locus-tag class description XACM_0001 PF11638 DnaA N-terminal domain XACM_0001 PF08299 Bacterial dnaA protein helix-turn-helix XACM_0001 PF00308 Bacterial dnaA protein XACM_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XACM_0002 PF02767 DNA polymerase III beta subunit, central domain XACM_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XACM_0004 PF02463 RecF/RecN/SMC N terminal domain XACM_0005 PF18053 DNA gyrase B subunit insert domain XACM_0005 PF00986 DNA gyrase B subunit, carboxyl terminus XACM_0005 PF00204 DNA gyrase B XACM_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0005 PF01751 Toprim domain XACM_0007 PF01435 Peptidase family M48 XACM_0009 PF03544 Gram-negative bacterial TonB protein C-terminal XACM_0010 PF01618 MotA/TolQ/ExbB proton channel family XACM_0011 PF02472 Biopolymer transport protein ExbD/TolR XACM_0012 PF02472 Biopolymer transport protein ExbD/TolR XACM_0013 PF02472 Biopolymer transport protein ExbD/TolR XACM_0014 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XACM_0016 PF13091 PLD-like domain XACM_0016 PF13396 Phospholipase_D-nuclease N-terminal XACM_0019 PF04055 Radical SAM superfamily XACM_0021 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XACM_0024 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XACM_0024 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XACM_0025 PF13180 PDZ domain XACM_0025 PF03572 Peptidase family S41 XACM_0026 PF01551 Peptidase family M23 XACM_0028 PF04389 Peptidase family M28 XACM_0030 PF00150 Cellulase (glycosyl hydrolase family 5) XACM_0031 PF00150 Cellulase (glycosyl hydrolase family 5) XACM_0032 PF00150 Cellulase (glycosyl hydrolase family 5) XACM_0033 PF00107 Zinc-binding dehydrogenase XACM_0033 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0034 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_0034 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XACM_0035 PF04898 Glutamate synthase central domain XACM_0035 PF01645 Conserved region in glutamate synthase XACM_0035 PF01493 GXGXG motif XACM_0035 PF00310 Glutamine amidotransferases class-II XACM_0039 PF01804 Penicillin amidase XACM_0041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0041 PF03466 LysR substrate binding domain XACM_0052 PF00270 DEAD/DEAH box helicase XACM_0052 PF09369 Domain of unknown function (DUF1998) XACM_0052 PF00271 Helicase conserved C-terminal domain XACM_0053 PF03006 Haemolysin-III related XACM_0056 PF00106 short chain dehydrogenase XACM_0058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0058 PF03466 LysR substrate binding domain XACM_0061 PF02525 Flavodoxin-like fold XACM_0063 PF13683 Integrase core domain XACM_0063 PF13276 HTH-like domain XACM_0064 PF01527 Transposase XACM_0066 PF13276 HTH-like domain XACM_0066 PF13683 Integrase core domain XACM_0067 PF01527 Transposase XACM_0072 PF05532 CsbD-like XACM_0076 PF16485 Protealysin propeptide XACM_0076 PF01447 Thermolysin metallopeptidase, catalytic domain XACM_0076 PF02868 Thermolysin metallopeptidase, alpha-helical domain XACM_0078 PF13344 Haloacid dehalogenase-like hydrolase XACM_0078 PF00293 NUDIX domain XACM_0081 PF00085 Thioredoxin XACM_0082 PF00083 Sugar (and other) transporter XACM_0082 PF08946 Osmosensory transporter coiled coil XACM_0090 PF07726 ATPase family associated with various cellular activities (AAA) XACM_0090 PF17863 AAA lid domain XACM_0099 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XACM_0100 PF00155 Aminotransferase class I and II XACM_0101 PF07715 TonB-dependent Receptor Plug Domain XACM_0101 PF00593 TonB dependent receptor XACM_0104 PF00171 Aldehyde dehydrogenase family XACM_0108 PF02735 Ku70/Ku80 beta-barrel domain XACM_0109 PF01070 FMN-dependent dehydrogenase XACM_0112 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XACM_0113 PF07730 Histidine kinase XACM_0114 PF00196 Bacterial regulatory proteins, luxR family XACM_0114 PF00072 Response regulator receiver domain XACM_0117 PF18500 CadC C-terminal domain 1 XACM_0117 PF00486 Transcriptional regulatory protein, C terminal XACM_0118 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XACM_0118 PF07055 Enoyl reductase FAD binding domain XACM_0118 PF12241 Trans-2-enoyl-CoA reductase catalytic region XACM_0120 PF00294 pfkB family carbohydrate kinase XACM_0131 PF01527 Transposase XACM_0132 PF13683 Integrase core domain XACM_0132 PF13276 HTH-like domain XACM_0139 PF11896 Domain of unknown function (DUF3416) XACM_0139 PF00128 Alpha amylase, catalytic domain XACM_0140 PF16657 Maltogenic Amylase, C-terminal domain XACM_0140 PF00128 Alpha amylase, catalytic domain XACM_0141 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XACM_0141 PF02806 Alpha amylase, C-terminal all-beta domain XACM_0141 PF00128 Alpha amylase, catalytic domain XACM_0143 PF00248 Aldo/keto reductase family XACM_0144 PF00135 Carboxylesterase family XACM_0145 PF13472 GDSL-like Lipase/Acylhydrolase family XACM_0145 PF07859 alpha/beta hydrolase fold XACM_0147 PF03480 Bacterial extracellular solute-binding protein, family 7 XACM_0149 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component XACM_0150 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XACM_0150 PF04616 Glycosyl hydrolases family 43 XACM_0151 PF00356 Bacterial regulatory proteins, lacI family XACM_0153 PF04962 KduI/IolB family XACM_0156 PF00657 GDSL-like Lipase/Acylhydrolase XACM_0158 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XACM_0159 PF01037 Lrp/AsnC ligand binding domain XACM_0160 PF00593 TonB dependent receptor XACM_0160 PF07715 TonB-dependent Receptor Plug Domain XACM_0160 PF07660 Secretin and TonB N terminus short domain XACM_0161 PF01734 Patatin-like phospholipase XACM_0162 PF01546 Peptidase family M20/M25/M40 XACM_0162 PF07687 Peptidase dimerisation domain XACM_0164 PF00005 ABC transporter XACM_0167 PF00005 ABC transporter XACM_0168 PF00528 Binding-protein-dependent transport system inner membrane component XACM_0169 PF12867 DinB superfamily XACM_0169 PF03781 Sulfatase-modifying factor enzyme 1 XACM_0177 PF01883 Iron-sulfur cluster assembly protein XACM_0177 PF10609 NUBPL iron-transfer P-loop NTPase XACM_0180 PF13091 PLD-like domain XACM_0181 PF03061 Thioesterase superfamily XACM_0186 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0186 PF00107 Zinc-binding dehydrogenase XACM_0188 PF02673 Bacitracin resistance protein BacA XACM_0189 PF03951 Glutamine synthetase, beta-Grasp domain XACM_0189 PF00120 Glutamine synthetase, catalytic domain XACM_0190 PF00543 Nitrogen regulatory protein P-II XACM_0191 PF00909 Ammonium Transporter Family XACM_0192 PF00989 PAS fold XACM_0192 PF00512 His Kinase A (phospho-acceptor) domain XACM_0192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0193 PF00158 Sigma-54 interaction domain XACM_0193 PF02954 Bacterial regulatory protein, Fis family XACM_0193 PF00072 Response regulator receiver domain XACM_0194 PF00080 Copper/zinc superoxide dismutase (SODC) XACM_0195 PF00080 Copper/zinc superoxide dismutase (SODC) XACM_0196 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XACM_0198 PF02803 Thiolase, C-terminal domain XACM_0198 PF00108 Thiolase, N-terminal domain XACM_0205 PF00581 Rhodanese-like domain XACM_0206 PF02556 Preprotein translocase subunit SecB XACM_0207 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XACM_0207 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XACM_0209 PF00205 Thiamine pyrophosphate enzyme, central domain XACM_0209 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XACM_0209 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XACM_0210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0211 PF00072 Response regulator receiver domain XACM_0211 PF00158 Sigma-54 interaction domain XACM_0211 PF02954 Bacterial regulatory protein, Fis family XACM_0215 PF07690 Major Facilitator Superfamily XACM_0216 PF00588 SpoU rRNA Methylase family XACM_0219 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XACM_0219 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XACM_0220 PF02661 Fic/DOC family XACM_0220 PF13784 Fic/DOC family N-terminal XACM_0221 PF00561 alpha/beta hydrolase fold XACM_0222 PF03692 Putative zinc- or iron-chelating domain XACM_0223 PF00501 AMP-binding enzyme XACM_0224 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XACM_0226 PF07478 D-ala D-ala ligase C-terminus XACM_0226 PF01820 D-ala D-ala ligase N-terminus XACM_0228 PF03109 ABC1 family XACM_0230 PF00849 RNA pseudouridylate synthase XACM_0232 PF00472 RF-1 domain XACM_0234 PF01112 Asparaginase XACM_0235 PF01432 Peptidase family M3 XACM_0236 PF12706 Beta-lactamase superfamily domain XACM_0239 PF12833 Helix-turn-helix domain XACM_0240 PF00999 Sodium/hydrogen exchanger family XACM_0241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0241 PF03466 LysR substrate binding domain XACM_0242 PF01274 Malate synthase XACM_0243 PF00463 Isocitrate lyase family XACM_0244 PF00990 Diguanylate cyclase, GGDEF domain XACM_0248 PF00326 Prolyl oligopeptidase family XACM_0249 PF00289 Biotin carboxylase, N-terminal domain XACM_0249 PF02785 Biotin carboxylase C-terminal domain XACM_0249 PF00364 Biotin-requiring enzyme XACM_0249 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XACM_0250 PF01039 Carboxyl transferase domain XACM_0251 PF02770 Acyl-CoA dehydrogenase, middle domain XACM_0251 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_0251 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_0262 PF02492 CobW/HypB/UreG, nucleotide-binding domain XACM_0262 PF07683 Cobalamin synthesis protein cobW C-terminal domain XACM_0266 PF03969 AFG1-like ATPase XACM_0267 PF01047 MarR family XACM_0268 PF02566 OsmC-like protein XACM_0272 PF16884 N-terminal domain of oxidoreductase XACM_0272 PF00107 Zinc-binding dehydrogenase XACM_0275 PF00849 RNA pseudouridylate synthase XACM_0277 PF08482 ATP-dependent helicase C-terminal XACM_0277 PF04408 Helicase associated domain (HA2) XACM_0277 PF00270 DEAD/DEAH box helicase XACM_0277 PF00271 Helicase conserved C-terminal domain XACM_0279 PF07308 Protein of unknown function (DUF1456) XACM_0280 PF00576 HIUase/Transthyretin family XACM_0281 PF13454 FAD-NAD(P)-binding XACM_0282 PF09349 OHCU decarboxylase XACM_0282 PF01014 Uricase XACM_0285 PF00266 Aminotransferase class-V XACM_0286 PF07687 Peptidase dimerisation domain XACM_0286 PF01546 Peptidase family M20/M25/M40 XACM_0287 PF03466 LysR substrate binding domain XACM_0287 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0288 PF00561 alpha/beta hydrolase fold XACM_0291 PF01425 Amidase XACM_0292 PF01156 Inosine-uridine preferring nucleoside hydrolase XACM_0294 PF00860 Permease family XACM_0295 PF00111 2Fe-2S iron-sulfur cluster binding domain XACM_0296 PF00355 Rieske [2Fe-2S] domain XACM_0297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0297 PF03466 LysR substrate binding domain XACM_0299 PF01026 TatD related DNase XACM_0302 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0302 PF03466 LysR substrate binding domain XACM_0303 PF07690 Major Facilitator Superfamily XACM_0305 PF00561 alpha/beta hydrolase fold XACM_0305 PF08386 TAP-like protein XACM_0306 PF02146 Sir2 family XACM_0307 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XACM_0308 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XACM_0308 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XACM_0310 PF00551 Formyl transferase XACM_0311 PF00072 Response regulator receiver domain XACM_0311 PF00486 Transcriptional regulatory protein, C terminal XACM_0312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0312 PF00672 HAMP domain XACM_0312 PF00512 His Kinase A (phospho-acceptor) domain XACM_0313 PF00529 HlyD membrane-fusion protein of T1SS XACM_0313 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_0314 PF00873 AcrB/AcrD/AcrF family XACM_0315 PF02321 Outer membrane efflux protein XACM_0318 PF02677 Epoxyqueuosine reductase QueH XACM_0319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0319 PF03466 LysR substrate binding domain XACM_0320 PF03358 NADPH-dependent FMN reductase XACM_0322 PF01717 Cobalamin-independent synthase, Catalytic domain XACM_0322 PF08267 Cobalamin-independent synthase, N-terminal domain XACM_0323 PF03812 2-keto-3-deoxygluconate permease XACM_0326 PF05368 NmrA-like family XACM_0327 PF01638 HxlR-like helix-turn-helix XACM_0329 PF13276 HTH-like domain XACM_0329 PF13683 Integrase core domain XACM_0330 PF01527 Transposase XACM_0333 PF00920 Dehydratase family XACM_0336 PF00132 Bacterial transferase hexapeptide (six repeats) XACM_0337 PF07690 Major Facilitator Superfamily XACM_0338 PF01966 HD domain XACM_0338 PF11871 Domain of unknown function (DUF3391) XACM_0342 PF00171 Aldehyde dehydrogenase family XACM_0344 PF01494 FAD binding domain XACM_0346 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XACM_0346 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XACM_0347 PF00230 Major intrinsic protein XACM_0348 PF01266 FAD dependent oxidoreductase XACM_0348 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XACM_0349 PF08220 DeoR-like helix-turn-helix domain XACM_0349 PF00455 DeoR C terminal sensor domain XACM_0351 PF00355 Rieske [2Fe-2S] domain XACM_0352 PF01144 Coenzyme A transferase XACM_0353 PF01144 Coenzyme A transferase XACM_0354 PF02803 Thiolase, C-terminal domain XACM_0354 PF00108 Thiolase, N-terminal domain XACM_0355 PF00775 Dioxygenase XACM_0355 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XACM_0357 PF10397 Adenylosuccinate lyase C-terminus XACM_0357 PF00206 Lyase XACM_0358 PF12146 Serine aminopeptidase, S33 XACM_0359 PF02627 Carboxymuconolactone decarboxylase family XACM_0361 PF01614 Bacterial transcriptional regulator XACM_0361 PF09339 IclR helix-turn-helix domain XACM_0363 PF07859 alpha/beta hydrolase fold XACM_0364 PF10677 Protein of unknown function (DUF2490) XACM_0365 PF13932 GidA associated domain XACM_0365 PF01134 Glucose inhibited division protein A XACM_0368 PF13291 ACT domain XACM_0368 PF00291 Pyridoxal-phosphate dependent enzyme XACM_0372 PF13649 Methyltransferase domain XACM_0373 PF00106 short chain dehydrogenase XACM_0374 PF12697 Alpha/beta hydrolase family XACM_0376 PF00155 Aminotransferase class I and II XACM_0377 PF06968 Biotin and Thiamin Synthesis associated domain XACM_0377 PF04055 Radical SAM superfamily XACM_0379 PF01040 UbiA prenyltransferase family XACM_0382 PF05819 NolX protein XACM_0391 PF01313 Bacterial export proteins, family 3 XACM_0392 PF00813 FliP family XACM_0395 PF00771 FHIPEP family XACM_0396 PF01312 FlhB HrpN YscU SpaS Family XACM_0399 PF01514 Secretory protein of YscJ/FliF family XACM_0402 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XACM_0402 PF02874 ATP synthase alpha/beta family, beta-barrel domain XACM_0402 PF18269 T3SS EscN ATPase C-terminal domain XACM_0404 PF01311 Bacterial export proteins, family 1 XACM_0407 PF01464 Transglycosylase SLT domain XACM_0411 PF12794 Mechanosensitive ion channel inner membrane domain 1 XACM_0411 PF12795 Mechanosensitive ion channel porin domain XACM_0411 PF00924 Mechanosensitive ion channel XACM_0412 PF00884 Sulfatase XACM_0414 PF03109 ABC1 family XACM_0415 PF05661 Protein of unknown function (DUF808) XACM_0416 PF00072 Response regulator receiver domain XACM_0416 PF00990 Diguanylate cyclase, GGDEF domain XACM_0417 PF08323 Starch synthase catalytic domain XACM_0417 PF00534 Glycosyl transferases group 1 XACM_0418 PF02806 Alpha amylase, C-terminal all-beta domain XACM_0418 PF00128 Alpha amylase, catalytic domain XACM_0418 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XACM_0419 PF00128 Alpha amylase, catalytic domain XACM_0419 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XACM_0419 PF11941 Domain of unknown function (DUF3459) XACM_0420 PF02446 4-alpha-glucanotransferase XACM_0421 PF00128 Alpha amylase, catalytic domain XACM_0423 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XACM_0423 PF00128 Alpha amylase, catalytic domain XACM_0424 PF13460 NAD(P)H-binding XACM_0427 PF06903 VirK protein XACM_0428 PF02321 Outer membrane efflux protein XACM_0431 PF00873 AcrB/AcrD/AcrF family XACM_0434 PF00271 Helicase conserved C-terminal domain XACM_0434 PF00270 DEAD/DEAH box helicase XACM_0436 PF02817 e3 binding domain XACM_0436 PF00364 Biotin-requiring enzyme XACM_0436 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XACM_0438 PF02779 Transketolase, pyrimidine binding domain XACM_0438 PF02780 Transketolase, C-terminal domain XACM_0439 PF00676 Dehydrogenase E1 component XACM_0441 PF03301 Tryptophan 2,3-dioxygenase XACM_0442 PF00854 POT family XACM_0444 PF01047 MarR family XACM_0445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XACM_0446 PF04480 Protein of unknown function (DUF559) XACM_0447 PF04209 homogentisate 1,2-dioxygenase XACM_0450 PF03334 Na+/H+ antiporter subunit XACM_0451 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XACM_0453 PF00361 Proton-conducting membrane transporter XACM_0454 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XACM_0455 PF13244 Domain of unknown function (DUF4040) XACM_0455 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XACM_0455 PF00361 Proton-conducting membrane transporter XACM_0455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XACM_0458 PF01447 Thermolysin metallopeptidase, catalytic domain XACM_0458 PF07504 Fungalysin/Thermolysin Propeptide Motif XACM_0458 PF01483 Proprotein convertase P-domain XACM_0458 PF02868 Thermolysin metallopeptidase, alpha-helical domain XACM_0459 PF00182 Chitinase class I XACM_0463 PF01259 SAICAR synthetase XACM_0464 PF05099 Tellurite resistance protein TerB XACM_0464 PF00226 DnaJ domain XACM_0465 PF00834 Ribulose-phosphate 3 epimerase family XACM_0466 PF00583 Acetyltransferase (GNAT) family XACM_0467 PF00781 Diacylglycerol kinase catalytic domain XACM_0468 PF00425 chorismate binding enzyme XACM_0468 PF04715 Anthranilate synthase component I, N terminal region XACM_0471 PF00117 Glutamine amidotransferase class-I XACM_0473 PF00591 Glycosyl transferase family, a/b domain XACM_0473 PF02885 Glycosyl transferase family, helical bundle domain XACM_0474 PF00218 Indole-3-glycerol phosphate synthase XACM_0476 PF00027 Cyclic nucleotide-binding domain XACM_0476 PF00325 Bacterial regulatory proteins, crp family XACM_0477 PF02675 S-adenosylmethionine decarboxylase XACM_0478 PF00893 Small Multidrug Resistance protein XACM_0479 PF03232 Ubiquinone biosynthesis protein COQ7 XACM_0480 PF00572 Ribosomal protein L13 XACM_0481 PF00380 Ribosomal protein S9/S16 XACM_0484 PF00293 NUDIX domain XACM_0486 PF00210 Ferritin-like domain XACM_0487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0487 PF00672 HAMP domain XACM_0487 PF01627 Hpt domain XACM_0487 PF00512 His Kinase A (phospho-acceptor) domain XACM_0487 PF00072 Response regulator receiver domain XACM_0487 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XACM_0488 PF00072 Response regulator receiver domain XACM_0488 PF00486 Transcriptional regulatory protein, C terminal XACM_0492 PF01521 Iron-sulphur cluster biosynthesis XACM_0495 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XACM_0495 PF00293 NUDIX domain XACM_0495 PF09297 NADH pyrophosphatase zinc ribbon domain XACM_0496 PF17113 Regulatory signalling modulator protein AmpE XACM_0496 PF03186 CobD/Cbib protein XACM_0501 PF07690 Major Facilitator Superfamily XACM_0502 PF12805 FUSC-like inner membrane protein yccS XACM_0503 PF02843 Phosphoribosylglycinamide synthetase, C domain XACM_0503 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XACM_0503 PF02844 Phosphoribosylglycinamide synthetase, N domain XACM_0505 PF02142 MGS-like domain XACM_0505 PF01808 AICARFT/IMPCHase bienzyme XACM_0506 PF01066 CDP-alcohol phosphatidyltransferase XACM_0507 PF12146 Serine aminopeptidase, S33 XACM_0507 PF12147 Putative methyltransferase XACM_0508 PF00782 Dual specificity phosphatase, catalytic domain XACM_0514 PF02954 Bacterial regulatory protein, Fis family XACM_0523 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XACM_0523 PF02785 Biotin carboxylase C-terminal domain XACM_0523 PF00289 Biotin carboxylase, N-terminal domain XACM_0525 PF00364 Biotin-requiring enzyme XACM_0526 PF01220 Dehydroquinase class II XACM_0527 PF02683 Cytochrome C biogenesis protein transmembrane region XACM_0527 PF11412 Disulphide bond corrector protein DsbC XACM_0528 PF03091 CutA1 divalent ion tolerance protein XACM_0529 PF04231 Endonuclease I XACM_0530 PF00166 Chaperonin 10 Kd subunit XACM_0531 PF00118 TCP-1/cpn60 chaperonin family XACM_0533 PF00593 TonB dependent receptor XACM_0533 PF07715 TonB-dependent Receptor Plug Domain XACM_0534 PF00793 DAHP synthetase I family XACM_0537 PF08450 SMP-30/Gluconolactonase/LRE-like region XACM_0539 PF03710 Glutamate-ammonia ligase adenylyltransferase XACM_0539 PF08335 GlnD PII-uridylyltransferase XACM_0540 PF02592 Putative vitamin uptake transporter XACM_0545 PF00881 Nitroreductase family XACM_0546 PF04264 YceI-like domain XACM_0551 PF16957 Malonate decarboxylase, alpha subunit, transporter XACM_0552 PF06857 Malonate decarboxylase delta subunit (MdcD) XACM_0553 PF01039 Carboxyl transferase domain XACM_0555 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG XACM_0556 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XACM_0557 PF00698 Acyl transferase domain XACM_0559 PF00392 Bacterial regulatory proteins, gntR family XACM_0559 PF07729 FCD domain XACM_0560 PF13419 Haloacid dehalogenase-like hydrolase XACM_0566 PF07745 Glycosyl hydrolase family 53 XACM_0567 PF17831 Pyruvate dehydrogenase E1 component middle domain XACM_0567 PF00456 Transketolase, thiamine diphosphate binding domain XACM_0568 PF00145 C-5 cytosine-specific DNA methylase XACM_0574 PF01527 Transposase XACM_0575 PF13683 Integrase core domain XACM_0575 PF13276 HTH-like domain XACM_0584 PF13409 Glutathione S-transferase, N-terminal domain XACM_0589 PF03176 MMPL family XACM_0589 PF12823 Domain of unknown function (DUF3817) XACM_0592 PF07759 Protein of unknown function (DUF1615) XACM_0593 PF05230 MASE2 domain XACM_0593 PF00990 Diguanylate cyclase, GGDEF domain XACM_0594 PF02082 Transcriptional regulator XACM_0599 PF00892 EamA-like transporter family XACM_0600 PF00497 Bacterial extracellular solute-binding proteins, family 3 XACM_0603 PF00324 Amino acid permease XACM_0605 PF01544 CorA-like Mg2+ transporter protein XACM_0607 PF01204 Trehalase XACM_0609 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XACM_0609 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XACM_0613 PF00563 EAL domain XACM_0613 PF00990 Diguanylate cyclase, GGDEF domain XACM_0613 PF08447 PAS fold XACM_0613 PF08448 PAS fold XACM_0614 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_0614 PF02203 Tar ligand binding domain homologue XACM_0614 PF00672 HAMP domain XACM_0615 PF00150 Cellulase (glycosyl hydrolase family 5) XACM_0615 PF00553 Cellulose binding domain XACM_0616 PF00916 Sulfate permease family XACM_0616 PF01740 STAS domain XACM_0617 PF00990 Diguanylate cyclase, GGDEF domain XACM_0617 PF08448 PAS fold XACM_0620 PF13632 Glycosyl transferase family group 2 XACM_0622 PF07694 5TMR of 5TMR-LYT XACM_0622 PF06580 Histidine kinase XACM_0623 PF04397 LytTr DNA-binding domain XACM_0623 PF00072 Response regulator receiver domain XACM_0624 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XACM_0624 PF03900 Porphobilinogen deaminase, C-terminal domain XACM_0630 PF00326 Prolyl oligopeptidase family XACM_0630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XACM_0631 PF00155 Aminotransferase class I and II XACM_0632 PF00326 Prolyl oligopeptidase family XACM_0632 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XACM_0633 PF04304 Protein of unknown function (DUF454) XACM_0635 PF01678 Diaminopimelate epimerase XACM_0638 