locus-tag class description L1B16_00015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1B16_00015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1B16_00050 PF00534 Glycosyl transferases group 1 L1B16_00050 PF00535 Glycosyl transferase family 2 L1B16_00055 PF02049 Flagellar hook-basal body complex protein FliE L1B16_00060 PF01514 Secretory protein of YscJ/FliF family L1B16_00060 PF08345 Flagellar M-ring protein C-terminal L1B16_00065 PF01706 FliG C-terminal domain L1B16_00065 PF14841 FliG middle domain L1B16_00065 PF14842 FliG N-terminal domain L1B16_00075 PF18269 T3SS EscN ATPase C-terminal domain L1B16_00075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1B16_00095 PF02154 Flagellar motor switch protein FliM L1B16_00095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L1B16_00100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L1B16_00105 PF04347 Flagellar biosynthesis protein, FliO L1B16_00110 PF00813 FliP family L1B16_00115 PF01313 Bacterial export proteins, family 3 L1B16_00120 PF01311 Bacterial export proteins, family 1 L1B16_00125 PF13188 PAS domain L1B16_00125 PF03707 Bacterial signalling protein N terminal repeat L1B16_00125 PF00990 Diguanylate cyclase, GGDEF domain L1B16_00125 PF00563 EAL domain L1B16_00130 PF00990 Diguanylate cyclase, GGDEF domain L1B16_00135 PF00990 Diguanylate cyclase, GGDEF domain L1B16_00135 PF00563 EAL domain L1B16_00135 PF03707 Bacterial signalling protein N terminal repeat L1B16_00140 PF01312 FlhB HrpN YscU SpaS Family L1B16_00145 PF00771 FHIPEP family L1B16_00150 PF00448 SRP54-type protein, GTPase domain L1B16_00155 PF10609 NUBPL iron-transfer P-loop NTPase L1B16_00160 PF04545 Sigma-70, region 4 L1B16_00160 PF04539 Sigma-70 region 3 L1B16_00160 PF04542 Sigma-70 region 2 L1B16_00165 PF00072 Response regulator receiver domain L1B16_00170 PF04344 Chemotaxis phosphatase, CheZ L1B16_00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_00175 PF01584 CheW-like domain L1B16_00175 PF01627 Hpt domain L1B16_00175 PF00072 Response regulator receiver domain L1B16_00175 PF02895 Signal transducing histidine kinase, homodimeric domain L1B16_00230 PF01618 MotA/TolQ/ExbB proton channel family L1B16_00235 PF00691 OmpA family L1B16_00235 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1B16_00240 PF13614 AAA domain L1B16_00245 PF01584 CheW-like domain L1B16_00255 PF00072 Response regulator receiver domain L1B16_00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_00260 PF01584 CheW-like domain L1B16_00260 PF02895 Signal transducing histidine kinase, homodimeric domain L1B16_00260 PF01627 Hpt domain L1B16_00260 PF09078 CheY binding L1B16_00265 PF02203 Tar ligand binding domain homologue L1B16_00265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00265 PF00672 HAMP domain L1B16_00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00275 PF17200 Single Cache domain 2 L1B16_00275 PF00672 HAMP domain L1B16_00280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00280 PF02203 Tar ligand binding domain homologue L1B16_00280 PF00672 HAMP domain L1B16_00290 PF00672 HAMP domain L1B16_00290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00290 PF02203 Tar ligand binding domain homologue L1B16_00295 PF02203 Tar ligand binding domain homologue L1B16_00295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00295 PF00672 HAMP domain L1B16_00300 PF00672 HAMP domain L1B16_00300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00300 PF02203 Tar ligand binding domain homologue L1B16_00305 PF00672 HAMP domain L1B16_00305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00305 PF02203 Tar ligand binding domain homologue L1B16_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00310 PF00672 HAMP domain L1B16_00310 PF02203 Tar ligand binding domain homologue L1B16_00315 PF00672 HAMP domain L1B16_00315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00330 PF07317 Flagellar regulator YcgR L1B16_00330 PF07238 PilZ domain L1B16_00335 PF01584 CheW-like domain L1B16_00345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_00345 PF00672 HAMP domain L1B16_00345 PF02203 Tar ligand binding domain homologue L1B16_00350 PF01739 CheR methyltransferase, SAM binding domain L1B16_00350 PF03705 CheR methyltransferase, all-alpha domain L1B16_00355 PF03975 CheD chemotactic sensory transduction L1B16_00360 PF00072 Response regulator receiver domain L1B16_00360 PF01339 CheB methylesterase L1B16_00365 PF00563 EAL domain L1B16_00365 PF03707 Bacterial signalling protein N terminal repeat L1B16_00365 PF00990 Diguanylate cyclase, GGDEF domain L1B16_00370 PF00561 alpha/beta hydrolase fold L1B16_00375 PF00330 Aconitase family (aconitate hydratase) L1B16_00375 PF11791 Aconitate B N-terminal domain L1B16_00375 PF06434 Aconitate hydratase 2 N-terminus L1B16_00390 PF00694 Aconitase C-terminal domain L1B16_00390 PF00330 Aconitase family (aconitate hydratase) L1B16_00400 PF00501 AMP-binding enzyme L1B16_00400 PF13193 AMP-binding enzyme C-terminal domain L1B16_00405 PF00378 Enoyl-CoA hydratase/isomerase L1B16_00410 PF00512 His Kinase A (phospho-acceptor) domain L1B16_00410 PF01627 Hpt domain L1B16_00410 PF00072 Response regulator receiver domain L1B16_00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_00415 PF00072 Response regulator receiver domain L1B16_00420 PF01336 OB-fold nucleic acid binding domain L1B16_00420 PF00152 tRNA synthetases class II (D, K and N) L1B16_00430 PF04397 LytTr DNA-binding domain L1B16_00430 PF00072 Response regulator receiver domain L1B16_00445 PF01368 DHH family L1B16_00445 PF02272 DHHA1 domain L1B16_00445 PF17768 RecJ OB domain L1B16_00455 PF01272 Transcription elongation factor, GreA/GreB, C-term L1B16_00455 PF03449 Transcription elongation factor, N-terminal L1B16_00460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1B16_00460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L1B16_00460 PF02142 MGS-like domain L1B16_00470 PF00117 Glutamine amidotransferase class-I L1B16_00470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L1B16_00475 PF05173 Dihydrodipicolinate reductase, C-terminus L1B16_00475 PF01113 Dihydrodipicolinate reductase, N-terminus L1B16_00480 PF03475 3-alpha domain L1B16_00480 PF03473 MOSC domain L1B16_00485 PF00155 Aminotransferase class I and II L1B16_00500 PF07664 Ferrous iron transport protein B C terminus L1B16_00500 PF02421 Ferrous iron transport protein B L1B16_00500 PF07670 Nucleoside recognition L1B16_00510 PF00378 Enoyl-CoA hydratase/isomerase L1B16_00515 PF00682 HMGL-like L1B16_00520 PF00106 short chain dehydrogenase L1B16_00525 PF09285 Elongation factor P, C-terminal L1B16_00525 PF01132 Elongation factor P (EF-P) OB domain L1B16_00525 PF08207 Elongation factor P (EF-P) KOW-like domain L1B16_00545 PF01565 FAD binding domain L1B16_00545 PF02913 FAD linked oxidases, C-terminal domain L1B16_00550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1B16_00550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1B16_00560 PF13520 Amino acid permease L1B16_00565 PF13520 Amino acid permease L1B16_00570 PF00596 Class II Aldolase and Adducin N-terminal domain L1B16_00575 PF03079 ARD/ARD' family L1B16_00595 PF01502 Phosphoribosyl-AMP cyclohydrolase L1B16_00595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L1B16_00600 PF00977 Histidine biosynthesis protein L1B16_00605 PF00977 Histidine biosynthesis protein L1B16_00610 PF00117 Glutamine amidotransferase class-I L1B16_00615 PF00475 Imidazoleglycerol-phosphate dehydratase L1B16_00620 PF00155 Aminotransferase class I and II L1B16_00625 PF00815 Histidinol dehydrogenase L1B16_00630 PF01634 ATP phosphoribosyltransferase L1B16_00630 PF08029 HisG, C-terminal domain L1B16_00640 PF03129 Anticodon binding domain L1B16_00640 PF13393 Histidyl-tRNA synthetase L1B16_00645 PF00027 Cyclic nucleotide-binding domain L1B16_00645 PF13545 Crp-like helix-turn-helix domain L1B16_00655 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_00655 PF14821 Threonine synthase N terminus L1B16_00665 PF08544 GHMP kinases C terminal L1B16_00665 PF00288 GHMP kinases N terminal domain L1B16_00670 PF13840 ACT domain L1B16_00670 PF00742 Homoserine dehydrogenase L1B16_00670 PF01842 ACT domain L1B16_00670 PF03447 Homoserine dehydrogenase, NAD binding domain L1B16_00670 PF00696 Amino acid kinase family L1B16_00700 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain L1B16_00700 PF13018 Extended Signal Peptide of Type V secretion system L1B16_00700 PF05594 Haemagluttinin repeat L1B16_00700 PF13332 Hemagglutinin repeat L1B16_00700 PF05860 haemagglutination activity domain L1B16_00700 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain L1B16_00700 PF13018 Extended Signal Peptide of Type V secretion system L1B16_00700 PF05594 Haemagluttinin repeat L1B16_00700 PF13332 Hemagglutinin repeat L1B16_00700 PF05860 haemagglutination activity domain L1B16_00705 PF08479 POTRA domain, ShlB-type L1B16_00705 PF17287 POTRA domain L1B16_00705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB L1B16_00715 PF01522 Polysaccharide deacetylase L1B16_00715 PF14883 Hypothetical glycosyl hydrolase family 13 L1B16_00720 PF00535 Glycosyl transferase family 2 L1B16_00745 PF13086 AAA domain L1B16_00745 PF13195 Protein of unknown function (DUF4011) L1B16_00745 PF13087 AAA domain L1B16_00745 PF13195 Protein of unknown function (DUF4011) L1B16_00745 PF13087 AAA domain L1B16_00745 PF13086 AAA domain L1B16_00775 PF02534 Type IV secretory system Conjugative DNA transfer L1B16_00810 PF00069 Protein kinase domain L1B16_00810 PF03793 PASTA domain L1B16_00880 PF00171 Aldehyde dehydrogenase family L1B16_00895 PF01180 Dihydroorotate dehydrogenase L1B16_00900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L1B16_00900 PF01565 FAD binding domain L1B16_00920 PF01569 PAP2 superfamily L1B16_00925 PF04551 GcpE protein L1B16_00935 PF00072 Response regulator receiver domain L1B16_00940 PF02013 Cellulose or protein binding domain L1B16_00940 PF00150 Cellulase (glycosyl hydrolase family 5) L1B16_00945 PF00563 EAL domain L1B16_00945 PF01590 GAF domain L1B16_00945 PF00990 Diguanylate cyclase, GGDEF domain L1B16_00945 PF00360 Phytochrome region L1B16_00950 PF00474 Sodium:solute symporter family L1B16_00955 PF14310 Fibronectin type III-like domain L1B16_00955 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_00955 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_00975 PF00342 Phosphoglucose isomerase L1B16_00980 PF02261 Aspartate decarboxylase L1B16_00985 PF02569 Pantoate-beta-alanine ligase L1B16_00990 PF02548 Ketopantoate hydroxymethyltransferase L1B16_00995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1B16_01000 PF01743 Poly A polymerase head domain L1B16_01000 PF12626 Polymerase A arginine-rich C-terminus L1B16_01000 PF12627 Probable RNA and SrmB- binding site of polymerase A L1B16_01010 PF02649 Type I GTP cyclohydrolase folE2 L1B16_01015 PF01520 N-acetylmuramoyl-L-alanine amidase L1B16_01030 PF00083 Sugar (and other) transporter L1B16_01040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L1B16_01040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L1B16_01050 PF17137 Domain of unknown function (DUF5110) L1B16_01050 PF16338 Domain of unknown function (DUF4968) L1B16_01050 PF01055 Glycosyl hydrolases family 31 L1B16_01065 PF03442 Carbohydrate binding domain X2 L1B16_01065 PF00942 Cellulose binding domain L1B16_01080 PF03466 LysR substrate binding domain L1B16_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_01085 PF01081 KDPG and KHG aldolase L1B16_01090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L1B16_01090 PF13378 Enolase C-terminal domain-like L1B16_01095 PF08450 SMP-30/Gluconolactonase/LRE-like region L1B16_01100 PF05035 2-keto-3-deoxy-galactonokinase L1B16_01105 PF11953 Domain of unknown function (DUF3470) L1B16_01105 PF00037 4Fe-4S binding domain L1B16_01115 PF00701 Dihydrodipicolinate synthetase family L1B16_01130 PF00578 AhpC/TSA family L1B16_01135 PF02562 PhoH-like protein L1B16_01135 PF13638 PIN domain L1B16_01150 PF08543 Phosphomethylpyrimidine kinase L1B16_01150 PF02581 Thiamine monophosphate synthase L1B16_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_01175 PF03466 LysR substrate binding domain L1B16_01180 PF17954 Quercetinase C-terminal cupin domain L1B16_01180 PF02678 Pirin L1B16_01185 PF13006 Insertion element 4 transposase N-terminal L1B16_01185 PF13006 Insertion element 4 transposase N-terminal L1B16_01185 PF01609 Transposase DDE domain L1B16_01185 PF01609 Transposase DDE domain L1B16_01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_01190 PF08447 PAS fold L1B16_01190 PF13426 PAS domain L1B16_01200 PF02599 Global regulator protein family L1B16_01205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1B16_01205 PF02272 DHHA1 domain L1B16_01205 PF01411 tRNA synthetases class II (A) L1B16_01210 PF02631 RecX family L1B16_01215 PF00154 recA bacterial DNA recombination protein L1B16_01220 PF00717 Peptidase S24-like L1B16_01220 PF01726 LexA DNA binding domain L1B16_01225 PF03109 ABC1 family L1B16_01230 PF07715 TonB-dependent Receptor Plug Domain L1B16_01230 PF00593 TonB dependent receptor L1B16_01235 PF02464 Competence-damaged protein L1B16_01240 PF01926 50S ribosome-binding GTPase L1B16_01240 PF13167 GTP-binding GTPase N-terminal L1B16_01240 PF16360 GTP-binding GTPase Middle Region L1B16_01245 PF17209 Hfq protein L1B16_01255 PF00809 Pterin binding enzyme L1B16_01260 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_01260 PF17862 AAA+ lid domain L1B16_01260 PF06480 FtsH Extracellular L1B16_01260 PF01434 Peptidase family M41 L1B16_01265 PF01728 FtsJ-like methyltransferase L1B16_01270 PF01985 CRS1 / YhbY (CRM) domain L1B16_01280 PF01551 Peptidase family M23 L1B16_01280 PF01476 LysM domain L1B16_01285 PF09335 SNARE associated Golgi protein L1B16_01295 PF01975 Survival protein SurE L1B16_01300 PF01713 Smr domain L1B16_01305 PF01142 tRNA pseudouridine synthase D (TruD) L1B16_01310 PF02542 YgbB family L1B16_01315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L1B16_01320 PF04977 Septum formation initiator L1B16_01325 PF03952 Enolase, N-terminal domain L1B16_01325 PF00113 Enolase, C-terminal TIM barrel domain L1B16_01335 PF00793 DAHP synthetase I family L1B16_01340 PF00117 Glutamine amidotransferase class-I L1B16_01340 PF06418 CTP synthase N-terminus L1B16_01350 PF01751 Toprim domain L1B16_01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_01350 PF00986 DNA gyrase B subunit, carboxyl terminus L1B16_01350 PF00204 DNA gyrase B L1B16_01365 PF01384 Phosphate transporter family L1B16_01375 PF03471 Transporter associated domain L1B16_01375 PF01595 Cyclin M transmembrane N-terminal domain L1B16_01375 PF00571 CBS domain L1B16_01390 PF00296 Luciferase-like monooxygenase L1B16_01395 PF07690 Major Facilitator Superfamily L1B16_01400 PF00005 ABC transporter L1B16_01400 PF00664 ABC transporter transmembrane region L1B16_01405 PF00005 ABC transporter L1B16_01425 PF00534 Glycosyl transferases group 1 L1B16_01425 PF13579 Glycosyl transferase 4-like domain L1B16_01430 PF13439 Glycosyltransferase Family 4 L1B16_01430 PF00534 Glycosyl transferases group 1 L1B16_01460 PF00535 Glycosyl transferase family 2 L1B16_01465 PF01943 Polysaccharide biosynthesis protein L1B16_01470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L1B16_01490 PF05523 WxcM-like, C-terminal L1B16_01505 PF00034 Cytochrome c L1B16_01515 PF08281 Sigma-70, region 4 L1B16_01515 PF04542 Sigma-70 region 2 L1B16_01525 PF00082 Subtilase family L1B16_01530 PF01578 Cytochrome C assembly protein L1B16_01540 PF03100 CcmE L1B16_01545 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L1B16_01545 PF01578 Cytochrome C assembly protein L1B16_01550 PF08534 Redoxin L1B16_01555 PF03918 Cytochrome C biogenesis protein L1B16_01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_01565 PF00072 Response regulator receiver domain L1B16_01565 PF13426 PAS domain L1B16_01570 PF06745 KaiC L1B16_01575 PF13426 PAS domain L1B16_01575 PF00072 Response regulator receiver domain L1B16_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_01580 PF00512 His Kinase A (phospho-acceptor) domain L1B16_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_01580 PF08448 PAS fold L1B16_01580 PF13188 PAS domain L1B16_01580 PF00072 Response regulator receiver domain L1B16_01595 PF01494 FAD binding domain L1B16_01600 PF00672 HAMP domain L1B16_01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_01600 PF02203 Tar ligand binding domain homologue L1B16_01610 PF00155 Aminotransferase class I and II L1B16_01610 PF00392 Bacterial regulatory proteins, gntR family L1B16_01615 PF02627 Carboxymuconolactone decarboxylase family L1B16_01635 PF00672 HAMP domain L1B16_01635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_01635 PF02203 Tar ligand binding domain homologue L1B16_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_01660 PF03466 LysR substrate binding domain L1B16_01665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1B16_01665 PF02403 Seryl-tRNA synthetase N-terminal domain L1B16_01670 PF03544 Gram-negative bacterial TonB protein C-terminal L1B16_01680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L1B16_01685 PF01842 ACT domain L1B16_01685 PF01817 Chorismate mutase type II L1B16_01685 PF00800 Prephenate dehydratase L1B16_01690 PF00266 Aminotransferase class-V L1B16_01695 PF00174 Oxidoreductase molybdopterin binding domain L1B16_01700 PF01794 Ferric reductase like transmembrane component L1B16_01725 PF00392 Bacterial regulatory proteins, gntR family L1B16_01725 PF07702 UTRA domain L1B16_01735 PF07969 Amidohydrolase family L1B16_01740 PF00221 Aromatic amino acid lyase L1B16_01750 PF17392 Urocanase C-terminal domain L1B16_01750 PF17391 Urocanase N-terminal domain L1B16_01750 PF01175 Urocanase Rossmann-like domain L1B16_01765 PF13360 PQQ-like domain L1B16_01770 PF03989 DNA gyrase C-terminal domain, beta-propeller L1B16_01770 PF00521 DNA gyrase/topoisomerase IV, subunit A L1B16_01775 PF01008 Initiation factor 2 subunit family L1B16_01790 PF00152 tRNA synthetases class II (D, K and N) L1B16_01795 PF00533 BRCA1 C Terminus (BRCT) domain L1B16_01795 PF01653 NAD-dependent DNA ligase adenylation domain L1B16_01795 PF03120 NAD-dependent DNA ligase OB-fold domain L1B16_01795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L1B16_01795 PF12826 Helix-hairpin-helix motif L1B16_01800 PF00155 Aminotransferase class I and II L1B16_01810 PF04354 ZipA, C-terminal FtsZ-binding domain L1B16_01815 PF02463 RecF/RecN/SMC N terminal domain L1B16_01820 PF03948 Ribosomal protein L9, C-terminal domain L1B16_01820 PF01281 Ribosomal protein L9, N-terminal domain L1B16_01825 PF01084 Ribosomal protein S18 L1B16_01830 PF01250 Ribosomal protein S6 L1B16_01835 PF01521 Iron-sulphur cluster biosynthesis L1B16_01840 PF00152 tRNA synthetases class II (D, K and N) L1B16_01840 PF01336 OB-fold nucleic acid binding domain L1B16_01905 PF00484 Carbonic anhydrase L1B16_01910 PF06052 3-hydroxyanthranilic acid dioxygenase L1B16_01920 PF00266 Aminotransferase class-V L1B16_01925 PF01494 FAD binding domain L1B16_01930 PF08411 Exonuclease C-terminal L1B16_01930 PF00929 Exonuclease L1B16_01955 PF01513 ATP-NAD kinase L1B16_01960 PF10672 S-adenosylmethionine-dependent methyltransferase L1B16_01960 PF02926 THUMP domain L1B16_01960 PF01170 Putative RNA methylase family UPF0020 L1B16_01970 PF12848 ABC transporter L1B16_01970 PF16326 ABC transporter C-terminal domain L1B16_01970 PF00005 ABC transporter L1B16_02005 PF00581 Rhodanese-like domain L1B16_02010 PF00293 NUDIX domain L1B16_02015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1B16_02015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase L1B16_02020 PF00378 Enoyl-CoA hydratase/isomerase L1B16_02030 PF00633 Helix-hairpin-helix motif L1B16_02030 PF10576 Iron-sulfur binding domain of endonuclease III L1B16_02030 PF00730 HhH-GPD superfamily base excision DNA repair protein L1B16_02040 PF00484 Carbonic anhydrase L1B16_02055 PF12849 PBP superfamily domain L1B16_02060 PF12849 PBP superfamily domain L1B16_02065 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_02070 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_02075 PF00005 ABC transporter L1B16_02080 PF01895 PhoU domain L1B16_02090 PF00929 Exonuclease L1B16_02095 PF00990 Diguanylate cyclase, GGDEF domain L1B16_02105 PF00588 SpoU rRNA Methylase family L1B16_02105 PF08032 RNA 2'-O ribose methyltransferase substrate binding L1B16_02115 PF08206 Ribonuclease B OB domain L1B16_02115 PF00575 S1 RNA binding domain L1B16_02115 PF08461 Ribonuclease R winged-helix domain L1B16_02115 PF17876 Cold shock domain L1B16_02115 PF00773 RNB domain L1B16_02130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_02130 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_02130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_02135 PF01209 ubiE/COQ5 methyltransferase family L1B16_02140 PF02574 Homocysteine S-methyltransferase L1B16_02140 PF00809 Pterin binding enzyme L1B16_02145 PF02310 B12 binding domain L1B16_02145 PF02607 B12 binding domain L1B16_02145 PF02965 Vitamin B12 dependent methionine synthase, activation domain L1B16_02145 PF00809 Pterin binding enzyme L1B16_02145 PF02574 Homocysteine S-methyltransferase L1B16_02155 PF00294 pfkB family carbohydrate kinase L1B16_02160 PF07690 Major Facilitator Superfamily L1B16_02165 PF00356 Bacterial regulatory proteins, lacI family L1B16_02180 PF04102 SlyX L1B16_02185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L1B16_02185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L1B16_02185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L1B16_02190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase L1B16_02190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1B16_02195 PF00255 Glutathione peroxidase L1B16_02205 PF00392 Bacterial regulatory proteins, gntR family L1B16_02210 PF00005 ABC transporter L1B16_02235 PF00206 Lyase L1B16_02235 PF10415 Fumarase C C-terminus L1B16_02240 PF01595 Cyclin M transmembrane N-terminal domain L1B16_02240 PF03471 Transporter associated domain L1B16_02240 PF00571 CBS domain L1B16_02245 PF00206 Lyase L1B16_02245 PF08328 Adenylosuccinate lyase C-terminal L1B16_02255 PF08007 Cupin superfamily protein L1B16_02265 PF00676 Dehydrogenase E1 component L1B16_02265 PF16078 2-oxoglutarate dehydrogenase N-terminus L1B16_02265 PF02779 Transketolase, pyrimidine binding domain L1B16_02265 PF16870 2-oxoglutarate dehydrogenase C-terminal L1B16_02270 PF00364 Biotin-requiring enzyme L1B16_02270 PF02817 e3 binding domain L1B16_02270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1B16_02275 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_02275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1B16_02280 PF03641 Possible lysine decarboxylase L1B16_02295 PF02016 LD-carboxypeptidase N-terminal domain L1B16_02295 PF17676 LD-carboxypeptidase C-terminal domain L1B16_02305 PF00664 ABC transporter transmembrane region L1B16_02305 PF00005 ABC transporter L1B16_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_02310 PF03466 LysR substrate binding domain L1B16_02315 PF00664 ABC transporter transmembrane region L1B16_02315 PF00005 ABC transporter L1B16_02315 PF03412 Peptidase C39 family L1B16_02335 PF01817 Chorismate mutase type II L1B16_02335 PF02153 Prephenate dehydrogenase L1B16_02340 PF08543 Phosphomethylpyrimidine kinase L1B16_02345 PF00226 DnaJ domain L1B16_02345 PF01556 DnaJ C terminal domain L1B16_02345 PF00684 DnaJ central domain L1B16_02350 PF00012 Hsp70 protein L1B16_02355 PF01025 GrpE L1B16_02360 PF01628 HrcA protein C terminal domain L1B16_02360 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding L1B16_02365 PF02463 RecF/RecN/SMC N terminal domain L1B16_02370 PF01475 Ferric uptake regulator family L1B16_02375 PF04355 SmpA / OmlA family L1B16_02380 PF03658 RnfH family Ubiquitin L1B16_02390 PF01668 SmpB protein L1B16_02395 PF00082 Subtilase family L1B16_02490 PF01738 Dienelactone hydrolase family L1B16_02510 PF00692 dUTPase L1B16_02515 PF10609 NUBPL iron-transfer P-loop NTPase L1B16_02535 PF01431 Peptidase family M13 L1B16_02535 PF05649 Peptidase family M13 L1B16_02540 PF01431 Peptidase family M13 L1B16_02540 PF05649 Peptidase family M13 L1B16_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1B16_02570 PF01266 FAD dependent oxidoreductase L1B16_02575 PF04235 Protein of unknown function (DUF418) L1B16_02580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1B16_02585 PF00877 NlpC/P60 family L1B16_02590 