locus-tag class description AEA00_00010 PF11638 DnaA N-terminal domain AEA00_00010 PF08299 Bacterial dnaA protein helix-turn-helix AEA00_00010 PF00308 Bacterial dnaA protein AEA00_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain AEA00_00015 PF02767 DNA polymerase III beta subunit, central domain AEA00_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain AEA00_00020 PF02463 RecF/RecN/SMC N terminal domain AEA00_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_00025 PF00204 DNA gyrase B AEA00_00025 PF00986 DNA gyrase B subunit, carboxyl terminus AEA00_00025 PF18053 DNA gyrase B subunit insert domain AEA00_00025 PF01751 Toprim domain AEA00_00035 PF01435 Peptidase family M48 AEA00_00045 PF03544 Gram-negative bacterial TonB protein C-terminal AEA00_00050 PF01618 MotA/TolQ/ExbB proton channel family AEA00_00055 PF02472 Biopolymer transport protein ExbD/TolR AEA00_00060 PF02472 Biopolymer transport protein ExbD/TolR AEA00_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AEA00_00075 PF13396 Phospholipase_D-nuclease N-terminal AEA00_00075 PF13091 PLD-like domain AEA00_00080 PF04055 Radical SAM superfamily AEA00_00095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AEA00_00110 PF01842 ACT domain AEA00_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEA00_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEA00_00115 PF13180 PDZ domain AEA00_00115 PF03572 Peptidase family S41 AEA00_00120 PF01551 Peptidase family M23 AEA00_00130 PF04389 Peptidase family M28 AEA00_00140 PF00150 Cellulase (glycosyl hydrolase family 5) AEA00_00145 PF00150 Cellulase (glycosyl hydrolase family 5) AEA00_00150 PF00150 Cellulase (glycosyl hydrolase family 5) AEA00_00155 PF00107 Zinc-binding dehydrogenase AEA00_00155 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_00165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AEA00_00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_00170 PF04898 Glutamate synthase central domain AEA00_00170 PF01645 Conserved region in glutamate synthase AEA00_00170 PF01493 GXGXG motif AEA00_00170 PF00310 Glutamine amidotransferases class-II AEA00_00185 PF00398 Ribosomal RNA adenine dimethylase AEA00_00195 PF05726 Pirin C-terminal cupin domain AEA00_00195 PF02678 Pirin AEA00_00200 PF02525 Flavodoxin-like fold AEA00_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_00205 PF03466 LysR substrate binding domain AEA00_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_00220 PF03466 LysR substrate binding domain AEA00_00275 PF00270 DEAD/DEAH box helicase AEA00_00275 PF09369 Domain of unknown function (DUF1998) AEA00_00275 PF00271 Helicase conserved C-terminal domain AEA00_00280 PF13784 Fic/DOC family N-terminal AEA00_00280 PF02661 Fic/DOC family AEA00_00285 PF03006 Haemolysin-III related AEA00_00305 PF02525 Flavodoxin-like fold AEA00_00315 PF01638 HxlR-like helix-turn-helix AEA00_00320 PF13614 AAA domain AEA00_00360 PF01872 RibD C-terminal domain AEA00_00365 PF05532 CsbD-like AEA00_00370 PF00072 Response regulator receiver domain AEA00_00370 PF00196 Bacterial regulatory proteins, luxR family AEA00_00400 PF01447 Thermolysin metallopeptidase, catalytic domain AEA00_00400 PF16485 Protealysin propeptide AEA00_00400 PF02868 Thermolysin metallopeptidase, alpha-helical domain AEA00_00410 PF13344 Haloacid dehalogenase-like hydrolase AEA00_00410 PF00293 NUDIX domain AEA00_00415 PF01594 AI-2E family transporter AEA00_00420 PF07859 alpha/beta hydrolase fold AEA00_00430 PF00085 Thioredoxin AEA00_00435 PF08946 Osmosensory transporter coiled coil AEA00_00435 PF00083 Sugar (and other) transporter AEA00_00475 PF07726 ATPase family associated with various cellular activities (AAA) AEA00_00475 PF17863 AAA lid domain AEA00_00505 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AEA00_00510 PF00155 Aminotransferase class I and II AEA00_00515 PF07715 TonB-dependent Receptor Plug Domain AEA00_00515 PF00593 TonB dependent receptor AEA00_00530 PF00171 Aldehyde dehydrogenase family AEA00_00545 PF02735 Ku70/Ku80 beta-barrel domain AEA00_00550 PF01068 ATP dependent DNA ligase domain AEA00_00550 PF04679 ATP dependent DNA ligase C terminal region AEA00_00550 PF13298 DNA polymerase Ligase (LigD) AEA00_00555 PF01070 FMN-dependent dehydrogenase AEA00_00560 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AEA00_00565 PF07730 Histidine kinase AEA00_00570 PF00196 Bacterial regulatory proteins, luxR family AEA00_00570 PF00072 Response regulator receiver domain AEA00_00595 PF00486 Transcriptional regulatory protein, C terminal AEA00_00595 PF18500 CadC C-terminal domain 1 AEA00_00600 PF12241 Trans-2-enoyl-CoA reductase catalytic region AEA00_00600 PF07055 Enoyl reductase FAD binding domain AEA00_00600 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AEA00_00615 PF00294 pfkB family carbohydrate kinase AEA00_00630 PF01095 Pectinesterase AEA00_00650 PF05598 Transposase domain (DUF772) AEA00_00655 PF11896 Domain of unknown function (DUF3416) AEA00_00655 PF00128 Alpha amylase, catalytic domain AEA00_00660 PF00128 Alpha amylase, catalytic domain AEA00_00660 PF16657 Maltogenic Amylase, C-terminal domain AEA00_00665 PF02806 Alpha amylase, C-terminal all-beta domain AEA00_00665 PF00128 Alpha amylase, catalytic domain AEA00_00665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AEA00_00700 PF00248 Aldo/keto reductase family AEA00_00705 PF13472 GDSL-like Lipase/Acylhydrolase family AEA00_00710 PF00135 Carboxylesterase family AEA00_00715 PF07859 alpha/beta hydrolase fold AEA00_00715 PF13472 GDSL-like Lipase/Acylhydrolase family AEA00_00725 PF03480 Bacterial extracellular solute-binding protein, family 7 AEA00_00735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AEA00_00740 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AEA00_00740 PF04616 Glycosyl hydrolases family 43 AEA00_00745 PF00356 Bacterial regulatory proteins, lacI family AEA00_00750 PF04962 KduI/IolB family AEA00_00765 PF00657 GDSL-like Lipase/Acylhydrolase AEA00_00775 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AEA00_00780 PF01037 Lrp/AsnC ligand binding domain AEA00_00785 PF00593 TonB dependent receptor AEA00_00785 PF07660 Secretin and TonB N terminus short domain AEA00_00785 PF07715 TonB-dependent Receptor Plug Domain AEA00_00790 PF01734 Patatin-like phospholipase AEA00_00800 PF00005 ABC transporter AEA00_00815 PF00005 ABC transporter AEA00_00815 PF00571 CBS domain AEA00_00820 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_00830 PF03781 Sulfatase-modifying factor enzyme 1 AEA00_00830 PF12867 DinB superfamily AEA00_00835 PF10017 Histidine-specific methyltransferase, SAM-dependent AEA00_00865 PF01883 Iron-sulfur cluster assembly protein AEA00_00865 PF10609 NUBPL iron-transfer P-loop NTPase AEA00_00870 PF00300 Histidine phosphatase superfamily (branch 1) AEA00_00875 PF04264 YceI-like domain AEA00_00880 PF13091 PLD-like domain AEA00_00885 PF03061 Thioesterase superfamily AEA00_00905 PF01161 Phosphatidylethanolamine-binding protein AEA00_00915 PF02673 Bacitracin resistance protein BacA AEA00_00920 PF00120 Glutamine synthetase, catalytic domain AEA00_00920 PF03951 Glutamine synthetase, beta-Grasp domain AEA00_00925 PF00543 Nitrogen regulatory protein P-II AEA00_00930 PF00909 Ammonium Transporter Family AEA00_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_00935 PF00512 His Kinase A (phospho-acceptor) domain AEA00_00935 PF00989 PAS fold AEA00_00940 PF02954 Bacterial regulatory protein, Fis family AEA00_00940 PF00072 Response regulator receiver domain AEA00_00940 PF00158 Sigma-54 interaction domain AEA00_00950 PF00080 Copper/zinc superoxide dismutase (SODC) AEA00_00955 PF00080 Copper/zinc superoxide dismutase (SODC) AEA00_00960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEA00_00970 PF00108 Thiolase, N-terminal domain AEA00_00970 PF02803 Thiolase, C-terminal domain AEA00_01010 PF00581 Rhodanese-like domain AEA00_01015 PF02556 Preprotein translocase subunit SecB AEA00_01020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AEA00_01020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AEA00_01030 PF00205 Thiamine pyrophosphate enzyme, central domain AEA00_01030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEA00_01030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AEA00_01045 PF00588 SpoU rRNA Methylase family AEA00_01060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AEA00_01060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AEA00_01065 PF13784 Fic/DOC family N-terminal AEA00_01065 PF02661 Fic/DOC family AEA00_01070 PF01555 DNA methylase AEA00_01080 PF00561 alpha/beta hydrolase fold AEA00_01085 PF03692 Putative zinc- or iron-chelating domain AEA00_01095 PF00501 AMP-binding enzyme AEA00_01100 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AEA00_01115 PF01820 D-ala D-ala ligase N-terminus AEA00_01115 PF07478 D-ala D-ala ligase C-terminus AEA00_01125 PF03109 ABC1 family AEA00_01130 PF00849 RNA pseudouridylate synthase AEA00_01140 PF00472 RF-1 domain AEA00_01150 PF01112 Asparaginase AEA00_01155 PF01432 Peptidase family M3 AEA00_01165 PF12706 Beta-lactamase superfamily domain AEA00_01180 PF12833 Helix-turn-helix domain AEA00_01190 PF01274 Malate synthase AEA00_01195 PF00463 Isocitrate lyase family AEA00_01200 PF00990 Diguanylate cyclase, GGDEF domain AEA00_01200 PF08448 PAS fold AEA00_01220 PF00326 Prolyl oligopeptidase family AEA00_01225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEA00_01225 PF00364 Biotin-requiring enzyme AEA00_01225 PF02785 Biotin carboxylase C-terminal domain AEA00_01225 PF00289 Biotin carboxylase, N-terminal domain AEA00_01235 PF01039 Carboxyl transferase domain AEA00_01240 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_01240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_01240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_01280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AEA00_01295 PF02492 CobW/HypB/UreG, nucleotide-binding domain AEA00_01295 PF07683 Cobalamin synthesis protein cobW C-terminal domain AEA00_01315 PF03969 AFG1-like ATPase AEA00_01325 PF01047 MarR family AEA00_01330 PF02566 OsmC-like protein AEA00_01340 PF07859 alpha/beta hydrolase fold AEA00_01355 PF00248 Aldo/keto reductase family AEA00_01360 PF16884 N-terminal domain of oxidoreductase AEA00_01360 PF00107 Zinc-binding dehydrogenase AEA00_01375 PF00849 RNA pseudouridylate synthase AEA00_01385 PF08482 ATP-dependent helicase C-terminal AEA00_01385 PF00271 Helicase conserved C-terminal domain AEA00_01385 PF00270 DEAD/DEAH box helicase AEA00_01385 PF04408 Helicase associated domain (HA2) AEA00_01390 PF00672 HAMP domain AEA00_01390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_01390 PF02203 Tar ligand binding domain homologue AEA00_01395 PF07308 Protein of unknown function (DUF1456) AEA00_01400 PF00576 HIUase/Transthyretin family AEA00_01405 PF13454 FAD-NAD(P)-binding AEA00_01425 PF00266 Aminotransferase class-V AEA00_01430 PF07687 Peptidase dimerisation domain AEA00_01430 PF01546 Peptidase family M20/M25/M40 AEA00_01435 PF03466 LysR substrate binding domain AEA00_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_01450 PF07690 Major Facilitator Superfamily AEA00_01460 PF13091 PLD-like domain AEA00_01470 PF01425 Amidase AEA00_01475 PF01156 Inosine-uridine preferring nucleoside hydrolase AEA00_01485 PF00860 Permease family AEA00_01490 PF00111 2Fe-2S iron-sulfur cluster binding domain AEA00_01495 PF00355 Rieske [2Fe-2S] domain AEA00_01500 PF03466 LysR substrate binding domain AEA00_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_01505 PF01026 TatD related DNase AEA00_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_01515 PF03466 LysR substrate binding domain AEA00_01520 PF07690 Major Facilitator Superfamily AEA00_01540 PF02146 Sir2 family AEA00_01545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEA00_01550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AEA00_01550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AEA00_01560 PF00551 Formyl transferase AEA00_01570 PF00106 short chain dehydrogenase AEA00_01580 PF02219 Methylenetetrahydrofolate reductase AEA00_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_01585 PF03466 LysR substrate binding domain AEA00_01590 PF03358 NADPH-dependent FMN reductase AEA00_01600 PF01717 Cobalamin-independent synthase, Catalytic domain AEA00_01600 PF08267 Cobalamin-independent synthase, N-terminal domain AEA00_01615 PF05368 NmrA-like family AEA00_01620 PF01638 HxlR-like helix-turn-helix AEA00_01630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_01630 PF02203 Tar ligand binding domain homologue AEA00_01630 PF00672 HAMP domain AEA00_01685 PF11008 Protein of unknown function (DUF2846) AEA00_01735 PF00589 Phage integrase family AEA00_01735 PF13495 Phage integrase, N-terminal SAM-like domain AEA00_01740 PF00920 Dehydratase family AEA00_01755 PF00132 Bacterial transferase hexapeptide (six repeats) AEA00_01760 PF07690 Major Facilitator Superfamily AEA00_01765 PF01966 HD domain AEA00_01765 PF11871 Domain of unknown function (DUF3391) AEA00_01785 PF00171 Aldehyde dehydrogenase family AEA00_01795 PF01494 FAD binding domain AEA00_01805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AEA00_01805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AEA00_01810 PF00230 Major intrinsic protein AEA00_01815 PF01266 FAD dependent oxidoreductase AEA00_01815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AEA00_01820 PF00455 DeoR C terminal sensor domain AEA00_01820 PF08220 DeoR-like helix-turn-helix domain AEA00_01830 PF00355 Rieske [2Fe-2S] domain AEA00_01835 PF01144 Coenzyme A transferase AEA00_01840 PF01144 Coenzyme A transferase AEA00_01845 PF02803 Thiolase, C-terminal domain AEA00_01845 PF00108 Thiolase, N-terminal domain AEA00_01850 PF00775 Dioxygenase AEA00_01850 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AEA00_01855 PF00775 Dioxygenase AEA00_01855 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AEA00_01860 PF10397 Adenylosuccinate lyase C-terminus AEA00_01860 PF00206 Lyase AEA00_01865 PF12146 Serine aminopeptidase, S33 AEA00_01870 PF02627 Carboxymuconolactone decarboxylase family AEA00_01880 PF09339 IclR helix-turn-helix domain AEA00_01880 PF01614 Bacterial transcriptional regulator AEA00_01890 PF07859 alpha/beta hydrolase fold AEA00_01895 PF10677 Protein of unknown function (DUF2490) AEA00_01900 PF13932 GidA associated domain AEA00_01900 PF01134 Glucose inhibited division protein A AEA00_01910 PF13291 ACT domain AEA00_01910 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_01930 PF13649 Methyltransferase domain AEA00_01940 PF12697 Alpha/beta hydrolase family AEA00_01950 PF00155 Aminotransferase class I and II AEA00_01955 PF06968 Biotin and Thiamin Synthesis associated domain AEA00_01955 PF04055 Radical SAM superfamily AEA00_01965 PF01040 UbiA prenyltransferase family AEA00_01975 PF13356 Arm DNA-binding domain AEA00_01975 PF00589 Phage integrase family AEA00_01985 PF07715 TonB-dependent Receptor Plug Domain AEA00_01985 PF00593 TonB dependent receptor AEA00_01995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AEA00_01995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AEA00_02010 PF07715 TonB-dependent Receptor Plug Domain AEA00_02010 PF00593 TonB dependent receptor AEA00_02015 PF05598 Transposase domain (DUF772) AEA00_02025 PF01527 Transposase AEA00_02030 PF13276 HTH-like domain AEA00_02030 PF13683 Integrase core domain AEA00_02040 PF00924 Mechanosensitive ion channel AEA00_02040 PF12795 Mechanosensitive ion channel porin domain AEA00_02040 PF12794 Mechanosensitive ion channel inner membrane domain 1 AEA00_02045 PF00884 Sulfatase AEA00_02050 PF03109 ABC1 family AEA00_02055 PF05661 Protein of unknown function (DUF808) AEA00_02065 PF00990 Diguanylate cyclase, GGDEF domain AEA00_02065 PF00563 EAL domain AEA00_02065 PF03707 Bacterial signalling protein N terminal repeat AEA00_02070 PF00534 Glycosyl transferases group 1 AEA00_02070 PF08323 Starch synthase catalytic domain AEA00_02075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AEA00_02075 PF02806 Alpha amylase, C-terminal all-beta domain AEA00_02075 PF00128 Alpha amylase, catalytic domain AEA00_02080 PF00128 Alpha amylase, catalytic domain AEA00_02080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AEA00_02080 PF11941 Domain of unknown function (DUF3459) AEA00_02085 PF02446 4-alpha-glucanotransferase AEA00_02090 PF00128 Alpha amylase, catalytic domain AEA00_02100 PF00128 Alpha amylase, catalytic domain AEA00_02100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AEA00_02105 PF13460 NAD(P)H-binding AEA00_02125 PF06903 VirK protein AEA00_02130 PF02321 Outer membrane efflux protein AEA00_02135 PF00440 Bacterial regulatory proteins, tetR family AEA00_02145 PF00873 AcrB/AcrD/AcrF family AEA00_02160 PF00364 Biotin-requiring enzyme AEA00_02160 PF02817 e3 binding domain AEA00_02160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AEA00_02170 PF02779 Transketolase, pyrimidine binding domain AEA00_02170 PF02780 Transketolase, C-terminal domain AEA00_02175 PF00676 Dehydrogenase E1 component AEA00_02185 PF03301 Tryptophan 2,3-dioxygenase AEA00_02190 PF00854 POT family AEA00_02200 PF01047 MarR family AEA00_02205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEA00_02210 PF04480 Protein of unknown function (DUF559) AEA00_02215 PF04209 homogentisate 1,2-dioxygenase AEA00_02235 PF03334 Na+/H+ antiporter subunit AEA00_02240 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AEA00_02250 PF00361 Proton-conducting membrane transporter AEA00_02255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AEA00_02260 PF00361 Proton-conducting membrane transporter AEA00_02260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AEA00_02260 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AEA00_02260 PF13244 Domain of unknown function (DUF4040) AEA00_02295 PF01259 SAICAR synthetase AEA00_02300 PF00226 DnaJ domain AEA00_02300 PF01556 DnaJ C terminal domain AEA00_02300 PF00684 DnaJ central domain AEA00_02310 PF00834 Ribulose-phosphate 3 epimerase family AEA00_02320 PF00781 Diacylglycerol kinase catalytic domain AEA00_02325 PF00425 chorismate binding enzyme AEA00_02325 PF04715 Anthranilate synthase component I, N terminal region AEA00_02330 PF00155 Aminotransferase class I and II AEA00_02345 PF00117 Glutamine amidotransferase class-I AEA00_02350 PF01613 Flavin reductase like domain AEA00_02355 PF00591 Glycosyl transferase family, a/b domain AEA00_02355 PF02885 Glycosyl transferase family, helical bundle domain AEA00_02360 PF00218 Indole-3-glycerol phosphate synthase AEA00_02370 PF00027 Cyclic nucleotide-binding domain AEA00_02370 PF00325 Bacterial regulatory proteins, crp family AEA00_02375 PF02675 S-adenosylmethionine decarboxylase AEA00_02380 PF00893 Small Multidrug Resistance protein AEA00_02385 PF03232 Ubiquinone biosynthesis protein COQ7 AEA00_02390 PF00572 Ribosomal protein L13 AEA00_02395 PF00380 Ribosomal protein S9/S16 AEA00_02410 PF00293 NUDIX domain AEA00_02420 PF00210 Ferritin-like domain AEA00_02425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AEA00_02425 PF00072 Response regulator receiver domain AEA00_02425 PF01627 Hpt domain AEA00_02425 PF00512 His Kinase A (phospho-acceptor) domain AEA00_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_02425 PF00672 HAMP domain AEA00_02430 PF00486 Transcriptional regulatory protein, C terminal AEA00_02430 PF00072 Response regulator receiver domain AEA00_02450 PF01521 Iron-sulphur cluster biosynthesis AEA00_02455 PF00293 NUDIX domain AEA00_02455 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AEA00_02455 PF09297 NADH pyrophosphatase zinc ribbon domain AEA00_02460 PF03186 CobD/Cbib protein AEA00_02460 PF17113 Regulatory signalling modulator protein AmpE AEA00_02485 PF07690 Major Facilitator Superfamily AEA00_02490 PF12805 FUSC-like inner membrane protein yccS AEA00_02495 PF02843 Phosphoribosylglycinamide synthetase, C domain AEA00_02495 PF02844 Phosphoribosylglycinamide synthetase, N domain AEA00_02495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AEA00_02500 PF01808 AICARFT/IMPCHase bienzyme AEA00_02500 PF02142 MGS-like domain AEA00_02505 PF01066 CDP-alcohol phosphatidyltransferase AEA00_02510 PF12146 Serine aminopeptidase, S33 AEA00_02510 PF12147 Putative methyltransferase AEA00_02515 PF00782 Dual specificity phosphatase, catalytic domain AEA00_02550 PF02954 Bacterial regulatory protein, Fis family AEA00_02560 PF01381 Helix-turn-helix AEA00_02585 PF02785 Biotin carboxylase C-terminal domain AEA00_02585 PF00289 Biotin carboxylase, N-terminal domain AEA00_02585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEA00_02595 PF00364 Biotin-requiring enzyme AEA00_02600 PF01220 Dehydroquinase class II AEA00_02605 PF02683 Cytochrome C biogenesis protein transmembrane region AEA00_02605 PF11412 Disulphide bond corrector protein DsbC AEA00_02610 PF03091 CutA1 divalent ion tolerance protein AEA00_02615 PF04231 Endonuclease I AEA00_02620 PF00166 Chaperonin 10 Kd subunit