Xaut_0011	PWY-6349	CDP-archaeol biosynthesis
Xaut_0013	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_0013	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_0015	PWY-7399	methylphosphonate degradation II
Xaut_0015	PWY-7805	Xaut_0015
Xaut_0015	PWY-7807	Xaut_0015
Xaut_0017	PWY-7942	Xaut_0017
Xaut_0023	PWY-6599	guanine and guanosine salvage II
Xaut_0023	PWY-6609	adenine and adenosine salvage III
Xaut_0023	PWY-6610	adenine and adenosine salvage IV
Xaut_0023	PWY-6620	guanine and guanosine salvage
Xaut_0032	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Xaut_0032	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_0032	PWY-7796	Xaut_0032
Xaut_0037	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_0052	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_0052	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_0052	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_0052	PWY-6113	superpathway of mycolate biosynthesis
Xaut_0052	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_0052	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_0052	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_0052	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_0052	PWY-7858	Xaut_0052
Xaut_0052	PWYG-321	mycolate biosynthesis
Xaut_0054	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_0054	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_0054	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_0054	PWY-5994	palmitate biosynthesis I (animals and fungi)
Xaut_0054	PWY-6113	superpathway of mycolate biosynthesis
Xaut_0054	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_0054	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_0054	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Xaut_0054	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_0054	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_0054	PWY-7858	Xaut_0054
Xaut_0054	PWYG-321	mycolate biosynthesis
Xaut_0056	PWY-5686	UMP biosynthesis
Xaut_0057	PWY-5686	UMP biosynthesis
Xaut_0057	PWY-7790	Xaut_0057
Xaut_0057	PWY-7791	Xaut_0057
Xaut_0070	PWY-5101	L-isoleucine biosynthesis II
Xaut_0070	PWY-5103	L-isoleucine biosynthesis III
Xaut_0070	PWY-5104	L-isoleucine biosynthesis IV
Xaut_0070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_0075	PWY-6936	seleno-amino acid biosynthesis
Xaut_0078	PWY-7851	Xaut_0078
Xaut_0087	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Xaut_0100	PWY-5350	thiosulfate disproportionation III (rhodanese)
Xaut_0100	PWY-7927	Xaut_0100
Xaut_0108	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Xaut_0111	PWY-6823	molybdenum cofactor biosynthesis
Xaut_0148	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_0150	PWY-3081	L-lysine biosynthesis V
Xaut_0150	PWY-6871	3-methylbutanol biosynthesis
Xaut_0150	PWY-7710	Xaut_0150
Xaut_0151	PWY-6936	seleno-amino acid biosynthesis
Xaut_0151	PWY-7274	D-cycloserine biosynthesis
Xaut_0151	PWY-7870	Xaut_0151
Xaut_0153	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_0153	PWY-5392	reductive TCA cycle II
Xaut_0153	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_0153	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0153	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0153	PWY-6728	methylaspartate cycle
Xaut_0153	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0153	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_0153	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_0154	PWY-5392	reductive TCA cycle II
Xaut_0154	PWY-5537	pyruvate fermentation to acetate V
Xaut_0154	PWY-5538	pyruvate fermentation to acetate VI
Xaut_0154	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0154	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0154	PWY-6728	methylaspartate cycle
Xaut_0154	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0154	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_0155	PWY-5392	reductive TCA cycle II
Xaut_0155	PWY-5537	pyruvate fermentation to acetate V
Xaut_0155	PWY-5538	pyruvate fermentation to acetate VI
Xaut_0155	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0155	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0155	PWY-6728	methylaspartate cycle
Xaut_0155	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0155	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_0156	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Xaut_0158	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Xaut_0159	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Xaut_0159	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Xaut_0186	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Xaut_0206	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_0206	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_0206	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_0206	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_0214	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_0214	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_0214	PWY-7560	methylerythritol phosphate pathway II
Xaut_0258	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_0258	PWY-5392	reductive TCA cycle II
Xaut_0258	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_0258	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0258	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0258	PWY-6728	methylaspartate cycle
Xaut_0258	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0258	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_0258	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_0278	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_0318	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_0318	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Xaut_0318	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0318	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_0318	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Xaut_0318	PWY-6549	L-glutamine biosynthesis III
Xaut_0318	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_0318	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Xaut_0318	PWY-7124	ethylene biosynthesis V (engineered)
Xaut_0324	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_0324	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_0324	PWY-7953	Xaut_0324
Xaut_0325	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_0325	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_0325	PWY-7953	Xaut_0325
Xaut_0357	PWY-5686	UMP biosynthesis
Xaut_0357	PWY-7790	Xaut_0357
Xaut_0357	PWY-7791	Xaut_0357
Xaut_0359	PWY-2941	L-lysine biosynthesis II
Xaut_0359	PWY-2942	L-lysine biosynthesis III
Xaut_0359	PWY-5097	L-lysine biosynthesis VI
Xaut_0360	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_0360	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_0362	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_0362	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_0362	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_0362	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_0375	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_0389	PWY-3801	sucrose degradation II (sucrose synthase)
Xaut_0389	PWY-6527	stachyose degradation
Xaut_0389	PWY-7238	sucrose biosynthesis II
Xaut_0389	PWY-7343	UDP-glucose biosynthesis
Xaut_0389	PWY-7817	Xaut_0389
Xaut_0393	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Xaut_0395	PWY-3461	L-tyrosine biosynthesis II
Xaut_0395	PWY-3462	L-phenylalanine biosynthesis II
Xaut_0395	PWY-6120	L-tyrosine biosynthesis III
Xaut_0395	PWY-6627	salinosporamide A biosynthesis
Xaut_0395	PWY-7626	bacilysin biosynthesis
Xaut_0404	PWY-7887	Xaut_0404
Xaut_0404	PWY-7892	Xaut_0404
Xaut_0407	PWY-7511	protein ubiquitylation
Xaut_0411	PWY-2941	L-lysine biosynthesis II
Xaut_0411	PWY-5097	L-lysine biosynthesis VI
Xaut_0427	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0427	PWY-5109	2-methylbutanoate biosynthesis
Xaut_0427	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_0427	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_0427	PWY-5177	glutaryl-CoA degradation
Xaut_0427	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_0427	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_0427	PWY-6583	pyruvate fermentation to butanol I
Xaut_0427	PWY-6863	pyruvate fermentation to hexanol
Xaut_0427	PWY-6883	pyruvate fermentation to butanol II
Xaut_0427	PWY-6944	androstenedione degradation
Xaut_0427	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_0427	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_0427	PWY-7007	methyl ketone biosynthesis
Xaut_0427	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_0427	PWY-7094	fatty acid salvage
Xaut_0427	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_0427	PWY-735	jasmonic acid biosynthesis
Xaut_0427	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_0427	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_0427	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_0427	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_0427	PWY-7726	Xaut_0427
Xaut_0427	PWY-7778	Xaut_0427
Xaut_0427	PWY-7779	Xaut_0427
Xaut_0445	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_0451	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Xaut_0452	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Xaut_0459	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_0459	PWY-4521	arsenite oxidation I (respiratory)
Xaut_0459	PWY-6692	Fe(II) oxidation
Xaut_0459	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_0486	PWY-6695	oxalate degradation II
Xaut_0486	PWY-6696	oxalate degradation III
Xaut_0486	PWY-7985	Xaut_0486
Xaut_0487	PWY-6695	oxalate degradation II
Xaut_0489	PWY-6695	oxalate degradation II
Xaut_0490	PWY-5392	reductive TCA cycle II
Xaut_0490	PWY-5537	pyruvate fermentation to acetate V
Xaut_0490	PWY-5538	pyruvate fermentation to acetate VI
Xaut_0490	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0490	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0490	PWY-6728	methylaspartate cycle
Xaut_0490	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0490	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_0491	PWY-5392	reductive TCA cycle II
Xaut_0491	PWY-5537	pyruvate fermentation to acetate V
Xaut_0491	PWY-5538	pyruvate fermentation to acetate VI
Xaut_0491	PWY-5690	TCA cycle II (plants and fungi)
Xaut_0491	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_0491	PWY-6728	methylaspartate cycle
Xaut_0491	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_0491	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_0494	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Xaut_0494	PWY-6549	L-glutamine biosynthesis III
Xaut_0494	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_0494	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Xaut_0509	PWY-4381	fatty acid biosynthesis initiation I
Xaut_0509	PWY-5743	3-hydroxypropanoate cycle
Xaut_0509	PWY-5744	glyoxylate assimilation
Xaut_0509	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_0509	PWY-6722	candicidin biosynthesis