PF00877 NlpC/P60 family L1B16_02600 PF13649 Methyltransferase domain L1B16_02605 PF00375 Sodium:dicarboxylate symporter family L1B16_02610 PF00245 Alkaline phosphatase L1B16_02615 PF01171 PP-loop family L1B16_02615 PF09179 TilS substrate binding domain L1B16_02615 PF11734 TilS substrate C-terminal domain L1B16_02620 PF02609 Exonuclease VII small subunit L1B16_02625 PF00348 Polyprenyl synthetase L1B16_02640 PF01523 Putative modulator of DNA gyrase L1B16_02645 PF04751 Protein of unknown function (DUF615) L1B16_02650 PF01523 Putative modulator of DNA gyrase L1B16_02660 PF13116 Protein of unknown function L1B16_02660 PF13502 AsmA-like C-terminal region L1B16_02665 PF10150 Ribonuclease E/G family L1B16_02665 PF00575 S1 RNA binding domain L1B16_02670 PF02545 Maf-like protein L1B16_02675 PF04402 Protein of unknown function (DUF541) L1B16_02685 PF02590 Predicted SPOUT methyltransferase L1B16_02705 PF01467 Cytidylyltransferase-like L1B16_02720 PF08264 Anticodon-binding domain of tRNA L1B16_02720 PF00133 tRNA synthetases class I (I, L, M and V) L1B16_02720 PF13603 Leucyl-tRNA synthetase, Domain 2 L1B16_02730 PF00085 Thioredoxin L1B16_02750 PF07043 Protein of unknown function (DUF1328) L1B16_02755 PF04070 Domain of unknown function (DUF378) L1B16_02770 PF03466 LysR substrate binding domain L1B16_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_02805 PF00999 Sodium/hydrogen exchanger family L1B16_02810 PF00144 Beta-lactamase L1B16_02815 PF03737 Aldolase/RraA L1B16_02830 PF00990 Diguanylate cyclase, GGDEF domain L1B16_02835 PF01479 S4 domain L1B16_02835 PF00849 RNA pseudouridylate synthase L1B16_02840 PF00990 Diguanylate cyclase, GGDEF domain L1B16_02840 PF00563 EAL domain L1B16_02840 PF08448 PAS fold L1B16_02845 PF03880 DbpA RNA binding domain L1B16_02845 PF00271 Helicase conserved C-terminal domain L1B16_02845 PF00270 DEAD/DEAH box helicase L1B16_02850 PF04545 Sigma-70, region 4 L1B16_02850 PF04539 Sigma-70 region 3 L1B16_02850 PF04542 Sigma-70 region 2 L1B16_02870 PF01494 FAD binding domain L1B16_02905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L1B16_02905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L1B16_02915 PF00654 Voltage gated chloride channel L1B16_02930 PF07715 TonB-dependent Receptor Plug Domain L1B16_02930 PF00593 TonB dependent receptor L1B16_02980 PF00248 Aldo/keto reductase family L1B16_02985 PF07690 Major Facilitator Superfamily L1B16_02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_02990 PF03466 LysR substrate binding domain L1B16_03000 PF12833 Helix-turn-helix domain L1B16_03000 PF06719 AraC-type transcriptional regulator N-terminus L1B16_03020 PF02321 Outer membrane efflux protein L1B16_03040 PF00529 HlyD membrane-fusion protein of T1SS L1B16_03040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_03050 PF01475 Ferric uptake regulator family L1B16_03055 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1B16_03065 PF00795 Carbon-nitrogen hydrolase L1B16_03080 PF06123 Inner membrane protein CreD L1B16_03100 PF00672 HAMP domain L1B16_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_03100 PF00512 His Kinase A (phospho-acceptor) domain L1B16_03105 PF00486 Transcriptional regulatory protein, C terminal L1B16_03105 PF00072 Response regulator receiver domain L1B16_03110 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ L1B16_03120 PF00271 Helicase conserved C-terminal domain L1B16_03120 PF03461 TRCF domain L1B16_03120 PF17757 UvrB interaction domain L1B16_03120 PF02559 CarD-like/TRCF domain L1B16_03120 PF00270 DEAD/DEAH box helicase L1B16_03130 PF01627 Hpt domain L1B16_03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_03130 PF01584 CheW-like domain L1B16_03130 PF09078 CheY binding L1B16_03130 PF02895 Signal transducing histidine kinase, homodimeric domain L1B16_03135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_03135 PF00672 HAMP domain L1B16_03140 PF01584 CheW-like domain L1B16_03145 PF00563 EAL domain L1B16_03145 PF00990 Diguanylate cyclase, GGDEF domain L1B16_03145 PF13426 PAS domain L1B16_03150 PF03705 CheR methyltransferase, all-alpha domain L1B16_03150 PF01739 CheR methyltransferase, SAM binding domain L1B16_03155 PF01339 CheB methylesterase L1B16_03155 PF00072 Response regulator receiver domain L1B16_03160 PF13091 PLD-like domain L1B16_03165 PF05649 Peptidase family M13 L1B16_03165 PF01431 Peptidase family M13 L1B16_03175 PF00300 Histidine phosphatase superfamily (branch 1) L1B16_03180 PF04493 Endonuclease V L1B16_03195 PF05726 Pirin C-terminal cupin domain L1B16_03195 PF02678 Pirin L1B16_03210 PF02678 Pirin L1B16_03210 PF05726 Pirin C-terminal cupin domain L1B16_03215 PF02554 Carbon starvation protein CstA L1B16_03215 PF13722 5TM C-terminal transporter carbon starvation CstA L1B16_03220 PF04328 Selenoprotein, putative L1B16_03225 PF13419 Haloacid dehalogenase-like hydrolase L1B16_03250 PF12804 MobA-like NTP transferase domain L1B16_03265 PF13478 XdhC Rossmann domain L1B16_03265 PF02625 XdhC and CoxI family L1B16_03270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L1B16_03270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L1B16_03275 PF00941 FAD binding domain in molybdopterin dehydrogenase L1B16_03275 PF03450 CO dehydrogenase flavoprotein C-terminal domain L1B16_03280 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_03280 PF10518 TAT (twin-arginine translocation) pathway signal sequence L1B16_03280 PF01799 [2Fe-2S] binding domain L1B16_03285 PF14765 Polyketide synthase dehydratase L1B16_03285 PF00550 Phosphopantetheine attachment site L1B16_03285 PF08659 KR domain L1B16_03285 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_03285 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_03285 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_03285 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_03285 PF00698 Acyl transferase domain L1B16_03285 PF00107 Zinc-binding dehydrogenase L1B16_03290 PF00360 Phytochrome region L1B16_03290 PF00563 EAL domain L1B16_03290 PF01590 GAF domain L1B16_03290 PF00990 Diguanylate cyclase, GGDEF domain L1B16_03295 PF00436 Single-strand binding protein family L1B16_03300 PF00348 Polyprenyl synthetase L1B16_03310 PF08245 Mur ligase middle domain L1B16_03325 PF01842 ACT domain L1B16_03325 PF00696 Amino acid kinase family L1B16_03330 PF02567 Phenazine biosynthesis-like protein L1B16_03335 PF02567 Phenazine biosynthesis-like protein L1B16_03345 PF02566 OsmC-like protein L1B16_03350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1B16_03350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1B16_03355 PF03652 Holliday junction resolvase L1B16_03360 PF02622 Uncharacterized ACR, COG1678 L1B16_03365 PF00117 Glutamine amidotransferase class-I L1B16_03365 PF00958 GMP synthase C terminal domain L1B16_03365 PF03352 Methyladenine glycosylase L1B16_03365 PF13673 Acetyltransferase (GNAT) domain L1B16_03365 PF13302 Acetyltransferase (GNAT) domain L1B16_03375 PF00437 Type II/IV secretion system protein L1B16_03380 PF00437 Type II/IV secretion system protein L1B16_03385 PF01168 Alanine racemase, N-terminal domain L1B16_03390 PF14748 Pyrroline-5-carboxylate reductase dimerisation L1B16_03390 PF03807 NADP oxidoreductase coenzyme F420-dependent L1B16_03400 PF01551 Peptidase family M23 L1B16_03400 PF01476 LysM domain L1B16_03420 PF01965 DJ-1/PfpI family L1B16_03430 PF02082 Transcriptional regulator L1B16_03435 PF01458 Uncharacterized protein family (UPF0051) L1B16_03440 PF00005 ABC transporter L1B16_03445 PF01458 Uncharacterized protein family (UPF0051) L1B16_03450 PF00266 Aminotransferase class-V L1B16_03460 PF00355 Rieske [2Fe-2S] domain L1B16_03465 PF07715 TonB-dependent Receptor Plug Domain L1B16_03465 PF00593 TonB dependent receptor L1B16_03470 PF18331 PKHD-type hydroxylase C-terminal domain L1B16_03470 PF13640 2OG-Fe(II) oxygenase superfamily L1B16_03495 PF02424 ApbE family L1B16_03500 PF00175 Oxidoreductase NAD-binding domain L1B16_03500 PF00258 Flavodoxin L1B16_03500 PF00667 FAD binding domain L1B16_03520 PF07687 Peptidase dimerisation domain L1B16_03520 PF01546 Peptidase family M20/M25/M40 L1B16_03530 PF01636 Phosphotransferase enzyme family L1B16_03535 PF00483 Nucleotidyl transferase L1B16_03540 PF00308 Bacterial dnaA protein L1B16_03545 PF01594 AI-2E family transporter L1B16_03555 PF02769 AIR synthase related protein, C-terminal domain L1B16_03555 PF00586 AIR synthase related protein, N-terminal domain L1B16_03565 PF00551 Formyl transferase L1B16_03585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L1B16_03590 PF01722 BolA-like protein L1B16_03595 PF01380 SIS domain L1B16_03595 PF00571 CBS domain L1B16_03610 PF03968 OstA-like protein L1B16_03615 PF00005 ABC transporter L1B16_03620 PF04963 Sigma-54 factor, core binding domain L1B16_03620 PF00309 Sigma-54 factor, Activator interacting domain (AID) L1B16_03620 PF04552 Sigma-54, DNA binding domain L1B16_03625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L1B16_03630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1B16_03635 PF07475 HPr Serine kinase C-terminal domain L1B16_03635 PF02603 HPr Serine kinase N terminus L1B16_03640 PF03668 P-loop ATPase protein family L1B16_03650 PF00381 PTS HPr component phosphorylation site L1B16_03655 PF00391 PEP-utilising enzyme, mobile domain L1B16_03655 PF02896 PEP-utilising enzyme, TIM barrel domain L1B16_03655 PF05524 PEP-utilising enzyme, N-terminal L1B16_03660 PF01769 Divalent cation transporter L1B16_03660 PF03448 MgtE intracellular N domain L1B16_03660 PF00571 CBS domain L1B16_03665 PF00756 Putative esterase L1B16_03670 PF02322 Cytochrome bd terminal oxidase subunit II L1B16_03675 PF01654 Cytochrome bd terminal oxidase subunit I L1B16_03690 PF00324 Amino acid permease L1B16_03695 PF00544 Pectate lyase L1B16_03700 PF00561 alpha/beta hydrolase fold L1B16_03705 PF00196 Bacterial regulatory proteins, luxR family L1B16_03710 PF00324 Amino acid permease L1B16_03730 PF12706 Beta-lactamase superfamily domain L1B16_03745 PF00376 MerR family regulatory protein L1B16_03745 PF09278 MerR, DNA binding L1B16_03750 PF07690 Major Facilitator Superfamily L1B16_03755 PF03738 Glutathionylspermidine synthase preATP-grasp L1B16_03780 PF04012 PspA/IM30 family L1B16_03790 PF00583 Acetyltransferase (GNAT) family L1B16_03795 PF01243 Pyridoxamine 5'-phosphate oxidase L1B16_03795 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L1B16_03800 PF01202 Shikimate kinase L1B16_03805 PF01761 3-dehydroquinate synthase L1B16_03815 PF01208 Uroporphyrinogen decarboxylase (URO-D) L1B16_03820 PF07690 Major Facilitator Superfamily L1B16_03825 PF17149 Periplasmic sensor domain found in signal transduction proteins L1B16_03825 PF00672 HAMP domain L1B16_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_03825 PF00512 His Kinase A (phospho-acceptor) domain L1B16_03825 PF01627 Hpt domain L1B16_03825 PF00072 Response regulator receiver domain L1B16_03830 PF00072 Response regulator receiver domain L1B16_03830 PF01627 Hpt domain L1B16_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_03830 PF00512 His Kinase A (phospho-acceptor) domain L1B16_03835 PF04264 YceI-like domain L1B16_03840 PF01292 Prokaryotic cytochrome b561 L1B16_03855 PF03313 Serine dehydratase alpha chain L1B16_03855 PF03315 Serine dehydratase beta chain L1B16_03865 PF00696 Amino acid kinase family L1B16_03865 PF00742 Homoserine dehydrogenase L1B16_03865 PF03447 Homoserine dehydrogenase, NAD binding domain L1B16_03870 PF01053 Cys/Met metabolism PLP-dependent enzyme L1B16_03875 PF00561 alpha/beta hydrolase fold L1B16_03880 PF01551 Peptidase family M23 L1B16_03885 PF00009 Elongation factor Tu GTP binding domain L1B16_03885 PF16658 Class II release factor RF3, C-terminal domain L1B16_03890 PF03006 Haemolysin-III related L1B16_03895 PF05170 AsmA family L1B16_03900 PF00571 CBS domain L1B16_03900 PF00478 IMP dehydrogenase / GMP reductase domain L1B16_03905 PF00535 Glycosyl transferase family 2 L1B16_03910 PF00912 Transglycosylase L1B16_03915 PF01430 Hsp33 protein L1B16_03925 PF07715 TonB-dependent Receptor Plug Domain L1B16_03925 PF00593 TonB dependent receptor L1B16_03930 PF00440 Bacterial regulatory proteins, tetR family L1B16_03940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_03940 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_03940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_03940 PF09317 Domain of unknown function (DUF1974) L1B16_03970 PF01597 Glycine cleavage H-protein L1B16_03975 PF01571 Aminomethyltransferase folate-binding domain L1B16_03975 PF08669 Glycine cleavage T-protein C-terminal barrel domain L1B16_03985 PF01145 SPFH domain / Band 7 family L1B16_03985 PF16200 C-terminal region of band_7 L1B16_03990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family L1B16_03995 PF03819 MazG nucleotide pyrophosphohydrolase domain L1B16_04000 PF00459 Inositol monophosphatase family L1B16_04005 PF00293 NUDIX domain L1B16_04010 PF00202 Aminotransferase class-III L1B16_04015 PF04452 RNA methyltransferase L1B16_04020 PF02685 Glucokinase L1B16_04035 PF00704 Glycosyl hydrolases family 18 L1B16_04035 PF01476 LysM domain L1B16_04040 PF07691 PA14 domain L1B16_04040 PF02838 Glycosyl hydrolase family 20, domain 2 L1B16_04040 PF00728 Glycosyl hydrolase family 20, catalytic domain L1B16_04050 PF07691 PA14 domain L1B16_04050 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_04050 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_04050 PF14310 Fibronectin type III-like domain L1B16_04060 PF01301 Glycosyl hydrolases family 35 L1B16_04065 PF13520 Amino acid permease L1B16_04075 PF02056 Family 4 glycosyl hydrolase L1B16_04075 PF11975 Family 4 glycosyl hydrolase C-terminal domain L1B16_04085 PF07971 Glycosyl hydrolase family 92 L1B16_04085 PF17678 Glycosyl hydrolase family 92 N-terminal domain L1B16_04090 PF01301 Glycosyl hydrolases family 35 L1B16_04120 PF12161 HsdM N-terminal domain L1B16_04120 PF02384 N-6 DNA Methylase L1B16_04145 PF18766 SWI2/SNF2 ATPase L1B16_04145 PF11867 Domain of unknown function (DUF3387) L1B16_04145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L1B16_04175 PF03932 CutC family L1B16_04180 PF01112 Asparaginase L1B16_04185 PF12034 Domain of unknown function (DUF3520) L1B16_04185 PF00092 von Willebrand factor type A domain L1B16_04185 PF12450 von Willebrand factor L1B16_04190 PF04542 Sigma-70 region 2 L1B16_04190 PF08281 Sigma-70, region 4 L1B16_04200 PF13302 Acetyltransferase (GNAT) domain L1B16_04215 PF00072 Response regulator receiver domain L1B16_04215 PF01584 CheW-like domain L1B16_04215 PF02895 Signal transducing histidine kinase, homodimeric domain L1B16_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_04215 PF01627 Hpt domain L1B16_04220 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term L1B16_04220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_04225 PF01584 CheW-like domain L1B16_04230 PF00072 Response regulator receiver domain L1B16_04235 PF00072 Response regulator receiver domain L1B16_04240 PF02951 Prokaryotic glutathione synthetase, N-terminal domain L1B16_04240 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain L1B16_04250 PF03747 ADP-ribosylglycohydrolase L1B16_04255 PF00814 Glycoprotease family L1B16_04260 PF13307 Helicase C-terminal domain L1B16_04260 PF04851 Type III restriction enzyme, res subunit L1B16_04270 PF14814 Bifunctional transglycosylase second domain L1B16_04270 PF00905 Penicillin binding protein transpeptidase domain L1B16_04270 PF00912 Transglycosylase L1B16_04275 PF00535 Glycosyl transferase family 2 L1B16_04285 PF02824 TGS domain L1B16_04285 PF04607 Region found in RelA / SpoT proteins L1B16_04285 PF13291 ACT domain L1B16_04290 PF08042 PqqA family L1B16_04295 PF12706 Beta-lactamase superfamily domain L1B16_04300 PF03070 TENA/THI-4/PQQC family L1B16_04305 PF05402 Coenzyme PQQ synthesis protein D (PqqD) L1B16_04310 PF04055 Radical SAM superfamily L1B16_04310 PF13186 Iron-sulfur cluster-binding domain L1B16_04325 PF02685 Glucokinase L1B16_04340 PF00271 Helicase conserved C-terminal domain L1B16_04340 PF00270 DEAD/DEAH box helicase L1B16_04340 PF11898 Domain of unknown function (DUF3418) L1B16_04340 PF04408 Helicase associated domain (HA2) L1B16_04340 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold L1B16_04345 PF00210 Ferritin-like domain L1B16_04350 PF00270 DEAD/DEAH box helicase L1B16_04350 PF00570 HRDC domain L1B16_04350 PF09382 RQC domain L1B16_04350 PF00271 Helicase conserved C-terminal domain L1B16_04350 PF16124 RecQ zinc-binding L1B16_04370 PF00849 RNA pseudouridylate synthase L1B16_04370 PF01479 S4 domain L1B16_04380 PF00672 HAMP domain L1B16_04380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_04380 PF02203 Tar ligand binding domain homologue L1B16_04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_04395 PF03466 LysR substrate binding domain L1B16_04400 PF06508 Queuosine biosynthesis protein QueC L1B16_04420 PF00248 Aldo/keto reductase family L1B16_04425 PF04055 Radical SAM superfamily L1B16_04435 PF00691 OmpA family L1B16_04440 PF07676 WD40-like Beta Propeller Repeat L1B16_04440 PF04052 TolB amino-terminal domain L1B16_04450 PF02472 Biopolymer transport protein ExbD/TolR L1B16_04455 PF01618 MotA/TolQ/ExbB proton channel family L1B16_04460 PF03061 Thioesterase superfamily L1B16_04465 PF17864 RuvB AAA lid domain L1B16_04465 PF05496 Holliday junction DNA helicase RuvB P-loop domain L1B16_04465 PF05491 RuvB C-terminal winged helix domain L1B16_04470 PF02705 K+ potassium transporter L1B16_04480 PF01330 RuvA N terminal domain L1B16_04480 PF07499 RuvA, C-terminal domain L1B16_04485 PF02075 Crossover junction endodeoxyribonuclease RuvC L1B16_04490 PF01709 Transcriptional regulator L1B16_04505 PF02938 GAD domain L1B16_04505 PF01336 OB-fold nucleic acid binding domain L1B16_04505 PF00152 tRNA synthetases class II (D, K and N) L1B16_04520 PF07690 Major Facilitator Superfamily L1B16_04530 PF05506 Domain of unknown function (DUF756) L1B16_04530 PF04185 Phosphoesterase family L1B16_04555 PF12848 ABC transporter L1B16_04555 PF00005 ABC transporter L1B16_04560 PF00593 TonB dependent receptor L1B16_04560 PF07715 TonB-dependent Receptor Plug Domain L1B16_04570 PF07715 TonB-dependent Receptor Plug Domain L1B16_04570 PF00593 TonB dependent receptor L1B16_04575 PF07715 TonB-dependent Receptor Plug Domain L1B16_04575 PF00593 TonB dependent receptor L1B16_04580 PF00067 Cytochrome P450 L1B16_04620 PF07660 Secretin and TonB N terminus short domain L1B16_04620 PF00593 TonB dependent receptor L1B16_04620 PF07715 TonB-dependent Receptor Plug Domain L1B16_04630 PF04183 IucA / IucC family L1B16_04630 PF06276 Ferric iron reductase FhuF-like transporter L1B16_04635 PF07690 Major Facilitator Superfamily L1B16_04640 PF06276 Ferric iron reductase FhuF-like transporter L1B16_04640 PF04183 IucA / IucC family L1B16_04645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L1B16_04645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L1B16_04670 PF07715 TonB-dependent Receptor Plug Domain L1B16_04670 PF00593 TonB dependent receptor L1B16_04680 PF10431 C-terminal, D2-small domain, of ClpB protein L1B16_04680 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_04680 PF07724 AAA domain (Cdc48 subfamily) L1B16_04680 PF17871 AAA lid domain L1B16_04680 PF02861 Clp amino terminal domain, pathogenicity island component L1B16_04685 PF00005 ABC transporter L1B16_04690 PF00005 ABC transporter L1B16_04695 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_04700 PF09084 NMT1/THI5 like L1B16_04705 PF00248 Aldo/keto reductase family L1B16_04710 PF00296 Luciferase-like monooxygenase L1B16_04715 PF00593 TonB dependent receptor L1B16_04715 PF07715 TonB-dependent Receptor Plug Domain L1B16_04720 PF01541 GIY-YIG catalytic domain L1B16_04755 PF00593 TonB dependent receptor L1B16_04755 PF07715 TonB-dependent Receptor Plug Domain L1B16_04760 PF02358 Trehalose-phosphatase L1B16_04765 PF00723 Glycosyl hydrolases family 15 L1B16_04770 PF00982 Glycosyltransferase family 20 L1B16_04775 PF01011 PQQ enzyme repeat L1B16_04780 PF02203 Tar ligand binding domain homologue L1B16_04780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_04780 PF00672 HAMP domain L1B16_04790 PF02578 Multi-copper polyphenol oxidoreductase laccase L1B16_04795 PF00849 RNA pseudouridylate synthase L1B16_04800 PF13525 Outer membrane lipoprotein L1B16_04810 PF02540 NAD synthase L1B16_04810 PF00795 Carbon-nitrogen hydrolase L1B16_04815 PF00549 CoA-ligase L1B16_04815 PF02629 CoA binding domain L1B16_04820 PF08442 ATP-grasp domain L1B16_04820 PF00549 CoA-ligase L1B16_04825 PF00512 His Kinase A (phospho-acceptor) domain L1B16_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_04830 PF02954 Bacterial regulatory protein, Fis family L1B16_04830 PF00158 Sigma-54 interaction domain L1B16_04830 PF00072 Response regulator receiver domain L1B16_04835 PF00437 Type II/IV secretion system protein L1B16_04835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L1B16_04840 PF00114 Pilin (bacterial filament) L1B16_04840 PF07963 Prokaryotic N-terminal methylation motif L1B16_04845 PF00482 Type II secretion system (T2SS), protein F L1B16_04850 PF06750 Bacterial Peptidase A24 N-terminal domain L1B16_04850 PF01478 Type IV leader peptidase family L1B16_04855 PF01121 Dephospho-CoA kinase L1B16_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_04865 PF00512 His Kinase A (phospho-acceptor) domain L1B16_04865 PF00989 PAS fold L1B16_04865 PF11808 Phosphate regulon sensor protein PhoR L1B16_04870 PF00072 Response regulator receiver domain L1B16_04870 PF00486 Transcriptional regulatory protein, C terminal L1B16_04880 PF08443 RimK-like ATP-grasp domain L1B16_04880 PF18030 RimK PreATP-grasp domain L1B16_04885 PF00128 Alpha amylase, catalytic domain L1B16_04885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1B16_04950 PF01131 DNA topoisomerase L1B16_04950 PF01751 Toprim domain L1B16_04955 PF00145 C-5 cytosine-specific DNA methylase L1B16_04995 PF06067 Domain of unknown function (DUF932) L1B16_05130 PF18495 Antitoxin VbhA L1B16_05180 PF08448 PAS fold L1B16_05180 PF00563 EAL domain L1B16_05180 PF00990 Diguanylate cyclase, GGDEF domain L1B16_05180 PF08447 PAS fold L1B16_05220 PF05598 Transposase domain (DUF772) L1B16_05265 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1B16_05330 PF03466 LysR substrate binding domain L1B16_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_05335 PF01381 Helix-turn-helix L1B16_05355 PF00589 Phage integrase family L1B16_05355 PF14659 Phage integrase, N-terminal SAM-like domain L1B16_05355 PF13356 Arm DNA-binding domain L1B16_05365 PF00657 GDSL-like Lipase/Acylhydrolase L1B16_05365 PF03797 Autotransporter beta-domain L1B16_05375 PF05690 Thiazole biosynthesis protein ThiG L1B16_05380 PF02390 Putative methyltransferase L1B16_05385 PF02080 TrkA-C domain L1B16_05385 PF03600 Citrate transporter L1B16_05400 PF01557 Fumarylacetoacetate (FAA) hydrolase family L1B16_05405 PF01741 Large-conductance mechanosensitive channel, MscL L1B16_05415 PF00356 Bacterial regulatory proteins, lacI family L1B16_05430 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation L1B16_05430 PF14508 Glycosyl-hydrolase 97 N-terminal L1B16_05430 PF10566 Glycoside hydrolase 97 L1B16_05440 PF00135 Carboxylesterase family L1B16_05445 PF00588 SpoU rRNA Methylase family L1B16_05445 PF08032 RNA 2'-O ribose methyltransferase substrate binding L1B16_05460 PF11838 ERAP1-like C-terminal domain L1B16_05460 PF01433 Peptidase family M1 domain L1B16_05470 PF00873 AcrB/AcrD/AcrF family L1B16_05475 PF00529 HlyD membrane-fusion protein of T1SS L1B16_05475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_05480 PF00009 Elongation factor Tu GTP binding domain L1B16_05485 PF01507 Phosphoadenosine phosphosulfate reductase family L1B16_05490 PF00258 Flavodoxin L1B16_05490 PF00175 Oxidoreductase NAD-binding domain L1B16_05490 PF00667 FAD binding domain L1B16_05495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L1B16_05495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L1B16_05500 PF01507 Phosphoadenosine phosphosulfate reductase family L1B16_05520 PF00672 HAMP domain L1B16_05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_05520 PF00072 Response regulator receiver domain L1B16_05520 PF00512 His Kinase A (phospho-acceptor) domain L1B16_05520 PF01627 Hpt domain L1B16_05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_05530 PF03466 LysR substrate binding domain L1B16_05535 PF10414 Sirohaem synthase dimerisation region L1B16_05535 PF14824 Sirohaem