PF00589 Phage integrase family XACM_0638 PF02899 Phage integrase, N-terminal SAM-like domain XACM_0639 PF00227 Proteasome subunit XACM_0640 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_0640 PF00004 ATPase family associated with various cellular activities (AAA) XACM_0640 PF07724 AAA domain (Cdc48 subfamily) XACM_0642 PF13673 Acetyltransferase (GNAT) domain XACM_0643 PF13533 Biotin-lipoyl like XACM_0645 PF01209 ubiE/COQ5 methyltransferase family XACM_0646 PF00563 EAL domain XACM_0646 PF00990 Diguanylate cyclase, GGDEF domain XACM_0646 PF03707 Bacterial signalling protein N terminal repeat XACM_0647 PF11838 ERAP1-like C-terminal domain XACM_0647 PF01433 Peptidase family M1 domain XACM_0650 PF13360 PQQ-like domain XACM_0654 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0654 PF00107 Zinc-binding dehydrogenase XACM_0656 PF00158 Sigma-54 interaction domain XACM_0656 PF01590 GAF domain XACM_0656 PF02954 Bacterial regulatory protein, Fis family XACM_0657 PF00294 pfkB family carbohydrate kinase XACM_0659 PF04085 rod shape-determining protein MreC XACM_0661 PF00905 Penicillin binding protein transpeptidase domain XACM_0661 PF03717 Penicillin-binding Protein dimerisation domain XACM_0662 PF01098 Cell cycle protein XACM_0665 PF00295 Glycosyl hydrolases family 28 XACM_0666 PF13406 Transglycosylase SLT domain XACM_0667 PF05036 Sporulation related domain XACM_0667 PF03330 Lytic transglycolase XACM_0668 PF07943 Penicillin-binding protein 5, C-terminal domain XACM_0668 PF00768 D-alanyl-D-alanine carboxypeptidase XACM_0671 PF04359 Protein of unknown function (DUF493) XACM_0672 PF03099 Biotin/lipoate A/B protein ligase family XACM_0673 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XACM_0673 PF04055 Radical SAM superfamily XACM_0674 PF00595 PDZ domain XACM_0674 PF17804 Tail specific protease N-terminal domain XACM_0674 PF03572 Peptidase family S41 XACM_0674 PF11818 C-terminal domain of tail specific protease (DUF3340) XACM_0676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0676 PF03466 LysR substrate binding domain XACM_0678 PF00293 NUDIX domain XACM_0678 PF01467 Cytidylyltransferase-like XACM_0685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XACM_0685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XACM_0686 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XACM_0686 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XACM_0687 PF04972 BON domain XACM_0688 PF01590 GAF domain XACM_0688 PF00512 His Kinase A (phospho-acceptor) domain XACM_0688 PF08446 PAS fold XACM_0688 PF00360 Phytochrome region XACM_0688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0689 PF00072 Response regulator receiver domain XACM_0690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0690 PF00512 His Kinase A (phospho-acceptor) domain XACM_0691 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XACM_0700 PF00263 Bacterial type II and III secretion system protein XACM_0700 PF03958 Bacterial type II/III secretion system short domain XACM_0701 PF00437 Type II/IV secretion system protein XACM_0702 PF00482 Type II secretion system (T2SS), protein F XACM_0703 PF07963 Prokaryotic N-terminal methylation motif XACM_0703 PF08334 Type II secretion system (T2SS), protein G XACM_0704 PF07963 Prokaryotic N-terminal methylation motif XACM_0704 PF12019 Type II transport protein GspH XACM_0705 PF02501 Type II secretion system (T2SS), protein I XACM_0705 PF07963 Prokaryotic N-terminal methylation motif XACM_0706 PF11612 Type II secretion system (T2SS), protein J XACM_0706 PF07963 Prokaryotic N-terminal methylation motif XACM_0707 PF03934 Type II secretion system (T2SS), protein K XACM_0712 PF07690 Major Facilitator Superfamily XACM_0713 PF00356 Bacterial regulatory proteins, lacI family XACM_0714 PF01380 SIS domain XACM_0715 PF01979 Amidohydrolase family XACM_0717 PF01966 HD domain XACM_0717 PF12627 Probable RNA and SrmB- binding site of polymerase A XACM_0717 PF01743 Poly A polymerase head domain XACM_0718 PF05199 GMC oxidoreductase XACM_0718 PF00732 GMC oxidoreductase XACM_0719 PF00171 Aldehyde dehydrogenase family XACM_0720 PF02028 BCCT, betaine/carnitine/choline family transporter XACM_0722 PF01323 DSBA-like thioredoxin domain XACM_0724 PF00034 Cytochrome c XACM_0725 PF01926 50S ribosome-binding GTPase XACM_0726 PF04107 Glutamate-cysteine ligase family 2(GCS2) XACM_0727 PF00512 His Kinase A (phospho-acceptor) domain XACM_0727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0727 PF00672 HAMP domain XACM_0728 PF00486 Transcriptional regulatory protein, C terminal XACM_0728 PF00072 Response regulator receiver domain XACM_0732 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0732 PF00107 Zinc-binding dehydrogenase XACM_0733 PF04828 Glutathione-dependent formaldehyde-activating enzyme XACM_0734 PF00756 Putative esterase XACM_0736 PF12848 ABC transporter XACM_0736 PF00005 ABC transporter XACM_0738 PF00464 Serine hydroxymethyltransferase XACM_0740 PF03477 ATP cone domain XACM_0742 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XACM_0742 PF01872 RibD C-terminal domain XACM_0744 PF00677 Lumazine binding domain XACM_0745 PF00925 GTP cyclohydrolase II XACM_0745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XACM_0746 PF00885 6,7-dimethyl-8-ribityllumazine synthase XACM_0747 PF01029 NusB family XACM_0748 PF00586 AIR synthase related protein, N-terminal domain XACM_0748 PF02769 AIR synthase related protein, C-terminal domain XACM_0752 PF03814 Potassium-transporting ATPase A subunit XACM_0754 PF02669 K+-transporting ATPase, c chain XACM_0755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0755 PF02702 Osmosensitive K+ channel His kinase sensor domain XACM_0755 PF13492 GAF domain XACM_0755 PF13493 Domain of unknown function (DUF4118) XACM_0755 PF00512 His Kinase A (phospho-acceptor) domain XACM_0756 PF00486 Transcriptional regulatory protein, C terminal XACM_0756 PF00072 Response regulator receiver domain XACM_0757 PF01565 FAD binding domain XACM_0757 PF02913 FAD linked oxidases, C-terminal domain XACM_0758 PF04307 LexA-binding, inner membrane-associated putative hydrolase XACM_0759 PF02021 Uncharacterised protein family UPF0102 XACM_0761 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XACM_0766 PF02381 MraZ protein, putative antitoxin-like XACM_0767 PF01795 MraW methylase family XACM_0768 PF04999 Cell division protein FtsL XACM_0770 PF03717 Penicillin-binding Protein dimerisation domain XACM_0770 PF00905 Penicillin binding protein transpeptidase domain XACM_0771 PF01225 Mur ligase family, catalytic domain XACM_0771 PF02875 Mur ligase family, glutamate ligase domain XACM_0771 PF08245 Mur ligase middle domain XACM_0772 PF08245 Mur ligase middle domain XACM_0772 PF02875 Mur ligase family, glutamate ligase domain XACM_0772 PF01225 Mur ligase family, catalytic domain XACM_0773 PF00953 Glycosyl transferase family 4 XACM_0774 PF01098 Cell cycle protein XACM_0775 PF03033 Glycosyltransferase family 28 N-terminal domain XACM_0775 PF04101 Glycosyltransferase family 28 C-terminal domain XACM_0776 PF08245 Mur ligase middle domain XACM_0776 PF02875 Mur ligase family, glutamate ligase domain XACM_0776 PF01225 Mur ligase family, catalytic domain XACM_0777 PF01820 D-ala D-ala ligase N-terminus XACM_0777 PF07478 D-ala D-ala ligase C-terminus XACM_0778 PF03799 Cell division protein FtsQ XACM_0778 PF08478 POTRA domain, FtsQ-type XACM_0779 PF02491 SHS2 domain inserted in FTSA XACM_0780 PF12327 FtsZ family, C-terminal domain XACM_0780 PF00091 Tubulin/FtsZ family, GTPase domain XACM_0781 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XACM_0783 PF01476 LysM domain XACM_0783 PF08525 Opacity-associated protein A N-terminal motif XACM_0783 PF01551 Peptidase family M23 XACM_0784 PF01043 SecA preprotein cross-linking domain XACM_0784 PF07517 SecA DEAD-like domain XACM_0784 PF02810 SEC-C motif XACM_0784 PF07516 SecA Wing and Scaffold domain XACM_0785 PF00293 NUDIX domain XACM_0787 PF02219 Methylenetetrahydrofolate reductase XACM_0789 PF14765 Polyketide synthase dehydratase XACM_0789 PF00550 Phosphopantetheine attachment site XACM_0789 PF08659 KR domain XACM_0789 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_0789 PF16197 Ketoacyl-synthetase C-terminal extension XACM_0789 PF00107 Zinc-binding dehydrogenase XACM_0789 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0789 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_0789 PF00698 Acyl transferase domain XACM_0790 PF09286 Pro-kumamolisin, activation domain XACM_0790 PF00082 Subtilase family XACM_0792 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XACM_0793 PF00128 Alpha amylase, catalytic domain XACM_0799 PF13649 Methyltransferase domain XACM_0800 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XACM_0800 PF05221 S-adenosyl-L-homocysteine hydrolase XACM_0802 PF00311 Phosphoenolpyruvate carboxylase XACM_0806 PF01389 OmpA-like transmembrane domain XACM_0806 PF00691 OmpA family XACM_0808 PF00328 Histidine phosphatase superfamily (branch 2) XACM_0809 PF02772 S-adenosylmethionine synthetase, central domain XACM_0809 PF00438 S-adenosylmethionine synthetase, N-terminal domain XACM_0809 PF02773 S-adenosylmethionine synthetase, C-terminal domain XACM_0811 PF13649 Methyltransferase domain XACM_0812 PF01207 Dihydrouridine synthase (Dus) XACM_0815 PF00294 pfkB family carbohydrate kinase XACM_0816 PF01773 Na+ dependent nucleoside transporter N-terminus XACM_0816 PF07662 Na+ dependent nucleoside transporter C-terminus XACM_0816 PF07670 Nucleoside recognition XACM_0818 PF00248 Aldo/keto reductase family XACM_0821 PF07715 TonB-dependent Receptor Plug Domain XACM_0821 PF00593 TonB dependent receptor XACM_0825 PF00528 Binding-protein-dependent transport system inner membrane component XACM_0826 PF00005 ABC transporter XACM_0828 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XACM_0830 PF00005 ABC transporter XACM_0831 PF13472 GDSL-like Lipase/Acylhydrolase family XACM_0832 PF00072 Response regulator receiver domain XACM_0832 PF00486 Transcriptional regulatory protein, C terminal XACM_0833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0833 PF08521 Two-component sensor kinase N-terminal XACM_0833 PF00512 His Kinase A (phospho-acceptor) domain XACM_0835 PF01219 Prokaryotic diacylglycerol kinase XACM_0839 PF01790 Prolipoprotein diacylglyceryl transferase XACM_0840 PF00303 Thymidylate synthase XACM_0842 PF00186 Dihydrofolate reductase XACM_0843 PF00149 Calcineurin-like phosphoesterase XACM_0844 PF04379 ApaG domain XACM_0845 PF00398 Ribosomal RNA adenine dimethylase XACM_0846 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XACM_0847 PF09312 SurA N-terminal domain XACM_0847 PF00639 PPIC-type PPIASE domain XACM_0848 PF04453 LPS transport system D XACM_0848 PF03968 OstA-like protein XACM_0849 PF00850 Histone deacetylase domain XACM_0850 PF01923 Cobalamin adenosyltransferase XACM_0852 PF01494 FAD binding domain XACM_0853 PF01494 FAD binding domain XACM_0858 PF07729 FCD domain XACM_0858 PF00392 Bacterial regulatory proteins, gntR family XACM_0859 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XACM_0860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XACM_0860 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XACM_0861 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0861 PF03466 LysR substrate binding domain XACM_0862 PF13193 AMP-binding enzyme C-terminal domain XACM_0862 PF00501 AMP-binding enzyme XACM_0863 PF00171 Aldehyde dehydrogenase family XACM_0864 PF00378 Enoyl-CoA hydratase/isomerase XACM_0868 PF08450 SMP-30/Gluconolactonase/LRE-like region XACM_0869 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XACM_0869 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XACM_0870 PF01728 FtsJ-like methyltransferase XACM_0870 PF18125 RlmM ferredoxin-like domain XACM_0874 PF00892 EamA-like transporter family XACM_0875 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XACM_0875 PF00749 tRNA synthetases class I (E and Q), catalytic domain XACM_0878 PF00990 Diguanylate cyclase, GGDEF domain XACM_0878 PF00072 Response regulator receiver domain XACM_0879 PF00672 HAMP domain XACM_0879 PF01627 Hpt domain XACM_0879 PF17149 Periplasmic sensor domain found in signal transduction proteins XACM_0879 PF00072 Response regulator receiver domain XACM_0879 PF00512 His Kinase A (phospho-acceptor) domain XACM_0879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_0880 PF00196 Bacterial regulatory proteins, luxR family XACM_0880 PF00072 Response regulator receiver domain XACM_0882 PF01625 Peptide methionine sulfoxide reductase XACM_0884 PF00923 Transaldolase/Fructose-6-phosphate aldolase XACM_0885 PF01272 Transcription elongation factor, GreA/GreB, C-term XACM_0885 PF14760 Rnk N-terminus XACM_0886 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_0886 PF03466 LysR substrate binding domain XACM_0887 PF13192 Thioredoxin domain XACM_0887 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_0888 PF10417 C-terminal domain of 1-Cys peroxiredoxin XACM_0888 PF00578 AhpC/TSA family XACM_0889 PF17827 PrmC N-terminal domain XACM_0889 PF05175 Methyltransferase small domain XACM_0890 PF00561 alpha/beta hydrolase fold XACM_0892 PF00293 NUDIX domain XACM_0893 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XACM_0893 PF00476 DNA polymerase family A XACM_0893 PF01612 3'-5' exonuclease XACM_0893 PF01367 5'-3' exonuclease, C-terminal SAM fold XACM_0897 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XACM_0897 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XACM_0897 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XACM_0901 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XACM_0902 PF02233 NAD(P) transhydrogenase beta subunit XACM_0906 PF01063 Amino-transferase class IV XACM_0907 PF04151 Bacterial pre-peptidase C-terminal domain XACM_0907 PF00082 Subtilase family XACM_0908 PF04151 Bacterial pre-peptidase C-terminal domain XACM_0908 PF00082 Subtilase family XACM_0909 PF04151 Bacterial pre-peptidase C-terminal domain XACM_0909 PF00082 Subtilase family XACM_0910 PF04073 Aminoacyl-tRNA editing domain XACM_0913 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XACM_0913 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XACM_0915 PF03358 NADPH-dependent FMN reductase XACM_0916 PF03631 Virulence factor BrkB XACM_0917 PF08534 Redoxin XACM_0918 PF00708 Acylphosphatase XACM_0920 PF03976 Polyphosphate kinase 2 (PPK2) XACM_0921 PF00994 Probable molybdopterin binding domain XACM_0923 PF03462 PCRF domain XACM_0923 PF00472 RF-1 domain XACM_0924 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XACM_0924 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XACM_0924 PF01488 Shikimate / quinate 5-dehydrogenase XACM_0926 PF03550 Outer membrane lipoprotein LolB XACM_0927 PF08544 GHMP kinases C terminal XACM_0927 PF00288 GHMP kinases N terminal domain XACM_0929 PF14572 Phosphoribosyl synthetase-associated domain XACM_0929 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XACM_0930 PF14693 Ribosomal protein TL5, C-terminal domain XACM_0930 PF01386 Ribosomal L25p family XACM_0931 PF01195 Peptidyl-tRNA hydrolase XACM_0932 PF06071 Protein of unknown function (DUF933) XACM_0932 PF01926 50S ribosome-binding GTPase XACM_0936 PF03144 Elongation factor Tu domain 2 XACM_0936 PF03143 Elongation factor Tu C-terminal domain XACM_0936 PF00009 Elongation factor Tu GTP binding domain XACM_0938 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XACM_0939 PF02357 Transcription termination factor nusG XACM_0939 PF00467 KOW motif XACM_0940 PF00298 Ribosomal protein L11, RNA binding domain XACM_0940 PF03946 Ribosomal protein L11, N-terminal domain XACM_0941 PF00687 Ribosomal protein L1p/L10e family XACM_0942 PF00466 Ribosomal protein L10 XACM_0943 PF16320 Ribosomal protein L7/L12 dimerisation domain XACM_0943 PF00542 Ribosomal protein L7/L12 C-terminal domain XACM_0944 PF04563 RNA polymerase beta subunit XACM_0944 PF04561 RNA polymerase Rpb2, domain 2 XACM_0944 PF04565 RNA polymerase Rpb2, domain 3 XACM_0944 PF10385 RNA polymerase beta subunit external 1 domain XACM_0944 PF00562 RNA polymerase Rpb2, domain 6 XACM_0944 PF04560 RNA polymerase Rpb2, domain 7 XACM_0945 PF00623 RNA polymerase Rpb1, domain 2 XACM_0945 PF04998 RNA polymerase Rpb1, domain 5 XACM_0945 PF05000 RNA polymerase Rpb1, domain 4 XACM_0945 PF04997 RNA polymerase Rpb1, domain 1 XACM_0945 PF04983 RNA polymerase Rpb1, domain 3 XACM_0946 PF00164 Ribosomal protein S12/S23 XACM_0947 PF00177 Ribosomal protein S7p/S5e XACM_0948 PF00009 Elongation factor Tu GTP binding domain XACM_0948 PF03764 Elongation factor G, domain IV XACM_0948 PF14492 Elongation Factor G, domain II XACM_0948 PF03144 Elongation factor Tu domain 2 XACM_0948 PF00679 Elongation factor G C-terminus XACM_0949 PF03143 Elongation factor Tu C-terminal domain XACM_0949 PF03144 Elongation factor Tu domain 2 XACM_0949 PF00009 Elongation factor Tu GTP binding domain XACM_0952 PF00338 Ribosomal protein S10p/S20e XACM_0953 PF00297 Ribosomal protein L3 XACM_0954 PF00573 Ribosomal protein L4/L1 family XACM_0955 PF00276 Ribosomal protein L23 XACM_0956 PF00181 Ribosomal Proteins L2, RNA binding domain XACM_0956 PF03947 Ribosomal Proteins L2, C-terminal domain XACM_0957 PF00203 Ribosomal protein S19 XACM_0958 PF00237 Ribosomal protein L22p/L17e XACM_0959 PF00189 Ribosomal protein S3, C-terminal domain XACM_0959 PF07650 KH domain XACM_0960 PF00252 Ribosomal protein L16p/L10e XACM_0961 PF00831 Ribosomal L29 protein XACM_0962 PF00366 Ribosomal protein S17 XACM_0963 PF00238 Ribosomal protein L14p/L23e XACM_0964 PF00467 KOW motif XACM_0964 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XACM_0965 PF00673 ribosomal L5P family C-terminus XACM_0965 PF00281 Ribosomal protein L5 XACM_0966 PF00253 Ribosomal protein S14p/S29e XACM_0967 PF00410 Ribosomal protein S8 XACM_0968 PF00347 Ribosomal protein L6 XACM_0969 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XACM_0970 PF00333 Ribosomal protein S5, N-terminal domain XACM_0970 PF03719 Ribosomal protein S5, C-terminal domain XACM_0971 PF00327 Ribosomal protein L30p/L7e XACM_0972 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XACM_0973 PF00344 SecY translocase XACM_0974 PF00416 Ribosomal protein S13/S18 XACM_0975 PF00411 Ribosomal protein S11 XACM_0976 PF01479 S4 domain XACM_0976 PF00163 Ribosomal protein S4/S9 N-terminal domain XACM_0977 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XACM_0977 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XACM_0977 PF01000 RNA polymerase Rpb3/RpoA insert domain XACM_0978 PF01196 Ribosomal protein L17 XACM_0979 PF02600 Disulfide bond formation protein DsbB XACM_0982 PF01474 Class-II DAHP synthetase family XACM_0984 PF01425 Amidase XACM_0987 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XACM_0988 PF00056 lactate/malate dehydrogenase, NAD binding domain XACM_0988 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XACM_0989 PF00043 Glutathione S-transferase, C-terminal domain XACM_0989 PF02798 Glutathione S-transferase, N-terminal domain XACM_0992 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_0992 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XACM_0994 PF00107 Zinc-binding dehydrogenase XACM_0994 PF08240 Alcohol dehydrogenase GroES-like domain XACM_0995 PF00691 OmpA family XACM_0995 PF00223 Photosystem I psaA/psaB protein XACM_0997 PF00849 RNA pseudouridylate synthase XACM_0999 PF00155 Aminotransferase class I and II XACM_1001 PF00528 Binding-protein-dependent transport system inner membrane component XACM_1002 PF00528 Binding-protein-dependent transport system inner membrane component XACM_1003 PF12857 TOBE-like domain XACM_1003 PF17850 CysA C-terminal regulatory domain XACM_1003 PF00005 ABC transporter XACM_1005 PF00107 Zinc-binding dehydrogenase XACM_1005 PF08240 Alcohol dehydrogenase GroES-like domain XACM_1007 PF04185 Phosphoesterase family XACM_1007 PF05506 Domain of unknown function (DUF756) XACM_1008 PF10459 Peptidase S46 XACM_1009 PF00300 Histidine phosphatase superfamily (branch 1) XACM_1010 PF02875 Mur ligase family, glutamate ligase domain XACM_1010 PF08245 Mur ligase middle domain XACM_1013 PF00156 Phosphoribosyl transferase domain XACM_1014 PF04305 Protein of unknown function (DUF455) XACM_1017 PF00149 Calcineurin-like phosphoesterase XACM_1018 PF01569 PAP2 superfamily XACM_1019 PF13439 Glycosyltransferase Family 4 XACM_1019 PF00534 Glycosyl transferases group 1 XACM_1020 PF02541 Ppx/GppA phosphatase family XACM_1021 PF13090 Polyphosphate kinase C-terminal domain 2 XACM_1021 PF17941 Polyphosphate kinase C-terminal domain 1 XACM_1021 PF13089 Polyphosphate kinase N-terminal domain XACM_1021 PF02503 Polyphosphate kinase middle domain XACM_1022 PF11808 Phosphate regulon sensor protein PhoR XACM_1022 PF00989 PAS fold XACM_1022 PF00512 His Kinase A (phospho-acceptor) domain XACM_1022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1023 PF00486 Transcriptional regulatory protein, C terminal XACM_1023 PF00072 Response regulator receiver domain XACM_1024 PF13181 Tetratricopeptide repeat XACM_1024 PF01435 Peptidase family M48 XACM_1025 PF00462 Glutaredoxin XACM_1027 PF00180 Isocitrate/isopropylmalate dehydrogenase XACM_1027 PF18324 Hypothetical protein TT1725 XACM_1033 PF00512 His Kinase A (phospho-acceptor) domain XACM_1033 PF00989 PAS fold XACM_1033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1035 PF05698 Bacterial trigger factor protein (TF) C-terminus XACM_1035 PF05697 Bacterial trigger factor protein (TF) XACM_1036 PF00574 Clp protease XACM_1037 PF07724 AAA domain (Cdc48 subfamily) XACM_1037 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_1037 PF06689 ClpX C4-type zinc finger XACM_1038 PF05362 Lon protease (S16) C-terminal proteolytic domain XACM_1038 PF00004 ATPase family associated with various cellular activities (AAA) XACM_1038 PF02190 ATP-dependent protease La (LON) substrate-binding domain XACM_1039 PF00216 Bacterial DNA-binding protein XACM_1044 PF05257 CHAP domain XACM_1044 PF01476 LysM domain XACM_1047 PF00075 RNase H XACM_1048 PF00929 Exonuclease XACM_1052 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XACM_1054 PF00753 Metallo-beta-lactamase superfamily XACM_1054 PF12706 Beta-lactamase superfamily domain XACM_1055 PF06463 Molybdenum Cofactor Synthesis C XACM_1055 PF04055 Radical SAM superfamily XACM_1057 PF01967 MoaC family XACM_1058 PF02597 ThiS family XACM_1059 PF02391 MoaE protein XACM_1069 PF13276 HTH-like domain XACM_1069 PF13683 Integrase core domain XACM_1070 PF01527 Transposase XACM_1076 PF12169 DNA polymerase III subunits gamma and tau domain III XACM_1076 PF12170 DNA polymerase III tau subunit V interacting with alpha XACM_1076 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XACM_1077 PF02575 YbaB/EbfC DNA-binding family XACM_1078 PF13662 Toprim domain XACM_1078 PF02132 RecR protein XACM_1079 PF01230 HIT domain XACM_1081 PF11992 Domain of unknown function (DUF3488) XACM_1081 PF01841 Transglutaminase-like superfamily XACM_1081 PF13559 Domain of unknown function (DUF4129) XACM_1083 PF07726 ATPase family associated with various cellular activities (AAA) XACM_1083 PF17863 AAA lid domain XACM_1086 PF02545 Maf-like protein XACM_1087 PF02620 Large ribosomal RNA subunit accumulation protein YceD XACM_1088 PF01783 Ribosomal L32p protein family XACM_1089 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XACM_1089 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XACM_1091 PF00698 Acyl transferase domain XACM_1093 PF00550 Phosphopantetheine attachment site XACM_1094 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_1094 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_1095 