PF01521 Iron-sulphur cluster biosynthesis E0495_00385 PF00005 ABC transporter E0495_00395 PF02129 X-Pro dipeptidyl-peptidase (S15 family) E0495_00400 PF00266 Aminotransferase class-V E0495_00415 PF00814 Glycoprotease family E0495_00420 PF01548 Transposase E0495_00420 PF02371 Transposase IS116/IS110/IS902 family E0495_00440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E0495_00440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E0495_00440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E0495_00440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E0495_00450 PF02896 PEP-utilising enzyme, TIM barrel domain E0495_00450 PF00391 PEP-utilising enzyme, mobile domain E0495_00450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E0495_00460 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E0495_00475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E0495_00475 PF00117 Glutamine amidotransferase class-I E0495_00490 PF03144 Elongation factor Tu domain 2 E0495_00490 PF00009 Elongation factor Tu GTP binding domain E0495_00490 PF03143 Elongation factor Tu C-terminal domain E0495_00495 PF00338 Ribosomal protein S10p/S20e E0495_00500 PF00297 Ribosomal protein L3 E0495_00505 PF00573 Ribosomal protein L4/L1 family E0495_00510 PF00276 Ribosomal protein L23 E0495_00515 PF00181 Ribosomal Proteins L2, RNA binding domain E0495_00515 PF03947 Ribosomal Proteins L2, C-terminal domain E0495_00520 PF00203 Ribosomal protein S19 E0495_00525 PF00237 Ribosomal protein L22p/L17e E0495_00530 PF07650 KH domain E0495_00530 PF00189 Ribosomal protein S3, C-terminal domain E0495_00535 PF00252 Ribosomal protein L16p/L10e E0495_00540 PF00831 Ribosomal L29 protein E0495_00545 PF00366 Ribosomal protein S17 E0495_00550 PF00238 Ribosomal protein L14p/L23e E0495_00555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E0495_00560 PF00673 ribosomal L5P family C-terminus E0495_00560 PF00281 Ribosomal protein L5 E0495_00565 PF00253 Ribosomal protein S14p/S29e E0495_00570 PF00410 Ribosomal protein S8 E0495_00575 PF00347 Ribosomal protein L6 E0495_00580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E0495_00585 PF00333 Ribosomal protein S5, N-terminal domain E0495_00585 PF03719 Ribosomal protein S5, C-terminal domain E0495_00590 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E0495_00595 PF00344 SecY translocase E0495_00605 PF00416 Ribosomal protein S13/S18 E0495_00610 PF00411 Ribosomal protein S11 E0495_00615 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E0495_00615 PF01000 RNA polymerase Rpb3/RpoA insert domain E0495_00615 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E0495_00620 PF01196 Ribosomal protein L17 E0495_00625 PF02021 Uncharacterised protein family UPF0102 E0495_00630 PF00213 ATP synthase delta (OSCP) subunit E0495_00635 PF00306 ATP synthase alpha/beta chain, C terminal domain E0495_00635 PF02874 ATP synthase alpha/beta family, beta-barrel domain E0495_00635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E0495_00640 PF03449 Transcription elongation factor, N-terminal E0495_00640 PF01272 Transcription elongation factor, GreA/GreB, C-term E0495_00645 PF00925 GTP cyclohydrolase II E0495_00645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E0495_00665 PF00529 HlyD membrane-fusion protein of T1SS E0495_00665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E0495_00690 PF13662 Toprim domain E0495_00690 PF01807 CHC2 zinc finger E0495_00690 PF08275 DNA primase catalytic core, N-terminal domain E0495_00700 PF08241 Methyltransferase domain E0495_00710 PF08264 Anticodon-binding domain of tRNA E0495_00710 PF09334 tRNA synthetases class I (M) E0495_00720 PF03796 DnaB-like helicase C terminal domain E0495_00720 PF00772 DnaB-like helicase N terminal domain E0495_00730 PF06271 RDD family E0495_00740 PF04002 RadC-like JAB domain E0495_00750 PF12705 PD-(D/E)XK nuclease superfamily E0495_00750 PF00580 UvrD/REP helicase N-terminal domain E0495_00750 PF13361 UvrD-like helicase C-terminal domain E0495_00755 PF08544 GHMP kinases C terminal E0495_00755 PF00288 GHMP kinases N terminal domain E0495_00765 PF00950 ABC 3 transport family E0495_00790 PF00709 Adenylosuccinate synthetase E0495_00805 PF01176 Translation initiation factor 1A / IF-1 E0495_00810 PF02545 Maf-like protein E0495_00820 PF01235 Sodium:alanine symporter family E0495_00860 PF00005 ABC transporter E0495_00870 PF01336 OB-fold nucleic acid binding domain E0495_00870 PF00152 tRNA synthetases class II (D, K and N) E0495_00870 PF02938 GAD domain E0495_00875 PF00083 Sugar (and other) transporter E0495_00875 PF08946 Osmosensory transporter coiled coil E0495_00880 PF00849 RNA pseudouridylate synthase E0495_00880 PF01479 S4 domain E0495_00885 PF00676 Dehydrogenase E1 component E0495_00900 PF00919 Uncharacterized protein family UPF0004 E0495_00900 PF01938 TRAM domain E0495_00900 PF04055 Radical SAM superfamily E0495_00905 PF00854 POT family E0495_00910 PF08264 Anticodon-binding domain of tRNA E0495_00910 PF00133 tRNA synthetases class I (I, L, M and V) E0495_00920 PF03484 tRNA synthetase B5 domain E0495_00920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E0495_00920 PF01588 Putative tRNA binding domain E0495_00920 PF03483 B3/4 domain E0495_00920 PF03147 Ferredoxin-fold anticodon binding domain E0495_00930 PF00119 ATP synthase A chain E0495_00935 PF00137 ATP synthase subunit C E0495_00955 PF02628 Cytochrome oxidase assembly protein E0495_00960 PF00289 Biotin carboxylase, N-terminal domain E0495_00960 PF02785 Biotin carboxylase C-terminal domain E0495_00960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E0495_00970 PF00749 tRNA synthetases class I (E and Q), catalytic domain E0495_00980 PF00890 FAD binding domain E0495_00980 PF02910 Fumarate reductase flavoprotein