biosynthesis protein central L1B16_05535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1B16_05540 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_05550 PF01661 Macro domain L1B16_05555 PF00274 Fructose-bisphosphate aldolase class-I L1B16_05560 PF02887 Pyruvate kinase, alpha/beta domain L1B16_05560 PF00224 Pyruvate kinase, barrel domain L1B16_05565 PF13419 Haloacid dehalogenase-like hydrolase L1B16_05570 PF00162 Phosphoglycerate kinase L1B16_05590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L1B16_05590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L1B16_05605 PF03922 OmpW family L1B16_05615 PF04273 Putative phosphatase (DUF442) L1B16_05615 PF00753 Metallo-beta-lactamase superfamily L1B16_05625 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_05630 PF03459 TOBE domain L1B16_05630 PF00005 ABC transporter L1B16_05655 PF03965 Penicillinase repressor L1B16_05675 PF01476 LysM domain L1B16_05675 PF03734 L,D-transpeptidase catalytic domain L1B16_05680 PF01551 Peptidase family M23 L1B16_05680 PF04225 Opacity-associated protein A LysM-like domain L1B16_05690 PF03466 LysR substrate binding domain L1B16_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_05695 PF00593 TonB dependent receptor L1B16_05695 PF07715 TonB-dependent Receptor Plug Domain L1B16_05700 PF02779 Transketolase, pyrimidine binding domain L1B16_05700 PF02780 Transketolase, C-terminal domain L1B16_05700 PF00456 Transketolase, thiamine diphosphate binding domain L1B16_05705 PF00375 Sodium:dicarboxylate symporter family L1B16_05735 PF07726 ATPase family associated with various cellular activities (AAA) L1B16_05735 PF17863 AAA lid domain L1B16_05745 PF04351 Pilus assembly protein, PilP L1B16_05750 PF04350 Pilus assembly protein, PilO L1B16_05755 PF05137 Fimbrial assembly protein (PilN) L1B16_05760 PF11104 Type IV pilus assembly protein PilM; L1B16_05765 PF17092 Penicillin-binding protein OB-like domain L1B16_05765 PF00905 Penicillin binding protein transpeptidase domain L1B16_05765 PF00912 Transglycosylase L1B16_05775 PF00285 Citrate synthase, C-terminal domain L1B16_05780 PF01197 Ribosomal protein L31 L1B16_05785 PF01156 Inosine-uridine preferring nucleoside hydrolase L1B16_05790 PF17191 RecG wedge domain L1B16_05790 PF00271 Helicase conserved C-terminal domain L1B16_05790 PF00270 DEAD/DEAH box helicase L1B16_05795 PF01042 Endoribonuclease L-PSP L1B16_05800 PF13291 ACT domain L1B16_05800 PF04607 Region found in RelA / SpoT proteins L1B16_05800 PF02824 TGS domain L1B16_05805 PF01192 RNA polymerase Rpb6 L1B16_05810 PF00625 Guanylate kinase L1B16_05815 PF03755 YicC-like family, N-terminal region L1B16_05815 PF08340 Domain of unknown function (DUF1732) L1B16_05820 PF01138 3' exoribonuclease family, domain 1 L1B16_05820 PF03725 3' exoribonuclease family, domain 2 L1B16_05830 PF01725 Ham1 family L1B16_05835 PF06969 HemN C-terminal domain L1B16_05835 PF04055 Radical SAM superfamily L1B16_05850 PF00557 Metallopeptidase family M24 L1B16_05860 PF00557 Metallopeptidase family M24 L1B16_05860 PF05195 Aminopeptidase P, N-terminal domain L1B16_05865 PF03695 Uncharacterised protein family (UPF0149) L1B16_05875 PF05164 Cell division protein ZapA L1B16_05885 PF01812 5-formyltetrahydrofolate cyclo-ligase family L1B16_05895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L1B16_05905 PF13369 Transglutaminase-like superfamily L1B16_05915 PF00301 Rubredoxin L1B16_05920 PF02581 Thiamine monophosphate synthase L1B16_05930 PF00202 Aminotransferase class-III L1B16_05940 PF01494 FAD binding domain L1B16_05945 PF00127 Copper binding proteins, plastocyanin/azurin family L1B16_05950 PF00155 Aminotransferase class I and II L1B16_05960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L1B16_05960 PF00034 Cytochrome c L1B16_05980 PF00202 Aminotransferase class-III L1B16_06010 PF01569 PAP2 superfamily L1B16_06015 PF01062 Bestrophin, RFP-TM, chloride channel L1B16_06025 PF01225 Mur ligase family, catalytic domain L1B16_06025 PF02875 Mur ligase family, glutamate ligase domain L1B16_06025 PF08245 Mur ligase middle domain L1B16_06035 PF00365 Phosphofructokinase L1B16_06045 PF03030 Inorganic H+ pyrophosphatase L1B16_06055 PF00719 Inorganic pyrophosphatase L1B16_06065 PF07715 TonB-dependent Receptor Plug Domain L1B16_06065 PF00593 TonB dependent receptor L1B16_06070 PF12833 Helix-turn-helix domain L1B16_06075 PF18500 CadC C-terminal domain 1 L1B16_06075 PF00486 Transcriptional regulatory protein, C terminal L1B16_06080 PF13667 ThiC-associated domain L1B16_06080 PF01964 Radical SAM ThiC family L1B16_06085 PF07715 TonB-dependent Receptor Plug Domain L1B16_06085 PF00593 TonB dependent receptor L1B16_06090 PF07676 WD40-like Beta Propeller Repeat L1B16_06090 PF00326 Prolyl oligopeptidase family L1B16_06095 PF00672 HAMP domain L1B16_06095 PF02743 Cache domain L1B16_06095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_06105 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L1B16_06105 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L1B16_06110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1B16_06110 PF00205 Thiamine pyrophosphate enzyme, central domain L1B16_06110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L1B16_06120 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_06125 PF00682 HMGL-like L1B16_06125 PF08502 LeuA allosteric (dimerisation) domain L1B16_06130 PF00180 Isocitrate/isopropylmalate dehydrogenase L1B16_06145 PF00694 Aconitase C-terminal domain L1B16_06150 PF00330 Aconitase family (aconitate hydratase) L1B16_06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_06160 PF00990 Diguanylate cyclase, GGDEF domain L1B16_06175 PF02321 Outer membrane efflux protein L1B16_06180 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) L1B16_06185 PF03279 Bacterial lipid A biosynthesis acyltransferase L1B16_06210 PF03949 Malic enzyme, NAD binding domain L1B16_06210 PF01515 Phosphate acetyl/butaryl transferase L1B16_06210 PF00390 Malic enzyme, N-terminal domain L1B16_06215 PF00375 Sodium:dicarboxylate symporter family L1B16_06225 PF02743 Cache domain L1B16_06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_06225 PF00512 His Kinase A (phospho-acceptor) domain L1B16_06230 PF07690 Major Facilitator Superfamily L1B16_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_06240 PF03466 LysR substrate binding domain L1B16_06250 PF07715 TonB-dependent Receptor Plug Domain L1B16_06250 PF00593 TonB dependent receptor L1B16_06255 PF00248 Aldo/keto reductase family L1B16_06260 PF00072 Response regulator receiver domain L1B16_06260 PF00196 Bacterial regulatory proteins, luxR family L1B16_06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_06270 PF08521 Two-component sensor kinase N-terminal L1B16_06270 PF00512 His Kinase A (phospho-acceptor) domain L1B16_06275 PF00072 Response regulator receiver domain L1B16_06275 PF00486 Transcriptional regulatory protein, C terminal L1B16_06285 PF03600 Citrate transporter L1B16_06290 PF00106 short chain dehydrogenase L1B16_06295 PF00356 Bacterial regulatory proteins, lacI family L1B16_06310 PF00128 Alpha amylase, catalytic domain L1B16_06330 PF03193 RsgA GTPase L1B16_06350 PF06594 Haemolysin-type calcium binding protein related domain L1B16_06350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) L1B16_06365 PF03412 Peptidase C39 family L1B16_06365 PF00664 ABC transporter transmembrane region L1B16_06365 PF00005 ABC transporter L1B16_06370 PF00155 Aminotransferase class I and II L1B16_06385 PF07715 TonB-dependent Receptor Plug Domain L1B16_06385 PF00593 TonB dependent receptor L1B16_06390 PF01522 Polysaccharide deacetylase L1B16_06395 PF00462 Glutaredoxin L1B16_06400 PF05394 Avirulence protein L1B16_06410 PF01979 Amidohydrolase family L1B16_06415 PF01979 Amidohydrolase family L1B16_06460 PF00586 AIR synthase related protein, N-terminal domain L1B16_06460 PF02769 AIR synthase related protein, C-terminal domain L1B16_06465 PF01029 NusB family L1B16_06470 PF00885 6,7-dimethyl-8-ribityllumazine synthase L1B16_06475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L1B16_06475 PF00925 GTP cyclohydrolase II L1B16_06480 PF00677 Lumazine binding domain L1B16_06490 PF01872 RibD C-terminal domain L1B16_06490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L1B16_06500 PF03477 ATP cone domain L1B16_06505 PF00464 Serine hydroxymethyltransferase L1B16_06515 PF00005 ABC transporter L1B16_06515 PF12848 ABC transporter L1B16_06520 PF01327 Polypeptide deformylase L1B16_06525 PF03960 ArsC family L1B16_06540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L1B16_06540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L1B16_06575 PF00593 TonB dependent receptor L1B16_06575 PF07715 TonB-dependent Receptor Plug Domain L1B16_06585 PF00392 Bacterial regulatory proteins, gntR family L1B16_06585 PF07702 UTRA domain L1B16_06595 PF00263 Bacterial type II and III secretion system protein L1B16_06595 PF03958 Bacterial type II/III secretion system short domain L1B16_06605 PF10741 Type II secretion system (T2SS), protein M subtype b L1B16_06610 PF05137 Fimbrial assembly protein (PilN) L1B16_06615 PF03934 Type II secretion system (T2SS), protein K L1B16_06625 PF07963 Prokaryotic N-terminal methylation motif L1B16_06630 PF12019 Type II transport protein GspH L1B16_06635 PF08334 Type II secretion system (T2SS), protein G L1B16_06640 PF00482 Type II secretion system (T2SS), protein F L1B16_06645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L1B16_06645 PF00437 Type II/IV secretion system protein L1B16_06650 PF00082 Subtilase family L1B16_06650 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_06655 PF03895 YadA-like membrane anchor domain L1B16_06655 PF05662 Coiled stalk of trimeric autotransporter adhesin L1B16_06655 PF13018 Extended Signal Peptide of Type V secretion system L1B16_06655 PF05658 Head domain of trimeric autotransporter adhesin L1B16_06660 PF00082 Subtilase family L1B16_06660 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_06665 PF13018 Extended Signal Peptide of Type V secretion system L1B16_06665 PF03895 YadA-like membrane anchor domain L1B16_06665 PF05658 Head domain of trimeric autotransporter adhesin L1B16_06665 PF05662 Coiled stalk of trimeric autotransporter adhesin L1B16_06670 PF02769 AIR synthase related protein, C-terminal domain L1B16_06670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L1B16_06670 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal L1B16_06675 PF10411 Disulfide bond isomerase protein N-terminus L1B16_06675 PF13098 Thioredoxin-like domain L1B16_06680 PF02899 Phage integrase, N-terminal SAM-like domain L1B16_06680 PF00589 Phage integrase family L1B16_06690 PF03739 Lipopolysaccharide export system permease LptF/LptG L1B16_06700 PF02789 Cytosol aminopeptidase family, N-terminal domain L1B16_06700 PF00883 Cytosol aminopeptidase family, catalytic domain L1B16_06710 PF08264 Anticodon-binding domain of tRNA L1B16_06710 PF00133 tRNA synthetases class I (I, L, M and V) L1B16_06710 PF10458 Valyl tRNA synthetase tRNA binding arm L1B16_06735 PF01066 CDP-alcohol phosphatidyltransferase L1B16_06745 PF03129 Anticodon binding domain L1B16_06745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1B16_06745 PF04073 Aminoacyl-tRNA editing domain L1B16_06760 PF02405 Permease MlaE L1B16_06765 PF00005 ABC transporter L1B16_06770 PF03886 ABC-type transport auxiliary lipoprotein component L1B16_06770 PF02470 MlaD protein L1B16_06790 PF14307 Glycosyltransferase WbsX L1B16_06790 PF05045 Rhamnan synthesis protein F L1B16_06795 PF01144 Coenzyme A transferase L1B16_06800 PF01144 Coenzyme A transferase L1B16_06805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1B16_06805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1B16_06805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1B16_06805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1B16_06810 PF01050 Mannose-6-phosphate isomerase L1B16_06810 PF00483 Nucleotidyl transferase L1B16_06815 PF04321 RmlD substrate binding domain L1B16_06820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L1B16_06825 PF00483 Nucleotidyl transferase L1B16_06830 PF16363 GDP-mannose 4,6 dehydratase L1B16_06835 PF01012 Electron transfer flavoprotein domain L1B16_06840 PF01012 Electron transfer flavoprotein domain L1B16_06840 PF00766 Electron transfer flavoprotein FAD-binding domain L1B16_06850 PF01040 UbiA prenyltransferase family L1B16_06855 PF04030 D-arabinono-1,4-lactone oxidase L1B16_06855 PF01565 FAD binding domain L1B16_06860 PF00106 short chain dehydrogenase L1B16_06865 PF01370 NAD dependent epimerase/dehydratase family L1B16_06870 PF01593 Flavin containing amine oxidoreductase L1B16_06905 PF00535 Glycosyl transferase family 2 L1B16_06915 PF00005 ABC transporter L1B16_06925 PF01053 Cys/Met metabolism PLP-dependent enzyme L1B16_06930 PF00571 CBS domain L1B16_06930 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_06950 PF00437 Type II/IV secretion system protein L1B16_06955 PF02798 Glutathione S-transferase, N-terminal domain L1B16_06955 PF14497 Glutathione S-transferase, C-terminal domain L1B16_06965 PF00270 DEAD/DEAH box helicase L1B16_06965 PF00271 Helicase conserved C-terminal domain L1B16_06985 PF07715 TonB-dependent Receptor Plug Domain L1B16_06985 PF00593 TonB dependent receptor L1B16_06990 PF01242 6-pyruvoyl tetrahydropterin synthase L1B16_07005 PF13185 GAF domain L1B16_07015 PF00756 Putative esterase L1B16_07020 PF07715 TonB-dependent Receptor Plug Domain L1B16_07020 PF00593 TonB dependent receptor L1B16_07025 PF13419 Haloacid dehalogenase-like hydrolase L1B16_07030 PF11799 impB/mucB/samB family C-terminal domain L1B16_07030 PF00817 impB/mucB/samB family L1B16_07035 PF07977 FabA-like domain L1B16_07040 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_07040 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_07045 PF01432 Peptidase family M3 L1B16_07060 PF07732 Multicopper oxidase L1B16_07060 PF07731 Multicopper oxidase L1B16_07060 PF00394 Multicopper oxidase L1B16_07065 PF05275 Copper resistance protein B precursor (CopB) L1B16_07070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1B16_07090 PF01380 SIS domain L1B16_07095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_07100 PF00005 ABC transporter L1B16_07110 PF00005 ABC transporter L1B16_07110 PF02687 FtsX-like permease family L1B16_07110 PF12704 MacB-like periplasmic core domain L1B16_07120 PF02954 Bacterial regulatory protein, Fis family L1B16_07120 PF00072 Response regulator receiver domain L1B16_07120 PF00158 Sigma-54 interaction domain L1B16_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07125 PF00512 His Kinase A (phospho-acceptor) domain L1B16_07135 PF14602 Hexapeptide repeat of succinyl-transferase L1B16_07135 PF12804 MobA-like NTP transferase domain L1B16_07135 PF00132 Bacterial transferase hexapeptide (six repeats) L1B16_07145 PF01817 Chorismate mutase type II L1B16_07150 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L1B16_07150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L1B16_07155 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1B16_07155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1B16_07160 PF00231 ATP synthase L1B16_07165 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1B16_07165 PF00306 ATP synthase alpha/beta chain, C terminal domain L1B16_07165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1B16_07170 PF00213 ATP synthase delta (OSCP) subunit L1B16_07175 PF00430 ATP synthase B/B' CF(0) L1B16_07180 PF00137 ATP synthase subunit C L1B16_07185 PF00119 ATP synthase A chain L1B16_07210 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_07210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1B16_07220 PF02817 e3 binding domain L1B16_07220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1B16_07220 PF00364 Biotin-requiring enzyme L1B16_07250 PF03180 NLPA lipoprotein L1B16_07255 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_07260 PF09383 NIL domain L1B16_07260 PF00005 ABC transporter L1B16_07265 PF00892 EamA-like transporter family L1B16_07270 PF04461 Protein of unknown function (DUF520) L1B16_07280 PF00512 His Kinase A (phospho-acceptor) domain L1B16_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07280 PF01627 Hpt domain L1B16_07280 PF00989 PAS fold L1B16_07280 PF00072 Response regulator receiver domain L1B16_07280 PF18415 Histidine kinase receptor ArcB trans-membrane domain L1B16_07300 PF01479 S4 domain L1B16_07300 PF00849 RNA pseudouridylate synthase L1B16_07305 PF08468 Methyltransferase small domain N-terminal L1B16_07305 PF05175 Methyltransferase small domain L1B16_07315 PF07995 Glucose / Sorbosone dehydrogenase L1B16_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07325 PF00512 His Kinase A (phospho-acceptor) domain L1B16_07325 PF00989 PAS fold L1B16_07345 PF00842 Alanine racemase, C-terminal domain L1B16_07345 PF01168 Alanine racemase, N-terminal domain L1B16_07350 PF01266 FAD dependent oxidoreductase L1B16_07355 PF01037 Lrp/AsnC ligand binding domain L1B16_07365 PF01641 SelR domain L1B16_07370 PF01618 MotA/TolQ/ExbB proton channel family L1B16_07375 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1B16_07375 PF00691 OmpA family L1B16_07400 PF01061 ABC-2 type transporter L1B16_07405 PF00005 ABC transporter L1B16_07410 PF00999 Sodium/hydrogen exchanger family L1B16_07420 PF02469 Fasciclin domain L1B16_07425 PF03167 Uracil DNA glycosylase superfamily L1B16_07435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L1B16_07445 PF03466 LysR substrate binding domain L1B16_07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_07450 PF03358 NADPH-dependent FMN reductase L1B16_07455 PF00248 Aldo/keto reductase family L1B16_07465 PF01431 Peptidase family M13 L1B16_07465 PF05649 Peptidase family M13 L1B16_07480 PF13520 Amino acid permease L1B16_07490 PF00072 Response regulator receiver domain L1B16_07490 PF04397 LytTr DNA-binding domain L1B16_07495 PF02743 Cache domain L1B16_07495 PF00672 HAMP domain L1B16_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07495 PF06580 Histidine kinase L1B16_07515 PF05974 Domain of unknown function (DUF892) L1B16_07520 PF05067 Manganese containing catalase L1B16_07530 PF08448 PAS fold L1B16_07530 PF03705 CheR methyltransferase, all-alpha domain L1B16_07530 PF01339 CheB methylesterase L1B16_07530 PF01739 CheR methyltransferase, SAM binding domain L1B16_07545 PF00072 Response regulator receiver domain L1B16_07545 PF00158 Sigma-54 interaction domain L1B16_07545 PF02954 Bacterial regulatory protein, Fis family L1B16_07580 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_07580 PF13823 Alcohol dehydrogenase GroES-associated L1B16_07580 PF00107 Zinc-binding dehydrogenase L1B16_07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_07605 PF03466 LysR substrate binding domain L1B16_07610 PF07690 Major Facilitator Superfamily L1B16_07635 PF07715 TonB-dependent Receptor Plug Domain L1B16_07635 PF00593 TonB dependent receptor L1B16_07650 PF00005 ABC transporter L1B16_07665 PF01042 Endoribonuclease L-PSP L1B16_07680 PF00672 HAMP domain L1B16_07680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_07680 PF02203 Tar ligand binding domain homologue L1B16_07715 PF01740 STAS domain L1B16_07715 PF00916 Sulfate permease family L1B16_07720 PF00654 Voltage gated chloride channel L1B16_07770 PF00072 Response regulator receiver domain L1B16_07770 PF00486 Transcriptional regulatory protein, C terminal L1B16_07775 PF00512 His Kinase A (phospho-acceptor) domain L1B16_07775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07775 PF08521 Two-component sensor kinase N-terminal L1B16_07840 PF00182 Chitinase class I L1B16_07860 PF00072 Response regulator receiver domain L1B16_07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_07860 PF13426 PAS domain L1B16_07895 PF00583 Acetyltransferase (GNAT) family L1B16_07950 PF04245 37-kD nucleoid-associated bacterial protein L1B16_08040 PF04546 Sigma-70, non-essential region L1B16_08040 PF00140 Sigma-70 factor, region 1.2 L1B16_08040 PF04542 Sigma-70 region 2 L1B16_08040 PF04539 Sigma-70 region 3 L1B16_08040 PF03979 Sigma-70 factor, region 1.1 L1B16_08040 PF04545 Sigma-70, region 4 L1B16_08045 PF02580 D-Tyr-tRNA(Tyr) deacylase L1B16_08050 PF03279 Bacterial lipid A biosynthesis acyltransferase L1B16_08060 PF00925 GTP cyclohydrolase II L1B16_08075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L1B16_08080 PF00535 Glycosyl transferase family 2 L1B16_08095 PF01189 16S rRNA methyltransferase RsmB/F L1B16_08095 PF01029 NusB family L1B16_08100 PF00551 Formyl transferase L1B16_08100 PF02911 Formyl transferase, C-terminal domain L1B16_08105 PF01327 Polypeptide deformylase L1B16_08110 PF01476 LysM domain L1B16_08115 PF02481 DNA recombination-mediator protein A L1B16_08115 PF17782 DprA winged helix domain L1B16_08120 PF04361 Protein of unknown function (DUF494) L1B16_08125 PF07963 Prokaryotic N-terminal methylation motif L1B16_08125 PF00114 Pilin (bacterial filament) L1B16_08135 PF01131 DNA topoisomerase L1B16_08135 PF01751 Toprim domain L1B16_08135 PF13368 Topoisomerase C-terminal repeat L1B16_08140 PF01300 Telomere recombination L1B16_08165 PF01343 Peptidase family S49 L1B16_08170 PF01554 MatE L1B16_08185 PF00270 DEAD/DEAH box helicase L1B16_08185 PF00271 Helicase conserved C-terminal domain L1B16_08185 PF17764 3′ DNA-binding domain (3′BD) L1B16_08185 PF18074 Primosomal protein N C-terminal domain L1B16_08185 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L1B16_08190 PF00043 Glutathione S-transferase, C-terminal domain L1B16_08190 PF13417 Glutathione S-transferase, N-terminal domain L1B16_08205 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_08210 PF03458 UPF0126 domain L1B16_08215 PF04542 Sigma-70 region 2 L1B16_08215 PF04545 Sigma-70, region 4 L1B16_08220 PF03167 Uracil DNA glycosylase superfamily L1B16_08225 PF00072 Response regulator receiver domain L1B16_08225 PF01339 CheB methylesterase L1B16_08230 PF18075 FtsX extracellular domain L1B16_08235 PF00005 ABC transporter L1B16_08240 PF00270 DEAD/DEAH box helicase L1B16_08240 PF12300 ATP-dependent RNA helicase RhlB L1B16_08240 PF00271 Helicase conserved C-terminal domain L1B16_08245 PF00085 Thioredoxin L1B16_08250 PF07498 Rho termination factor, N-terminal domain L1B16_08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1B16_08250 PF07497 Rho termination factor, RNA-binding domain L1B16_08260 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) L1B16_08265 PF03971 Monomeric isocitrate dehydrogenase L1B16_08275 PF01476 LysM domain L1B16_08275 PF00756 Putative esterase L1B16_08280 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term L1B16_08280 PF14489 QueF-like protein L1B16_08285 PF07687 Peptidase dimerisation domain L1B16_08285 PF01546 Peptidase family M20/M25/M40 L1B16_08290 PF13533 Biotin-lipoyl like L1B16_08295 PF00873 AcrB/AcrD/AcrF family L1B16_08300 PF00873 AcrB/AcrD/AcrF family L1B16_08305 PF07063 Domain of unknown function (DUF1338) L1B16_08345 PF01427 D-ala-D-ala dipeptidase L1B16_08350 PF01510 N-acetylmuramoyl-L-alanine amidase L1B16_08360 PF13378 Enolase C-terminal domain-like L1B16_08360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L1B16_08370 PF13520 Amino acid permease L1B16_08385 PF05360 yiaA/B two helix domain L1B16_08390 PF07995 Glucose / Sorbosone dehydrogenase L1B16_08395 PF14310 Fibronectin type III-like domain L1B16_08395 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_08395 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_08400 PF02152 Dihydroneopterin aldolase L1B16_08405 PF00814 Glycoprotease family L1B16_08410 PF01165 Ribosomal protein S21 L1B16_08415 PF09424 Yqey-like protein L1B16_08420 PF03631 Virulence factor BrkB L1B16_08425 PF01807 CHC2 zinc finger L1B16_08425 PF08275 DNA primase catalytic core, N-terminal domain L1B16_08425 PF10410 DnaB-helicase binding domain of primase L1B16_08425 PF08278 DNA primase DnaG DnaB-binding L1B16_08435 PF13593 SBF-like CPA transporter family (DUF4137) L1B16_08445 PF01040 UbiA prenyltransferase family L1B16_08470 PF00510 Cytochrome c oxidase subunit III L1B16_08475 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 L1B16_08485 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1B16_08490 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L1B16_08490 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L1B16_08500 PF00171 Aldehyde dehydrogenase family L1B16_08500 PF01619 Proline dehydrogenase L1B16_08500 PF14850 DNA-binding domain of Proline dehydrogenase