PF00425 chorismate binding enzyme XACM_1095 PF04715 Anthranilate synthase component I, N terminal region XACM_1096 PF02618 YceG-like family XACM_1097 PF09115 DNA polymerase III, delta subunit, C terminal XACM_1102 PF02954 Bacterial regulatory protein, Fis family XACM_1102 PF06506 Propionate catabolism activator XACM_1102 PF00158 Sigma-54 interaction domain XACM_1104 PF00285 Citrate synthase, C-terminal domain XACM_1105 PF00330 Aconitase family (aconitate hydratase) XACM_1105 PF00694 Aconitase C-terminal domain XACM_1107 PF04303 PrpF protein XACM_1108 PF00593 TonB dependent receptor XACM_1108 PF07715 TonB-dependent Receptor Plug Domain XACM_1111 PF07703 Alpha-2-macroglobulin bait region domain XACM_1111 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XACM_1111 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XACM_1111 PF00207 Alpha-2-macroglobulin family XACM_1111 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XACM_1111 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XACM_1111 PF01835 MG2 domain XACM_1111 PF17962 Bacterial macroglobulin domain 6 XACM_1114 PF00905 Penicillin binding protein transpeptidase domain XACM_1114 PF00912 Transglycosylase XACM_1114 PF06832 Penicillin-Binding Protein C-terminus Family XACM_1116 PF08534 Redoxin XACM_1118 PF00226 DnaJ domain XACM_1118 PF01556 DnaJ C terminal domain XACM_1119 PF00072 Response regulator receiver domain XACM_1120 PF12221 Bacterial membrane protein N terminal XACM_1120 PF01145 SPFH domain / Band 7 family XACM_1121 PF01145 SPFH domain / Band 7 family XACM_1124 PF00709 Adenylosuccinate synthetase XACM_1125 PF01433 Peptidase family M1 domain XACM_1125 PF11838 ERAP1-like C-terminal domain XACM_1128 PF00440 Bacterial regulatory proteins, tetR family XACM_1134 PF01555 DNA methylase XACM_1144 PF13456 Reverse transcriptase-like XACM_1144 PF00300 Histidine phosphatase superfamily (branch 1) XACM_1145 PF01256 Carbohydrate kinase XACM_1147 PF00723 Glycosyl hydrolases family 15 XACM_1149 PF17678 Glycosyl hydrolase family 92 N-terminal domain XACM_1149 PF07971 Glycosyl hydrolase family 92 XACM_1150 PF00106 short chain dehydrogenase XACM_1152 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_1156 PF17755 UvrA DNA-binding domain XACM_1157 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XACM_1157 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XACM_1158 PF00941 FAD binding domain in molybdopterin dehydrogenase XACM_1158 PF03450 CO dehydrogenase flavoprotein C-terminal domain XACM_1159 PF00111 2Fe-2S iron-sulfur cluster binding domain XACM_1159 PF01799 [2Fe-2S] binding domain XACM_1166 PF01726 LexA DNA binding domain XACM_1166 PF00717 Peptidase S24-like XACM_1169 PF07733 Bacterial DNA polymerase III alpha NTPase domain XACM_1169 PF14579 Helix-hairpin-helix motif XACM_1169 PF02811 PHP domain XACM_1169 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XACM_1170 PF00326 Prolyl oligopeptidase family XACM_1172 PF03169 OPT oligopeptide transporter protein XACM_1174 PF00326 Prolyl oligopeptidase family XACM_1174 PF07676 WD40-like Beta Propeller Repeat XACM_1174 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XACM_1177 PF12833 Helix-turn-helix domain XACM_1177 PF02311 AraC-like ligand binding domain XACM_1182 PF18011 C-terminal domain found in long catalases XACM_1182 PF06628 Catalase-related immune-responsive XACM_1182 PF00199 Catalase XACM_1183 PF00248 Aldo/keto reductase family XACM_1184 PF00135 Carboxylesterase family XACM_1185 PF02347 Glycine cleavage system P-protein XACM_1189 PF00664 ABC transporter transmembrane region XACM_1189 PF03412 Peptidase C39 family XACM_1189 PF00005 ABC transporter XACM_1190 PF07690 Major Facilitator Superfamily XACM_1193 PF08019 Phosphoethanolamine transferase EptA/EptB XACM_1193 PF00884 Sulfatase XACM_1196 PF00486 Transcriptional regulatory protein, C terminal XACM_1196 PF00072 Response regulator receiver domain XACM_1197 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1197 PF00512 His Kinase A (phospho-acceptor) domain XACM_1197 PF08521 Two-component sensor kinase N-terminal XACM_1199 PF03776 Septum formation topological specificity factor MinE XACM_1200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XACM_1201 PF03775 Septum formation inhibitor MinC, C-terminal domain XACM_1201 PF05209 Septum formation inhibitor MinC, N-terminal domain XACM_1203 PF07730 Histidine kinase XACM_1204 PF00196 Bacterial regulatory proteins, luxR family XACM_1204 PF00072 Response regulator receiver domain XACM_1207 PF00730 HhH-GPD superfamily base excision DNA repair protein XACM_1212 PF02222 ATP-grasp domain XACM_1214 PF04376 Arginine-tRNA-protein transferase, N terminus XACM_1214 PF04377 Arginine-tRNA-protein transferase, C terminus XACM_1217 PF04542 Sigma-70 region 2 XACM_1217 PF08281 Sigma-70, region 4 XACM_1220 PF00378 Enoyl-CoA hydratase/isomerase XACM_1223 PF17760 UvrA interaction domain XACM_1223 PF17755 UvrA DNA-binding domain XACM_1223 PF00005 ABC transporter XACM_1224 PF00829 Ribosomal prokaryotic L21 protein XACM_1225 PF01016 Ribosomal L27 protein XACM_1226 PF01018 GTP1/OBG XACM_1226 PF01926 50S ribosome-binding GTPase XACM_1227 PF01649 Ribosomal protein S20 XACM_1228 PF03023 Lipid II flippase MurJ XACM_1229 PF06574 FAD synthetase XACM_1229 PF01687 Riboflavin kinase XACM_1230 PF06827 Zinc finger found in FPG and IleRS XACM_1230 PF00133 tRNA synthetases class I (I, L, M and V) XACM_1230 PF08264 Anticodon-binding domain of tRNA XACM_1231 PF01252 Signal peptidase (SPase) II XACM_1232 PF02401 LytB protein XACM_1234 PF06481 COX Aromatic Rich Motif XACM_1234 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XACM_1235 PF00115 Cytochrome C and Quinol oxidase polypeptide I XACM_1236 PF00510 Cytochrome c oxidase subunit III XACM_1237 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XACM_1239 PF18073 Rubredoxin metal binding domain XACM_1240 PF05656 Protein of unknown function (DUF805) XACM_1243 PF12833 Helix-turn-helix domain XACM_1244 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1244 PF00183 Hsp90 protein XACM_1246 PF01740 STAS domain XACM_1246 PF08678 Rsbr N terminal XACM_1247 PF01740 STAS domain XACM_1248 PF13581 Histidine kinase-like ATPase domain XACM_1250 PF00512 His Kinase A (phospho-acceptor) domain XACM_1250 PF00672 HAMP domain XACM_1250 PF17149 Periplasmic sensor domain found in signal transduction proteins XACM_1250 PF01627 Hpt domain XACM_1250 PF00072 Response regulator receiver domain XACM_1250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1251 PF00512 His Kinase A (phospho-acceptor) domain XACM_1251 PF13188 PAS domain XACM_1251 PF00072 Response regulator receiver domain XACM_1251 PF08448 PAS fold XACM_1252 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XACM_1252 PF04616 Glycosyl hydrolases family 43 XACM_1253 PF07715 TonB-dependent Receptor Plug Domain XACM_1253 PF00593 TonB dependent receptor XACM_1254 PF00085 Thioredoxin XACM_1255 PF07237 Protein of unknown function (DUF1428) XACM_1256 PF13493 Domain of unknown function (DUF4118) XACM_1256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1256 PF13492 GAF domain XACM_1256 PF00512 His Kinase A (phospho-acceptor) domain XACM_1256 PF02702 Osmosensitive K+ channel His kinase sensor domain XACM_1257 PF01339 CheB methylesterase XACM_1258 PF01739 CheR methyltransferase, SAM binding domain XACM_1258 PF03705 CheR methyltransferase, all-alpha domain XACM_1259 PF00672 HAMP domain XACM_1259 PF00512 His Kinase A (phospho-acceptor) domain XACM_1259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1259 PF01627 Hpt domain XACM_1259 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XACM_1259 PF00072 Response regulator receiver domain XACM_1260 PF00072 Response regulator receiver domain XACM_1260 PF13426 PAS domain XACM_1260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1261 PF00072 Response regulator receiver domain XACM_1262 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XACM_1264 PF01263 Aldose 1-epimerase XACM_1265 PF01578 Cytochrome C assembly protein XACM_1266 PF02881 SRP54-type protein, helical bundle domain XACM_1266 PF02978 Signal peptide binding domain XACM_1266 PF00448 SRP54-type protein, GTPase domain XACM_1267 PF03060 Nitronate monooxygenase XACM_1268 PF01063 Amino-transferase class IV XACM_1269 PF00886 Ribosomal protein S16 XACM_1270 PF01782 RimM N-terminal domain XACM_1270 PF05239 PRC-barrel domain XACM_1271 PF01746 tRNA (Guanine-1)-methyltransferase XACM_1272 PF01245 Ribosomal protein L19 XACM_1273 PF01554 MatE XACM_1276 PF01479 S4 domain XACM_1277 PF00141 Peroxidase XACM_1279 PF00488 MutS domain V XACM_1279 PF05190 MutS family domain IV XACM_1279 PF01624 MutS domain I XACM_1279 PF05188 MutS domain II XACM_1279 PF05192 MutS domain III XACM_1283 PF03301 Tryptophan 2,3-dioxygenase XACM_1288 PF00672 HAMP domain XACM_1288 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1291 PF16355 Domain of unknown function (DUF4982) XACM_1291 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XACM_1291 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XACM_1291 PF00703 Glycosyl hydrolases family 2 XACM_1291 PF02837 Glycosyl hydrolases family 2, sugar binding domain XACM_1292 PF07745 Glycosyl hydrolase family 53 XACM_1294 PF06114 IrrE N-terminal-like domain XACM_1294 PF01381 Helix-turn-helix XACM_1294 PF09856 Predicted transcriptional regulator (DUF2083) XACM_1295 PF00171 Aldehyde dehydrogenase family XACM_1296 PF02770 Acyl-CoA dehydrogenase, middle domain XACM_1296 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_1296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_1297 PF00378 Enoyl-CoA hydratase/isomerase XACM_1298 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XACM_1298 PF00378 Enoyl-CoA hydratase/isomerase XACM_1298 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XACM_1299 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XACM_1299 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XACM_1300 PF01545 Cation efflux family XACM_1301 PF00378 Enoyl-CoA hydratase/isomerase XACM_1301 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XACM_1301 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XACM_1302 PF04542 Sigma-70 region 2 XACM_1302 PF08281 Sigma-70, region 4 XACM_1304 PF13180 PDZ domain XACM_1305 PF06421 GTP-binding protein LepA C-terminus XACM_1305 PF03144 Elongation factor Tu domain 2 XACM_1305 PF00009 Elongation factor Tu GTP binding domain XACM_1305 PF00679 Elongation factor G C-terminus XACM_1306 PF10502 Signal peptidase, peptidase S26 XACM_1308 PF00035 Double-stranded RNA binding motif XACM_1308 PF14622 Ribonuclease-III-like XACM_1309 PF07650 KH domain XACM_1309 PF01926 50S ribosome-binding GTPase XACM_1310 PF02565 Recombination protein O C terminal XACM_1310 PF11967 Recombination protein O N terminal XACM_1312 PF05958 tRNA (Uracil-5-)-methyltransferase XACM_1314 PF01323 DSBA-like thioredoxin domain XACM_1315 PF01593 Flavin containing amine oxidoreductase XACM_1316 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XACM_1317 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_1319 PF01048 Phosphorylase superfamily XACM_1320 PF00313 'Cold-shock' DNA-binding domain XACM_1321 PF01494 FAD binding domain XACM_1323 PF00270 DEAD/DEAH box helicase XACM_1323 PF08494 DEAD/H associated XACM_1323 PF00271 Helicase conserved C-terminal domain XACM_1324 PF04679 ATP dependent DNA ligase C terminal region XACM_1324 PF04675 DNA ligase N terminus XACM_1324 PF01068 ATP dependent DNA ligase domain XACM_1325 PF04679 ATP dependent DNA ligase C terminal region XACM_1325 PF04675 DNA ligase N terminus XACM_1325 PF01068 ATP dependent DNA ligase domain XACM_1328 PF00072 Response regulator receiver domain XACM_1328 PF00990 Diguanylate cyclase, GGDEF domain XACM_1332 PF02803 Thiolase, C-terminal domain XACM_1332 PF00108 Thiolase, N-terminal domain XACM_1333 PF03797 Autotransporter beta-domain XACM_1333 PF12951 Passenger-associated-transport-repeat XACM_1333 PF00082 Subtilase family XACM_1334 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XACM_1334 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XACM_1336 PF01863 Protein of unknown function DUF45 XACM_1337 PF07043 Protein of unknown function (DUF1328) XACM_1339 PF01258 Prokaryotic dksA/traR C4-type zinc finger XACM_1343 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XACM_1345 PF08274 PhnA Zinc-Ribbon XACM_1345 PF03831 PhnA domain XACM_1346 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XACM_1347 PF07690 Major Facilitator Superfamily XACM_1354 PF09924 Uncharacterised conserved protein (DUF2156) XACM_1354 PF03706 Lysylphosphatidylglycerol synthase TM region XACM_1356 PF01042 Endoribonuclease L-PSP XACM_1365 PF04542 Sigma-70 region 2 XACM_1365 PF04545 Sigma-70, region 4 XACM_1368 PF04060 Putative Fe-S cluster XACM_1370 PF09334 tRNA synthetases class I (M) XACM_1370 PF01588 Putative tRNA binding domain XACM_1374 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XACM_1377 PF00324 Amino acid permease XACM_1378 PF02574 Homocysteine S-methyltransferase XACM_1380 PF02592 Putative vitamin uptake transporter XACM_1386 PF03551 Transcriptional regulator PadR-like family XACM_1393 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XACM_1394 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XACM_1394 PF01336 OB-fold nucleic acid binding domain XACM_1394 PF07733 Bacterial DNA polymerase III alpha NTPase domain XACM_1394 PF02811 PHP domain XACM_1394 PF14579 Helix-hairpin-helix motif XACM_1396 PF01351 Ribonuclease HII XACM_1397 PF02684 Lipid-A-disaccharide synthetase XACM_1398 PF00132 Bacterial transferase hexapeptide (six repeats) XACM_1398 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XACM_1399 PF07977 FabA-like domain XACM_1400 PF00132 Bacterial transferase hexapeptide (six repeats) XACM_1400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XACM_1401 PF07244 Surface antigen variable number repeat XACM_1401 PF01103 Surface antigen XACM_1402 PF02163 Peptidase family M50 XACM_1402 PF17820 PDZ domain XACM_1403 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XACM_1403 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XACM_1403 PF13288 DXP reductoisomerase C-terminal domain XACM_1405 PF01255 Putative undecaprenyl diphosphate synthase XACM_1406 PF01765 Ribosome recycling factor XACM_1407 PF00696 Amino acid kinase family XACM_1408 PF00990 Diguanylate cyclase, GGDEF domain XACM_1408 PF00072 Response regulator receiver domain XACM_1409 PF00889 Elongation factor TS XACM_1410 PF00318 Ribosomal protein S2 XACM_1417 PF00557 Metallopeptidase family M24 XACM_1418 PF01909 Nucleotidyltransferase domain XACM_1418 PF08335 GlnD PII-uridylyltransferase XACM_1418 PF01966 HD domain XACM_1419 PF00132 Bacterial transferase hexapeptide (six repeats) XACM_1419 PF14602 Hexapeptide repeat of succinyl-transferase XACM_1419 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XACM_1420 PF03960 ArsC family XACM_1421 PF07687 Peptidase dimerisation domain XACM_1421 PF01546 Peptidase family M20/M25/M40 XACM_1422 PF00733 Asparagine synthase XACM_1422 PF13537 Glutamine amidotransferase domain XACM_1424 PF07715 TonB-dependent Receptor Plug Domain XACM_1424 PF00593 TonB dependent receptor XACM_1425 PF01804 Penicillin amidase XACM_1426 PF00210 Ferritin-like domain XACM_1427 PF05724 Thiopurine S-methyltransferase (TPMT) XACM_1428 PF03989 DNA gyrase C-terminal domain, beta-propeller XACM_1428 PF00521 DNA gyrase/topoisomerase IV, subunit A XACM_1431 PF02321 Outer membrane efflux protein XACM_1432 PF00529 HlyD membrane-fusion protein of T1SS XACM_1432 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_1433 PF07690 Major Facilitator Superfamily XACM_1437 PF07691 PA14 domain XACM_1437 PF01915 Glycosyl hydrolase family 3 C-terminal domain XACM_1437 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_1437 PF14310 Fibronectin type III-like domain XACM_1439 PF00854 POT family XACM_1444 PF12802 MarR family XACM_1445 PF01432 Peptidase family M3 XACM_1446 PF00255 Glutathione peroxidase XACM_1447 PF00175 Oxidoreductase NAD-binding domain XACM_1447 PF00970 Oxidoreductase FAD-binding domain XACM_1448 PF00005 ABC transporter XACM_1449 PF05681 Fumarate hydratase (Fumerase) XACM_1449 PF05683 Fumarase C-terminus XACM_1451 PF00484 Carbonic anhydrase XACM_1452 PF02253 Phospholipase A1 XACM_1454 PF00313 'Cold-shock' DNA-binding domain XACM_1457 PF00899 ThiF family XACM_1458 PF01026 TatD related DNase XACM_1461 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_1461 PF02770 Acyl-CoA dehydrogenase, middle domain XACM_1461 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_1463 PF02798 Glutathione S-transferase, N-terminal domain XACM_1463 PF00043 Glutathione S-transferase, C-terminal domain XACM_1464 PF13537 Glutamine amidotransferase domain XACM_1464 PF00733 Asparagine synthase XACM_1465 PF03358 NADPH-dependent FMN reductase XACM_1466 PF00772 DnaB-like helicase N terminal domain XACM_1466 PF03796 DnaB-like helicase C terminal domain XACM_1467 PF00875 DNA photolyase XACM_1467 PF03441 FAD binding domain of DNA photolyase XACM_1468 PF05736 OprF membrane domain XACM_1468 PF00691 OmpA family XACM_1469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_1469 PF03466 LysR substrate binding domain XACM_1471 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_1471 PF00529 HlyD membrane-fusion protein of T1SS XACM_1472 PF00873 AcrB/AcrD/AcrF family XACM_1473 PF00106 short chain dehydrogenase XACM_1474 PF02321 Outer membrane efflux protein XACM_1475 PF08448 PAS fold XACM_1475 PF00990 Diguanylate cyclase, GGDEF domain XACM_1477 PF00990 Diguanylate cyclase, GGDEF domain XACM_1483 PF01668 SmpB protein XACM_1484 PF03364 Polyketide cyclase / dehydrase and lipid transport XACM_1485 PF03658 RnfH family Ubiquitin XACM_1486 PF04355 SmpA / OmlA family XACM_1487 PF01475 Ferric uptake regulator family XACM_1488 PF02463 RecF/RecN/SMC N terminal domain XACM_1489 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XACM_1489 PF01628 HrcA protein C terminal domain XACM_1491 PF01025 GrpE XACM_1492 PF00012 Hsp70 protein XACM_1493 PF01556 DnaJ C terminal domain XACM_1493 PF00226 DnaJ domain XACM_1493 PF00684 DnaJ central domain XACM_1494 PF08543 Phosphomethylpyrimidine kinase XACM_1499 PF00664 ABC transporter transmembrane region XACM_1499 PF00005 ABC transporter XACM_1499 PF03412 Peptidase C39 family XACM_1500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_1500 PF03466 LysR substrate binding domain XACM_1501 PF00664 ABC transporter transmembrane region XACM_1501 PF00005 ABC transporter XACM_1502 PF01205 Uncharacterized protein family UPF0029 XACM_1503 PF03641 Possible lysine decarboxylase XACM_1504 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_1504 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XACM_1505 PF02817 e3 binding domain XACM_1505 PF00364 Biotin-requiring enzyme XACM_1505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XACM_1506 PF00676 Dehydrogenase E1 component XACM_1506 PF02779 Transketolase, pyrimidine binding domain XACM_1506 PF16078 2-oxoglutarate dehydrogenase N-terminus XACM_1506 PF16870 2-oxoglutarate dehydrogenase C-terminal XACM_1508 PF08007 Cupin superfamily protein XACM_1510 PF00206 Lyase XACM_1510 PF08328 Adenylosuccinate lyase C-terminal XACM_1512 PF00571 CBS domain XACM_1512 PF03471 Transporter associated domain XACM_1512 PF01595 Cyclin M transmembrane N-terminal domain XACM_1513 PF00206 Lyase XACM_1513 PF10415 Fumarase C C-terminus XACM_1518 PF00005 ABC transporter XACM_1519 PF00392 Bacterial regulatory proteins, gntR family XACM_1520 PF00255 Glutathione peroxidase XACM_1521 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XACM_1521 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XACM_1522 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XACM_1522 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XACM_1522 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XACM_1523 PF04102 SlyX XACM_1526 PF00356 Bacterial regulatory proteins, lacI family XACM_1527 PF07690 Major Facilitator Superfamily XACM_1528 PF00294 pfkB family carbohydrate kinase XACM_1530 PF02574 Homocysteine S-methyltransferase XACM_1530 PF00809 Pterin binding enzyme XACM_1530 PF02965 Vitamin B12 dependent methionine synthase, activation domain XACM_1530 PF02607 B12 binding domain XACM_1530 PF02310 B12 binding domain XACM_1531 PF02574 Homocysteine S-methyltransferase XACM_1531 PF00809 Pterin binding enzyme XACM_1532 PF01209 ubiE/COQ5 methyltransferase family XACM_1533 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_1533 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_1533 PF02770 Acyl-CoA dehydrogenase, middle domain XACM_1536 PF00773 RNB domain XACM_1536 PF08461 Ribonuclease R winged-helix domain XACM_1536 PF00575 S1 RNA binding domain XACM_1536 PF17876 Cold shock domain XACM_1536 PF08206 Ribonuclease B OB domain XACM_1538 PF00588 SpoU rRNA Methylase family XACM_1538 PF08032 RNA 2'-O ribose methyltransferase substrate binding XACM_1539 PF07694 5TMR of 5TMR-LYT XACM_1539 PF00990 Diguanylate cyclase, GGDEF domain XACM_1540 PF00929 Exonuclease XACM_1542 PF01895 PhoU domain XACM_1543 PF00005 ABC transporter XACM_1544 PF00528 Binding-protein-dependent transport system inner membrane component XACM_1545 PF00528 Binding-protein-dependent transport system inner membrane component XACM_1546 PF12849 PBP superfamily domain XACM_1547 PF12849 PBP superfamily domain XACM_1550 PF00484 Carbonic anhydrase XACM_1551 PF01740 STAS domain XACM_1551 PF00916 Sulfate permease family XACM_1552 PF00730 HhH-GPD superfamily base excision DNA repair protein XACM_1552 PF00633 Helix-hairpin-helix motif XACM_1552 PF10576 Iron-sulfur binding domain of endonuclease III XACM_1554 PF00378 Enoyl-CoA hydratase/isomerase XACM_1555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XACM_1555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XACM_1556 PF00293 NUDIX domain XACM_1557 PF00581 Rhodanese-like domain XACM_1563 PF00005 ABC transporter XACM_1563 PF12848 ABC transporter XACM_1564 PF02926 THUMP domain XACM_1564 PF10672 S-adenosylmethionine-dependent methyltransferase XACM_1564 PF01170 Putative RNA methylase family UPF0020 XACM_1565 PF01513 ATP-NAD kinase XACM_1568 PF00248 Aldo/keto reductase family XACM_1570 PF00929 Exonuclease XACM_1570 PF08411 Exonuclease C-terminal XACM_1572 PF01494 FAD binding domain XACM_1573 PF00266 Aminotransferase class-V XACM_1575 PF06052 3-hydroxyanthranilic acid dioxygenase XACM_1576 PF00484 Carbonic anhydrase XACM_1585 PF00072 Response regulator receiver domain XACM_1585 PF00196 Bacterial regulatory proteins, luxR family XACM_1590 PF00152 tRNA synthetases class II (D, K and N) XACM_1590 PF01336 OB-fold nucleic acid binding domain XACM_1591 PF01521 Iron-sulphur cluster biosynthesis XACM_1592 PF01250 Ribosomal protein S6 XACM_1593 PF01084 Ribosomal protein S18 XACM_1594 PF01281 Ribosomal protein L9, N-terminal domain XACM_1594 PF03948 Ribosomal protein L9, C-terminal domain XACM_1595 PF02463 RecF/RecN/SMC N terminal domain XACM_1596 PF04354 ZipA, C-terminal FtsZ-binding domain XACM_1598 PF00155 Aminotransferase class I and II XACM_1599 PF12826 Helix-hairpin-helix motif XACM_1599 PF01653 NAD-dependent DNA ligase adenylation domain XACM_1599 PF03120 NAD-dependent DNA ligase OB-fold domain XACM_1599 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XACM_1599 PF00533 BRCA1 C Terminus (BRCT) domain XACM_1600 PF00152 tRNA synthetases class II (D, K and N) XACM_1602 PF01008 Initiation factor 2 subunit family XACM_1603 PF03989 DNA gyrase C-terminal domain, beta-propeller XACM_1603 PF00521 DNA gyrase/topoisomerase IV, subunit A XACM_1604 PF13360 PQQ-like