C-term E0495_00990 PF00625 Guanylate kinase E0495_01005 PF01926 50S ribosome-binding GTPase E0495_01005 PF06071 Protein of unknown function (DUF933) E0495_01015 PF01743 Poly A polymerase head domain E0495_01015 PF12627 Probable RNA and SrmB- binding site of polymerase A E0495_01015 PF13735 tRNA nucleotidyltransferase domain 2 putative E0495_01035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E0495_01035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E0495_01040 PF00902 Sec-independent protein translocase protein (TatC) E0495_01045 PF01316 Arginine repressor, DNA binding domain E0495_01045 PF02863 Arginine repressor, C-terminal domain E0495_01050 PF00497 Bacterial extracellular solute-binding proteins, family 3 E0495_01055 PF00528 Binding-protein-dependent transport system inner membrane component E0495_01060 PF00005 ABC transporter E0495_01080 PF00444 Ribosomal protein L36 E0495_01085 PF03618 Kinase/pyrophosphorylase E0495_01090 PF01578 Cytochrome C assembly protein E0495_01125 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_01130 PF09312 SurA N-terminal domain E0495_01130 PF00639 PPIC-type PPIASE domain E0495_01140 PF00719 Inorganic pyrophosphatase E0495_01155 PF00872 Transposase, Mutator family E0495_01160 PF00892 EamA-like transporter family E0495_01165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E0495_01165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E0495_01165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E0495_01175 PF01212 Beta-eliminating lyase E0495_01180 PF01212 Beta-eliminating lyase E0495_01185 PF00005 ABC transporter E0495_01185 PF00664 ABC transporter transmembrane region E0495_01225 PF01043 SecA preprotein cross-linking domain E0495_01225 PF07516 SecA Wing and Scaffold domain E0495_01225 PF02810 SEC-C motif E0495_01225 PF07517 SecA DEAD-like domain E0495_01235 PF00923 Transaldolase/Fructose-6-phosphate aldolase E0495_01260 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E0495_01260 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E0495_01265 PF02441 Flavoprotein E0495_01270 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) E0495_01275 PF00571 CBS domain E0495_01275 PF01595 Cyclin M transmembrane N-terminal domain E0495_01275 PF03471 Transporter associated domain E0495_01280 PF00202 Aminotransferase class-III E0495_01285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E0495_01325 PF01926 50S ribosome-binding GTPase E0495_01325 PF01018 GTP1/OBG E0495_01330 PF00113 Enolase, C-terminal TIM barrel domain E0495_01330 PF03952 Enolase, N-terminal domain E0495_01335 PF01225 Mur ligase family, catalytic domain E0495_01335 PF02875 Mur ligase family, glutamate ligase domain E0495_01335 PF08245 Mur ligase middle domain E0495_01340 PF03330 Lytic transglycolase E0495_01365 PF04055 Radical SAM superfamily E0495_01365 PF00919 Uncharacterized protein family UPF0004 E0495_01370 PF01425 Amidase E0495_01410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E0495_01435 PF01434 Peptidase family M41 E0495_01435 PF17862 AAA+ lid domain E0495_01435 PF00004 ATPase family associated with various cellular activities (AAA) E0495_01435 PF06480 FtsH Extracellular E0495_01440 PF08264 Anticodon-binding domain of tRNA E0495_01440 PF00133 tRNA synthetases class I (I, L, M and V) E0495_01465 PF00117 Glutamine amidotransferase class-I E0495_01465 PF06418 CTP synthase N-terminus E0495_01470 PF14437 MafB19-like deaminase E0495_01480 PF07690 Major Facilitator Superfamily E0495_01480 PF00083 Sugar (and other) transporter E0495_01490 PF17862 AAA+ lid domain E0495_01490 PF01434 Peptidase family M41 E0495_01490 PF00004 ATPase family associated with various cellular activities (AAA) E0495_01495 PF00364 Biotin-requiring enzyme E0495_01495 PF02779 Transketolase, pyrimidine binding domain E0495_01495 PF02780 Transketolase, C-terminal domain E0495_01510 PF06421 GTP-binding protein LepA C-terminus E0495_01510 PF00679 Elongation factor G C-terminus E0495_01510 PF14492 Elongation Factor G, domain II E0495_01510 PF00009 Elongation factor Tu GTP binding domain E0495_01510 PF03144 Elongation factor Tu domain 2 E0495_01530 PF08525 Opacity-associated protein A N-terminal motif E0495_01530 PF01476 LysM domain E0495_01530 PF01551 Peptidase family M23 E0495_01535 PF01709 Transcriptional regulator E0495_01540 PF13525 Outer membrane lipoprotein E0495_01550 PF01066 CDP-alcohol phosphatidyltransferase E0495_01555 PF00390 Malic enzyme, N-terminal domain E0495_01555 PF01515 Phosphate acetyl/butaryl transferase E0495_01555 PF03949 Malic enzyme, NAD binding domain E0495_01570 PF00462 Glutaredoxin E0495_01575 PF00206 Lyase E0495_01575 PF10415 Fumarase C C-terminus E0495_01595 PF03485 Arginyl tRNA synthetase N terminal domain E0495_01595 PF00750 tRNA synthetases class I (R) E0495_01595 PF05746 DALR anticodon binding domain E0495_01605 PF00664 ABC transporter transmembrane region E0495_01605 PF00005 ABC transporter E0495_01620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_01620 PF01348 Type II intron maturase E0495_01630 PF01098 Cell cycle protein E0495_01635 PF01209 ubiE/COQ5 methyltransferase family E0495_01640 PF04055 Radical SAM superfamily E0495_01640 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E0495_01645 PF00830 Ribosomal L28 family E0495_01655 PF04384 Iron-sulphur cluster assembly E0495_01665 PF00163 Ribosomal protein S4/S9 N-terminal domain E0495_01665 PF01479 S4 domain E0495_01670 PF02780 Transketolase, C-terminal domain E0495_01670 PF00456 Transketolase, thiamine diphosphate binding domain E0495_01670 PF02779 Transketolase, pyrimidine binding domain E0495_01695 PF01380 SIS domain E0495_01700 PF02699 Preprotein translocase subunit E0495_01710 PF00318 Ribosomal protein S2 E0495_01715 PF00889 