L1B16_08500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain L1B16_08530 PF00579 tRNA synthetases class I (W and Y) L1B16_08535 PF01551 Peptidase family M23 L1B16_08535 PF04225 Opacity-associated protein A LysM-like domain L1B16_08540 PF03702 Anhydro-N-acetylmuramic acid kinase L1B16_08550 PF07690 Major Facilitator Superfamily L1B16_08555 PF03372 Endonuclease/Exonuclease/phosphatase family L1B16_08560 PF00156 Phosphoribosyl transferase domain L1B16_08570 PF13614 AAA domain L1B16_08575 PF02195 ParB-like nuclease domain L1B16_08575 PF17762 HTH domain found in ParB protein L1B16_08590 PF01370 NAD dependent epimerase/dehydratase family L1B16_08595 PF00535 Glycosyl transferase family 2 L1B16_08610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1B16_08610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1B16_08610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1B16_08610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1B16_08615 PF00692 dUTPase L1B16_08620 PF02441 Flavoprotein L1B16_08620 PF04127 DNA / pantothenate metabolism flavoprotein L1B16_08625 PF04002 RadC-like JAB domain L1B16_08630 PF00750 tRNA synthetases class I (R) L1B16_08630 PF05746 DALR anticodon binding domain L1B16_08630 PF03485 Arginyl tRNA synthetase N terminal domain L1B16_08645 PF00106 short chain dehydrogenase L1B16_08650 PF01757 Acyltransferase family L1B16_08655 PF03033 Glycosyltransferase family 28 N-terminal domain L1B16_08660 PF00975 Thioesterase domain L1B16_08660 PF00501 AMP-binding enzyme L1B16_08660 PF13193 AMP-binding enzyme C-terminal domain L1B16_08660 PF00668 Condensation domain L1B16_08660 PF00975 Thioesterase domain L1B16_08660 PF00550 Phosphopantetheine attachment site L1B16_08660 PF00550 Phosphopantetheine attachment site L1B16_08660 PF00668 Condensation domain L1B16_08660 PF13193 AMP-binding enzyme C-terminal domain L1B16_08660 PF00501 AMP-binding enzyme L1B16_08665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L1B16_08665 PF17944 Arginine decarboxylase C-terminal helical extension L1B16_08665 PF17810 Arginine decarboxylase helical bundle domain L1B16_08670 PF17284 Spermidine synthase tetramerisation domain L1B16_08695 PF00543 Nitrogen regulatory protein P-II L1B16_08700 PF04380 Membrane fusogenic activity L1B16_08710 PF09722 Protein of unknown function (DUF2384) L1B16_08710 PF01936 NYN domain L1B16_08735 PF00580 UvrD/REP helicase N-terminal domain L1B16_08735 PF13361 UvrD-like helicase C-terminal domain L1B16_08785 PF12792 CSS motif domain associated with EAL L1B16_08785 PF00563 EAL domain L1B16_08790 PF00487 Fatty acid desaturase L1B16_08795 PF00175 Oxidoreductase NAD-binding domain L1B16_08795 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_08795 PF00970 Oxidoreductase FAD-binding domain L1B16_08800 PF00440 Bacterial regulatory proteins, tetR family L1B16_08835 PF08338 Domain of unknown function (DUF1731) L1B16_08835 PF01370 NAD dependent epimerase/dehydratase family L1B16_08840 PF00072 Response regulator receiver domain L1B16_08840 PF00486 Transcriptional regulatory protein, C terminal L1B16_08845 PF00512 His Kinase A (phospho-acceptor) domain L1B16_08845 PF08521 Two-component sensor kinase N-terminal L1B16_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_08865 PF00595 PDZ domain L1B16_08885 PF01594 AI-2E family transporter L1B16_08890 PF13419 Haloacid dehalogenase-like hydrolase L1B16_08895 PF02789 Cytosol aminopeptidase family, N-terminal domain L1B16_08895 PF00883 Cytosol aminopeptidase family, catalytic domain L1B16_08905 PF04542 Sigma-70 region 2 L1B16_08905 PF08281 Sigma-70, region 4 L1B16_08925 PF00072 Response regulator receiver domain L1B16_08925 PF00196 Bacterial regulatory proteins, luxR family L1B16_08930 PF07730 Histidine kinase L1B16_08935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_08940 PF00005 ABC transporter L1B16_08960 PF00892 EamA-like transporter family L1B16_08965 PF00892 EamA-like transporter family L1B16_08980 PF00753 Metallo-beta-lactamase superfamily L1B16_08985 PF00579 tRNA synthetases class I (W and Y) L1B16_08990 PF05532 CsbD-like L1B16_09005 PF00491 Arginase family L1B16_09030 PF02223 Thymidylate kinase L1B16_09045 PF03309 Type III pantothenate kinase L1B16_09050 PF08279 HTH domain L1B16_09050 PF03099 Biotin/lipoate A/B protein ligase family L1B16_09050 PF02237 Biotin protein ligase C terminal domain L1B16_09060 PF06167 Glucose-regulated metallo-peptidase M90 L1B16_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_09080 PF00486 Transcriptional regulatory protein, C terminal L1B16_09080 PF00072 Response regulator receiver domain L1B16_09090 PF01207 Dihydrouridine synthase (Dus) L1B16_09105 PF06628 Catalase-related immune-responsive L1B16_09105 PF00199 Catalase L1B16_09115 PF06733 DEAD_2 L1B16_09115 PF13307 Helicase C-terminal domain L1B16_09130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L1B16_09130 PF01488 Shikimate / quinate 5-dehydrogenase L1B16_09130 PF08501 Shikimate dehydrogenase substrate binding domain L1B16_09140 PF00667 FAD binding domain L1B16_09140 PF00175 Oxidoreductase NAD-binding domain L1B16_09140 PF00258 Flavodoxin L1B16_09145 PF00490 Delta-aminolevulinic acid dehydratase L1B16_09170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region L1B16_09170 PF00326 Prolyl oligopeptidase family L1B16_09195 PF04820 Tryptophan halogenase L1B16_09210 PF00005 ABC transporter L1B16_09220 PF01381 Helix-turn-helix L1B16_09230 PF01229 Glycosyl hydrolases family 39 L1B16_09240 PF02583 Metal-sensitive transcriptional repressor L1B16_09245 PF01545 Cation efflux family L1B16_09250 PF00175 Oxidoreductase NAD-binding domain L1B16_09250 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_09250 PF00970 Oxidoreductase FAD-binding domain L1B16_09255 PF00005 ABC transporter L1B16_09260 PF01061 ABC-2 type transporter L1B16_09265 PF08546 Ketopantoate reductase PanE/ApbA C terminal L1B16_09265 PF02558 Ketopantoate reductase PanE/ApbA L1B16_09275 PF03061 Thioesterase superfamily L1B16_09290 PF00268 Ribonucleotide reductase, small chain L1B16_09295 PF00317 Ribonucleotide reductase, all-alpha domain L1B16_09295 PF02867 Ribonucleotide reductase, barrel domain L1B16_09295 PF03477 ATP cone domain L1B16_09305 PF13607 Succinyl-CoA ligase like flavodoxin domain L1B16_09305 PF13380 CoA binding domain L1B16_09305 PF00583 Acetyltransferase (GNAT) family L1B16_09310 PF03448 MgtE intracellular N domain L1B16_09310 PF00571 CBS domain L1B16_09310 PF01769 Divalent cation transporter L1B16_09315 PF00999 Sodium/hydrogen exchanger family L1B16_09315 PF02254 TrkA-N domain L1B16_09320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L1B16_09320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L1B16_09325 PF00723 Glycosyl hydrolases family 15 L1B16_09340 PF05166 YcgL domain L1B16_09345 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_09345 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_09360 PF04820 Tryptophan halogenase L1B16_09400 PF07977 FabA-like domain L1B16_09405 PF01553 Acyltransferase L1B16_09415 PF00550 Phosphopantetheine attachment site L1B16_09420 PF04820 Tryptophan halogenase L1B16_09455 PF01218 Coproporphyrinogen III oxidase L1B16_09460 PF00476 DNA polymerase family A L1B16_09460 PF01367 5'-3' exonuclease, C-terminal SAM fold L1B16_09460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1B16_09460 PF01612 3'-5' exonuclease L1B16_09470 PF00069 Protein kinase domain L1B16_09470 PF03793 PASTA domain L1B16_09495 PF14602 Hexapeptide repeat of succinyl-transferase L1B16_09495 PF12464 Maltose acetyltransferase L1B16_09500 PF00580 UvrD/REP helicase N-terminal domain L1B16_09500 PF13361 UvrD-like helicase C-terminal domain L1B16_09510 PF13091 PLD-like domain L1B16_09510 PF13396 Phospholipase_D-nuclease N-terminal L1B16_09515 PF03466 LysR substrate binding domain L1B16_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_09520 PF03737 Aldolase/RraA L1B16_09525 PF04303 PrpF protein L1B16_09530 PF04909 Amidohydrolase L1B16_09535 PF00471 Ribosomal protein L33 L1B16_09540 PF00830 Ribosomal L28 family L1B16_09545 PF00873 AcrB/AcrD/AcrF family L1B16_09550 PF13533 Biotin-lipoyl like L1B16_09570 PF02527 rRNA small subunit methyltransferase G L1B16_09575 PF09423 PhoD-like phosphatase L1B16_09575 PF16655 PhoD-like phosphatase, N-terminal domain L1B16_09580 PF16655 PhoD-like phosphatase, N-terminal domain L1B16_09580 PF09423 PhoD-like phosphatase L1B16_09585 PF01648 4'-phosphopantetheinyl transferase superfamily L1B16_09590 PF04226 Transglycosylase associated protein L1B16_09605 PF00480 ROK family L1B16_09615 PF00639 PPIC-type PPIASE domain L1B16_09625 PF00474 Sodium:solute symporter family L1B16_09640 PF13193 AMP-binding enzyme C-terminal domain L1B16_09640 PF00501 AMP-binding enzyme L1B16_09640 PF16177 Acetyl-coenzyme A synthetase N-terminus L1B16_09645 PF00072 Response regulator receiver domain L1B16_09645 PF00196 Bacterial regulatory proteins, luxR family L1B16_09670 PF04616 Glycosyl hydrolases family 43 L1B16_09670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L1B16_09675 PF00248 Aldo/keto reductase family L1B16_09690 PF01557 Fumarylacetoacetate (FAA) hydrolase family L1B16_09695 PF13378 Enolase C-terminal domain-like L1B16_09695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L1B16_09700 PF05336 L-rhamnose mutarotase L1B16_09705 PF07690 Major Facilitator Superfamily L1B16_09710 PF09339 IclR helix-turn-helix domain L1B16_09710 PF01614 Bacterial transcriptional regulator L1B16_09715 PF02659 Putative manganese efflux pump L1B16_09720 PF00072 Response regulator receiver domain L1B16_09720 PF09456 RcsC Alpha-Beta-Loop (ABL) L1B16_09720 PF00512 His Kinase A (phospho-acceptor) domain L1B16_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_09725 PF06165 Glycosyltransferase family 36 L1B16_09725 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain L1B16_09740 PF13570 PQQ-like domain L1B16_09740 PF01011 PQQ enzyme repeat L1B16_09740 PF13360 PQQ-like domain L1B16_09760 PF04357 TamB, inner membrane protein subunit of TAM complex L1B16_09765 PF01103 Surface antigen L1B16_09765 PF17243 POTRA domain TamA domain 1 L1B16_09770 PF00593 TonB dependent receptor L1B16_09770 PF07715 TonB-dependent Receptor Plug Domain L1B16_09775 PF13181 Tetratricopeptide repeat L1B16_09780 PF02092 Glycyl-tRNA synthetase beta subunit L1B16_09780 PF05746 DALR anticodon binding domain L1B16_09785 PF02091 Glycyl-tRNA synthetase alpha subunit L1B16_09790 PF00437 Type II/IV secretion system protein L1B16_09790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L1B16_09795 PF00117 Glutamine amidotransferase class-I L1B16_09795 PF00958 GMP synthase C terminal domain L1B16_09805 PF00902 Sec-independent protein translocase protein (TatC) L1B16_09810 PF02416 mttA/Hcf106 family L1B16_09815 PF02416 mttA/Hcf106 family L1B16_09825 PF00762 Ferrochelatase L1B16_09830 PF12697 Alpha/beta hydrolase family L1B16_09840 PF04381 Putative exonuclease, RdgC L1B16_09845 PF01171 PP-loop family L1B16_09855 PF00356 Bacterial regulatory proteins, lacI family L1B16_09860 PF07477 Glycosyl hydrolase family 67 C-terminus L1B16_09860 PF07488 Glycosyl hydrolase family 67 middle domain L1B16_09860 PF03648 Glycosyl hydrolase family 67 N-terminus L1B16_09870 PF13378 Enolase C-terminal domain-like L1B16_09870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L1B16_09875 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L1B16_09875 PF04616 Glycosyl hydrolases family 43 L1B16_09880 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_09880 PF07691 PA14 domain L1B16_09880 PF14310 Fibronectin type III-like domain L1B16_09880 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_09885 PF08125 Mannitol dehydrogenase C-terminal domain L1B16_09885 PF01232 Mannitol dehydrogenase Rossmann domain L1B16_09910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1B16_09910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1B16_09935 PF00331 Glycosyl hydrolase family 10 L1B16_09940 PF02837 Glycosyl hydrolases family 2, sugar binding domain L1B16_09940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L1B16_09940 PF16355 Domain of unknown function (DUF4982) L1B16_09940 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 L1B16_09940 PF00703 Glycosyl hydrolases family 2 L1B16_09945 PF02614 Glucuronate isomerase L1B16_09970 PF04616 Glycosyl hydrolases family 43 L1B16_10015 PF08659 KR domain L1B16_10015 PF00550 Phosphopantetheine attachment site L1B16_10015 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_10015 PF14765 Polyketide synthase dehydratase L1B16_10015 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_10015 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_10015 PF00698 Acyl transferase domain L1B16_10015 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_10020 PF01553 Acyltransferase L1B16_10030 PF00356 Bacterial regulatory proteins, lacI family L1B16_10045 PF04820 Tryptophan halogenase L1B16_10050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L1B16_10055 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) L1B16_10060 PF04337 Protein of unknown function, DUF480 L1B16_10070 PF13302 Acetyltransferase (GNAT) domain L1B16_10075 PF00580 UvrD/REP helicase N-terminal domain L1B16_10075 PF13361 UvrD-like helicase C-terminal domain L1B16_10080 PF00265 Thymidine kinase L1B16_10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_10085 PF00360 Phytochrome region L1B16_10085 PF08446 PAS fold L1B16_10085 PF01590 GAF domain L1B16_10085 PF00512 His Kinase A (phospho-acceptor) domain L1B16_10090 PF04349 Periplasmic glucan biosynthesis protein, MdoG L1B16_10100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L1B16_10100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L1B16_10100 PF06827 Zinc finger found in FPG and IleRS L1B16_10130 PF03594 Benzoate membrane transport protein L1B16_10140 PF08446 PAS fold L1B16_10140 PF13426 PAS domain L1B16_10140 PF00360 Phytochrome region L1B16_10140 PF01590 GAF domain L1B16_10145 PF01126 Heme oxygenase L1B16_10150 PF07690 Major Facilitator Superfamily L1B16_10155 PF01263 Aldose 1-epimerase L1B16_10170 PF03466 LysR substrate binding domain L1B16_10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_10180 PF02810 SEC-C motif L1B16_10185 PF01925 Sulfite exporter TauE/SafE L1B16_10190 PF07715 TonB-dependent Receptor Plug Domain L1B16_10190 PF00593 TonB dependent receptor L1B16_10210 PF01227 GTP cyclohydrolase I L1B16_10220 PF07869 Protein of unknown function (DUF1656) L1B16_10225 PF00529 HlyD membrane-fusion protein of T1SS L1B16_10225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_10230 PF02321 Outer membrane efflux protein L1B16_10235 PF04632 Fusaric acid resistance protein family L1B16_10240 PF00083 Sugar (and other) transporter L1B16_10250 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family L1B16_10255 PF13396 Phospholipase_D-nuclease N-terminal L1B16_10255 PF13091 PLD-like domain L1B16_10325 PF00849 RNA pseudouridylate synthase L1B16_10350 PF01381 Helix-turn-helix L1B16_10355 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB L1B16_10360 PF13538 UvrD-like helicase C-terminal domain L1B16_10365 PF12705 PD-(D/E)XK nuclease superfamily L1B16_10365 PF00580 UvrD/REP helicase N-terminal domain L1B16_10365 PF13361 UvrD-like helicase C-terminal domain L1B16_10370 PF17946 RecC C-terminal domain L1B16_10395 PF00583 Acetyltransferase (GNAT) family L1B16_10405 PF00005 ABC transporter L1B16_10410 PF02405 Permease MlaE L1B16_10415 PF02470 MlaD protein L1B16_10420 PF05494 MlaC protein L1B16_10430 PF04333 MlaA lipoprotein L1B16_10440 PF00255 Glutathione peroxidase L1B16_10450 PF02646 RmuC family L1B16_10460 PF13520 Amino acid permease L1B16_10465 PF07971 Glycosyl hydrolase family 92 L1B16_10465 PF17678 Glycosyl hydrolase family 92 N-terminal domain L1B16_10480 PF00990 Diguanylate cyclase, GGDEF domain L1B16_10485 PF17853 GGDEF-like domain L1B16_10485 PF05651 Putative sugar diacid recognition L1B16_10485 PF13556 PucR C-terminal helix-turn-helix domain L1B16_10490 PF02595 Glycerate kinase family L1B16_10495 PF07690 Major Facilitator Superfamily L1B16_10510 PF01804 Penicillin amidase L1B16_10515 PF07715 TonB-dependent Receptor Plug Domain L1B16_10515 PF00593 TonB dependent receptor L1B16_10545 PF10672 S-adenosylmethionine-dependent methyltransferase L1B16_10545 PF17785 PUA-like domain L1B16_10550 PF03741 Integral membrane protein TerC family L1B16_10555 PF01694 Rhomboid family L1B16_10560 PF03009 Glycerophosphoryl diester phosphodiesterase family L1B16_10570 PF01569 PAP2 superfamily L1B16_10575 PF01926 50S ribosome-binding GTPase L1B16_10575 PF12631 MnmE helical domain L1B16_10575 PF10396 GTP-binding protein TrmE N-terminus L1B16_10580 PF01522 Polysaccharide deacetylase L1B16_10585 PF02096 60Kd inner membrane protein L1B16_10585 PF14849 YidC periplasmic domain L1B16_10590 PF00825 Ribonuclease P L1B16_10595 PF00468 Ribosomal protein L34 L1B16_10600 PF00308 Bacterial dnaA protein L1B16_10600 PF08299 Bacterial dnaA protein helix-turn-helix L1B16_10600 PF11638 DnaA N-terminal domain L1B16_10605 PF00712 DNA polymerase III beta subunit, N-terminal domain L1B16_10605 PF02768 DNA polymerase III beta subunit, C-terminal domain L1B16_10605 PF02767 DNA polymerase III beta subunit, central domain L1B16_10610 PF02463 RecF/RecN/SMC N terminal domain L1B16_10615 PF00204 DNA gyrase B L1B16_10615 PF00986 DNA gyrase B subunit, carboxyl terminus L1B16_10615 PF18053 DNA gyrase B subunit insert domain L1B16_10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_10615 PF01751 Toprim domain L1B16_10625 PF01435 Peptidase family M48 L1B16_10635 PF03544 Gram-negative bacterial TonB protein C-terminal L1B16_10640 PF01618 MotA/TolQ/ExbB proton channel family L1B16_10645 PF02472 Biopolymer transport protein ExbD/TolR L1B16_10650 PF02472 Biopolymer transport protein ExbD/TolR L1B16_10655 PF02472 Biopolymer transport protein ExbD/TolR L1B16_10660 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L1B16_10670 PF13091 PLD-like domain L1B16_10670 PF13396 Phospholipase_D-nuclease N-terminal L1B16_10675 PF04055 Radical SAM superfamily L1B16_10685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) L1B16_10700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1B16_10700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1B16_10705 PF13180 PDZ domain L1B16_10705 PF03572 Peptidase family S41 L1B16_10710 PF01551 Peptidase family M23 L1B16_10720 PF04389 Peptidase family M28 L1B16_10730 PF00150 Cellulase (glycosyl hydrolase family 5) L1B16_10735 PF00150 Cellulase (glycosyl hydrolase family 5) L1B16_10740 PF00150 Cellulase (glycosyl hydrolase family 5) L1B16_10745 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_10745 PF00107 Zinc-binding dehydrogenase L1B16_10755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L1B16_10755 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_10760 PF00310 Glutamine amidotransferases class-II L1B16_10760 PF04898 Glutamate synthase central domain L1B16_10760 PF01645 Conserved region in glutamate synthase L1B16_10760 PF01493 GXGXG motif L1B16_10775 PF00398 Ribosomal RNA adenine dimethylase L1B16_10795 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain L1B16_10795 PF06165 Glycosyltransferase family 36 L1B16_10795 PF10091 Putative glucoamylase L1B16_10845 PF00270 DEAD/DEAH box helicase L1B16_10845 PF09369 Domain of unknown function (DUF1998) L1B16_10845 PF00271 Helicase conserved C-terminal domain L1B16_10850 PF03006 Haemolysin-III related L1B16_10890 PF03466 LysR substrate binding domain L1B16_10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_10910 PF01638 HxlR-like helix-turn-helix L1B16_10935 PF04542 Sigma-70 region 2 L1B16_10935 PF08281 Sigma-70, region 4 L1B16_10940 PF05532 CsbD-like L1B16_10945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_10945 PF00512 His Kinase A (phospho-acceptor) domain L1B16_10945 PF13188 PAS domain L1B16_10945 PF08448 PAS fold L1B16_10945 PF00072 Response regulator receiver domain L1B16_10960 PF16485 Protealysin propeptide L1B16_10960 PF02868 Thermolysin metallopeptidase, alpha-helical domain L1B16_10960 PF01447 Thermolysin metallopeptidase, catalytic domain L1B16_10970 PF09297 NADH pyrophosphatase zinc ribbon domain L1B16_10970 PF00293 NUDIX domain L1B16_10975 PF07859 alpha/beta hydrolase fold L1B16_10985 PF00085 Thioredoxin L1B16_10990 PF08946 Osmosensory transporter coiled coil L1B16_10990 PF00083 Sugar (and other) transporter L1B16_11030 PF00440 Bacterial regulatory proteins, tetR family L1B16_11045 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain L1B16_11050 PF00155 Aminotransferase class I and II L1B16_11055 PF07715 TonB-dependent Receptor Plug Domain L1B16_11055 PF00593 TonB dependent receptor L1B16_11065 PF02423 Ornithine cyclodeaminase/mu-crystallin family L1B16_11075 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1B16_11080 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_11090 PF01590 GAF domain L1B16_11090 PF02954 Bacterial regulatory protein, Fis family L1B16_11090 PF00158 Sigma-54 interaction domain L1B16_11095 PF00171 Aldehyde dehydrogenase family L1B16_11100 PF00107 Zinc-binding dehydrogenase L1B16_11100 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_11115 PF02735 Ku70/Ku80 beta-barrel domain L1B16_11120 PF13298 DNA polymerase Ligase (LigD) L1B16_11120 PF01068 ATP dependent DNA ligase domain L1B16_11120 PF04679 ATP dependent DNA ligase C terminal region L1B16_11125 PF01070 FMN-dependent dehydrogenase L1B16_11130 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family L1B16_11135 PF07730 Histidine kinase L1B16_11155 PF00486 Transcriptional regulatory protein, C terminal L1B16_11160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase L1B16_11160 PF12241 Trans-2-enoyl-CoA reductase catalytic region L1B16_11160 PF07055 Enoyl reductase FAD binding domain L1B16_11170 PF00294 pfkB family carbohydrate kinase L1B16_11185 PF13495 Phage integrase, N-terminal SAM-like domain L1B16_11185 PF00589 Phage integrase family L1B16_11240 PF04542 Sigma-70 region 2 L1B16_11240 PF08281 Sigma-70, region 4 L1B16_11255 PF00795 Carbon-nitrogen hydrolase L1B16_11255 PF02540 NAD synthase L1B16_11280 PF11896 Domain of unknown function (DUF3416) L1B16_11280 PF00128 Alpha amylase, catalytic domain L1B16_11285 PF00128 Alpha amylase, catalytic domain L1B16_11285 PF16657 Maltogenic Amylase, C-terminal domain L1B16_11290 PF00128 Alpha amylase, catalytic domain L1B16_11290 PF02806 Alpha amylase, C-terminal all-beta domain L1B16_11290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1B16_11320 PF00248 Aldo/keto reductase family L1B16_11330 PF00135 Carboxylesterase family L1B16_11335 PF13472 GDSL-like Lipase/Acylhydrolase family L1B16_11335 PF07859 alpha/beta hydrolase fold L1B16_11345 PF03480 Bacterial extracellular solute-binding protein, family 7 L1B16_11355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component L1B16_11360 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L1B16_11360 PF04616 Glycosyl hydrolases family 43 L1B16_11365 PF00356 Bacterial regulatory proteins, lacI family L1B16_11370 PF04962 KduI/IolB family L1B16_11385 PF00657 GDSL-like Lipase/Acylhydrolase L1B16_11395 PF00351 Biopterin-dependent aromatic amino acid hydroxylase L1B16_11400 PF01037 Lrp/AsnC ligand binding domain L1B16_11405 PF00593 TonB dependent receptor L1B16_11405 PF07715 TonB-dependent Receptor Plug Domain L1B16_11405 PF07660 Secretin and TonB N terminus short domain L1B16_11410 PF01734 Patatin-like phospholipase L1B16_11420 PF00005 ABC transporter L1B16_11435 PF00005 ABC transporter L1B16_11435 PF00571 CBS domain L1B16_11440 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_11450 PF12867 DinB superfamily L1B16_11450 PF03781 Sulfatase-modifying factor enzyme 1 L1B16_11455 PF10017 Histidine-specific methyltransferase, SAM-dependent L1B16_11485 PF10609 NUBPL iron-transfer P-loop NTPase L1B16_11485 PF01883 Iron-sulfur cluster assembly protein L1B16_11495 PF04264 YceI-like domain L1B16_11500 PF13091 PLD-like domain L1B16_11505 PF03061 Thioesterase superfamily L1B16_11525 PF01161 Phosphatidylethanolamine-binding protein L1B16_11535 PF02673 Bacitracin resistance protein BacA L1B16_11540 PF00120 Glutamine synthetase, catalytic domain L1B16_11540 PF03951 Glutamine synthetase, beta-Grasp domain L1B16_11545 PF00543 Nitrogen regulatory protein P-II L1B16_11550 PF00909 Ammonium Transporter Family L1B16_11555 PF00512 His Kinase A (phospho-acceptor) domain L1B16_11555 PF00989 PAS