domain XACM_1606 PF17391 Urocanase N-terminal domain XACM_1606 PF17392 Urocanase C-terminal domain XACM_1606 PF01175 Urocanase Rossmann-like domain XACM_1608 PF00221 Aromatic amino acid lyase XACM_1609 PF07969 Amidohydrolase family XACM_1611 PF00392 Bacterial regulatory proteins, gntR family XACM_1611 PF07702 UTRA domain XACM_1616 PF01794 Ferric reductase like transmembrane component XACM_1617 PF00174 Oxidoreductase molybdopterin binding domain XACM_1618 PF00266 Aminotransferase class-V XACM_1619 PF01817 Chorismate mutase type II XACM_1619 PF00800 Prephenate dehydratase XACM_1619 PF01842 ACT domain XACM_1620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XACM_1622 PF03544 Gram-negative bacterial TonB protein C-terminal XACM_1623 PF02403 Seryl-tRNA synthetase N-terminal domain XACM_1623 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XACM_1624 PF02525 Flavodoxin-like fold XACM_1625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_1625 PF03466 LysR substrate binding domain XACM_1633 PF13683 Integrase core domain XACM_1633 PF13276 HTH-like domain XACM_1634 PF01527 Transposase XACM_1636 PF04002 RadC-like JAB domain XACM_1643 PF13276 HTH-like domain XACM_1643 PF13683 Integrase core domain XACM_1644 PF01527 Transposase XACM_1651 PF02481 DNA recombination-mediator protein A XACM_1651 PF17782 DprA winged helix domain XACM_1662 PF02534 Type IV secretory system Conjugative DNA transfer XACM_1666 PF00664 ABC transporter transmembrane region XACM_1666 PF00005 ABC transporter XACM_1666 PF03412 Peptidase C39 family XACM_1669 PF07690 Major Facilitator Superfamily XACM_1674 PF01527 Transposase XACM_1675 PF13683 Integrase core domain XACM_1675 PF13276 HTH-like domain XACM_1685 PF00672 HAMP domain XACM_1685 PF02203 Tar ligand binding domain homologue XACM_1685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1688 PF00512 His Kinase A (phospho-acceptor) domain XACM_1688 PF08448 PAS fold XACM_1688 PF13188 PAS domain XACM_1688 PF00072 Response regulator receiver domain XACM_1689 PF00072 Response regulator receiver domain XACM_1689 PF00486 Transcriptional regulatory protein, C terminal XACM_1690 PF06745 KaiC XACM_1691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1691 PF13426 PAS domain XACM_1691 PF00072 Response regulator receiver domain XACM_1693 PF03918 Cytochrome C biogenesis protein XACM_1694 PF08534 Redoxin XACM_1695 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XACM_1695 PF01578 Cytochrome C assembly protein XACM_1696 PF03100 CcmE XACM_1697 PF04995 Heme exporter protein D (CcmD) XACM_1698 PF01578 Cytochrome C assembly protein XACM_1699 PF00082 Subtilase family XACM_1701 PF04542 Sigma-70 region 2 XACM_1701 PF08281 Sigma-70, region 4 XACM_1704 PF00034 Cytochrome c XACM_1707 PF05523 WxcM-like, C-terminal XACM_1711 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XACM_1712 PF01943 Polysaccharide biosynthesis protein XACM_1713 PF01501 Glycosyl transferase family 8 XACM_1713 PF00535 Glycosyl transferase family 2 XACM_1716 PF08241 Methyltransferase domain XACM_1720 PF00534 Glycosyl transferases group 1 XACM_1720 PF13579 Glycosyl transferase 4-like domain XACM_1723 PF00005 ABC transporter XACM_1724 PF00664 ABC transporter transmembrane region XACM_1724 PF00005 ABC transporter XACM_1725 PF00083 Sugar (and other) transporter XACM_1726 PF00296 Luciferase-like monooxygenase XACM_1729 PF00571 CBS domain XACM_1729 PF01595 Cyclin M transmembrane N-terminal domain XACM_1729 PF03471 Transporter associated domain XACM_1732 PF01384 Phosphate transporter family XACM_1735 PF01751 Toprim domain XACM_1735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1735 PF00986 DNA gyrase B subunit, carboxyl terminus XACM_1735 PF00204 DNA gyrase B XACM_1737 PF06418 CTP synthase N-terminus XACM_1737 PF00117 Glutamine amidotransferase class-I XACM_1738 PF00793 DAHP synthetase I family XACM_1740 PF00113 Enolase, C-terminal TIM barrel domain XACM_1740 PF03952 Enolase, N-terminal domain XACM_1741 PF04977 Septum formation initiator XACM_1742 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XACM_1743 PF02542 YgbB family XACM_1744 PF01142 tRNA pseudouridine synthase D (TruD) XACM_1745 PF01713 Smr domain XACM_1746 PF01975 Survival protein SurE XACM_1748 PF09335 SNARE associated Golgi protein XACM_1749 PF01551 Peptidase family M23 XACM_1749 PF01476 LysM domain XACM_1750 PF04430 Protein of unknown function (DUF498/DUF598) XACM_1751 PF01985 CRS1 / YhbY (CRM) domain XACM_1752 PF01728 FtsJ-like methyltransferase XACM_1753 PF06480 FtsH Extracellular XACM_1753 PF01434 Peptidase family M41 XACM_1753 PF00004 ATPase family associated with various cellular activities (AAA) XACM_1753 PF17862 AAA+ lid domain XACM_1754 PF00809 Pterin binding enzyme XACM_1756 PF17209 Hfq protein XACM_1757 PF16360 GTP-binding GTPase Middle Region XACM_1757 PF13167 GTP-binding GTPase N-terminal XACM_1757 PF01926 50S ribosome-binding GTPase XACM_1758 PF02464 Competence-damaged protein XACM_1759 PF03109 ABC1 family XACM_1760 PF00717 Peptidase S24-like XACM_1760 PF01726 LexA DNA binding domain XACM_1761 PF00154 recA bacterial DNA recombination protein XACM_1763 PF02631 RecX family XACM_1764 PF01411 tRNA synthetases class II (A) XACM_1764 PF02272 DHHA1 domain XACM_1764 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XACM_1765 PF02599 Global regulator protein family XACM_1768 PF13426 PAS domain XACM_1768 PF08447 PAS fold XACM_1768 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1769 PF17954 Quercetinase C-terminal cupin domain XACM_1769 PF02678 Pirin XACM_1770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_1770 PF03466 LysR substrate binding domain XACM_1775 PF08543 Phosphomethylpyrimidine kinase XACM_1778 PF02562 PhoH-like protein XACM_1778 PF13638 PIN domain XACM_1779 PF00578 AhpC/TSA family XACM_1782 PF00701 Dihydrodipicolinate synthetase family XACM_1784 PF11953 Domain of unknown function (DUF3470) XACM_1784 PF00037 4Fe-4S binding domain XACM_1785 PF05035 2-keto-3-deoxy-galactonokinase XACM_1786 PF08450 SMP-30/Gluconolactonase/LRE-like region XACM_1787 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XACM_1787 PF13378 Enolase C-terminal domain-like XACM_1788 PF01081 KDPG and KHG aldolase XACM_1790 PF03466 LysR substrate binding domain XACM_1790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_1793 PF03442 Carbohydrate binding domain X2 XACM_1793 PF00942 Cellulose binding domain XACM_1796 PF17137 Domain of unknown function (DUF5110) XACM_1796 PF01055 Glycosyl hydrolases family 31 XACM_1796 PF16338 Domain of unknown function (DUF4968) XACM_1798 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XACM_1798 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XACM_1800 PF00083 Sugar (and other) transporter XACM_1804 PF01520 N-acetylmuramoyl-L-alanine amidase XACM_1805 PF02649 Type I GTP cyclohydrolase folE2 XACM_1807 PF12627 Probable RNA and SrmB- binding site of polymerase A XACM_1807 PF12626 Polymerase A arginine-rich C-terminus XACM_1807 PF01743 Poly A polymerase head domain XACM_1808 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XACM_1809 PF02548 Ketopantoate hydroxymethyltransferase XACM_1810 PF02569 Pantoate-beta-alanine ligase XACM_1811 PF02261 Aspartate decarboxylase XACM_1812 PF00342 Phosphoglucose isomerase XACM_1816 PF14310 Fibronectin type III-like domain XACM_1816 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_1816 PF01915 Glycosyl hydrolase family 3 C-terminal domain XACM_1817 PF00474 Sodium:solute symporter family XACM_1818 PF01590 GAF domain XACM_1818 PF00563 EAL domain XACM_1818 PF00990 Diguanylate cyclase, GGDEF domain XACM_1818 PF00360 Phytochrome region XACM_1819 PF02013 Cellulose or protein binding domain XACM_1819 PF00150 Cellulase (glycosyl hydrolase family 5) XACM_1820 PF00072 Response regulator receiver domain XACM_1822 PF04551 GcpE protein XACM_1823 PF01569 PAP2 superfamily XACM_1824 PF07690 Major Facilitator Superfamily XACM_1825 PF01177 Asp/Glu/Hydantoin racemase XACM_1827 PF01565 FAD binding domain XACM_1827 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XACM_1828 PF01180 Dihydroorotate dehydrogenase XACM_1831 PF00171 Aldehyde dehydrogenase family XACM_1836 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XACM_1836 PF17287 POTRA domain XACM_1836 PF08479 POTRA domain, ShlB-type XACM_1837 PF04829 Pre-toxin domain with VENN motif XACM_1837 PF05860 haemagglutination activity domain XACM_1837 PF05594 Haemagluttinin repeat XACM_1837 PF04829 Pre-toxin domain with VENN motif XACM_1837 PF15526 Novel toxin 21 XACM_1837 PF04829 Pre-toxin domain with VENN motif XACM_1837 PF15526 Novel toxin 21 XACM_1837 PF13332 Hemagglutinin repeat XACM_1837 PF05860 haemagglutination activity domain XACM_1837 PF13332 Hemagglutinin repeat XACM_1837 PF05594 Haemagluttinin repeat XACM_1837 PF05594 Haemagluttinin repeat XACM_1837 PF15526 Novel toxin 21 XACM_1837 PF13332 Hemagglutinin repeat XACM_1837 PF05860 haemagglutination activity domain XACM_1841 PF13683 Integrase core domain XACM_1841 PF13276 HTH-like domain XACM_1842 PF01527 Transposase XACM_1845 PF03073 TspO/MBR family XACM_1846 PF00696 Amino acid kinase family XACM_1846 PF01842 ACT domain XACM_1846 PF13840 ACT domain XACM_1846 PF03447 Homoserine dehydrogenase, NAD binding domain XACM_1846 PF00742 Homoserine dehydrogenase XACM_1847 PF00288 GHMP kinases N terminal domain XACM_1847 PF08544 GHMP kinases C terminal XACM_1849 PF00291 Pyridoxal-phosphate dependent enzyme XACM_1849 PF14821 Threonine synthase N terminus XACM_1851 PF00027 Cyclic nucleotide-binding domain XACM_1851 PF13545 Crp-like helix-turn-helix domain XACM_1852 PF03129 Anticodon binding domain XACM_1852 PF13393 Histidyl-tRNA synthetase XACM_1854 PF08029 HisG, C-terminal domain XACM_1854 PF01634 ATP phosphoribosyltransferase XACM_1855 PF00815 Histidinol dehydrogenase XACM_1856 PF00155 Aminotransferase class I and II XACM_1857 PF00475 Imidazoleglycerol-phosphate dehydratase XACM_1858 PF00117 Glutamine amidotransferase class-I XACM_1859 PF00977 Histidine biosynthesis protein XACM_1860 PF00977 Histidine biosynthesis protein XACM_1861 PF01502 Phosphoribosyl-AMP cyclohydrolase XACM_1861 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XACM_1865 PF03079 ARD/ARD' family XACM_1866 PF00596 Class II Aldolase and Adducin N-terminal domain XACM_1867 PF13520 Amino acid permease XACM_1868 PF13520 Amino acid permease XACM_1870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XACM_1870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XACM_1871 PF02913 FAD linked oxidases, C-terminal domain XACM_1871 PF01565 FAD binding domain XACM_1875 PF01132 Elongation factor P (EF-P) OB domain XACM_1875 PF08207 Elongation factor P (EF-P) KOW-like domain XACM_1875 PF09285 Elongation factor P, C-terminal XACM_1876 PF00106 short chain dehydrogenase XACM_1877 PF00682 HMGL-like XACM_1880 PF00378 Enoyl-CoA hydratase/isomerase XACM_1882 PF02421 Ferrous iron transport protein B XACM_1882 PF07664 Ferrous iron transport protein B C terminus XACM_1882 PF07670 Nucleoside recognition XACM_1885 PF00155 Aminotransferase class I and II XACM_1886 PF03475 3-alpha domain XACM_1886 PF03473 MOSC domain XACM_1887 PF05173 Dihydrodipicolinate reductase, C-terminus XACM_1887 PF01113 Dihydrodipicolinate reductase, N-terminus XACM_1888 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XACM_1888 PF00117 Glutamine amidotransferase class-I XACM_1890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XACM_1890 PF02142 MGS-like domain XACM_1890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XACM_1891 PF01272 Transcription elongation factor, GreA/GreB, C-term XACM_1891 PF03449 Transcription elongation factor, N-terminal XACM_1893 PF02272 DHHA1 domain XACM_1893 PF17768 RecJ OB domain XACM_1893 PF01368 DHH family XACM_1895 PF00072 Response regulator receiver domain XACM_1895 PF04397 LytTr DNA-binding domain XACM_1896 PF00472 RF-1 domain XACM_1896 PF03462 PCRF domain XACM_1897 PF01336 OB-fold nucleic acid binding domain XACM_1897 PF00152 tRNA synthetases class II (D, K and N) XACM_1898 PF00072 Response regulator receiver domain XACM_1899 PF01627 Hpt domain XACM_1899 PF00512 His Kinase A (phospho-acceptor) domain XACM_1899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1899 PF00072 Response regulator receiver domain XACM_1900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1900 PF00072 Response regulator receiver domain XACM_1900 PF01627 Hpt domain XACM_1900 PF00512 His Kinase A (phospho-acceptor) domain XACM_1901 PF00378 Enoyl-CoA hydratase/isomerase XACM_1902 PF13193 AMP-binding enzyme C-terminal domain XACM_1902 PF00501 AMP-binding enzyme XACM_1904 PF00330 Aconitase family (aconitate hydratase) XACM_1904 PF00694 Aconitase C-terminal domain XACM_1907 PF11791 Aconitate B N-terminal domain XACM_1907 PF06434 Aconitate hydratase 2 N-terminus XACM_1907 PF00330 Aconitase family (aconitate hydratase) XACM_1908 PF00561 alpha/beta hydrolase fold XACM_1909 PF00563 EAL domain XACM_1909 PF03707 Bacterial signalling protein N terminal repeat XACM_1909 PF00990 Diguanylate cyclase, GGDEF domain XACM_1910 PF00072 Response regulator receiver domain XACM_1910 PF01339 CheB methylesterase XACM_1911 PF03975 CheD chemotactic sensory transduction XACM_1912 PF03705 CheR methyltransferase, all-alpha domain XACM_1912 PF01739 CheR methyltransferase, SAM binding domain XACM_1913 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1913 PF02203 Tar ligand binding domain homologue XACM_1913 PF00672 HAMP domain XACM_1915 PF01584 CheW-like domain XACM_1916 PF07238 PilZ domain XACM_1916 PF07317 Flagellar regulator YcgR XACM_1918 PF00672 HAMP domain XACM_1918 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1918 PF02203 Tar ligand binding domain homologue XACM_1920 PF00672 HAMP domain XACM_1920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1920 PF02203 Tar ligand binding domain homologue XACM_1921 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1921 PF00672 HAMP domain XACM_1921 PF02203 Tar ligand binding domain homologue XACM_1922 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1922 PF02203 Tar ligand binding domain homologue XACM_1922 PF00672 HAMP domain XACM_1923 PF02203 Tar ligand binding domain homologue XACM_1923 PF00672 HAMP domain XACM_1923 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1925 PF00672 HAMP domain XACM_1925 PF02203 Tar ligand binding domain homologue XACM_1925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1926 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1926 PF02203 Tar ligand binding domain homologue XACM_1926 PF00672 HAMP domain XACM_1927 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1927 PF00672 HAMP domain XACM_1927 PF02203 Tar ligand binding domain homologue XACM_1929 PF00672 HAMP domain XACM_1929 PF02203 Tar ligand binding domain homologue XACM_1929 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1930 PF00672 HAMP domain XACM_1930 PF02203 Tar ligand binding domain homologue XACM_1932 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1932 PF00672 HAMP domain XACM_1932 PF02203 Tar ligand binding domain homologue XACM_1933 PF00672 HAMP domain XACM_1933 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_1933 PF02203 Tar ligand binding domain homologue XACM_1934 PF01584 CheW-like domain XACM_1934 PF02895 Signal transducing histidine kinase, homodimeric domain XACM_1934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1934 PF01627 Hpt domain XACM_1934 PF09078 CheY binding XACM_1935 PF00072 Response regulator receiver domain XACM_1937 PF01584 CheW-like domain XACM_1938 PF13614 AAA domain XACM_1939 PF00691 OmpA family XACM_1939 PF13677 Membrane MotB of proton-channel complex MotA/MotB XACM_1940 PF01618 MotA/TolQ/ExbB proton channel family XACM_1942 PF05598 Transposase domain (DUF772) XACM_1942 PF01609 Transposase DDE domain XACM_1951 PF02895 Signal transducing histidine kinase, homodimeric domain XACM_1951 PF01627 Hpt domain XACM_1951 PF07194 P2 response regulator binding domain XACM_1951 PF01584 CheW-like domain XACM_1951 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_1952 PF04344 Chemotaxis phosphatase, CheZ XACM_1953 PF00072 Response regulator receiver domain XACM_1954 PF04542 Sigma-70 region 2 XACM_1954 PF04539 Sigma-70 region 3 XACM_1954 PF04545 Sigma-70, region 4 XACM_1955 PF10609 NUBPL iron-transfer P-loop NTPase XACM_1956 PF00448 SRP54-type protein, GTPase domain XACM_1957 PF00771 FHIPEP family XACM_1958 PF01312 FlhB HrpN YscU SpaS Family XACM_1959 PF03707 Bacterial signalling protein N terminal repeat XACM_1959 PF00990 Diguanylate cyclase, GGDEF domain XACM_1959 PF00563 EAL domain XACM_1960 PF13188 PAS domain XACM_1960 PF03707 Bacterial signalling protein N terminal repeat XACM_1960 PF00563 EAL domain XACM_1960 PF00990 Diguanylate cyclase, GGDEF domain XACM_1962 PF13188 PAS domain XACM_1962 PF00563 EAL domain XACM_1962 PF00990 Diguanylate cyclase, GGDEF domain XACM_1962 PF03707 Bacterial signalling protein N terminal repeat XACM_1963 PF01311 Bacterial export proteins, family 1 XACM_1964 PF01313 Bacterial export proteins, family 3 XACM_1966 PF00813 FliP family XACM_1967 PF04347 Flagellar biosynthesis protein, FliO XACM_1968 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XACM_1969 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XACM_1969 PF02154 Flagellar motor switch protein FliM XACM_1973 PF18269 T3SS EscN ATPase C-terminal domain XACM_1973 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XACM_1975 PF14841 FliG middle domain XACM_1975 PF01706 FliG C-terminal domain XACM_1975 PF14842 FliG N-terminal domain XACM_1976 PF08345 Flagellar M-ring protein C-terminal XACM_1976 PF01514 Secretory protein of YscJ/FliF family XACM_1977 PF02049 Flagellar hook-basal body complex protein FliE XACM_1978 PF00534 Glycosyl transferases group 1 XACM_1978 PF00535 Glycosyl transferase family 2 XACM_1979 PF05050 Methyltransferase FkbM domain XACM_1980 PF02348 Cytidylyltransferase XACM_1988 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XACM_1988 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XACM_1990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XACM_1991 PF00072 Response regulator receiver domain XACM_1991 PF02954 Bacterial regulatory protein, Fis family XACM_1991 PF00158 Sigma-54 interaction domain XACM_1992 PF01339 CheB methylesterase XACM_1992 PF00072 Response regulator receiver domain XACM_1993 PF04552 Sigma-54, DNA binding domain XACM_1993 PF00309 Sigma-54 factor, Activator interacting domain (AID) XACM_1993 PF04963 Sigma-54 factor, core binding domain XACM_1994 PF00196 Bacterial regulatory proteins, luxR family XACM_1994 PF00072 Response regulator receiver domain XACM_1997 PF02561 Flagellar protein FliS XACM_1998 PF07195 Flagellar hook-associated protein 2 C-terminus XACM_1998 PF02465 Flagellar hook-associated protein 2 N-terminus XACM_1998 PF07196 Flagellin hook IN motif XACM_1999 PF00700 Bacterial flagellin C-terminal helical region XACM_1999 PF00669 Bacterial flagellin N-terminal helical region XACM_2000 PF00669 Bacterial flagellin N-terminal helical region XACM_2000 PF00700 Bacterial flagellin C-terminal helical region XACM_2001 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XACM_2001 PF07196 Flagellin hook IN motif XACM_2002 PF10135 Rod binding protein XACM_2002 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XACM_2003 PF02119 Flagellar P-ring protein XACM_2004 PF02107 Flagellar L-ring protein XACM_2005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XACM_2005 PF00460 Flagella basal body rod protein XACM_2007 PF00460 Flagella basal body rod protein XACM_2007 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XACM_2008 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XACM_2008 PF00460 Flagella basal body rod protein XACM_2008 PF07559 Flagellar basal body protein FlaE XACM_2009 PF03963 Flagellar hook capping protein - N-terminal region XACM_2010 PF00460 Flagella basal body rod protein XACM_2010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XACM_2012 PF01584 CheW-like domain XACM_2012 PF00072 Response regulator receiver domain XACM_2016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2016 PF13188 PAS domain XACM_2016 PF00989 PAS fold XACM_2016 PF00512 His Kinase A (phospho-acceptor) domain XACM_2016 PF13426 PAS domain XACM_2017 PF00990 Diguanylate cyclase, GGDEF domain XACM_2017 PF00563 EAL domain XACM_2017 PF03707 Bacterial signalling protein N terminal repeat XACM_2018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2018 PF07730 Histidine kinase XACM_2019 PF03707 Bacterial signalling protein N terminal repeat XACM_2019 PF00990 Diguanylate cyclase, GGDEF domain XACM_2019 PF00563 EAL domain XACM_2022 PF00672 HAMP domain XACM_2022 PF12729 Four helix bundle sensory module for signal transduction XACM_2022 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_2023 PF04356 Protein of unknown function (DUF489) XACM_2025 PF00293 NUDIX domain XACM_2026 PF02617 ATP-dependent Clp protease adaptor protein ClpS XACM_2027 PF00004 ATPase family associated with various cellular activities (AAA) XACM_2027 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_2027 PF02861 Clp amino terminal domain, pathogenicity island component XACM_2027 PF17871 AAA lid domain XACM_2027 PF07724 AAA domain (Cdc48 subfamily) XACM_2028 PF01176 Translation initiation factor 1A / IF-1 XACM_2029 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XACM_2032 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_2033 PF17854 FtsK alpha domain XACM_2033 PF01580 FtsK/SpoIIIE family XACM_2033 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XACM_2033 PF09397 Ftsk gamma domain XACM_2035 PF03548 Outer membrane lipoprotein carrier protein LolA XACM_2037 PF12002 MgsA AAA+ ATPase C terminal XACM_2037 PF00004 ATPase family associated with various cellular activities (AAA) XACM_2037 PF16193 AAA C-terminal domain XACM_2038 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XACM_2039 PF02803 Thiolase, C-terminal domain XACM_2039 PF00108 Thiolase, N-terminal domain XACM_2040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XACM_2040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XACM_2040 PF00378 Enoyl-CoA hydratase/isomerase XACM_2042 PF00334 Nucleoside diphosphate kinase XACM_2043 PF04055 Radical SAM superfamily XACM_2045 PF13464 Domain of unknown function (DUF4115) XACM_2047 PF13360 PQQ-like domain XACM_2047 PF01011 PQQ enzyme repeat XACM_2048 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XACM_2048 PF01926 50S ribosome-binding GTPase XACM_2049 PF03453 MoeA N-terminal region (domain I and II) XACM_2049 PF00994 Probable molybdopterin binding domain XACM_2049 PF03454 MoeA C-terminal region (domain IV) XACM_2050 PF00899 ThiF family XACM_2056 PF08240 Alcohol dehydrogenase GroES-like domain XACM_2056 PF13823 Alcohol dehydrogenase GroES-associated XACM_2056 PF00107 Zinc-binding dehydrogenase XACM_2059 PF03372 Endonuclease/Exonuclease/phosphatase family XACM_2061 PF03453 MoeA N-terminal region (domain I and II) XACM_2061 PF00994 Probable molybdopterin binding domain XACM_2061 PF03454 MoeA C-terminal region (domain IV) XACM_2062 PF12804 MobA-like NTP transferase domain XACM_2067 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XACM_2067 PF10414 Sirohaem synthase dimerisation region XACM_2067 PF14824 Sirohaem biosynthesis protein central XACM_2068 PF00072 Response regulator receiver domain XACM_2068 PF03861 ANTAR domain XACM_2070 PF07690 Major Facilitator Superfamily XACM_2071 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_2071 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XACM_2071 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XACM_2071 