AEA00_02625 PF00118 TCP-1/cpn60 chaperonin family AEA00_02630 PF00271 Helicase conserved C-terminal domain AEA00_02630 PF00176 SNF2 family N-terminal domain AEA00_02635 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AEA00_02635 PF17191 RecG wedge domain AEA00_02635 PF00270 DEAD/DEAH box helicase AEA00_02645 PF01738 Dienelactone hydrolase family AEA00_02660 PF00593 TonB dependent receptor AEA00_02660 PF07715 TonB-dependent Receptor Plug Domain AEA00_02670 PF01527 Transposase AEA00_02675 PF13276 HTH-like domain AEA00_02675 PF13683 Integrase core domain AEA00_02680 PF00793 DAHP synthetase I family AEA00_02690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AEA00_02690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AEA00_02705 PF08450 SMP-30/Gluconolactonase/LRE-like region AEA00_02720 PF16220 Domain of unknown function (DUF4880) AEA00_02720 PF04773 FecR protein AEA00_02745 PF08335 GlnD PII-uridylyltransferase AEA00_02745 PF03710 Glutamate-ammonia ligase adenylyltransferase AEA00_02755 PF02592 Putative vitamin uptake transporter AEA00_02775 PF00881 Nitroreductase family AEA00_02780 PF04264 YceI-like domain AEA00_02790 PF03551 Transcriptional regulator PadR-like family AEA00_02790 PF13847 Methyltransferase domain AEA00_02795 PF16957 Malonate decarboxylase, alpha subunit, transporter AEA00_02800 PF06857 Malonate decarboxylase delta subunit (MdcD) AEA00_02805 PF01039 Carboxyl transferase domain AEA00_02815 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AEA00_02820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AEA00_02825 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_02825 PF00550 Phosphopantetheine attachment site AEA00_02825 PF00698 Acyl transferase domain AEA00_02825 PF16197 Ketoacyl-synthetase C-terminal extension AEA00_02825 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_02825 PF08659 KR domain AEA00_02835 PF07729 FCD domain AEA00_02835 PF00392 Bacterial regulatory proteins, gntR family AEA00_02865 PF07745 Glycosyl hydrolase family 53 AEA00_02870 PF17831 Pyruvate dehydrogenase E1 component middle domain AEA00_02870 PF00456 Transketolase, thiamine diphosphate binding domain AEA00_02875 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AEA00_02880 PF05598 Transposase domain (DUF772) AEA00_02915 PF13409 Glutathione S-transferase, N-terminal domain AEA00_02940 PF01433 Peptidase family M1 domain AEA00_02940 PF11838 ERAP1-like C-terminal domain AEA00_02975 PF12823 Domain of unknown function (DUF3817) AEA00_02975 PF03176 MMPL family AEA00_02985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AEA00_02985 PF00326 Prolyl oligopeptidase family AEA00_02990 PF07759 Protein of unknown function (DUF1615) AEA00_02995 PF05230 MASE2 domain AEA00_02995 PF00990 Diguanylate cyclase, GGDEF domain AEA00_03000 PF02082 Transcriptional regulator AEA00_03010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_03010 PF13192 Thioredoxin domain AEA00_03040 PF00892 EamA-like transporter family AEA00_03045 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEA00_03055 PF03330 Lytic transglycolase AEA00_03060 PF00041 Fibronectin type III domain AEA00_03060 PF00553 Cellulose binding domain AEA00_03060 PF01341 Glycosyl hydrolases family 6 AEA00_03065 PF00324 Amino acid permease AEA00_03070 PF01544 CorA-like Mg2+ transporter protein AEA00_03085 PF01204 Trehalase AEA00_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AEA00_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AEA00_03115 PF08447 PAS fold AEA00_03115 PF05231 MASE1 AEA00_03115 PF00990 Diguanylate cyclase, GGDEF domain AEA00_03115 PF00563 EAL domain AEA00_03115 PF13426 PAS domain AEA00_03115 PF08448 PAS fold AEA00_03120 PF00672 HAMP domain AEA00_03120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_03120 PF02203 Tar ligand binding domain homologue AEA00_03125 PF00553 Cellulose binding domain AEA00_03125 PF00150 Cellulase (glycosyl hydrolase family 5) AEA00_03130 PF01740 STAS domain AEA00_03130 PF00916 Sulfate permease family AEA00_03135 PF08448 PAS fold AEA00_03135 PF00990 Diguanylate cyclase, GGDEF domain AEA00_03140 PF00593 TonB dependent receptor AEA00_03140 PF07715 TonB-dependent Receptor Plug Domain AEA00_03140 PF07660 Secretin and TonB N terminus short domain AEA00_03150 PF02080 TrkA-C domain AEA00_03150 PF03600 Citrate transporter AEA00_03155 PF13632 Glycosyl transferase family group 2 AEA00_03165 PF07694 5TMR of 5TMR-LYT AEA00_03165 PF06580 Histidine kinase AEA00_03170 PF04397 LytTr DNA-binding domain AEA00_03170 PF00072 Response regulator receiver domain AEA00_03175 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AEA00_03175 PF03900 Porphobilinogen deaminase, C-terminal domain AEA00_03200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AEA00_03200 PF00326 Prolyl oligopeptidase family AEA00_03215 PF00155 Aminotransferase class I and II AEA00_03220 PF00326 Prolyl oligopeptidase family AEA00_03220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AEA00_03225 PF04304 Protein of unknown function (DUF454) AEA00_03235 PF01678 Diaminopimelate epimerase AEA00_03245 PF02899 Phage integrase, N-terminal SAM-like domain AEA00_03245 PF00589 Phage integrase family AEA00_03250 PF13333 Integrase core domain AEA00_03250 PF00665 Integrase core domain AEA00_03250 PF13276 HTH-like domain AEA00_03255 PF01527 Transposase AEA00_03260 PF00227 Proteasome subunit AEA00_03265 PF07724 AAA domain (Cdc48 subfamily) AEA00_03265 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_03265 PF10431 C-terminal, D2-small domain, of ClpB protein AEA00_03280 PF13673 Acetyltransferase (GNAT) domain AEA00_03285 PF13533 Biotin-lipoyl like AEA00_03295 PF01209 ubiE/COQ5 methyltransferase family AEA00_03300 PF03707 Bacterial signalling protein N terminal repeat AEA00_03300 PF00563 EAL domain AEA00_03300 PF00990 Diguanylate cyclase, GGDEF domain AEA00_03305 PF01433 Peptidase family M1 domain AEA00_03305 PF11838 ERAP1-like C-terminal domain AEA00_03320 PF13360 PQQ-like domain AEA00_03325 PF01527 Transposase AEA00_03330 PF13333 Integrase core domain AEA00_03330 PF00665 Integrase core domain AEA00_03330 PF13276 HTH-like domain AEA00_03335 PF13360 PQQ-like domain AEA00_03340 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEA00_03355 PF00107 Zinc-binding dehydrogenase AEA00_03355 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_03360 PF00593 TonB dependent receptor AEA00_03360 PF07715 TonB-dependent Receptor Plug Domain AEA00_03360 PF07660 Secretin and TonB N terminus short domain AEA00_03370 PF00158 Sigma-54 interaction domain AEA00_03370 PF02954 Bacterial regulatory protein, Fis family AEA00_03370 PF01590 GAF domain AEA00_03375 PF00294 pfkB family carbohydrate kinase AEA00_03385 PF04085 rod shape-determining protein MreC AEA00_03395 PF00905 Penicillin binding protein transpeptidase domain AEA00_03395 PF03717 Penicillin-binding Protein dimerisation domain AEA00_03400 PF01098 Cell cycle protein AEA00_03405 PF02534 Type IV secretory system Conjugative DNA transfer AEA00_03410 PF01527 Transposase AEA00_03415 PF13276 HTH-like domain AEA00_03415 PF13683 Integrase core domain AEA00_03440 PF05598 Transposase domain (DUF772) AEA00_03450 PF00295 Glycosyl hydrolases family 28 AEA00_03455 PF13406 Transglycosylase SLT domain AEA00_03460 PF03330 Lytic transglycolase AEA00_03460 PF05036 Sporulation related domain AEA00_03465 PF00768 D-alanyl-D-alanine carboxypeptidase AEA00_03465 PF07943 Penicillin-binding protein 5, C-terminal domain AEA00_03480 PF04359 Protein of unknown function (DUF493) AEA00_03485 PF03099 Biotin/lipoate A/B protein ligase family AEA00_03490 PF04055 Radical SAM superfamily AEA00_03490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AEA00_03495 PF17804 Tail specific protease N-terminal domain AEA00_03495 PF03572 Peptidase family S41 AEA00_03495 PF00595 PDZ domain AEA00_03495 PF11818 C-terminal domain of tail specific protease (DUF3340) AEA00_03505 PF03466 LysR substrate binding domain AEA00_03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_03515 PF00293 NUDIX domain AEA00_03515 PF01467 Cytidylyltransferase-like AEA00_03550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AEA00_03550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AEA00_03555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AEA00_03555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AEA00_03560 PF04972 BON domain AEA00_03565 PF01590 GAF domain AEA00_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_03565 PF00512 His Kinase A (phospho-acceptor) domain AEA00_03565 PF08446 PAS fold AEA00_03565 PF00360 Phytochrome region AEA00_03570 PF00072 Response regulator receiver domain AEA00_03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_03575 PF00512 His Kinase A (phospho-acceptor) domain AEA00_03580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AEA00_03620 PF00263 Bacterial type II and III secretion system protein AEA00_03620 PF03958 Bacterial type II/III secretion system short domain AEA00_03625 PF00437 Type II/IV secretion system protein AEA00_03630 PF00482 Type II secretion system (T2SS), protein F AEA00_03635 PF07963 Prokaryotic N-terminal methylation motif AEA00_03635 PF08334 Type II secretion system (T2SS), protein G AEA00_03645 PF02501 Type II secretion system (T2SS), protein I AEA00_03645 PF07963 Prokaryotic N-terminal methylation motif AEA00_03650 PF11612 Type II secretion system (T2SS), protein J AEA00_03650 PF07963 Prokaryotic N-terminal methylation motif AEA00_03655 PF03934 Type II secretion system (T2SS), protein K AEA00_03675 PF00392 Bacterial regulatory proteins, gntR family AEA00_03675 PF07702 UTRA domain AEA00_03680 PF07690 Major Facilitator Superfamily AEA00_03685 PF00356 Bacterial regulatory proteins, lacI family AEA00_03690 PF01380 SIS domain AEA00_03695 PF01979 Amidohydrolase family AEA00_03710 PF01743 Poly A polymerase head domain AEA00_03710 PF12627 Probable RNA and SrmB- binding site of polymerase A AEA00_03710 PF01966 HD domain AEA00_03715 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AEA00_03715 PF01464 Transglycosylase SLT domain AEA00_03720 PF07715 TonB-dependent Receptor Plug Domain AEA00_03720 PF00593 TonB dependent receptor AEA00_03725 PF00732 GMC oxidoreductase AEA00_03725 PF05199 GMC oxidoreductase AEA00_03730 PF00171 Aldehyde dehydrogenase family AEA00_03735 PF02028 BCCT, betaine/carnitine/choline family transporter AEA00_03745 PF01323 DSBA-like thioredoxin domain AEA00_03755 PF00034 Cytochrome c AEA00_03760 PF01926 50S ribosome-binding GTPase AEA00_03765 PF04107 Glutamate-cysteine ligase family 2(GCS2) AEA00_03770 PF00512 His Kinase A (phospho-acceptor) domain AEA00_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_03770 PF00672 HAMP domain AEA00_03775 PF00072 Response regulator receiver domain AEA00_03775 PF00486 Transcriptional regulatory protein, C terminal AEA00_03795 PF03466 LysR substrate binding domain AEA00_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_03800 PF02583 Metal-sensitive transcriptional repressor AEA00_03805 PF00107 Zinc-binding dehydrogenase AEA00_03805 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_03810 PF04828 Glutathione-dependent formaldehyde-activating enzyme AEA00_03815 PF00756 Putative esterase AEA00_03820 PF00392 Bacterial regulatory proteins, gntR family AEA00_03820 PF00155 Aminotransferase class I and II AEA00_03825 PF02567 Phenazine biosynthesis-like protein AEA00_03830 PF00892 EamA-like transporter family AEA00_03840 PF02645 Uncharacterised protein, DegV family COG1307 AEA00_03880 PF01979 Amidohydrolase family AEA00_03885 PF01979 Amidohydrolase family AEA00_03900 PF00462 Glutaredoxin AEA00_03905 PF01522 Polysaccharide deacetylase AEA00_03920 PF00155 Aminotransferase class I and II AEA00_03930 PF03193 RsgA GTPase AEA00_03945 PF00128 Alpha amylase, catalytic domain AEA00_03960 PF00356 Bacterial regulatory proteins, lacI family AEA00_03965 PF00106 short chain dehydrogenase AEA00_03970 PF03600 Citrate transporter AEA00_03980 PF00072 Response regulator receiver domain AEA00_03980 PF00486 Transcriptional regulatory protein, C terminal AEA00_03985 PF00512 His Kinase A (phospho-acceptor) domain AEA00_03985 PF08521 Two-component sensor kinase N-terminal AEA00_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_04000 PF00072 Response regulator receiver domain AEA00_04000 PF00196 Bacterial regulatory proteins, luxR family AEA00_04010 PF00512 His Kinase A (phospho-acceptor) domain AEA00_04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_04020 PF00375 Sodium:dicarboxylate symporter family AEA00_04025 PF01515 Phosphate acetyl/butaryl transferase AEA00_04025 PF03949 Malic enzyme, NAD binding domain AEA00_04025 PF00390 Malic enzyme, N-terminal domain AEA00_04050 PF03279 Bacterial lipid A biosynthesis acyltransferase AEA00_04055 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AEA00_04060 PF02321 Outer membrane efflux protein AEA00_04075 PF00563 EAL domain AEA00_04075 PF03707 Bacterial signalling protein N terminal repeat AEA00_04075 PF13188 PAS domain AEA00_04075 PF00990 Diguanylate cyclase, GGDEF domain AEA00_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_04085 PF00330 Aconitase family (aconitate hydratase) AEA00_04090 PF00694 Aconitase C-terminal domain AEA00_04095 PF08241 Methyltransferase domain AEA00_04100 PF00180 Isocitrate/isopropylmalate dehydrogenase AEA00_04105 PF08502 LeuA allosteric (dimerisation) domain AEA00_04105 PF00682 HMGL-like AEA00_04110 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_04120 PF00205 Thiamine pyrophosphate enzyme, central domain AEA00_04120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEA00_04120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AEA00_04125 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AEA00_04125 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AEA00_04135 PF00672 HAMP domain AEA00_04135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_04135 PF02203 Tar ligand binding domain homologue AEA00_04140 PF07676 WD40-like Beta Propeller Repeat AEA00_04140 PF00326 Prolyl oligopeptidase family AEA00_04150 PF13667 ThiC-associated domain AEA00_04150 PF01964 Radical SAM ThiC family AEA00_04155 PF18500 CadC C-terminal domain 1 AEA00_04155 PF00486 Transcriptional regulatory protein, C terminal AEA00_04160 PF12833 Helix-turn-helix domain AEA00_04165 PF07715 TonB-dependent Receptor Plug Domain AEA00_04165 PF00593 TonB dependent receptor AEA00_04175 PF00719 Inorganic pyrophosphatase AEA00_04185 PF03030 Inorganic H+ pyrophosphatase AEA00_04215 PF13276 HTH-like domain AEA00_04215 PF13683 Integrase core domain AEA00_04220 PF01527 Transposase AEA00_04245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AEA00_04260 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AEA00_04265 PF05598 Transposase domain (DUF772) AEA00_04275 PF00365 Phosphofructokinase AEA00_04285 PF01225 Mur ligase family, catalytic domain AEA00_04285 PF08245 Mur ligase middle domain AEA00_04285 PF02875 Mur ligase family, glutamate ligase domain AEA00_04295 PF01062 Bestrophin, RFP-TM, chloride channel AEA00_04300 PF01569 PAP2 superfamily AEA00_04320 PF00520 Ion transport protein AEA00_04320 PF00027 Cyclic nucleotide-binding domain AEA00_04325 PF00202 Aminotransferase class-III AEA00_04340 PF01593 Flavin containing amine oxidoreductase AEA00_04345 PF00034 Cytochrome c AEA00_04345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AEA00_04355 PF00155 Aminotransferase class I and II AEA00_04360 PF00127 Copper binding proteins, plastocyanin/azurin family AEA00_04365 PF00196 Bacterial regulatory proteins, luxR family AEA00_04365 PF17874 MalT-like TPR region AEA00_04370 PF00202 Aminotransferase class-III AEA00_04380 PF02581 Thiamine monophosphate synthase AEA00_04385 PF00301 Rubredoxin AEA00_04390 PF13369 Transglutaminase-like superfamily AEA00_04400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AEA00_04410 PF01812 5-formyltetrahydrofolate cyclo-ligase family AEA00_04415 PF05164 Cell division protein ZapA AEA00_04425 PF03695 Uncharacterised protein family (UPF0149) AEA00_04430 PF05195 Aminopeptidase P, N-terminal domain AEA00_04430 PF00557 Metallopeptidase family M24 AEA00_04440 PF04273 Putative phosphatase (DUF442) AEA00_04440 PF00753 Metallo-beta-lactamase superfamily AEA00_04460 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_04465 PF03459 TOBE domain AEA00_04465 PF00005 ABC transporter AEA00_04485 PF03965 Penicillinase repressor AEA00_04505 PF01476 LysM domain AEA00_04505 PF03734 L,D-transpeptidase catalytic domain AEA00_04510 PF04225 Opacity-associated protein A LysM-like domain AEA00_04510 PF01551 Peptidase family M23 AEA00_04525 PF13683 Integrase core domain AEA00_04525 PF13276 HTH-like domain AEA00_04530 PF12146 Serine aminopeptidase, S33 AEA00_04535 PF00456 Transketolase, thiamine diphosphate binding domain AEA00_04535 PF02779 Transketolase, pyrimidine binding domain AEA00_04535 PF02780 Transketolase, C-terminal domain AEA00_04540 PF00375 Sodium:dicarboxylate symporter family AEA00_04550 PF07584 Aerotolerance regulator N-terminal AEA00_04550 PF00092 von Willebrand factor type A domain AEA00_04570 PF17863 AAA lid domain AEA00_04570 PF07726 ATPase family associated with various cellular activities (AAA) AEA00_04575 PF00263 Bacterial type II and III secretion system protein AEA00_04575 PF07660 Secretin and TonB N terminus short domain AEA00_04575 PF03958 Bacterial type II/III secretion system short domain AEA00_04575 PF11741 AMIN domain AEA00_04600 PF00912 Transglycosylase AEA00_04600 PF17092 Penicillin-binding protein OB-like domain AEA00_04600 PF00905 Penicillin binding protein transpeptidase domain AEA00_04610 PF00285 Citrate synthase, C-terminal domain AEA00_04615 PF01197 Ribosomal protein L31 AEA00_04620 PF01156 Inosine-uridine preferring nucleoside hydrolase AEA00_04625 PF00270 DEAD/DEAH box helicase AEA00_04625 PF17191 RecG wedge domain AEA00_04625 PF00271 Helicase conserved C-terminal domain AEA00_04630 PF01042 Endoribonuclease L-PSP AEA00_04635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AEA00_04635 PF08666 SAF domain AEA00_04640 PF03573 outer membrane porin, OprD family AEA00_04645 PF13378 Enolase C-terminal domain-like AEA00_04645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEA00_04650 PF07690 Major Facilitator Superfamily AEA00_04655 PF00171 Aldehyde dehydrogenase family AEA00_04660 PF00701 Dihydrodipicolinate synthetase family AEA00_04665 PF03466 LysR substrate binding domain AEA00_04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_04670 PF02824 TGS domain AEA00_04670 PF04607 Region found in RelA / SpoT proteins AEA00_04670 PF13291 ACT domain AEA00_04675 PF01192 RNA polymerase Rpb6 AEA00_04680 PF00625 Guanylate kinase AEA00_04685 PF03755 YicC-like family, N-terminal region AEA00_04685 PF08340 Domain of unknown function (DUF1732) AEA00_04690 PF03725 3' exoribonuclease family, domain 2 AEA00_04690 PF01138 3' exoribonuclease family, domain 1 AEA00_04695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEA00_04700 PF01725 Ham1 family AEA00_04705 PF04055 Radical SAM superfamily AEA00_04705 PF06969 HemN C-terminal domain AEA00_04720 PF00557 Metallopeptidase family M24 AEA00_04730 PF03922 OmpW family AEA00_04745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AEA00_04745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AEA00_04765 PF00162 Phosphoglycerate kinase AEA00_04775 PF02887 Pyruvate kinase, alpha/beta domain AEA00_04775 PF00224 Pyruvate kinase, barrel domain AEA00_04780 PF00274 Fructose-bisphosphate aldolase class-I AEA00_04785 PF01661 Macro domain AEA00_04795 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_04800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AEA00_04800 PF14824 Sirohaem biosynthesis protein central AEA00_04800 PF10414 Sirohaem synthase dimerisation region AEA00_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_04805 PF03466 LysR substrate binding domain AEA00_04815 PF00072 Response regulator receiver domain AEA00_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_04815 PF00672 HAMP domain AEA00_04815 PF01627 Hpt domain AEA00_04815 PF00512 His Kinase A (phospho-acceptor) domain AEA00_04835 PF01507 Phosphoadenosine phosphosulfate reductase family AEA00_04840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AEA00_04840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AEA00_04845 PF00175 Oxidoreductase NAD-binding domain AEA00_04845 PF00258 Flavodoxin AEA00_04845 PF00667 FAD binding domain AEA00_04850 PF01507 Phosphoadenosine phosphosulfate reductase family AEA00_04855 PF00009 Elongation factor Tu GTP binding domain AEA00_04860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_04860 PF00529 HlyD membrane-fusion protein of T1SS AEA00_04865 PF00873 AcrB/AcrD/AcrF family AEA00_04870 PF11838 ERAP1-like C-terminal domain AEA00_04870 PF01433 Peptidase family M1 domain AEA00_04880 PF01235 Sodium:alanine symporter family AEA00_04885 PF00588 SpoU rRNA Methylase family AEA00_04885 PF08032 RNA 2'-O ribose methyltransferase