Xaut_0624	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0624	PWY-5109	2-methylbutanoate biosynthesis
Xaut_0624	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_0624	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_0624	PWY-5177	glutaryl-CoA degradation
Xaut_0624	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_0624	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_0624	PWY-6583	pyruvate fermentation to butanol I
Xaut_0624	PWY-6863	pyruvate fermentation to hexanol
Xaut_0624	PWY-6883	pyruvate fermentation to butanol II
Xaut_0624	PWY-6944	androstenedione degradation
Xaut_0624	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_0624	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_0624	PWY-7007	methyl ketone biosynthesis
Xaut_0624	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_0624	PWY-7094	fatty acid salvage
Xaut_0624	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_0624	PWY-735	jasmonic acid biosynthesis
Xaut_0624	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_0624	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_0624	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_0624	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_0624	PWY-7726	Xaut_0624
Xaut_0624	PWY-7778	Xaut_0624
Xaut_0624	PWY-7779	Xaut_0624
Xaut_0653	PWY-6454	vancomycin resistance I
Xaut_0653	PWY-6455	vancomycin resistance II
Xaut_0666	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Xaut_0835	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_0835	PWY-5723	Rubisco shunt
Xaut_0861	PWY-7533	gliotoxin biosynthesis
Xaut_0866	PWY-3661	glycine betaine degradation I
Xaut_0866	PWY-4722	creatinine degradation II
Xaut_0867	PWY-3661	glycine betaine degradation I
Xaut_0867	PWY-4722	creatinine degradation II
Xaut_0868	PWY-3661	glycine betaine degradation I
Xaut_0868	PWY-4722	creatinine degradation II
Xaut_0869	PWY-3661	glycine betaine degradation I
Xaut_0869	PWY-4722	creatinine degradation II
Xaut_0870	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_0870	PWY-181	photorespiration
Xaut_0870	PWY-2161	folate polyglutamylation
Xaut_0870	PWY-2201	folate transformations I
Xaut_0870	PWY-3661	glycine betaine degradation I
Xaut_0870	PWY-3661-1	glycine betaine degradation II (mammalian)
Xaut_0870	PWY-3841	folate transformations II
Xaut_0870	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_0876	PWY-4202	arsenate detoxification I (glutaredoxin)
Xaut_0876	PWY-4621	arsenate detoxification II (glutaredoxin)
Xaut_0887	PWY-381	nitrate reduction II (assimilatory)
Xaut_0887	PWY-5675	nitrate reduction V (assimilatory)
Xaut_0887	PWY-6549	L-glutamine biosynthesis III
Xaut_0887	PWY-6963	ammonia assimilation cycle I
Xaut_0887	PWY-6964	ammonia assimilation cycle II
Xaut_0901	PWY-1341	phenylacetate degradation II (anaerobic)
Xaut_0901	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Xaut_0901	PWY-7716	Xaut_0901
Xaut_0905	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0905	PWY-2361	3-oxoadipate degradation
Xaut_0905	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_0906	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0906	PWY-5109	2-methylbutanoate biosynthesis
Xaut_0906	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_0906	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_0906	PWY-5177	glutaryl-CoA degradation
Xaut_0906	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_0906	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_0906	PWY-6583	pyruvate fermentation to butanol I
Xaut_0906	PWY-6863	pyruvate fermentation to hexanol
Xaut_0906	PWY-6883	pyruvate fermentation to butanol II
Xaut_0906	PWY-6944	androstenedione degradation
Xaut_0906	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_0906	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_0906	PWY-7007	methyl ketone biosynthesis
Xaut_0906	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_0906	PWY-7094	fatty acid salvage
Xaut_0906	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_0906	PWY-735	jasmonic acid biosynthesis
Xaut_0906	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_0906	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_0906	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_0906	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_0906	PWY-7726	Xaut_0906
Xaut_0906	PWY-7778	Xaut_0906
Xaut_0906	PWY-7779	Xaut_0906
Xaut_0912	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Xaut_0915	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0915	PWY-5109	2-methylbutanoate biosynthesis
Xaut_0915	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_0915	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_0915	PWY-5177	glutaryl-CoA degradation
Xaut_0915	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_0915	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_0915	PWY-6583	pyruvate fermentation to butanol I
Xaut_0915	PWY-6863	pyruvate fermentation to hexanol
Xaut_0915	PWY-6883	pyruvate fermentation to butanol II
Xaut_0915	PWY-6944	androstenedione degradation
Xaut_0915	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_0915	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_0915	PWY-7007	methyl ketone biosynthesis
Xaut_0915	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_0915	PWY-7094	fatty acid salvage
Xaut_0915	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_0915	PWY-735	jasmonic acid biosynthesis
Xaut_0915	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_0915	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_0915	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_0915	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_0915	PWY-7726	Xaut_0915
Xaut_0915	PWY-7778	Xaut_0915
Xaut_0915	PWY-7779	Xaut_0915
Xaut_0916	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_0916	PWY-2361	3-oxoadipate degradation
Xaut_0916	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_0932	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
Xaut_0935	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
Xaut_0937	PWY-5162	2-oxopentenoate degradation
Xaut_0937	PWY-5436	L-threonine degradation IV
Xaut_0937	PWY-5480	pyruvate fermentation to ethanol I
Xaut_0937	PWY-6587	pyruvate fermentation to ethanol III
Xaut_0937	PWY-7085	triethylamine degradation
Xaut_0937	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Xaut_0938	PWY-5162	2-oxopentenoate degradation
Xaut_0964	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
Xaut_0969	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Xaut_0969	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Xaut_0978	PWY-7425	2-chloroacrylate degradation I
Xaut_1002	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_1002	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_1002	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_1002	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_1014	PWY-6012	acyl carrier protein metabolism I
Xaut_1014	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Xaut_1014	PWY-6289	petrobactin biosynthesis
Xaut_1017	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Xaut_1018	PWY-5101	L-isoleucine biosynthesis II
Xaut_1018	PWY-5103	L-isoleucine biosynthesis III
Xaut_1018	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1018	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1019	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Xaut_1019	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Xaut_1019	PWY-7242	D-fructuronate degradation
Xaut_1019	PWY-7310	D-glucosaminate degradation
Xaut_1019	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
Xaut_1020	PWY-6317	galactose degradation I (Leloir pathway)
Xaut_1022	PWY-5101	L-isoleucine biosynthesis II
Xaut_1022	PWY-5103	L-isoleucine biosynthesis III
Xaut_1022	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1022	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1023	PWY-7731	Xaut_1023
Xaut_1036	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_1036	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Xaut_1036	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Xaut_1052	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_1077	PWY-5194	siroheme biosynthesis
Xaut_1077	PWY-5196	factor 430 biosynthesis
Xaut_1077	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Xaut_1080	PWY-6683	sulfate reduction III (assimilatory)
Xaut_1111	PWY-7205	CMP phosphorylation
Xaut_1112	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_1117	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Xaut_1118	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_1121	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_1122	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_1122	PWY-2361	3-oxoadipate degradation
Xaut_1122	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_1141	PWY-381	nitrate reduction II (assimilatory)
Xaut_1141	PWY-5675	nitrate reduction V (assimilatory)
Xaut_1141	PWY-6549	L-glutamine biosynthesis III
Xaut_1141	PWY-6963	ammonia assimilation cycle I
Xaut_1141	PWY-6964	ammonia assimilation cycle II
Xaut_1156	PWY-5667	CDP-diacylglycerol biosynthesis I
Xaut_1156	PWY-5981	CDP-diacylglycerol biosynthesis III
Xaut_1156	PWY-7902	Xaut_1156
Xaut_1158	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_1158	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Xaut_1159	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_1159	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Xaut_1181	PWY-5316	nicotine biosynthesis
Xaut_1181	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_1181	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Xaut_1181	PWY-7342	superpathway of nicotine biosynthesis
Xaut_1182	PWY-5316	nicotine biosynthesis
Xaut_1182	PWY-7342	superpathway of nicotine biosynthesis
Xaut_1183	PWY-5316	nicotine biosynthesis
Xaut_1183	PWY-7342	superpathway of nicotine biosynthesis
Xaut_1190	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_1190	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_1190	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_1190	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_1191	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_1191	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_1191	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_1191	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_1192	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_1192	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_1192	PWY-7953	Xaut_1192
Xaut_1194	PWY-6556	pyrimidine ribonucleosides salvage II
Xaut_1194	PWY-7181	pyrimidine deoxyribonucleosides degradation
Xaut_1194	PWY-7193	pyrimidine ribonucleosides salvage I
Xaut_1194	PWY-7199	pyrimidine deoxyribonucleosides salvage
Xaut_1214	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_1214	PWY-4521	arsenite oxidation I (respiratory)
Xaut_1214	PWY-6692	Fe(II) oxidation
Xaut_1214	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_1219	PWY-4981	L-proline biosynthesis II (from arginine)
Xaut_1219	PWY-4984	urea cycle