PF18267 Rubredoxin NAD+ reductase C-terminal domain XACM_2071 PF04324 BFD-like [2Fe-2S] binding domain XACM_2072 PF11723 Homotrimeric ring hydroxylase XACM_2072 PF00355 Rieske [2Fe-2S] domain XACM_2073 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XACM_2073 PF01568 Molydopterin dinucleotide binding domain XACM_2073 PF00384 Molybdopterin oxidoreductase XACM_2073 PF04324 BFD-like [2Fe-2S] binding domain XACM_2074 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XACM_2077 PF05974 Domain of unknown function (DUF892) XACM_2080 PF00563 EAL domain XACM_2080 PF00990 Diguanylate cyclase, GGDEF domain XACM_2080 PF08448 PAS fold XACM_2080 PF08447 PAS fold XACM_2081 PF12951 Passenger-associated-transport-repeat XACM_2082 PF00196 Bacterial regulatory proteins, luxR family XACM_2082 PF00072 Response regulator receiver domain XACM_2083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2083 PF00512 His Kinase A (phospho-acceptor) domain XACM_2083 PF08448 PAS fold XACM_2083 PF13426 PAS domain XACM_2083 PF00072 Response regulator receiver domain XACM_2085 PF00873 AcrB/AcrD/AcrF family XACM_2086 PF00529 HlyD membrane-fusion protein of T1SS XACM_2086 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_2087 PF03797 Autotransporter beta-domain XACM_2087 PF00082 Subtilase family XACM_2089 PF07694 5TMR of 5TMR-LYT XACM_2089 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2089 PF06580 Histidine kinase XACM_2090 PF00072 Response regulator receiver domain XACM_2090 PF04397 LytTr DNA-binding domain XACM_2091 PF00144 Beta-lactamase XACM_2093 PF07995 Glucose / Sorbosone dehydrogenase XACM_2094 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XACM_2100 PF05638 Type VI secretion system effector, Hcp XACM_2105 PF07724 AAA domain (Cdc48 subfamily) XACM_2105 PF00004 ATPase family associated with various cellular activities (AAA) XACM_2105 PF17871 AAA lid domain XACM_2105 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_2111 PF04717 Type VI secretion system, phage-baseplate injector XACM_2119 PF00069 Protein kinase domain XACM_2122 PF03466 LysR substrate binding domain XACM_2122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2123 PF00512 His Kinase A (phospho-acceptor) domain XACM_2123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2124 PF03150 Di-haem cytochrome c peroxidase XACM_2124 PF00034 Cytochrome c XACM_2125 PF00486 Transcriptional regulatory protein, C terminal XACM_2125 PF00072 Response regulator receiver domain XACM_2127 PF05199 GMC oxidoreductase XACM_2127 PF00732 GMC oxidoreductase XACM_2128 PF05598 Transposase domain (DUF772) XACM_2130 PF01527 Transposase XACM_2131 PF13276 HTH-like domain XACM_2131 PF13683 Integrase core domain XACM_2138 PF01526 Tn3 transposase DDE domain XACM_2138 PF13700 Domain of unknown function (DUF4158) XACM_2139 PF13406 Transglycosylase SLT domain XACM_2141 PF00561 alpha/beta hydrolase fold XACM_2142 PF01566 Natural resistance-associated macrophage protein XACM_2143 PF01325 Iron dependent repressor, N-terminal DNA binding domain XACM_2143 PF02742 Iron dependent repressor, metal binding and dimerisation domain XACM_2144 PF14437 MafB19-like deaminase XACM_2145 PF00929 Exonuclease XACM_2146 PF05552 Conserved TM helix XACM_2146 PF00924 Mechanosensitive ion channel XACM_2147 PF00391 PEP-utilising enzyme, mobile domain XACM_2147 PF02896 PEP-utilising enzyme, TIM barrel domain XACM_2147 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XACM_2148 PF03618 Kinase/pyrophosphorylase XACM_2152 PF01066 CDP-alcohol phosphatidyltransferase XACM_2154 PF00561 alpha/beta hydrolase fold XACM_2157 PF01266 FAD dependent oxidoreductase XACM_2157 PF00355 Rieske [2Fe-2S] domain XACM_2159 PF17674 HHH domain XACM_2159 PF00575 S1 RNA binding domain XACM_2159 PF09371 Tex-like protein N-terminal domain XACM_2159 PF16921 Tex protein YqgF-like domain XACM_2160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2160 PF09308 LuxQ, periplasmic XACM_2160 PF00072 Response regulator receiver domain XACM_2160 PF00512 His Kinase A (phospho-acceptor) domain XACM_2169 PF00034 Cytochrome c XACM_2171 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_2172 PF00873 AcrB/AcrD/AcrF family XACM_2173 PF00873 AcrB/AcrD/AcrF family XACM_2174 PF01081 KDPG and KHG aldolase XACM_2175 PF00920 Dehydratase family XACM_2176 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XACM_2177 PF02685 Glucokinase XACM_2178 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XACM_2178 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XACM_2179 PF00005 ABC transporter XACM_2179 PF17912 MalK OB fold domain XACM_2181 PF01571 Aminomethyltransferase folate-binding domain XACM_2182 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XACM_2183 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XACM_2184 PF02910 Fumarate reductase flavoprotein C-term XACM_2184 PF00890 FAD binding domain XACM_2186 PF13085 2Fe-2S iron-sulfur cluster binding domain XACM_2187 PF03937 Flavinator of succinate dehydrogenase XACM_2189 PF02687 FtsX-like permease family XACM_2189 PF12704 MacB-like periplasmic core domain XACM_2190 PF00005 ABC transporter XACM_2192 PF03772 Competence protein XACM_2192 PF00753 Metallo-beta-lactamase superfamily XACM_2193 PF01618 MotA/TolQ/ExbB proton channel family XACM_2195 PF00005 ABC transporter XACM_2195 PF00664 ABC transporter transmembrane region XACM_2196 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XACM_2197 PF02348 Cytidylyltransferase XACM_2198 PF01451 Low molecular weight phosphotyrosine protein phosphatase XACM_2200 PF01541 GIY-YIG catalytic domain XACM_2200 PF08459 UvrC Helix-hairpin-helix N-terminal XACM_2200 PF02151 UvrB/uvrC motif XACM_2201 PF01066 CDP-alcohol phosphatidyltransferase XACM_2206 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XACM_2206 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XACM_2206 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XACM_2208 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XACM_2211 PF00196 Bacterial regulatory proteins, luxR family XACM_2211 PF00072 Response regulator receiver domain XACM_2212 PF00575 S1 RNA binding domain XACM_2212 PF10150 Ribonuclease E/G family XACM_2212 PF12111 Polyribonucleotide phosphorylase C terminal XACM_2214 PF01479 S4 domain XACM_2214 PF00849 RNA pseudouridylate synthase XACM_2215 PF11737 Protein of unknown function (DUF3300) XACM_2216 PF02535 ZIP Zinc transporter XACM_2218 PF01329 Pterin 4 alpha carbinolamine dehydratase XACM_2219 PF01106 NifU-like domain XACM_2222 PF00529 HlyD membrane-fusion protein of T1SS XACM_2222 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_2223 PF00873 AcrB/AcrD/AcrF family XACM_2224 PF18665 Tetracyclin repressor-like, C-terminal domain XACM_2224 PF00440 Bacterial regulatory proteins, tetR family XACM_2226 PF06441 Epoxide hydrolase N terminus XACM_2232 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XACM_2232 PF02585 GlcNAc-PI de-N-acetylase XACM_2237 PF07730 Histidine kinase XACM_2237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2237 PF13492 GAF domain XACM_2237 PF13185 GAF domain XACM_2239 PF00072 Response regulator receiver domain XACM_2239 PF00196 Bacterial regulatory proteins, luxR family XACM_2240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2240 PF07730 Histidine kinase XACM_2242 PF13406 Transglycosylase SLT domain XACM_2243 PF01526 Tn3 transposase DDE domain XACM_2243 PF13700 Domain of unknown function (DUF4158) XACM_2248 PF00156 Phosphoribosyl transferase domain XACM_2251 PF05977 Transmembrane secretion effector XACM_2252 PF07969 Amidohydrolase family XACM_2254 PF00857 Isochorismatase family XACM_2255 PF07730 Histidine kinase XACM_2255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2257 PF00196 Bacterial regulatory proteins, luxR family XACM_2257 PF00072 Response regulator receiver domain XACM_2258 PF01526 Tn3 transposase DDE domain XACM_2258 PF13700 Domain of unknown function (DUF4158) XACM_2259 PF03601 Conserved hypothetical protein 698 XACM_2260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2260 PF03466 LysR substrate binding domain XACM_2263 PF00067 Cytochrome P450 XACM_2264 PF00111 2Fe-2S iron-sulfur cluster binding domain XACM_2265 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_2265 PF14759 Reductase C-terminal XACM_2266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2266 PF03466 LysR substrate binding domain XACM_2267 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XACM_2267 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus XACM_2267 PF00361 Proton-conducting membrane transporter XACM_2268 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XACM_2269 PF00248 Aldo/keto reductase family XACM_2270 PF03466 LysR substrate binding domain XACM_2270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2273 PF03352 Methyladenine glycosylase XACM_2281 PF00239 Resolvase, N terminal domain XACM_2281 PF02796 Helix-turn-helix domain of resolvase XACM_2288 PF17273 Family of unknown function (DUF5338) XACM_2294 PF00589 Phage integrase family XACM_2294 PF13356 Arm DNA-binding domain XACM_2295 PF00958 GMP synthase C terminal domain XACM_2295 PF00117 Glutamine amidotransferase class-I XACM_2295 PF02540 NAD synthase XACM_2296 PF00571 CBS domain XACM_2296 PF00478 IMP dehydrogenase / GMP reductase domain XACM_2297 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XACM_2297 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XACM_2299 PF00999 Sodium/hydrogen exchanger family XACM_2299 PF02254 TrkA-N domain XACM_2300 PF00483 Nucleotidyl transferase XACM_2301 PF02719 Polysaccharide biosynthesis protein XACM_2302 PF00953 Glycosyl transferase family 4 XACM_2303 PF18073 Rubredoxin metal binding domain XACM_2305 PF00216 Bacterial DNA-binding protein XACM_2306 PF00575 S1 RNA binding domain XACM_2307 PF02224 Cytidylate kinase XACM_2308 PF00444 Ribosomal protein L36 XACM_2310 PF04371 Porphyromonas-type peptidyl-arginine deiminase XACM_2311 PF00795 Carbon-nitrogen hydrolase XACM_2316 PF00528 Binding-protein-dependent transport system inner membrane component XACM_2317 PF00528 Binding-protein-dependent transport system inner membrane component XACM_2321 PF00356 Bacterial regulatory proteins, lacI family XACM_2323 PF03795 YCII-related domain XACM_2324 PF02616 Segregation and condensation protein ScpA XACM_2325 PF04079 Segregation and condensation complex subunit ScpB XACM_2326 PF01479 S4 domain XACM_2326 PF00849 RNA pseudouridylate synthase XACM_2329 PF00795 Carbon-nitrogen hydrolase XACM_2330 PF00155 Aminotransferase class I and II XACM_2331 PF00005 ABC transporter XACM_2332 PF03379 CcmB protein XACM_2333 PF01578 Cytochrome C assembly protein XACM_2335 PF03100 CcmE XACM_2336 PF01578 Cytochrome C assembly protein XACM_2336 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XACM_2337 PF08534 Redoxin XACM_2338 PF03918 Cytochrome C biogenesis protein XACM_2340 PF00561 alpha/beta hydrolase fold XACM_2341 PF00313 'Cold-shock' DNA-binding domain XACM_2342 PF00005 ABC transporter XACM_2342 PF00664 ABC transporter transmembrane region XACM_2343 PF00664 ABC transporter transmembrane region XACM_2343 PF00005 ABC transporter XACM_2344 PF01654 Cytochrome bd terminal oxidase subunit I XACM_2345 PF02322 Cytochrome bd terminal oxidase subunit II XACM_2349 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XACM_2349 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XACM_2351 PF00171 Aldehyde dehydrogenase family XACM_2352 PF01472 PUA domain XACM_2352 PF00696 Amino acid kinase family XACM_2354 PF00206 Lyase XACM_2355 PF01118 Semialdehyde dehydrogenase, NAD binding domain XACM_2357 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XACM_2357 PF00696 Amino acid kinase family XACM_2360 PF00764 Arginosuccinate synthase XACM_2361 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XACM_2361 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XACM_2363 PF01406 tRNA synthetases class I (C) catalytic domain XACM_2363 PF09190 DALR domain XACM_2364 PF02657 Fe-S metabolism associated domain XACM_2366 PF01258 Prokaryotic dksA/traR C4-type zinc finger XACM_2367 PF01809 Putative membrane protein insertion efficiency factor XACM_2368 PF01979 Amidohydrolase family XACM_2369 PF08460 Bacterial SH3 domain XACM_2369 PF01551 Peptidase family M23 XACM_2373 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XACM_2374 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XACM_2376 PF00753 Metallo-beta-lactamase superfamily XACM_2380 PF13419 Haloacid dehalogenase-like hydrolase XACM_2382 PF01979 Amidohydrolase family XACM_2384 PF01132 Elongation factor P (EF-P) OB domain XACM_2384 PF08207 Elongation factor P (EF-P) KOW-like domain XACM_2384 PF09285 Elongation factor P, C-terminal XACM_2385 PF04055 Radical SAM superfamily XACM_2386 PF03707 Bacterial signalling protein N terminal repeat XACM_2386 PF00563 EAL domain XACM_2386 PF00990 Diguanylate cyclase, GGDEF domain XACM_2386 PF13188 PAS domain XACM_2388 PF00588 SpoU rRNA Methylase family XACM_2389 PF00459 Inositol monophosphatase family XACM_2390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XACM_2390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XACM_2391 PF00545 ribonuclease XACM_2394 PF00271 Helicase conserved C-terminal domain XACM_2394 PF03880 DbpA RNA binding domain XACM_2394 PF00270 DEAD/DEAH box helicase XACM_2395 PF00156 Phosphoribosyl transferase domain XACM_2396 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XACM_2397 PF00135 Carboxylesterase family XACM_2398 PF02798 Glutathione S-transferase, N-terminal domain XACM_2398 PF14497 Glutathione S-transferase, C-terminal domain XACM_2399 PF00313 'Cold-shock' DNA-binding domain XACM_2401 PF07152 YaeQ protein XACM_2403 PF00990 Diguanylate cyclase, GGDEF domain XACM_2403 PF00563 EAL domain XACM_2403 PF00072 Response regulator receiver domain XACM_2404 PF01435 Peptidase family M48 XACM_2405 PF00749 tRNA synthetases class I (E and Q), catalytic domain XACM_2406 PF00106 short chain dehydrogenase XACM_2407 PF07879 PHB/PHA accumulation regulator DNA-binding domain XACM_2407 PF05233 PHB accumulation regulatory domain XACM_2410 PF01119 DNA mismatch repair protein, C-terminal domain XACM_2410 PF08676 MutL C terminal dimerisation domain XACM_2411 PF11741 AMIN domain XACM_2411 PF01520 N-acetylmuramoyl-L-alanine amidase XACM_2412 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XACM_2413 PF01256 Carbohydrate kinase XACM_2413 PF03853 YjeF-related protein N-terminus XACM_2414 PF08331 Domain of unknown function (DUF1730) XACM_2415 PF13742 OB-fold nucleic acid binding domain XACM_2415 PF02601 Exonuclease VII, large subunit XACM_2418 PF03781 Sulfatase-modifying factor enzyme 1 XACM_2419 PF00570 HRDC domain XACM_2419 PF01612 3'-5' exonuclease XACM_2420 PF01068 ATP dependent DNA ligase domain XACM_2420 PF13298 DNA polymerase Ligase (LigD) XACM_2420 PF04679 ATP dependent DNA ligase C terminal region XACM_2426 PF01584 CheW-like domain XACM_2427 PF02743 Cache domain XACM_2427 PF00672 HAMP domain XACM_2427 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_2428 PF02245 Methylpurine-DNA glycosylase (MPG) XACM_2429 PF08494 DEAD/H associated XACM_2429 PF00270 DEAD/DEAH box helicase XACM_2429 PF00271 Helicase conserved C-terminal domain XACM_2432 PF04386 Stringent starvation protein B XACM_2433 PF02798 Glutathione S-transferase, N-terminal domain XACM_2433 PF00043 Glutathione S-transferase, C-terminal domain XACM_2434 PF02167 Cytochrome C1 family XACM_2435 PF00033 Cytochrome b/b6/petB XACM_2435 PF00032 Cytochrome b(C-terminal)/b6/petD XACM_2436 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XACM_2436 PF00355 Rieske [2Fe-2S] domain XACM_2437 PF01464 Transglycosylase SLT domain XACM_2440 PF01938 TRAM domain XACM_2440 PF04055 Radical SAM superfamily XACM_2440 PF00919 Uncharacterized protein family UPF0004 XACM_2441 PF02562 PhoH-like protein XACM_2443 PF02130 Uncharacterized protein family UPF0054 XACM_2445 PF03471 Transporter associated domain XACM_2445 PF00571 CBS domain XACM_2448 PF00171 Aldehyde dehydrogenase family XACM_2449 PF00528 Binding-protein-dependent transport system inner membrane component XACM_2450 PF00528 Binding-protein-dependent transport system inner membrane component XACM_2451 PF08402 TOBE domain XACM_2451 PF00005 ABC transporter XACM_2452 PF02321 Outer membrane efflux protein XACM_2453 PF07690 Major Facilitator Superfamily XACM_2454 PF13533 Biotin-lipoyl like XACM_2455 PF13416 Bacterial extracellular solute-binding protein XACM_2456 PF00202 Aminotransferase class-III XACM_2457 PF00120 Glutamine synthetase, catalytic domain XACM_2458 PF07722 Peptidase C26 XACM_2459 PF00120 Glutamine synthetase, catalytic domain XACM_2460 PF01266 FAD dependent oxidoreductase XACM_2461 PF00072 Response regulator receiver domain XACM_2461 PF00990 Diguanylate cyclase, GGDEF domain XACM_2462 PF01814 Hemerythrin HHE cation binding domain XACM_2463 PF00083 Sugar (and other) transporter XACM_2463 PF07690 Major Facilitator Superfamily XACM_2465 PF00384 Molybdopterin oxidoreductase XACM_2466 PF02634 FdhD/NarQ family XACM_2467 PF07690 Major Facilitator Superfamily XACM_2468 PF00202 Aminotransferase class-III XACM_2470 PF04286 Protein of unknown function (DUF445) XACM_2471 PF00072 Response regulator receiver domain XACM_2471 PF01627 Hpt domain XACM_2471 PF00672 HAMP domain XACM_2471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2471 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XACM_2471 PF00512 His Kinase A (phospho-acceptor) domain XACM_2472 PF00072 Response regulator receiver domain XACM_2473 PF07690 Major Facilitator Superfamily XACM_2474 PF05088 Bacterial NAD-glutamate dehydrogenase XACM_2476 PF00529 HlyD membrane-fusion protein of T1SS XACM_2476 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_2477 PF00873 AcrB/AcrD/AcrF family XACM_2478 PF00356 Bacterial regulatory proteins, lacI family XACM_2479 PF00391 PEP-utilising enzyme, mobile domain XACM_2479 PF02896 PEP-utilising enzyme, TIM barrel domain XACM_2479 PF00381 PTS HPr component phosphorylation site XACM_2479 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XACM_2479 PF05524 PEP-utilising enzyme, N-terminal XACM_2480 PF00294 pfkB family carbohydrate kinase XACM_2481 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XACM_2487 PF13276 HTH-like domain XACM_2487 PF13683 Integrase core domain XACM_2488 PF01527 Transposase XACM_2490 PF02355 Protein export membrane protein XACM_2490 PF07549 SecD/SecF GG Motif XACM_2491 PF07549 SecD/SecF GG Motif XACM_2491 PF02355 Protein export membrane protein XACM_2491 PF13721 SecD export protein N-terminal TM region XACM_2492 PF02699 Preprotein translocase subunit XACM_2493 PF01702 Queuine tRNA-ribosyltransferase XACM_2494 PF02547 Queuosine biosynthesis protein XACM_2502 PF00759 Glycosyl hydrolase family 9 XACM_2502 PF02927 Cellulase N-terminal ig-like domain XACM_2504 PF00037 4Fe-4S binding domain XACM_2506 PF01467 Cytidylyltransferase-like XACM_2508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2508 PF00183 Hsp90 protein XACM_2512 PF00593 TonB dependent receptor XACM_2512 PF07715 TonB-dependent Receptor Plug Domain XACM_2514 PF04616 Glycosyl hydrolases family 43 XACM_2515 PF07532 Bacterial Ig-like domain (group 4) XACM_2516 PF07715 TonB-dependent Receptor Plug Domain XACM_2516 PF00593 TonB dependent receptor XACM_2518 PF00082 Subtilase family XACM_2518 PF09286 Pro-kumamolisin, activation domain XACM_2522 PF13520 Amino acid permease XACM_2525 PF00557 Metallopeptidase family M24 XACM_2525 PF01321 Creatinase/Prolidase N-terminal domain XACM_2526 PF00171 Aldehyde dehydrogenase family XACM_2527 PF00701 Dihydrodipicolinate synthetase family XACM_2528 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_2528 PF04324 BFD-like [2Fe-2S] binding domain XACM_2530 PF01266 FAD dependent oxidoreductase XACM_2531 PF05544 Proline racemase XACM_2533 PF02881 SRP54-type protein, helical bundle domain XACM_2533 PF00448 SRP54-type protein, GTPase domain XACM_2534 PF10576 Iron-sulfur binding domain of endonuclease III XACM_2534 PF00633 Helix-hairpin-helix motif XACM_2534 PF00730 HhH-GPD superfamily base excision DNA repair protein XACM_2534 PF14815 NUDIX domain XACM_2535 PF04362 Bacterial Fe(2+) trafficking XACM_2536 PF13426 PAS domain XACM_2536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2536 PF00072 Response regulator receiver domain XACM_2543 PF08212 Lipocalin-like domain XACM_2545 PF02770 Acyl-CoA dehydrogenase, middle domain XACM_2545 PF12806 Acetyl-CoA dehydrogenase C-terminal like XACM_2545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_2545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_2547 PF02779 Transketolase, pyrimidine binding domain XACM_2547 PF02780 Transketolase, C-terminal domain XACM_2547 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XACM_2551 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XACM_2552 PF00753 Metallo-beta-lactamase superfamily XACM_2552 PF16123 Hydroxyacylglutathione hydrolase C-terminus XACM_2553 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XACM_2553 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XACM_2556 PF03808 Glycosyl transferase WecB/TagA/CpsF family XACM_2559 PF14667 Polysaccharide biosynthesis C-terminal domain XACM_2561 PF00534 Glycosyl transferases group 1 XACM_2561 PF13439 Glycosyltransferase Family 4 XACM_2565 PF02397 Bacterial sugar transferase XACM_2569 PF13411 MerR HTH family regulatory protein XACM_2570 PF00216 Bacterial DNA-binding protein XACM_2571 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XACM_2571 PF01588 Putative tRNA binding domain XACM_2571 PF03147 Ferredoxin-fold anticodon binding domain XACM_2571 PF03484 tRNA synthetase B5 domain XACM_2571 PF03483 B3/4 domain XACM_2572 PF01409 tRNA synthetases class II core domain (F) XACM_2572 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XACM_2573 PF00453 Ribosomal protein L20 XACM_2574 PF01632 Ribosomal protein L35 XACM_2575 PF00707 Translation initiation factor IF-3, C-terminal domain XACM_2575 PF05198 Translation initiation factor IF-3, N-terminal domain XACM_2576 PF02824 TGS domain XACM_2576 PF03129 Anticodon binding domain XACM_2576 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XACM_2576 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XACM_2577 PF00356 Bacterial regulatory proteins, lacI family XACM_2578 PF00128 Alpha amylase, catalytic domain XACM_2578 PF00686 Starch binding domain XACM_2579 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XACM_2581 PF14508 Glycosyl-hydrolase 97 N-terminal XACM_2581 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XACM_2581 PF10566 Glycoside hydrolase 97 XACM_2583 PF00128 Alpha amylase, catalytic domain XACM_2588 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XACM_2589 PF04956 TrbC/VIRB2 family XACM_2590 PF01464 Transglycosylase SLT domain XACM_2591 PF00437 Type II/IV secretion system protein XACM_2596 PF02534 Type IV secretory system Conjugative DNA transfer XACM_2600 PF17757 UvrB interaction domain XACM_2600 PF00271 Helicase conserved C-terminal domain XACM_2600 PF12344 Ultra-violet resistance protein B XACM_2600 PF02151 UvrB/uvrC motif XACM_2600 PF04851 Type III restriction enzyme, res subunit XACM_2603 PF00114 Pilin (bacterial filament) XACM_2603 PF07963 Prokaryotic N-terminal methylation motif XACM_2604 PF05567 Neisseria PilC beta-propeller domain XACM_2609 PF06580 Histidine kinase XACM_2609 PF07694 5TMR of 5TMR-LYT XACM_2610 PF11892 Domain of unknown function (DUF3412) XACM_2610 PF03641 Possible lysine decarboxylase XACM_2610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XACM_2612 PF00593 TonB dependent