substrate binding AEA00_04890 PF00135 Carboxylesterase family AEA00_04895 PF10566 Glycoside hydrolase 97 AEA00_04895 PF14508 Glycosyl-hydrolase 97 N-terminal AEA00_04895 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AEA00_04900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AEA00_04900 PF00703 Glycosyl hydrolases family 2 AEA00_04900 PF16353 Domain of unknown function(DUF4981) AEA00_04900 PF02837 Glycosyl hydrolases family 2, sugar binding domain AEA00_04900 PF02929 Beta galactosidase small chain AEA00_04910 PF01341 Glycosyl hydrolases family 6 AEA00_04910 PF00553 Cellulose binding domain AEA00_04910 PF00041 Fibronectin type III domain AEA00_04915 PF00356 Bacterial regulatory proteins, lacI family AEA00_04930 PF01741 Large-conductance mechanosensitive channel, MscL AEA00_04935 PF01557 Fumarylacetoacetate (FAA) hydrolase family AEA00_04950 PF02080 TrkA-C domain AEA00_04950 PF03600 Citrate transporter AEA00_04955 PF02390 Putative methyltransferase AEA00_04960 PF05690 Thiazole biosynthesis protein ThiG AEA00_04970 PF03797 Autotransporter beta-domain AEA00_04970 PF00657 GDSL-like Lipase/Acylhydrolase AEA00_04980 PF00589 Phage integrase family AEA00_04980 PF14659 Phage integrase, N-terminal SAM-like domain AEA00_04980 PF13356 Arm DNA-binding domain AEA00_05000 PF01381 Helix-turn-helix AEA00_05005 PF03466 LysR substrate binding domain AEA00_05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_05020 PF13276 HTH-like domain AEA00_05020 PF13683 Integrase core domain AEA00_05025 PF01527 Transposase AEA00_05050 PF01527 Transposase AEA00_05055 PF13683 Integrase core domain AEA00_05055 PF13276 HTH-like domain AEA00_05060 PF13683 Integrase core domain AEA00_05060 PF13276 HTH-like domain AEA00_05065 PF01527 Transposase AEA00_05080 PF08448 PAS fold AEA00_05080 PF08447 PAS fold AEA00_05080 PF00990 Diguanylate cyclase, GGDEF domain AEA00_05080 PF00563 EAL domain AEA00_05125 PF13333 Integrase core domain AEA00_05125 PF13276 HTH-like domain AEA00_05125 PF00665 Integrase core domain AEA00_05145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AEA00_05145 PF00128 Alpha amylase, catalytic domain AEA00_05150 PF08443 RimK-like ATP-grasp domain AEA00_05150 PF18030 RimK PreATP-grasp domain AEA00_05155 PF00486 Transcriptional regulatory protein, C terminal AEA00_05155 PF00072 Response regulator receiver domain AEA00_05160 PF00989 PAS fold AEA00_05160 PF11808 Phosphate regulon sensor protein PhoR AEA00_05160 PF00512 His Kinase A (phospho-acceptor) domain AEA00_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_05180 PF05598 Transposase domain (DUF772) AEA00_05185 PF01121 Dephospho-CoA kinase AEA00_05190 PF01478 Type IV leader peptidase family AEA00_05190 PF06750 Bacterial Peptidase A24 N-terminal domain AEA00_05195 PF00482 Type II secretion system (T2SS), protein F AEA00_05200 PF00114 Pilin (bacterial filament) AEA00_05200 PF07963 Prokaryotic N-terminal methylation motif AEA00_05205 PF00114 Pilin (bacterial filament) AEA00_05205 PF07963 Prokaryotic N-terminal methylation motif AEA00_05210 PF00437 Type II/IV secretion system protein AEA00_05210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AEA00_05215 PF00072 Response regulator receiver domain AEA00_05215 PF00158 Sigma-54 interaction domain AEA00_05215 PF02954 Bacterial regulatory protein, Fis family AEA00_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_05220 PF00512 His Kinase A (phospho-acceptor) domain AEA00_05225 PF00549 CoA-ligase AEA00_05225 PF08442 ATP-grasp domain AEA00_05230 PF00549 CoA-ligase AEA00_05230 PF02629 CoA binding domain AEA00_05245 PF02540 NAD synthase AEA00_05245 PF00795 Carbon-nitrogen hydrolase AEA00_05255 PF13525 Outer membrane lipoprotein AEA00_05260 PF00849 RNA pseudouridylate synthase AEA00_05280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_05280 PF00672 HAMP domain AEA00_05280 PF02203 Tar ligand binding domain homologue AEA00_05285 PF01011 PQQ enzyme repeat AEA00_05290 PF00982 Glycosyltransferase family 20 AEA00_05295 PF00723 Glycosyl hydrolases family 15 AEA00_05300 PF02358 Trehalose-phosphatase AEA00_05305 PF07715 TonB-dependent Receptor Plug Domain AEA00_05305 PF00593 TonB dependent receptor AEA00_05340 PF01541 GIY-YIG catalytic domain AEA00_05345 PF00005 ABC transporter AEA00_05350 PF02861 Clp amino terminal domain, pathogenicity island component AEA00_05350 PF10431 C-terminal, D2-small domain, of ClpB protein AEA00_05350 PF07724 AAA domain (Cdc48 subfamily) AEA00_05350 PF17871 AAA lid domain AEA00_05350 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_05360 PF01053 Cys/Met metabolism PLP-dependent enzyme AEA00_05365 PF00593 TonB dependent receptor AEA00_05365 PF07715 TonB-dependent Receptor Plug Domain AEA00_05380 PF12557 Cob(I)alamin adenosyltransferase N terminal AEA00_05380 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AEA00_05385 PF07685 CobB/CobQ-like glutamine amidotransferase domain AEA00_05385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AEA00_05390 PF17113 Regulatory signalling modulator protein AmpE AEA00_05390 PF03186 CobD/Cbib protein AEA00_05395 PF00155 Aminotransferase class I and II AEA00_05400 PF07685 CobB/CobQ-like glutamine amidotransferase domain AEA00_05400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AEA00_05405 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AEA00_05410 PF02277 Phosphoribosyltransferase AEA00_05420 PF02654 Cobalamin-5-phosphate synthase AEA00_05430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AEA00_05430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AEA00_05435 PF04183 IucA / IucC family AEA00_05435 PF06276 Ferric iron reductase FhuF-like transporter AEA00_05440 PF07690 Major Facilitator Superfamily AEA00_05445 PF06276 Ferric iron reductase FhuF-like transporter AEA00_05445 PF04183 IucA / IucC family AEA00_05455 PF07715 TonB-dependent Receptor Plug Domain AEA00_05455 PF00593 TonB dependent receptor AEA00_05455 PF07660 Secretin and TonB N terminus short domain AEA00_05465 PF00999 Sodium/hydrogen exchanger family AEA00_05465 PF02254 TrkA-N domain AEA00_05470 PF00067 Cytochrome P450 AEA00_05475 PF07715 TonB-dependent Receptor Plug Domain AEA00_05475 PF00593 TonB dependent receptor AEA00_05480 PF07715 TonB-dependent Receptor Plug Domain AEA00_05480 PF00593 TonB dependent receptor AEA00_05490 PF00593 TonB dependent receptor AEA00_05490 PF07715 TonB-dependent Receptor Plug Domain AEA00_05495 PF12848 ABC transporter AEA00_05495 PF00005 ABC transporter AEA00_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_05505 PF03466 LysR substrate binding domain AEA00_05515 PF07859 alpha/beta hydrolase fold AEA00_05515 PF13472 GDSL-like Lipase/Acylhydrolase family AEA00_05520 PF04185 Phosphoesterase family AEA00_05520 PF05506 Domain of unknown function (DUF756) AEA00_05530 PF00982 Glycosyltransferase family 20 AEA00_05530 PF05116 Sucrose-6F-phosphate phosphohydrolase AEA00_05535 PF07690 Major Facilitator Superfamily AEA00_05555 PF02938 GAD domain AEA00_05555 PF00152 tRNA synthetases class II (D, K and N) AEA00_05555 PF01336 OB-fold nucleic acid binding domain AEA00_05570 PF01709 Transcriptional regulator AEA00_05575 PF02075 Crossover junction endodeoxyribonuclease RuvC AEA00_05580 PF07499 RuvA, C-terminal domain AEA00_05580 PF01330 RuvA N terminal domain AEA00_05585 PF02705 K+ potassium transporter AEA00_05595 PF05496 Holliday junction DNA helicase RuvB P-loop domain AEA00_05595 PF05491 RuvB C-terminal winged helix domain AEA00_05595 PF17864 RuvB AAA lid domain AEA00_05600 PF03061 Thioesterase superfamily AEA00_05605 PF01618 MotA/TolQ/ExbB proton channel family AEA00_05610 PF02472 Biopolymer transport protein ExbD/TolR AEA00_05620 PF04052 TolB amino-terminal domain AEA00_05620 PF07676 WD40-like Beta Propeller Repeat AEA00_05625 PF00691 OmpA family AEA00_05635 PF04055 Radical SAM superfamily AEA00_05640 PF06508 Queuosine biosynthesis protein QueC AEA00_05675 PF00654 Voltage gated chloride channel AEA00_05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_05680 PF03466 LysR substrate binding domain AEA00_05705 PF01479 S4 domain AEA00_05705 PF00849 RNA pseudouridylate synthase AEA00_05725 PF00271 Helicase conserved C-terminal domain AEA00_05725 PF09382 RQC domain AEA00_05725 PF16124 RecQ zinc-binding AEA00_05725 PF00270 DEAD/DEAH box helicase AEA00_05725 PF00570 HRDC domain AEA00_05730 PF00210 Ferritin-like domain AEA00_05735 PF04408 Helicase associated domain (HA2) AEA00_05735 PF11898 Domain of unknown function (DUF3418) AEA00_05735 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AEA00_05735 PF00270 DEAD/DEAH box helicase AEA00_05735 PF00271 Helicase conserved C-terminal domain AEA00_05745 PF02685 Glucokinase AEA00_05760 PF04055 Radical SAM superfamily AEA00_05760 PF13186 Iron-sulfur cluster-binding domain AEA00_05765 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AEA00_05770 PF03070 TENA/THI-4/PQQC family AEA00_05775 PF12706 Beta-lactamase superfamily domain AEA00_05780 PF02824 TGS domain AEA00_05780 PF04607 Region found in RelA / SpoT proteins AEA00_05780 PF13291 ACT domain AEA00_05790 PF00535 Glycosyl transferase family 2 AEA00_05795 PF00912 Transglycosylase AEA00_05795 PF14814 Bifunctional transglycosylase second domain AEA00_05795 PF00905 Penicillin binding protein transpeptidase domain AEA00_05805 PF13307 Helicase C-terminal domain AEA00_05805 PF04851 Type III restriction enzyme, res subunit AEA00_05810 PF00814 Glycoprotease family AEA00_05815 PF03747 ADP-ribosylglycohydrolase AEA00_05825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AEA00_05825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AEA00_05830 PF00072 Response regulator receiver domain AEA00_05835 PF00072 Response regulator receiver domain AEA00_05840 PF01584 CheW-like domain AEA00_05845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_05845 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AEA00_05850 PF01627 Hpt domain AEA00_05850 PF00072 Response regulator receiver domain AEA00_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_05850 PF01584 CheW-like domain AEA00_05865 PF13302 Acetyltransferase (GNAT) domain AEA00_05875 PF04542 Sigma-70 region 2 AEA00_05875 PF08281 Sigma-70, region 4 AEA00_05880 PF12034 Domain of unknown function (DUF3520) AEA00_05880 PF00092 von Willebrand factor type A domain AEA00_05880 PF12450 von Willebrand factor AEA00_05885 PF01112 Asparaginase AEA00_05890 PF03932 CutC family AEA00_05895 PF00067 Cytochrome P450 AEA00_05930 PF18766 SWI2/SNF2 ATPase AEA00_05930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AEA00_05930 PF11867 Domain of unknown function (DUF3387) AEA00_05945 PF12161 HsdM N-terminal domain AEA00_05945 PF02384 N-6 DNA Methylase AEA00_05965 PF01527 Transposase AEA00_05970 PF13333 Integrase core domain AEA00_05970 PF13276 HTH-like domain AEA00_05970 PF00665 Integrase core domain AEA00_05980 PF01301 Glycosyl hydrolases family 35 AEA00_05985 PF17678 Glycosyl hydrolase family 92 N-terminal domain AEA00_05985 PF07971 Glycosyl hydrolase family 92 AEA00_05995 PF14310 Fibronectin type III-like domain AEA00_05995 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_05995 PF07691 PA14 domain AEA00_05995 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_06005 PF02838 Glycosyl hydrolase family 20, domain 2 AEA00_06005 PF07691 PA14 domain AEA00_06005 PF00728 Glycosyl hydrolase family 20, catalytic domain AEA00_06010 PF00704 Glycosyl hydrolases family 18 AEA00_06010 PF01476 LysM domain AEA00_06025 PF02685 Glucokinase AEA00_06030 PF04452 RNA methyltransferase AEA00_06035 PF00202 Aminotransferase class-III AEA00_06040 PF00293 NUDIX domain AEA00_06045 PF00459 Inositol monophosphatase family AEA00_06050 PF03819 MazG nucleotide pyrophosphohydrolase domain AEA00_06055 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AEA00_06060 PF01145 SPFH domain / Band 7 family AEA00_06060 PF16200 C-terminal region of band_7 AEA00_06070 PF01571 Aminomethyltransferase folate-binding domain AEA00_06070 PF08669 Glycine cleavage T-protein C-terminal barrel domain AEA00_06075 PF01597 Glycine cleavage H-protein AEA00_06100 PF09317 Domain of unknown function (DUF1974) AEA00_06100 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_06100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_06100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_06110 PF00440 Bacterial regulatory proteins, tetR family AEA00_06115 PF07715 TonB-dependent Receptor Plug Domain AEA00_06115 PF00593 TonB dependent receptor AEA00_06125 PF01430 Hsp33 protein AEA00_06130 PF00912 Transglycosylase AEA00_06135 PF00535 Glycosyl transferase family 2 AEA00_06140 PF00571 CBS domain AEA00_06140 PF00478 IMP dehydrogenase / GMP reductase domain AEA00_06145 PF05170 AsmA family AEA00_06150 PF03006 Haemolysin-III related AEA00_06155 PF00009 Elongation factor Tu GTP binding domain AEA00_06155 PF16658 Class II release factor RF3, C-terminal domain AEA00_06160 PF01551 Peptidase family M23 AEA00_06160 PF08460 Bacterial SH3 domain AEA00_06165 PF00561 alpha/beta hydrolase fold AEA00_06170 PF01053 Cys/Met metabolism PLP-dependent enzyme AEA00_06175 PF00696 Amino acid kinase family AEA00_06175 PF00742 Homoserine dehydrogenase AEA00_06175 PF03447 Homoserine dehydrogenase, NAD binding domain AEA00_06180 PF12697 Alpha/beta hydrolase family AEA00_06185 PF03315 Serine dehydratase beta chain AEA00_06185 PF03313 Serine dehydratase alpha chain AEA00_06205 PF04264 YceI-like domain AEA00_06210 PF17149 Periplasmic sensor domain found in signal transduction proteins AEA00_06210 PF00072 Response regulator receiver domain AEA00_06210 PF01627 Hpt domain AEA00_06210 PF00512 His Kinase A (phospho-acceptor) domain AEA00_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_06210 PF00672 HAMP domain AEA00_06220 PF17149 Periplasmic sensor domain found in signal transduction proteins AEA00_06220 PF00072 Response regulator receiver domain AEA00_06220 PF01627 Hpt domain AEA00_06220 PF00512 His Kinase A (phospho-acceptor) domain AEA00_06220 PF00672 HAMP domain AEA00_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_06225 PF07690 Major Facilitator Superfamily AEA00_06230 PF01208 Uroporphyrinogen decarboxylase (URO-D) AEA00_06240 PF01761 3-dehydroquinate synthase AEA00_06245 PF01202 Shikimate kinase AEA00_06250 PF01243 Pyridoxamine 5'-phosphate oxidase AEA00_06250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AEA00_06260 PF04012 PspA/IM30 family AEA00_06285 PF03738 Glutathionylspermidine synthase preATP-grasp AEA00_06290 PF07690 Major Facilitator Superfamily AEA00_06295 PF00376 MerR family regulatory protein AEA00_06295 PF09278 MerR, DNA binding AEA00_06355 PF01339 CheB methylesterase AEA00_06355 PF00072 Response regulator receiver domain AEA00_06370 PF00324 Amino acid permease AEA00_06375 PF00196 Bacterial regulatory proteins, luxR family AEA00_06380 PF00561 alpha/beta hydrolase fold AEA00_06385 PF00544 Pectate lyase AEA00_06390 PF00324 Amino acid permease AEA00_06395 PF01654 Cytochrome bd terminal oxidase subunit I AEA00_06400 PF02322 Cytochrome bd terminal oxidase subunit II AEA00_06410 PF00571 CBS domain AEA00_06410 PF01769 Divalent cation transporter AEA00_06410 PF03448 MgtE intracellular N domain AEA00_06415 PF02896 PEP-utilising enzyme, TIM barrel domain AEA00_06415 PF00391 PEP-utilising enzyme, mobile domain AEA00_06415 PF05524 PEP-utilising enzyme, N-terminal AEA00_06420 PF00381 PTS HPr component phosphorylation site AEA00_06430 PF03668 P-loop ATPase protein family AEA00_06435 PF02603 HPr Serine kinase N terminus AEA00_06435 PF07475 HPr Serine kinase C-terminal domain AEA00_06440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AEA00_06445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AEA00_06450 PF04552 Sigma-54, DNA binding domain AEA00_06450 PF04963 Sigma-54 factor, core binding domain AEA00_06450 PF00309 Sigma-54 factor, Activator interacting domain (AID) AEA00_06455 PF00005 ABC transporter AEA00_06475 PF01380 SIS domain AEA00_06475 PF00571 CBS domain AEA00_06480 PF01722 BolA-like protein AEA00_06485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AEA00_06505 PF00551 Formyl transferase AEA00_06515 PF02769 AIR synthase related protein, C-terminal domain AEA00_06515 PF00586 AIR synthase related protein, N-terminal domain AEA00_06525 PF01594 AI-2E family transporter AEA00_06530 PF00308 Bacterial dnaA protein AEA00_06535 PF00483 Nucleotidyl transferase AEA00_06540 PF01636 Phosphotransferase enzyme family AEA00_06550 PF07687 Peptidase dimerisation domain AEA00_06550 PF01546 Peptidase family M20/M25/M40 AEA00_06565 PF00667 FAD binding domain AEA00_06565 PF00258 Flavodoxin AEA00_06565 PF00175 Oxidoreductase NAD-binding domain AEA00_06570 PF02424 ApbE family AEA00_06595 PF18331 PKHD-type hydroxylase C-terminal domain AEA00_06595 PF13640 2OG-Fe(II) oxygenase superfamily AEA00_06600 PF00593 TonB dependent receptor AEA00_06600 PF07715 TonB-dependent Receptor Plug Domain AEA00_06605 PF00355 Rieske [2Fe-2S] domain AEA00_06615 PF00266 Aminotransferase class-V AEA00_06620 PF01458 Uncharacterized protein family (UPF0051) AEA00_06625 PF00005 ABC transporter AEA00_06630 PF01458 Uncharacterized protein family (UPF0051) AEA00_06645 PF01965 DJ-1/PfpI family AEA00_06675 PF14748 Pyrroline-5-carboxylate reductase dimerisation AEA00_06675 PF03807 NADP oxidoreductase coenzyme F420-dependent AEA00_06680 PF01168 Alanine racemase, N-terminal domain AEA00_06685 PF00437 Type II/IV secretion system protein AEA00_06690 PF00437 Type II/IV secretion system protein AEA00_06710 PF13673 Acetyltransferase (GNAT) domain AEA00_06710 PF13302 Acetyltransferase (GNAT) domain AEA00_06710 PF00958 GMP synthase C terminal domain AEA00_06710 PF00117 Glutamine amidotransferase class-I AEA00_06710 PF03352 Methyladenine glycosylase AEA00_06715 PF13687 Domain of unknown function (DUF4153) AEA00_06720 PF02622 Uncharacterized ACR, COG1678 AEA00_06725 PF03652 Holliday junction resolvase AEA00_06730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEA00_06730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEA00_06735 PF02566 OsmC-like protein AEA00_06745 PF02567 Phenazine biosynthesis-like protein AEA00_06750 PF02567 Phenazine biosynthesis-like protein AEA00_06755 PF00696 Amino acid kinase family AEA00_06755 PF01842 ACT domain AEA00_06770 PF08245 Mur ligase middle domain AEA00_06780 PF00348 Polyprenyl synthetase AEA00_06785 PF00436 Single-strand binding protein family AEA00_06795 PF12102 Domain of unknown function (DUF3578) AEA00_06795 PF07728 AAA domain (dynein-related subfamily) AEA00_06805 PF00563 EAL domain AEA00_06805 PF01590 GAF domain AEA00_06805 PF00990 Diguanylate cyclase, GGDEF domain AEA00_06805 PF00360 Phytochrome region AEA00_06810 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_06810 PF00107 Zinc-binding dehydrogenase AEA00_06815 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEA00_06815 PF01799 [2Fe-2S] binding domain AEA00_06815 PF00111 2Fe-2S iron-sulfur cluster binding domain AEA00_06820 PF00941 FAD binding domain in molybdopterin dehydrogenase AEA00_06820 PF03450 CO dehydrogenase flavoprotein C-terminal domain AEA00_06825 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AEA00_06825 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AEA00_06830 PF02625 XdhC and CoxI family AEA00_06830 PF13478 XdhC Rossmann domain AEA00_06835 PF12804 MobA-like NTP transferase domain AEA00_06865 PF04328 Selenoprotein, putative AEA00_06870 PF02554 Carbon starvation protein CstA AEA00_06870 PF13722 5TM C-terminal transporter carbon starvation CstA AEA00_06875 PF02678 Pirin AEA00_06875 PF05726 Pirin C-terminal cupin domain AEA00_06890 PF02678 Pirin AEA00_06890 PF05726 Pirin C-terminal cupin domain AEA00_06895 PF04493 Endonuclease V AEA00_06900 PF00300 Histidine phosphatase superfamily (branch 1) AEA00_06910 PF05649 Peptidase family M13 AEA00_06910 PF01431 Peptidase family M13 AEA00_06915 PF05598 Transposase domain (DUF772) AEA00_06915 PF01609 Transposase DDE domain AEA00_06920 PF13091 PLD-like domain AEA00_06925 PF01339 CheB methylesterase AEA00_06925 PF00072 Response regulator receiver domain AEA00_06930 PF01739 CheR methyltransferase, SAM binding domain AEA00_06930 PF03705 CheR methyltransferase, all-alpha domain AEA00_06935 PF13426 PAS domain AEA00_06935 PF00990 Diguanylate cyclase, GGDEF domain AEA00_06935 PF00563 EAL domain AEA00_06940 PF01584 CheW-like domain AEA00_06945 PF02203 Tar ligand binding domain homologue AEA00_06945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_06945 PF00672 HAMP domain AEA00_06950 PF09078 CheY binding AEA00_06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_06950 PF02895 Signal transducing histidine kinase, homodimeric domain AEA00_06950 PF01627 Hpt domain AEA00_06950 PF01584 CheW-like domain AEA00_06960 PF03461 TRCF domain AEA00_06960 PF02559 CarD-like/TRCF domain AEA00_06960 PF17757 UvrB interaction domain AEA00_06960 PF00270 DEAD/DEAH box helicase AEA00_06960 PF00271 Helicase conserved C-terminal domain AEA00_06970 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AEA00_06975 