Elongation factor TS E0495_01720 PF00696 Amino acid kinase family E0495_01725 PF01765 Ribosome recycling factor E0495_01735 PF01255 Putative undecaprenyl diphosphate synthase E0495_01750 PF01467 Cytidylyltransferase-like E0495_01770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E0495_01770 PF01565 FAD binding domain E0495_01775 PF03900 Porphobilinogen deaminase, C-terminal domain E0495_01775 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E0495_01780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E0495_01780 PF00364 Biotin-requiring enzyme E0495_01780 PF02817 e3 binding domain E0495_01885 PF01348 Type II intron maturase E0495_01885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_01905 PF01555 DNA methylase E0495_01905 PF18755 Restriction Enzyme Adenine Methylase Associated E0495_01975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_02065 PF04984 Phage tail sheath protein subtilisin-like domain E0495_02065 PF17482 Phage tail sheath C-terminal domain E0495_02250 PF04002 RadC-like JAB domain E0495_02300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_02365 PF01578 Cytochrome C assembly protein E0495_02365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E0495_02375 PF01979 Amidohydrolase family E0495_02385 PF00375 Sodium:dicarboxylate symporter family E0495_02390 PF00156 Phosphoribosyl transferase domain E0495_02435 PF14572 Phosphoribosyl synthetase-associated domain E0495_02435 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E0495_02440 PF02686 Glu-tRNAGln amidotransferase C subunit E0495_02445 PF07676 WD40-like Beta Propeller Repeat E0495_02445 PF04052 TolB amino-terminal domain E0495_02450 PF17770 Ribonuclease J C-terminal domain E0495_02450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E0495_02450 PF12706 Beta-lactamase superfamily domain E0495_02455 PF00684 DnaJ central domain E0495_02455 PF01556 DnaJ C terminal domain E0495_02455 PF00226 DnaJ domain E0495_02495 PF03070 TENA/THI-4/PQQC family E0495_02505 PF00510 Cytochrome c oxidase subunit III E0495_02510 PF02075 Crossover junction endodeoxyribonuclease RuvC E0495_02515 PF03652 Holliday junction resolvase E0495_02520 PF02637 GatB domain E0495_02520 PF02934 GatB/GatE catalytic domain E0495_02545 PF09190 DALR domain E0495_02545 PF01406 tRNA synthetases class I (C) catalytic domain E0495_02550 PF06055 Exopolysaccharide synthesis, ExoD E0495_02555 PF02416 mttA/Hcf106 family E0495_02560 PF00005 ABC transporter E0495_02560 PF08402 TOBE domain E0495_02570 PF01541 GIY-YIG catalytic domain E0495_02570 PF08459 UvrC Helix-hairpin-helix N-terminal E0495_02570 PF02151 UvrB/uvrC motif E0495_02575 PF02092 Glycyl-tRNA synthetase beta subunit E0495_02575 PF05746 DALR anticodon binding domain E0495_02580 PF02091 Glycyl-tRNA synthetase alpha subunit E0495_02590 PF00490 Delta-aminolevulinic acid dehydratase E0495_02595 PF00146 NADH dehydrogenase E0495_02600 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal E0495_02600 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E0495_02600 PF00384 Molybdopterin oxidoreductase E0495_02620 PF03167 Uracil DNA glycosylase superfamily E0495_02625 PF01327 Polypeptide deformylase E0495_02630 PF02491 SHS2 domain inserted in FTSA E0495_02635 PF00557 Metallopeptidase family M24 E0495_02640 PF07690 Major Facilitator Superfamily E0495_02640 PF00083 Sugar (and other) transporter E0495_02645 PF01795 MraW methylase family E0495_02660 PF14693 Ribosomal protein TL5, C-terminal domain E0495_02660 PF01386 Ribosomal L25p family E0495_02665 PF01195 Peptidyl-tRNA hydrolase E0495_02680 PF01494 FAD binding domain E0495_02705 PF10609 NUBPL iron-transfer P-loop NTPase E0495_02725 PF13333 Integrase core domain E0495_02725 PF00665 Integrase core domain E0495_02725 PF13276 HTH-like domain E0495_02765 PF01728 FtsJ-like methyltransferase E0495_02770 PF10691 Protein of unknown function (DUF2497) E0495_02780 PF00572 Ribosomal protein L13 E0495_02785 PF00380 Ribosomal protein S9/S16 E0495_02795 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E0495_02810 PF13333 Integrase core domain E0495_02810 PF00665 Integrase core domain E0495_02810 PF13276 HTH-like domain E0495_02820 PF00133 tRNA synthetases class I (I, L, M and V) E0495_02820 PF08264 Anticodon-binding domain of tRNA E0495_02820 PF09334 tRNA synthetases class I (M) E0495_02820 PF13603 Leucyl-tRNA synthetase, Domain 2 E0495_02825 PF01551 Peptidase family M23 E0495_02835 PF00216 Bacterial DNA-binding protein E0495_02855 PF02789 Cytosol aminopeptidase family, N-terminal domain E0495_02855 PF00883 Cytosol aminopeptidase family, catalytic domain E0495_02900 PF01548 Transposase E0495_02900 PF02371 Transposase IS116/IS110/IS902 family E0495_02905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E0495_02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_02915 PF03033 Glycosyltransferase family 28 N-terminal domain E0495_02915 PF04101 Glycosyltransferase family 28 C-terminal domain E0495_02920 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E0495_02920 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E0495_02925 PF04972 BON domain E0495_02935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E0495_02935 PF05698 Bacterial trigger factor protein (TF) C-terminus E0495_02935 PF05697 Bacterial trigger factor protein (TF) E0495_02940 PF00574 Clp protease E0495_02945 PF06689 ClpX C4-type zinc finger E0495_02945 PF10431 C-terminal, D2-small domain, of ClpB protein E0495_02945 PF07724 AAA domain (Cdc48 subfamily) E0495_02950 PF00004 ATPase family associated with various cellular activities (AAA) E0495_02950 PF05362 Lon protease (S16) C-terminal proteolytic domain E0495_02950 PF02190 ATP-dependent protease La (LON) substrate-binding domain E0495_02960 PF00115 Cytochrome C and Quinol