receptor XACM_2613 PF01914 MarC family integral membrane protein XACM_2615 PF00462 Glutaredoxin XACM_2616 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XACM_2616 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XACM_2617 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XACM_2617 PF02222 ATP-grasp domain XACM_2618 PF00731 AIR carboxylase XACM_2620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XACM_2620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XACM_2622 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XACM_2622 PF01138 3' exoribonuclease family, domain 1 XACM_2622 PF00013 KH domain XACM_2622 PF00575 S1 RNA binding domain XACM_2622 PF03725 3' exoribonuclease family, domain 2 XACM_2623 PF00312 Ribosomal protein S15 XACM_2624 PF09157 Pseudouridine synthase II TruB, C-terminal XACM_2624 PF01509 TruB family pseudouridylate synthase (N terminal domain) XACM_2624 PF16198 tRNA pseudouridylate synthase B C-terminal domain XACM_2625 PF02033 Ribosome-binding factor A XACM_2626 PF00009 Elongation factor Tu GTP binding domain XACM_2626 PF11987 Translation-initiation factor 2 XACM_2626 PF08364 Bacterial translation initiation factor IF-2 associated region XACM_2626 PF04760 Translation initiation factor IF-2, N-terminal region XACM_2627 PF13184 NusA-like KH domain XACM_2627 PF08529 NusA N-terminal domain XACM_2627 PF00575 S1 RNA binding domain XACM_2628 PF17384 RimP C-terminal SH3 domain XACM_2628 PF02576 RimP N-terminal domain XACM_2630 PF00361 Proton-conducting membrane transporter XACM_2631 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XACM_2631 PF00361 Proton-conducting membrane transporter XACM_2632 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XACM_2632 PF00361 Proton-conducting membrane transporter XACM_2633 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XACM_2634 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XACM_2635 PF12838 4Fe-4S dicluster domain XACM_2636 PF00146 NADH dehydrogenase XACM_2637 PF00384 Molybdopterin oxidoreductase XACM_2637 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XACM_2637 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XACM_2638 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XACM_2638 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XACM_2638 PF10531 SLBB domain XACM_2640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XACM_2641 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XACM_2642 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XACM_2643 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XACM_2646 PF00121 Triosephosphate isomerase XACM_2647 PF00106 short chain dehydrogenase XACM_2650 PF00563 EAL domain XACM_2650 PF00990 Diguanylate cyclase, GGDEF domain XACM_2650 PF03707 Bacterial signalling protein N terminal repeat XACM_2654 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XACM_2654 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XACM_2654 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XACM_2654 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XACM_2655 PF17848 Acetyl-coA carboxylase zinc finger domain XACM_2655 PF01039 Carboxyl transferase domain XACM_2656 PF00290 Tryptophan synthase alpha chain XACM_2658 PF00291 Pyridoxal-phosphate dependent enzyme XACM_2659 PF03466 LysR substrate binding domain XACM_2659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2660 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XACM_2661 PF01416 tRNA pseudouridine synthase XACM_2664 PF02774 Semialdehyde dehydrogenase, dimerisation domain XACM_2664 PF01118 Semialdehyde dehydrogenase, NAD binding domain XACM_2665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XACM_2665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XACM_2666 PF01264 Chorismate synthase XACM_2667 PF05175 Methyltransferase small domain XACM_2668 PF02630 SCO1/SenC XACM_2669 PF02666 Phosphatidylserine decarboxylase XACM_2671 PF05872 Bacterial protein of unknown function (DUF853) XACM_2672 PF00293 NUDIX domain XACM_2675 PF01272 Transcription elongation factor, GreA/GreB, C-term XACM_2675 PF03449 Transcription elongation factor, N-terminal XACM_2676 PF04055 Radical SAM superfamily XACM_2676 PF18693 TRAM domain XACM_2676 PF00919 Uncharacterized protein family UPF0004 XACM_2677 PF01738 Dienelactone hydrolase family XACM_2681 PF00692 dUTPase XACM_2682 PF10609 NUBPL iron-transfer P-loop NTPase XACM_2683 PF07715 TonB-dependent Receptor Plug Domain XACM_2683 PF00593 TonB dependent receptor XACM_2686 PF01431 Peptidase family M13 XACM_2686 PF05649 Peptidase family M13 XACM_2687 PF01431 Peptidase family M13 XACM_2687 PF05649 Peptidase family M13 XACM_2691 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_2691 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XACM_2692 PF01266 FAD dependent oxidoreductase XACM_2693 PF04235 Protein of unknown function (DUF418) XACM_2694 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XACM_2695 PF00877 NlpC/P60 family XACM_2696 PF00877 NlpC/P60 family XACM_2698 PF13649 Methyltransferase domain XACM_2699 PF00375 Sodium:dicarboxylate symporter family XACM_2700 PF00245 Alkaline phosphatase XACM_2701 PF11734 TilS substrate C-terminal domain XACM_2701 PF09179 TilS substrate binding domain XACM_2701 PF01171 PP-loop family XACM_2702 PF02609 Exonuclease VII small subunit XACM_2703 PF00348 Polyprenyl synthetase XACM_2704 PF14521 Lysine-specific metallo-endopeptidase XACM_2706 PF01523 Putative modulator of DNA gyrase XACM_2707 PF04751 Protein of unknown function (DUF615) XACM_2708 PF01523 Putative modulator of DNA gyrase XACM_2710 PF13502 AsmA-like C-terminal region XACM_2710 PF13116 Protein of unknown function XACM_2711 PF10150 Ribonuclease E/G family XACM_2711 PF00575 S1 RNA binding domain XACM_2712 PF02545 Maf-like protein XACM_2713 PF04402 Protein of unknown function (DUF541) XACM_2716 PF02590 Predicted SPOUT methyltransferase XACM_2719 PF01467 Cytidylyltransferase-like XACM_2722 PF00133 tRNA synthetases class I (I, L, M and V) XACM_2722 PF08264 Anticodon-binding domain of tRNA XACM_2722 PF13603 Leucyl-tRNA synthetase, Domain 2 XACM_2724 PF00085 Thioredoxin XACM_2729 PF04070 Domain of unknown function (DUF378) XACM_2730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XACM_2732 PF03466 LysR substrate binding domain XACM_2732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2733 PF01022 Bacterial regulatory protein, arsR family XACM_2740 PF00005 ABC transporter XACM_2740 PF00664 ABC transporter transmembrane region XACM_2743 PF00873 AcrB/AcrD/AcrF family XACM_2746 PF02321 Outer membrane efflux protein XACM_2747 PF00072 Response regulator receiver domain XACM_2747 PF00486 Transcriptional regulatory protein, C terminal XACM_2748 PF00672 HAMP domain XACM_2748 PF00512 His Kinase A (phospho-acceptor) domain XACM_2748 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2749 PF00999 Sodium/hydrogen exchanger family XACM_2750 PF00144 Beta-lactamase XACM_2751 PF03737 Aldolase/RraA XACM_2754 PF00990 Diguanylate cyclase, GGDEF domain XACM_2754 PF08448 PAS fold XACM_2755 PF00849 RNA pseudouridylate synthase XACM_2755 PF01479 S4 domain XACM_2756 PF00563 EAL domain XACM_2756 PF00990 Diguanylate cyclase, GGDEF domain XACM_2756 PF08448 PAS fold XACM_2757 PF03880 DbpA RNA binding domain XACM_2757 PF00270 DEAD/DEAH box helicase XACM_2757 PF00271 Helicase conserved C-terminal domain XACM_2758 PF04545 Sigma-70, region 4 XACM_2758 PF04542 Sigma-70 region 2 XACM_2758 PF04539 Sigma-70 region 3 XACM_2767 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XACM_2767 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XACM_2769 PF00654 Voltage gated chloride channel XACM_2772 PF00593 TonB dependent receptor XACM_2772 PF07715 TonB-dependent Receptor Plug Domain XACM_2775 PF00082 Subtilase family XACM_2775 PF01483 Proprotein convertase P-domain XACM_2777 PF01483 Proprotein convertase P-domain XACM_2777 PF00082 Subtilase family XACM_2779 PF00248 Aldo/keto reductase family XACM_2780 PF07690 Major Facilitator Superfamily XACM_2781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2781 PF03466 LysR substrate binding domain XACM_2783 PF06719 AraC-type transcriptional regulator N-terminus XACM_2783 PF12833 Helix-turn-helix domain XACM_2785 PF03466 LysR substrate binding domain XACM_2785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_2787 PF00440 Bacterial regulatory proteins, tetR family XACM_2787 PF16859 Tetracyclin repressor-like, C-terminal domain XACM_2788 PF02321 Outer membrane efflux protein XACM_2789 PF00873 AcrB/AcrD/AcrF family XACM_2790 PF00529 HlyD membrane-fusion protein of T1SS XACM_2790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_2792 PF01475 Ferric uptake regulator family XACM_2793 PF00749 tRNA synthetases class I (E and Q), catalytic domain XACM_2798 PF06123 Inner membrane protein CreD XACM_2800 PF00512 His Kinase A (phospho-acceptor) domain XACM_2800 PF00672 HAMP domain XACM_2800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2801 PF00486 Transcriptional regulatory protein, C terminal XACM_2801 PF00072 Response regulator receiver domain XACM_2802 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XACM_2804 PF03461 TRCF domain XACM_2804 PF00271 Helicase conserved C-terminal domain XACM_2804 PF02559 CarD-like/TRCF domain XACM_2804 PF17757 UvrB interaction domain XACM_2804 PF00270 DEAD/DEAH box helicase XACM_2806 PF01584 CheW-like domain XACM_2806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2806 PF02895 Signal transducing histidine kinase, homodimeric domain XACM_2806 PF09078 CheY binding XACM_2806 PF01627 Hpt domain XACM_2807 PF02203 Tar ligand binding domain homologue XACM_2807 PF00672 HAMP domain XACM_2807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_2808 PF01584 CheW-like domain XACM_2809 PF00563 EAL domain XACM_2809 PF00990 Diguanylate cyclase, GGDEF domain XACM_2809 PF13426 PAS domain XACM_2810 PF01739 CheR methyltransferase, SAM binding domain XACM_2810 PF03705 CheR methyltransferase, all-alpha domain XACM_2811 PF00072 Response regulator receiver domain XACM_2811 PF01339 CheB methylesterase XACM_2812 PF13091 PLD-like domain XACM_2813 PF01431 Peptidase family M13 XACM_2813 PF05649 Peptidase family M13 XACM_2815 PF00300 Histidine phosphatase superfamily (branch 1) XACM_2816 PF04493 Endonuclease V XACM_2818 PF05726 Pirin C-terminal cupin domain XACM_2818 PF02678 Pirin XACM_2821 PF05726 Pirin C-terminal cupin domain XACM_2821 PF02678 Pirin XACM_2822 PF02554 Carbon starvation protein CstA XACM_2822 PF13722 5TM C-terminal transporter carbon starvation CstA XACM_2823 PF04328 Selenoprotein, putative XACM_2831 PF02625 XdhC and CoxI family XACM_2831 PF13478 XdhC Rossmann domain XACM_2832 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XACM_2832 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XACM_2833 PF00941 FAD binding domain in molybdopterin dehydrogenase XACM_2833 PF03450 CO dehydrogenase flavoprotein C-terminal domain XACM_2834 PF10518 TAT (twin-arginine translocation) pathway signal sequence XACM_2834 PF01799 [2Fe-2S] binding domain XACM_2834 PF00111 2Fe-2S iron-sulfur cluster binding domain XACM_2835 PF14765 Polyketide synthase dehydratase XACM_2835 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_2835 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_2835 PF16197 Ketoacyl-synthetase C-terminal extension XACM_2835 PF00107 Zinc-binding dehydrogenase XACM_2835 PF00698 Acyl transferase domain XACM_2835 PF08659 KR domain XACM_2835 PF08240 Alcohol dehydrogenase GroES-like domain XACM_2835 PF00550 Phosphopantetheine attachment site XACM_2836 PF00563 EAL domain XACM_2836 PF01590 GAF domain XACM_2836 PF00990 Diguanylate cyclase, GGDEF domain XACM_2836 PF00360 Phytochrome region XACM_2837 PF00436 Single-strand binding protein family XACM_2838 PF00348 Polyprenyl synthetase XACM_2840 PF08245 Mur ligase middle domain XACM_2840 PF02875 Mur ligase family, glutamate ligase domain XACM_2843 PF00696 Amino acid kinase family XACM_2843 PF01842 ACT domain XACM_2844 PF02567 Phenazine biosynthesis-like protein XACM_2845 PF02567 Phenazine biosynthesis-like protein XACM_2847 PF02566 OsmC-like protein XACM_2848 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XACM_2848 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XACM_2849 PF03652 Holliday junction resolvase XACM_2850 PF02622 Uncharacterized ACR, COG1678 XACM_2851 PF13673 Acetyltransferase (GNAT) domain XACM_2851 PF00958 GMP synthase C terminal domain XACM_2851 PF03352 Methyladenine glycosylase XACM_2851 PF13302 Acetyltransferase (GNAT) domain XACM_2851 PF00117 Glutamine amidotransferase class-I XACM_2854 PF00437 Type II/IV secretion system protein XACM_2855 PF00437 Type II/IV secretion system protein XACM_2856 PF01168 Alanine racemase, N-terminal domain XACM_2857 PF03807 NADP oxidoreductase coenzyme F420-dependent XACM_2857 PF14748 Pyrroline-5-carboxylate reductase dimerisation XACM_2859 PF01551 Peptidase family M23 XACM_2863 PF01965 DJ-1/PfpI family XACM_2865 PF02082 Transcriptional regulator XACM_2866 PF01458 Uncharacterized protein family (UPF0051) XACM_2867 PF00005 ABC transporter XACM_2868 PF01458 Uncharacterized protein family (UPF0051) XACM_2869 PF00266 Aminotransferase class-V XACM_2870 PF00583 Acetyltransferase (GNAT) family XACM_2871 PF00355 Rieske [2Fe-2S] domain XACM_2872 PF00593 TonB dependent receptor XACM_2872 PF07715 TonB-dependent Receptor Plug Domain XACM_2873 PF18331 PKHD-type hydroxylase C-terminal domain XACM_2873 PF13640 2OG-Fe(II) oxygenase superfamily XACM_2878 PF02424 ApbE family XACM_2879 PF00667 FAD binding domain XACM_2879 PF00175 Oxidoreductase NAD-binding domain XACM_2879 PF00258 Flavodoxin XACM_2886 PF01636 Phosphotransferase enzyme family XACM_2887 PF00483 Nucleotidyl transferase XACM_2888 PF00308 Bacterial dnaA protein XACM_2889 PF01594 AI-2E family transporter XACM_2891 PF02769 AIR synthase related protein, C-terminal domain XACM_2891 PF00586 AIR synthase related protein, N-terminal domain XACM_2893 PF00551 Formyl transferase XACM_2897 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XACM_2898 PF01722 BolA-like protein XACM_2899 PF01380 SIS domain XACM_2899 PF00571 CBS domain XACM_2902 PF03968 OstA-like protein XACM_2903 PF00005 ABC transporter XACM_2904 PF04552 Sigma-54, DNA binding domain XACM_2904 PF04963 Sigma-54 factor, core binding domain XACM_2904 PF00309 Sigma-54 factor, Activator interacting domain (AID) XACM_2905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XACM_2906 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XACM_2907 PF02603 HPr Serine kinase N terminus XACM_2907 PF07475 HPr Serine kinase C-terminal domain XACM_2908 PF03668 P-loop ATPase protein family XACM_2910 PF00381 PTS HPr component phosphorylation site XACM_2911 PF02896 PEP-utilising enzyme, TIM barrel domain XACM_2911 PF05524 PEP-utilising enzyme, N-terminal XACM_2911 PF00391 PEP-utilising enzyme, mobile domain XACM_2912 PF00571 CBS domain XACM_2912 PF01769 Divalent cation transporter XACM_2912 PF03448 MgtE intracellular N domain XACM_2913 PF00756 Putative esterase XACM_2914 PF02322 Cytochrome bd terminal oxidase subunit II XACM_2915 PF01654 Cytochrome bd terminal oxidase subunit I XACM_2917 PF00324 Amino acid permease XACM_2921 PF00561 alpha/beta hydrolase fold XACM_2922 PF00196 Bacterial regulatory proteins, luxR family XACM_2923 PF00324 Amino acid permease XACM_2928 PF12706 Beta-lactamase superfamily domain XACM_2934 PF00376 MerR family regulatory protein XACM_2934 PF09278 MerR, DNA binding XACM_2935 PF07690 Major Facilitator Superfamily XACM_2937 PF03738 Glutathionylspermidine synthase preATP-grasp XACM_2942 PF04012 PspA/IM30 family XACM_2944 PF01243 Pyridoxamine 5'-phosphate oxidase XACM_2944 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XACM_2945 PF01202 Shikimate kinase XACM_2946 PF01761 3-dehydroquinate synthase XACM_2948 PF01208 Uroporphyrinogen decarboxylase (URO-D) XACM_2949 PF07690 Major Facilitator Superfamily XACM_2950 PF01627 Hpt domain XACM_2950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2950 PF00512 His Kinase A (phospho-acceptor) domain XACM_2950 PF00072 Response regulator receiver domain XACM_2950 PF17149 Periplasmic sensor domain found in signal transduction proteins XACM_2950 PF00672 HAMP domain XACM_2951 PF00072 Response regulator receiver domain XACM_2951 PF01627 Hpt domain XACM_2951 PF00512 His Kinase A (phospho-acceptor) domain XACM_2951 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2951 PF00672 HAMP domain XACM_2951 PF17149 Periplasmic sensor domain found in signal transduction proteins XACM_2952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2952 PF00672 HAMP domain XACM_2952 PF00512 His Kinase A (phospho-acceptor) domain XACM_2952 PF17149 Periplasmic sensor domain found in signal transduction proteins XACM_2952 PF00072 Response regulator receiver domain XACM_2952 PF01627 Hpt domain XACM_2953 PF00072 Response regulator receiver domain XACM_2953 PF00512 His Kinase A (phospho-acceptor) domain XACM_2953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_2953 PF01627 Hpt domain XACM_2954 PF04264 YceI-like domain XACM_2958 PF03315 Serine dehydratase beta chain XACM_2958 PF03313 Serine dehydratase alpha chain XACM_2959 PF00561 alpha/beta hydrolase fold XACM_2960 PF03447 Homoserine dehydrogenase, NAD binding domain XACM_2960 PF00742 Homoserine dehydrogenase XACM_2960 PF00696 Amino acid kinase family XACM_2961 PF01053 Cys/Met metabolism PLP-dependent enzyme XACM_2962 PF00561 alpha/beta hydrolase fold XACM_2963 PF01476 LysM domain XACM_2963 PF01551 Peptidase family M23 XACM_2963 PF08525 Opacity-associated protein A N-terminal motif XACM_2964 PF00009 Elongation factor Tu GTP binding domain XACM_2964 PF16658 Class II release factor RF3, C-terminal domain XACM_2965 PF03006 Haemolysin-III related XACM_2966 PF05170 AsmA family XACM_2967 PF00571 CBS domain XACM_2967 PF00478 IMP dehydrogenase / GMP reductase domain XACM_2968 PF00535 Glycosyl transferase family 2 XACM_2969 PF00912 Transglycosylase XACM_2970 PF01430 Hsp33 protein XACM_2972 PF00593 TonB dependent receptor XACM_2972 PF07715 TonB-dependent Receptor Plug Domain XACM_2973 PF00440 Bacterial regulatory proteins, tetR family XACM_2974 PF00561 alpha/beta hydrolase fold XACM_2975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XACM_2975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XACM_2975 PF09317 Domain of unknown function (DUF1974) XACM_2980 PF01597 Glycine cleavage H-protein XACM_2981 PF08669 Glycine cleavage T-protein C-terminal barrel domain XACM_2981 PF01571 Aminomethyltransferase folate-binding domain XACM_2983 PF01145 SPFH domain / Band 7 family XACM_2983 PF16200 C-terminal region of band_7 XACM_2984 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XACM_2985 PF03819 MazG nucleotide pyrophosphohydrolase domain XACM_2986 PF00459 Inositol monophosphatase family XACM_2987 PF00293 NUDIX domain XACM_2988 PF00202 Aminotransferase class-III XACM_2989 PF04452 RNA methyltransferase XACM_2990 PF02685 Glucokinase XACM_2994 PF01476 LysM domain XACM_2994 PF00704 Glycosyl hydrolases family 18 XACM_2995 PF07691 PA14 domain XACM_2995 PF02838 Glycosyl hydrolase family 20, domain 2 XACM_2995 PF00728 Glycosyl hydrolase family 20, catalytic domain XACM_2997 PF07691 PA14 domain XACM_2997 PF01915 Glycosyl hydrolase family 3 C-terminal domain XACM_2997 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_2997 PF14310 Fibronectin type III-like domain XACM_2999 PF07971 Glycosyl hydrolase family 92 XACM_2999 PF17678 Glycosyl hydrolase family 92 N-terminal domain XACM_3000 PF01301 Glycosyl hydrolases family 35 XACM_3008 PF03932 CutC family XACM_3009 PF01112 Asparaginase XACM_3011 PF12034 Domain of unknown function (DUF3520) XACM_3011 PF00092 von Willebrand factor type A domain XACM_3011 PF12450 von Willebrand factor XACM_3012 PF08281 Sigma-70, region 4 XACM_3012 PF04542 Sigma-70 region 2 XACM_3014 PF13302 Acetyltransferase (GNAT) domain XACM_3017 PF00072 Response regulator receiver domain XACM_3017 PF01584 CheW-like domain XACM_3017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3017 PF01627 Hpt domain XACM_3018 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_3018 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XACM_3019 PF01584 CheW-like domain XACM_3020 PF00072 Response regulator receiver domain XACM_3021 PF00072 Response regulator receiver domain XACM_3022 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XACM_3022 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XACM_3024 PF03747 ADP-ribosylglycohydrolase XACM_3025 PF03747 ADP-ribosylglycohydrolase XACM_3026 PF00814 Glycoprotease family XACM_3027 PF04851 Type III restriction enzyme, res subunit XACM_3027 PF13307 Helicase C-terminal domain XACM_3029 PF14814 Bifunctional transglycosylase second domain XACM_3029 PF00912 Transglycosylase XACM_3029 PF00905 Penicillin binding protein transpeptidase domain XACM_3030 PF00535 Glycosyl transferase family 2 XACM_3032 PF04607 Region found in RelA / SpoT proteins XACM_3032 PF02824 TGS domain XACM_3032 PF13291 ACT domain XACM_3033 PF12706 Beta-lactamase superfamily domain XACM_3034 PF03070 TENA/THI-4/PQQC family XACM_3035 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XACM_3036 PF04055 Radical SAM superfamily XACM_3036 PF13186 Iron-sulfur cluster-binding domain XACM_3040 PF02685 Glucokinase XACM_3042 PF04408 Helicase associated domain (HA2) XACM_3042 PF11898 Domain of unknown function (DUF3418) XACM_3042 PF00271 Helicase conserved C-terminal domain XACM_3042 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XACM_3042 PF00270 DEAD/DEAH box helicase XACM_3043 PF00210 Ferritin-like domain XACM_3044 PF00570 HRDC domain XACM_3044 PF16124 RecQ zinc-binding XACM_3044 PF09382 RQC domain XACM_3044 PF00270 DEAD/DEAH box helicase XACM_3044 PF00271 Helicase conserved C-terminal domain XACM_3049 PF01479 S4 domain XACM_3049 PF00849 RNA pseudouridylate synthase XACM_3051 PF00672 HAMP domain XACM_3051 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_3051 PF02203 Tar ligand binding domain homologue XACM_3055 PF13426 PAS domain XACM_3055 PF13581 Histidine kinase-like ATPase domain XACM_3055 PF07536 HWE histidine kinase XACM_3056 PF06508 Queuosine biosynthesis protein QueC XACM_3058 PF04055 Radical SAM superfamily XACM_3060 PF00691 OmpA family XACM_3061 PF07676 WD40-like Beta Propeller Repeat XACM_3061 PF04052 TolB amino-terminal domain XACM_3063 PF02472 Biopolymer transport protein ExbD/TolR XACM_3064 PF01618 MotA/TolQ/ExbB proton channel family XACM_3065 PF03061 Thioesterase superfamily XACM_3066 PF05491 RuvB C-terminal winged helix domain XACM_3066 PF05496 Holliday junction DNA helicase RuvB P-loop domain XACM_3066 PF17864 RuvB AAA lid domain XACM_3068 PF02705 K+ potassium transporter XACM_3069 PF01330 RuvA N terminal domain XACM_3069 PF07499 RuvA, C-terminal domain XACM_3070 PF02075 Crossover junction endodeoxyribonuclease RuvC XACM_3071 PF01709 Transcriptional regulator XACM_3074 PF00152 tRNA synthetases class II (D, K and N) XACM_3074 PF02938 GAD domain XACM_3074 PF01336 OB-fold nucleic acid binding domain XACM_3077 PF07690 Major Facilitator Superfamily XACM_3079 PF05506 Domain of unknown function (DUF756) XACM_3079 PF04185 Phosphoesterase family XACM_3080 PF13472 GDSL-like Lipase/Acylhydrolase family XACM_3080 PF07859 alpha/beta hydrolase fold XACM_3082 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3082 PF03466 LysR substrate binding domain XACM_3084 PF00005 ABC transporter XACM_3084 PF12848 ABC transporter XACM_3085 PF07715 TonB-dependent Receptor Plug Domain XACM_3085 PF00593 TonB dependent receptor XACM_3087 PF00593 TonB dependent receptor