PF00486 Transcriptional regulatory protein, C terminal AEA00_06975 PF00072 Response regulator receiver domain AEA00_06980 PF00672 HAMP domain AEA00_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_06980 PF00512 His Kinase A (phospho-acceptor) domain AEA00_06990 PF06123 Inner membrane protein CreD AEA00_07020 PF00749 tRNA synthetases class I (E and Q), catalytic domain AEA00_07025 PF01475 Ferric uptake regulator family AEA00_07035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_07035 PF00529 HlyD membrane-fusion protein of T1SS AEA00_07040 PF00873 AcrB/AcrD/AcrF family AEA00_07045 PF02321 Outer membrane efflux protein AEA00_07050 PF16859 Tetracyclin repressor-like, C-terminal domain AEA00_07050 PF00440 Bacterial regulatory proteins, tetR family AEA00_07055 PF00248 Aldo/keto reductase family AEA00_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_07060 PF03466 LysR substrate binding domain AEA00_07070 PF06719 AraC-type transcriptional regulator N-terminus AEA00_07070 PF12833 Helix-turn-helix domain AEA00_07085 PF01483 Proprotein convertase P-domain AEA00_07085 PF00082 Subtilase family AEA00_07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_07090 PF03466 LysR substrate binding domain AEA00_07095 PF07690 Major Facilitator Superfamily AEA00_07125 PF01568 Molydopterin dinucleotide binding domain AEA00_07125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AEA00_07125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEA00_07125 PF00384 Molybdopterin oxidoreductase AEA00_07125 PF12838 4Fe-4S dicluster domain AEA00_07135 PF01654 Cytochrome bd terminal oxidase subunit I AEA00_07140 PF02322 Cytochrome bd terminal oxidase subunit II AEA00_07155 PF00593 TonB dependent receptor AEA00_07155 PF07715 TonB-dependent Receptor Plug Domain AEA00_07170 PF00654 Voltage gated chloride channel AEA00_07185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AEA00_07185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AEA00_07190 PF00730 HhH-GPD superfamily base excision DNA repair protein AEA00_07190 PF06029 AlkA N-terminal domain AEA00_07215 PF01494 FAD binding domain AEA00_07240 PF03880 DbpA RNA binding domain AEA00_07240 PF00271 Helicase conserved C-terminal domain AEA00_07240 PF00270 DEAD/DEAH box helicase AEA00_07245 PF08448 PAS fold AEA00_07245 PF00990 Diguanylate cyclase, GGDEF domain AEA00_07245 PF00563 EAL domain AEA00_07250 PF01479 S4 domain AEA00_07250 PF00849 RNA pseudouridylate synthase AEA00_07270 PF03737 Aldolase/RraA AEA00_07275 PF00144 Beta-lactamase AEA00_07285 PF00999 Sodium/hydrogen exchanger family AEA00_07290 PF00005 ABC transporter AEA00_07290 PF00664 ABC transporter transmembrane region AEA00_07315 PF01022 Bacterial regulatory protein, arsR family AEA00_07320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_07320 PF03466 LysR substrate binding domain AEA00_07335 PF04070 Domain of unknown function (DUF378) AEA00_07345 PF00085 Thioredoxin AEA00_07355 PF08264 Anticodon-binding domain of tRNA AEA00_07355 PF00133 tRNA synthetases class I (I, L, M and V) AEA00_07355 PF13603 Leucyl-tRNA synthetase, Domain 2 AEA00_07370 PF01467 Cytidylyltransferase-like AEA00_07385 PF02590 Predicted SPOUT methyltransferase AEA00_07395 PF04402 Protein of unknown function (DUF541) AEA00_07400 PF02545 Maf-like protein AEA00_07405 PF10150 Ribonuclease E/G family AEA00_07405 PF00575 S1 RNA binding domain AEA00_07410 PF13116 Protein of unknown function AEA00_07410 PF13502 AsmA-like C-terminal region AEA00_07420 PF01523 Putative modulator of DNA gyrase AEA00_07425 PF04751 Protein of unknown function (DUF615) AEA00_07430 PF01523 Putative modulator of DNA gyrase AEA00_07445 PF00348 Polyprenyl synthetase AEA00_07450 PF02609 Exonuclease VII small subunit AEA00_07455 PF01171 PP-loop family AEA00_07455 PF11734 TilS substrate C-terminal domain AEA00_07455 PF09179 TilS substrate binding domain AEA00_07460 PF00245 Alkaline phosphatase AEA00_07465 PF00375 Sodium:dicarboxylate symporter family AEA00_07485 PF05598 Transposase domain (DUF772) AEA00_07495 PF00512 His Kinase A (phospho-acceptor) domain AEA00_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_07500 PF00989 PAS fold AEA00_07500 PF00158 Sigma-54 interaction domain AEA00_07500 PF02954 Bacterial regulatory protein, Fis family AEA00_07505 PF02954 Bacterial regulatory protein, Fis family AEA00_07505 PF00072 Response regulator receiver domain AEA00_07505 PF00158 Sigma-54 interaction domain AEA00_07535 PF00877 NlpC/P60 family AEA00_07540 PF00877 NlpC/P60 family AEA00_07545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEA00_07550 PF04235 Protein of unknown function (DUF418) AEA00_07555 PF01266 FAD dependent oxidoreductase AEA00_07560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_07560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AEA00_07580 PF01431 Peptidase family M13 AEA00_07580 PF05649 Peptidase family M13 AEA00_07585 PF01431 Peptidase family M13 AEA00_07585 PF05649 Peptidase family M13 AEA00_07595 PF00593 TonB dependent receptor AEA00_07595 PF07715 TonB-dependent Receptor Plug Domain AEA00_07600 PF10609 NUBPL iron-transfer P-loop NTPase AEA00_07605 PF00692 dUTPase AEA00_07625 PF01738 Dienelactone hydrolase family AEA00_07635 PF04055 Radical SAM superfamily AEA00_07635 PF18693 TRAM domain AEA00_07635 PF00919 Uncharacterized protein family UPF0004 AEA00_07640 PF01272 Transcription elongation factor, GreA/GreB, C-term AEA00_07640 PF03449 Transcription elongation factor, N-terminal AEA00_07655 PF00293 NUDIX domain AEA00_07660 PF05872 Bacterial protein of unknown function (DUF853) AEA00_07675 PF02666 Phosphatidylserine decarboxylase AEA00_07680 PF02630 SCO1/SenC AEA00_07685 PF05175 Methyltransferase small domain AEA00_07695 PF01264 Chorismate synthase AEA00_07700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEA00_07700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEA00_07705 PF02774 Semialdehyde dehydrogenase, dimerisation domain AEA00_07705 PF01118 Semialdehyde dehydrogenase, NAD binding domain AEA00_07720 PF01416 tRNA pseudouridine synthase AEA00_07725 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AEA00_07730 PF03466 LysR substrate binding domain AEA00_07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_07735 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_07745 PF00290 Tryptophan synthase alpha chain AEA00_07750 PF17848 Acetyl-coA carboxylase zinc finger domain AEA00_07750 PF01039 Carboxyl transferase domain AEA00_07755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AEA00_07755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AEA00_07755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AEA00_07755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AEA00_07770 PF00990 Diguanylate cyclase, GGDEF domain AEA00_07770 PF03707 Bacterial signalling protein N terminal repeat AEA00_07770 PF00563 EAL domain AEA00_07780 PF01152 Bacterial-like globin AEA00_07790 PF00106 short chain dehydrogenase AEA00_07795 PF00121 Triosephosphate isomerase AEA00_07810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AEA00_07815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AEA00_07820 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AEA00_07825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AEA00_07835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AEA00_07835 PF10531 SLBB domain AEA00_07835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AEA00_07840 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AEA00_07840 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AEA00_07840 PF00384 Molybdopterin oxidoreductase AEA00_07845 PF00146 NADH dehydrogenase AEA00_07850 PF12838 4Fe-4S dicluster domain AEA00_07855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AEA00_07860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AEA00_07865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AEA00_07865 PF00361 Proton-conducting membrane transporter AEA00_07870 PF00361 Proton-conducting membrane transporter AEA00_07870 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AEA00_07875 PF00361 Proton-conducting membrane transporter AEA00_07885 PF02576 RimP N-terminal domain AEA00_07885 PF17384 RimP C-terminal SH3 domain AEA00_07890 PF08529 NusA N-terminal domain AEA00_07890 PF00575 S1 RNA binding domain AEA00_07890 PF13184 NusA-like KH domain AEA00_07895 PF11987 Translation-initiation factor 2 AEA00_07895 PF04760 Translation initiation factor IF-2, N-terminal region AEA00_07895 PF00009 Elongation factor Tu GTP binding domain AEA00_07895 PF08364 Bacterial translation initiation factor IF-2 associated region AEA00_07900 PF02033 Ribosome-binding factor A AEA00_07905 PF01509 TruB family pseudouridylate synthase (N terminal domain) AEA00_07905 PF16198 tRNA pseudouridylate synthase B C-terminal domain AEA00_07905 PF09157 Pseudouridine synthase II TruB, C-terminal AEA00_07910 PF00312 Ribosomal protein S15 AEA00_07915 PF03725 3' exoribonuclease family, domain 2 AEA00_07915 PF01138 3' exoribonuclease family, domain 1 AEA00_07915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AEA00_07915 PF00013 KH domain AEA00_07915 PF00575 S1 RNA binding domain AEA00_07925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AEA00_07925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AEA00_07935 PF00731 AIR carboxylase AEA00_07940 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AEA00_07940 PF02222 ATP-grasp domain AEA00_07945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AEA00_07945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AEA00_07950 PF00462 Glutaredoxin AEA00_07960 PF01914 MarC family integral membrane protein AEA00_07965 PF00593 TonB dependent receptor AEA00_07970 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AEA00_07970 PF03641 Possible lysine decarboxylase AEA00_07970 PF11892 Domain of unknown function (DUF3412) AEA00_07975 PF07963 Prokaryotic N-terminal methylation motif AEA00_08005 PF00114 Pilin (bacterial filament) AEA00_08005 PF07963 Prokaryotic N-terminal methylation motif AEA00_08010 PF17757 UvrB interaction domain AEA00_08010 PF12344 Ultra-violet resistance protein B AEA00_08010 PF02151 UvrB/uvrC motif AEA00_08010 PF00271 Helicase conserved C-terminal domain AEA00_08010 PF04851 Type III restriction enzyme, res subunit AEA00_08025 PF02534 Type IV secretory system Conjugative DNA transfer AEA00_08045 PF03743 Bacterial conjugation TrbI-like protein AEA00_08050 PF00437 Type II/IV secretion system protein AEA00_08055 PF01464 Transglycosylase SLT domain AEA00_08065 PF05101 Type IV secretory pathway, VirB3-like protein AEA00_08070 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AEA00_08080 PF05598 Transposase domain (DUF772) AEA00_08085 PF00128 Alpha amylase, catalytic domain AEA00_08090 PF01609 Transposase DDE domain AEA00_08090 PF05598 Transposase domain (DUF772) AEA00_08105 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AEA00_08105 PF14508 Glycosyl-hydrolase 97 N-terminal AEA00_08105 PF10566 Glycoside hydrolase 97 AEA00_08115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AEA00_08120 PF00128 Alpha amylase, catalytic domain AEA00_08120 PF00686 Starch binding domain AEA00_08125 PF00356 Bacterial regulatory proteins, lacI family AEA00_08130 PF02824 TGS domain AEA00_08130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AEA00_08130 PF03129 Anticodon binding domain AEA00_08130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEA00_08135 PF05198 Translation initiation factor IF-3, N-terminal domain AEA00_08135 PF00707 Translation initiation factor IF-3, C-terminal domain AEA00_08140 PF01632 Ribosomal protein L35 AEA00_08145 PF00453 Ribosomal protein L20 AEA00_08150 PF01409 tRNA synthetases class II core domain (F) AEA00_08150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AEA00_08155 PF01588 Putative tRNA binding domain AEA00_08155 PF03483 B3/4 domain AEA00_08155 PF03484 tRNA synthetase B5 domain AEA00_08155 PF03147 Ferredoxin-fold anticodon binding domain AEA00_08155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AEA00_08160 PF00216 Bacterial DNA-binding protein AEA00_08165 PF13411 MerR HTH family regulatory protein AEA00_08185 PF02397 Bacterial sugar transferase AEA00_08205 PF00534 Glycosyl transferases group 1 AEA00_08205 PF13439 Glycosyltransferase Family 4 AEA00_08215 PF01943 Polysaccharide biosynthesis protein AEA00_08230 PF03808 Glycosyl transferase WecB/TagA/CpsF family AEA00_08245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AEA00_08245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AEA00_08250 PF00753 Metallo-beta-lactamase superfamily AEA00_08250 PF16123 Hydroxyacylglutathione hydrolase C-terminus AEA00_08255 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AEA00_08275 PF02780 Transketolase, C-terminal domain AEA00_08275 PF02779 Transketolase, pyrimidine binding domain AEA00_08275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AEA00_08285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_08285 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_08285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_08285 PF12806 Acetyl-CoA dehydrogenase C-terminal like AEA00_08320 PF00072 Response regulator receiver domain AEA00_08320 PF00512 His Kinase A (phospho-acceptor) domain AEA00_08320 PF08448 PAS fold AEA00_08320 PF13188 PAS domain AEA00_08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_08340 PF00893 Small Multidrug Resistance protein AEA00_08345 PF13426 PAS domain AEA00_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_08345 PF00072 Response regulator receiver domain AEA00_08355 PF04362 Bacterial Fe(2+) trafficking AEA00_08360 PF00633 Helix-hairpin-helix motif AEA00_08360 PF14815 NUDIX domain AEA00_08360 PF00730 HhH-GPD superfamily base excision DNA repair protein AEA00_08365 PF00448 SRP54-type protein, GTPase domain AEA00_08365 PF02881 SRP54-type protein, helical bundle domain AEA00_08375 PF05544 Proline racemase AEA00_08380 PF01266 FAD dependent oxidoreductase AEA00_08390 PF04324 BFD-like [2Fe-2S] binding domain AEA00_08390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_08395 PF00701 Dihydrodipicolinate synthetase family AEA00_08400 PF00171 Aldehyde dehydrogenase family AEA00_08405 PF00557 Metallopeptidase family M24 AEA00_08405 PF01321 Creatinase/Prolidase N-terminal domain AEA00_08420 PF13520 Amino acid permease AEA00_08450 PF07715 TonB-dependent Receptor Plug Domain AEA00_08450 PF00593 TonB dependent receptor AEA00_08455 PF07532 Bacterial Ig-like domain (group 4) AEA00_08460 PF04616 Glycosyl hydrolases family 43 AEA00_08465 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AEA00_08465 PF00326 Prolyl oligopeptidase family AEA00_08475 PF00593 TonB dependent receptor AEA00_08475 PF07715 TonB-dependent Receptor Plug Domain AEA00_08490 PF00183 Hsp90 protein AEA00_08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_08500 PF01467 Cytidylyltransferase-like AEA00_08515 PF00037 4Fe-4S binding domain AEA00_08525 PF02927 Cellulase N-terminal ig-like domain AEA00_08525 PF00759 Glycosyl hydrolase family 9 AEA00_08555 PF00202 Aminotransferase class-III AEA00_08565 PF02547 Queuosine biosynthesis protein AEA00_08570 PF01702 Queuine tRNA-ribosyltransferase AEA00_08575 PF02699 Preprotein translocase subunit AEA00_08580 PF13721 SecD export protein N-terminal TM region AEA00_08580 PF07549 SecD/SecF GG Motif AEA00_08580 PF02355 Protein export membrane protein AEA00_08585 PF07549 SecD/SecF GG Motif AEA00_08585 PF02355 Protein export membrane protein AEA00_08605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AEA00_08610 PF00294 pfkB family carbohydrate kinase AEA00_08615 PF00391 PEP-utilising enzyme, mobile domain AEA00_08615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AEA00_08615 PF00381 PTS HPr component phosphorylation site AEA00_08615 PF02896 PEP-utilising enzyme, TIM barrel domain AEA00_08615 PF05524 PEP-utilising enzyme, N-terminal AEA00_08620 PF00356 Bacterial regulatory proteins, lacI family AEA00_08625 PF00873 AcrB/AcrD/AcrF family AEA00_08630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_08630 PF00529 HlyD membrane-fusion protein of T1SS AEA00_08640 PF05088 Bacterial NAD-glutamate dehydrogenase AEA00_08645 PF12833 Helix-turn-helix domain AEA00_08650 PF00857 Isochorismatase family AEA00_08655 PF07690 Major Facilitator Superfamily AEA00_08660 PF00072 Response regulator receiver domain AEA00_08665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AEA00_08665 PF00072 Response regulator receiver domain AEA00_08665 PF01627 Hpt domain AEA00_08665 PF00512 His Kinase A (phospho-acceptor) domain AEA00_08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_08665 PF00672 HAMP domain AEA00_08670 PF04286 Protein of unknown function (DUF445) AEA00_08680 PF00202 Aminotransferase class-III AEA00_08685 PF07690 Major Facilitator Superfamily AEA00_08690 PF02634 FdhD/NarQ family AEA00_08695 PF00384 Molybdopterin oxidoreductase AEA00_08705 PF00083 Sugar (and other) transporter AEA00_08705 PF07690 Major Facilitator Superfamily AEA00_08710 PF01814 Hemerythrin HHE cation binding domain AEA00_08715 PF00990 Diguanylate cyclase, GGDEF domain AEA00_08715 PF00072 Response regulator receiver domain AEA00_08720 PF01266 FAD dependent oxidoreductase AEA00_08725 PF00120 Glutamine synthetase, catalytic domain AEA00_08730 PF07722 Peptidase C26 AEA00_08735 PF00120 Glutamine synthetase, catalytic domain AEA00_08740 PF00202 Aminotransferase class-III AEA00_08745 PF13416 Bacterial extracellular solute-binding protein AEA00_08750 PF13533 Biotin-lipoyl like AEA00_08755 PF07690 Major Facilitator Superfamily AEA00_08760 PF02321 Outer membrane efflux protein AEA00_08765 PF08402 TOBE domain AEA00_08765 PF00005 ABC transporter AEA00_08770 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_08775 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_08785 PF00171 Aldehyde dehydrogenase family AEA00_08800 PF00571 CBS domain AEA00_08800 PF03471 Transporter associated domain AEA00_08810 PF02130 Uncharacterized protein family UPF0054 AEA00_08820 PF02562 PhoH-like protein AEA00_08825 PF04055 Radical SAM superfamily AEA00_08825 PF00919 Uncharacterized protein family UPF0004 AEA00_08825 PF01938 TRAM domain AEA00_08830 PF02798 Glutathione S-transferase, N-terminal domain AEA00_08830 PF14497 Glutathione S-transferase, C-terminal domain AEA00_08840 PF01464 Transglycosylase SLT domain AEA00_08845 PF00355 Rieske [2Fe-2S] domain AEA00_08845 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AEA00_08850 PF00032 Cytochrome b(C-terminal)/b6/petD AEA00_08850 PF00033 Cytochrome b/b6/petB AEA00_08855 PF02167 Cytochrome C1 family AEA00_08860 PF02798 Glutathione S-transferase, N-terminal domain AEA00_08860 PF00043 Glutathione S-transferase, C-terminal domain AEA00_08865 PF04386 Stringent starvation protein B AEA00_08880 PF00271 Helicase conserved C-terminal domain AEA00_08880 PF08494 DEAD/H associated AEA00_08880 PF00270 DEAD/DEAH box helicase AEA00_08885 PF02245 Methylpurine-DNA glycosylase (MPG) AEA00_08890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_08890 PF00672 HAMP domain AEA00_08890 PF02203 Tar ligand binding domain homologue AEA00_08895 PF01584 CheW-like domain AEA00_08935 PF01068 ATP dependent DNA ligase domain AEA00_08935 PF13298 DNA polymerase Ligase (LigD) AEA00_08935 PF04679 ATP dependent DNA ligase C terminal region AEA00_08940 PF00570 HRDC domain AEA00_08940 PF01612 3'-5' exonuclease AEA00_08945 PF03781 Sulfatase-modifying factor enzyme 1 AEA00_08955 PF13742 OB-fold nucleic acid binding domain AEA00_08955 PF02601 Exonuclease VII, large subunit AEA00_08960 PF08331 Domain of unknown function (DUF1730) AEA00_08965 PF03853 YjeF-related protein N-terminus AEA00_08965 PF01256 Carbohydrate kinase AEA00_08975 PF11741 AMIN domain AEA00_08975 PF01520 N-acetylmuramoyl-L-alanine amidase AEA00_08980 PF08676 MutL C terminal dimerisation domain AEA00_08980 PF01119 DNA mismatch repair protein, C-terminal domain AEA00_08995 PF07879 PHB/PHA accumulation regulator DNA-binding domain AEA00_08995 PF05233 PHB accumulation regulatory domain AEA00_09000 PF00106 short chain dehydrogenase AEA00_09005 PF00749 tRNA synthetases class I (E and Q), catalytic domain AEA00_09010 PF01435 Peptidase family M48 AEA00_09015 PF03707 Bacterial signalling protein N terminal repeat AEA00_09015 PF00990 Diguanylate cyclase, GGDEF domain AEA00_09015 PF00563 EAL domain AEA00_09025 PF07152 YaeQ protein AEA00_09030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AEA00_09035 PF00313 'Cold-shock' DNA-binding domain AEA00_09045 PF07859 alpha/beta hydrolase fold AEA00_09050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AEA00_09055 PF00156 Phosphoribosyl transferase domain AEA00_09060 PF00271 Helicase conserved C-terminal domain AEA00_09060 PF00270 DEAD/DEAH box helicase AEA00_09060 PF03880 DbpA RNA binding domain AEA00_09075 PF00545 ribonuclease AEA00_09080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AEA00_09080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AEA00_09085 