oxidase polypeptide I E0495_02980 PF17768 RecJ OB domain E0495_02980 PF02272 DHHA1 domain E0495_02980 PF01368 DHH family E0495_02985 PF01571 Aminomethyltransferase folate-binding domain E0495_02990 PF00166 Chaperonin 10 Kd subunit E0495_02995 PF00118 TCP-1/cpn60 chaperonin family E0495_03020 PF00075 RNase H E0495_03025 PF01040 UbiA prenyltransferase family E0495_03030 PF00115 Cytochrome C and Quinol oxidase polypeptide I E0495_03035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E0495_03035 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E0495_03055 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_03070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_03070 PF01348 Type II intron maturase E0495_03105 PF07690 Major Facilitator Superfamily E0495_03145 PF00692 dUTPase E0495_03180 PF01113 Dihydrodipicolinate reductase, N-terminus E0495_03180 PF05173 Dihydrodipicolinate reductase, C-terminus E0495_03185 PF00005 ABC transporter E0495_03200 PF13276 HTH-like domain E0495_03200 PF00665 Integrase core domain E0495_03200 PF13333 Integrase core domain E0495_03210 PF01769 Divalent cation transporter E0495_03210 PF03448 MgtE intracellular N domain E0495_03210 PF00571 CBS domain E0495_03330 PF18073 Rubredoxin metal binding domain E0495_03335 PF02881 SRP54-type protein, helical bundle domain E0495_03335 PF00448 SRP54-type protein, GTPase domain E0495_03340 PF01592 NifU-like N terminal domain E0495_03345 PF01521 Iron-sulphur cluster biosynthesis E0495_03350 PF07743 HSCB C-terminal oligomerisation domain E0495_03355 PF00012 Hsp70 protein E0495_03360 PF10502 Signal peptidase, peptidase S26 E0495_03365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E0495_03365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E0495_03390 PF17676 LD-carboxypeptidase C-terminal domain E0495_03390 PF02016 LD-carboxypeptidase N-terminal domain E0495_03395 PF03099 Biotin/lipoate A/B protein ligase family E0495_03410 PF04860 Phage portal protein E0495_03420 PF03023 Lipid II flippase MurJ E0495_03435 PF01134 Glucose inhibited division protein A E0495_03435 PF13932 GidA associated domain E0495_03440 PF01321 Creatinase/Prolidase N-terminal domain E0495_03440 PF00557 Metallopeptidase family M24 E0495_03490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E0495_03490 PF00476 DNA polymerase family A E0495_03490 PF01367 5'-3' exonuclease, C-terminal SAM fold E0495_03530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E0495_03535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E0495_03535 PF02874 ATP synthase alpha/beta family, beta-barrel domain E0495_03540 PF00528 Binding-protein-dependent transport system inner membrane component E0495_03545 PF00468 Ribosomal protein L34 E0495_03570 PF01209 ubiE/COQ5 methyltransferase family E0495_03575 PF03477 ATP cone domain E0495_03575 PF00317 Ribonucleotide reductase, all-alpha domain E0495_03575 PF02867 Ribonucleotide reductase, barrel domain E0495_03580 PF00117 Glutamine amidotransferase class-I E0495_03580 PF00958 GMP synthase C terminal domain E0495_03580 PF02540 NAD synthase E0495_03585 PF03741 Integral membrane protein TerC family E0495_03585 PF03471 Transporter associated domain E0495_03585 PF00571 CBS domain E0495_03615 PF05192 MutS domain III E0495_03615 PF01624 MutS domain I E0495_03615 PF05190 MutS family domain IV E0495_03615 PF00488 MutS domain V E0495_03615 PF05188 MutS domain II E0495_03630 PF00570 HRDC domain E0495_03630 PF01612 3'-5' exonuclease E0495_03635 PF01121 Dephospho-CoA kinase E0495_03645 PF13276 HTH-like domain E0495_03645 PF13333 Integrase core domain E0495_03645 PF00665 Integrase core domain E0495_03675 PF02355 Protein export membrane protein E0495_03680 PF13276 HTH-like domain E0495_03680 PF00665 Integrase core domain E0495_03680 PF13333 Integrase core domain E0495_03695 PF00571 CBS domain E0495_03695 PF00478 IMP dehydrogenase / GMP reductase domain E0495_03700 PF00398 Ribosomal RNA adenine dimethylase E0495_03710 PF00121 Triosephosphate isomerase E0495_03715 PF17782 DprA winged helix domain E0495_03715 PF02481 DNA recombination-mediator protein A E0495_03720 PF00037 4Fe-4S binding domain E0495_03720 PF11953 Domain of unknown function (DUF3470) E0495_03730 PF01820 D-ala D-ala ligase N-terminus E0495_03730 PF07478 D-ala D-ala ligase C-terminus E0495_03735 PF03799 Cell division protein FtsQ E0495_03735 PF08478 POTRA domain, FtsQ-type E0495_03740 PF07943 Penicillin-binding protein 5, C-terminal domain E0495_03740 PF00768 D-alanyl-D-alanine carboxypeptidase E0495_03745 PF00893 Small Multidrug Resistance protein E0495_03750 PF00893 Small Multidrug Resistance protein E0495_03775 PF00905 Penicillin binding protein transpeptidase domain E0495_03775 PF03717 Penicillin-binding Protein dimerisation domain E0495_03780 PF03422 Carbohydrate binding module (family 6) E0495_03780 PF00457 Glycosyl hydrolases family 11 E0495_03780 PF01522 Polysaccharide deacetylase E0495_03785 PF13335 Magnesium chelatase, subunit ChlI C-terminal E0495_03785 PF01078 Magnesium chelatase, subunit ChlI E0495_03795 PF00091 Tubulin/FtsZ family, GTPase domain E0495_03795 PF12327 FtsZ family, C-terminal domain E0495_03810 PF02130 Uncharacterized protein family UPF0054 E0495_03815 PF13085 2Fe-2S iron-sulfur cluster binding domain E0495_03830 PF04608 Phosphatidylglycerophosphatase A E0495_03835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E0495_03835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E0495_03840 PF00486 Transcriptional regulatory protein, C terminal E0495_03840 PF00072 Response regulator receiver domain E0495_03875 PF01702 Queuine tRNA-ribosyltransferase E0495_03885 PF00675 Insulinase (Peptidase family M16) E0495_03885 PF05193 Peptidase M16 inactive domain