Xaut_1219	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_1222	PWY-5169	cyanurate degradation
Xaut_1222	PWY-5703	urea degradation I
Xaut_1235	PWY-5530	sorbitol biosynthesis II
Xaut_1235	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_1243	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_1243	PWY-5686	UMP biosynthesis
Xaut_1243	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_1243	PWY-7790	Xaut_1243
Xaut_1243	PWY-7791	Xaut_1243
Xaut_1246	PWY-6695	oxalate degradation II
Xaut_1250	PWY-3801	sucrose degradation II (sucrose synthase)
Xaut_1250	PWY-5054	sorbitol biosynthesis I
Xaut_1250	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Xaut_1250	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Xaut_1250	PWY-5659	GDP-mannose biosynthesis
Xaut_1250	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_1250	PWY-621	sucrose degradation III (sucrose invertase)
Xaut_1250	PWY-622	starch biosynthesis
Xaut_1250	PWY-6981	chitin biosynthesis
Xaut_1250	PWY-6992	1,5-anhydrofructose degradation
Xaut_1250	PWY-7238	sucrose biosynthesis II
Xaut_1250	PWY-7347	sucrose biosynthesis III
Xaut_1250	PWY-7385	1,3-propanediol biosynthesis (engineered)
Xaut_1251	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Xaut_1251	PWY-6855	chitin degradation I (archaea)
Xaut_1251	PWY-6906	chitin derivatives degradation
Xaut_1252	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Xaut_1256	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_1256	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_1262	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_1262	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_1262	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_1262	PWY-5994	palmitate biosynthesis I (animals and fungi)
Xaut_1262	PWY-6113	superpathway of mycolate biosynthesis
Xaut_1262	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_1262	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_1262	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Xaut_1262	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_1262	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_1262	PWY-7858	Xaut_1262
Xaut_1262	PWYG-321	mycolate biosynthesis
Xaut_1309	PWY-7805	Xaut_1309
Xaut_1309	PWY-7807	Xaut_1309
Xaut_1310	PWY-7399	methylphosphonate degradation II
Xaut_1310	PWY-7805	Xaut_1310
Xaut_1310	PWY-7807	Xaut_1310
Xaut_1311	PWY-7399	methylphosphonate degradation II
Xaut_1311	PWY-7805	Xaut_1311
Xaut_1311	PWY-7807	Xaut_1311
Xaut_1313	PWY-7399	methylphosphonate degradation II
Xaut_1313	PWY-7805	Xaut_1313
Xaut_1313	PWY-7807	Xaut_1313
Xaut_1316	PWY-7399	methylphosphonate degradation II
Xaut_1316	PWY-7805	Xaut_1316
Xaut_1316	PWY-7807	Xaut_1316
Xaut_1318	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Xaut_1318	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Xaut_1323	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_1325	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Xaut_1325	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Xaut_1329	PWY-6871	3-methylbutanol biosynthesis
Xaut_1360	PWY-5392	reductive TCA cycle II
Xaut_1360	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_1360	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1360	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_1360	PWY-6728	methylaspartate cycle
Xaut_1360	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1360	PWY-7254	TCA cycle VII (acetate-producers)
Xaut_1360	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_1365	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Xaut_1365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1365	PWY-7796	Xaut_1365
Xaut_1377	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_1377	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Xaut_1377	PWY-7761	Xaut_1377
Xaut_1381	PWY-7560	methylerythritol phosphate pathway II
Xaut_1383	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Xaut_1383	PWY-2161	folate polyglutamylation
Xaut_1383	PWY-2201	folate transformations I
Xaut_1383	PWY-3841	folate transformations II
Xaut_1387	PWY-6823	molybdenum cofactor biosynthesis
Xaut_1397	PWY-6683	sulfate reduction III (assimilatory)
Xaut_1399	PWY-5278	sulfite oxidation III
Xaut_1399	PWY-5340	sulfate activation for sulfonation
Xaut_1399	PWY-6683	sulfate reduction III (assimilatory)
Xaut_1399	PWY-6932	selenate reduction
Xaut_1400	PWY-5278	sulfite oxidation III
Xaut_1400	PWY-5340	sulfate activation for sulfonation
Xaut_1400	PWY-6683	sulfate reduction III (assimilatory)
Xaut_1400	PWY-6932	selenate reduction
Xaut_1412	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_1412	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_1412	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_1415	PWY-5686	UMP biosynthesis
Xaut_1415	PWY-7790	Xaut_1415
Xaut_1415	PWY-7791	Xaut_1415
Xaut_1420	PWY-3841	folate transformations II
Xaut_1420	PWY-6614	tetrahydrofolate biosynthesis
Xaut_1428	PWY-5692	allantoin degradation to glyoxylate II
Xaut_1428	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Xaut_1432	PWY-5022	4-aminobutanoate degradation V
Xaut_1432	PWY-6728	methylaspartate cycle
Xaut_1432	PWY-7126	ethylene biosynthesis IV
Xaut_1442	PWY-6654	phosphopantothenate biosynthesis III
Xaut_1479	PWY-5108	L-isoleucine biosynthesis V
Xaut_1479	PWY-5132	humulone biosynthesis
Xaut_1479	PWY-5133	cohumulone biosynthesis
Xaut_1479	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Xaut_1479	PWY-7118	chitin degradation to ethanol
Xaut_1479	PWY-7857	Xaut_1479
Xaut_1482	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
Xaut_1488	PWY-5101	L-isoleucine biosynthesis II
Xaut_1488	PWY-5103	L-isoleucine biosynthesis III
Xaut_1488	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1488	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Xaut_1488	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Xaut_1488	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Xaut_1488	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1489	PWY-5101	L-isoleucine biosynthesis II
Xaut_1489	PWY-5103	L-isoleucine biosynthesis III
Xaut_1489	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1489	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Xaut_1489	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Xaut_1489	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Xaut_1489	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1490	PWY-5103	L-isoleucine biosynthesis III
Xaut_1490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1497	PWY-4041	&gamma;-glutamyl cycle
Xaut_1497	PWY-7942	Xaut_1497
Xaut_1514	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Xaut_1535	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1535	PWY-5723	Rubisco shunt
Xaut_1535	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_1535	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_1535	PWY-6901	superpathway of glucose and xylose degradation
Xaut_1535	PWY-7560	methylerythritol phosphate pathway II
Xaut_1540	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_1540	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_1540	PWY-7560	methylerythritol phosphate pathway II
Xaut_1547	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Xaut_1560	PWY-7824	Xaut_1560
Xaut_1613	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Xaut_1613	PWY-7494	choline degradation IV
Xaut_1616	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_1627	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Xaut_1627	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1627	PWY-7796	Xaut_1627
Xaut_1633	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_1633	PWY-6164	3-dehydroquinate biosynthesis I
Xaut_1643	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Xaut_1643	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Xaut_1643	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Xaut_1649	PWY-5663	tetrahydrobiopterin biosynthesis I
Xaut_1649	PWY-5664	tetrahydrobiopterin biosynthesis II
Xaut_1649	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Xaut_1649	PWY-6703	preQ<sub>0</sub> biosynthesis
Xaut_1649	PWY-6983	tetrahydrobiopterin biosynthesis III
Xaut_1649	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Xaut_1649	PWY-7852	Xaut_1649
Xaut_1653	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_1653	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_1653	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_1653	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_1659	PWY-2781	<i>cis</i>-zeatin biosynthesis
Xaut_1667	PWY-5392	reductive TCA cycle II
Xaut_1667	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_1667	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1667	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_1667	PWY-6728	methylaspartate cycle
Xaut_1667	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1667	PWY-7254	TCA cycle VII (acetate-producers)
Xaut_1667	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_1673	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_1673	PWY-5392	reductive TCA cycle II
Xaut_1673	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_1673	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1673	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_1673	PWY-6728	methylaspartate cycle
Xaut_1673	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1673	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_1673	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_1696	PWY-4381	fatty acid biosynthesis initiation I
Xaut_1696	PWY-5743	3-hydroxypropanoate cycle
Xaut_1696	PWY-5744	glyoxylate assimilation
Xaut_1696	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_1696	PWY-6722	candicidin biosynthesis
Xaut_1697	PWY-2161	folate polyglutamylation
Xaut_1698	PWY-5101	L-isoleucine biosynthesis II
Xaut_1698	PWY-5103	L-isoleucine biosynthesis III
Xaut_1698	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1698	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_1712	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_1712	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_1712	PWY-7560	methylerythritol phosphate pathway II
Xaut_1714	PWY-6349	CDP-archaeol biosynthesis
Xaut_1732	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_1732	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_1732	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_1738	PWY-4983	L-citrulline-nitric oxide cycle
Xaut_1738	PWY-4984	urea cycle
Xaut_1738	PWY-5	canavanine biosynthesis
Xaut_1738	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_1738	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_1740	PWY-2941	L-lysine biosynthesis II
Xaut_1740	PWY-2942	L-lysine biosynthesis III
Xaut_1740	PWY-5097	L-lysine biosynthesis VI
Xaut_1742	PWY-5392	reductive TCA cycle II
Xaut_1742	PWY-5537	pyruvate fermentation to acetate V
Xaut_1742	PWY-5538	pyruvate fermentation to acetate VI
Xaut_1742	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1742	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_1742	PWY-6728	methylaspartate cycle