fold L1B16_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_11560 PF02954 Bacterial regulatory protein, Fis family L1B16_11560 PF00158 Sigma-54 interaction domain L1B16_11560 PF00072 Response regulator receiver domain L1B16_11565 PF00080 Copper/zinc superoxide dismutase (SODC) L1B16_11570 PF00080 Copper/zinc superoxide dismutase (SODC) L1B16_11585 PF02803 Thiolase, C-terminal domain L1B16_11585 PF00108 Thiolase, N-terminal domain L1B16_11605 PF02602 Uroporphyrinogen-III synthase HemD L1B16_11625 PF00581 Rhodanese-like domain L1B16_11630 PF02556 Preprotein translocase subunit SecB L1B16_11635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L1B16_11635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L1B16_11645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1B16_11645 PF00205 Thiamine pyrophosphate enzyme, central domain L1B16_11645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L1B16_11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_11655 PF00158 Sigma-54 interaction domain L1B16_11655 PF00072 Response regulator receiver domain L1B16_11655 PF02954 Bacterial regulatory protein, Fis family L1B16_11670 PF07690 Major Facilitator Superfamily L1B16_11675 PF00588 SpoU rRNA Methylase family L1B16_11690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1B16_11690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1B16_11695 PF02661 Fic/DOC family L1B16_11695 PF13784 Fic/DOC family N-terminal L1B16_11700 PF01555 DNA methylase L1B16_11700 PF18273 Type III R-M EcoP15I C-terminal domain L1B16_11710 PF00561 alpha/beta hydrolase fold L1B16_11715 PF03692 Putative zinc- or iron-chelating domain L1B16_11720 PF00501 AMP-binding enzyme L1B16_11725 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family L1B16_11740 PF01820 D-ala D-ala ligase N-terminus L1B16_11740 PF07478 D-ala D-ala ligase C-terminus L1B16_11750 PF03109 ABC1 family L1B16_11755 PF01596 O-methyltransferase L1B16_11760 PF00849 RNA pseudouridylate synthase L1B16_11770 PF00472 RF-1 domain L1B16_11780 PF01112 Asparaginase L1B16_11785 PF01432 Peptidase family M3 L1B16_11790 PF10502 Signal peptidase, peptidase S26 L1B16_11795 PF12706 Beta-lactamase superfamily domain L1B16_11810 PF12833 Helix-turn-helix domain L1B16_11815 PF00999 Sodium/hydrogen exchanger family L1B16_11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_11820 PF03466 LysR substrate binding domain L1B16_11825 PF01274 Malate synthase L1B16_11830 PF00463 Isocitrate lyase family L1B16_11835 PF00990 Diguanylate cyclase, GGDEF domain L1B16_11855 PF00326 Prolyl oligopeptidase family L1B16_11860 PF02785 Biotin carboxylase C-terminal domain L1B16_11860 PF00289 Biotin carboxylase, N-terminal domain L1B16_11860 PF00364 Biotin-requiring enzyme L1B16_11860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1B16_11860 PF18140 Propionyl-coenzyme A carboxylase BT domain L1B16_11865 PF01039 Carboxyl transferase domain L1B16_11870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_11870 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_11870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_11925 PF02492 CobW/HypB/UreG, nucleotide-binding domain L1B16_11925 PF07683 Cobalamin synthesis protein cobW C-terminal domain L1B16_11945 PF03969 AFG1-like ATPase L1B16_11950 PF01047 MarR family L1B16_11955 PF02566 OsmC-like protein L1B16_11960 PF12697 Alpha/beta hydrolase family L1B16_11980 PF00248 Aldo/keto reductase family L1B16_11985 PF16884 N-terminal domain of oxidoreductase L1B16_11985 PF00107 Zinc-binding dehydrogenase L1B16_11990 PF00248 Aldo/keto reductase family L1B16_12000 PF00849 RNA pseudouridylate synthase L1B16_12010 PF08482 ATP-dependent helicase C-terminal L1B16_12010 PF00270 DEAD/DEAH box helicase L1B16_12010 PF04408 Helicase associated domain (HA2) L1B16_12010 PF00271 Helicase conserved C-terminal domain L1B16_12015 PF02203 Tar ligand binding domain homologue L1B16_12015 PF00672 HAMP domain L1B16_12015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_12020 PF07308 Protein of unknown function (DUF1456) L1B16_12025 PF00576 HIUase/Transthyretin family L1B16_12030 PF13454 FAD-NAD(P)-binding L1B16_12035 PF09349 OHCU decarboxylase L1B16_12035 PF01014 Uricase L1B16_12050 PF00266 Aminotransferase class-V L1B16_12055 PF07687 Peptidase dimerisation domain L1B16_12055 PF01546 Peptidase family M20/M25/M40 L1B16_12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_12060 PF03466 LysR substrate binding domain L1B16_12070 PF03466 LysR substrate binding domain L1B16_12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_12075 PF00561 alpha/beta hydrolase fold L1B16_12095 PF01425 Amidase L1B16_12100 PF01156 Inosine-uridine preferring nucleoside hydrolase L1B16_12110 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_12115 PF00355 Rieske [2Fe-2S] domain L1B16_12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_12120 PF03466 LysR substrate binding domain L1B16_12125 PF01026 TatD related DNase L1B16_12140 PF03466 LysR substrate binding domain L1B16_12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_12145 PF07690 Major Facilitator Superfamily L1B16_12150 PF00082 Subtilase family L1B16_12150 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_12160 PF00072 Response regulator receiver domain L1B16_12160 PF13188 PAS domain L1B16_12160 PF08448 PAS fold L1B16_12160 PF00512 His Kinase A (phospho-acceptor) domain L1B16_12165 PF00486 Transcriptional regulatory protein, C terminal L1B16_12165 PF00072 Response regulator receiver domain L1B16_12170 PF02146 Sir2 family L1B16_12175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1B16_12180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L1B16_12180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L1B16_12190 PF00551 Formyl transferase L1B16_12195 PF07690 Major Facilitator Superfamily L1B16_12200 PF00072 Response regulator receiver domain L1B16_12200 PF00486 Transcriptional regulatory protein, C terminal L1B16_12215 PF00529 HlyD membrane-fusion protein of T1SS L1B16_12215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_12220 PF00873 AcrB/AcrD/AcrF family L1B16_12225 PF02321 Outer membrane efflux protein L1B16_12235 PF02687 FtsX-like permease family L1B16_12235 PF12704 MacB-like periplasmic core domain L1B16_12240 PF00005 ABC transporter L1B16_12240 PF02687 FtsX-like permease family L1B16_12240 PF12704 MacB-like periplasmic core domain L1B16_12290 PF02219 Methylenetetrahydrofolate reductase L1B16_12295 PF02677 Epoxyqueuosine reductase QueH L1B16_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_12300 PF03466 LysR substrate binding domain L1B16_12305 PF03358 NADPH-dependent FMN reductase L1B16_12315 PF08267 Cobalamin-independent synthase, N-terminal domain L1B16_12315 PF01717 Cobalamin-independent synthase, Catalytic domain L1B16_12325 PF05368 NmrA-like family L1B16_12330 PF01638 HxlR-like helix-turn-helix L1B16_12340 PF00672 HAMP domain L1B16_12340 PF02203 Tar ligand binding domain homologue L1B16_12340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_12385 PF00920 Dehydratase family L1B16_12405 PF00132 Bacterial transferase hexapeptide (six repeats) L1B16_12415 PF11871 Domain of unknown function (DUF3391) L1B16_12415 PF01966 HD domain L1B16_12435 PF00171 Aldehyde dehydrogenase family L1B16_12445 PF01494 FAD binding domain L1B16_12455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L1B16_12455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L1B16_12460 PF00230 Major intrinsic protein L1B16_12465 PF01266 FAD dependent oxidoreductase L1B16_12465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L1B16_12470 PF08220 DeoR-like helix-turn-helix domain L1B16_12470 PF00455 DeoR C terminal sensor domain L1B16_12475 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_12475 PF00970 Oxidoreductase FAD-binding domain L1B16_12485 PF00355 Rieske [2Fe-2S] domain L1B16_12490 PF01144 Coenzyme A transferase L1B16_12495 PF01144 Coenzyme A transferase L1B16_12500 PF02803 Thiolase, C-terminal domain L1B16_12500 PF00108 Thiolase, N-terminal domain L1B16_12505 PF00775 Dioxygenase L1B16_12505 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal L1B16_12510 PF00775 Dioxygenase L1B16_12515 PF10397 Adenylosuccinate lyase C-terminus L1B16_12515 PF00206 Lyase L1B16_12520 PF12146 Serine aminopeptidase, S33 L1B16_12525 PF02627 Carboxymuconolactone decarboxylase family L1B16_12535 PF09339 IclR helix-turn-helix domain L1B16_12535 PF01614 Bacterial transcriptional regulator L1B16_12545 PF00873 AcrB/AcrD/AcrF family L1B16_12555 PF01134 Glucose inhibited division protein A L1B16_12555 PF13932 GidA associated domain L1B16_12565 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_12590 PF13649 Methyltransferase domain L1B16_12600 PF12697 Alpha/beta hydrolase family L1B16_12605 PF00155 Aminotransferase class I and II L1B16_12610 PF06968 Biotin and Thiamin Synthesis associated domain L1B16_12610 PF04055 Radical SAM superfamily L1B16_12620 PF01040 UbiA prenyltransferase family L1B16_12640 PF03150 Di-haem cytochrome c peroxidase L1B16_12685 PF00593 TonB dependent receptor L1B16_12685 PF07715 TonB-dependent Receptor Plug Domain L1B16_12695 PF00005 ABC transporter L1B16_12710 PF00425 chorismate binding enzyme L1B16_12720 PF00975 Thioesterase domain L1B16_12730 PF00698 Acyl transferase domain L1B16_12730 PF00668 Condensation domain L1B16_12730 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_12730 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_12730 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_12730 PF00550 Phosphopantetheine attachment site L1B16_12740 PF00550 Phosphopantetheine attachment site L1B16_12740 PF00668 Condensation domain L1B16_12740 PF00501 AMP-binding enzyme L1B16_12740 PF08242 Methyltransferase domain L1B16_12755 PF07715 TonB-dependent Receptor Plug Domain L1B16_12755 PF00593 TonB dependent receptor L1B16_12760 PF08021 Siderophore-interacting FAD-binding domain L1B16_12760 PF04954 Siderophore-interacting protein L1B16_12760 PF00664 ABC transporter transmembrane region L1B16_12760 PF00005 ABC transporter L1B16_12765 PF00005 ABC transporter L1B16_12795 PF00924 Mechanosensitive ion channel L1B16_12795 PF12795 Mechanosensitive ion channel porin domain L1B16_12795 PF12794 Mechanosensitive ion channel inner membrane domain 1 L1B16_12800 PF00884 Sulfatase L1B16_12805 PF03109 ABC1 family L1B16_12810 PF05661 Protein of unknown function (DUF808) L1B16_12815 PF00990 Diguanylate cyclase, GGDEF domain L1B16_12820 PF08323 Starch synthase catalytic domain L1B16_12820 PF00534 Glycosyl transferases group 1 L1B16_12825 PF02806 Alpha amylase, C-terminal all-beta domain L1B16_12825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1B16_12825 PF00128 Alpha amylase, catalytic domain L1B16_12830 PF00128 Alpha amylase, catalytic domain L1B16_12830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1B16_12830 PF11941 Domain of unknown function (DUF3459) L1B16_12835 PF02446 4-alpha-glucanotransferase L1B16_12840 PF00128 Alpha amylase, catalytic domain L1B16_12850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1B16_12850 PF00128 Alpha amylase, catalytic domain L1B16_12855 PF13460 NAD(P)H-binding L1B16_12875 PF06903 VirK protein L1B16_12880 PF06903 VirK protein L1B16_12885 PF02321 Outer membrane efflux protein L1B16_12890 PF00440 Bacterial regulatory proteins, tetR family L1B16_12900 PF00873 AcrB/AcrD/AcrF family L1B16_12905 PF00106 short chain dehydrogenase L1B16_12910 PF01638 HxlR-like helix-turn-helix L1B16_12920 PF00271 Helicase conserved C-terminal domain L1B16_12920 PF00270 DEAD/DEAH box helicase L1B16_12930 PF02817 e3 binding domain L1B16_12930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1B16_12930 PF00364 Biotin-requiring enzyme L1B16_12940 PF02779 Transketolase, pyrimidine binding domain L1B16_12940 PF02780 Transketolase, C-terminal domain L1B16_12945 PF00676 Dehydrogenase E1 component L1B16_12955 PF03301 Tryptophan 2,3-dioxygenase L1B16_12960 PF00854 POT family L1B16_12970 PF01047 MarR family L1B16_12975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1B16_12980 PF04209 homogentisate 1,2-dioxygenase L1B16_12995 PF03334 Na+/H+ antiporter subunit L1B16_13000 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) L1B16_13010 PF00361 Proton-conducting membrane transporter L1B16_13015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L1B16_13020 PF13244 Domain of unknown function (DUF4040) L1B16_13020 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter L1B16_13020 PF00361 Proton-conducting membrane transporter L1B16_13020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1B16_13035 PF02868 Thermolysin metallopeptidase, alpha-helical domain L1B16_13035 PF01483 Proprotein convertase P-domain L1B16_13035 PF07504 Fungalysin/Thermolysin Propeptide Motif L1B16_13035 PF01447 Thermolysin metallopeptidase, catalytic domain L1B16_13060 PF01259 SAICAR synthetase L1B16_13065 PF00226 DnaJ domain L1B16_13065 PF01556 DnaJ C terminal domain L1B16_13065 PF00684 DnaJ central domain L1B16_13075 PF00834 Ribulose-phosphate 3 epimerase family L1B16_13085 PF00781 Diacylglycerol kinase catalytic domain L1B16_13090 PF04715 Anthranilate synthase component I, N terminal region L1B16_13090 PF00425 chorismate binding enzyme L1B16_13105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_13105 PF03466 LysR substrate binding domain L1B16_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_13110 PF03466 LysR substrate binding domain L1B16_13115 PF00106 short chain dehydrogenase L1B16_13125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L1B16_13125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L1B16_13130 PF05819 NolX protein L1B16_13185 PF01313 Bacterial export proteins, family 3 L1B16_13190 PF00813 FliP family L1B16_13205 PF00771 FHIPEP family L1B16_13210 PF01312 FlhB HrpN YscU SpaS Family L1B16_13225 PF01514 Secretory protein of YscJ/FliF family L1B16_13240 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1B16_13240 PF18269 T3SS EscN ATPase C-terminal domain L1B16_13240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1B16_13255 PF00263 Bacterial type II and III secretion system protein L1B16_13255 PF03958 Bacterial type II/III secretion system short domain L1B16_13265 PF01464 Transglycosylase SLT domain L1B16_13280 PF00117 Glutamine amidotransferase class-I L1B16_13290 PF02885 Glycosyl transferase family, helical bundle domain L1B16_13290 PF00591 Glycosyl transferase family, a/b domain L1B16_13295 PF00218 Indole-3-glycerol phosphate synthase L1B16_13305 PF00325 Bacterial regulatory proteins, crp family L1B16_13305 PF00027 Cyclic nucleotide-binding domain L1B16_13310 PF02675 S-adenosylmethionine decarboxylase L1B16_13315 PF00893 Small Multidrug Resistance protein L1B16_13320 PF03232 Ubiquinone biosynthesis protein COQ7 L1B16_13325 PF00572 Ribosomal protein L13 L1B16_13330 PF00380 Ribosomal protein S9/S16 L1B16_13345 PF00293 NUDIX domain L1B16_13355 PF00210 Ferritin-like domain L1B16_13360 PF00072 Response regulator receiver domain L1B16_13360 PF00672 HAMP domain L1B16_13360 PF01627 Hpt domain L1B16_13360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1B16_13360 PF00512 His Kinase A (phospho-acceptor) domain L1B16_13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_13365 PF00072 Response regulator receiver domain L1B16_13365 PF00486 Transcriptional regulatory protein, C terminal L1B16_13385 PF01521 Iron-sulphur cluster biosynthesis L1B16_13395 PF00293 NUDIX domain L1B16_13395 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain L1B16_13395 PF09297 NADH pyrophosphatase zinc ribbon domain L1B16_13400 PF03186 CobD/Cbib protein L1B16_13400 PF17113 Regulatory signalling modulator protein AmpE L1B16_13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_13420 PF03466 LysR substrate binding domain L1B16_13425 PF07690 Major Facilitator Superfamily L1B16_13430 PF12805 FUSC-like inner membrane protein yccS L1B16_13435 PF02844 Phosphoribosylglycinamide synthetase, N domain L1B16_13435 PF02843 Phosphoribosylglycinamide synthetase, C domain L1B16_13435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L1B16_13440 PF01808 AICARFT/IMPCHase bienzyme L1B16_13440 PF02142 MGS-like domain L1B16_13455 PF00818 Ice nucleation protein repeat L1B16_13455 PF00818 Ice nucleation protein repeat L1B16_13460 PF02954 Bacterial regulatory protein, Fis family L1B16_13495 PF02785 Biotin carboxylase C-terminal domain L1B16_13495 PF00289 Biotin carboxylase, N-terminal domain L1B16_13495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1B16_13505 PF00364 Biotin-requiring enzyme L1B16_13510 PF01220 Dehydroquinase class II L1B16_13520 PF11412 Disulphide bond corrector protein DsbC L1B16_13520 PF02683 Cytochrome C biogenesis protein transmembrane region L1B16_13525 PF03091 CutA1 divalent ion tolerance protein L1B16_13530 PF04231 Endonuclease I L1B16_13535 PF00166 Chaperonin 10 Kd subunit L1B16_13540 PF00118 TCP-1/cpn60 chaperonin family L1B16_13550 PF00593 TonB dependent receptor L1B16_13550 PF07715 TonB-dependent Receptor Plug Domain L1B16_13560 PF00793 DAHP synthetase I family L1B16_13565 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain L1B16_13565 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain L1B16_13585 PF16220 Domain of unknown function (DUF4880) L1B16_13585 PF04773 FecR protein L1B16_13590 PF07715 TonB-dependent Receptor Plug Domain L1B16_13590 PF00593 TonB dependent receptor L1B16_13590 PF07660 Secretin and TonB N terminus short domain L1B16_13610 PF08335 GlnD PII-uridylyltransferase L1B16_13610 PF03710 Glutamate-ammonia ligase adenylyltransferase L1B16_13635 PF00881 Nitroreductase family L1B16_13640 PF04264 YceI-like domain L1B16_13655 PF16957 Malonate decarboxylase, alpha subunit, transporter L1B16_13660 PF06857 Malonate decarboxylase delta subunit (MdcD) L1B16_13665 PF01039 Carboxyl transferase domain L1B16_13675 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG L1B16_13680 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase L1B16_13685 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_13685 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_13685 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_13685 PF00698 Acyl transferase domain L1B16_13685 PF08659 KR domain L1B16_13685 PF00550 Phosphopantetheine attachment site L1B16_13695 PF00392 Bacterial regulatory proteins, gntR family L1B16_13695 PF07729 FCD domain L1B16_13700 PF13419 Haloacid dehalogenase-like hydrolase L1B16_13735 PF07745 Glycosyl hydrolase family 53 L1B16_13740 PF17831 Pyruvate dehydrogenase E1 component middle domain L1B16_13740 PF00456 Transketolase, thiamine diphosphate binding domain L1B16_13745 PF13614 AAA domain L1B16_13795 PF08281 Sigma-70, region 4 L1B16_13795 PF04542 Sigma-70 region 2 L1B16_13810 PF07715 TonB-dependent Receptor Plug Domain L1B16_13810 PF00593 TonB dependent receptor L1B16_13815 PF00326 Prolyl oligopeptidase family L1B16_13840 PF00392 Bacterial regulatory proteins, gntR family L1B16_13840 PF07729 FCD domain L1B16_13855 PF07859 alpha/beta hydrolase fold L1B16_13870 PF13409 Glutathione S-transferase, N-terminal domain L1B16_13905 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region L1B16_13905 PF00326 Prolyl oligopeptidase family L1B16_13915 PF07759 Protein of unknown function (DUF1615) L1B16_13920 PF00990 Diguanylate cyclase, GGDEF domain L1B16_13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_13955 PF00892 EamA-like transporter family L1B16_13960 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1B16_13975 PF00324 Amino acid permease L1B16_13985 PF01544 CorA-like Mg2+ transporter protein L1B16_13995 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA L1B16_14000 PF01204 Trehalase L1B16_14010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L1B16_14010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L1B16_14030 PF03707 Bacterial signalling protein N terminal repeat L1B16_14030 PF00563 EAL domain L1B16_14030 PF00990 Diguanylate cyclase, GGDEF domain L1B16_14035 PF02203 Tar ligand binding domain homologue L1B16_14035 PF00672 HAMP domain L1B16_14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_14040 PF00553 Cellulose binding domain L1B16_14040 PF00150 Cellulase (glycosyl hydrolase family 5) L1B16_14045 PF01740 STAS domain L1B16_14045 PF00916 Sulfate permease family L1B16_14050 PF00990 Diguanylate cyclase, GGDEF domain L1B16_14060 PF13632 Glycosyl transferase family group 2 L1B16_14075 PF04397 LytTr DNA-binding domain L1B16_14075 PF00072 Response regulator receiver domain L1B16_14080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L1B16_14080 PF03900 Porphobilinogen deaminase, C-terminal domain L1B16_14105 PF00326 Prolyl oligopeptidase family L1B16_14105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L1B16_14110 PF00155 Aminotransferase class I and II L1B16_14115 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L1B16_14115 PF00326 Prolyl oligopeptidase family L1B16_14120 PF04304 Protein of unknown function (DUF454) L1B16_14130 PF01678 Diaminopimelate epimerase L1B16_14140 PF02899 Phage integrase, N-terminal SAM-like domain L1B16_14140 PF00589 Phage integrase family L1B16_14145 PF00227 Proteasome subunit L1B16_14150 PF07724 AAA domain (Cdc48 subfamily) L1B16_14150 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_14150 PF10431 C-terminal, D2-small domain, of ClpB protein L1B16_14160 PF13673 Acetyltransferase (GNAT) domain L1B16_14165 PF13533 Biotin-lipoyl like L1B16_14175 PF01209 ubiE/COQ5 methyltransferase family L1B16_14180 PF00563 EAL domain L1B16_14180 PF00990 Diguanylate cyclase, GGDEF domain L1B16_14180 PF03707 Bacterial signalling protein N terminal repeat L1B16_14185 PF11838 ERAP1-like C-terminal domain L1B16_14185 PF01433 Peptidase family M1 domain L1B16_14200 PF13360 PQQ-like domain L1B16_14205 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1B16_14220 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_14220 PF00107 Zinc-binding dehydrogenase L1B16_14230 PF02954 Bacterial regulatory protein, Fis family L1B16_14230 PF00158 Sigma-54 interaction domain L1B16_14230 PF01590 GAF domain L1B16_14235 PF00294 pfkB family carbohydrate kinase L1B16_14250 PF04085 rod shape-determining protein MreC L1B16_14260 PF03717 Penicillin-binding Protein dimerisation domain L1B16_14260 PF00905 Penicillin binding protein transpeptidase domain L1B16_14265 PF01098 Cell cycle protein L1B16_14270 PF00295 Glycosyl hydrolases family 28 L1B16_14275 PF13406 Transglycosylase SLT domain L1B16_14280 PF03330 Lytic transglycolase L1B16_14280 PF05036 Sporulation related domain L1B16_14285 PF07943 Penicillin-binding protein 5, C-terminal domain L1B16_14285 PF00768 D-alanyl-D-alanine carboxypeptidase L1B16_14295 PF04359 Protein of unknown function (DUF493) L1B16_14300 PF03099 Biotin/lipoate A/B protein ligase family L1B16_14305 PF04055 Radical SAM superfamily L1B16_14305 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L1B16_14310 PF11818 C-terminal domain of tail specific protease (DUF3340) L1B16_14310 PF00595 PDZ domain L1B16_14310 PF03572 Peptidase family S41 L1B16_14310 PF17804 Tail specific protease N-terminal domain L1B16_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_14320 PF03466 LysR substrate binding domain L1B16_14330 PF01467 Cytidylyltransferase-like L1B16_14330 PF00293 NUDIX domain L1B16_14345 PF05175 Methyltransferase small domain L1B16_14345 PF08468 Methyltransferase small domain N-terminal L1B16_14365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L1B16_14365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L1B16_14370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1B16_14370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L1B16_14375 PF04972 BON domain L1B16_14380 PF01590 GAF domain L1B16_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_14380 PF00512 His Kinase A (phospho-acceptor) domain L1B16_14380 PF08446 PAS fold L1B16_14380 PF00360 Phytochrome region L1B16_14385 PF00072 Response regulator receiver domain L1B16_14390 PF00512 His Kinase A (phospho-acceptor) domain L1B16_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_14395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1B16_14435 PF03958 Bacterial type II/III secretion system short domain L1B16_14435 PF00263 Bacterial type II and III secretion system protein L1B16_14445 PF00482 Type II secretion system (T2SS), protein F L1B16_14450 PF08334 Type II secretion system (T2SS), protein G L1B16_14450 PF07963 Prokaryotic N-terminal methylation motif