XACM_3087 PF07715 TonB-dependent Receptor Plug Domain XACM_3088 PF00593 TonB dependent receptor XACM_3088 PF07715 TonB-dependent Receptor Plug Domain XACM_3090 PF02254 TrkA-N domain XACM_3090 PF00999 Sodium/hydrogen exchanger family XACM_3092 PF07715 TonB-dependent Receptor Plug Domain XACM_3092 PF00593 TonB dependent receptor XACM_3092 PF07660 Secretin and TonB N terminus short domain XACM_3094 PF04183 IucA / IucC family XACM_3094 PF06276 Ferric iron reductase FhuF-like transporter XACM_3095 PF07690 Major Facilitator Superfamily XACM_3097 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XACM_3097 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XACM_3099 PF02654 Cobalamin-5-phosphate synthase XACM_3101 PF02277 Phosphoribosyltransferase XACM_3102 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XACM_3103 PF07685 CobB/CobQ-like glutamine amidotransferase domain XACM_3103 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XACM_3104 PF17113 Regulatory signalling modulator protein AmpE XACM_3104 PF03186 CobD/Cbib protein XACM_3105 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XACM_3105 PF12557 Cob(I)alamin adenosyltransferase N terminal XACM_3108 PF07715 TonB-dependent Receptor Plug Domain XACM_3108 PF00593 TonB dependent receptor XACM_3109 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_3109 PF02861 Clp amino terminal domain, pathogenicity island component XACM_3109 PF07724 AAA domain (Cdc48 subfamily) XACM_3109 PF00004 ATPase family associated with various cellular activities (AAA) XACM_3109 PF17871 AAA lid domain XACM_3110 PF00005 ABC transporter XACM_3111 PF01541 GIY-YIG catalytic domain XACM_3118 PF07715 TonB-dependent Receptor Plug Domain XACM_3118 PF00593 TonB dependent receptor XACM_3119 PF02358 Trehalose-phosphatase XACM_3120 PF00723 Glycosyl hydrolases family 15 XACM_3121 PF00982 Glycosyltransferase family 20 XACM_3123 PF02203 Tar ligand binding domain homologue XACM_3123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_3123 PF00672 HAMP domain XACM_3124 PF04134 Protein of unknown function, DUF393 XACM_3127 PF00849 RNA pseudouridylate synthase XACM_3128 PF13525 Outer membrane lipoprotein XACM_3130 PF00795 Carbon-nitrogen hydrolase XACM_3130 PF02540 NAD synthase XACM_3133 PF02629 CoA binding domain XACM_3133 PF00549 CoA-ligase XACM_3134 PF00549 CoA-ligase XACM_3134 PF08442 ATP-grasp domain XACM_3135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3135 PF00512 His Kinase A (phospho-acceptor) domain XACM_3136 PF00158 Sigma-54 interaction domain XACM_3136 PF00072 Response regulator receiver domain XACM_3136 PF02954 Bacterial regulatory protein, Fis family XACM_3137 PF00437 Type II/IV secretion system protein XACM_3137 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XACM_3138 PF07963 Prokaryotic N-terminal methylation motif XACM_3138 PF00114 Pilin (bacterial filament) XACM_3139 PF00482 Type II secretion system (T2SS), protein F XACM_3140 PF06750 Bacterial Peptidase A24 N-terminal domain XACM_3140 PF01478 Type IV leader peptidase family XACM_3141 PF01121 Dephospho-CoA kinase XACM_3142 PF11808 Phosphate regulon sensor protein PhoR XACM_3142 PF00512 His Kinase A (phospho-acceptor) domain XACM_3142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3142 PF00989 PAS fold XACM_3143 PF00072 Response regulator receiver domain XACM_3143 PF00486 Transcriptional regulatory protein, C terminal XACM_3145 PF08443 RimK-like ATP-grasp domain XACM_3145 PF18030 RimK PreATP-grasp domain XACM_3146 PF00128 Alpha amylase, catalytic domain XACM_3146 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XACM_3165 PF12462 DNA helicase IV / RNA helicase N terminal XACM_3165 PF13361 UvrD-like helicase C-terminal domain XACM_3165 PF00580 UvrD/REP helicase N-terminal domain XACM_3174 PF04002 RadC-like JAB domain XACM_3186 PF01527 Transposase XACM_3187 PF13683 Integrase core domain XACM_3187 PF13276 HTH-like domain XACM_3194 PF03797 Autotransporter beta-domain XACM_3194 PF00657 GDSL-like Lipase/Acylhydrolase XACM_3196 PF05690 Thiazole biosynthesis protein ThiG XACM_3197 PF02390 Putative methyltransferase XACM_3198 PF03600 Citrate transporter XACM_3198 PF02080 TrkA-C domain XACM_3201 PF01557 Fumarylacetoacetate (FAA) hydrolase family XACM_3202 PF01741 Large-conductance mechanosensitive channel, MscL XACM_3204 PF00356 Bacterial regulatory proteins, lacI family XACM_3206 PF02837 Glycosyl hydrolases family 2, sugar binding domain XACM_3206 PF00703 Glycosyl hydrolases family 2 XACM_3206 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain XACM_3207 PF10566 Glycoside hydrolase 97 XACM_3207 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XACM_3207 PF14508 Glycosyl-hydrolase 97 N-terminal XACM_3209 PF00135 Carboxylesterase family XACM_3210 PF00588 SpoU rRNA Methylase family XACM_3210 PF08032 RNA 2'-O ribose methyltransferase substrate binding XACM_3213 PF11838 ERAP1-like C-terminal domain XACM_3213 PF01433 Peptidase family M1 domain XACM_3214 PF00873 AcrB/AcrD/AcrF family XACM_3215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_3215 PF00529 HlyD membrane-fusion protein of T1SS XACM_3217 PF00009 Elongation factor Tu GTP binding domain XACM_3218 PF01507 Phosphoadenosine phosphosulfate reductase family XACM_3219 PF00258 Flavodoxin XACM_3219 PF00667 FAD binding domain XACM_3219 PF00175 Oxidoreductase NAD-binding domain XACM_3220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XACM_3220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XACM_3221 PF01507 Phosphoadenosine phosphosulfate reductase family XACM_3225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3225 PF00512 His Kinase A (phospho-acceptor) domain XACM_3225 PF00072 Response regulator receiver domain XACM_3225 PF01627 Hpt domain XACM_3228 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3228 PF03466 LysR substrate binding domain XACM_3229 PF14824 Sirohaem biosynthesis protein central XACM_3229 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XACM_3229 PF10414 Sirohaem synthase dimerisation region XACM_3230 PF00291 Pyridoxal-phosphate dependent enzyme XACM_3232 PF01661 Macro domain XACM_3233 PF00274 Fructose-bisphosphate aldolase class-I XACM_3235 PF00224 Pyruvate kinase, barrel domain XACM_3235 PF02887 Pyruvate kinase, alpha/beta domain XACM_3237 PF00162 Phosphoglycerate kinase XACM_3241 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XACM_3241 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XACM_3244 PF03922 OmpW family XACM_3245 PF03922 OmpW family XACM_3247 PF04273 Putative phosphatase (DUF442) XACM_3247 PF00753 Metallo-beta-lactamase superfamily XACM_3249 PF00528 Binding-protein-dependent transport system inner membrane component XACM_3250 PF00005 ABC transporter XACM_3250 PF03459 TOBE domain XACM_3257 PF01476 LysM domain XACM_3257 PF03734 L,D-transpeptidase catalytic domain XACM_3258 PF01551 Peptidase family M23 XACM_3258 PF04225 Opacity-associated protein A LysM-like domain XACM_3259 PF00593 TonB dependent receptor XACM_3259 PF07715 TonB-dependent Receptor Plug Domain XACM_3260 PF00456 Transketolase, thiamine diphosphate binding domain XACM_3260 PF02779 Transketolase, pyrimidine binding domain XACM_3260 PF02780 Transketolase, C-terminal domain XACM_3261 PF00375 Sodium:dicarboxylate symporter family XACM_3264 PF00092 von Willebrand factor type A domain XACM_3264 PF07584 Aerotolerance regulator N-terminal XACM_3268 PF07726 ATPase family associated with various cellular activities (AAA) XACM_3268 PF17863 AAA lid domain XACM_3269 PF07660 Secretin and TonB N terminus short domain XACM_3269 PF03958 Bacterial type II/III secretion system short domain XACM_3269 PF00263 Bacterial type II and III secretion system protein XACM_3269 PF11741 AMIN domain XACM_3274 PF00905 Penicillin binding protein transpeptidase domain XACM_3274 PF17092 Penicillin-binding protein OB-like domain XACM_3274 PF00912 Transglycosylase XACM_3276 PF00285 Citrate synthase, C-terminal domain XACM_3277 PF01197 Ribosomal protein L31 XACM_3278 PF01156 Inosine-uridine preferring nucleoside hydrolase XACM_3279 PF00270 DEAD/DEAH box helicase XACM_3279 PF17191 RecG wedge domain XACM_3279 PF00271 Helicase conserved C-terminal domain XACM_3280 PF01042 Endoribonuclease L-PSP XACM_3281 PF13291 ACT domain XACM_3281 PF02824 TGS domain XACM_3281 PF04607 Region found in RelA / SpoT proteins XACM_3282 PF01192 RNA polymerase Rpb6 XACM_3283 PF00625 Guanylate kinase XACM_3284 PF08340 Domain of unknown function (DUF1732) XACM_3284 PF03755 YicC-like family, N-terminal region XACM_3285 PF01138 3' exoribonuclease family, domain 1 XACM_3285 PF03725 3' exoribonuclease family, domain 2 XACM_3287 PF01725 Ham1 family XACM_3288 PF06969 HemN C-terminal domain XACM_3288 PF04055 Radical SAM superfamily XACM_3291 PF00557 Metallopeptidase family M24 XACM_3293 PF00557 Metallopeptidase family M24 XACM_3293 PF05195 Aminopeptidase P, N-terminal domain XACM_3294 PF03695 Uncharacterised protein family (UPF0149) XACM_3296 PF05164 Cell division protein ZapA XACM_3297 PF01812 5-formyltetrahydrofolate cyclo-ligase family XACM_3299 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XACM_3301 PF13369 Transglutaminase-like superfamily XACM_3302 PF00301 Rubredoxin XACM_3303 PF02581 Thiamine monophosphate synthase XACM_3307 PF00202 Aminotransferase class-III XACM_3308 PF17874 MalT-like TPR region XACM_3308 PF00196 Bacterial regulatory proteins, luxR family XACM_3309 PF00127 Copper binding proteins, plastocyanin/azurin family XACM_3310 PF00155 Aminotransferase class I and II XACM_3312 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XACM_3312 PF00034 Cytochrome c XACM_3313 PF01593 Flavin containing amine oxidoreductase XACM_3316 PF00202 Aminotransferase class-III XACM_3317 PF00027 Cyclic nucleotide-binding domain XACM_3317 PF00520 Ion transport protein XACM_3320 PF01569 PAP2 superfamily XACM_3322 PF01062 Bestrophin, RFP-TM, chloride channel XACM_3325 PF08245 Mur ligase middle domain XACM_3325 PF02875 Mur ligase family, glutamate ligase domain XACM_3325 PF01225 Mur ligase family, catalytic domain XACM_3327 PF00365 Phosphofructokinase XACM_3329 PF03030 Inorganic H+ pyrophosphatase XACM_3332 PF00719 Inorganic pyrophosphatase XACM_3335 PF07715 TonB-dependent Receptor Plug Domain XACM_3335 PF00593 TonB dependent receptor XACM_3336 PF12833 Helix-turn-helix domain XACM_3337 PF00486 Transcriptional regulatory protein, C terminal XACM_3337 PF18500 CadC C-terminal domain 1 XACM_3338 PF13667 ThiC-associated domain XACM_3338 PF01964 Radical SAM ThiC family XACM_3339 PF07715 TonB-dependent Receptor Plug Domain XACM_3339 PF00593 TonB dependent receptor XACM_3340 PF00672 HAMP domain XACM_3340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XACM_3343 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XACM_3343 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XACM_3344 PF00205 Thiamine pyrophosphate enzyme, central domain XACM_3344 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XACM_3344 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XACM_3346 PF00291 Pyridoxal-phosphate dependent enzyme XACM_3347 PF08502 LeuA allosteric (dimerisation) domain XACM_3347 PF00682 HMGL-like XACM_3348 PF00180 Isocitrate/isopropylmalate dehydrogenase XACM_3349 PF00694 Aconitase C-terminal domain XACM_3350 PF00330 Aconitase family (aconitate hydratase) XACM_3351 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3352 PF00990 Diguanylate cyclase, GGDEF domain XACM_3352 PF17151 Periplasmic sensor domain XACM_3355 PF02321 Outer membrane efflux protein XACM_3356 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XACM_3357 PF03279 Bacterial lipid A biosynthesis acyltransferase XACM_3362 PF03949 Malic enzyme, NAD binding domain XACM_3362 PF01515 Phosphate acetyl/butaryl transferase XACM_3362 PF00390 Malic enzyme, N-terminal domain XACM_3363 PF00375 Sodium:dicarboxylate symporter family XACM_3365 PF02743 Cache domain XACM_3365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3365 PF00512 His Kinase A (phospho-acceptor) domain XACM_3366 PF07690 Major Facilitator Superfamily XACM_3368 PF03466 LysR substrate binding domain XACM_3368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3369 PF00248 Aldo/keto reductase family XACM_3372 PF00072 Response regulator receiver domain XACM_3372 PF00196 Bacterial regulatory proteins, luxR family XACM_3374 PF08521 Two-component sensor kinase N-terminal XACM_3374 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3374 PF00512 His Kinase A (phospho-acceptor) domain XACM_3375 PF00486 Transcriptional regulatory protein, C terminal XACM_3375 PF00072 Response regulator receiver domain XACM_3377 PF03600 Citrate transporter XACM_3378 PF00106 short chain dehydrogenase XACM_3379 PF00356 Bacterial regulatory proteins, lacI family XACM_3382 PF00128 Alpha amylase, catalytic domain XACM_3385 PF03193 RsgA GTPase XACM_3391 PF03412 Peptidase C39 family XACM_3391 PF00005 ABC transporter XACM_3391 PF00664 ABC transporter transmembrane region XACM_3392 PF00155 Aminotransferase class I and II XACM_3395 PF01522 Polysaccharide deacetylase XACM_3396 PF00462 Glutaredoxin XACM_3399 PF01979 Amidohydrolase family XACM_3400 PF01979 Amidohydrolase family XACM_3404 PF02645 Uncharacterised protein, DegV family COG1307 XACM_3405 PF01327 Polypeptide deformylase XACM_3406 PF03960 ArsC family XACM_3409 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XACM_3410 PF01270 Glycosyl hydrolases family 8 XACM_3411 PF03170 Bacterial cellulose synthase subunit XACM_3412 PF07238 PilZ domain XACM_3412 PF03552 Cellulose synthase XACM_3412 PF00535 Glycosyl transferase family 2 XACM_3414 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XACM_3414 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XACM_3421 PF07715 TonB-dependent Receptor Plug Domain XACM_3421 PF00593 TonB dependent receptor XACM_3423 PF00392 Bacterial regulatory proteins, gntR family XACM_3423 PF07702 UTRA domain XACM_3425 PF03958 Bacterial type II/III secretion system short domain XACM_3425 PF00263 Bacterial type II and III secretion system protein XACM_3427 PF10741 Type II secretion system (T2SS), protein M subtype b XACM_3428 PF05137 Fimbrial assembly protein (PilN) XACM_3429 PF03934 Type II secretion system (T2SS), protein K XACM_3431 PF07963 Prokaryotic N-terminal methylation motif XACM_3432 PF12019 Type II transport protein GspH XACM_3433 PF08334 Type II secretion system (T2SS), protein G XACM_3434 PF00482 Type II secretion system (T2SS), protein F XACM_3435 PF00437 Type II/IV secretion system protein XACM_3435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XACM_3437 PF04151 Bacterial pre-peptidase C-terminal domain XACM_3437 PF00082 Subtilase family XACM_3438 PF03895 YadA-like membrane anchor domain XACM_3438 PF05658 Head domain of trimeric autotransporter adhesin XACM_3438 PF05662 Coiled stalk of trimeric autotransporter adhesin XACM_3438 PF13018 Extended Signal Peptide of Type V secretion system XACM_3439 PF00082 Subtilase family XACM_3439 PF04151 Bacterial pre-peptidase C-terminal domain XACM_3440 PF05658 Head domain of trimeric autotransporter adhesin XACM_3440 PF05662 Coiled stalk of trimeric autotransporter adhesin XACM_3440 PF03895 YadA-like membrane anchor domain XACM_3440 PF13018 Extended Signal Peptide of Type V secretion system XACM_3441 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XACM_3441 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XACM_3441 PF02769 AIR synthase related protein, C-terminal domain XACM_3442 PF13098 Thioredoxin-like domain XACM_3442 PF10411 Disulfide bond isomerase protein N-terminus XACM_3444 PF02899 Phage integrase, N-terminal SAM-like domain XACM_3444 PF00589 Phage integrase family XACM_3448 PF03739 Lipopolysaccharide export system permease LptF/LptG XACM_3450 PF02789 Cytosol aminopeptidase family, N-terminal domain XACM_3450 PF00883 Cytosol aminopeptidase family, catalytic domain XACM_3453 PF10458 Valyl tRNA synthetase tRNA binding arm XACM_3453 PF00133 tRNA synthetases class I (I, L, M and V) XACM_3453 PF08264 Anticodon-binding domain of tRNA XACM_3454 PF00593 TonB dependent receptor XACM_3454 PF07715 TonB-dependent Receptor Plug Domain XACM_3455 PF01464 Transglycosylase SLT domain XACM_3455 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XACM_3460 PF01066 CDP-alcohol phosphatidyltransferase XACM_3462 PF03129 Anticodon binding domain XACM_3462 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XACM_3462 PF04073 Aminoacyl-tRNA editing domain XACM_3463 PF00816 H-NS histone family XACM_3465 PF02405 Permease MlaE XACM_3466 PF00005 ABC transporter XACM_3467 PF03886 ABC-type transport auxiliary lipoprotein component XACM_3467 PF02470 MlaD protein XACM_3471 PF14307 Glycosyltransferase WbsX XACM_3471 PF05045 Rhamnan synthesis protein F XACM_3472 PF01144 Coenzyme A transferase XACM_3473 PF01144 Coenzyme A transferase XACM_3474 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XACM_3474 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XACM_3474 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XACM_3474 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XACM_3475 PF00483 Nucleotidyl transferase XACM_3475 PF01050 Mannose-6-phosphate isomerase XACM_3476 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XACM_3476 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XACM_3476 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XACM_3477 PF04321 RmlD substrate binding domain XACM_3478 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XACM_3479 PF00483 Nucleotidyl transferase XACM_3480 PF16363 GDP-mannose 4,6 dehydratase XACM_3481 PF01012 Electron transfer flavoprotein domain XACM_3482 PF01012 Electron transfer flavoprotein domain XACM_3482 PF00766 Electron transfer flavoprotein FAD-binding domain XACM_3484 PF01040 UbiA prenyltransferase family XACM_3485 PF04030 D-arabinono-1,4-lactone oxidase XACM_3485 PF01565 FAD binding domain XACM_3486 PF00106 short chain dehydrogenase XACM_3487 PF01370 NAD dependent epimerase/dehydratase family XACM_3491 PF01370 NAD dependent epimerase/dehydratase family XACM_3492 PF16363 GDP-mannose 4,6 dehydratase XACM_3496 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XACM_3499 PF00005 ABC transporter XACM_3500 PF01061 ABC-2 type transporter XACM_3502 PF01053 Cys/Met metabolism PLP-dependent enzyme XACM_3503 PF00291 Pyridoxal-phosphate dependent enzyme XACM_3503 PF00571 CBS domain XACM_3507 PF00437 Type II/IV secretion system protein XACM_3508 PF02798 Glutathione S-transferase, N-terminal domain XACM_3508 PF14497 Glutathione S-transferase, C-terminal domain XACM_3510 PF00270 DEAD/DEAH box helicase XACM_3510 PF00271 Helicase conserved C-terminal domain XACM_3511 PF01242 6-pyruvoyl tetrahydropterin synthase XACM_3514 PF13185 GAF domain XACM_3516 PF13419 Haloacid dehalogenase-like hydrolase XACM_3517 PF00817 impB/mucB/samB family XACM_3517 PF11799 impB/mucB/samB family C-terminal domain XACM_3518 PF07977 FabA-like domain XACM_3519 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_3519 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_3521 PF01432 Peptidase family M3 XACM_3524 PF00394 Multicopper oxidase XACM_3524 PF07732 Multicopper oxidase XACM_3524 PF07731 Multicopper oxidase XACM_3525 PF05275 Copper resistance protein B precursor (CopB) XACM_3526 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XACM_3531 PF01380 SIS domain XACM_3532 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_3533 PF00005 ABC transporter XACM_3534 PF12704 MacB-like periplasmic core domain XACM_3534 PF02687 FtsX-like permease family XACM_3535 PF00005 ABC transporter XACM_3535 PF02687 FtsX-like permease family XACM_3535 PF12704 MacB-like periplasmic core domain XACM_3537 PF00158 Sigma-54 interaction domain XACM_3537 PF00072 Response regulator receiver domain XACM_3537 PF02954 Bacterial regulatory protein, Fis family XACM_3539 PF14602 Hexapeptide repeat of succinyl-transferase XACM_3539 PF12804 MobA-like NTP transferase domain XACM_3539 PF00132 Bacterial transferase hexapeptide (six repeats) XACM_3541 PF01817 Chorismate mutase type II XACM_3542 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XACM_3542 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XACM_3543 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XACM_3543 PF02874 ATP synthase alpha/beta family, beta-barrel domain XACM_3544 PF00231 ATP synthase XACM_3545 PF00306 ATP synthase alpha/beta chain, C terminal domain XACM_3545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XACM_3545 PF02874 ATP synthase alpha/beta family, beta-barrel domain XACM_3546 PF00213 ATP synthase delta (OSCP) subunit XACM_3547 PF00430 ATP synthase B/B' CF(0) XACM_3548 PF00137 ATP synthase subunit C XACM_3549 PF00119 ATP synthase A chain XACM_3554 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_3554 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XACM_3556 PF02817 e3 binding domain XACM_3556 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XACM_3556 PF00364 Biotin-requiring enzyme XACM_3564 PF03180 NLPA lipoprotein XACM_3565 PF00528 Binding-protein-dependent transport system inner membrane component XACM_3566 PF00005 ABC transporter XACM_3566 PF09383 NIL domain XACM_3567 PF00892 EamA-like transporter family XACM_3568 PF04461 Protein of unknown function (DUF520) XACM_3570 PF00512 His Kinase A (phospho-acceptor) domain XACM_3570 PF00072 Response regulator receiver domain XACM_3570 PF00989 PAS fold XACM_3570 PF01627 Hpt domain XACM_3570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3570 PF18415 Histidine kinase receptor ArcB trans-membrane domain XACM_3574 PF13419 Haloacid dehalogenase-like hydrolase XACM_3575 PF01479 S4 domain XACM_3575 PF00849 RNA pseudouridylate synthase XACM_3576 PF05175 Methyltransferase small domain XACM_3576 PF08468 Methyltransferase small domain N-terminal XACM_3579 PF07995 Glucose / Sorbosone dehydrogenase XACM_3581 PF00512 His Kinase A (phospho-acceptor) domain XACM_3581 PF00989 PAS fold XACM_3581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3585 PF00842 Alanine racemase, C-terminal domain XACM_3585 PF01168 Alanine racemase, N-terminal domain XACM_3586 PF01266 FAD dependent oxidoreductase XACM_3587 PF01037 Lrp/AsnC ligand binding domain XACM_3589 PF01641 SelR domain XACM_3591 PF01618 MotA/TolQ/ExbB proton channel family XACM_3592 PF13677 Membrane MotB of proton-channel complex MotA/MotB XACM_3592 PF00691 OmpA family XACM_3597 PF01061 ABC-2 type transporter XACM_3598 PF00005 ABC transporter XACM_3599 PF00999 Sodium/hydrogen exchanger family XACM_3600 PF02469 Fasciclin domain XACM_3601 PF03167 Uracil DNA glycosylase superfamily XACM_3603 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XACM_3604 PF03466 LysR substrate binding domain XACM_3604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3605 PF03358 NADPH-dependent FMN reductase XACM_3606 PF00248 Aldo/keto reductase family XACM_3609 PF01431 Peptidase family M13 XACM_3609 PF05649 Peptidase family M13 XACM_3612 PF13520 Amino acid permease XACM_3614 PF04397 LytTr DNA-binding domain XACM_3614 PF00072 Response regulator receiver domain XACM_3615 PF06580 Histidine kinase XACM_3615 PF02743 Cache domain XACM_3615 PF00672 HAMP domain XACM_3615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3618 PF05974 Domain of unknown function (DUF892) XACM_3619 PF05067 Manganese containing catalase XACM_3622 PF01339 CheB methylesterase XACM_3622 PF08448 PAS fold XACM_3622 PF01739 CheR methyltransferase, SAM binding domain XACM_3622 PF03705 CheR methyltransferase, all-alpha domain XACM_3625 PF00072 Response regulator receiver domain XACM_3625 PF02954 Bacterial regulatory protein, Fis family