PF00459 Inositol monophosphatase family AEA00_09090 PF00588 SpoU rRNA Methylase family AEA00_09100 PF00563 EAL domain AEA00_09100 PF00990 Diguanylate cyclase, GGDEF domain AEA00_09100 PF03707 Bacterial signalling protein N terminal repeat AEA00_09100 PF13188 PAS domain AEA00_09105 PF04055 Radical SAM superfamily AEA00_09110 PF01132 Elongation factor P (EF-P) OB domain AEA00_09110 PF08207 Elongation factor P (EF-P) KOW-like domain AEA00_09110 PF09285 Elongation factor P, C-terminal AEA00_09120 PF01979 Amidohydrolase family AEA00_09130 PF13419 Haloacid dehalogenase-like hydrolase AEA00_09140 PF00295 Glycosyl hydrolases family 28 AEA00_09145 PF01095 Pectinesterase AEA00_09155 PF00753 Metallo-beta-lactamase superfamily AEA00_09165 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AEA00_09170 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AEA00_09180 PF08460 Bacterial SH3 domain AEA00_09180 PF01551 Peptidase family M23 AEA00_09185 PF01979 Amidohydrolase family AEA00_09190 PF01809 Putative membrane protein insertion efficiency factor AEA00_09200 PF01258 Prokaryotic dksA/traR C4-type zinc finger AEA00_09215 PF07690 Major Facilitator Superfamily AEA00_09220 PF02657 Fe-S metabolism associated domain AEA00_09225 PF01406 tRNA synthetases class I (C) catalytic domain AEA00_09225 PF09190 DALR domain AEA00_09235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEA00_09235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEA00_09245 PF00764 Arginosuccinate synthase AEA00_09255 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AEA00_09255 PF00696 Amino acid kinase family AEA00_09265 PF01118 Semialdehyde dehydrogenase, NAD binding domain AEA00_09270 PF00206 Lyase AEA00_09285 PF01472 PUA domain AEA00_09285 PF00696 Amino acid kinase family AEA00_09290 PF00171 Aldehyde dehydrogenase family AEA00_09295 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AEA00_09295 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AEA00_09315 PF02322 Cytochrome bd terminal oxidase subunit II AEA00_09320 PF01654 Cytochrome bd terminal oxidase subunit I AEA00_09325 PF00664 ABC transporter transmembrane region AEA00_09325 PF00005 ABC transporter AEA00_09330 PF00664 ABC transporter transmembrane region AEA00_09330 PF00005 ABC transporter AEA00_09340 PF00561 alpha/beta hydrolase fold AEA00_09350 PF03918 Cytochrome C biogenesis protein AEA00_09355 PF08534 Redoxin AEA00_09360 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AEA00_09360 PF01578 Cytochrome C assembly protein AEA00_09365 PF03100 CcmE AEA00_09375 PF01578 Cytochrome C assembly protein AEA00_09380 PF03379 CcmB protein AEA00_09385 PF00005 ABC transporter AEA00_09390 PF00155 Aminotransferase class I and II AEA00_09395 PF00795 Carbon-nitrogen hydrolase AEA00_09410 PF01479 S4 domain AEA00_09410 PF00849 RNA pseudouridylate synthase AEA00_09415 PF04079 Segregation and condensation complex subunit ScpB AEA00_09420 PF02616 Segregation and condensation protein ScpA AEA00_09425 PF03795 YCII-related domain AEA00_09435 PF00356 Bacterial regulatory proteins, lacI family AEA00_09450 PF13416 Bacterial extracellular solute-binding protein AEA00_09455 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_09460 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_09485 PF00795 Carbon-nitrogen hydrolase AEA00_09490 PF04371 Porphyromonas-type peptidyl-arginine deiminase AEA00_09500 PF00444 Ribosomal protein L36 AEA00_09505 PF02224 Cytidylate kinase AEA00_09510 PF00575 S1 RNA binding domain AEA00_09515 PF00216 Bacterial DNA-binding protein AEA00_09525 PF18073 Rubredoxin metal binding domain AEA00_09530 PF00953 Glycosyl transferase family 4 AEA00_09535 PF02719 Polysaccharide biosynthesis protein AEA00_09540 PF00483 Nucleotidyl transferase AEA00_09545 PF02254 TrkA-N domain AEA00_09545 PF00999 Sodium/hydrogen exchanger family AEA00_09555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AEA00_09555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AEA00_09560 PF00478 IMP dehydrogenase / GMP reductase domain AEA00_09560 PF00571 CBS domain AEA00_09570 PF00958 GMP synthase C terminal domain AEA00_09570 PF00117 Glutamine amidotransferase class-I AEA00_09570 PF02540 NAD synthase AEA00_09585 PF00196 Bacterial regulatory proteins, luxR family AEA00_09585 PF00072 Response regulator receiver domain AEA00_09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_09590 PF13492 GAF domain AEA00_09590 PF07730 Histidine kinase AEA00_09590 PF13185 GAF domain AEA00_09600 PF00857 Isochorismatase family AEA00_09610 PF07969 Amidohydrolase family AEA00_09615 PF05977 Transmembrane secretion effector AEA00_09625 PF00561 alpha/beta hydrolase fold AEA00_09630 PF01566 Natural resistance-associated macrophage protein AEA00_09635 PF01325 Iron dependent repressor, N-terminal DNA binding domain AEA00_09635 PF02742 Iron dependent repressor, metal binding and dimerisation domain AEA00_09640 PF14437 MafB19-like deaminase AEA00_09645 PF00929 Exonuclease AEA00_09650 PF00924 Mechanosensitive ion channel AEA00_09650 PF05552 Conserved TM helix AEA00_09655 PF00391 PEP-utilising enzyme, mobile domain AEA00_09655 PF02896 PEP-utilising enzyme, TIM barrel domain AEA00_09655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AEA00_09660 PF03618 Kinase/pyrophosphorylase AEA00_09680 PF01066 CDP-alcohol phosphatidyltransferase AEA00_09690 PF00561 alpha/beta hydrolase fold AEA00_09705 PF00355 Rieske [2Fe-2S] domain AEA00_09705 PF01266 FAD dependent oxidoreductase AEA00_09715 PF09371 Tex-like protein N-terminal domain AEA00_09715 PF00575 S1 RNA binding domain AEA00_09715 PF17674 HHH domain AEA00_09715 PF16921 Tex protein YqgF-like domain AEA00_09720 PF00563 EAL domain AEA00_09720 PF08447 PAS fold AEA00_09720 PF00990 Diguanylate cyclase, GGDEF domain AEA00_09720 PF08448 PAS fold AEA00_09760 PF00034 Cytochrome c AEA00_09770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_09775 PF00873 AcrB/AcrD/AcrF family AEA00_09780 PF00873 AcrB/AcrD/AcrF family AEA00_09785 PF01081 KDPG and KHG aldolase AEA00_09790 PF00920 Dehydratase family AEA00_09795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AEA00_09800 PF02685 Glucokinase AEA00_09805 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AEA00_09805 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AEA00_09810 PF17912 MalK OB fold domain AEA00_09810 PF00005 ABC transporter AEA00_09815 PF01571 Aminomethyltransferase folate-binding domain AEA00_09820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AEA00_09825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AEA00_09830 PF00890 FAD binding domain AEA00_09830 PF02910 Fumarate reductase flavoprotein C-term AEA00_09840 PF13085 2Fe-2S iron-sulfur cluster binding domain AEA00_09845 PF03937 Flavinator of succinate dehydrogenase AEA00_09855 PF12704 MacB-like periplasmic core domain AEA00_09855 PF02687 FtsX-like permease family AEA00_09860 PF00005 ABC transporter AEA00_09870 PF03772 Competence protein AEA00_09870 PF00753 Metallo-beta-lactamase superfamily AEA00_09875 PF01618 MotA/TolQ/ExbB proton channel family AEA00_09880 PF02472 Biopolymer transport protein ExbD/TolR AEA00_09885 PF00005 ABC transporter AEA00_09885 PF00664 ABC transporter transmembrane region AEA00_09890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AEA00_09895 PF02348 Cytidylyltransferase AEA00_09900 PF01451 Low molecular weight phosphotyrosine protein phosphatase AEA00_09910 PF01541 GIY-YIG catalytic domain AEA00_09910 PF02151 UvrB/uvrC motif AEA00_09910 PF08459 UvrC Helix-hairpin-helix N-terminal AEA00_09915 PF01066 CDP-alcohol phosphatidyltransferase AEA00_09940 PF01527 Transposase AEA00_09945 PF13276 HTH-like domain AEA00_09945 PF13683 Integrase core domain AEA00_09950 PF01609 Transposase DDE domain AEA00_09950 PF05598 Transposase domain (DUF772) AEA00_09955 PF05598 Transposase domain (DUF772) AEA00_09960 PF01527 Transposase AEA00_09965 PF13276 HTH-like domain AEA00_09965 PF13683 Integrase core domain AEA00_09970 PF05598 Transposase domain (DUF772) AEA00_09970 PF01609 Transposase DDE domain AEA00_10005 PF06969 HemN C-terminal domain AEA00_10005 PF04055 Radical SAM superfamily AEA00_10015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AEA00_10015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AEA00_10015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AEA00_10020 PF01593 Flavin containing amine oxidoreductase AEA00_10025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEA00_10040 PF00196 Bacterial regulatory proteins, luxR family AEA00_10040 PF00072 Response regulator receiver domain AEA00_10050 PF10150 Ribonuclease E/G family AEA00_10050 PF00575 S1 RNA binding domain AEA00_10050 PF12111 Polyribonucleotide phosphorylase C terminal AEA00_10055 PF00849 RNA pseudouridylate synthase AEA00_10055 PF01479 S4 domain AEA00_10060 PF02535 ZIP Zinc transporter AEA00_10070 PF01329 Pterin 4 alpha carbinolamine dehydratase AEA00_10075 PF01106 NifU-like domain AEA00_10095 PF02303 Helix-destabilising protein AEA00_10100 PF17091 Inovirus G7P protein AEA00_10155 PF10091 Putative glucoamylase AEA00_10155 PF06165 Glycosyltransferase family 36 AEA00_10155 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AEA00_10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10160 PF08448 PAS fold AEA00_10160 PF00072 Response regulator receiver domain AEA00_10160 PF00512 His Kinase A (phospho-acceptor) domain AEA00_10160 PF13188 PAS domain AEA00_10165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10165 PF00072 Response regulator receiver domain AEA00_10165 PF13426 PAS domain AEA00_10195 PF00672 HAMP domain AEA00_10195 PF02203 Tar ligand binding domain homologue AEA00_10195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_10205 PF09335 SNARE associated Golgi protein AEA00_10230 PF01638 HxlR-like helix-turn-helix AEA00_10245 PF02630 SCO1/SenC AEA00_10260 PF05649 Peptidase family M13 AEA00_10260 PF01431 Peptidase family M13 AEA00_10270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AEA00_10275 PF07995 Glucose / Sorbosone dehydrogenase AEA00_10285 PF08446 PAS fold AEA00_10285 PF00512 His Kinase A (phospho-acceptor) domain AEA00_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10285 PF01590 GAF domain AEA00_10285 PF00360 Phytochrome region AEA00_10315 PF00082 Subtilase family AEA00_10315 PF03797 Autotransporter beta-domain AEA00_10320 PF12951 Passenger-associated-transport-repeat AEA00_10320 PF12951 Passenger-associated-transport-repeat AEA00_10325 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10325 PF00563 EAL domain AEA00_10325 PF08448 PAS fold AEA00_10325 PF08447 PAS fold AEA00_10335 PF00072 Response regulator receiver domain AEA00_10335 PF01339 CheB methylesterase AEA00_10340 PF05974 Domain of unknown function (DUF892) AEA00_10355 PF01266 FAD dependent oxidoreductase AEA00_10365 PF00483 Nucleotidyl transferase AEA00_10375 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AEA00_10390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AEA00_10395 PF04324 BFD-like [2Fe-2S] binding domain AEA00_10395 PF00384 Molybdopterin oxidoreductase AEA00_10395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEA00_10395 PF01568 Molydopterin dinucleotide binding domain AEA00_10400 PF00355 Rieske [2Fe-2S] domain AEA00_10400 PF11723 Homotrimeric ring hydroxylase AEA00_10405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AEA00_10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_10405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AEA00_10405 PF18267 Rubredoxin NAD+ reductase C-terminal domain AEA00_10405 PF04324 BFD-like [2Fe-2S] binding domain AEA00_10410 PF07690 Major Facilitator Superfamily AEA00_10420 PF03861 ANTAR domain AEA00_10420 PF00072 Response regulator receiver domain AEA00_10425 PF14824 Sirohaem biosynthesis protein central AEA00_10425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AEA00_10425 PF10414 Sirohaem synthase dimerisation region AEA00_10435 PF12804 MobA-like NTP transferase domain AEA00_10440 PF00994 Probable molybdopterin binding domain AEA00_10440 PF03454 MoeA C-terminal region (domain IV) AEA00_10440 PF03453 MoeA N-terminal region (domain I and II) AEA00_10450 PF03372 Endonuclease/Exonuclease/phosphatase family AEA00_10460 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_10460 PF00107 Zinc-binding dehydrogenase AEA00_10460 PF13823 Alcohol dehydrogenase GroES-associated AEA00_10475 PF00067 Cytochrome P450 AEA00_10480 PF00106 short chain dehydrogenase AEA00_10495 PF00899 ThiF family AEA00_10500 PF03453 MoeA N-terminal region (domain I and II) AEA00_10500 PF03454 MoeA C-terminal region (domain IV) AEA00_10500 PF00994 Probable molybdopterin binding domain AEA00_10505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AEA00_10505 PF01926 50S ribosome-binding GTPase AEA00_10510 PF13360 PQQ-like domain AEA00_10510 PF01011 PQQ enzyme repeat AEA00_10520 PF13464 Domain of unknown function (DUF4115) AEA00_10530 PF04055 Radical SAM superfamily AEA00_10535 PF00334 Nucleoside diphosphate kinase AEA00_10545 PF00378 Enoyl-CoA hydratase/isomerase AEA00_10545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AEA00_10545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AEA00_10550 PF02803 Thiolase, C-terminal domain AEA00_10550 PF00108 Thiolase, N-terminal domain AEA00_10555 PF00654 Voltage gated chloride channel AEA00_10560 PF12002 MgsA AAA+ ATPase C terminal AEA00_10560 PF16193 AAA C-terminal domain AEA00_10560 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_10570 PF03548 Outer membrane lipoprotein carrier protein LolA AEA00_10580 PF17854 FtsK alpha domain AEA00_10580 PF09397 Ftsk gamma domain AEA00_10580 PF01580 FtsK/SpoIIIE family AEA00_10580 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AEA00_10585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_10595 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AEA00_10600 PF01176 Translation initiation factor 1A / IF-1 AEA00_10605 PF07724 AAA domain (Cdc48 subfamily) AEA00_10605 PF10431 C-terminal, D2-small domain, of ClpB protein AEA00_10605 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_10605 PF17871 AAA lid domain AEA00_10605 PF02861 Clp amino terminal domain, pathogenicity island component AEA00_10610 PF02617 ATP-dependent Clp protease adaptor protein ClpS AEA00_10615 PF00293 NUDIX domain AEA00_10625 PF04356 Protein of unknown function (DUF489) AEA00_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_10630 PF00672 HAMP domain AEA00_10630 PF12729 Four helix bundle sensory module for signal transduction AEA00_10645 PF03707 Bacterial signalling protein N terminal repeat AEA00_10645 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10645 PF00563 EAL domain AEA00_10650 PF07730 Histidine kinase AEA00_10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10655 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10655 PF00563 EAL domain AEA00_10655 PF03707 Bacterial signalling protein N terminal repeat AEA00_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10660 PF00512 His Kinase A (phospho-acceptor) domain AEA00_10680 PF00072 Response regulator receiver domain AEA00_10680 PF01584 CheW-like domain AEA00_10690 PF00460 Flagella basal body rod protein AEA00_10690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AEA00_10695 PF03963 Flagellar hook capping protein - N-terminal region AEA00_10700 PF07559 Flagellar basal body protein FlaE AEA00_10700 PF00460 Flagella basal body rod protein AEA00_10700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AEA00_10705 PF00460 Flagella basal body rod protein AEA00_10705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AEA00_10710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AEA00_10710 PF00460 Flagella basal body rod protein AEA00_10715 PF02107 Flagellar L-ring protein AEA00_10720 PF02119 Flagellar P-ring protein AEA00_10725 PF10135 Rod binding protein AEA00_10725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AEA00_10730 PF07196 Flagellin hook IN motif AEA00_10730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AEA00_10735 PF00669 Bacterial flagellin N-terminal helical region AEA00_10740 PF00669 Bacterial flagellin N-terminal helical region AEA00_10740 PF00700 Bacterial flagellin C-terminal helical region AEA00_10745 PF02465 Flagellar hook-associated protein 2 N-terminus AEA00_10745 PF07195 Flagellar hook-associated protein 2 C-terminus AEA00_10745 PF07196 Flagellin hook IN motif AEA00_10750 PF02561 Flagellar protein FliS AEA00_10765 PF00072 Response regulator receiver domain AEA00_10765 PF00196 Bacterial regulatory proteins, luxR family AEA00_10770 PF04963 Sigma-54 factor, core binding domain AEA00_10770 PF04552 Sigma-54, DNA binding domain AEA00_10770 PF00309 Sigma-54 factor, Activator interacting domain (AID) AEA00_10775 PF01339 CheB methylesterase AEA00_10775 PF00072 Response regulator receiver domain AEA00_10780 PF00158 Sigma-54 interaction domain AEA00_10780 PF02954 Bacterial regulatory protein, Fis family AEA00_10780 PF00072 Response regulator receiver domain AEA00_10785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AEA00_10805 PF00535 Glycosyl transferase family 2 AEA00_10810 PF02049 Flagellar hook-basal body complex protein FliE AEA00_10815 PF08345 Flagellar M-ring protein C-terminal AEA00_10815 PF01514 Secretory protein of YscJ/FliF family AEA00_10820 PF01706 FliG C-terminal domain AEA00_10820 PF14841 FliG middle domain AEA00_10820 PF14842 FliG N-terminal domain AEA00_10830 PF18269 T3SS EscN ATPase C-terminal domain AEA00_10830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEA00_10850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AEA00_10850 PF02154 Flagellar motor switch protein FliM AEA00_10855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AEA00_10860 PF04347 Flagellar biosynthesis protein, FliO AEA00_10865 PF00813 FliP family AEA00_10875 PF01313 Bacterial export proteins, family 3 AEA00_10880 PF01311 Bacterial export proteins, family 1 AEA00_10885 PF00563 EAL domain AEA00_10885 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10885 PF13188 PAS domain AEA00_10885 PF03707 Bacterial signalling protein N terminal repeat AEA00_10890 PF03707 Bacterial signalling protein N terminal repeat AEA00_10890 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10890 PF00563 EAL domain AEA00_10895 PF03707 Bacterial signalling protein N terminal repeat AEA00_10895 PF00563 EAL domain AEA00_10895 PF00990 Diguanylate cyclase, GGDEF domain AEA00_10905 PF01312 FlhB HrpN YscU SpaS Family AEA00_10910 PF00771 FHIPEP family AEA00_10915 PF00448 SRP54-type protein, GTPase domain AEA00_10920 PF10609 NUBPL iron-transfer P-loop NTPase AEA00_10925 PF04545 Sigma-70, region 4 AEA00_10925 PF04539 Sigma-70 region 3 AEA00_10925 PF04542 Sigma-70 region 2 AEA00_10930 PF00072 Response regulator receiver domain AEA00_10935 PF04344 Chemotaxis phosphatase, CheZ AEA00_10940 PF01627 Hpt domain AEA00_10940 PF07194 P2 response regulator binding domain AEA00_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_10940 PF02895 Signal transducing histidine kinase, homodimeric domain AEA00_10940 PF01584 CheW-like domain AEA00_10975 PF00145 C-5 cytosine-specific DNA methylase AEA00_10980 PF02463 RecF/RecN/SMC N terminal domain AEA00_11000 PF01618 MotA/TolQ/ExbB proton channel family AEA00_11005 PF13677 Membrane MotB of proton-channel complex MotA/MotB AEA00_11005 PF00691 OmpA family AEA00_11010 PF13614 AAA domain AEA00_11015 PF01584 CheW-like domain AEA00_11025 PF00072 Response regulator receiver domain AEA00_11035 PF02203 Tar ligand binding domain homologue AEA00_11035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11035 PF00672 HAMP domain AEA00_11045 PF02203 Tar ligand binding domain homologue AEA00_11045 PF00672 HAMP domain AEA00_11045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11050 PF02203 Tar ligand binding domain homologue AEA00_11050 PF00672 HAMP domain AEA00_11055 PF02203 Tar ligand binding domain homologue AEA00_11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11055 PF00672 HAMP domain AEA00_11060 PF00672 HAMP domain AEA00_11060 PF02203 Tar ligand binding domain homologue AEA00_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11065 PF02203 Tar ligand binding domain homologue AEA00_11065 PF00672 HAMP domain AEA00_11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11070 PF00672 HAMP domain AEA00_11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11070 PF02203 Tar ligand binding domain homologue AEA00_11075 PF02203 Tar ligand binding domain homologue AEA00_11075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11075 PF00672 HAMP domain AEA00_11080 PF07238 PilZ domain AEA00_11080 PF07317 Flagellar regulator YcgR AEA00_11085 PF01584 CheW-like domain AEA00_11095 PF02203 Tar ligand binding domain homologue AEA00_11095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11095 PF00672 HAMP domain AEA00_11100 PF03705 CheR methyltransferase, all-alpha domain AEA00_11100 PF01739 CheR methyltransferase, SAM