Xaut_1742	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1742	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_1747	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Xaut_1754	PWY-7805	Xaut_1754
Xaut_1754	PWY-7807	Xaut_1754
Xaut_1788	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Xaut_1788	PWY-7784	Xaut_1788
Xaut_1790	PWY-5254	methanofuran biosynthesis
Xaut_1791	PWY-5254	methanofuran biosynthesis
Xaut_1793	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Xaut_1793	PWY-7784	Xaut_1793
Xaut_1799	PWY-6823	molybdenum cofactor biosynthesis
Xaut_1801	PWY-6420	pyrroloquinoline quinone biosynthesis
Xaut_1807	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
Xaut_1809	PWY-6700	queuosine biosynthesis
Xaut_1816	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Xaut_1816	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Xaut_1824	PWY-7980	Xaut_1824
Xaut_1826	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Xaut_1826	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Xaut_1826	PWY-7766	Xaut_1826
Xaut_1829	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_1830	PWY-7851	Xaut_1830
Xaut_1843	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Xaut_1843	PWY-6167	flavin biosynthesis II (archaea)
Xaut_1843	PWY-6168	flavin biosynthesis III (fungi)
Xaut_1843	PWY-7863	Xaut_1843
Xaut_1845	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_1845	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_1847	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_1847	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_1847	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_1848	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_1848	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_1848	PWY-7953	Xaut_1848
Xaut_1857	PWY-4381	fatty acid biosynthesis initiation I
Xaut_1857	PWY-5743	3-hydroxypropanoate cycle
Xaut_1857	PWY-5744	glyoxylate assimilation
Xaut_1857	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_1857	PWY-6722	candicidin biosynthesis
Xaut_1867	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Xaut_1867	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Xaut_1867	PWY-6897	thiamin salvage II
Xaut_1867	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Xaut_1867	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Xaut_1867	PWY-7356	thiamin salvage IV (yeast)
Xaut_1867	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Xaut_1874	PWY-6703	preQ<sub>0</sub> biosynthesis
Xaut_1877	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Xaut_1878	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Xaut_1901	PWY-5963	thio-molybdenum cofactor biosynthesis
Xaut_1910	PWY-5344	L-homocysteine biosynthesis
Xaut_1911	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1911	PWY-5723	Rubisco shunt
Xaut_1912	PWY-1042	glycolysis IV (plant cytosol)
Xaut_1912	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1912	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_1912	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_1912	PWY-7385	1,3-propanediol biosynthesis (engineered)
Xaut_1913	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_1913	PWY-5723	Rubisco shunt
Xaut_1913	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_1913	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_1913	PWY-6901	superpathway of glucose and xylose degradation
Xaut_1913	PWY-7560	methylerythritol phosphate pathway II
Xaut_1914	PWY-5723	Rubisco shunt
Xaut_1915	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_1917	PWY-5532	adenosine nucleotides degradation IV
Xaut_1917	PWY-5723	Rubisco shunt
Xaut_1918	PWY-5532	adenosine nucleotides degradation IV
Xaut_1918	PWY-5723	Rubisco shunt
Xaut_1929	PWY-6749	CMP-legionaminate biosynthesis I
Xaut_1939	PWY-381	nitrate reduction II (assimilatory)
Xaut_1939	PWY-5675	nitrate reduction V (assimilatory)
Xaut_1939	PWY-6549	L-glutamine biosynthesis III
Xaut_1939	PWY-6963	ammonia assimilation cycle I
Xaut_1939	PWY-6964	ammonia assimilation cycle II
Xaut_1947	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_1947	PWY-4521	arsenite oxidation I (respiratory)
Xaut_1947	PWY-6692	Fe(II) oxidation
Xaut_1947	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_1964	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_1964	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Xaut_1964	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_1964	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1964	PWY-6728	methylaspartate cycle
Xaut_1964	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1964	PWY-7254	TCA cycle VII (acetate-producers)
Xaut_1964	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_1965	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_1965	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Xaut_1965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_1965	PWY-5690	TCA cycle II (plants and fungi)
Xaut_1965	PWY-6728	methylaspartate cycle
Xaut_1965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_1965	PWY-7254	TCA cycle VII (acetate-producers)
Xaut_1965	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_1970	PWY-5741	ethylmalonyl-CoA pathway
Xaut_1970	PWY-5744	glyoxylate assimilation
Xaut_1970	PWY-6728	methylaspartate cycle
Xaut_1970	PWY-7854	Xaut_1970
Xaut_1998	PWY-5101	L-isoleucine biosynthesis II
Xaut_1998	PWY-5103	L-isoleucine biosynthesis III
Xaut_1998	PWY-5104	L-isoleucine biosynthesis IV
Xaut_1998	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_2010	PWY-3162	L-tryptophan degradation V (side chain pathway)
Xaut_2010	PWY-5057	L-valine degradation II
Xaut_2010	PWY-5076	L-leucine degradation III
Xaut_2010	PWY-5078	L-isoleucine degradation II
Xaut_2010	PWY-5079	L-phenylalanine degradation III
Xaut_2010	PWY-5082	L-methionine degradation III
Xaut_2010	PWY-5480	pyruvate fermentation to ethanol I
Xaut_2010	PWY-5486	pyruvate fermentation to ethanol II
Xaut_2010	PWY-5751	phenylethanol biosynthesis
Xaut_2010	PWY-6313	serotonin degradation
Xaut_2010	PWY-6333	acetaldehyde biosynthesis I
Xaut_2010	PWY-6342	noradrenaline and adrenaline degradation
Xaut_2010	PWY-6587	pyruvate fermentation to ethanol III
Xaut_2010	PWY-6802	salidroside biosynthesis
Xaut_2010	PWY-6871	3-methylbutanol biosynthesis
Xaut_2010	PWY-7013	L-1,2-propanediol degradation
Xaut_2010	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Xaut_2010	PWY-7118	chitin degradation to ethanol
Xaut_2010	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Xaut_2013	PWY-4983	L-citrulline-nitric oxide cycle
Xaut_2013	PWY-4984	urea cycle
Xaut_2013	PWY-5	canavanine biosynthesis
Xaut_2013	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_2013	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_2016	PWY-5839	menaquinol-7 biosynthesis
Xaut_2016	PWY-5844	menaquinol-9 biosynthesis
Xaut_2016	PWY-5849	menaquinol-6 biosynthesis
Xaut_2016	PWY-5890	menaquinol-10 biosynthesis
Xaut_2016	PWY-5891	menaquinol-11 biosynthesis
Xaut_2016	PWY-5892	menaquinol-12 biosynthesis
Xaut_2016	PWY-5895	menaquinol-13 biosynthesis
Xaut_2019	PWY-5386	methylglyoxal degradation I
Xaut_2038	PWY-6168	flavin biosynthesis III (fungi)
Xaut_2038	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Xaut_2038	PWY-7991	Xaut_2038
Xaut_2042	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_2042	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_2042	PWY-7560	methylerythritol phosphate pathway II
Xaut_2047	PWY-2722	trehalose degradation IV
Xaut_2047	PWY-2723	trehalose degradation V
Xaut_2047	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Xaut_2047	PWY-5661	GDP-glucose biosynthesis
Xaut_2047	PWY-621	sucrose degradation III (sucrose invertase)
Xaut_2047	PWY-7238	sucrose biosynthesis II
Xaut_2047	PWY-7385	1,3-propanediol biosynthesis (engineered)
Xaut_2056	PWY-3341	L-proline biosynthesis III
Xaut_2056	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Xaut_2058	PWY-3341	L-proline biosynthesis III
Xaut_2058	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Xaut_2059	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_2059	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Xaut_2059	PWY-7761	Xaut_2059
Xaut_2078	PWY-7980	Xaut_2078
Xaut_2080	PWY-7980	Xaut_2080
Xaut_2126	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Xaut_2126	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Xaut_2132	PWY-5451	acetone degradation I (to methylglyoxal)
Xaut_2132	PWY-6588	pyruvate fermentation to acetone
Xaut_2132	PWY-6876	isopropanol biosynthesis
Xaut_2132	PWY-7466	acetone degradation III (to propane-1,2-diol)
Xaut_2157	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_2157	PWY-5109	2-methylbutanoate biosynthesis
Xaut_2157	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_2157	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_2157	PWY-5177	glutaryl-CoA degradation
Xaut_2157	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_2157	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_2157	PWY-6583	pyruvate fermentation to butanol I
Xaut_2157	PWY-6863	pyruvate fermentation to hexanol
Xaut_2157	PWY-6883	pyruvate fermentation to butanol II
Xaut_2157	PWY-6944	androstenedione degradation
Xaut_2157	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_2157	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_2157	PWY-7007	methyl ketone biosynthesis
Xaut_2157	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_2157	PWY-7094	fatty acid salvage
Xaut_2157	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_2157	PWY-735	jasmonic acid biosynthesis
Xaut_2157	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_2157	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_2157	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_2157	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_2157	PWY-7726	Xaut_2157
Xaut_2157	PWY-7778	Xaut_2157
Xaut_2157	PWY-7779	Xaut_2157
Xaut_2193	PWY-5642	2,4-dinitrotoluene degradation
Xaut_2206	PWY-7884	Xaut_2206
Xaut_2214	PWY-2941	L-lysine biosynthesis II
Xaut_2214	PWY-2942	L-lysine biosynthesis III
Xaut_2214	PWY-5097	L-lysine biosynthesis VI
Xaut_2214	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_2214	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Xaut_2214	PWY-6559	spermidine biosynthesis II
Xaut_2214	PWY-6562	norspermidine biosynthesis
Xaut_2214	PWY-7153	grixazone biosynthesis
Xaut_2214	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_2214	PWY-7977	Xaut_2214
Xaut_2223	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Xaut_2223	PWY-7806	Xaut_2223
Xaut_2225	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_2225	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_2226	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Xaut_2226	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Xaut_2226	PWY-6897	thiamin salvage II
Xaut_2226	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Xaut_2226	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Xaut_2226	PWY-7356	thiamin salvage IV (yeast)