XACM_3625 PF00158 Sigma-54 interaction domain XACM_3627 PF01654 Cytochrome bd terminal oxidase subunit I XACM_3628 PF02322 Cytochrome bd terminal oxidase subunit II XACM_3632 PF16363 GDP-mannose 4,6 dehydratase XACM_3634 PF03275 UDP-galactopyranose mutase XACM_3636 PF00005 ABC transporter XACM_3636 PF00664 ABC transporter transmembrane region XACM_3639 PF08240 Alcohol dehydrogenase GroES-like domain XACM_3639 PF13823 Alcohol dehydrogenase GroES-associated XACM_3639 PF00107 Zinc-binding dehydrogenase XACM_3648 PF07715 TonB-dependent Receptor Plug Domain XACM_3648 PF00593 TonB dependent receptor XACM_3651 PF00005 ABC transporter XACM_3653 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3653 PF03466 LysR substrate binding domain XACM_3654 PF01042 Endoribonuclease L-PSP XACM_3657 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3657 PF03466 LysR substrate binding domain XACM_3658 PF02525 Flavodoxin-like fold XACM_3664 PF00916 Sulfate permease family XACM_3664 PF01740 STAS domain XACM_3665 PF00654 Voltage gated chloride channel XACM_3667 PF00557 Metallopeptidase family M24 XACM_3669 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3669 PF03466 LysR substrate binding domain XACM_3672 PF01494 FAD binding domain XACM_3673 PF13683 Integrase core domain XACM_3673 PF13276 HTH-like domain XACM_3674 PF01527 Transposase XACM_3688 PF04545 Sigma-70, region 4 XACM_3688 PF04539 Sigma-70 region 3 XACM_3688 PF04542 Sigma-70 region 2 XACM_3688 PF00140 Sigma-70 factor, region 1.2 XACM_3688 PF03979 Sigma-70 factor, region 1.1 XACM_3688 PF04546 Sigma-70, non-essential region XACM_3689 PF03279 Bacterial lipid A biosynthesis acyltransferase XACM_3690 PF02580 D-Tyr-tRNA(Tyr) deacylase XACM_3692 PF00925 GTP cyclohydrolase II XACM_3696 PF00535 Glycosyl transferase family 2 XACM_3699 PF01029 NusB family XACM_3699 PF01189 16S rRNA methyltransferase RsmB/F XACM_3700 PF00551 Formyl transferase XACM_3700 PF02911 Formyl transferase, C-terminal domain XACM_3701 PF01327 Polypeptide deformylase XACM_3702 PF01476 LysM domain XACM_3703 PF02481 DNA recombination-mediator protein A XACM_3703 PF17782 DprA winged helix domain XACM_3704 PF04361 Protein of unknown function (DUF494) XACM_3705 PF07963 Prokaryotic N-terminal methylation motif XACM_3705 PF00114 Pilin (bacterial filament) XACM_3707 PF01751 Toprim domain XACM_3707 PF13368 Topoisomerase C-terminal repeat XACM_3707 PF01131 DNA topoisomerase XACM_3708 PF01300 Telomere recombination XACM_3713 PF01343 Peptidase family S49 XACM_3714 PF01554 MatE XACM_3719 PF00270 DEAD/DEAH box helicase XACM_3719 PF00271 Helicase conserved C-terminal domain XACM_3719 PF17764 3′ DNA-binding domain (3′BD) XACM_3719 PF18074 Primosomal protein N C-terminal domain XACM_3719 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XACM_3720 PF00043 Glutathione S-transferase, C-terminal domain XACM_3720 PF13417 Glutathione S-transferase, N-terminal domain XACM_3723 PF07992 Pyridine nucleotide-disulphide oxidoreductase XACM_3724 PF03458 UPF0126 domain XACM_3725 PF04542 Sigma-70 region 2 XACM_3725 PF04545 Sigma-70, region 4 XACM_3726 PF03167 Uracil DNA glycosylase superfamily XACM_3727 PF00072 Response regulator receiver domain XACM_3728 PF18075 FtsX extracellular domain XACM_3729 PF00005 ABC transporter XACM_3730 PF00270 DEAD/DEAH box helicase XACM_3730 PF00271 Helicase conserved C-terminal domain XACM_3730 PF12300 ATP-dependent RNA helicase RhlB XACM_3731 PF00085 Thioredoxin XACM_3732 PF07498 Rho termination factor, N-terminal domain XACM_3732 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XACM_3732 PF07497 Rho termination factor, RNA-binding domain XACM_3734 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XACM_3735 PF03466 LysR substrate binding domain XACM_3735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3737 PF03971 Monomeric isocitrate dehydrogenase XACM_3739 PF04972 BON domain XACM_3739 PF01476 LysM domain XACM_3740 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XACM_3740 PF14489 QueF-like protein XACM_3741 PF01546 Peptidase family M20/M25/M40 XACM_3741 PF07687 Peptidase dimerisation domain XACM_3742 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_3743 PF00873 AcrB/AcrD/AcrF family XACM_3744 PF00873 AcrB/AcrD/AcrF family XACM_3745 PF07063 Domain of unknown function (DUF1338) XACM_3753 PF01427 D-ala-D-ala dipeptidase XACM_3754 PF01510 N-acetylmuramoyl-L-alanine amidase XACM_3756 PF13378 Enolase C-terminal domain-like XACM_3756 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XACM_3758 PF13520 Amino acid permease XACM_3761 PF05360 yiaA/B two helix domain XACM_3762 PF07995 Glucose / Sorbosone dehydrogenase XACM_3763 PF01915 Glycosyl hydrolase family 3 C-terminal domain XACM_3763 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_3763 PF14310 Fibronectin type III-like domain XACM_3764 PF02152 Dihydroneopterin aldolase XACM_3765 PF00814 Glycoprotease family XACM_3766 PF01165 Ribosomal protein S21 XACM_3767 PF09424 Yqey-like protein XACM_3769 PF03631 Virulence factor BrkB XACM_3770 PF10410 DnaB-helicase binding domain of primase XACM_3770 PF01807 CHC2 zinc finger XACM_3770 PF08278 DNA primase DnaG DnaB-binding XACM_3770 PF08275 DNA primase catalytic core, N-terminal domain XACM_3771 PF13593 SBF-like CPA transporter family (DUF4137) XACM_3773 PF01040 UbiA prenyltransferase family XACM_3778 PF00510 Cytochrome c oxidase subunit III XACM_3779 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XACM_3781 PF00115 Cytochrome C and Quinol oxidase polypeptide I XACM_3782 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XACM_3782 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XACM_3784 PF01619 Proline dehydrogenase XACM_3784 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XACM_3784 PF00171 Aldehyde dehydrogenase family XACM_3784 PF14850 DNA-binding domain of Proline dehydrogenase XACM_3791 PF00579 tRNA synthetases class I (W and Y) XACM_3792 PF04225 Opacity-associated protein A LysM-like domain XACM_3792 PF01551 Peptidase family M23 XACM_3793 PF03702 Anhydro-N-acetylmuramic acid kinase XACM_3795 PF07690 Major Facilitator Superfamily XACM_3796 PF03372 Endonuclease/Exonuclease/phosphatase family XACM_3797 PF00156 Phosphoribosyl transferase domain XACM_3799 PF13614 AAA domain XACM_3800 PF02195 ParB-like nuclease domain XACM_3800 PF17762 HTH domain found in ParB protein XACM_3802 PF01370 NAD dependent epimerase/dehydratase family XACM_3803 PF00535 Glycosyl transferase family 2 XACM_3806 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XACM_3806 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XACM_3806 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XACM_3806 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XACM_3807 PF00692 dUTPase XACM_3808 PF02441 Flavoprotein XACM_3808 PF04127 DNA / pantothenate metabolism flavoprotein XACM_3809 PF04002 RadC-like JAB domain XACM_3810 PF03485 Arginyl tRNA synthetase N terminal domain XACM_3810 PF05746 DALR anticodon binding domain XACM_3810 PF00750 tRNA synthetases class I (R) XACM_3813 PF00106 short chain dehydrogenase XACM_3814 PF01757 Acyltransferase family XACM_3815 PF03033 Glycosyltransferase family 28 N-terminal domain XACM_3816 PF00550 Phosphopantetheine attachment site XACM_3816 PF00668 Condensation domain XACM_3816 PF13193 AMP-binding enzyme C-terminal domain XACM_3816 PF00501 AMP-binding enzyme XACM_3816 PF00975 Thioesterase domain XACM_3817 PF17944 Arginine decarboxylase C-terminal helical extension XACM_3817 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XACM_3817 PF17810 Arginine decarboxylase helical bundle domain XACM_3818 PF17284 Spermidine synthase tetramerisation domain XACM_3822 PF07555 beta-N-acetylglucosaminidase XACM_3822 PF02838 Glycosyl hydrolase family 20, domain 2 XACM_3822 PF00041 Fibronectin type III domain XACM_3822 PF00754 F5/8 type C domain XACM_3822 PF00963 Cohesin domain XACM_3823 PF00543 Nitrogen regulatory protein P-II XACM_3824 PF04380 Membrane fusogenic activity XACM_3825 PF13335 Magnesium chelatase, subunit ChlI C-terminal XACM_3825 PF01078 Magnesium chelatase, subunit ChlI XACM_3828 PF00563 EAL domain XACM_3828 PF12792 CSS motif domain associated with EAL XACM_3829 PF00487 Fatty acid desaturase XACM_3830 PF00175 Oxidoreductase NAD-binding domain XACM_3830 PF00111 2Fe-2S iron-sulfur cluster binding domain XACM_3830 PF00970 Oxidoreductase FAD-binding domain XACM_3831 PF00440 Bacterial regulatory proteins, tetR family XACM_3836 PF01139 tRNA-splicing ligase RtcB XACM_3844 PF08338 Domain of unknown function (DUF1731) XACM_3844 PF01370 NAD dependent epimerase/dehydratase family XACM_3845 PF00486 Transcriptional regulatory protein, C terminal XACM_3845 PF00072 Response regulator receiver domain XACM_3846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3846 PF08521 Two-component sensor kinase N-terminal XACM_3846 PF00512 His Kinase A (phospho-acceptor) domain XACM_3850 PF00595 PDZ domain XACM_3854 PF01594 AI-2E family transporter XACM_3855 PF13419 Haloacid dehalogenase-like hydrolase XACM_3856 PF02789 Cytosol aminopeptidase family, N-terminal domain XACM_3856 PF00883 Cytosol aminopeptidase family, catalytic domain XACM_3858 PF04542 Sigma-70 region 2 XACM_3858 PF08281 Sigma-70, region 4 XACM_3859 PF00199 Catalase XACM_3862 PF00072 Response regulator receiver domain XACM_3862 PF00196 Bacterial regulatory proteins, luxR family XACM_3863 PF07730 Histidine kinase XACM_3864 PF13533 Biotin-lipoyl like XACM_3865 PF00005 ABC transporter XACM_3869 PF00892 EamA-like transporter family XACM_3870 PF00892 EamA-like transporter family XACM_3873 PF00753 Metallo-beta-lactamase superfamily XACM_3874 PF00579 tRNA synthetases class I (W and Y) XACM_3875 PF05532 CsbD-like XACM_3878 PF00491 Arginase family XACM_3883 PF02223 Thymidylate kinase XACM_3886 PF03309 Type III pantothenate kinase XACM_3887 PF03099 Biotin/lipoate A/B protein ligase family XACM_3887 PF02237 Biotin protein ligase C terminal domain XACM_3887 PF08279 HTH domain XACM_3889 PF06167 Glucose-regulated metallo-peptidase M90 XACM_3892 PF00672 HAMP domain XACM_3892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_3892 PF00512 His Kinase A (phospho-acceptor) domain XACM_3893 PF00072 Response regulator receiver domain XACM_3893 PF00486 Transcriptional regulatory protein, C terminal XACM_3895 PF01207 Dihydrouridine synthase (Dus) XACM_3900 PF06628 Catalase-related immune-responsive XACM_3900 PF00199 Catalase XACM_3901 PF13307 Helicase C-terminal domain XACM_3901 PF06733 DEAD_2 XACM_3904 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XACM_3904 PF08501 Shikimate dehydrogenase substrate binding domain XACM_3904 PF01488 Shikimate / quinate 5-dehydrogenase XACM_3906 PF00667 FAD binding domain XACM_3906 PF00258 Flavodoxin XACM_3906 PF00175 Oxidoreductase NAD-binding domain XACM_3908 PF00490 Delta-aminolevulinic acid dehydratase XACM_3913 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XACM_3913 PF00326 Prolyl oligopeptidase family XACM_3914 PF02798 Glutathione S-transferase, N-terminal domain XACM_3914 PF00043 Glutathione S-transferase, C-terminal domain XACM_3918 PF04820 Tryptophan halogenase XACM_3921 PF00005 ABC transporter XACM_3923 PF01381 Helix-turn-helix XACM_3925 PF01229 Glycosyl hydrolases family 39 XACM_3926 PF02583 Metal-sensitive transcriptional repressor XACM_3927 PF01545 Cation efflux family XACM_3928 PF00175 Oxidoreductase NAD-binding domain XACM_3928 PF01383 CpcD/allophycocyanin linker domain XACM_3929 PF00005 ABC transporter XACM_3930 PF01061 ABC-2 type transporter XACM_3931 PF08546 Ketopantoate reductase PanE/ApbA C terminal XACM_3931 PF02558 Ketopantoate reductase PanE/ApbA XACM_3937 PF00268 Ribonucleotide reductase, small chain XACM_3938 PF02867 Ribonucleotide reductase, barrel domain XACM_3938 PF00317 Ribonucleotide reductase, all-alpha domain XACM_3938 PF03477 ATP cone domain XACM_3940 PF13607 Succinyl-CoA ligase like flavodoxin domain XACM_3940 PF00583 Acetyltransferase (GNAT) family XACM_3940 PF13380 CoA binding domain XACM_3943 PF00571 CBS domain XACM_3943 PF01769 Divalent cation transporter XACM_3943 PF03448 MgtE intracellular N domain XACM_3945 PF00194 Eukaryotic-type carbonic anhydrase XACM_3946 PF00999 Sodium/hydrogen exchanger family XACM_3946 PF02254 TrkA-N domain XACM_3950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XACM_3950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XACM_3951 PF00723 Glycosyl hydrolases family 15 XACM_3953 PF05166 YcgL domain XACM_3954 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_3954 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_3956 PF00535 Glycosyl transferase family 2 XACM_3966 PF07977 FabA-like domain XACM_3967 PF01553 Acyltransferase XACM_3969 PF00550 Phosphopantetheine attachment site XACM_3970 PF04820 Tryptophan halogenase XACM_3976 PF01218 Coproporphyrinogen III oxidase XACM_3977 PF01612 3'-5' exonuclease XACM_3977 PF01367 5'-3' exonuclease, C-terminal SAM fold XACM_3977 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XACM_3977 PF00476 DNA polymerase family A XACM_3989 PF00248 Aldo/keto reductase family XACM_3990 PF03466 LysR substrate binding domain XACM_3990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_3993 PF16671 Actin cross-linking domain XACM_3993 PF04717 Type VI secretion system, phage-baseplate injector XACM_3996 PF03793 PASTA domain XACM_3996 PF00069 Protein kinase domain XACM_3998 PF08281 Sigma-70, region 4 XACM_3998 PF04542 Sigma-70 region 2 XACM_4001 PF00328 Histidine phosphatase superfamily (branch 2) XACM_4008 PF10431 C-terminal, D2-small domain, of ClpB protein XACM_4008 PF00004 ATPase family associated with various cellular activities (AAA) XACM_4008 PF07724 AAA domain (Cdc48 subfamily) XACM_4008 PF17871 AAA lid domain XACM_4013 PF05638 Type VI secretion system effector, Hcp XACM_4018 PF12464 Maltose acetyltransferase XACM_4018 PF14602 Hexapeptide repeat of succinyl-transferase XACM_4020 PF13361 UvrD-like helicase C-terminal domain XACM_4020 PF00580 UvrD/REP helicase N-terminal domain XACM_4023 PF13396 Phospholipase_D-nuclease N-terminal XACM_4023 PF13091 PLD-like domain XACM_4024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_4024 PF03466 LysR substrate binding domain XACM_4025 PF03737 Aldolase/RraA XACM_4026 PF04303 PrpF protein XACM_4027 PF04909 Amidohydrolase XACM_4028 PF00471 Ribosomal protein L33 XACM_4029 PF00830 Ribosomal L28 family XACM_4031 PF00873 AcrB/AcrD/AcrF family XACM_4033 PF13533 Biotin-lipoyl like XACM_4038 PF02527 rRNA small subunit methyltransferase G XACM_4039 PF09423 PhoD-like phosphatase XACM_4039 PF16655 PhoD-like phosphatase, N-terminal domain XACM_4040 PF09423 PhoD-like phosphatase XACM_4040 PF16655 PhoD-like phosphatase, N-terminal domain XACM_4041 PF01648 4'-phosphopantetheinyl transferase superfamily XACM_4042 PF04226 Transglycosylase associated protein XACM_4044 PF03372 Endonuclease/Exonuclease/phosphatase family XACM_4046 PF00474 Sodium:solute symporter family XACM_4047 PF04341 Protein of unknown function, DUF485 XACM_4049 PF00501 AMP-binding enzyme XACM_4049 PF13193 AMP-binding enzyme C-terminal domain XACM_4049 PF16177 Acetyl-coenzyme A synthetase N-terminus XACM_4050 PF00196 Bacterial regulatory proteins, luxR family XACM_4050 PF00072 Response regulator receiver domain XACM_4054 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XACM_4054 PF04616 Glycosyl hydrolases family 43 XACM_4055 PF00248 Aldo/keto reductase family XACM_4058 PF01557 Fumarylacetoacetate (FAA) hydrolase family XACM_4060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XACM_4060 PF13378 Enolase C-terminal domain-like XACM_4061 PF05336 L-rhamnose mutarotase XACM_4062 PF07690 Major Facilitator Superfamily XACM_4063 PF01614 Bacterial transcriptional regulator XACM_4063 PF09339 IclR helix-turn-helix domain XACM_4064 PF02659 Putative manganese efflux pump XACM_4065 PF00512 His Kinase A (phospho-acceptor) domain XACM_4065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_4068 PF06165 Glycosyltransferase family 36 XACM_4068 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XACM_4071 PF01011 PQQ enzyme repeat XACM_4071 PF13360 PQQ-like domain XACM_4071 PF13570 PQQ-like domain XACM_4075 PF04357 TamB, inner membrane protein subunit of TAM complex XACM_4076 PF01103 Surface antigen XACM_4076 PF17243 POTRA domain TamA domain 1 XACM_4077 PF07715 TonB-dependent Receptor Plug Domain XACM_4077 PF00593 TonB dependent receptor XACM_4078 PF01527 Transposase XACM_4079 PF13276 HTH-like domain XACM_4079 PF13683 Integrase core domain XACM_4081 PF13181 Tetratricopeptide repeat XACM_4082 PF02092 Glycyl-tRNA synthetase beta subunit XACM_4082 PF05746 DALR anticodon binding domain XACM_4083 PF02091 Glycyl-tRNA synthetase alpha subunit XACM_4084 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XACM_4084 PF00437 Type II/IV secretion system protein XACM_4087 PF00958 GMP synthase C terminal domain XACM_4087 PF00117 Glutamine amidotransferase class-I XACM_4089 PF00902 Sec-independent protein translocase protein (TatC) XACM_4090 PF02416 mttA/Hcf106 family XACM_4091 PF02416 mttA/Hcf106 family XACM_4093 PF00762 Ferrochelatase XACM_4094 PF12697 Alpha/beta hydrolase family XACM_4097 PF04381 Putative exonuclease, RdgC XACM_4098 PF01171 PP-loop family XACM_4100 PF00356 Bacterial regulatory proteins, lacI family XACM_4101 PF07488 Glycosyl hydrolase family 67 middle domain XACM_4101 PF07477 Glycosyl hydrolase family 67 C-terminus XACM_4101 PF03648 Glycosyl hydrolase family 67 N-terminus XACM_4103 PF13378 Enolase C-terminal domain-like XACM_4103 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XACM_4104 PF04616 Glycosyl hydrolases family 43 XACM_4104 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XACM_4105 PF14310 Fibronectin type III-like domain XACM_4105 PF01915 Glycosyl hydrolase family 3 C-terminal domain XACM_4105 PF07691 PA14 domain XACM_4105 PF00933 Glycosyl hydrolase family 3 N terminal domain XACM_4106 PF01232 Mannitol dehydrogenase Rossmann domain XACM_4106 PF08125 Mannitol dehydrogenase C-terminal domain XACM_4113 PF00171 Aldehyde dehydrogenase family XACM_4116 PF00202 Aminotransferase class-III XACM_4118 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XACM_4118 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XACM_4121 PF08450 SMP-30/Gluconolactonase/LRE-like region XACM_4122 PF00331 Glycosyl hydrolase family 10 XACM_4123 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XACM_4123 PF16355 Domain of unknown function (DUF4982) XACM_4123 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XACM_4123 PF00703 Glycosyl hydrolases family 2 XACM_4123 PF02837 Glycosyl hydrolases family 2, sugar binding domain XACM_4124 PF02614 Glucuronate isomerase XACM_4125 PF00553 Cellulose binding domain XACM_4125 PF03422 Carbohydrate binding module (family 6) XACM_4125 PF00331 Glycosyl hydrolase family 10 XACM_4127 PF03422 Carbohydrate binding module (family 6) XACM_4127 PF00553 Cellulose binding domain XACM_4127 PF00331 Glycosyl hydrolase family 10 XACM_4131 PF04616 Glycosyl hydrolases family 43 XACM_4134 PF01527 Transposase XACM_4135 PF13276 HTH-like domain XACM_4135 PF13683 Integrase core domain XACM_4140 PF08659 KR domain XACM_4140 PF00109 Beta-ketoacyl synthase, N-terminal domain XACM_4140 PF16197 Ketoacyl-synthetase C-terminal extension XACM_4140 PF00550 Phosphopantetheine attachment site XACM_4140 PF00698 Acyl transferase domain XACM_4140 PF08240 Alcohol dehydrogenase GroES-like domain XACM_4140 PF02801 Beta-ketoacyl synthase, C-terminal domain XACM_4140 PF00107 Zinc-binding dehydrogenase XACM_4140 PF14765 Polyketide synthase dehydratase XACM_4141 PF01553 Acyltransferase XACM_4143 PF00356 Bacterial regulatory proteins, lacI family XACM_4146 PF04820 Tryptophan halogenase XACM_4147 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XACM_4148 PF04337 Protein of unknown function, DUF480 XACM_4149 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XACM_4152 PF00580 UvrD/REP helicase N-terminal domain XACM_4152 PF13361 UvrD-like helicase C-terminal domain XACM_4153 PF00265 Thymidine kinase XACM_4154 PF00360 Phytochrome region XACM_4154 PF08446 PAS fold XACM_4154 PF00512 His Kinase A (phospho-acceptor) domain XACM_4154 PF01590 GAF domain XACM_4154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XACM_4155 PF04349 Periplasmic glucan biosynthesis protein, MdoG XACM_4157 PF06827 Zinc finger found in FPG and IleRS XACM_4157 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XACM_4157 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XACM_4164 PF03594 Benzoate membrane transport protein XACM_4165 PF00360 Phytochrome region XACM_4165 PF13426 PAS domain XACM_4165 PF08446 PAS fold XACM_4165 PF01590 GAF domain XACM_4166 PF01126 Heme oxygenase XACM_4167 PF07690 Major Facilitator Superfamily XACM_4168 PF01263 Aldose 1-epimerase XACM_4170 PF02810 SEC-C motif XACM_4171 PF01925 Sulfite exporter TauE/SafE XACM_4175 PF01227 GTP cyclohydrolase I XACM_4177 PF07869 Protein of unknown function (DUF1656) XACM_4178 PF00529 HlyD membrane-fusion protein of T1SS XACM_4178 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XACM_4180 PF04632 Fusaric acid resistance protein family XACM_4181 PF00083 Sugar (and other) transporter XACM_4183 PF03466 LysR substrate binding domain XACM_4183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_4184 PF00106 short chain dehydrogenase XACM_4185 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family XACM_4186 PF13396 Phospholipase_D-nuclease N-terminal XACM_4186 PF13091 PLD-like domain XACM_4194 PF13276 HTH-like domain XACM_4194 PF13683 Integrase core domain XACM_4195 PF01527 Transposase XACM_4200 PF00849 RNA pseudouridylate synthase XACM_4209 PF00440 Bacterial regulatory proteins, tetR family XACM_4216 PF01381 Helix-turn-helix XACM_4218 PF13538 UvrD-like helicase C-terminal domain XACM_4219 PF12705 PD-(D/E)XK nuclease superfamily XACM_4219 PF13361 UvrD-like helicase C-terminal domain XACM_4219 PF00580 UvrD/REP helicase N-terminal domain XACM_4220 PF17946 RecC C-terminal domain XACM_4227 PF00005 ABC transporter XACM_4228 PF02405 Permease MlaE XACM_4229 PF02470 MlaD protein XACM_4230 PF05494 MlaC protein XACM_4232 PF04333 MlaA lipoprotein XACM_4234 PF00255 Glutathione peroxidase XACM_4236 PF02646 RmuC family XACM_4237 PF08240 Alcohol dehydrogenase GroES-like domain XACM_4237 PF00107 Zinc-binding dehydrogenase XACM_4238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XACM_4238 PF03466 LysR substrate binding domain XACM_4242 PF13520 Amino acid permease XACM_4243 PF17678 Glycosyl hydrolase family 92 N-terminal domain XACM_4243 PF07971 Glycosyl hydrolase family 92 XACM_4244 PF07715 TonB-dependent Receptor Plug Domain XACM_4244 PF00593 TonB dependent receptor XACM_4245 PF10947 Protein of unknown function (DUF2628) XACM_4246 PF00990 Diguanylate cyclase, GGDEF domain XACM_4247 PF05651 Putative sugar diacid recognition XACM_4247 PF13556 PucR C-terminal helix-turn-helix domain XACM_4247 PF17853 GGDEF-like domain XACM_4248 PF02595 Glycerate kinase family XACM_4249 PF07690 Major Facilitator Superfamily XACM_4252 PF10672 S-adenosylmethionine-dependent methyltransferase XACM_4252 PF17785 PUA-like domain XACM_4253 PF03741 Integral membrane protein TerC family XACM_4254 PF01694 Rhomboid family XACM_4255 PF03009 Glycerophosphoryl diester phosphodiesterase family XACM_4257 PF01569 PAP2 superfamily XACM_4258 PF01926 50S ribosome-binding GTPase XACM_4258 PF10396 GTP-binding protein TrmE N-terminus XACM_4258 PF12631 MnmE helical domain XACM_4260 PF02096 60Kd inner membrane protein XACM_4260 PF14849 YidC periplasmic domain XACM_4261 PF00825 Ribonuclease P XACM_4262 PF00468 Ribosomal protein L34