binding domain AEA00_11105 PF03975 CheD chemotactic sensory transduction AEA00_11110 PF00072 Response regulator receiver domain AEA00_11110 PF01339 CheB methylesterase AEA00_11115 PF03707 Bacterial signalling protein N terminal repeat AEA00_11115 PF00563 EAL domain AEA00_11115 PF00990 Diguanylate cyclase, GGDEF domain AEA00_11120 PF00561 alpha/beta hydrolase fold AEA00_11125 PF00330 Aconitase family (aconitate hydratase) AEA00_11125 PF06434 Aconitate hydratase 2 N-terminus AEA00_11125 PF11791 Aconitate B N-terminal domain AEA00_11140 PF00330 Aconitase family (aconitate hydratase) AEA00_11140 PF00694 Aconitase C-terminal domain AEA00_11150 PF13193 AMP-binding enzyme C-terminal domain AEA00_11150 PF00501 AMP-binding enzyme AEA00_11155 PF00378 Enoyl-CoA hydratase/isomerase AEA00_11160 PF01627 Hpt domain AEA00_11160 PF00072 Response regulator receiver domain AEA00_11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_11160 PF00512 His Kinase A (phospho-acceptor) domain AEA00_11165 PF00512 His Kinase A (phospho-acceptor) domain AEA00_11165 PF01627 Hpt domain AEA00_11165 PF00072 Response regulator receiver domain AEA00_11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_11170 PF00072 Response regulator receiver domain AEA00_11175 PF01336 OB-fold nucleic acid binding domain AEA00_11175 PF00152 tRNA synthetases class II (D, K and N) AEA00_11180 PF03462 PCRF domain AEA00_11180 PF00472 RF-1 domain AEA00_11185 PF04397 LytTr DNA-binding domain AEA00_11185 PF00072 Response regulator receiver domain AEA00_11210 PF02272 DHHA1 domain AEA00_11210 PF17768 RecJ OB domain AEA00_11210 PF01368 DHH family AEA00_11220 PF03449 Transcription elongation factor, N-terminal AEA00_11220 PF01272 Transcription elongation factor, GreA/GreB, C-term AEA00_11225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEA00_11225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AEA00_11225 PF02142 MGS-like domain AEA00_11235 PF00117 Glutamine amidotransferase class-I AEA00_11235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AEA00_11240 PF01113 Dihydrodipicolinate reductase, N-terminus AEA00_11240 PF05173 Dihydrodipicolinate reductase, C-terminus AEA00_11245 PF03473 MOSC domain AEA00_11245 PF03475 3-alpha domain AEA00_11250 PF00155 Aminotransferase class I and II AEA00_11265 PF07664 Ferrous iron transport protein B C terminus AEA00_11265 PF02421 Ferrous iron transport protein B AEA00_11265 PF07670 Nucleoside recognition AEA00_11275 PF00378 Enoyl-CoA hydratase/isomerase AEA00_11280 PF00682 HMGL-like AEA00_11285 PF00106 short chain dehydrogenase AEA00_11290 PF09285 Elongation factor P, C-terminal AEA00_11290 PF01132 Elongation factor P (EF-P) OB domain AEA00_11290 PF08207 Elongation factor P (EF-P) KOW-like domain AEA00_11310 PF01565 FAD binding domain AEA00_11310 PF02913 FAD linked oxidases, C-terminal domain AEA00_11315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEA00_11315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEA00_11330 PF13520 Amino acid permease AEA00_11335 PF13520 Amino acid permease AEA00_11340 PF00596 Class II Aldolase and Adducin N-terminal domain AEA00_11345 PF03079 ARD/ARD' family AEA00_11365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AEA00_11365 PF01502 Phosphoribosyl-AMP cyclohydrolase AEA00_11370 PF00977 Histidine biosynthesis protein AEA00_11375 PF00977 Histidine biosynthesis protein AEA00_11380 PF00117 Glutamine amidotransferase class-I AEA00_11385 PF00475 Imidazoleglycerol-phosphate dehydratase AEA00_11390 PF00155 Aminotransferase class I and II AEA00_11395 PF00815 Histidinol dehydrogenase AEA00_11400 PF08029 HisG, C-terminal domain AEA00_11400 PF01634 ATP phosphoribosyltransferase AEA00_11410 PF13393 Histidyl-tRNA synthetase AEA00_11410 PF03129 Anticodon binding domain AEA00_11415 PF00027 Cyclic nucleotide-binding domain AEA00_11415 PF13545 Crp-like helix-turn-helix domain AEA00_11425 PF14821 Threonine synthase N terminus AEA00_11425 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_11435 PF00288 GHMP kinases N terminal domain AEA00_11435 PF08544 GHMP kinases C terminal AEA00_11440 PF00696 Amino acid kinase family AEA00_11440 PF00742 Homoserine dehydrogenase AEA00_11440 PF13840 ACT domain AEA00_11440 PF01842 ACT domain AEA00_11440 PF03447 Homoserine dehydrogenase, NAD binding domain AEA00_11465 PF01527 Transposase AEA00_11475 PF17287 POTRA domain AEA00_11475 PF08479 POTRA domain, ShlB-type AEA00_11475 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AEA00_11485 PF02534 Type IV secretory system Conjugative DNA transfer AEA00_11490 PF00171 Aldehyde dehydrogenase family AEA00_11505 PF01180 Dihydroorotate dehydrogenase AEA00_11510 PF01565 FAD binding domain AEA00_11510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AEA00_11515 PF00892 EamA-like transporter family AEA00_11520 PF01177 Asp/Glu/Hydantoin racemase AEA00_11530 PF01569 PAP2 superfamily AEA00_11535 PF04551 GcpE protein AEA00_11550 PF00150 Cellulase (glycosyl hydrolase family 5) AEA00_11550 PF02013 Cellulose or protein binding domain AEA00_11555 PF00990 Diguanylate cyclase, GGDEF domain AEA00_11555 PF00360 Phytochrome region AEA00_11555 PF00563 EAL domain AEA00_11555 PF01590 GAF domain AEA00_11560 PF00474 Sodium:solute symporter family AEA00_11565 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_11565 PF14310 Fibronectin type III-like domain AEA00_11565 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_11585 PF00342 Phosphoglucose isomerase AEA00_11590 PF02261 Aspartate decarboxylase AEA00_11595 PF02569 Pantoate-beta-alanine ligase AEA00_11600 PF02548 Ketopantoate hydroxymethyltransferase AEA00_11605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AEA00_11610 PF12626 Polymerase A arginine-rich C-terminus AEA00_11610 PF12627 Probable RNA and SrmB- binding site of polymerase A AEA00_11610 PF01743 Poly A polymerase head domain AEA00_11620 PF02649 Type I GTP cyclohydrolase folE2 AEA00_11625 PF01520 N-acetylmuramoyl-L-alanine amidase AEA00_11645 PF00083 Sugar (and other) transporter AEA00_11655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AEA00_11655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AEA00_11665 PF17137 Domain of unknown function (DUF5110) AEA00_11665 PF01055 Glycosyl hydrolases family 31 AEA00_11665 PF16338 Domain of unknown function (DUF4968) AEA00_11680 PF03442 Carbohydrate binding domain X2 AEA00_11680 PF00942 Cellulose binding domain AEA00_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_11695 PF03466 LysR substrate binding domain AEA00_11700 PF01081 KDPG and KHG aldolase AEA00_11705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEA00_11705 PF13378 Enolase C-terminal domain-like AEA00_11710 PF08450 SMP-30/Gluconolactonase/LRE-like region AEA00_11715 PF05035 2-keto-3-deoxy-galactonokinase AEA00_11720 PF11953 Domain of unknown function (DUF3470) AEA00_11720 PF00037 4Fe-4S binding domain AEA00_11730 PF00701 Dihydrodipicolinate synthetase family AEA00_11745 PF00578 AhpC/TSA family AEA00_11750 PF02562 PhoH-like protein AEA00_11750 PF13638 PIN domain AEA00_11760 PF02581 Thiamine monophosphate synthase AEA00_11760 PF08543 Phosphomethylpyrimidine kinase AEA00_11785 PF03466 LysR substrate binding domain AEA00_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_11790 PF17954 Quercetinase C-terminal cupin domain AEA00_11790 PF02678 Pirin AEA00_11795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AEA00_11795 PF08447 PAS fold AEA00_11795 PF13426 PAS domain AEA00_11805 PF02599 Global regulator protein family AEA00_11810 PF01411 tRNA synthetases class II (A) AEA00_11810 PF02272 DHHA1 domain AEA00_11810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AEA00_11815 PF02631 RecX family AEA00_11820 PF00154 recA bacterial DNA recombination protein AEA00_11825 PF00717 Peptidase S24-like AEA00_11825 PF01726 LexA DNA binding domain AEA00_11830 PF03109 ABC1 family AEA00_11840 PF07715 TonB-dependent Receptor Plug Domain AEA00_11840 PF00593 TonB dependent receptor AEA00_11845 PF02464 Competence-damaged protein AEA00_11850 PF16360 GTP-binding GTPase Middle Region AEA00_11850 PF13167 GTP-binding GTPase N-terminal AEA00_11850 PF01926 50S ribosome-binding GTPase AEA00_11855 PF17209 Hfq protein AEA00_11865 PF00809 Pterin binding enzyme AEA00_11870 PF06480 FtsH Extracellular AEA00_11870 PF17862 AAA+ lid domain AEA00_11870 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_11870 PF01434 Peptidase family M41 AEA00_11875 PF01728 FtsJ-like methyltransferase AEA00_11880 PF01985 CRS1 / YhbY (CRM) domain AEA00_11885 PF04430 Protein of unknown function (DUF498/DUF598) AEA00_11890 PF01551 Peptidase family M23 AEA00_11890 PF01476 LysM domain AEA00_11895 PF09335 SNARE associated Golgi protein AEA00_11905 PF01975 Survival protein SurE AEA00_11910 PF01713 Smr domain AEA00_11915 PF01142 tRNA pseudouridine synthase D (TruD) AEA00_11920 PF02542 YgbB family AEA00_11925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AEA00_11930 PF04977 Septum formation initiator AEA00_11935 PF03952 Enolase, N-terminal domain AEA00_11935 PF00113 Enolase, C-terminal TIM barrel domain AEA00_11945 PF00793 DAHP synthetase I family AEA00_11950 PF06418 CTP synthase N-terminus AEA00_11950 PF00117 Glutamine amidotransferase class-I AEA00_11960 PF00204 DNA gyrase B AEA00_11960 PF00986 DNA gyrase B subunit, carboxyl terminus AEA00_11960 PF01751 Toprim domain AEA00_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_11965 PF02611 CDP-diacylglycerol pyrophosphatase AEA00_11980 PF01384 Phosphate transporter family AEA00_11990 PF03471 Transporter associated domain AEA00_11990 PF00571 CBS domain AEA00_11990 PF01595 Cyclin M transmembrane N-terminal domain AEA00_12005 PF00296 Luciferase-like monooxygenase AEA00_12010 PF07690 Major Facilitator Superfamily AEA00_12015 PF00664 ABC transporter transmembrane region AEA00_12015 PF00005 ABC transporter AEA00_12035 PF00534 Glycosyl transferases group 1 AEA00_12035 PF13579 Glycosyl transferase 4-like domain AEA00_12040 PF00534 Glycosyl transferases group 1 AEA00_12040 PF13439 Glycosyltransferase Family 4 AEA00_12050 PF01979 Amidohydrolase family AEA00_12050 PF13382 Adenine deaminase C-terminal domain AEA00_12070 PF00535 Glycosyl transferase family 2 AEA00_12075 PF01943 Polysaccharide biosynthesis protein AEA00_12080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AEA00_12085 PF05523 WxcM-like, C-terminal AEA00_12090 PF01292 Prokaryotic cytochrome b561 AEA00_12100 PF00034 Cytochrome c AEA00_12110 PF04542 Sigma-70 region 2 AEA00_12110 PF08281 Sigma-70, region 4 AEA00_12120 PF00082 Subtilase family AEA00_12125 PF01578 Cytochrome C assembly protein AEA00_12130 PF04995 Heme exporter protein D (CcmD) AEA00_12135 PF03100 CcmE AEA00_12140 PF01578 Cytochrome C assembly protein AEA00_12140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AEA00_12145 PF08534 Redoxin AEA00_12150 PF03918 Cytochrome C biogenesis protein AEA00_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_12160 PF13426 PAS domain AEA00_12160 PF00072 Response regulator receiver domain AEA00_12165 PF06745 KaiC AEA00_12170 PF01627 Hpt domain AEA00_12170 PF00512 His Kinase A (phospho-acceptor) domain AEA00_12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_12170 PF00672 HAMP domain AEA00_12170 PF00072 Response regulator receiver domain AEA00_12170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AEA00_12175 PF00072 Response regulator receiver domain AEA00_12175 PF00512 His Kinase A (phospho-acceptor) domain AEA00_12175 PF13188 PAS domain AEA00_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_12175 PF08448 PAS fold AEA00_12210 PF02585 GlcNAc-PI de-N-acetylase AEA00_12235 PF01527 Transposase AEA00_12250 PF01527 Transposase AEA00_12270 PF00239 Resolvase, N terminal domain AEA00_12270 PF02796 Helix-turn-helix domain of resolvase AEA00_12295 PF05598 Transposase domain (DUF772) AEA00_12295 PF01609 Transposase DDE domain AEA00_12300 PF13276 HTH-like domain AEA00_12300 PF13683 Integrase core domain AEA00_12305 PF01527 Transposase AEA00_12310 PF01527 Transposase AEA00_12315 PF13276 HTH-like domain AEA00_12315 PF13683 Integrase core domain AEA00_12320 PF01609 Transposase DDE domain AEA00_12320 PF05598 Transposase domain (DUF772) AEA00_12325 PF13276 HTH-like domain AEA00_12325 PF13683 Integrase core domain AEA00_12335 PF01527 Transposase AEA00_12340 PF13276 HTH-like domain AEA00_12340 PF13683 Integrase core domain AEA00_12345 PF13683 Integrase core domain AEA00_12345 PF13276 HTH-like domain AEA00_12350 PF01527 Transposase AEA00_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_12360 PF03466 LysR substrate binding domain AEA00_12365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEA00_12365 PF02403 Seryl-tRNA synthetase N-terminal domain AEA00_12370 PF03544 Gram-negative bacterial TonB protein C-terminal AEA00_12375 PF03544 Gram-negative bacterial TonB protein C-terminal AEA00_12380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AEA00_12385 PF01817 Chorismate mutase type II AEA00_12385 PF01842 ACT domain AEA00_12385 PF00800 Prephenate dehydratase AEA00_12390 PF00266 Aminotransferase class-V AEA00_12395 PF00174 Oxidoreductase molybdopterin binding domain AEA00_12400 PF01794 Ferric reductase like transmembrane component AEA00_12425 PF07702 UTRA domain AEA00_12425 PF00392 Bacterial regulatory proteins, gntR family AEA00_12435 PF01979 Amidohydrolase family AEA00_12440 PF00221 Aromatic amino acid lyase AEA00_12450 PF17391 Urocanase N-terminal domain AEA00_12450 PF01175 Urocanase Rossmann-like domain AEA00_12450 PF17392 Urocanase C-terminal domain AEA00_12460 PF13360 PQQ-like domain AEA00_12465 PF00521 DNA gyrase/topoisomerase IV, subunit A AEA00_12465 PF03989 DNA gyrase C-terminal domain, beta-propeller AEA00_12470 PF01008 Initiation factor 2 subunit family AEA00_12480 PF00152 tRNA synthetases class II (D, K and N) AEA00_12485 PF12826 Helix-hairpin-helix motif AEA00_12485 PF01653 NAD-dependent DNA ligase adenylation domain AEA00_12485 PF00533 BRCA1 C Terminus (BRCT) domain AEA00_12485 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AEA00_12485 PF03120 NAD-dependent DNA ligase OB-fold domain AEA00_12490 PF00155 Aminotransferase class I and II AEA00_12495 PF04354 ZipA, C-terminal FtsZ-binding domain AEA00_12500 PF02463 RecF/RecN/SMC N terminal domain AEA00_12510 PF01281 Ribosomal protein L9, N-terminal domain AEA00_12510 PF03948 Ribosomal protein L9, C-terminal domain AEA00_12515 PF01084 Ribosomal protein S18 AEA00_12520 PF01250 Ribosomal protein S6 AEA00_12525 PF01521 Iron-sulphur cluster biosynthesis AEA00_12530 PF01336 OB-fold nucleic acid binding domain AEA00_12530 PF00152 tRNA synthetases class II (D, K and N) AEA00_12555 PF00484 Carbonic anhydrase AEA00_12560 PF06052 3-hydroxyanthranilic acid dioxygenase AEA00_12570 PF00266 Aminotransferase class-V AEA00_12575 PF01494 FAD binding domain AEA00_12580 PF08411 Exonuclease C-terminal AEA00_12580 PF00929 Exonuclease AEA00_12605 PF01513 ATP-NAD kinase AEA00_12610 PF01170 Putative RNA methylase family UPF0020 AEA00_12610 PF10672 S-adenosylmethionine-dependent methyltransferase AEA00_12610 PF02926 THUMP domain AEA00_12650 PF00581 Rhodanese-like domain AEA00_12655 PF00293 NUDIX domain AEA00_12660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AEA00_12660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEA00_12665 PF00378 Enoyl-CoA hydratase/isomerase AEA00_12675 PF10576 Iron-sulfur binding domain of endonuclease III AEA00_12675 PF00633 Helix-hairpin-helix motif AEA00_12675 PF00730 HhH-GPD superfamily base excision DNA repair protein AEA00_12680 PF00916 Sulfate permease family AEA00_12680 PF01740 STAS domain AEA00_12685 PF00484 Carbonic anhydrase AEA00_12700 PF12849 PBP superfamily domain AEA00_12705 PF12849 PBP superfamily domain AEA00_12710 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_12715 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_12720 PF00005 ABC transporter AEA00_12725 PF01895 PhoU domain AEA00_12735 PF00929 Exonuclease AEA00_12740 PF00990 Diguanylate cyclase, GGDEF domain AEA00_12740 PF07694 5TMR of 5TMR-LYT AEA00_12745 PF00588 SpoU rRNA Methylase family AEA00_12745 PF08032 RNA 2'-O ribose methyltransferase substrate binding AEA00_12755 PF00575 S1 RNA binding domain AEA00_12755 PF00773 RNB domain AEA00_12755 PF08206 Ribonuclease B OB domain AEA00_12755 PF08461 Ribonuclease R winged-helix domain AEA00_12755 PF17876 Cold shock domain AEA00_12770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_12770 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_12770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_12775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_12775 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_12775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_12780 PF01209 ubiE/COQ5 methyltransferase family AEA00_12785 PF02574 Homocysteine S-methyltransferase AEA00_12785 PF00809 Pterin binding enzyme AEA00_12790 PF00809 Pterin binding enzyme AEA00_12790 PF02310 B12 binding domain AEA00_12790 PF02574 Homocysteine S-methyltransferase AEA00_12790 PF02965 Vitamin B12 dependent methionine synthase, activation domain AEA00_12790 PF02607 B12 binding domain AEA00_12800 PF00294 pfkB family carbohydrate kinase AEA00_12805 PF07690 Major Facilitator Superfamily AEA00_12810 PF00356 Bacterial regulatory proteins, lacI family AEA00_12830 PF04102 SlyX AEA00_12835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AEA00_12835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AEA00_12835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AEA00_12840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEA00_12840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AEA00_12845 PF00255 Glutathione peroxidase AEA00_12850 PF00392 Bacterial regulatory proteins, gntR family AEA00_12855 PF00005 ABC transporter AEA00_12880 PF00206 Lyase AEA00_12880 PF10415 Fumarase C C-terminus AEA00_12890 PF08328 Adenylosuccinate lyase C-terminal AEA00_12890 PF00206 Lyase AEA00_12895 PF08007 Cupin superfamily protein AEA00_12905 PF00676 Dehydrogenase E1 component AEA00_12905 PF16078 2-oxoglutarate dehydrogenase N-terminus AEA00_12905 PF16870 2-oxoglutarate dehydrogenase C-terminal AEA00_12905 PF02779 Transketolase, pyrimidine binding domain AEA00_12910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AEA00_12910 PF00364 Biotin-requiring enzyme AEA00_12910 PF02817 e3 binding domain AEA00_12915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AEA00_12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_12920 PF03641 Possible lysine decarboxylase AEA00_12925 PF01205 Uncharacterized protein family UPF0029 AEA00_12930 PF00664 ABC transporter transmembrane region AEA00_12930 PF00005 ABC transporter AEA00_12935 PF03466 LysR substrate binding domain AEA00_12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_12940 PF00005 ABC transporter AEA00_12940 PF00664 ABC transporter transmembrane region AEA00_12940 PF03412 Peptidase C39 family AEA00_12965 PF08543 Phosphomethylpyrimidine kinase AEA00_12970 PF01556 DnaJ C terminal domain AEA00_12970 PF00226 DnaJ domain AEA00_12970 PF00684 DnaJ central domain AEA00_12975 PF00012 Hsp70 protein AEA00_12980 PF01025 GrpE AEA00_12985 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AEA00_12985 PF01628 HrcA protein C terminal domain AEA00_12990 PF02463 RecF/RecN/SMC N terminal domain AEA00_12995 PF01475 Ferric uptake regulator family AEA00_13000 PF04355 SmpA / OmlA family AEA00_13005 PF03658 RnfH family Ubiquitin AEA00_13015 PF01668 SmpB protein AEA00_13020 PF00082 Subtilase family AEA00_13070 PF01527 Transposase AEA00_13075 PF13276 HTH-like domain AEA00_13075 PF13683 Integrase core domain AEA00_13085 PF00271 Helicase conserved C-terminal domain AEA00_13085 PF00176 SNF2 family N-terminal domain AEA00_13085 PF12419 SNF2 Helicase protein AEA00_13125 PF00990 Diguanylate cyclase, GGDEF domain AEA00_13135 PF08448 PAS fold AEA00_13135 PF00990 Diguanylate cyclase, GGDEF domain AEA00_13140 PF02321 Outer membrane efflux protein AEA00_13150 PF00873 AcrB/AcrD/AcrF family AEA00_13155 PF00529 HlyD membrane-fusion protein of T1SS AEA00_13155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_13165 PF03466 LysR substrate binding domain AEA00_13165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_13170 PF00691 OmpA family AEA00_13170 PF05736 OprF membrane domain AEA00_13175 PF03441 FAD binding domain of DNA photolyase AEA00_13175 PF00875 DNA photolyase AEA00_13180 PF00772 DnaB-like helicase N terminal domain AEA00_13180 PF03796 DnaB-like helicase C terminal domain AEA00_13185 PF03358 NADPH-dependent FMN reductase AEA00_13190 PF00733 Asparagine synthase AEA00_13190 PF13537 Glutamine amidotransferase domain AEA00_13195 PF00043 Glutathione S-transferase, C-terminal domain AEA00_13195 PF02798 Glutathione S-transferase, N-terminal domain AEA00_13205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_13205 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_13205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_13220 