E0495_03890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E0495_03890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E0495_03895 PF01654 Cytochrome bd terminal oxidase subunit I E0495_03900 PF02322 Cytochrome bd terminal oxidase subunit II E0495_03905 PF07650 KH domain E0495_03905 PF01926 50S ribosome-binding GTPase E0495_03925 PF07724 AAA domain (Cdc48 subfamily) E0495_03925 PF00004 ATPase family associated with various cellular activities (AAA) E0495_03925 PF02861 Clp amino terminal domain, pathogenicity island component E0495_03925 PF17871 AAA lid domain E0495_03925 PF10431 C-terminal, D2-small domain, of ClpB protein E0495_03930 PF05088 Bacterial NAD-glutamate dehydrogenase E0495_03940 PF00990 Diguanylate cyclase, GGDEF domain E0495_03940 PF00072 Response regulator receiver domain E0495_03945 PF02565 Recombination protein O C terminal E0495_03945 PF11967 Recombination protein O N terminal E0495_03970 PF00268 Ribonucleotide reductase, small chain E0495_03980 PF00814 Glycoprotease family E0495_03990 PF00596 Class II Aldolase and Adducin N-terminal domain E0495_04015 PF01523 Putative modulator of DNA gyrase E0495_04020 PF00266 Aminotransferase class-V E0495_04045 PF13840 ACT domain E0495_04045 PF00696 Amino acid kinase family E0495_04045 PF01842 ACT domain E0495_04060 PF13520 Amino acid permease E0495_04080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E0495_04080 PF13288 DXP reductoisomerase C-terminal domain E0495_04080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E0495_04090 PF00005 ABC transporter E0495_04095 PF02405 Permease MlaE E0495_04100 PF01783 Ribosomal L32p protein family E0495_04105 PF02504 Fatty acid synthesis protein E0495_04110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E0495_04110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E0495_04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_04130 PF01926 50S ribosome-binding GTPase E0495_04130 PF12631 MnmE helical domain E0495_04130 PF10396 GTP-binding protein TrmE N-terminus E0495_04135 PF12838 4Fe-4S dicluster domain E0495_04145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E0495_04145 PF03129 Anticodon binding domain E0495_04145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E0495_04150 PF05198 Translation initiation factor IF-3, N-terminal domain E0495_04150 PF00707 Translation initiation factor IF-3, C-terminal domain E0495_04155 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E0495_04155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E0495_04155 PF10531 SLBB domain E0495_04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_04220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E0495_04225 PF02899 Phage integrase, N-terminal SAM-like domain E0495_04225 PF00589 Phage integrase family E0495_04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_04240 PF00578 AhpC/TSA family E0495_04240 PF10417 C-terminal domain of 1-Cys peroxiredoxin E0495_04255 PF00462 Glutaredoxin E0495_04260 PF01687 Riboflavin kinase E0495_04260 PF06574 FAD synthetase E0495_04265 PF01252 Signal peptidase (SPase) II E0495_04270 PF05193 Peptidase M16 inactive domain E0495_04270 PF00675 Insulinase (Peptidase family M16) E0495_04280 PF00551 Formyl transferase E0495_04300 PF01668 SmpB protein E0495_04305 PF01790 Prolipoprotein diacylglyceryl transferase E0495_04310 PF00005 ABC transporter E0495_04310 PF00664 ABC transporter transmembrane region E0495_04335 PF00436 Single-strand binding protein family E0495_04340 PF00701 Dihydrodipicolinate synthetase family E0495_04345 PF12826 Helix-hairpin-helix motif E0495_04345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E0495_04345 PF03120 NAD-dependent DNA ligase OB-fold domain E0495_04345 PF01653 NAD-dependent DNA ligase adenylation domain E0495_04345 PF00533 BRCA1 C Terminus (BRCT) domain E0495_04350 PF00749 tRNA synthetases class I (E and Q), catalytic domain E0495_04355 PF14579 Helix-hairpin-helix motif E0495_04355 PF02811 PHP domain E0495_04355 PF07733 Bacterial DNA polymerase III alpha NTPase domain E0495_04355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E0495_04360 PF01250 Ribosomal protein S6 E0495_04365 PF01084 Ribosomal protein S18 E0495_04370 PF03948 Ribosomal protein L9, C-terminal domain E0495_04370 PF01281 Ribosomal protein L9, N-terminal domain E0495_04380 PF10397 Adenylosuccinate lyase C-terminus E0495_04380 PF00206 Lyase E0495_04400 PF13685 Iron-containing alcohol dehydrogenase E0495_04405 PF01546 Peptidase family M20/M25/M40 E0495_04405 PF07687 Peptidase dimerisation domain E0495_04410 PF10576 Iron-sulfur binding domain of endonuclease III E0495_04410 PF00633 Helix-hairpin-helix motif E0495_04410 PF00730 HhH-GPD superfamily base excision DNA repair protein E0495_04420 PF18324 Hypothetical protein TT1725 E0495_04420 PF00180 Isocitrate/isopropylmalate dehydrogenase E0495_04490 PF00183 Hsp90 protein E0495_04510 PF02401 LytB protein E0495_04515 PF00905 Penicillin binding protein transpeptidase domain E0495_04515 PF03717 Penicillin-binding Protein dimerisation domain E0495_04555 PF00692 dUTPase E0495_04560 PF00696 Amino acid kinase family E0495_04565 PF01926 50S ribosome-binding GTPase E0495_04570 PF00472 RF-1 domain E0495_04570 PF03462 PCRF domain E0495_04625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E0495_04630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E0495_04640 PF00483 Nucleotidyl transferase E0495_04640 PF01050 Mannose-6-phosphate isomerase E0495_04645 PF02687 FtsX-like permease family E0495_04645 PF12704 MacB-like periplasmic core domain E0495_04660 PF00231 ATP synthase E0495_04665 PF01523 Putative modulator of DNA gyrase E0495_04670 PF00313 'Cold-shock' DNA-binding domain E0495_04675 PF00270 DEAD/DEAH box helicase E0495_04675 PF00271 Helicase conserved C-terminal domain