L1B16_14455 PF12019 Type II transport protein GspH L1B16_14455 PF07963 Prokaryotic N-terminal methylation motif L1B16_14495 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 L1B16_14495 PF00703 Glycosyl hydrolases family 2 L1B16_14495 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L1B16_14495 PF02837 Glycosyl hydrolases family 2, sugar binding domain L1B16_14495 PF16355 Domain of unknown function (DUF4982) L1B16_14510 PF00392 Bacterial regulatory proteins, gntR family L1B16_14510 PF07702 UTRA domain L1B16_14515 PF07690 Major Facilitator Superfamily L1B16_14520 PF00356 Bacterial regulatory proteins, lacI family L1B16_14525 PF01380 SIS domain L1B16_14530 PF01979 Amidohydrolase family L1B16_14545 PF12627 Probable RNA and SrmB- binding site of polymerase A L1B16_14545 PF01966 HD domain L1B16_14545 PF01743 Poly A polymerase head domain L1B16_14550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain L1B16_14550 PF01464 Transglycosylase SLT domain L1B16_14555 PF07715 TonB-dependent Receptor Plug Domain L1B16_14555 PF00593 TonB dependent receptor L1B16_14560 PF05199 GMC oxidoreductase L1B16_14560 PF00732 GMC oxidoreductase L1B16_14565 PF00171 Aldehyde dehydrogenase family L1B16_14570 PF02028 BCCT, betaine/carnitine/choline family transporter L1B16_14580 PF01323 DSBA-like thioredoxin domain L1B16_14585 PF01323 DSBA-like thioredoxin domain L1B16_14590 PF00034 Cytochrome c L1B16_14595 PF01926 50S ribosome-binding GTPase L1B16_14600 PF10996 Beta-Casp domain L1B16_14600 PF00753 Metallo-beta-lactamase superfamily L1B16_14600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L1B16_14605 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term L1B16_14605 PF12833 Helix-turn-helix domain L1B16_14610 PF04107 Glutamate-cysteine ligase family 2(GCS2) L1B16_14615 PF00512 His Kinase A (phospho-acceptor) domain L1B16_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_14615 PF00672 HAMP domain L1B16_14620 PF00072 Response regulator receiver domain L1B16_14620 PF00486 Transcriptional regulatory protein, C terminal L1B16_14635 PF13581 Histidine kinase-like ATPase domain L1B16_14635 PF07536 HWE histidine kinase L1B16_14635 PF13426 PAS domain L1B16_14640 PF02583 Metal-sensitive transcriptional repressor L1B16_14645 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_14645 PF00107 Zinc-binding dehydrogenase L1B16_14650 PF04828 Glutathione-dependent formaldehyde-activating enzyme L1B16_14655 PF00756 Putative esterase L1B16_14660 PF00155 Aminotransferase class I and II L1B16_14660 PF00392 Bacterial regulatory proteins, gntR family L1B16_14665 PF02567 Phenazine biosynthesis-like protein L1B16_14670 PF00892 EamA-like transporter family L1B16_14690 PF03814 Potassium-transporting ATPase A subunit L1B16_14700 PF02669 K+-transporting ATPase, c chain L1B16_14705 PF13493 Domain of unknown function (DUF4118) L1B16_14705 PF13492 GAF domain L1B16_14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_14705 PF00512 His Kinase A (phospho-acceptor) domain L1B16_14705 PF02702 Osmosensitive K+ channel His kinase sensor domain L1B16_14710 PF00072 Response regulator receiver domain L1B16_14710 PF00486 Transcriptional regulatory protein, C terminal L1B16_14715 PF07676 WD40-like Beta Propeller Repeat L1B16_14715 PF00326 Prolyl oligopeptidase family L1B16_14720 PF01565 FAD binding domain L1B16_14720 PF02913 FAD linked oxidases, C-terminal domain L1B16_14725 PF04307 LexA-binding, inner membrane-associated putative hydrolase L1B16_14730 PF02021 Uncharacterised protein family UPF0102 L1B16_14740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1B16_14755 PF02381 MraZ protein, putative antitoxin-like L1B16_14760 PF01795 MraW methylase family L1B16_14765 PF04999 Cell division protein FtsL L1B16_14770 PF03717 Penicillin-binding Protein dimerisation domain L1B16_14770 PF00905 Penicillin binding protein transpeptidase domain L1B16_14775 PF08245 Mur ligase middle domain L1B16_14775 PF01225 Mur ligase family, catalytic domain L1B16_14775 PF02875 Mur ligase family, glutamate ligase domain L1B16_14780 PF02875 Mur ligase family, glutamate ligase domain L1B16_14780 PF01225 Mur ligase family, catalytic domain L1B16_14780 PF08245 Mur ligase middle domain L1B16_14785 PF00953 Glycosyl transferase family 4 L1B16_14790 PF01098 Cell cycle protein L1B16_14795 PF04101 Glycosyltransferase family 28 C-terminal domain L1B16_14795 PF03033 Glycosyltransferase family 28 N-terminal domain L1B16_14800 PF08245 Mur ligase middle domain L1B16_14800 PF02875 Mur ligase family, glutamate ligase domain L1B16_14800 PF01225 Mur ligase family, catalytic domain L1B16_14805 PF01820 D-ala D-ala ligase N-terminus L1B16_14805 PF07478 D-ala D-ala ligase C-terminus L1B16_14810 PF08478 POTRA domain, FtsQ-type L1B16_14810 PF03799 Cell division protein FtsQ L1B16_14815 PF02491 SHS2 domain inserted in FTSA L1B16_14820 PF12327 FtsZ family, C-terminal domain L1B16_14820 PF00091 Tubulin/FtsZ family, GTPase domain L1B16_14825 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase L1B16_14835 PF01551 Peptidase family M23 L1B16_14835 PF01476 LysM domain L1B16_14835 PF08525 Opacity-associated protein A N-terminal motif L1B16_14840 PF02810 SEC-C motif L1B16_14840 PF07516 SecA Wing and Scaffold domain L1B16_14840 PF01043 SecA preprotein cross-linking domain L1B16_14840 PF07517 SecA DEAD-like domain L1B16_14850 PF00293 NUDIX domain L1B16_14865 PF02219 Methylenetetrahydrofolate reductase L1B16_14870 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_14870 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_14870 PF00698 Acyl transferase domain L1B16_14870 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_14870 PF00550 Phosphopantetheine attachment site L1B16_14870 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_14870 PF00107 Zinc-binding dehydrogenase L1B16_14870 PF14765 Polyketide synthase dehydratase L1B16_14870 PF08659 KR domain L1B16_14875 PF09286 Pro-kumamolisin, activation domain L1B16_14875 PF00082 Subtilase family L1B16_14885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1B16_14890 PF00128 Alpha amylase, catalytic domain L1B16_14915 PF13649 Methyltransferase domain L1B16_14920 PF05221 S-adenosyl-L-homocysteine hydrolase L1B16_14920 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain L1B16_14930 PF00311 Phosphoenolpyruvate carboxylase L1B16_14955 PF00328 Histidine phosphatase superfamily (branch 2) L1B16_14960 PF02773 S-adenosylmethionine synthetase, C-terminal domain L1B16_14960 PF00438 S-adenosylmethionine synthetase, N-terminal domain L1B16_14960 PF02772 S-adenosylmethionine synthetase, central domain L1B16_14975 PF13649 Methyltransferase domain L1B16_14980 PF01207 Dihydrouridine synthase (Dus) L1B16_14985 PF00294 pfkB family carbohydrate kinase L1B16_14985 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L1B16_14990 PF01773 Na+ dependent nucleoside transporter N-terminus L1B16_14990 PF07662 Na+ dependent nucleoside transporter C-terminus L1B16_14990 PF07670 Nucleoside recognition L1B16_14995 PF00248 Aldo/keto reductase family L1B16_15005 PF07715 TonB-dependent Receptor Plug Domain L1B16_15005 PF00593 TonB dependent receptor L1B16_15025 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_15030 PF00005 ABC transporter L1B16_15040 PF02668 Taurine catabolism dioxygenase TauD, TfdA family L1B16_15050 PF00005 ABC transporter L1B16_15055 PF13472 GDSL-like Lipase/Acylhydrolase family L1B16_15060 PF00072 Response regulator receiver domain L1B16_15060 PF00486 Transcriptional regulatory protein, C terminal L1B16_15065 PF08521 Two-component sensor kinase N-terminal L1B16_15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_15065 PF00512 His Kinase A (phospho-acceptor) domain L1B16_15075 PF01219 Prokaryotic diacylglycerol kinase L1B16_15095 PF01790 Prolipoprotein diacylglyceryl transferase L1B16_15100 PF00303 Thymidylate synthase L1B16_15105 PF00186 Dihydrofolate reductase L1B16_15110 PF00149 Calcineurin-like phosphoesterase L1B16_15115 PF04379 ApaG domain L1B16_15120 PF00398 Ribosomal RNA adenine dimethylase L1B16_15125 PF04166 Pyridoxal phosphate biosynthetic protein PdxA L1B16_15130 PF00639 PPIC-type PPIASE domain L1B16_15130 PF09312 SurA N-terminal domain L1B16_15135 PF04453 LPS transport system D L1B16_15135 PF03968 OstA-like protein L1B16_15140 PF00850 Histone deacetylase domain L1B16_15145 PF01923 Cobalamin adenosyltransferase L1B16_15155 PF01494 FAD binding domain L1B16_15160 PF01494 FAD binding domain L1B16_15180 PF07729 FCD domain L1B16_15180 PF00392 Bacterial regulatory proteins, gntR family L1B16_15185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L1B16_15190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L1B16_15190 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit L1B16_15195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_15195 PF03466 LysR substrate binding domain L1B16_15200 PF13193 AMP-binding enzyme C-terminal domain L1B16_15200 PF00501 AMP-binding enzyme L1B16_15205 PF00171 Aldehyde dehydrogenase family L1B16_15210 PF00378 Enoyl-CoA hydratase/isomerase L1B16_15235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1B16_15235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L1B16_15240 PF18125 RlmM ferredoxin-like domain L1B16_15240 PF01728 FtsJ-like methyltransferase L1B16_15260 PF00892 EamA-like transporter family L1B16_15265 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1B16_15265 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain L1B16_15280 PF00990 Diguanylate cyclase, GGDEF domain L1B16_15280 PF00072 Response regulator receiver domain L1B16_15285 PF17149 Periplasmic sensor domain found in signal transduction proteins L1B16_15285 PF00672 HAMP domain L1B16_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_15285 PF00512 His Kinase A (phospho-acceptor) domain L1B16_15285 PF01627 Hpt domain L1B16_15285 PF00072 Response regulator receiver domain L1B16_15290 PF00196 Bacterial regulatory proteins, luxR family L1B16_15290 PF00072 Response regulator receiver domain L1B16_15300 PF01625 Peptide methionine sulfoxide reductase L1B16_15310 PF00923 Transaldolase/Fructose-6-phosphate aldolase L1B16_15315 PF14760 Rnk N-terminus L1B16_15315 PF01272 Transcription elongation factor, GreA/GreB, C-term L1B16_15320 PF03466 LysR substrate binding domain L1B16_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_15325 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_15325 PF13192 Thioredoxin domain L1B16_15330 PF10417 C-terminal domain of 1-Cys peroxiredoxin L1B16_15330 PF00578 AhpC/TSA family L1B16_15335 PF17827 PrmC N-terminal domain L1B16_15335 PF05175 Methyltransferase small domain L1B16_15340 PF00561 alpha/beta hydrolase fold L1B16_15350 PF00293 NUDIX domain L1B16_15355 PF01367 5'-3' exonuclease, C-terminal SAM fold L1B16_15355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1B16_15355 PF00476 DNA polymerase family A L1B16_15355 PF01612 3'-5' exonuclease L1B16_15385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch L1B16_15385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L1B16_15385 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L1B16_15405 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch L1B16_15410 PF02233 NAD(P) transhydrogenase beta subunit L1B16_15430 PF01063 Amino-transferase class IV L1B16_15435 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_15435 PF00082 Subtilase family L1B16_15440 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_15440 PF00082 Subtilase family L1B16_15445 PF04151 Bacterial pre-peptidase C-terminal domain L1B16_15445 PF00082 Subtilase family L1B16_15450 PF04073 Aminoacyl-tRNA editing domain L1B16_15465 PF03358 NADPH-dependent FMN reductase L1B16_15470 PF03631 Virulence factor BrkB L1B16_15475 PF08534 Redoxin L1B16_15480 PF00708 Acylphosphatase L1B16_15490 PF03976 Polyphosphate kinase 2 (PPK2) L1B16_15495 PF00994 Probable molybdopterin binding domain L1B16_15505 PF00472 RF-1 domain L1B16_15505 PF03462 PCRF domain L1B16_15510 PF01488 Shikimate / quinate 5-dehydrogenase L1B16_15510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain L1B16_15510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain L1B16_15520 PF03550 Outer membrane lipoprotein LolB L1B16_15525 PF08544 GHMP kinases C terminal L1B16_15525 PF00288 GHMP kinases N terminal domain L1B16_15535 PF14572 Phosphoribosyl synthetase-associated domain L1B16_15535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L1B16_15540 PF01386 Ribosomal L25p family L1B16_15540 PF14693 Ribosomal protein TL5, C-terminal domain L1B16_15545 PF01195 Peptidyl-tRNA hydrolase L1B16_15550 PF01926 50S ribosome-binding GTPase L1B16_15550 PF06071 Protein of unknown function (DUF933) L1B16_15570 PF03144 Elongation factor Tu domain 2 L1B16_15570 PF03143 Elongation factor Tu C-terminal domain L1B16_15570 PF00009 Elongation factor Tu GTP binding domain L1B16_15580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex L1B16_15585 PF00467 KOW motif L1B16_15585 PF02357 Transcription termination factor nusG L1B16_15590 PF00298 Ribosomal protein L11, RNA binding domain L1B16_15590 PF03946 Ribosomal protein L11, N-terminal domain L1B16_15595 PF00687 Ribosomal protein L1p/L10e family L1B16_15600 PF00466 Ribosomal protein L10 L1B16_15605 PF00542 Ribosomal protein L7/L12 C-terminal domain L1B16_15605 PF16320 Ribosomal protein L7/L12 dimerisation domain L1B16_15610 PF04560 RNA polymerase Rpb2, domain 7 L1B16_15610 PF00562 RNA polymerase Rpb2, domain 6 L1B16_15610 PF10385 RNA polymerase beta subunit external 1 domain L1B16_15610 PF04561 RNA polymerase Rpb2, domain 2 L1B16_15610 PF04563 RNA polymerase beta subunit L1B16_15610 PF04565 RNA polymerase Rpb2, domain 3 L1B16_15615 PF04997 RNA polymerase Rpb1, domain 1 L1B16_15615 PF00623 RNA polymerase Rpb1, domain 2 L1B16_15615 PF04983 RNA polymerase Rpb1, domain 3 L1B16_15615 PF05000 RNA polymerase Rpb1, domain 4 L1B16_15615 PF04998 RNA polymerase Rpb1, domain 5 L1B16_15620 PF00164 Ribosomal protein S12/S23 L1B16_15625 PF00177 Ribosomal protein S7p/S5e L1B16_15630 PF00679 Elongation factor G C-terminus L1B16_15630 PF14492 Elongation Factor G, domain II L1B16_15630 PF03764 Elongation factor G, domain IV L1B16_15630 PF03144 Elongation factor Tu domain 2 L1B16_15630 PF00009 Elongation factor Tu GTP binding domain L1B16_15635 PF00009 Elongation factor Tu GTP binding domain L1B16_15635 PF03144 Elongation factor Tu domain 2 L1B16_15635 PF03143 Elongation factor Tu C-terminal domain L1B16_15640 PF00338 Ribosomal protein S10p/S20e L1B16_15645 PF00297 Ribosomal protein L3 L1B16_15650 PF00573 Ribosomal protein L4/L1 family L1B16_15655 PF00276 Ribosomal protein L23 L1B16_15660 PF00181 Ribosomal Proteins L2, RNA binding domain L1B16_15660 PF03947 Ribosomal Proteins L2, C-terminal domain L1B16_15665 PF00203 Ribosomal protein S19 L1B16_15670 PF00237 Ribosomal protein L22p/L17e L1B16_15675 PF00189 Ribosomal protein S3, C-terminal domain L1B16_15675 PF07650 KH domain L1B16_15680 PF00252 Ribosomal protein L16p/L10e L1B16_15685 PF00831 Ribosomal L29 protein L1B16_15690 PF00366 Ribosomal protein S17 L1B16_15695 PF00238 Ribosomal protein L14p/L23e L1B16_15700 PF00467 KOW motif L1B16_15700 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L1B16_15705 PF00281 Ribosomal protein L5 L1B16_15705 PF00673 ribosomal L5P family C-terminus L1B16_15710 PF00253 Ribosomal protein S14p/S29e L1B16_15715 PF00410 Ribosomal protein S8 L1B16_15720 PF00347 Ribosomal protein L6 L1B16_15725 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L1B16_15730 PF03719 Ribosomal protein S5, C-terminal domain L1B16_15730 PF00333 Ribosomal protein S5, N-terminal domain L1B16_15735 PF00327 Ribosomal protein L30p/L7e L1B16_15740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L1B16_15745 PF00344 SecY translocase L1B16_15750 PF00416 Ribosomal protein S13/S18 L1B16_15755 PF00411 Ribosomal protein S11 L1B16_15760 PF00163 Ribosomal protein S4/S9 N-terminal domain L1B16_15760 PF01479 S4 domain L1B16_15765 PF01000 RNA polymerase Rpb3/RpoA insert domain L1B16_15765 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L1B16_15765 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L1B16_15770 PF01196 Ribosomal protein L17 L1B16_15775 PF02600 Disulfide bond formation protein DsbB L1B16_15780 PF01474 Class-II DAHP synthetase family L1B16_15790 PF01425 Amidase L1B16_15800 PF03144 Elongation factor Tu domain 2 L1B16_15800 PF00009 Elongation factor Tu GTP binding domain L1B16_15800 PF00679 Elongation factor G C-terminus L1B16_15805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L1B16_15810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L1B16_15810 PF00056 lactate/malate dehydrogenase, NAD binding domain L1B16_15815 PF00043 Glutathione S-transferase, C-terminal domain L1B16_15815 PF02798 Glutathione S-transferase, N-terminal domain L1B16_15830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1B16_15830 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_15835 PF00107 Zinc-binding dehydrogenase L1B16_15835 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_15840 PF00691 OmpA family L1B16_15840 PF00223 Photosystem I psaA/psaB protein L1B16_15850 PF00849 RNA pseudouridylate synthase L1B16_15860 PF00155 Aminotransferase class I and II L1B16_15870 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_15875 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_15880 PF12857 TOBE-like domain L1B16_15880 PF00005 ABC transporter L1B16_15880 PF17850 CysA C-terminal regulatory domain L1B16_15890 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_15890 PF00107 Zinc-binding dehydrogenase L1B16_15900 PF05506 Domain of unknown function (DUF756) L1B16_15900 PF04185 Phosphoesterase family L1B16_15910 PF00300 Histidine phosphatase superfamily (branch 1) L1B16_15920 PF02875 Mur ligase family, glutamate ligase domain L1B16_15920 PF08245 Mur ligase middle domain L1B16_15935 PF00156 Phosphoribosyl transferase domain L1B16_15940 PF04305 Protein of unknown function (DUF455) L1B16_15955 PF00149 Calcineurin-like phosphoesterase L1B16_15960 PF01569 PAP2 superfamily L1B16_15965 PF13439 Glycosyltransferase Family 4 L1B16_15965 PF00534 Glycosyl transferases group 1 L1B16_15970 PF02541 Ppx/GppA phosphatase family L1B16_15975 PF02503 Polyphosphate kinase middle domain L1B16_15975 PF13090 Polyphosphate kinase C-terminal domain 2 L1B16_15975 PF17941 Polyphosphate kinase C-terminal domain 1 L1B16_15975 PF13089 Polyphosphate kinase N-terminal domain L1B16_15980 PF00512 His Kinase A (phospho-acceptor) domain L1B16_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_15980 PF11808 Phosphate regulon sensor protein PhoR L1B16_15980 PF00989 PAS fold L1B16_15985 PF00486 Transcriptional regulatory protein, C terminal L1B16_15985 PF00072 Response regulator receiver domain L1B16_15990 PF01435 Peptidase family M48 L1B16_15990 PF13181 Tetratricopeptide repeat L1B16_15995 PF00462 Glutaredoxin L1B16_16005 PF00180 Isocitrate/isopropylmalate dehydrogenase L1B16_16005 PF18324 Hypothetical protein TT1725 L1B16_16040 PF13426 PAS domain L1B16_16040 PF00072 Response regulator receiver domain L1B16_16040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_16050 PF05698 Bacterial trigger factor protein (TF) C-terminus L1B16_16050 PF05697 Bacterial trigger factor protein (TF) L1B16_16055 PF00574 Clp protease L1B16_16060 PF06689 ClpX C4-type zinc finger L1B16_16060 PF07724 AAA domain (Cdc48 subfamily) L1B16_16060 PF10431 C-terminal, D2-small domain, of ClpB protein L1B16_16065 PF02190 ATP-dependent protease La (LON) substrate-binding domain L1B16_16065 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_16065 PF05362 Lon protease (S16) C-terminal proteolytic domain L1B16_16070 PF00216 Bacterial DNA-binding protein L1B16_16095 PF05257 CHAP domain L1B16_16095 PF01476 LysM domain L1B16_16100 PF16123 Hydroxyacylglutathione hydrolase C-terminus L1B16_16100 PF00753 Metallo-beta-lactamase superfamily L1B16_16110 PF00075 RNase H L1B16_16115 PF00929 Exonuclease L1B16_16135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) L1B16_16145 PF00753 Metallo-beta-lactamase superfamily L1B16_16145 PF12706 Beta-lactamase superfamily domain L1B16_16150 PF06463 Molybdenum Cofactor Synthesis C L1B16_16150 PF04055 Radical SAM superfamily L1B16_16155 PF01967 MoaC family L1B16_16160 PF02597 ThiS family L1B16_16165 PF02391 MoaE protein L1B16_16180 PF12170 DNA polymerase III tau subunit V interacting with alpha L1B16_16180 PF12169 DNA polymerase III subunits gamma and tau domain III L1B16_16180 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding L1B16_16185 PF02575 YbaB/EbfC DNA-binding family L1B16_16190 PF02132 RecR protein L1B16_16190 PF13662 Toprim domain L1B16_16195 PF01230 HIT domain L1B16_16205 PF11992 Domain of unknown function (DUF3488) L1B16_16205 PF13559 Domain of unknown function (DUF4129) L1B16_16205 PF01841 Transglutaminase-like superfamily L1B16_16215 PF07726 ATPase family associated with various cellular activities (AAA) L1B16_16215 PF17863 AAA lid domain L1B16_16235 PF02545 Maf-like protein L1B16_16240 PF02620 Large ribosomal RNA subunit accumulation protein YceD L1B16_16245 PF01783 Ribosomal L32p protein family L1B16_16250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1B16_16250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1B16_16260 PF00698 Acyl transferase domain L1B16_16270 PF00550 Phosphopantetheine attachment site L1B16_16275 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_16275 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_16280 PF00425 chorismate binding enzyme L1B16_16280 PF04715 Anthranilate synthase component I, N terminal region L1B16_16285 PF02618 YceG-like family L1B16_16290 PF09115 DNA polymerase III, delta subunit, C terminal L1B16_16310 PF02954 Bacterial regulatory protein, Fis family L1B16_16310 PF06506 Propionate catabolism activator L1B16_16310 PF00158 Sigma-54 interaction domain L1B16_16320 PF00285 Citrate synthase, C-terminal domain L1B16_16325 PF00694 Aconitase C-terminal domain L1B16_16325 PF00330 Aconitase family (aconitate hydratase) L1B16_16330 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH L1B16_16340 PF04303 PrpF protein L1B16_16345 PF00593 TonB dependent receptor L1B16_16345 PF07715 TonB-dependent Receptor Plug Domain L1B16_16385 PF06832 Penicillin-Binding Protein C-terminus Family L1B16_16385 PF00912 Transglycosylase L1B16_16385 PF00905 Penicillin binding protein transpeptidase domain L1B16_16395 PF08534 Redoxin L1B16_16405 PF00226 DnaJ domain L1B16_16405 PF01556 DnaJ C terminal domain L1B16_16410 PF00072 Response regulator receiver domain L1B16_16415 PF01145 SPFH domain / Band 7 family L1B16_16415 PF12221 Bacterial membrane protein N terminal L1B16_16420 PF01145 SPFH domain / Band 7 family L1B16_16435 PF00709 Adenylosuccinate synthetase L1B16_16440 PF01433 Peptidase family M1 domain L1B16_16440 PF11838 ERAP1-like C-terminal domain L1B16_16460 PF00440 Bacterial regulatory proteins, tetR family L1B16_16505 PF13977 BetI-type transcriptional repressor, C-terminal L1B16_16505 PF00440 Bacterial regulatory proteins, tetR family L1B16_16510 PF00300 Histidine phosphatase superfamily (branch 1) L1B16_16510 PF13456 Reverse transcriptase-like L1B16_16515 PF01256 Carbohydrate kinase L1B16_16535 PF07971 Glycosyl hydrolase family 92 L1B16_16535 PF17678 Glycosyl hydrolase family 92 N-terminal domain L1B16_16545 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_16565 PF17755 UvrA DNA-binding domain L1B16_16570 PF14310 Fibronectin type III-like domain L1B16_16570 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_16570 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_16575 PF04239 Protein of unknown function (DUF421) L1B16_16590 PF07690 Major Facilitator Superfamily L1B16_16595 PF05426 Alginate lyase L1B16_16595 PF07940 Heparinase II/III-like protein L1B16_16600 PF14592 Chondroitinase B L1B16_16610 PF07729 FCD domain L1B16_16610 PF00392 Bacterial regulatory proteins, gntR family L1B16_16615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L1B16_16615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L1B16_16620 PF00941 FAD binding domain in molybdopterin dehydrogenase L1B16_16620 PF03450 CO dehydrogenase flavoprotein C-terminal domain L1B16_16625 PF01799 [2Fe-2S] binding domain L1B16_16625 PF00111 2Fe-2S iron-sulfur cluster binding domain L1B16_16625 PF10518 TAT (twin-arginine translocation) pathway signal sequence L1B16_16630 PF08281 Sigma-70, region 4 L1B16_16630 PF04542 Sigma-70 region 2 L1B16_16645 