PF01026 TatD related DNase AEA00_13225 PF00899 ThiF family AEA00_13240 PF00313 'Cold-shock' DNA-binding domain AEA00_13250 PF02253 Phospholipase A1 AEA00_13255 PF00484 Carbonic anhydrase AEA00_13270 PF05681 Fumarate hydratase (Fumerase) AEA00_13270 PF05683 Fumarase C-terminus AEA00_13275 PF00005 ABC transporter AEA00_13280 PF00970 Oxidoreductase FAD-binding domain AEA00_13280 PF00175 Oxidoreductase NAD-binding domain AEA00_13285 PF00255 Glutathione peroxidase AEA00_13290 PF01432 Peptidase family M3 AEA00_13295 PF12802 MarR family AEA00_13320 PF00854 POT family AEA00_13330 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_13330 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_13330 PF14310 Fibronectin type III-like domain AEA00_13350 PF07690 Major Facilitator Superfamily AEA00_13355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_13355 PF00529 HlyD membrane-fusion protein of T1SS AEA00_13360 PF02321 Outer membrane efflux protein AEA00_13375 PF00521 DNA gyrase/topoisomerase IV, subunit A AEA00_13375 PF03989 DNA gyrase C-terminal domain, beta-propeller AEA00_13380 PF05724 Thiopurine S-methyltransferase (TPMT) AEA00_13385 PF00210 Ferritin-like domain AEA00_13390 PF01804 Penicillin amidase AEA00_13395 PF07715 TonB-dependent Receptor Plug Domain AEA00_13395 PF00593 TonB dependent receptor AEA00_13405 PF00733 Asparagine synthase AEA00_13405 PF13537 Glutamine amidotransferase domain AEA00_13415 PF01546 Peptidase family M20/M25/M40 AEA00_13415 PF07687 Peptidase dimerisation domain AEA00_13420 PF03960 ArsC family AEA00_13430 PF14602 Hexapeptide repeat of succinyl-transferase AEA00_13430 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AEA00_13430 PF00132 Bacterial transferase hexapeptide (six repeats) AEA00_13435 PF08335 GlnD PII-uridylyltransferase AEA00_13435 PF01966 HD domain AEA00_13435 PF01909 Nucleotidyltransferase domain AEA00_13440 PF00557 Metallopeptidase family M24 AEA00_13460 PF05229 Spore Coat Protein U domain AEA00_13475 PF00318 Ribosomal protein S2 AEA00_13480 PF00889 Elongation factor TS AEA00_13485 PF00990 Diguanylate cyclase, GGDEF domain AEA00_13485 PF00072 Response regulator receiver domain AEA00_13490 PF00696 Amino acid kinase family AEA00_13495 PF01765 Ribosome recycling factor AEA00_13500 PF01255 Putative undecaprenyl diphosphate synthase AEA00_13510 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AEA00_13510 PF13288 DXP reductoisomerase C-terminal domain AEA00_13510 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AEA00_13515 PF17820 PDZ domain AEA00_13515 PF02163 Peptidase family M50 AEA00_13520 PF01103 Surface antigen AEA00_13520 PF07244 Surface antigen variable number repeat AEA00_13530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AEA00_13530 PF00132 Bacterial transferase hexapeptide (six repeats) AEA00_13535 PF07977 FabA-like domain AEA00_13540 PF00132 Bacterial transferase hexapeptide (six repeats) AEA00_13540 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AEA00_13545 PF02684 Lipid-A-disaccharide synthetase AEA00_13550 PF01351 Ribonuclease HII AEA00_13555 PF02811 PHP domain AEA00_13555 PF01336 OB-fold nucleic acid binding domain AEA00_13555 PF14579 Helix-hairpin-helix motif AEA00_13555 PF07733 Bacterial DNA polymerase III alpha NTPase domain AEA00_13555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AEA00_13560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AEA00_13590 PF03551 Transcriptional regulator PadR-like family AEA00_13620 PF02592 Putative vitamin uptake transporter AEA00_13630 PF02574 Homocysteine S-methyltransferase AEA00_13635 PF00324 Amino acid permease AEA00_13645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEA00_13655 PF00593 TonB dependent receptor AEA00_13655 PF07715 TonB-dependent Receptor Plug Domain AEA00_13660 PF09334 tRNA synthetases class I (M) AEA00_13660 PF01588 Putative tRNA binding domain AEA00_13685 PF04542 Sigma-70 region 2 AEA00_13685 PF04545 Sigma-70, region 4 AEA00_13730 PF01042 Endoribonuclease L-PSP AEA00_13740 PF03706 Lysylphosphatidylglycerol synthase TM region AEA00_13740 PF09924 Uncharacterised conserved protein (DUF2156) AEA00_13775 PF07690 Major Facilitator Superfamily AEA00_13780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEA00_13805 PF03831 PhnA domain AEA00_13805 PF08274 PhnA Zinc-Ribbon AEA00_13815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEA00_13850 PF01258 Prokaryotic dksA/traR C4-type zinc finger AEA00_13860 PF07043 Protein of unknown function (DUF1328) AEA00_13865 PF01863 Protein of unknown function DUF45 AEA00_13875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AEA00_13875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AEA00_13880 PF00082 Subtilase family AEA00_13880 PF03797 Autotransporter beta-domain AEA00_13885 PF00108 Thiolase, N-terminal domain AEA00_13885 PF02803 Thiolase, C-terminal domain AEA00_13900 PF00990 Diguanylate cyclase, GGDEF domain AEA00_13900 PF00072 Response regulator receiver domain AEA00_13915 PF04675 DNA ligase N terminus AEA00_13915 PF01068 ATP dependent DNA ligase domain AEA00_13915 PF04679 ATP dependent DNA ligase C terminal region AEA00_13925 PF04679 ATP dependent DNA ligase C terminal region AEA00_13925 PF04675 DNA ligase N terminus AEA00_13925 PF01068 ATP dependent DNA ligase domain AEA00_13930 PF00271 Helicase conserved C-terminal domain AEA00_13930 PF08494 DEAD/H associated AEA00_13930 PF00270 DEAD/DEAH box helicase AEA00_13940 PF01494 FAD binding domain AEA00_13945 PF00313 'Cold-shock' DNA-binding domain AEA00_13950 PF01048 Phosphorylase superfamily AEA00_13960 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_13965 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AEA00_13970 PF01266 FAD dependent oxidoreductase AEA00_13970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AEA00_13975 PF01323 DSBA-like thioredoxin domain AEA00_13990 PF05958 tRNA (Uracil-5-)-methyltransferase AEA00_13995 PF00486 Transcriptional regulatory protein, C terminal AEA00_13995 PF00072 Response regulator receiver domain AEA00_14000 PF02565 Recombination protein O C terminal AEA00_14000 PF11967 Recombination protein O N terminal AEA00_14005 PF07650 KH domain AEA00_14005 PF01926 50S ribosome-binding GTPase AEA00_14010 PF00035 Double-stranded RNA binding motif AEA00_14010 PF14622 Ribonuclease-III-like AEA00_14020 PF10502 Signal peptidase, peptidase S26 AEA00_14025 PF00679 Elongation factor G C-terminus AEA00_14025 PF03144 Elongation factor Tu domain 2 AEA00_14025 PF00009 Elongation factor Tu GTP binding domain AEA00_14025 PF06421 GTP-binding protein LepA C-terminus AEA00_14030 PF13180 PDZ domain AEA00_14040 PF04542 Sigma-70 region 2 AEA00_14040 PF08281 Sigma-70, region 4 AEA00_14045 PF00378 Enoyl-CoA hydratase/isomerase AEA00_14045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AEA00_14045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AEA00_14050 PF01545 Cation efflux family AEA00_14055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AEA00_14055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AEA00_14060 PF00378 Enoyl-CoA hydratase/isomerase AEA00_14065 PF00378 Enoyl-CoA hydratase/isomerase AEA00_14070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEA00_14070 PF02770 Acyl-CoA dehydrogenase, middle domain AEA00_14070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEA00_14075 PF00171 Aldehyde dehydrogenase family AEA00_14080 PF09856 Predicted transcriptional regulator (DUF2083) AEA00_14080 PF06114 IrrE N-terminal-like domain AEA00_14080 PF01381 Helix-turn-helix AEA00_14090 PF07745 Glycosyl hydrolase family 53 AEA00_14095 PF00703 Glycosyl hydrolases family 2 AEA00_14095 PF02837 Glycosyl hydrolases family 2, sugar binding domain AEA00_14095 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AEA00_14095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AEA00_14095 PF16355 Domain of unknown function (DUF4982) AEA00_14125 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_14125 PF14310 Fibronectin type III-like domain AEA00_14125 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_14175 PF01464 Transglycosylase SLT domain AEA00_14200 PF02874 ATP synthase alpha/beta family, beta-barrel domain AEA00_14200 PF18269 T3SS EscN ATPase C-terminal domain AEA00_14200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEA00_14215 PF01514 Secretory protein of YscJ/FliF family AEA00_14230 PF01312 FlhB HrpN YscU SpaS Family AEA00_14235 PF00771 FHIPEP family AEA00_14250 PF00813 FliP family AEA00_14255 PF01313 Bacterial export proteins, family 3 AEA00_14285 PF03211 Pectate lyase AEA00_14295 PF05819 NolX protein AEA00_14305 PF00440 Bacterial regulatory proteins, tetR family AEA00_14310 PF00155 Aminotransferase class I and II AEA00_14330 PF03301 Tryptophan 2,3-dioxygenase AEA00_14335 PF03301 Tryptophan 2,3-dioxygenase AEA00_14345 PF01624 MutS domain I AEA00_14345 PF05188 MutS domain II AEA00_14345 PF05190 MutS family domain IV AEA00_14345 PF00488 MutS domain V AEA00_14345 PF05192 MutS domain III AEA00_14355 PF00141 Peroxidase AEA00_14360 PF01479 S4 domain AEA00_14365 PF01554 MatE AEA00_14370 PF01245 Ribosomal protein L19 AEA00_14375 PF01746 tRNA (Guanine-1)-methyltransferase AEA00_14380 PF05239 PRC-barrel domain AEA00_14380 PF01782 RimM N-terminal domain AEA00_14385 PF00886 Ribosomal protein S16 AEA00_14395 PF03060 Nitronate monooxygenase AEA00_14400 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AEA00_14410 PF00448 SRP54-type protein, GTPase domain AEA00_14410 PF02881 SRP54-type protein, helical bundle domain AEA00_14410 PF02978 Signal peptide binding domain AEA00_14415 PF01578 Cytochrome C assembly protein AEA00_14420 PF01263 Aldose 1-epimerase AEA00_14425 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AEA00_14430 PF03466 LysR substrate binding domain AEA00_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_14445 PF00072 Response regulator receiver domain AEA00_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14450 PF00072 Response regulator receiver domain AEA00_14450 PF13426 PAS domain AEA00_14455 PF00672 HAMP domain AEA00_14455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AEA00_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14455 PF00512 His Kinase A (phospho-acceptor) domain AEA00_14455 PF00072 Response regulator receiver domain AEA00_14455 PF01627 Hpt domain AEA00_14460 PF01739 CheR methyltransferase, SAM binding domain AEA00_14460 PF03705 CheR methyltransferase, all-alpha domain AEA00_14465 PF01339 CheB methylesterase AEA00_14470 PF13493 Domain of unknown function (DUF4118) AEA00_14470 PF00512 His Kinase A (phospho-acceptor) domain AEA00_14470 PF02702 Osmosensitive K+ channel His kinase sensor domain AEA00_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14470 PF13492 GAF domain AEA00_14475 PF07237 Protein of unknown function (DUF1428) AEA00_14480 PF00085 Thioredoxin AEA00_14485 PF07715 TonB-dependent Receptor Plug Domain AEA00_14485 PF00593 TonB dependent receptor AEA00_14495 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AEA00_14495 PF04616 Glycosyl hydrolases family 43 AEA00_14505 PF00512 His Kinase A (phospho-acceptor) domain AEA00_14505 PF00072 Response regulator receiver domain AEA00_14505 PF13188 PAS domain AEA00_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14505 PF08448 PAS fold AEA00_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14510 PF00672 HAMP domain AEA00_14510 PF00512 His Kinase A (phospho-acceptor) domain AEA00_14510 PF00072 Response regulator receiver domain AEA00_14510 PF17149 Periplasmic sensor domain found in signal transduction proteins AEA00_14510 PF01627 Hpt domain AEA00_14520 PF13581 Histidine kinase-like ATPase domain AEA00_14525 PF01740 STAS domain AEA00_14530 PF01740 STAS domain AEA00_14530 PF08678 Rsbr N terminal AEA00_14535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEA00_14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14545 PF00183 Hsp90 protein AEA00_14550 PF12833 Helix-turn-helix domain AEA00_14560 PF05656 Protein of unknown function (DUF805) AEA00_14565 PF18073 Rubredoxin metal binding domain AEA00_14575 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AEA00_14580 PF00510 Cytochrome c oxidase subunit III AEA00_14585 PF00115 Cytochrome C and Quinol oxidase polypeptide I AEA00_14590 PF06481 COX Aromatic Rich Motif AEA00_14590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AEA00_14600 PF02401 LytB protein AEA00_14605 PF01252 Signal peptidase (SPase) II AEA00_14610 PF08264 Anticodon-binding domain of tRNA AEA00_14610 PF00133 tRNA synthetases class I (I, L, M and V) AEA00_14610 PF06827 Zinc finger found in FPG and IleRS AEA00_14615 PF01687 Riboflavin kinase AEA00_14615 PF06574 FAD synthetase AEA00_14620 PF03023 Lipid II flippase MurJ AEA00_14625 PF01649 Ribosomal protein S20 AEA00_14630 PF01018 GTP1/OBG AEA00_14630 PF01926 50S ribosome-binding GTPase AEA00_14635 PF01016 Ribosomal L27 protein AEA00_14640 PF00829 Ribosomal prokaryotic L21 protein AEA00_14645 PF00005 ABC transporter AEA00_14645 PF17755 UvrA DNA-binding domain AEA00_14645 PF17760 UvrA interaction domain AEA00_14655 PF00378 Enoyl-CoA hydratase/isomerase AEA00_14670 PF04542 Sigma-70 region 2 AEA00_14670 PF08281 Sigma-70, region 4 AEA00_14680 PF04377 Arginine-tRNA-protein transferase, C terminus AEA00_14680 PF04376 Arginine-tRNA-protein transferase, N terminus AEA00_14705 PF01370 NAD dependent epimerase/dehydratase family AEA00_14705 PF02222 ATP-grasp domain AEA00_14735 PF00730 HhH-GPD superfamily base excision DNA repair protein AEA00_14760 PF00072 Response regulator receiver domain AEA00_14760 PF00196 Bacterial regulatory proteins, luxR family AEA00_14765 PF07730 Histidine kinase AEA00_14775 PF03775 Septum formation inhibitor MinC, C-terminal domain AEA00_14775 PF05209 Septum formation inhibitor MinC, N-terminal domain AEA00_14780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AEA00_14785 PF03776 Septum formation topological specificity factor MinE AEA00_14795 PF00512 His Kinase A (phospho-acceptor) domain AEA00_14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_14800 PF00486 Transcriptional regulatory protein, C terminal AEA00_14800 PF00072 Response regulator receiver domain AEA00_14815 PF00884 Sulfatase AEA00_14815 PF08019 Phosphoethanolamine transferase EptA/EptB AEA00_14835 PF07690 Major Facilitator Superfamily AEA00_14840 PF02347 Glycine cleavage system P-protein AEA00_14860 PF00248 Aldo/keto reductase family AEA00_14865 PF00199 Catalase AEA00_14865 PF06628 Catalase-related immune-responsive AEA00_14865 PF18011 C-terminal domain found in long catalases AEA00_14875 PF02311 AraC-like ligand binding domain AEA00_14875 PF12833 Helix-turn-helix domain AEA00_14890 PF00326 Prolyl oligopeptidase family AEA00_14890 PF07676 WD40-like Beta Propeller Repeat AEA00_14890 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AEA00_14900 PF03169 OPT oligopeptide transporter protein AEA00_14910 PF07733 Bacterial DNA polymerase III alpha NTPase domain AEA00_14910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AEA00_14910 PF14579 Helix-hairpin-helix motif AEA00_14910 PF02811 PHP domain AEA00_14925 PF01726 LexA DNA binding domain AEA00_14925 PF00717 Peptidase S24-like AEA00_14950 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEA00_14950 PF01799 [2Fe-2S] binding domain AEA00_14950 PF00111 2Fe-2S iron-sulfur cluster binding domain AEA00_14955 PF03450 CO dehydrogenase flavoprotein C-terminal domain AEA00_14955 PF00941 FAD binding domain in molybdopterin dehydrogenase AEA00_14960 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AEA00_14960 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AEA00_14965 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_14965 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_14965 PF14310 Fibronectin type III-like domain AEA00_14975 PF17755 UvrA DNA-binding domain AEA00_14995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_15005 PF00106 short chain dehydrogenase AEA00_15010 PF07971 Glycosyl hydrolase family 92 AEA00_15010 PF17678 Glycosyl hydrolase family 92 N-terminal domain AEA00_15025 PF00723 Glycosyl hydrolases family 15 AEA00_15035 PF01256 Carbohydrate kinase AEA00_15040 PF13456 Reverse transcriptase-like AEA00_15040 PF00300 Histidine phosphatase superfamily (branch 1) AEA00_15070 PF18766 SWI2/SNF2 ATPase AEA00_15070 PF12008 Type I restriction and modification enzyme - subunit R C terminal AEA00_15070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AEA00_15075 PF01420 Type I restriction modification DNA specificity domain AEA00_15085 PF02384 N-6 DNA Methylase AEA00_15135 PF01433 Peptidase family M1 domain AEA00_15135 PF11838 ERAP1-like C-terminal domain AEA00_15140 PF00709 Adenylosuccinate synthetase AEA00_15150 PF01145 SPFH domain / Band 7 family AEA00_15155 PF12221 Bacterial membrane protein N terminal AEA00_15155 PF01145 SPFH domain / Band 7 family AEA00_15160 PF00072 Response regulator receiver domain AEA00_15165 PF01556 DnaJ C terminal domain AEA00_15165 PF00226 DnaJ domain AEA00_15170 PF00011 Hsp20/alpha crystallin family AEA00_15175 PF08534 Redoxin AEA00_15185 PF00912 Transglycosylase AEA00_15185 PF00905 Penicillin binding protein transpeptidase domain AEA00_15185 PF06832 Penicillin-Binding Protein C-terminus Family AEA00_15210 PF17962 Bacterial macroglobulin domain 6 AEA00_15210 PF00207 Alpha-2-macroglobulin family AEA00_15210 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AEA00_15210 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AEA00_15210 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AEA00_15210 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AEA00_15210 PF07703 Alpha-2-macroglobulin bait region domain AEA00_15210 PF01835 MG2 domain AEA00_15220 PF07715 TonB-dependent Receptor Plug Domain AEA00_15220 PF00593 TonB dependent receptor AEA00_15225 PF04303 PrpF protein AEA00_15235 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AEA00_15240 PF00330 Aconitase family (aconitate hydratase) AEA00_15240 PF00694 Aconitase C-terminal domain AEA00_15245 PF00285 Citrate synthase, C-terminal domain AEA00_15255 PF06506 Propionate catabolism activator AEA00_15255 PF00158 Sigma-54 interaction domain AEA00_15255 PF02954 Bacterial regulatory protein, Fis family AEA00_15290 PF09115 DNA polymerase III, delta subunit, C terminal AEA00_15295 PF02618 YceG-like family AEA00_15300 PF04715 Anthranilate synthase component I, N terminal region AEA00_15300 PF00425 chorismate binding enzyme AEA00_15305 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_15305 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_15310 PF00550 Phosphopantetheine attachment site AEA00_15320 PF00698 Acyl transferase domain AEA00_15325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AEA00_15325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AEA00_15330 PF01783 Ribosomal L32p protein family AEA00_15335 PF02620 Large ribosomal RNA subunit accumulation protein YceD AEA00_15340 PF02545 Maf-like protein AEA00_15360 PF00535 Glycosyl transferase family 2 AEA00_15370 PF07726 ATPase family associated with various cellular activities (AAA) AEA00_15370 PF17863 AAA lid domain AEA00_15380 PF13559 Domain of unknown function (DUF4129) AEA00_15380 PF01841 Transglutaminase-like superfamily AEA00_15380 PF11992 Domain of unknown function (DUF3488) AEA00_15390 PF01230 HIT domain AEA00_15395 PF02132 RecR protein AEA00_15395 PF13662 Toprim domain AEA00_15400 PF02575 YbaB/EbfC DNA-binding family AEA00_15405 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AEA00_15405 PF12169 DNA polymerase III subunits gamma and tau domain III AEA00_15405 PF12170 DNA polymerase III tau subunit V interacting with alpha AEA00_15415 PF02391 MoaE protein AEA00_15420 PF02597 ThiS family AEA00_15425 PF01967 MoaC family AEA00_15435 PF04055 Radical SAM superfamily AEA00_15435 PF06463 Molybdenum Cofactor Synthesis C AEA00_15440 PF12706 Beta-lactamase superfamily domain AEA00_15440 PF00753 Metallo-beta-lactamase superfamily AEA00_15450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AEA00_15470 PF00929 Exonuclease AEA00_15475 PF00075 RNase H AEA00_15485 PF16123 Hydroxyacylglutathione hydrolase C-terminus AEA00_15485 PF00753 Metallo-beta-lactamase superfamily AEA00_15490 PF05257 CHAP domain AEA00_15490 PF01476 LysM domain AEA00_15520 PF00216 Bacterial DNA-binding protein AEA00_15525 PF05362 Lon protease (S16) C-terminal proteolytic domain AEA00_15525 PF02190 ATP-dependent protease La (LON) substrate-binding domain AEA00_15525 PF00004 ATPase family associated with various cellular activities (AAA) AEA00_15530 PF10431 C-terminal, D2-small domain, of ClpB protein AEA00_15530 PF06689 ClpX C4-type zinc finger AEA00_15530 PF07724 AAA domain (Cdc48 subfamily) AEA00_15535 PF00574 Clp protease AEA00_15540 PF05697 Bacterial trigger factor protein (TF) AEA00_15540 PF05698 Bacterial trigger factor protein (TF) C-terminus AEA00_15575 PF00180 Isocitrate/isopropylmalate dehydrogenase AEA00_15585 PF00462 Glutaredoxin AEA00_15590 PF01435 Peptidase