E0495_04680 PF02861 Clp amino terminal domain, pathogenicity island component E0495_04680 PF17871 AAA lid domain E0495_04680 PF07724 AAA domain (Cdc48 subfamily) E0495_04680 PF00004 ATPase family associated with various cellular activities (AAA) E0495_04680 PF10431 C-terminal, D2-small domain, of ClpB protein E0495_04685 PF01791 DeoC/LacD family aldolase E0495_04695 PF01180 Dihydroorotate dehydrogenase E0495_04700 PF00035 Double-stranded RNA binding motif E0495_04700 PF14622 Ribonuclease-III-like E0495_04725 PF00186 Dihydrofolate reductase E0495_04730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E0495_04730 PF00809 Pterin binding enzyme E0495_04740 PF03070 TENA/THI-4/PQQC family E0495_04750 PF00085 Thioredoxin E0495_04790 PF00665 Integrase core domain E0495_04790 PF13333 Integrase core domain E0495_04790 PF13276 HTH-like domain E0495_04815 PF01513 ATP-NAD kinase E0495_04820 PF01197 Ribosomal protein L31 E0495_04825 PF00698 Acyl transferase domain E0495_04830 PF01676 Metalloenzyme superfamily E0495_04830 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E0495_04845 PF01808 AICARFT/IMPCHase bienzyme E0495_04845 PF02142 MGS-like domain E0495_04850 PF00551 Formyl transferase E0495_04850 PF02911 Formyl transferase, C-terminal domain E0495_04855 PF00453 Ribosomal protein L20 E0495_04860 PF01632 Ribosomal protein L35 E0495_04870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E0495_04870 PF01411 tRNA synthetases class II (A) E0495_04870 PF02272 DHHA1 domain E0495_04890 PF01921 tRNA synthetases class I (K) E0495_04900 PF03135 CagE, TrbE, VirB family, component of type IV transporter system E0495_04905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein E0495_04910 PF04610 TrbL/VirB6 plasmid conjugal transfer protein E0495_04915 PF04610 TrbL/VirB6 plasmid conjugal transfer protein E0495_04920 PF04610 TrbL/VirB6 plasmid conjugal transfer protein E0495_04945 PF08245 Mur ligase middle domain E0495_04950 PF00111 2Fe-2S iron-sulfur cluster binding domain E0495_04960 PF03918 Cytochrome C biogenesis protein E0495_04990 PF00271 Helicase conserved C-terminal domain E0495_04990 PF02151 UvrB/uvrC motif E0495_04990 PF17757 UvrB interaction domain E0495_04990 PF12344 Ultra-violet resistance protein B E0495_04990 PF04851 Type III restriction enzyme, res subunit E0495_05005 PF02355 Protein export membrane protein E0495_05005 PF07549 SecD/SecF GG Motif E0495_05015 PF02096 60Kd inner membrane protein E0495_05015 PF14849 YidC periplasmic domain E0495_05020 PF00885 6,7-dimethyl-8-ribityllumazine synthase E0495_05025 PF01029 NusB family E0495_05050 PF02195 ParB-like nuclease domain E0495_05050 PF17762 HTH domain found in ParB protein E0495_05055 PF13614 AAA domain E0495_05060 PF00072 Response regulator receiver domain E0495_05060 PF13188 PAS domain E0495_05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E0495_05060 PF00512 His Kinase A (phospho-acceptor) domain E0495_05060 PF08448 PAS fold E0495_05065 PF01218 Coproporphyrinogen III oxidase E0495_05080 PF04452 RNA methyltransferase E0495_05095 PF00549 CoA-ligase E0495_05095 PF08442 ATP-grasp domain E0495_05100 PF02629 CoA binding domain E0495_05100 PF00549 CoA-ligase E0495_05105 PF01678 Diaminopimelate epimerase E0495_05110 PF00881 Nitroreductase family E0495_05115 PF02632 BioY family E0495_05130 PF01348 Type II intron maturase E0495_05130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_05145 PF03989 DNA gyrase C-terminal domain, beta-propeller E0495_05145 PF00521 DNA gyrase/topoisomerase IV, subunit A E0495_05150 PF00355 Rieske [2Fe-2S] domain E0495_05150 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E0495_05155 PF18074 Primosomal protein N C-terminal domain E0495_05155 PF17764 3′ DNA-binding domain (3′BD) E0495_05155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E0495_05155 PF00270 DEAD/DEAH box helicase E0495_05155 PF00271 Helicase conserved C-terminal domain E0495_05165 PF02511 Thymidylate synthase complementing protein E0495_05170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E0495_05180 PF02801 Beta-ketoacyl synthase, C-terminal domain E0495_05180 PF00109 Beta-ketoacyl synthase, N-terminal domain E0495_05185 PF00550 Phosphopantetheine attachment site E0495_05190 PF00348 Polyprenyl synthetase E0495_05200 PF00004 ATPase family associated with various cellular activities (AAA) E0495_05200 PF07724 AAA domain (Cdc48 subfamily) E0495_05200 PF10431 C-terminal, D2-small domain, of ClpB protein E0495_05205 PF00227 Proteasome subunit E0495_05220 PF00762 Ferrochelatase E0495_05230 PF00334 Nucleoside diphosphate kinase E0495_05240 PF02132 RecR protein E0495_05240 PF13662 Toprim domain E0495_05255 PF02817 e3 binding domain E0495_05255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E0495_05255 PF00364 Biotin-requiring enzyme E0495_05275 PF03135 CagE, TrbE, VirB family, component of type IV transporter system E0495_05290 PF03060 Nitronate monooxygenase E0495_05305 PF00162 Phosphoglycerate kinase E0495_05315 PF01219 Prokaryotic diacylglycerol kinase E0495_05320 PF00849 RNA pseudouridylate synthase E0495_05330 PF00753 Metallo-beta-lactamase superfamily E0495_05330 PF03772 Competence protein E0495_05340 PF01243 Pyridoxamine 5'-phosphate oxidase E0495_05340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E0495_05345 PF06827 Zinc finger found in FPG and IleRS E0495_05345 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E0495_05345 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E0495_05355 PF01039 Carboxyl transferase domain E0495_05375 PF01926 50S ribosome-binding GTPase E0495_05375 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E0495_05405 PF00953 Glycosyl transferase family 4 E0495_05410 PF01351 Ribonuclease HII E0495_05430 PF00361 Proton-conducting