PF00328 Histidine phosphatase superfamily (branch 2) L1B16_16670 PF00717 Peptidase S24-like L1B16_16670 PF01726 LexA DNA binding domain L1B16_16685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L1B16_16685 PF07733 Bacterial DNA polymerase III alpha NTPase domain L1B16_16685 PF14579 Helix-hairpin-helix motif L1B16_16685 PF02811 PHP domain L1B16_16695 PF03169 OPT oligopeptide transporter protein L1B16_16705 PF01011 PQQ enzyme repeat L1B16_16710 PF04966 Carbohydrate-selective porin, OprB family L1B16_16715 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region L1B16_16715 PF00326 Prolyl oligopeptidase family L1B16_16715 PF07676 WD40-like Beta Propeller Repeat L1B16_16730 PF12833 Helix-turn-helix domain L1B16_16730 PF02311 AraC-like ligand binding domain L1B16_16740 PF00664 ABC transporter transmembrane region L1B16_16740 PF00005 ABC transporter L1B16_16740 PF03412 Peptidase C39 family L1B16_16770 PF00199 Catalase L1B16_16770 PF06628 Catalase-related immune-responsive L1B16_16770 PF18011 C-terminal domain found in long catalases L1B16_16775 PF00248 Aldo/keto reductase family L1B16_16780 PF00135 Carboxylesterase family L1B16_16785 PF02347 Glycine cleavage system P-protein L1B16_16815 PF00884 Sulfatase L1B16_16815 PF08019 Phosphoethanolamine transferase EptA/EptB L1B16_16825 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase L1B16_16830 PF00486 Transcriptional regulatory protein, C terminal L1B16_16830 PF00072 Response regulator receiver domain L1B16_16835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_16835 PF00512 His Kinase A (phospho-acceptor) domain L1B16_16840 PF01261 Xylose isomerase-like TIM barrel L1B16_16840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1B16_16850 PF03776 Septum formation topological specificity factor MinE L1B16_16855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L1B16_16860 PF05209 Septum formation inhibitor MinC, N-terminal domain L1B16_16860 PF03775 Septum formation inhibitor MinC, C-terminal domain L1B16_16870 PF07730 Histidine kinase L1B16_16875 PF00072 Response regulator receiver domain L1B16_16875 PF00196 Bacterial regulatory proteins, luxR family L1B16_16890 PF00730 HhH-GPD superfamily base excision DNA repair protein L1B16_16915 PF01370 NAD dependent epimerase/dehydratase family L1B16_16915 PF02222 ATP-grasp domain L1B16_16925 PF04377 Arginine-tRNA-protein transferase, C terminus L1B16_16925 PF04376 Arginine-tRNA-protein transferase, N terminus L1B16_16935 PF08281 Sigma-70, region 4 L1B16_16935 PF04542 Sigma-70 region 2 L1B16_16950 PF00378 Enoyl-CoA hydratase/isomerase L1B16_16965 PF00005 ABC transporter L1B16_16965 PF17755 UvrA DNA-binding domain L1B16_16965 PF17760 UvrA interaction domain L1B16_16970 PF00829 Ribosomal prokaryotic L21 protein L1B16_16975 PF01016 Ribosomal L27 protein L1B16_16980 PF01018 GTP1/OBG L1B16_16980 PF01926 50S ribosome-binding GTPase L1B16_16985 PF01649 Ribosomal protein S20 L1B16_16990 PF03023 Lipid II flippase MurJ L1B16_16995 PF06574 FAD synthetase L1B16_16995 PF01687 Riboflavin kinase L1B16_17000 PF06827 Zinc finger found in FPG and IleRS L1B16_17000 PF00133 tRNA synthetases class I (I, L, M and V) L1B16_17000 PF08264 Anticodon-binding domain of tRNA L1B16_17005 PF01252 Signal peptidase (SPase) II L1B16_17010 PF02401 LytB protein L1B16_17020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L1B16_17020 PF06481 COX Aromatic Rich Motif L1B16_17025 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1B16_17030 PF00510 Cytochrome c oxidase subunit III L1B16_17035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L1B16_17045 PF18073 Rubredoxin metal binding domain L1B16_17050 PF05656 Protein of unknown function (DUF805) L1B16_17060 PF12833 Helix-turn-helix domain L1B16_17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17065 PF00183 Hsp90 protein L1B16_17075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1B16_17080 PF08678 Rsbr N terminal L1B16_17080 PF01740 STAS domain L1B16_17085 PF01740 STAS domain L1B16_17090 PF13581 Histidine kinase-like ATPase domain L1B16_17100 PF00672 HAMP domain L1B16_17100 PF01627 Hpt domain L1B16_17100 PF00512 His Kinase A (phospho-acceptor) domain L1B16_17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17100 PF17149 Periplasmic sensor domain found in signal transduction proteins L1B16_17100 PF00072 Response regulator receiver domain L1B16_17105 PF00072 Response regulator receiver domain L1B16_17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17105 PF00512 His Kinase A (phospho-acceptor) domain L1B16_17105 PF08448 PAS fold L1B16_17105 PF13188 PAS domain L1B16_17110 PF04616 Glycosyl hydrolases family 43 L1B16_17110 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L1B16_17120 PF07715 TonB-dependent Receptor Plug Domain L1B16_17120 PF00593 TonB dependent receptor L1B16_17125 PF00085 Thioredoxin L1B16_17130 PF07237 Protein of unknown function (DUF1428) L1B16_17135 PF00512 His Kinase A (phospho-acceptor) domain L1B16_17135 PF02702 Osmosensitive K+ channel His kinase sensor domain L1B16_17135 PF13493 Domain of unknown function (DUF4118) L1B16_17135 PF13492 GAF domain L1B16_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17140 PF01339 CheB methylesterase L1B16_17145 PF01739 CheR methyltransferase, SAM binding domain L1B16_17145 PF03705 CheR methyltransferase, all-alpha domain L1B16_17150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1B16_17150 PF00672 HAMP domain L1B16_17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17150 PF00512 His Kinase A (phospho-acceptor) domain L1B16_17150 PF01627 Hpt domain L1B16_17150 PF00072 Response regulator receiver domain L1B16_17155 PF00072 Response regulator receiver domain L1B16_17155 PF13426 PAS domain L1B16_17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_17160 PF00072 Response regulator receiver domain L1B16_17185 PF03466 LysR substrate binding domain L1B16_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_17190 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L1B16_17195 PF01263 Aldose 1-epimerase L1B16_17205 PF00448 SRP54-type protein, GTPase domain L1B16_17205 PF02881 SRP54-type protein, helical bundle domain L1B16_17205 PF02978 Signal peptide binding domain L1B16_17210 PF03060 Nitronate monooxygenase L1B16_17220 PF00886 Ribosomal protein S16 L1B16_17225 PF05239 PRC-barrel domain L1B16_17225 PF01782 RimM N-terminal domain L1B16_17230 PF01746 tRNA (Guanine-1)-methyltransferase L1B16_17235 PF01245 Ribosomal protein L19 L1B16_17260 PF00141 Peroxidase L1B16_17270 PF00488 MutS domain V L1B16_17270 PF05190 MutS family domain IV L1B16_17270 PF05192 MutS domain III L1B16_17270 PF05188 MutS domain II L1B16_17270 PF01624 MutS domain I L1B16_17320 PF05593 RHS Repeat L1B16_17320 PF03527 RHS protein L1B16_17390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_17390 PF00672 HAMP domain L1B16_17390 PF02203 Tar ligand binding domain homologue L1B16_17410 PF01638 HxlR-like helix-turn-helix L1B16_17415 PF07690 Major Facilitator Superfamily L1B16_17435 PF04002 RadC-like JAB domain L1B16_17495 PF02929 Beta galactosidase small chain L1B16_17495 PF16353 Domain of unknown function(DUF4981) L1B16_17495 PF00703 Glycosyl hydrolases family 2 L1B16_17495 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L1B16_17495 PF02837 Glycosyl hydrolases family 2, sugar binding domain L1B16_17500 PF07745 Glycosyl hydrolase family 53 L1B16_17510 PF01381 Helix-turn-helix L1B16_17510 PF06114 IrrE N-terminal-like domain L1B16_17510 PF09856 Predicted transcriptional regulator (DUF2083) L1B16_17515 PF00171 Aldehyde dehydrogenase family L1B16_17520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_17520 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_17520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_17525 PF00378 Enoyl-CoA hydratase/isomerase L1B16_17530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L1B16_17530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L1B16_17530 PF00378 Enoyl-CoA hydratase/isomerase L1B16_17535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L1B16_17535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L1B16_17540 PF01545 Cation efflux family L1B16_17545 PF00378 Enoyl-CoA hydratase/isomerase L1B16_17545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L1B16_17545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L1B16_17550 PF08281 Sigma-70, region 4 L1B16_17550 PF04542 Sigma-70 region 2 L1B16_17560 PF13180 PDZ domain L1B16_17565 PF00679 Elongation factor G C-terminus L1B16_17565 PF00009 Elongation factor Tu GTP binding domain L1B16_17565 PF03144 Elongation factor Tu domain 2 L1B16_17565 PF06421 GTP-binding protein LepA C-terminus L1B16_17570 PF10502 Signal peptidase, peptidase S26 L1B16_17580 PF00035 Double-stranded RNA binding motif L1B16_17580 PF14622 Ribonuclease-III-like L1B16_17585 PF07650 KH domain L1B16_17585 PF01926 50S ribosome-binding GTPase L1B16_17590 PF02565 Recombination protein O C terminal L1B16_17590 PF11967 Recombination protein O N terminal L1B16_17600 PF05958 tRNA (Uracil-5-)-methyltransferase L1B16_17605 PF01928 CYTH domain L1B16_17610 PF01323 DSBA-like thioredoxin domain L1B16_17615 PF01593 Flavin containing amine oxidoreductase L1B16_17620 PF04244 Deoxyribodipyrimidine photo-lyase-related protein L1B16_17625 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_17630 PF00156 Phosphoribosyl transferase domain L1B16_17635 PF01048 Phosphorylase superfamily L1B16_17640 PF00313 'Cold-shock' DNA-binding domain L1B16_17645 PF01494 FAD binding domain L1B16_17655 PF08494 DEAD/H associated L1B16_17655 PF00270 DEAD/DEAH box helicase L1B16_17655 PF00271 Helicase conserved C-terminal domain L1B16_17660 PF04675 DNA ligase N terminus L1B16_17660 PF01068 ATP dependent DNA ligase domain L1B16_17660 PF04679 ATP dependent DNA ligase C terminal region L1B16_17670 PF04679 ATP dependent DNA ligase C terminal region L1B16_17670 PF01068 ATP dependent DNA ligase domain L1B16_17670 PF04675 DNA ligase N terminus L1B16_17685 PF00990 Diguanylate cyclase, GGDEF domain L1B16_17685 PF00072 Response regulator receiver domain L1B16_17700 PF02803 Thiolase, C-terminal domain L1B16_17700 PF00108 Thiolase, N-terminal domain L1B16_17705 PF00082 Subtilase family L1B16_17705 PF03797 Autotransporter beta-domain L1B16_17705 PF12951 Passenger-associated-transport-repeat L1B16_17710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L1B16_17710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L1B16_17720 PF01863 Protein of unknown function DUF45 L1B16_17725 PF07043 Protein of unknown function (DUF1328) L1B16_17735 PF01258 Prokaryotic dksA/traR C4-type zinc finger L1B16_17755 PF04542 Sigma-70 region 2 L1B16_17755 PF08281 Sigma-70, region 4 L1B16_17780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1B16_17790 PF03831 PhnA domain L1B16_17790 PF08274 PhnA Zinc-Ribbon L1B16_17810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1B16_17815 PF07690 Major Facilitator Superfamily L1B16_17855 PF09924 Uncharacterised conserved protein (DUF2156) L1B16_17855 PF03706 Lysylphosphatidylglycerol synthase TM region L1B16_17865 PF01042 Endoribonuclease L-PSP L1B16_17910 PF04542 Sigma-70 region 2 L1B16_17910 PF04545 Sigma-70, region 4 L1B16_17925 PF04060 Putative Fe-S cluster L1B16_17935 PF09334 tRNA synthetases class I (M) L1B16_17935 PF01588 Putative tRNA binding domain L1B16_17955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1B16_17975 PF00324 Amino acid permease L1B16_17980 PF02574 Homocysteine S-methyltransferase L1B16_17995 PF01810 LysE type translocator L1B16_18000 PF02592 Putative vitamin uptake transporter L1B16_18020 PF03551 Transcriptional regulator PadR-like family L1B16_18040 PF03653 Uncharacterised protein family (UPF0093) L1B16_18050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L1B16_18055 PF07733 Bacterial DNA polymerase III alpha NTPase domain L1B16_18055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L1B16_18055 PF14579 Helix-hairpin-helix motif L1B16_18055 PF02811 PHP domain L1B16_18055 PF01336 OB-fold nucleic acid binding domain L1B16_18060 PF01351 Ribonuclease HII L1B16_18065 PF02684 Lipid-A-disaccharide synthetase L1B16_18070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 L1B16_18070 PF00132 Bacterial transferase hexapeptide (six repeats) L1B16_18075 PF07977 FabA-like domain L1B16_18080 PF00132 Bacterial transferase hexapeptide (six repeats) L1B16_18080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD L1B16_18090 PF01103 Surface antigen L1B16_18090 PF07244 Surface antigen variable number repeat L1B16_18095 PF17820 PDZ domain L1B16_18095 PF02163 Peptidase family M50 L1B16_18100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L1B16_18100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L1B16_18100 PF13288 DXP reductoisomerase C-terminal domain L1B16_18110 PF01255 Putative undecaprenyl diphosphate synthase L1B16_18115 PF01765 Ribosome recycling factor L1B16_18120 PF00696 Amino acid kinase family L1B16_18125 PF00072 Response regulator receiver domain L1B16_18125 PF00990 Diguanylate cyclase, GGDEF domain L1B16_18130 PF00889 Elongation factor TS L1B16_18135 PF00318 Ribosomal protein S2 L1B16_18165 PF05229 Spore Coat Protein U domain L1B16_18170 PF00557 Metallopeptidase family M24 L1B16_18175 PF01909 Nucleotidyltransferase domain L1B16_18175 PF01966 HD domain L1B16_18175 PF08335 GlnD PII-uridylyltransferase L1B16_18180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal L1B16_18180 PF00132 Bacterial transferase hexapeptide (six repeats) L1B16_18180 PF14602 Hexapeptide repeat of succinyl-transferase L1B16_18190 PF03960 ArsC family L1B16_18195 PF07687 Peptidase dimerisation domain L1B16_18195 PF01546 Peptidase family M20/M25/M40 L1B16_18205 PF00733 Asparagine synthase L1B16_18205 PF13537 Glutamine amidotransferase domain L1B16_18215 PF00593 TonB dependent receptor L1B16_18215 PF07715 TonB-dependent Receptor Plug Domain L1B16_18220 PF01804 Penicillin amidase L1B16_18225 PF00210 Ferritin-like domain L1B16_18230 PF05724 Thiopurine S-methyltransferase (TPMT) L1B16_18235 PF00521 DNA gyrase/topoisomerase IV, subunit A L1B16_18235 PF03989 DNA gyrase C-terminal domain, beta-propeller L1B16_18250 PF02321 Outer membrane efflux protein L1B16_18255 PF00529 HlyD membrane-fusion protein of T1SS L1B16_18255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_18260 PF07690 Major Facilitator Superfamily L1B16_18280 PF14310 Fibronectin type III-like domain L1B16_18280 PF00933 Glycosyl hydrolase family 3 N terminal domain L1B16_18280 PF01915 Glycosyl hydrolase family 3 C-terminal domain L1B16_18290 PF00854 POT family L1B16_18315 PF12802 MarR family L1B16_18320 PF01432 Peptidase family M3 L1B16_18330 PF00255 Glutathione peroxidase L1B16_18335 PF00970 Oxidoreductase FAD-binding domain L1B16_18335 PF00175 Oxidoreductase NAD-binding domain L1B16_18340 PF00005 ABC transporter L1B16_18345 PF05683 Fumarase C-terminus L1B16_18345 PF05681 Fumarate hydratase (Fumerase) L1B16_18365 PF02253 Phospholipase A1 L1B16_18375 PF00313 'Cold-shock' DNA-binding domain L1B16_18390 PF00899 ThiF family L1B16_18395 PF01026 TatD related DNase L1B16_18410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_18410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_18410 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_18420 PF13417 Glutathione S-transferase, N-terminal domain L1B16_18425 PF13537 Glutamine amidotransferase domain L1B16_18425 PF00733 Asparagine synthase L1B16_18430 PF03358 NADPH-dependent FMN reductase L1B16_18435 PF03796 DnaB-like helicase C terminal domain L1B16_18435 PF00772 DnaB-like helicase N terminal domain L1B16_18440 PF00875 DNA photolyase L1B16_18440 PF03441 FAD binding domain of DNA photolyase L1B16_18445 PF00691 OmpA family L1B16_18445 PF05736 OprF membrane domain L1B16_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_18455 PF03466 LysR substrate binding domain L1B16_18470 PF00529 HlyD membrane-fusion protein of T1SS L1B16_18470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_18475 PF00873 AcrB/AcrD/AcrF family L1B16_18480 PF00106 short chain dehydrogenase L1B16_18485 PF02321 Outer membrane efflux protein L1B16_18495 PF00990 Diguanylate cyclase, GGDEF domain L1B16_18505 PF00990 Diguanylate cyclase, GGDEF domain L1B16_18545 PF00919 Uncharacterized protein family UPF0004 L1B16_18545 PF18693 TRAM domain L1B16_18545 PF04055 Radical SAM superfamily L1B16_18550 PF03449 Transcription elongation factor, N-terminal L1B16_18550 PF01272 Transcription elongation factor, GreA/GreB, C-term L1B16_18565 PF00293 NUDIX domain L1B16_18570 PF05872 Bacterial protein of unknown function (DUF853) L1B16_18580 PF02666 Phosphatidylserine decarboxylase L1B16_18585 PF02630 SCO1/SenC L1B16_18590 PF05175 Methyltransferase small domain L1B16_18600 PF01264 Chorismate synthase L1B16_18605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1B16_18605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1B16_18610 PF02774 Semialdehyde dehydrogenase, dimerisation domain L1B16_18610 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1B16_18625 PF01416 tRNA pseudouridine synthase L1B16_18630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase L1B16_18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_18635 PF03466 LysR substrate binding domain L1B16_18640 PF00291 Pyridoxal-phosphate dependent enzyme L1B16_18650 PF00290 Tryptophan synthase alpha chain L1B16_18655 PF01039 Carboxyl transferase domain L1B16_18655 PF17848 Acetyl-coA carboxylase zinc finger domain L1B16_18660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1B16_18660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1B16_18660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1B16_18660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1B16_18675 PF00563 EAL domain L1B16_18675 PF00990 Diguanylate cyclase, GGDEF domain L1B16_18675 PF03707 Bacterial signalling protein N terminal repeat L1B16_18690 PF00106 short chain dehydrogenase L1B16_18695 PF00121 Triosephosphate isomerase L1B16_18710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L1B16_18715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L1B16_18720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L1B16_18725 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L1B16_18735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L1B16_18735 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L1B16_18735 PF10531 SLBB domain L1B16_18740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L1B16_18740 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal L1B16_18740 PF00384 Molybdopterin oxidoreductase L1B16_18745 PF00146 NADH dehydrogenase L1B16_18750 PF12838 4Fe-4S dicluster domain L1B16_18755 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L1B16_18760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L1B16_18765 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1B16_18765 PF00361 Proton-conducting membrane transporter L1B16_18770 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus L1B16_18770 PF00361 Proton-conducting membrane transporter L1B16_18775 PF00361 Proton-conducting membrane transporter L1B16_18785 PF17384 RimP C-terminal SH3 domain L1B16_18785 PF02576 RimP N-terminal domain L1B16_18790 PF13184 NusA-like KH domain L1B16_18790 PF08529 NusA N-terminal domain L1B16_18790 PF00575 S1 RNA binding domain L1B16_18795 PF11987 Translation-initiation factor 2 L1B16_18795 PF04760 Translation initiation factor IF-2, N-terminal region L1B16_18795 PF08364 Bacterial translation initiation factor IF-2 associated region L1B16_18795 PF00009 Elongation factor Tu GTP binding domain L1B16_18800 PF02033 Ribosome-binding factor A L1B16_18805 PF09157 Pseudouridine synthase II TruB, C-terminal L1B16_18805 PF16198 tRNA pseudouridylate synthase B C-terminal domain L1B16_18805 PF01509 TruB family pseudouridylate synthase (N terminal domain) L1B16_18810 PF00312 Ribosomal protein S15 L1B16_18815 PF01138 3' exoribonuclease family, domain 1 L1B16_18815 PF03725 3' exoribonuclease family, domain 2 L1B16_18815 PF00575 S1 RNA binding domain L1B16_18815 PF00013 KH domain L1B16_18815 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L1B16_18825 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L1B16_18825 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L1B16_18835 PF00731 AIR carboxylase L1B16_18840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L1B16_18840 PF02222 ATP-grasp domain L1B16_18845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L1B16_18845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L1B16_18850 PF00462 Glutaredoxin L1B16_18860 PF01914 MarC family integral membrane protein L1B16_18865 PF00593 TonB dependent receptor L1B16_18870 PF11892 Domain of unknown function (DUF3412) L1B16_18870 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases L1B16_18870 PF03641 Possible lysine decarboxylase L1B16_18875 PF07694 5TMR of 5TMR-LYT L1B16_18875 PF06580 Histidine kinase L1B16_18880 PF07963 Prokaryotic N-terminal methylation motif L1B16_18880 PF00114 Pilin (bacterial filament) L1B16_18900 PF05567 Neisseria PilC beta-propeller domain L1B16_18905 PF07963 Prokaryotic N-terminal methylation motif L1B16_18905 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor L1B16_18920 PF17757 UvrB interaction domain L1B16_18920 PF02151 UvrB/uvrC motif L1B16_18920 PF12344 Ultra-violet resistance protein B L1B16_18920 PF00271 Helicase conserved C-terminal domain L1B16_18920 PF04851 Type III restriction enzyme, res subunit L1B16_18935 PF02534 Type IV secretory system Conjugative DNA transfer L1B16_18955 PF03743 Bacterial conjugation TrbI-like protein L1B16_18960 PF00437 Type II/IV secretion system protein L1B16_18965 PF01464 Transglycosylase SLT domain L1B16_18975 PF05101 Type IV secretory pathway, VirB3-like protein L1B16_18980 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L1B16_19050 PF00239 Resolvase, N terminal domain L1B16_19050 PF02796 Helix-turn-helix domain of resolvase L1B16_19095 PF10566 Glycoside hydrolase 97 L1B16_19095 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation L1B16_19095 PF14508 Glycosyl-hydrolase 97 N-terminal L1B16_19105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L1B16_19110 PF00128 Alpha amylase, catalytic domain L1B16_19110 PF00686 Starch binding domain L1B16_19115 PF00356 Bacterial regulatory proteins, lacI family L1B16_19120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1B16_19120 PF03129 Anticodon binding domain L1B16_19120 PF02824 TGS domain L1B16_19120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1B16_19125 PF05198 Translation initiation factor IF-3, N-terminal domain L1B16_19125 PF00707 Translation initiation factor IF-3, C-terminal domain L1B16_19130 PF01632 Ribosomal protein L35 L1B16_19135 PF00453 Ribosomal protein L20 L1B16_19140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L1B16_19140 PF01409 tRNA synthetases class II core domain (F) L1B16_19145 PF03483 B3/4 domain L1B16_19145 PF03484 tRNA synthetase B5 domain L1B16_19145 PF03147 Ferredoxin-fold anticodon binding domain L1B16_19145 PF01588 Putative tRNA binding domain L1B16_19145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L1B16_19150 PF00216 Bacterial DNA-binding protein L1B16_19155 PF13411 MerR HTH family regulatory protein L1B16_19175 PF02397 Bacterial sugar transferase L1B16_19195 PF13439 Glycosyltransferase Family 4 L1B16_19195 PF00534 Glycosyl transferases group 1 L1B16_19205 PF14667 Polysaccharide biosynthesis C-terminal domain L1B16_19220 PF03808 Glycosyl transferase WecB/TagA/CpsF family L1B16_19235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1B16_19235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1B16_19240 PF00753 Metallo-beta-lactamase superfamily L1B16_19240 PF16123 Hydroxyacylglutathione hydrolase C-terminus L1B16_19245 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family L1B16_19265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L1B16_19265 PF02779 Transketolase, pyrimidine binding domain L1B16_19265 PF02780 Transketolase, C-terminal domain L1B16_19275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1B16_19275 PF12806 Acetyl-CoA dehydrogenase C-terminal like L1B16_19275 PF02770 Acyl-CoA dehydrogenase, middle domain L1B16_19275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1B16_19310 PF00893 Small Multidrug Resistance protein L1B16_19315 PF00072 Response regulator receiver domain L1B16_19315 PF13426 PAS domain L1B16_19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_19320 