Xaut_2226	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Xaut_2287	PWY-3961	phosphopantothenate biosynthesis II
Xaut_2310	PWY-2622	trehalose biosynthesis IV
Xaut_2310	PWY-7900	Xaut_2310
Xaut_2323	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_2323	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_2323	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_2324	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_2324	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Xaut_2328	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Xaut_2328	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Xaut_2328	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_2328	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_2328	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Xaut_2328	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Xaut_2328	PWY-7205	CMP phosphorylation
Xaut_2328	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Xaut_2328	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_2328	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_2328	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_2328	PWY-7224	purine deoxyribonucleosides salvage
Xaut_2328	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_2328	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Xaut_2336	PWY-381	nitrate reduction II (assimilatory)
Xaut_2336	PWY-5675	nitrate reduction V (assimilatory)
Xaut_2336	PWY-6549	L-glutamine biosynthesis III
Xaut_2336	PWY-6963	ammonia assimilation cycle I
Xaut_2336	PWY-6964	ammonia assimilation cycle II
Xaut_2340	PWY-5155	&beta;-alanine biosynthesis III
Xaut_2345	PWY-5269	cardiolipin biosynthesis II
Xaut_2345	PWY-5668	cardiolipin biosynthesis I
Xaut_2345	PWY-7817	Xaut_2345
Xaut_2347	PWY-6823	molybdenum cofactor biosynthesis
Xaut_2347	PWY-7887	Xaut_2347
Xaut_2355	PWY-7560	methylerythritol phosphate pathway II
Xaut_2356	PWY-702	L-methionine biosynthesis II
Xaut_2365	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_2370	PWY-1042	glycolysis IV (plant cytosol)
Xaut_2370	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Xaut_2370	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_2370	PWY-5723	Rubisco shunt
Xaut_2370	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_2370	PWY-6886	1-butanol autotrophic biosynthesis
Xaut_2370	PWY-6901	superpathway of glucose and xylose degradation
Xaut_2370	PWY-7003	glycerol degradation to butanol
Xaut_2370	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Xaut_2370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_2375	PWY-5194	siroheme biosynthesis
Xaut_2375	PWY-5196	factor 430 biosynthesis
Xaut_2375	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Xaut_2384	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_2398	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Xaut_2398	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Xaut_2398	PWY-7717	Xaut_2398
Xaut_2398	PWY-7733	Xaut_2398
Xaut_2398	PWY-7734	Xaut_2398
Xaut_2398	PWY-7765	Xaut_2398
Xaut_2400	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_2400	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_2400	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_2400	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Xaut_2403	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_2443	PWY-7942	Xaut_2443
Xaut_2445	PWY-5874	heme degradation
Xaut_2457	PWY-6012	acyl carrier protein metabolism I
Xaut_2457	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Xaut_2457	PWY-6289	petrobactin biosynthesis
Xaut_2464	PWY-5108	L-isoleucine biosynthesis V
Xaut_2464	PWY-5132	humulone biosynthesis
Xaut_2464	PWY-5133	cohumulone biosynthesis
Xaut_2464	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Xaut_2464	PWY-7118	chitin degradation to ethanol
Xaut_2464	PWY-7857	Xaut_2464
Xaut_2478	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Xaut_2478	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Xaut_2489	PWY-7942	Xaut_2489
Xaut_2492	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Xaut_2492	PWY-6148	tetrahydromethanopterin biosynthesis
Xaut_2492	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Xaut_2492	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Xaut_2492	PWY-7852	Xaut_2492
Xaut_2492	PWY-7853	Xaut_2492
Xaut_2496	PWY-7805	Xaut_2496
Xaut_2496	PWY-7807	Xaut_2496
Xaut_2499	PWY-6683	sulfate reduction III (assimilatory)
Xaut_2511	PWY-6829	tRNA methylation (yeast)
Xaut_2511	PWY-7285	methylwyosine biosynthesis
Xaut_2511	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Xaut_2538	PWY-3341	L-proline biosynthesis III
Xaut_2538	PWY-4981	L-proline biosynthesis II (from arginine)
Xaut_2538	PWY-6344	L-ornithine degradation II (Stickland reaction)
Xaut_2556	PWY-5057	L-valine degradation II
Xaut_2556	PWY-5076	L-leucine degradation III
Xaut_2556	PWY-5078	L-isoleucine degradation II
Xaut_2556	PWY-5101	L-isoleucine biosynthesis II
Xaut_2556	PWY-5103	L-isoleucine biosynthesis III
Xaut_2556	PWY-5104	L-isoleucine biosynthesis IV
Xaut_2556	PWY-5108	L-isoleucine biosynthesis V
Xaut_2556	PWY-7767	Xaut_2556
Xaut_2566	PWY-6749	CMP-legionaminate biosynthesis I
Xaut_2570	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_2570	PWY-6416	quinate degradation II
Xaut_2570	PWY-6707	gallate biosynthesis
Xaut_2582	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_2584	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_2589	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Xaut_2606	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Xaut_2614	PWY-5350	thiosulfate disproportionation III (rhodanese)
Xaut_2614	PWY-7927	Xaut_2614
Xaut_2625	PWY-2941	L-lysine biosynthesis II
Xaut_2625	PWY-2942	L-lysine biosynthesis III
Xaut_2625	PWY-5097	L-lysine biosynthesis VI
Xaut_2625	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Xaut_2625	PWY-6559	spermidine biosynthesis II
Xaut_2625	PWY-6562	norspermidine biosynthesis
Xaut_2625	PWY-7153	grixazone biosynthesis
Xaut_2625	PWY-7977	Xaut_2625
Xaut_2627	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_2627	PWY-7761	Xaut_2627
Xaut_2629	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Xaut_2630	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Xaut_2638	PWY-6167	flavin biosynthesis II (archaea)
Xaut_2669	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_2669	PWY-5392	reductive TCA cycle II
Xaut_2669	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_2669	PWY-5690	TCA cycle II (plants and fungi)
Xaut_2669	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_2669	PWY-6728	methylaspartate cycle
Xaut_2669	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_2669	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_2669	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Xaut_2688	PWY-6041	4-sulfocatechol degradation
Xaut_2689	PWY-6041	4-sulfocatechol degradation
Xaut_2703	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_2711	PWY-5941	glycogen degradation II (eukaryotic)
Xaut_2711	PWY-6724	starch degradation II
Xaut_2711	PWY-6737	starch degradation V
Xaut_2711	PWY-7238	sucrose biosynthesis II
Xaut_2750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_2750	PWY-5686	UMP biosynthesis
Xaut_2750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_2750	PWY-7790	Xaut_2750
Xaut_2750	PWY-7791	Xaut_2750
Xaut_2808	PWY-4261	glycerol degradation I
Xaut_2808	PWY-6118	glycerol-3-phosphate shuttle
Xaut_2808	PWY-6952	glycerophosphodiester degradation
Xaut_2809	PWY-4261	glycerol degradation I
Xaut_2810	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Xaut_2831	PWY-2201	folate transformations I
Xaut_2831	PWY-3841	folate transformations II
Xaut_2832	PWY-2201	folate transformations I
Xaut_2832	PWY-3841	folate transformations II
Xaut_2832	PWY-7977	Xaut_2832
Xaut_2843	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Xaut_2843	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Xaut_2863	PWY-7511	protein ubiquitylation
Xaut_2919	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Xaut_2921	PWY-4381	fatty acid biosynthesis initiation I
Xaut_2922	PWY-6854	ethylene biosynthesis III (microbes)
Xaut_2924	PWY-5532	adenosine nucleotides degradation IV
Xaut_2924	PWY-5723	Rubisco shunt
Xaut_2954	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Xaut_2957	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_2957	PWY-6692	Fe(II) oxidation
Xaut_2957	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Xaut_2957	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_3044	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_3044	PWY-4521	arsenite oxidation I (respiratory)
Xaut_3044	PWY-6692	Fe(II) oxidation
Xaut_3044	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_3053	PWY-7799	Xaut_3053
Xaut_3053	PWY-7800	Xaut_3053
Xaut_3055	PWY-2301	<i>myo</i>-inositol biosynthesis
Xaut_3055	PWY-4702	phytate degradation I
Xaut_3055	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Xaut_3074	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_3074	PWY-5723	Rubisco shunt
Xaut_3074	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_3074	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_3074	PWY-6901	superpathway of glucose and xylose degradation
Xaut_3074	PWY-7560	methylerythritol phosphate pathway II
Xaut_3075	PWY-1042	glycolysis IV (plant cytosol)
Xaut_3075	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3075	PWY-6901	superpathway of glucose and xylose degradation
Xaut_3075	PWY-7003	glycerol degradation to butanol
Xaut_3076	PWY-1042	glycolysis IV (plant cytosol)
Xaut_3076	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3076	PWY-6886	1-butanol autotrophic biosynthesis
Xaut_3076	PWY-6901	superpathway of glucose and xylose degradation
Xaut_3076	PWY-7003	glycerol degradation to butanol
Xaut_3077	PWY-1042	glycolysis IV (plant cytosol)
Xaut_3077	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_3077	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3077	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_3077	PWY-7385	1,3-propanediol biosynthesis (engineered)
Xaut_3078	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Xaut_3078	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Xaut_3078	PWY-6897	thiamin salvage II
Xaut_3078	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Xaut_3078	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Xaut_3078	PWY-7356	thiamin salvage IV (yeast)
Xaut_3078	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Xaut_3086	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Xaut_3086	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Xaut_3086	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Xaut_3086	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Xaut_3086	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Xaut_3086	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Xaut_3086	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Xaut_3086	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Xaut_3086	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Xaut_3086	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Xaut_3107	PWY-5676	acetyl-CoA fermentation to butanoate II