membrane transporter E0495_05435 PF01098 Cell cycle protein E0495_05440 PF00156 Phosphoribosyl transferase domain E0495_05440 PF13537 Glutamine amidotransferase domain E0495_05445 PF02245 Methylpurine-DNA glycosylase (MPG) E0495_05450 PF17864 RuvB AAA lid domain E0495_05450 PF05491 RuvB C-terminal winged helix domain E0495_05450 PF05496 Holliday junction DNA helicase RuvB P-loop domain E0495_05455 PF07499 RuvA, C-terminal domain E0495_05455 PF01330 RuvA N terminal domain E0495_05470 PF00579 tRNA synthetases class I (W and Y) E0495_05490 PF00293 NUDIX domain E0495_05495 PF01026 TatD related DNase E0495_05500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E0495_05500 PF00056 lactate/malate dehydrogenase, NAD binding domain E0495_05505 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E0495_05510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E0495_05515 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E0495_05520 PF01230 HIT domain E0495_05535 PF01225 Mur ligase family, catalytic domain E0495_05535 PF08245 Mur ligase middle domain E0495_05535 PF02875 Mur ligase family, glutamate ligase domain E0495_05575 PF01131 DNA topoisomerase E0495_05575 PF01751 Toprim domain E0495_05575 PF13368 Topoisomerase C-terminal repeat E0495_05575 PF01396 Topoisomerase DNA binding C4 zinc finger E0495_05585 PF00528 Binding-protein-dependent transport system inner membrane component E0495_05595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E0495_05595 PF01348 Type II intron maturase E0495_05610 PF04379 ApaG domain E0495_05615 PF02222 ATP-grasp domain E0495_05615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E0495_05625 PF02542 YgbB family E0495_05625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E0495_05630 PF01594 AI-2E family transporter E0495_05640 PF00589 Phage integrase family E0495_05640 PF02899 Phage integrase, N-terminal SAM-like domain E0495_05650 PF01649 Ribosomal protein S20 E0495_05655 PF00285 Citrate synthase, C-terminal domain E0495_05695 PF13333 Integrase core domain E0495_05695 PF00665 Integrase core domain E0495_05695 PF13276 HTH-like domain E0495_05700 PF02646 RmuC family E0495_05705 PF01609 Transposase DDE domain E0495_05750 PF00210 Ferritin-like domain E0495_05760 PF02254 TrkA-N domain E0495_05760 PF00999 Sodium/hydrogen exchanger family E0495_05770 PF02223 Thymidylate kinase E0495_05780 PF06480 FtsH Extracellular E0495_05780 PF01434 Peptidase family M41 E0495_05780 PF17862 AAA+ lid domain E0495_05780 PF00004 ATPase family associated with various cellular activities (AAA) E0495_05785 PF01171 PP-loop family E0495_05790 PF00691 OmpA family E0495_05835 PF00580 UvrD/REP helicase N-terminal domain E0495_05835 PF13361 UvrD-like helicase C-terminal domain E0495_05860 PF02774 Semialdehyde dehydrogenase, dimerisation domain E0495_05860 PF01118 Semialdehyde dehydrogenase, NAD binding domain E0495_05870 PF08032 RNA 2'-O ribose methyltransferase substrate binding E0495_05870 PF00588 SpoU rRNA Methylase family E0495_05875 PF01027 Inhibitor of apoptosis-promoting Bax1 E0495_05880 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 E0495_05885 PF00107 Zinc-binding dehydrogenase E0495_05885 PF08240 Alcohol dehydrogenase GroES-like domain E0495_05925 PF03109 ABC1 family E0495_05930 PF00005 ABC transporter E0495_05935 PF01297 Zinc-uptake complex component A periplasmic E0495_05945 PF00471 Ribosomal protein L33 E0495_05950 PF12111 Polyribonucleotide phosphorylase C terminal E0495_05950 PF00575 S1 RNA binding domain E0495_05950 PF10150 Ribonuclease E/G family E0495_05955 PF00012 Hsp70 protein E0495_05965 PF01053 Cys/Met metabolism PLP-dependent enzyme E0495_05970 PF02875 Mur ligase family, glutamate ligase domain E0495_05970 PF08245 Mur ligase middle domain E0495_05985 PF01509 TruB family pseudouridylate synthase (N terminal domain) E0495_05985 PF16198 tRNA pseudouridylate synthase B C-terminal domain E0495_05990 PF00312 Ribosomal protein S15 E0495_05995 PF00575 S1 RNA binding domain E0495_05995 PF03725 3' exoribonuclease family, domain 2 E0495_05995 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E0495_05995 PF01138 3' exoribonuclease family, domain 1 E0495_05995 PF00013 KH domain E0495_06055 PF13180 PDZ domain E0495_06060 PF01145 SPFH domain / Band 7 family E0495_06065 PF01145 SPFH domain / Band 7 family E0495_06105 PF17191 RecG wedge domain E0495_06105 PF00271 Helicase conserved C-terminal domain E0495_06105 PF00270 DEAD/DEAH box helicase E0495_06135 PF00528 Binding-protein-dependent transport system inner membrane component E0495_06145 PF01245 Ribosomal protein L19 E0495_06150 PF01746 tRNA (Guanine-1)-methyltransferase E0495_06155 PF01259 SAICAR synthetase E0495_06160 PF02769 AIR synthase related protein, C-terminal domain E0495_06160 PF00586 AIR synthase related protein, N-terminal domain E0495_06185 PF03471 Transporter associated domain E0495_06185 PF00571 CBS domain E0495_06190 PF01208 Uroporphyrinogen decarboxylase (URO-D) E0495_06220 PF07690 Major Facilitator Superfamily E0495_06230 PF00464 Serine hydroxymethyltransferase E0495_06255 PF01545 Cation efflux family E0495_06265 PF02660 Glycerol-3-phosphate acyltransferase E0495_06270 PF01235 Sodium:alanine symporter family E0495_06275 PF01235 Sodium:alanine symporter family E0495_06280 PF01066 CDP-alcohol phosphatidyltransferase E0495_06285 PF02666 Phosphatidylserine decarboxylase E0495_06290 PF00154 recA bacterial DNA recombination protein E0495_06305 PF00155 Aminotransferase class I and II E0495_06315 PF09285 Elongation factor P, C-terminal E0495_06315 PF01132 Elongation factor P (EF-P) OB domain E0495_06315 PF08207 Elongation factor P (EF-P) KOW-like domain E0495_06320 PF01782 RimM N-terminal domain E0495_06320 PF05239 PRC-barrel domain E0495_06325 