PF04362 Bacterial Fe(2+) trafficking L1B16_19325 PF10576 Iron-sulfur binding domain of endonuclease III L1B16_19325 PF00633 Helix-hairpin-helix motif L1B16_19325 PF00730 HhH-GPD superfamily base excision DNA repair protein L1B16_19325 PF14815 NUDIX domain L1B16_19330 PF02881 SRP54-type protein, helical bundle domain L1B16_19330 PF00448 SRP54-type protein, GTPase domain L1B16_19340 PF05544 Proline racemase L1B16_19345 PF01266 FAD dependent oxidoreductase L1B16_19355 PF04324 BFD-like [2Fe-2S] binding domain L1B16_19355 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_19360 PF00701 Dihydrodipicolinate synthetase family L1B16_19365 PF00171 Aldehyde dehydrogenase family L1B16_19370 PF01321 Creatinase/Prolidase N-terminal domain L1B16_19370 PF00557 Metallopeptidase family M24 L1B16_19385 PF13520 Amino acid permease L1B16_19420 PF00593 TonB dependent receptor L1B16_19420 PF07715 TonB-dependent Receptor Plug Domain L1B16_19425 PF07532 Bacterial Ig-like domain (group 4) L1B16_19430 PF07532 Bacterial Ig-like domain (group 4) L1B16_19465 PF00183 Hsp90 protein L1B16_19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_19475 PF01467 Cytidylyltransferase-like L1B16_19490 PF00037 4Fe-4S binding domain L1B16_19500 PF02927 Cellulase N-terminal ig-like domain L1B16_19500 PF00759 Glycosyl hydrolase family 9 L1B16_19540 PF02547 Queuosine biosynthesis protein L1B16_19545 PF01702 Queuine tRNA-ribosyltransferase L1B16_19550 PF02699 Preprotein translocase subunit L1B16_19555 PF02355 Protein export membrane protein L1B16_19555 PF13721 SecD export protein N-terminal TM region L1B16_19555 PF07549 SecD/SecF GG Motif L1B16_19560 PF02355 Protein export membrane protein L1B16_19560 PF07549 SecD/SecF GG Motif L1B16_19570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L1B16_19575 PF00294 pfkB family carbohydrate kinase L1B16_19580 PF05524 PEP-utilising enzyme, N-terminal L1B16_19580 PF00391 PEP-utilising enzyme, mobile domain L1B16_19580 PF02896 PEP-utilising enzyme, TIM barrel domain L1B16_19580 PF00381 PTS HPr component phosphorylation site L1B16_19580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1B16_19585 PF00356 Bacterial regulatory proteins, lacI family L1B16_19590 PF13006 Insertion element 4 transposase N-terminal L1B16_19590 PF01609 Transposase DDE domain L1B16_19590 PF01609 Transposase DDE domain L1B16_19590 PF13006 Insertion element 4 transposase N-terminal L1B16_19595 PF00873 AcrB/AcrD/AcrF family L1B16_19600 PF00529 HlyD membrane-fusion protein of T1SS L1B16_19600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_19610 PF05088 Bacterial NAD-glutamate dehydrogenase L1B16_19620 PF16197 Ketoacyl-synthetase C-terminal extension L1B16_19620 PF00109 Beta-ketoacyl synthase, N-terminal domain L1B16_19620 PF14765 Polyketide synthase dehydratase L1B16_19620 PF00550 Phosphopantetheine attachment site L1B16_19620 PF02801 Beta-ketoacyl synthase, C-terminal domain L1B16_19620 PF08659 KR domain L1B16_19620 PF00698 Acyl transferase domain L1B16_19620 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_19635 PF00106 short chain dehydrogenase L1B16_19640 PF00107 Zinc-binding dehydrogenase L1B16_19640 PF08240 Alcohol dehydrogenase GroES-like domain L1B16_19650 PF07690 Major Facilitator Superfamily L1B16_19655 PF00072 Response regulator receiver domain L1B16_19660 PF00672 HAMP domain L1B16_19660 PF00512 His Kinase A (phospho-acceptor) domain L1B16_19660 PF01627 Hpt domain L1B16_19660 PF00072 Response regulator receiver domain L1B16_19660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1B16_19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_19665 PF04286 Protein of unknown function (DUF445) L1B16_19675 PF00202 Aminotransferase class-III L1B16_19680 PF07690 Major Facilitator Superfamily L1B16_19685 PF02634 FdhD/NarQ family L1B16_19690 PF00384 Molybdopterin oxidoreductase L1B16_19700 PF07690 Major Facilitator Superfamily L1B16_19700 PF00083 Sugar (and other) transporter L1B16_19705 PF01814 Hemerythrin HHE cation binding domain L1B16_19710 PF00072 Response regulator receiver domain L1B16_19710 PF00990 Diguanylate cyclase, GGDEF domain L1B16_19715 PF01266 FAD dependent oxidoreductase L1B16_19720 PF00120 Glutamine synthetase, catalytic domain L1B16_19725 PF07722 Peptidase C26 L1B16_19730 PF03951 Glutamine synthetase, beta-Grasp domain L1B16_19730 PF00120 Glutamine synthetase, catalytic domain L1B16_19735 PF00202 Aminotransferase class-III L1B16_19740 PF13416 Bacterial extracellular solute-binding protein L1B16_19745 PF13533 Biotin-lipoyl like L1B16_19750 PF07690 Major Facilitator Superfamily L1B16_19755 PF02321 Outer membrane efflux protein L1B16_19760 PF08402 TOBE domain L1B16_19760 PF00005 ABC transporter L1B16_19765 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_19770 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_19780 PF00171 Aldehyde dehydrogenase family L1B16_19795 PF00571 CBS domain L1B16_19795 PF03471 Transporter associated domain L1B16_19805 PF02130 Uncharacterized protein family UPF0054 L1B16_19815 PF02562 PhoH-like protein L1B16_19820 PF00919 Uncharacterized protein family UPF0004 L1B16_19820 PF04055 Radical SAM superfamily L1B16_19820 PF01938 TRAM domain L1B16_19825 PF13417 Glutathione S-transferase, N-terminal domain L1B16_19835 PF01464 Transglycosylase SLT domain L1B16_19840 PF00355 Rieske [2Fe-2S] domain L1B16_19840 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal L1B16_19845 PF00032 Cytochrome b(C-terminal)/b6/petD L1B16_19845 PF00033 Cytochrome b/b6/petB L1B16_19850 PF02167 Cytochrome C1 family L1B16_19855 PF02798 Glutathione S-transferase, N-terminal domain L1B16_19855 PF00043 Glutathione S-transferase, C-terminal domain L1B16_19860 PF04386 Stringent starvation protein B L1B16_19870 PF08494 DEAD/H associated L1B16_19870 PF00271 Helicase conserved C-terminal domain L1B16_19870 PF00270 DEAD/DEAH box helicase L1B16_19875 PF02245 Methylpurine-DNA glycosylase (MPG) L1B16_19880 PF00672 HAMP domain L1B16_19880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_19880 PF02203 Tar ligand binding domain homologue L1B16_19885 PF01584 CheW-like domain L1B16_19890 PF00990 Diguanylate cyclase, GGDEF domain L1B16_19910 PF01612 3'-5' exonuclease L1B16_19910 PF00570 HRDC domain L1B16_19915 PF03781 Sulfatase-modifying factor enzyme 1 L1B16_19925 PF02601 Exonuclease VII, large subunit L1B16_19925 PF13742 OB-fold nucleic acid binding domain L1B16_19930 PF08331 Domain of unknown function (DUF1730) L1B16_19935 PF01256 Carbohydrate kinase L1B16_19935 PF03853 YjeF-related protein N-terminus L1B16_19945 PF01520 N-acetylmuramoyl-L-alanine amidase L1B16_19945 PF11741 AMIN domain L1B16_19950 PF08676 MutL C terminal dimerisation domain L1B16_19950 PF01119 DNA mismatch repair protein, C-terminal domain L1B16_19965 PF07879 PHB/PHA accumulation regulator DNA-binding domain L1B16_19965 PF05233 PHB accumulation regulatory domain L1B16_19970 PF00106 short chain dehydrogenase L1B16_19975 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1B16_19980 PF01435 Peptidase family M48 L1B16_19985 PF00563 EAL domain L1B16_19985 PF00990 Diguanylate cyclase, GGDEF domain L1B16_19985 PF00072 Response regulator receiver domain L1B16_19995 PF07152 YaeQ protein L1B16_20005 PF00313 'Cold-shock' DNA-binding domain L1B16_20010 PF14497 Glutathione S-transferase, C-terminal domain L1B16_20010 PF02798 Glutathione S-transferase, N-terminal domain L1B16_20015 PF07859 alpha/beta hydrolase fold L1B16_20020 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L1B16_20025 PF00156 Phosphoribosyl transferase domain L1B16_20030 PF03880 DbpA RNA binding domain L1B16_20030 PF00270 DEAD/DEAH box helicase L1B16_20030 PF00271 Helicase conserved C-terminal domain L1B16_20035 PF00005 ABC transporter L1B16_20035 PF12848 ABC transporter L1B16_20035 PF16326 ABC transporter C-terminal domain L1B16_20045 PF00545 ribonuclease L1B16_20050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L1B16_20050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L1B16_20055 PF00459 Inositol monophosphatase family L1B16_20060 PF00588 SpoU rRNA Methylase family L1B16_20070 PF13188 PAS domain L1B16_20070 PF00990 Diguanylate cyclase, GGDEF domain L1B16_20070 PF00563 EAL domain L1B16_20070 PF03707 Bacterial signalling protein N terminal repeat L1B16_20075 PF04055 Radical SAM superfamily L1B16_20080 PF01132 Elongation factor P (EF-P) OB domain L1B16_20080 PF08207 Elongation factor P (EF-P) KOW-like domain L1B16_20080 PF09285 Elongation factor P, C-terminal L1B16_20090 PF01979 Amidohydrolase family L1B16_20100 PF13419 Haloacid dehalogenase-like hydrolase L1B16_20110 PF00295 Glycosyl hydrolases family 28 L1B16_20145 PF05985 Ethanolamine ammonia-lyase light chain (EutC) L1B16_20150 PF06751 Ethanolamine ammonia lyase large subunit (EutB) L1B16_20160 PF08460 Bacterial SH3 domain L1B16_20160 PF01551 Peptidase family M23 L1B16_20165 PF01979 Amidohydrolase family L1B16_20170 PF01809 Putative membrane protein insertion efficiency factor L1B16_20175 PF01258 Prokaryotic dksA/traR C4-type zinc finger L1B16_20185 PF02657 Fe-S metabolism associated domain L1B16_20190 PF01406 tRNA synthetases class I (C) catalytic domain L1B16_20190 PF09190 DALR domain L1B16_20200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1B16_20200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1B16_20205 PF00764 Arginosuccinate synthase L1B16_20210 PF07687 Peptidase dimerisation domain L1B16_20210 PF01546 Peptidase family M20/M25/M40 L1B16_20215 PF00696 Amino acid kinase family L1B16_20215 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase L1B16_20225 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1B16_20230 PF00206 Lyase L1B16_20245 PF00696 Amino acid kinase family L1B16_20245 PF01472 PUA domain L1B16_20250 PF00171 Aldehyde dehydrogenase family L1B16_20255 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L1B16_20255 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L1B16_20275 PF02322 Cytochrome bd terminal oxidase subunit II L1B16_20280 PF01654 Cytochrome bd terminal oxidase subunit I L1B16_20285 PF00664 ABC transporter transmembrane region L1B16_20285 PF00005 ABC transporter L1B16_20290 PF00664 ABC transporter transmembrane region L1B16_20290 PF00005 ABC transporter L1B16_20300 PF00561 alpha/beta hydrolase fold L1B16_20310 PF03918 Cytochrome C biogenesis protein L1B16_20315 PF08534 Redoxin L1B16_20320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L1B16_20320 PF01578 Cytochrome C assembly protein L1B16_20325 PF03100 CcmE L1B16_20335 PF01578 Cytochrome C assembly protein L1B16_20340 PF03379 CcmB protein L1B16_20345 PF00005 ABC transporter L1B16_20350 PF00155 Aminotransferase class I and II L1B16_20355 PF00795 Carbon-nitrogen hydrolase L1B16_20370 PF01479 S4 domain L1B16_20370 PF00849 RNA pseudouridylate synthase L1B16_20375 PF04079 Segregation and condensation complex subunit ScpB L1B16_20380 PF02616 Segregation and condensation protein ScpA L1B16_20385 PF03795 YCII-related domain L1B16_20395 PF00356 Bacterial regulatory proteins, lacI family L1B16_20415 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_20420 PF00528 Binding-protein-dependent transport system inner membrane component L1B16_20445 PF00795 Carbon-nitrogen hydrolase L1B16_20450 PF04371 Porphyromonas-type peptidyl-arginine deiminase L1B16_20460 PF00444 Ribosomal protein L36 L1B16_20465 PF02224 Cytidylate kinase L1B16_20470 PF00575 S1 RNA binding domain L1B16_20475 PF00216 Bacterial DNA-binding protein L1B16_20485 PF18073 Rubredoxin metal binding domain L1B16_20490 PF00953 Glycosyl transferase family 4 L1B16_20495 PF02719 Polysaccharide biosynthesis protein L1B16_20500 PF00483 Nucleotidyl transferase L1B16_20515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L1B16_20515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L1B16_20520 PF00571 CBS domain L1B16_20520 PF00478 IMP dehydrogenase / GMP reductase domain L1B16_20525 PF00958 GMP synthase C terminal domain L1B16_20525 PF00117 Glutamine amidotransferase class-I L1B16_20525 PF02540 NAD synthase L1B16_20530 PF13356 Arm DNA-binding domain L1B16_20530 PF00589 Phage integrase family L1B16_20565 PF13087 AAA domain L1B16_20565 PF13086 AAA domain L1B16_20565 PF13087 AAA domain L1B16_20565 PF13195 Protein of unknown function (DUF4011) L1B16_20565 PF13195 Protein of unknown function (DUF4011) L1B16_20565 PF13086 AAA domain L1B16_20600 PF00561 alpha/beta hydrolase fold L1B16_20605 PF01566 Natural resistance-associated macrophage protein L1B16_20610 PF02742 Iron dependent repressor, metal binding and dimerisation domain L1B16_20610 PF01325 Iron dependent repressor, N-terminal DNA binding domain L1B16_20615 PF14437 MafB19-like deaminase L1B16_20620 PF00929 Exonuclease L1B16_20625 PF05552 Conserved TM helix L1B16_20625 PF00924 Mechanosensitive ion channel L1B16_20630 PF00391 PEP-utilising enzyme, mobile domain L1B16_20630 PF02896 PEP-utilising enzyme, TIM barrel domain L1B16_20630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L1B16_20635 PF03618 Kinase/pyrophosphorylase L1B16_20655 PF01066 CDP-alcohol phosphatidyltransferase L1B16_20665 PF00561 alpha/beta hydrolase fold L1B16_20680 PF01266 FAD dependent oxidoreductase L1B16_20680 PF00355 Rieske [2Fe-2S] domain L1B16_20690 PF00575 S1 RNA binding domain L1B16_20690 PF17674 HHH domain L1B16_20690 PF16921 Tex protein YqgF-like domain L1B16_20690 PF09371 Tex-like protein N-terminal domain L1B16_20695 PF00072 Response regulator receiver domain L1B16_20695 PF00672 HAMP domain L1B16_20695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1B16_20695 PF00512 His Kinase A (phospho-acceptor) domain L1B16_20695 PF01627 Hpt domain L1B16_20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_20715 PF03852 DNA mismatch endonuclease Vsr L1B16_20720 PF00145 C-5 cytosine-specific DNA methylase L1B16_20765 PF04002 RadC-like JAB domain L1B16_20835 PF00034 Cytochrome c L1B16_20845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1B16_20855 PF00873 AcrB/AcrD/AcrF family L1B16_20860 PF01081 KDPG and KHG aldolase L1B16_20865 PF00920 Dehydratase family L1B16_20870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L1B16_20875 PF02685 Glucokinase L1B16_20880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L1B16_20880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L1B16_20885 PF17912 MalK OB fold domain L1B16_20885 PF00005 ABC transporter L1B16_20900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1B16_20905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1B16_20910 PF00890 FAD binding domain L1B16_20910 PF02910 Fumarate reductase flavoprotein C-term L1B16_20920 PF13085 2Fe-2S iron-sulfur cluster binding domain L1B16_20925 PF03937 Flavinator of succinate dehydrogenase L1B16_20935 PF02687 FtsX-like permease family L1B16_20935 PF12704 MacB-like periplasmic core domain L1B16_20940 PF00005 ABC transporter L1B16_20955 PF01618 MotA/TolQ/ExbB proton channel family L1B16_20960 PF02472 Biopolymer transport protein ExbD/TolR L1B16_20965 PF00664 ABC transporter transmembrane region L1B16_20965 PF00005 ABC transporter L1B16_20970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase L1B16_20975 PF02348 Cytidylyltransferase L1B16_20980 PF01451 Low molecular weight phosphotyrosine protein phosphatase L1B16_20990 PF01541 GIY-YIG catalytic domain L1B16_20990 PF02151 UvrB/uvrC motif L1B16_20990 PF08459 UvrC Helix-hairpin-helix N-terminal L1B16_20995 PF01066 CDP-alcohol phosphatidyltransferase L1B16_21020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L1B16_21020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L1B16_21020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L1B16_21030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1B16_21040 PF00581 Rhodanese-like domain L1B16_21040 PF17773 UPF0176 acylphosphatase like domain L1B16_21045 PF00196 Bacterial regulatory proteins, luxR family L1B16_21045 PF00072 Response regulator receiver domain L1B16_21050 PF12111 Polyribonucleotide phosphorylase C terminal L1B16_21050 PF10150 Ribonuclease E/G family L1B16_21050 PF00575 S1 RNA binding domain L1B16_21055 PF00849 RNA pseudouridylate synthase L1B16_21055 PF01479 S4 domain L1B16_21060 PF02535 ZIP Zinc transporter L1B16_21070 PF01329 Pterin 4 alpha carbinolamine dehydratase L1B16_21075 PF01106 NifU-like domain L1B16_21105 PF02303 Helix-destabilising protein L1B16_21110 PF17091 Inovirus G7P protein L1B16_21240 PF17091 Inovirus G7P protein L1B16_21245 PF02303 Helix-destabilising protein L1B16_21315 PF00106 short chain dehydrogenase L1B16_21330 PF00196 Bacterial regulatory proteins, luxR family L1B16_21330 PF00072 Response regulator receiver domain L1B16_21345 PF01062 Bestrophin, RFP-TM, chloride channel L1B16_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1B16_21355 PF03466 LysR substrate binding domain L1B16_21375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_21375 PF02203 Tar ligand binding domain homologue L1B16_21375 PF00672 HAMP domain L1B16_21385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1B16_21390 PF01494 FAD binding domain L1B16_21430 PF00512 His Kinase A (phospho-acceptor) domain L1B16_21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_21435 PF13426 PAS domain L1B16_21435 PF00072 Response regulator receiver domain L1B16_21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_21450 PF07995 Glucose / Sorbosone dehydrogenase L1B16_21480 PF03797 Autotransporter beta-domain L1B16_21480 PF00082 Subtilase family L1B16_21485 PF13006 Insertion element 4 transposase N-terminal L1B16_21485 PF01609 Transposase DDE domain L1B16_21485 PF13006 Insertion element 4 transposase N-terminal L1B16_21485 PF01609 Transposase DDE domain L1B16_21495 PF12951 Passenger-associated-transport-repeat L1B16_21495 PF12951 Passenger-associated-transport-repeat L1B16_21495 PF12951 Passenger-associated-transport-repeat L1B16_21505 PF08448 PAS fold L1B16_21505 PF08447 PAS fold L1B16_21505 PF00990 Diguanylate cyclase, GGDEF domain L1B16_21505 PF00563 EAL domain L1B16_21525 PF01266 FAD dependent oxidoreductase L1B16_21540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L1B16_21565 PF10414 Sirohaem synthase dimerisation region L1B16_21565 PF14824 Sirohaem biosynthesis protein central L1B16_21565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1B16_21575 PF12804 MobA-like NTP transferase domain L1B16_21580 PF03454 MoeA C-terminal region (domain IV) L1B16_21580 PF03453 MoeA N-terminal region (domain I and II) L1B16_21580 PF00994 Probable molybdopterin binding domain L1B16_21590 PF03372 Endonuclease/Exonuclease/phosphatase family L1B16_21615 PF00899 ThiF family L1B16_21620 PF00994 Probable molybdopterin binding domain L1B16_21620 PF03453 MoeA N-terminal region (domain I and II) L1B16_21620 PF03454 MoeA C-terminal region (domain IV) L1B16_21625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L1B16_21625 PF01926 50S ribosome-binding GTPase L1B16_21630 PF01011 PQQ enzyme repeat L1B16_21630 PF13360 PQQ-like domain L1B16_21640 PF13464 Domain of unknown function (DUF4115) L1B16_21650 PF04055 Radical SAM superfamily L1B16_21655 PF00334 Nucleoside diphosphate kinase L1B16_21665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L1B16_21665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L1B16_21665 PF00378 Enoyl-CoA hydratase/isomerase L1B16_21670 PF02803 Thiolase, C-terminal domain L1B16_21670 PF00108 Thiolase, N-terminal domain L1B16_21675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L1B16_21680 PF12002 MgsA AAA+ ATPase C terminal L1B16_21680 PF16193 AAA C-terminal domain L1B16_21680 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_21690 PF03548 Outer membrane lipoprotein carrier protein LolA L1B16_21700 PF01580 FtsK/SpoIIIE family L1B16_21700 PF09397 Ftsk gamma domain L1B16_21700 PF17854 FtsK alpha domain L1B16_21700 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L1B16_21705 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1B16_21715 PF03588 Leucyl/phenylalanyl-tRNA protein transferase L1B16_21720 PF01176 Translation initiation factor 1A / IF-1 L1B16_21725 PF02861 Clp amino terminal domain, pathogenicity island component L1B16_21725 PF17871 AAA lid domain L1B16_21725 PF07724 AAA domain (Cdc48 subfamily) L1B16_21725 PF00004 ATPase family associated with various cellular activities (AAA) L1B16_21725 PF10431 C-terminal, D2-small domain, of ClpB protein L1B16_21730 PF02617 ATP-dependent Clp protease adaptor protein ClpS L1B16_21735 PF00293 NUDIX domain L1B16_21745 PF04356 Protein of unknown function (DUF489) L1B16_21750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1B16_21750 PF12729 Four helix bundle sensory module for signal transduction L1B16_21750 PF00672 HAMP domain L1B16_21760 PF00563 EAL domain L1B16_21760 PF00990 Diguanylate cyclase, GGDEF domain L1B16_21760 PF03707 Bacterial signalling protein N terminal repeat L1B16_21765 PF07730 Histidine kinase L1B16_21765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_21770 PF00990 Diguanylate cyclase, GGDEF domain L1B16_21770 PF00563 EAL domain L1B16_21770 PF03707 Bacterial signalling protein N terminal repeat L1B16_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1B16_21775 PF00512 His Kinase A (phospho-acceptor) domain L1B16_21795 PF01584 CheW-like domain L1B16_21795 PF00072 Response regulator receiver domain L1B16_21800 PF00460 Flagella basal body rod protein L1B16_21805 PF00460 Flagella basal body rod protein L1B16_21805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1B16_21810 PF03963 Flagellar hook capping protein - N-terminal region L1B16_21815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1B16_21815 PF00460 Flagella basal body rod protein L1B16_21815 PF07559 Flagellar basal body protein FlaE L1B16_21820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1B16_21820 PF00460 Flagella basal body rod protein L1B16_21825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1B16_21825 PF00460 Flagella basal body rod protein L1B16_21830 PF02107 Flagellar L-ring protein L1B16_21835 PF02119 Flagellar P-ring protein L1B16_21840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L1B16_21840 PF10135 Rod binding protein L1B16_21845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1B16_21845 PF07196 Flagellin hook IN motif L1B16_21850 PF00669 Bacterial flagellin N-terminal helical region L1B16_21850 PF00700 Bacterial flagellin C-terminal helical region L1B16_21855 PF00669 Bacterial flagellin N-terminal helical region L1B16_21855 PF00700 Bacterial flagellin C-terminal helical region L1B16_21860 PF02465 Flagellar hook-associated protein 2 N-terminus L1B16_21860 PF07195 Flagellar hook-associated protein 2 C-terminus L1B16_21860 PF07196 Flagellin hook IN motif L1B16_21865 PF02561 Flagellar protein FliS L1B16_21880 PF00196 Bacterial regulatory proteins, luxR family L1B16_21880 PF00072 Response regulator receiver domain L1B16_21885 PF04552 Sigma-54, DNA binding domain L1B16_21885 PF00309 Sigma-54 factor, Activator interacting domain (AID) L1B16_21885 PF04963 Sigma-54 factor, core binding domain L1B16_21890 PF00072 Response regulator receiver domain L1B16_21890 PF01339 CheB methylesterase L1B16_21895 PF00158 Sigma-54 interaction domain L1B16_21895 PF02954 Bacterial regulatory protein, Fis family L1B16_21895 PF06490 Flagellar regulatory protein FleQ L1B16_21930 PF02796 Helix-turn-helix domain of resolvase L1B16_21930 PF00239 Resolvase, N terminal domain L1B16_21975 PF09722 Protein of unknown function (DUF2384) L1B16_21975 PF01936 NYN domain L1B16_22010 PF01526 Tn3 transposase DDE domain L1B16_22010 PF13700 Domain of unknown function (DUF4158) L1B16_22015 PF13406 Transglycosylase SLT domain L1B16_22050 PF00239 Resolvase, N terminal domain L1B16_22050 PF02796 Helix-turn-helix domain of resolvase L1B16_22070 PF00376 MerR family regulatory protein L1B16_22070 PF13614 AAA domain L1B16_22100 PF09397 Ftsk gamma domain L1B16_22100 PF01580 FtsK/SpoIIIE family L1B16_22100 PF17854 FtsK alpha domain L1B16_22100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L1B16_22105 PF07996 Type IV secretion system proteins L1B16_22120 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1B16_22175 PF00239 Resolvase, N terminal domain L1B16_22175 PF02796 Helix-turn-helix domain of resolvase L1B16_22220 PF01936 NYN domain L1B16_22220 PF09722 Protein of unknown function (DUF2384) L1B16_22255 PF13700 Domain of unknown function (DUF4158) L1B16_22255 PF01526 Tn3 transposase DDE domain L1B16_22260 PF13406 Transglycosylase SLT domain