Xaut_3107	PWY-5741	ethylmalonyl-CoA pathway
Xaut_3107	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_3107	PWY-7948	Xaut_3107
Xaut_3115	PWY-5367	petroselinate biosynthesis
Xaut_3115	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_3115	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_3115	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_3115	PWY-5994	palmitate biosynthesis I (animals and fungi)
Xaut_3115	PWY-6113	superpathway of mycolate biosynthesis
Xaut_3115	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_3115	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_3115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Xaut_3115	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_3115	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_3115	PWY-7858	Xaut_3115
Xaut_3115	PWYG-321	mycolate biosynthesis
Xaut_3116	PWY-4381	fatty acid biosynthesis initiation I
Xaut_3116	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Xaut_3116	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Xaut_3123	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Xaut_3123	PWY-6596	adenosine nucleotides degradation I
Xaut_3123	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_3130	PWY-5269	cardiolipin biosynthesis II
Xaut_3130	PWY-5668	cardiolipin biosynthesis I
Xaut_3130	PWY-7817	Xaut_3130
Xaut_3131	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_3131	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_3131	PWY-7953	Xaut_3131
Xaut_3136	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_3143	PWY-1281	sulfoacetaldehyde degradation I
Xaut_3143	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Xaut_3143	PWY-5482	pyruvate fermentation to acetate II
Xaut_3143	PWY-5485	pyruvate fermentation to acetate IV
Xaut_3143	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3143	PWY-6637	sulfolactate degradation II
Xaut_3143	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Xaut_3190	PWY-6703	preQ<sub>0</sub> biosynthesis
Xaut_3208	PWY-6936	seleno-amino acid biosynthesis
Xaut_3208	PWY-7274	D-cycloserine biosynthesis
Xaut_3208	PWY-7870	Xaut_3208
Xaut_3219	PWY-181	photorespiration
Xaut_3221	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Xaut_3221	PWY-5723	Rubisco shunt
Xaut_3224	PWY-4081	glutathione redox reactions I
Xaut_3227	PWY-6164	3-dehydroquinate biosynthesis I
Xaut_3243	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_3248	PWY-5642	2,4-dinitrotoluene degradation
Xaut_3251	PWY-1281	sulfoacetaldehyde degradation I
Xaut_3251	PWY-5482	pyruvate fermentation to acetate II
Xaut_3251	PWY-5485	pyruvate fermentation to acetate IV
Xaut_3251	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3251	PWY-6637	sulfolactate degradation II
Xaut_3252	PWY-5482	pyruvate fermentation to acetate II
Xaut_3252	PWY-5485	pyruvate fermentation to acetate IV
Xaut_3252	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3256	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_3256	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_3256	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_3256	PWY-6113	superpathway of mycolate biosynthesis
Xaut_3256	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_3256	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_3256	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_3256	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_3256	PWY-7858	Xaut_3256
Xaut_3256	PWYG-321	mycolate biosynthesis
Xaut_3260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_3260	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_3260	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_3260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_3277	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Xaut_3278	PWY-5194	siroheme biosynthesis
Xaut_3278	PWY-5196	factor 430 biosynthesis
Xaut_3278	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Xaut_3280	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Xaut_3285	PWY-6683	sulfate reduction III (assimilatory)
Xaut_3290	PWY-5691	urate degradation to allantoin I
Xaut_3290	PWY-7394	urate degradation to allantoin II
Xaut_3290	PWY-7849	Xaut_3290
Xaut_3291	PWY-5691	urate degradation to allantoin I
Xaut_3291	PWY-7394	urate degradation to allantoin II
Xaut_3291	PWY-7849	Xaut_3291
Xaut_3319	PWY-6854	ethylene biosynthesis III (microbes)
Xaut_3321	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Xaut_3321	PWY-6269	adenosylcobalamin salvage from cobinamide II
Xaut_3321	PWY-7964	Xaut_3321
Xaut_3321	PWY-7965	Xaut_3321
Xaut_3321	PWY-7966	Xaut_3321
Xaut_3321	PWY-7967	Xaut_3321
Xaut_3321	PWY-7968	Xaut_3321
Xaut_3321	PWY-7969	Xaut_3321
Xaut_3321	PWY-7970	Xaut_3321
Xaut_3371	PWY-6486	D-galacturonate degradation II
Xaut_3371	PWY-6497	D-galactarate degradation II
Xaut_3371	PWY-6499	D-glucarate degradation II
Xaut_3371	PWY-6501	D-glucuronate degradation II
Xaut_3375	PWY-5694	allantoin degradation to glyoxylate I
Xaut_3375	PWY-5705	allantoin degradation to glyoxylate III
Xaut_3383	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
Xaut_3449	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Xaut_3449	PWY-6853	ethylene biosynthesis II (microbes)
Xaut_3449	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Xaut_3475	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Xaut_3479	PWY-1881	formate oxidation to CO<sub>2</sub>
Xaut_3479	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3479	PWY-6696	oxalate degradation III
Xaut_3479	PWY-7985	Xaut_3479
Xaut_3492	PWY-40	putrescine biosynthesis I
Xaut_3492	PWY-6305	putrescine biosynthesis IV
Xaut_3496	PWY-7801	Xaut_3496
Xaut_3500	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_3500	PWY-6416	quinate degradation II
Xaut_3500	PWY-6707	gallate biosynthesis
Xaut_3514	PWY-3841	folate transformations II
Xaut_3514	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_3514	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_3514	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Xaut_3514	PWY-7199	pyrimidine deoxyribonucleosides salvage
Xaut_3514	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Xaut_3515	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Xaut_3520	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3528	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3529	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Xaut_3529	PWY-6148	tetrahydromethanopterin biosynthesis
Xaut_3529	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Xaut_3529	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Xaut_3530	PWY-5254	methanofuran biosynthesis
Xaut_3533	PWY-5796	malonate decarboxylase activation
Xaut_3535	PWY-6148	tetrahydromethanopterin biosynthesis
Xaut_3550	PWY-5659	GDP-mannose biosynthesis
Xaut_3550	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Xaut_3551	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Xaut_3551	PWY-7820	Xaut_3551
Xaut_3554	PWY-3221	dTDP-L-rhamnose biosynthesis II
Xaut_3554	PWY-6808	dTDP-D-forosamine biosynthesis
Xaut_3554	PWY-6942	dTDP-D-desosamine biosynthesis
Xaut_3554	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Xaut_3554	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Xaut_3554	PWY-6974	dTDP-L-olivose biosynthesis
Xaut_3554	PWY-6976	dTDP-L-mycarose biosynthesis
Xaut_3554	PWY-7104	dTDP-L-megosamine biosynthesis
Xaut_3554	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Xaut_3554	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Xaut_3554	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Xaut_3554	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Xaut_3554	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Xaut_3554	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Xaut_3554	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Xaut_3554	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Xaut_3554	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Xaut_3554	PWY-7688	Xaut_3554
Xaut_3554	PWY-7814	Xaut_3554
Xaut_3556	PWY-3221	dTDP-L-rhamnose biosynthesis II
Xaut_3556	PWY-6808	dTDP-D-forosamine biosynthesis
Xaut_3556	PWY-6942	dTDP-D-desosamine biosynthesis
Xaut_3556	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Xaut_3556	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Xaut_3556	PWY-6974	dTDP-L-olivose biosynthesis
Xaut_3556	PWY-6976	dTDP-L-mycarose biosynthesis
Xaut_3556	PWY-7104	dTDP-L-megosamine biosynthesis
Xaut_3556	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Xaut_3556	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Xaut_3556	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Xaut_3556	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Xaut_3556	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Xaut_3556	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Xaut_3556	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Xaut_3556	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Xaut_3556	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Xaut_3556	PWY-7688	Xaut_3556
Xaut_3556	PWY-7814	Xaut_3556
Xaut_3564	PWY-6936	seleno-amino acid biosynthesis
Xaut_3564	PWY-7274	D-cycloserine biosynthesis
Xaut_3564	PWY-7870	Xaut_3564
Xaut_3570	PWY-6936	seleno-amino acid biosynthesis
Xaut_3570	PWY-7274	D-cycloserine biosynthesis
Xaut_3570	PWY-7870	Xaut_3570
Xaut_3582	PWY-5958	acridone alkaloid biosynthesis
Xaut_3582	PWY-6543	4-aminobenzoate biosynthesis
Xaut_3582	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Xaut_3582	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Xaut_3585	PWY-381	nitrate reduction II (assimilatory)
Xaut_3585	PWY-5675	nitrate reduction V (assimilatory)
Xaut_3585	PWY-6549	L-glutamine biosynthesis III
Xaut_3585	PWY-6963	ammonia assimilation cycle I
Xaut_3585	PWY-6964	ammonia assimilation cycle II
Xaut_3587	PWY-6938	NADH repair
Xaut_3658	PWY-6855	chitin degradation I (archaea)
Xaut_3658	PWY-6902	chitin degradation II
Xaut_3658	PWY-7822	Xaut_3658
Xaut_3698	PWY-5344	L-homocysteine biosynthesis
Xaut_3759	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3759	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Xaut_3759	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Xaut_3759	PWY-6596	adenosine nucleotides degradation I
Xaut_3759	PWY-6606	guanosine nucleotides degradation II
Xaut_3759	PWY-6607	guanosine nucleotides degradation I
Xaut_3759	PWY-6608	guanosine nucleotides degradation III
Xaut_3759	PWY-6999	theophylline degradation
Xaut_3760	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_3760	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Xaut_3760	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Xaut_3760	PWY-6596	adenosine nucleotides degradation I
Xaut_3760	PWY-6606	guanosine nucleotides degradation II
Xaut_3760	PWY-6607	guanosine nucleotides degradation I
Xaut_3760	PWY-6608	guanosine nucleotides degradation III
Xaut_3760	PWY-6999	theophylline degradation
Xaut_3776	PWY-6269	adenosylcobalamin salvage from cobinamide II
Xaut_3776	PWY-7962	Xaut_3776