PF00202 Aminotransferase class-III E0495_06330 PF00989 PAS fold E0495_06330 PF00512 His Kinase A (phospho-acceptor) domain E0495_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E0495_06335 PF00578 AhpC/TSA family E0495_06340 PF02463 RecF/RecN/SMC N terminal domain E0495_06370 PF07497 Rho termination factor, RNA-binding domain E0495_06370 PF07498 Rho termination factor, N-terminal domain E0495_06370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E0495_06380 PF00639 PPIC-type PPIASE domain E0495_06385 PF00886 Ribosomal protein S16 E0495_06390 PF00348 Polyprenyl synthetase E0495_06395 PF01025 GrpE E0495_06400 PF00579 tRNA synthetases class I (W and Y) E0495_06410 PF00034 Cytochrome c E0495_06430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E0495_06430 PF03129 Anticodon binding domain E0495_06435 PF01648 4'-phosphopantetheinyl transferase superfamily E0495_06445 PF13244 Domain of unknown function (DUF4040) E0495_06445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E0495_06445 PF00361 Proton-conducting membrane transporter E0495_06465 PF01300 Telomere recombination E0495_06560 PF00586 AIR synthase related protein, N-terminal domain E0495_06560 PF02769 AIR synthase related protein, C-terminal domain E0495_06560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E0495_06570 PF17760 UvrA interaction domain E0495_06570 PF17755 UvrA DNA-binding domain E0495_06615 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E0495_06620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E0495_06625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E0495_06625 PF00361 Proton-conducting membrane transporter E0495_06630 PF00361 Proton-conducting membrane transporter E0495_06635 PF00361 Proton-conducting membrane transporter E0495_06640 PF02237 Biotin protein ligase C terminal domain E0495_06640 PF08279 HTH domain E0495_06640 PF03099 Biotin/lipoate A/B protein ligase family E0495_06645 PF03100 CcmE E0495_06705 PF02875 Mur ligase family, glutamate ligase domain E0495_06705 PF08245 Mur ligase middle domain E0495_06720 PF03364 Polyketide cyclase / dehydrase and lipid transport E0495_06725 PF13462 Thioredoxin E0495_06755 PF12169 DNA polymerase III subunits gamma and tau domain III E0495_06760 PF02575 YbaB/EbfC DNA-binding family E0495_06765 PF13505 Outer membrane protein beta-barrel domain E0495_06770 PF04542 Sigma-70 region 2 E0495_06770 PF00140 Sigma-70 factor, region 1.2 E0495_06770 PF04545 Sigma-70, region 4 E0495_06780 PF02767 DNA polymerase III beta subunit, central domain E0495_06780 PF02768 DNA polymerase III beta subunit, C-terminal domain E0495_06780 PF00712 DNA polymerase III beta subunit, N-terminal domain E0495_06785 PF01416 tRNA pseudouridine synthase E0495_06805 PF00032 Cytochrome b(C-terminal)/b6/petD E0495_06805 PF00033 Cytochrome b/b6/petB E0495_06805 PF02167 Cytochrome C1 family E0495_06810 PF00033 Cytochrome b/b6/petB E0495_06810 PF00032 Cytochrome b(C-terminal)/b6/petD E0495_06815 PF00684 DnaJ central domain E0495_06815 PF01556 DnaJ C terminal domain E0495_06815 PF00226 DnaJ domain E0495_06825 PF00226 DnaJ domain E0495_06825 PF01556 DnaJ C terminal domain E0495_06825 PF00684 DnaJ central domain E0495_06835 PF13393 Histidyl-tRNA synthetase E0495_06835 PF03129 Anticodon binding domain E0495_06840 PF01975 Survival protein SurE E0495_06850 PF02881 SRP54-type protein, helical bundle domain E0495_06850 PF00448 SRP54-type protein, GTPase domain E0495_06850 PF02978 Signal peptide binding domain E0495_06860 PF07992 Pyridine nucleotide-disulphide oxidoreductase E0495_06865 PF07977 FabA-like domain E0495_06875 PF07244 Surface antigen variable number repeat E0495_06875 PF01103 Surface antigen E0495_06880 PF17820 PDZ domain E0495_06880 PF02163 Peptidase family M50 E0495_06895 PF00216 Bacterial DNA-binding protein E0495_06900 PF00575 S1 RNA binding domain E0495_06905 PF02390 Putative methyltransferase E0495_06915 PF01258 Prokaryotic dksA/traR C4-type zinc finger E0495_06945 PF03631 Virulence factor BrkB E0495_06960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E0495_06960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E0495_06960 PF02142 MGS-like domain E0495_06980 PF03979 Sigma-70 factor, region 1.1 E0495_06980 PF00140 Sigma-70 factor, region 1.2 E0495_06980 PF04545 Sigma-70, region 4 E0495_06980 PF04539 Sigma-70 region 3 E0495_06980 PF04542 Sigma-70 region 2 E0495_06980 PF04546 Sigma-70, non-essential region E0495_06985 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E0495_06995 PF00361 Proton-conducting membrane transporter E0495_06995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E0495_06995 PF13244 Domain of unknown function (DUF4040) E0495_07010 PF01192 RNA polymerase Rpb6 E0495_07020 PF00731 AIR carboxylase E0495_07025 PF08676 MutL C terminal dimerisation domain E0495_07025 PF01119 DNA mismatch repair protein, C-terminal domain E0495_07030 PF02779 Transketolase, pyrimidine binding domain E0495_07030 PF00676 Dehydrogenase E1 component E0495_07030 PF16078 2-oxoglutarate dehydrogenase N-terminus E0495_07030 PF16870 2-oxoglutarate dehydrogenase C-terminal E0495_07050 PF13784 Fic/DOC family N-terminal E0495_07050 PF02661 Fic/DOC family E0495_07055 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E0495_07065 PF01040 UbiA prenyltransferase family E0495_07070 PF02033 Ribosome-binding factor A E0495_07075 PF04760 Translation initiation factor IF-2, N-terminal region E0495_07075 PF11987 Translation-initiation factor 2 E0495_07075 PF00009 Elongation factor Tu GTP binding domain E0495_07080 PF13184 NusA-like KH domain E0495_07080 PF00575 S1 RNA binding domain E0495_07080 PF08529 NusA N-terminal domain E0495_07085 PF00873 AcrB/AcrD/AcrF family E0495_07095 PF00120 Glutamine synthetase, catalytic domain