Xaut_3776	PWY-7971	Xaut_3776
Xaut_3776	PWY-7972	Xaut_3776
Xaut_3787	PWY-7851	Xaut_3787
Xaut_3829	PWY-2941	L-lysine biosynthesis II
Xaut_3829	PWY-2942	L-lysine biosynthesis III
Xaut_3829	PWY-5097	L-lysine biosynthesis VI
Xaut_3847	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Xaut_3847	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Xaut_3849	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_3849	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_3849	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_3849	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_3879	PWY-6012	acyl carrier protein metabolism I
Xaut_3879	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Xaut_3879	PWY-6289	petrobactin biosynthesis
Xaut_3894	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Xaut_3894	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Xaut_3897	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Xaut_3897	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Xaut_3919	PWY-5686	UMP biosynthesis
Xaut_3919	PWY-7790	Xaut_3919
Xaut_3919	PWY-7791	Xaut_3919
Xaut_3926	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_3949	PWY-7429	arsenite oxidation II (respiratory)
Xaut_3950	PWY-7429	arsenite oxidation II (respiratory)
Xaut_3960	PWY-1042	glycolysis IV (plant cytosol)
Xaut_3960	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_3960	PWY-6901	superpathway of glucose and xylose degradation
Xaut_3960	PWY-7003	glycerol degradation to butanol
Xaut_3966	PWY-4202	arsenate detoxification I (glutaredoxin)
Xaut_3966	PWY-4621	arsenate detoxification II (glutaredoxin)
Xaut_3971	PWY-6523	nitrite-dependent anaerobic methane oxidation
Xaut_3971	PWY-6748	nitrate reduction VII (denitrification)
Xaut_3971	PWY-7084	nitrifier denitrification
Xaut_4057	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_4064	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Xaut_4064	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Xaut_4064	PWY-7717	Xaut_4064
Xaut_4064	PWY-7733	Xaut_4064
Xaut_4064	PWY-7734	Xaut_4064
Xaut_4064	PWY-7765	Xaut_4064
Xaut_4065	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_4072	PWY-723	alkylnitronates degradation
Xaut_4082	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Xaut_4082	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Xaut_4086	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Xaut_4086	PWY-2201	folate transformations I
Xaut_4086	PWY-3841	folate transformations II
Xaut_4086	PWY-5030	L-histidine degradation III
Xaut_4086	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_4086	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Xaut_4086	PWY-7909	Xaut_4086
Xaut_4090	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_4090	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_4090	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_4091	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_4091	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_4091	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_4092	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Xaut_4092	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Xaut_4092	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Xaut_4093	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_4093	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_4093	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_4098	PWY-5254	methanofuran biosynthesis
Xaut_4105	PWY-6840	homoglutathione biosynthesis
Xaut_4105	PWY-7255	ergothioneine biosynthesis I (bacteria)
Xaut_4121	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_4134	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Xaut_4134	PWY-6174	mevalonate pathway II (archaea)
Xaut_4134	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Xaut_4134	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Xaut_4134	PWY-7102	bisabolene biosynthesis
Xaut_4134	PWY-7391	isoprene biosynthesis II (engineered)
Xaut_4134	PWY-7524	mevalonate pathway III (archaea)
Xaut_4134	PWY-7560	methylerythritol phosphate pathway II
Xaut_4134	PWY-922	mevalonate pathway I
Xaut_4136	PWY-6167	flavin biosynthesis II (archaea)
Xaut_4136	PWY-6168	flavin biosynthesis III (fungi)
Xaut_4136	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Xaut_4136	PWY-7991	Xaut_4136
Xaut_4138	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Xaut_4143	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_4143	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_4143	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_4143	PWY-6113	superpathway of mycolate biosynthesis
Xaut_4143	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_4143	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_4143	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_4143	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_4143	PWY-7858	Xaut_4143
Xaut_4143	PWYG-321	mycolate biosynthesis
Xaut_4148	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Xaut_4148	PWY-5743	3-hydroxypropanoate cycle
Xaut_4148	PWY-5744	glyoxylate assimilation
Xaut_4148	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_4148	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_4148	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Xaut_4148	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Xaut_4155	PWY-5704	urea degradation II
Xaut_4156	PWY-5704	urea degradation II
Xaut_4172	PWY-5386	methylglyoxal degradation I
Xaut_4197	PWY-7805	Xaut_4197
Xaut_4197	PWY-7807	Xaut_4197
Xaut_4200	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Xaut_4200	PWY-7177	UTP and CTP dephosphorylation II
Xaut_4200	PWY-7185	UTP and CTP dephosphorylation I
Xaut_4203	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Xaut_4203	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Xaut_4204	PWY-6840	homoglutathione biosynthesis
Xaut_4204	PWY-7255	ergothioneine biosynthesis I (bacteria)
Xaut_4239	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Xaut_4252	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_4252	PWY-7118	chitin degradation to ethanol
Xaut_4252	PWY-7294	xylose degradation IV
Xaut_4252	PWY-7295	L-arabinose degradation IV
Xaut_4252	PWY-7854	Xaut_4252
Xaut_4260	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Xaut_4260	PWY-6269	adenosylcobalamin salvage from cobinamide II
Xaut_4260	PWY-7961	Xaut_4260
Xaut_4260	PWY-7963	Xaut_4260
Xaut_4260	PWY-7964	Xaut_4260
Xaut_4260	PWY-7965	Xaut_4260
Xaut_4260	PWY-7966	Xaut_4260
Xaut_4260	PWY-7967	Xaut_4260
Xaut_4260	PWY-7968	Xaut_4260
Xaut_4260	PWY-7969	Xaut_4260
Xaut_4260	PWY-7970	Xaut_4260
Xaut_4260	PWY-7975	Xaut_4260
Xaut_4270	PWY-6700	queuosine biosynthesis
Xaut_4271	PWY-6700	queuosine biosynthesis
Xaut_4276	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_4276	PWY-181	photorespiration
Xaut_4276	PWY-2161	folate polyglutamylation
Xaut_4276	PWY-2201	folate transformations I
Xaut_4276	PWY-3661	glycine betaine degradation I
Xaut_4276	PWY-3661-1	glycine betaine degradation II (mammalian)
Xaut_4276	PWY-3841	folate transformations II
Xaut_4276	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_4278	PWY-7991	Xaut_4278
Xaut_4279	PWY-6167	flavin biosynthesis II (archaea)
Xaut_4279	PWY-6168	flavin biosynthesis III (fungi)
Xaut_4279	PWY-7980	Xaut_4279
Xaut_4280	PWY-6167	flavin biosynthesis II (archaea)
Xaut_4280	PWY-6168	flavin biosynthesis III (fungi)
Xaut_4282	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Xaut_4282	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Xaut_4282	PWY-6896	thiamin salvage I
Xaut_4282	PWY-6897	thiamin salvage II
Xaut_4288	PWY-6700	queuosine biosynthesis
Xaut_4289	PWY-1042	glycolysis IV (plant cytosol)
Xaut_4289	PWY-1622	formaldehyde assimilation I (serine pathway)
Xaut_4289	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Xaut_4289	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_4289	PWY-5723	Rubisco shunt
Xaut_4289	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_4289	PWY-6886	1-butanol autotrophic biosynthesis
Xaut_4289	PWY-6901	superpathway of glucose and xylose degradation
Xaut_4289	PWY-7003	glycerol degradation to butanol
Xaut_4289	PWY-7124	ethylene biosynthesis V (engineered)
Xaut_4289	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Xaut_4290	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_4290	PWY-5109	2-methylbutanoate biosynthesis
Xaut_4290	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_4290	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_4290	PWY-5177	glutaryl-CoA degradation
Xaut_4290	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_4290	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_4290	PWY-6583	pyruvate fermentation to butanol I
Xaut_4290	PWY-6863	pyruvate fermentation to hexanol
Xaut_4290	PWY-6883	pyruvate fermentation to butanol II
Xaut_4290	PWY-6944	androstenedione degradation
Xaut_4290	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_4290	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_4290	PWY-7007	methyl ketone biosynthesis
Xaut_4290	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_4290	PWY-7094	fatty acid salvage
Xaut_4290	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_4290	PWY-735	jasmonic acid biosynthesis
Xaut_4290	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_4290	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_4290	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_4290	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_4290	PWY-7726	Xaut_4290
Xaut_4290	PWY-7778	Xaut_4290
Xaut_4290	PWY-7779	Xaut_4290
Xaut_4292	PWY-7802	Xaut_4292
Xaut_4295	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_4295	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Xaut_4319	PWY-2722	trehalose degradation IV
Xaut_4319	PWY-2723	trehalose degradation V
Xaut_4319	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Xaut_4319	PWY-5661	GDP-glucose biosynthesis
Xaut_4319	PWY-621	sucrose degradation III (sucrose invertase)
Xaut_4319	PWY-7238	sucrose biosynthesis II
Xaut_4319	PWY-7385	1,3-propanediol biosynthesis (engineered)
Xaut_4324	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_4324	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_4325	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Xaut_4325	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_4325	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_4325	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Xaut_4325	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Xaut_4325	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Xaut_4369	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_4372	PWY-6823	molybdenum cofactor biosynthesis
Xaut_4373	PWY-6823	molybdenum cofactor biosynthesis
Xaut_4377	PWY-5958	acridone alkaloid biosynthesis
Xaut_4377	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Xaut_4377	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Xaut_4378	PWY-5958	acridone alkaloid biosynthesis
Xaut_4378	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Xaut_4378	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Xaut_4380	PWY-1042	glycolysis IV (plant cytosol)
Xaut_4380	PWY-5484	glycolysis II (from fructose 6-phosphate)
Xaut_4380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Xaut_4380	PWY-7003	glycerol degradation to butanol
Xaut_4385	PWY-4381	fatty acid biosynthesis initiation I
Xaut_4402	PWY-7560	methylerythritol phosphate pathway II
Xaut_4403	PWY-5381	pyridine nucleotide cycling (plants)
Xaut_4403	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Xaut_4403	PWY-6596	adenosine nucleotides degradation I
Xaut_4403	PWY-6606	guanosine nucleotides degradation II
Xaut_4403	PWY-6607	guanosine nucleotides degradation I
Xaut_4403	PWY-6608	guanosine nucleotides degradation III
Xaut_4403	PWY-7185	UTP and CTP dephosphorylation I
Xaut_4403	PWY-7821	Xaut_4403
Xaut_4404	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Xaut_4418	PWY-6749	CMP-legionaminate biosynthesis I
Xaut_4419	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Xaut_4424	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Xaut_4424	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
Xaut_4429	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Xaut_4429	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Xaut_4429	PWY-5989	stearate biosynthesis II (bacteria and plants)
Xaut_4429	PWY-5994	palmitate biosynthesis I (animals and fungi)
Xaut_4429	PWY-6113	superpathway of mycolate biosynthesis
Xaut_4429	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Xaut_4429	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Xaut_4429	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Xaut_4429	PWY-7663	gondoate biosynthesis (anaerobic)
Xaut_4429	PWY-7664	oleate biosynthesis IV (anaerobic)
Xaut_4429	PWY-7858	Xaut_4429
Xaut_4429	PWYG-321	mycolate biosynthesis
Xaut_4433	PWY-7560	methylerythritol phosphate pathway II
Xaut_4434	PWY-5667	CDP-diacylglycerol biosynthesis I
Xaut_4434	PWY-5981	CDP-diacylglycerol biosynthesis III
Xaut_4434	PWY-7817	Xaut_4434
Xaut_4444	PWY-1361	benzoyl-CoA degradation I (aerobic)
Xaut_4444	PWY-5109	2-methylbutanoate biosynthesis
Xaut_4444	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Xaut_4444	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Xaut_4444	PWY-5177	glutaryl-CoA degradation
Xaut_4444	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_4444	PWY-6435	4-hydroxybenzoate biosynthesis V
Xaut_4444	PWY-6583	pyruvate fermentation to butanol I
Xaut_4444	PWY-6863	pyruvate fermentation to hexanol
Xaut_4444	PWY-6883	pyruvate fermentation to butanol II
Xaut_4444	PWY-6944	androstenedione degradation
Xaut_4444	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Xaut_4444	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Xaut_4444	PWY-7007	methyl ketone biosynthesis
Xaut_4444	PWY-7046	4-coumarate degradation (anaerobic)
Xaut_4444	PWY-7094	fatty acid salvage
Xaut_4444	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Xaut_4444	PWY-735	jasmonic acid biosynthesis
Xaut_4444	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Xaut_4444	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Xaut_4444	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Xaut_4444	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Xaut_4444	PWY-7726	Xaut_4444
Xaut_4444	PWY-7778	Xaut_4444
Xaut_4444	PWY-7779	Xaut_4444
Xaut_4453	PWY-6910	hydroxymethylpyrimidine salvage
Xaut_4453	PWY-7356	thiamin salvage IV (yeast)
Xaut_4453	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Xaut_4466	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Xaut_4470	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Xaut_4473	PWY-7883	Xaut_4473
Xaut_4534	PWY-7158	L-phenylalanine degradation V
Xaut_4562	PWY-7255	ergothioneine biosynthesis I (bacteria)
Xaut_4562	PWY-7550	ergothioneine biosynthesis II (fungi)
Xaut_4563	PWY-7255	ergothioneine biosynthesis I (bacteria)
Xaut_4565	PWY-723	alkylnitronates degradation
Xaut_4569	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_4569	PWY-6549	L-glutamine biosynthesis III
Xaut_4569	PWY-6728	methylaspartate cycle
Xaut_4569	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_4569	PWY-7124	ethylene biosynthesis V (engineered)
Xaut_4569	PWY-7254	TCA cycle VII (acetate-producers)
Xaut_4569	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Xaut_4617	PWY-5741	ethylmalonyl-CoA pathway
Xaut_4617	PWY-5743	3-hydroxypropanoate cycle
Xaut_4617	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_4617	PWY-6728	methylaspartate cycle
Xaut_4617	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_4617	PWY-7854	Xaut_4617
Xaut_4619	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Xaut_4619	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Xaut_4621	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_4621	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Xaut_4621	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Xaut_4621	PWY-6692	Fe(II) oxidation
Xaut_4622	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_4622	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Xaut_4622	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Xaut_4622	PWY-6692	Fe(II) oxidation
Xaut_4647	PWY-3781	aerobic respiration I (cytochrome c)
Xaut_4647	PWY-4521	arsenite oxidation I (respiratory)
Xaut_4647	PWY-6692	Fe(II) oxidation
Xaut_4647	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Xaut_4656	PWY-5169	cyanurate degradation
Xaut_4656	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_4661	PWY-5669	phosphatidylethanolamine biosynthesis I
Xaut_4662	PWY-5669	phosphatidylethanolamine biosynthesis I
Xaut_4669	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Xaut_4669	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Xaut_4669	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Xaut_4669	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Xaut_4674	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Xaut_4674	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_4674	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Xaut_4674	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Xaut_4674	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_4674	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Xaut_4674	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Xaut_4674	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Xaut_4678	PWY-5350	thiosulfate disproportionation III (rhodanese)
Xaut_4678	PWY-7927	Xaut_4678
Xaut_4679	PWY-3821	galactose degradation III
Xaut_4679	PWY-6317	galactose degradation I (Leloir pathway)
Xaut_4679	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Xaut_4679	PWY-6527	stachyose degradation
Xaut_4679	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Xaut_4679	PWY-7344	UDP-D-galactose biosynthesis
Xaut_4698	PWY-381	nitrate reduction II (assimilatory)
Xaut_4698	PWY-5675	nitrate reduction V (assimilatory)
Xaut_4698	PWY-6549	L-glutamine biosynthesis III
Xaut_4698	PWY-6963	ammonia assimilation cycle I
Xaut_4698	PWY-6964	ammonia assimilation cycle II
Xaut_4700	PWY-3661	glycine betaine degradation I
Xaut_4700	PWY-4722	creatinine degradation II
Xaut_4701	PWY-3661	glycine betaine degradation I
Xaut_4701	PWY-4722	creatinine degradation II
Xaut_4702	PWY-3661	glycine betaine degradation I
Xaut_4702	PWY-4722	creatinine degradation II
Xaut_4703	PWY-3661	glycine betaine degradation I
Xaut_4703	PWY-4722	creatinine degradation II
Xaut_4704	PWY-2201	folate transformations I
Xaut_4704	PWY-5497	purine nucleobases degradation II (anaerobic)
Xaut_4704	PWY-7909	Xaut_4704
Xaut_4705	PWY-5169	cyanurate degradation
Xaut_4705	PWY-5703	urea degradation I
Xaut_4705	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Xaut_4715	PWY-5101	L-isoleucine biosynthesis II
Xaut_4715	PWY-6871	3-methylbutanol biosynthesis
Xaut_4722	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Xaut_4725	PWY-4381	fatty acid biosynthesis initiation I
Xaut_4725	PWY-5743	3-hydroxypropanoate cycle
Xaut_4725	PWY-5744	glyoxylate assimilation
Xaut_4725	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Xaut_4725	PWY-6722	candicidin biosynthesis
Xaut_4733	PWY-6891	thiazole biosynthesis II (Bacillus)
Xaut_4733	PWY-6892	thiazole biosynthesis I (E. coli)
Xaut_4733	PWY-7560	methylerythritol phosphate pathway II
Xaut_4751	PWY-7805	Xaut_4751
Xaut_4751	PWY-7807	Xaut_4751
Xaut_4756	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_4756	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_4777	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_4865	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Xaut_4865	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Xaut_4865	PWY-6936	seleno-amino acid biosynthesis
Xaut_4865	PWY-702	L-methionine biosynthesis II
Xaut_4873	PWY-4983	L-citrulline-nitric oxide cycle
Xaut_4873	PWY-4984	urea cycle
Xaut_4873	PWY-5	canavanine biosynthesis
Xaut_4873	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_4873	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_4874	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_4874	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_4874	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_4874	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_4887	PWY-6825	phosphatidylcholine biosynthesis V
Xaut_5025	PWY-5443	aminopropanol phosphate biosynthesis I
Xaut_5032	PWY-723	alkylnitronates degradation
Xaut_5033	PWY-723	alkylnitronates degradation
Xaut_5047	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Xaut_5047	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Xaut_5047	PWY-6936	seleno-amino acid biosynthesis
Xaut_5047	PWY-702	L-methionine biosynthesis II
Xaut_5053	PWY-4983	L-citrulline-nitric oxide cycle
Xaut_5053	PWY-4984	urea cycle
Xaut_5053	PWY-5	canavanine biosynthesis
Xaut_5053	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_5053	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Xaut_5054	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_5054	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_5054	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_5054	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_5066	PWY-5392	reductive TCA cycle II
Xaut_5066	PWY-5537	pyruvate fermentation to acetate V
Xaut_5066	PWY-5538	pyruvate fermentation to acetate VI
Xaut_5066	PWY-5690	TCA cycle II (plants and fungi)
Xaut_5066	PWY-5913	TCA cycle VI (obligate autotrophs)
Xaut_5066	PWY-6728	methylaspartate cycle
Xaut_5066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Xaut_5066	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Xaut_5067	PWY-6123	inosine-5'-phosphate biosynthesis I
Xaut_5067	PWY-6124	inosine-5'-phosphate biosynthesis II
Xaut_5067	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Xaut_5067	PWY-7234	inosine-5'-phosphate biosynthesis III
Xaut_5068	PWY-4983	L-citrulline-nitric oxide cycle
Xaut_5068	PWY-4984	urea cycle
Xaut_5068	PWY-5	canavanine biosynthesis
Xaut_5068	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Xaut_5068	PWY-7400	L-arginine biosynthesis IV (archaebacteria)