family M48 AEA00_15590 PF13181 Tetratricopeptide repeat AEA00_15595 PF00072 Response regulator receiver domain AEA00_15595 PF00486 Transcriptional regulatory protein, C terminal AEA00_15600 PF00512 His Kinase A (phospho-acceptor) domain AEA00_15600 PF00989 PAS fold AEA00_15600 PF11808 Phosphate regulon sensor protein PhoR AEA00_15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_15605 PF13089 Polyphosphate kinase N-terminal domain AEA00_15605 PF17941 Polyphosphate kinase C-terminal domain 1 AEA00_15605 PF13090 Polyphosphate kinase C-terminal domain 2 AEA00_15605 PF02503 Polyphosphate kinase middle domain AEA00_15610 PF02541 Ppx/GppA phosphatase family AEA00_15615 PF13439 Glycosyltransferase Family 4 AEA00_15615 PF00534 Glycosyl transferases group 1 AEA00_15620 PF01569 PAP2 superfamily AEA00_15625 PF00149 Calcineurin-like phosphoesterase AEA00_15640 PF04305 Protein of unknown function (DUF455) AEA00_15645 PF00156 Phosphoribosyl transferase domain AEA00_15660 PF02875 Mur ligase family, glutamate ligase domain AEA00_15660 PF08245 Mur ligase middle domain AEA00_15675 PF00300 Histidine phosphatase superfamily (branch 1) AEA00_15680 PF04185 Phosphoesterase family AEA00_15680 PF05506 Domain of unknown function (DUF756) AEA00_15690 PF00107 Zinc-binding dehydrogenase AEA00_15690 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_15700 PF00005 ABC transporter AEA00_15700 PF12857 TOBE-like domain AEA00_15705 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_15710 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_15720 PF00155 Aminotransferase class I and II AEA00_15730 PF00849 RNA pseudouridylate synthase AEA00_15740 PF05736 OprF membrane domain AEA00_15740 PF00691 OmpA family AEA00_15745 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_15745 PF00107 Zinc-binding dehydrogenase AEA00_15750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEA00_15750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_15775 PF00043 Glutathione S-transferase, C-terminal domain AEA00_15775 PF02798 Glutathione S-transferase, N-terminal domain AEA00_15780 PF00056 lactate/malate dehydrogenase, NAD binding domain AEA00_15780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AEA00_15785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AEA00_15800 PF01425 Amidase AEA00_15810 PF01474 Class-II DAHP synthetase family AEA00_15815 PF02600 Disulfide bond formation protein DsbB AEA00_15820 PF01196 Ribosomal protein L17 AEA00_15825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AEA00_15825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AEA00_15825 PF01000 RNA polymerase Rpb3/RpoA insert domain AEA00_15830 PF00163 Ribosomal protein S4/S9 N-terminal domain AEA00_15830 PF01479 S4 domain AEA00_15835 PF00411 Ribosomal protein S11 AEA00_15840 PF00416 Ribosomal protein S13/S18 AEA00_15845 PF00344 SecY translocase AEA00_15850 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AEA00_15855 PF00327 Ribosomal protein L30p/L7e AEA00_15860 PF00333 Ribosomal protein S5, N-terminal domain AEA00_15860 PF03719 Ribosomal protein S5, C-terminal domain AEA00_15865 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AEA00_15870 PF00347 Ribosomal protein L6 AEA00_15875 PF00410 Ribosomal protein S8 AEA00_15880 PF00253 Ribosomal protein S14p/S29e AEA00_15885 PF00673 ribosomal L5P family C-terminus AEA00_15885 PF00281 Ribosomal protein L5 AEA00_15890 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AEA00_15890 PF00467 KOW motif AEA00_15895 PF00238 Ribosomal protein L14p/L23e AEA00_15900 PF00366 Ribosomal protein S17 AEA00_15905 PF00831 Ribosomal L29 protein AEA00_15910 PF00252 Ribosomal protein L16p/L10e AEA00_15915 PF00189 Ribosomal protein S3, C-terminal domain AEA00_15915 PF07650 KH domain AEA00_15920 PF00237 Ribosomal protein L22p/L17e AEA00_15925 PF00203 Ribosomal protein S19 AEA00_15930 PF03947 Ribosomal Proteins L2, C-terminal domain AEA00_15930 PF00181 Ribosomal Proteins L2, RNA binding domain AEA00_15935 PF00276 Ribosomal protein L23 AEA00_15940 PF00573 Ribosomal protein L4/L1 family AEA00_15945 PF00297 Ribosomal protein L3 AEA00_15950 PF00338 Ribosomal protein S10p/S20e AEA00_15955 PF03144 Elongation factor Tu domain 2 AEA00_15955 PF00009 Elongation factor Tu GTP binding domain AEA00_15955 PF03143 Elongation factor Tu C-terminal domain AEA00_15960 PF14492 Elongation Factor G, domain II AEA00_15960 PF03764 Elongation factor G, domain IV AEA00_15960 PF00009 Elongation factor Tu GTP binding domain AEA00_15960 PF03144 Elongation factor Tu domain 2 AEA00_15960 PF00679 Elongation factor G C-terminus AEA00_15965 PF00177 Ribosomal protein S7p/S5e AEA00_15970 PF00164 Ribosomal protein S12/S23 AEA00_15975 PF00623 RNA polymerase Rpb1, domain 2 AEA00_15975 PF04998 RNA polymerase Rpb1, domain 5 AEA00_15975 PF05000 RNA polymerase Rpb1, domain 4 AEA00_15975 PF04983 RNA polymerase Rpb1, domain 3 AEA00_15975 PF04997 RNA polymerase Rpb1, domain 1 AEA00_15980 PF04565 RNA polymerase Rpb2, domain 3 AEA00_15980 PF04563 RNA polymerase beta subunit AEA00_15980 PF10385 RNA polymerase beta subunit external 1 domain AEA00_15980 PF04560 RNA polymerase Rpb2, domain 7 AEA00_15980 PF04561 RNA polymerase Rpb2, domain 2 AEA00_15980 PF00562 RNA polymerase Rpb2, domain 6 AEA00_15985 PF00542 Ribosomal protein L7/L12 C-terminal domain AEA00_15985 PF16320 Ribosomal protein L7/L12 dimerisation domain AEA00_15990 PF00466 Ribosomal protein L10 AEA00_15995 PF00687 Ribosomal protein L1p/L10e family AEA00_16000 PF03946 Ribosomal protein L11, N-terminal domain AEA00_16000 PF00298 Ribosomal protein L11, RNA binding domain AEA00_16005 PF00467 KOW motif AEA00_16005 PF02357 Transcription termination factor nusG AEA00_16010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AEA00_16020 PF00009 Elongation factor Tu GTP binding domain AEA00_16020 PF03144 Elongation factor Tu domain 2 AEA00_16020 PF03143 Elongation factor Tu C-terminal domain AEA00_16040 PF01926 50S ribosome-binding GTPase AEA00_16040 PF06071 Protein of unknown function (DUF933) AEA00_16045 PF01195 Peptidyl-tRNA hydrolase AEA00_16050 PF01386 Ribosomal L25p family AEA00_16050 PF14693 Ribosomal protein TL5, C-terminal domain AEA00_16055 PF14572 Phosphoribosyl synthetase-associated domain AEA00_16055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AEA00_16065 PF00288 GHMP kinases N terminal domain AEA00_16065 PF08544 GHMP kinases C terminal AEA00_16070 PF03550 Outer membrane lipoprotein LolB AEA00_16080 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AEA00_16080 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AEA00_16080 PF01488 Shikimate / quinate 5-dehydrogenase AEA00_16085 PF03462 PCRF domain AEA00_16085 PF00472 RF-1 domain AEA00_16095 PF00994 Probable molybdopterin binding domain AEA00_16100 PF03976 Polyphosphate kinase 2 (PPK2) AEA00_16110 PF00708 Acylphosphatase AEA00_16115 PF08534 Redoxin AEA00_16120 PF03631 Virulence factor BrkB AEA00_16125 PF03358 NADPH-dependent FMN reductase AEA00_16135 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AEA00_16135 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain AEA00_16145 PF04073 Aminoacyl-tRNA editing domain AEA00_16150 PF04151 Bacterial pre-peptidase C-terminal domain AEA00_16150 PF00082 Subtilase family AEA00_16155 PF04151 Bacterial pre-peptidase C-terminal domain AEA00_16155 PF00082 Subtilase family AEA00_16160 PF04151 Bacterial pre-peptidase C-terminal domain AEA00_16160 PF00082 Subtilase family AEA00_16165 PF01063 Amino-transferase class IV AEA00_16215 PF00881 Nitroreductase family AEA00_16220 PF01612 3'-5' exonuclease AEA00_16220 PF00476 DNA polymerase family A AEA00_16220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AEA00_16220 PF01367 5'-3' exonuclease, C-terminal SAM fold AEA00_16225 PF00293 NUDIX domain AEA00_16235 PF00561 alpha/beta hydrolase fold AEA00_16240 PF05175 Methyltransferase small domain AEA00_16240 PF17827 PrmC N-terminal domain AEA00_16245 PF00578 AhpC/TSA family AEA00_16245 PF10417 C-terminal domain of 1-Cys peroxiredoxin AEA00_16250 PF13192 Thioredoxin domain AEA00_16250 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_16255 PF03466 LysR substrate binding domain AEA00_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_16260 PF14760 Rnk N-terminus AEA00_16260 PF01272 Transcription elongation factor, GreA/GreB, C-term AEA00_16265 PF00923 Transaldolase/Fructose-6-phosphate aldolase AEA00_16275 PF01625 Peptide methionine sulfoxide reductase AEA00_16285 PF00072 Response regulator receiver domain AEA00_16285 PF00196 Bacterial regulatory proteins, luxR family AEA00_16290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AEA00_16290 PF00512 His Kinase A (phospho-acceptor) domain AEA00_16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_16290 PF00072 Response regulator receiver domain AEA00_16290 PF01627 Hpt domain AEA00_16290 PF00672 HAMP domain AEA00_16295 PF00990 Diguanylate cyclase, GGDEF domain AEA00_16295 PF00072 Response regulator receiver domain AEA00_16310 PF00749 tRNA synthetases class I (E and Q), catalytic domain AEA00_16310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AEA00_16315 PF12833 Helix-turn-helix domain AEA00_16315 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AEA00_16320 PF00892 EamA-like transporter family AEA00_16340 PF18125 RlmM ferredoxin-like domain AEA00_16340 PF01728 FtsJ-like methyltransferase AEA00_16345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AEA00_16345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AEA00_16350 PF08450 SMP-30/Gluconolactonase/LRE-like region AEA00_16370 PF00378 Enoyl-CoA hydratase/isomerase AEA00_16380 PF00501 AMP-binding enzyme AEA00_16380 PF13193 AMP-binding enzyme C-terminal domain AEA00_16385 PF03466 LysR substrate binding domain AEA00_16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_16390 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AEA00_16390 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AEA00_16395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AEA00_16400 PF00392 Bacterial regulatory proteins, gntR family AEA00_16400 PF07729 FCD domain AEA00_16420 PF01494 FAD binding domain AEA00_16425 PF01494 FAD binding domain AEA00_16435 PF01923 Cobalamin adenosyltransferase AEA00_16440 PF00850 Histone deacetylase domain AEA00_16445 PF03968 OstA-like protein AEA00_16445 PF04453 LPS transport system D AEA00_16450 PF09312 SurA N-terminal domain AEA00_16450 PF00639 PPIC-type PPIASE domain AEA00_16455 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AEA00_16460 PF00398 Ribosomal RNA adenine dimethylase AEA00_16465 PF04379 ApaG domain AEA00_16470 PF00149 Calcineurin-like phosphoesterase AEA00_16475 PF00186 Dihydrofolate reductase AEA00_16480 PF00303 Thymidylate synthase AEA00_16485 PF01790 Prolipoprotein diacylglyceryl transferase AEA00_16505 PF01219 Prokaryotic diacylglycerol kinase AEA00_16515 PF08521 Two-component sensor kinase N-terminal AEA00_16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_16515 PF00512 His Kinase A (phospho-acceptor) domain AEA00_16520 PF00486 Transcriptional regulatory protein, C terminal AEA00_16520 PF00072 Response regulator receiver domain AEA00_16525 PF13472 GDSL-like Lipase/Acylhydrolase family AEA00_16530 PF00005 ABC transporter AEA00_16540 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AEA00_16550 PF00005 ABC transporter AEA00_16555 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_16575 PF00593 TonB dependent receptor AEA00_16575 PF07715 TonB-dependent Receptor Plug Domain AEA00_16585 PF00248 Aldo/keto reductase family AEA00_16590 PF07662 Na+ dependent nucleoside transporter C-terminus AEA00_16590 PF07670 Nucleoside recognition AEA00_16590 PF01773 Na+ dependent nucleoside transporter N-terminus AEA00_16595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AEA00_16595 PF00294 pfkB family carbohydrate kinase AEA00_16600 PF01207 Dihydrouridine synthase (Dus) AEA00_16610 PF02773 S-adenosylmethionine synthetase, C-terminal domain AEA00_16610 PF00438 S-adenosylmethionine synthetase, N-terminal domain AEA00_16610 PF02772 S-adenosylmethionine synthetase, central domain AEA00_16620 PF00328 Histidine phosphatase superfamily (branch 2) AEA00_16630 PF00691 OmpA family AEA00_16630 PF01389 OmpA-like transmembrane domain AEA00_16650 PF00311 Phosphoenolpyruvate carboxylase AEA00_16660 PF05221 S-adenosyl-L-homocysteine hydrolase AEA00_16660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AEA00_16685 PF00128 Alpha amylase, catalytic domain AEA00_16705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AEA00_16715 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_16715 PF00107 Zinc-binding dehydrogenase AEA00_16715 PF16197 Ketoacyl-synthetase C-terminal extension AEA00_16715 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_16715 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_16715 PF08659 KR domain AEA00_16715 PF00698 Acyl transferase domain AEA00_16715 PF00550 Phosphopantetheine attachment site AEA00_16715 PF14765 Polyketide synthase dehydratase AEA00_16730 PF02219 Methylenetetrahydrofolate reductase AEA00_16745 PF00293 NUDIX domain AEA00_16755 PF07516 SecA Wing and Scaffold domain AEA00_16755 PF01043 SecA preprotein cross-linking domain AEA00_16755 PF07517 SecA DEAD-like domain AEA00_16755 PF02810 SEC-C motif AEA00_16760 PF01551 Peptidase family M23 AEA00_16760 PF08525 Opacity-associated protein A N-terminal motif AEA00_16760 PF01476 LysM domain AEA00_16770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AEA00_16775 PF00091 Tubulin/FtsZ family, GTPase domain AEA00_16775 PF12327 FtsZ family, C-terminal domain AEA00_16780 PF02491 SHS2 domain inserted in FTSA AEA00_16785 PF03799 Cell division protein FtsQ AEA00_16785 PF08478 POTRA domain, FtsQ-type AEA00_16790 PF01820 D-ala D-ala ligase N-terminus AEA00_16790 PF07478 D-ala D-ala ligase C-terminus AEA00_16795 PF02875 Mur ligase family, glutamate ligase domain AEA00_16795 PF01225 Mur ligase family, catalytic domain AEA00_16795 PF08245 Mur ligase middle domain AEA00_16800 PF03033 Glycosyltransferase family 28 N-terminal domain AEA00_16800 PF04101 Glycosyltransferase family 28 C-terminal domain AEA00_16805 PF01098 Cell cycle protein AEA00_16810 PF00953 Glycosyl transferase family 4 AEA00_16815 PF02875 Mur ligase family, glutamate ligase domain AEA00_16815 PF01225 Mur ligase family, catalytic domain AEA00_16815 PF08245 Mur ligase middle domain AEA00_16820 PF02875 Mur ligase family, glutamate ligase domain AEA00_16820 PF01225 Mur ligase family, catalytic domain AEA00_16820 PF08245 Mur ligase middle domain AEA00_16825 PF03717 Penicillin-binding Protein dimerisation domain AEA00_16825 PF00905 Penicillin binding protein transpeptidase domain AEA00_16830 PF04999 Cell division protein FtsL AEA00_16835 PF01795 MraW methylase family AEA00_16840 PF02381 MraZ protein, putative antitoxin-like AEA00_16860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AEA00_16870 PF02021 Uncharacterised protein family UPF0102 AEA00_16875 PF04307 LexA-binding, inner membrane-associated putative hydrolase AEA00_16880 PF02913 FAD linked oxidases, C-terminal domain AEA00_16880 PF01565 FAD binding domain AEA00_16890 PF00072 Response regulator receiver domain AEA00_16890 PF00486 Transcriptional regulatory protein, C terminal AEA00_16895 PF13493 Domain of unknown function (DUF4118) AEA00_16895 PF13492 GAF domain AEA00_16895 PF00512 His Kinase A (phospho-acceptor) domain AEA00_16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_16895 PF02702 Osmosensitive K+ channel His kinase sensor domain AEA00_16900 PF02669 K+-transporting ATPase, c chain AEA00_16910 PF03814 Potassium-transporting ATPase A subunit AEA00_16925 PF00586 AIR synthase related protein, N-terminal domain AEA00_16925 PF02769 AIR synthase related protein, C-terminal domain AEA00_16930 PF01029 NusB family AEA00_16935 PF00885 6,7-dimethyl-8-ribityllumazine synthase AEA00_16940 PF00925 GTP cyclohydrolase II AEA00_16940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AEA00_16945 PF00677 Lumazine binding domain AEA00_16955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AEA00_16955 PF01872 RibD C-terminal domain AEA00_16965 PF03477 ATP cone domain AEA00_16970 PF00464 Serine hydroxymethyltransferase AEA00_16980 PF12848 ABC transporter AEA00_16980 PF00005 ABC transporter AEA00_16985 PF01327 Polypeptide deformylase AEA00_16990 PF03960 ArsC family AEA00_17005 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AEA00_17010 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AEA00_17010 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AEA00_17045 PF07715 TonB-dependent Receptor Plug Domain AEA00_17045 PF00593 TonB dependent receptor AEA00_17055 PF00392 Bacterial regulatory proteins, gntR family AEA00_17055 PF07702 UTRA domain AEA00_17065 PF00263 Bacterial type II and III secretion system protein AEA00_17065 PF03958 Bacterial type II/III secretion system short domain AEA00_17075 PF10741 Type II secretion system (T2SS), protein M subtype b AEA00_17080 PF05137 Fimbrial assembly protein (PilN) AEA00_17085 PF03934 Type II secretion system (T2SS), protein K AEA00_17095 PF07963 Prokaryotic N-terminal methylation motif AEA00_17100 PF12019 Type II transport protein GspH AEA00_17105 PF08334 Type II secretion system (T2SS), protein G AEA00_17110 PF00482 Type II secretion system (T2SS), protein F AEA00_17115 PF00437 Type II/IV secretion system protein AEA00_17115 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AEA00_17120 PF04151 Bacterial pre-peptidase C-terminal domain AEA00_17120 PF00082 Subtilase family AEA00_17125 PF03895 YadA-like membrane anchor domain AEA00_17125 PF13018 Extended Signal Peptide of Type V secretion system AEA00_17125 PF05662 Coiled stalk of trimeric autotransporter adhesin AEA00_17125 PF05658 Head domain of trimeric autotransporter adhesin AEA00_17140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AEA00_17140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AEA00_17140 PF02769 AIR synthase related protein, C-terminal domain AEA00_17145 PF13098 Thioredoxin-like domain AEA00_17145 PF10411 Disulfide bond isomerase protein N-terminus AEA00_17150 PF02899 Phage integrase, N-terminal SAM-like domain AEA00_17150 PF00589 Phage integrase family AEA00_17165 PF03739 Lipopolysaccharide export system permease LptF/LptG AEA00_17175 PF00883 Cytosol aminopeptidase family, catalytic domain AEA00_17175 PF02789 Cytosol aminopeptidase family, N-terminal domain AEA00_17190 PF00133 tRNA synthetases class I (I, L, M and V) AEA00_17190 PF10458 Valyl tRNA synthetase tRNA binding arm AEA00_17190 PF08264 Anticodon-binding domain of tRNA AEA00_17200 PF00544 Pectate lyase AEA00_17205 PF00544 Pectate lyase AEA00_17220 PF01066 CDP-alcohol phosphatidyltransferase AEA00_17230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEA00_17230 PF04073 Aminoacyl-tRNA editing domain AEA00_17230 PF03129 Anticodon binding domain AEA00_17235 PF00816 H-NS histone family AEA00_17245 PF02405 Permease MlaE AEA00_17250 PF00005 ABC transporter AEA00_17255 PF03886 ABC-type transport auxiliary lipoprotein component AEA00_17255 PF02470 MlaD protein AEA00_17275 PF14307 Glycosyltransferase WbsX AEA00_17275 PF05045 Rhamnan synthesis protein F AEA00_17280 PF01144 Coenzyme A transferase AEA00_17285 PF01144 Coenzyme A transferase AEA00_17290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AEA00_17290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AEA00_17290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AEA00_17290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AEA00_17295 PF00483 Nucleotidyl transferase AEA00_17295 PF01050 Mannose-6-phosphate isomerase AEA00_17300 PF04321 RmlD substrate binding domain AEA00_17305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AEA00_17310 PF00483 Nucleotidyl transferase AEA00_17315 PF16363 GDP-mannose 4,6 dehydratase AEA00_17320 PF01012 Electron transfer flavoprotein domain AEA00_17325 PF00766 Electron transfer flavoprotein FAD-binding domain AEA00_17325 PF01012 Electron transfer flavoprotein domain AEA00_17330 PF01050 Mannose-6-phosphate isomerase AEA00_17330 PF00483 Nucleotidyl transferase AEA00_17335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AEA00_17340 PF00535 Glycosyl transferase family 2 AEA00_17365 PF01527 Transposase AEA00_17370 PF13683 Integrase core domain AEA00_17370 PF13276 HTH-like domain AEA00_17380 PF16363 GDP-mannose 4,6 dehydratase AEA00_17385 PF16363 GDP-mannose 4,6 dehydratase AEA00_17400 PF13439 Glycosyltransferase Family 4 AEA00_17400 PF00534 Glycosyl transferases group 1 AEA00_17405 PF13847 Methyltransferase domain AEA00_17405 PF00069 Protein kinase domain AEA00_17410 PF00005 ABC transporter AEA00_17425 PF01053 Cys/Met metabolism PLP-dependent enzyme AEA00_17430 PF00571 CBS domain AEA00_17430 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_17450 PF00437 Type II/IV secretion system protein AEA00_17455 PF02798 Glutathione S-transferase, N-terminal domain AEA00_17455 PF14497 Glutathione S-transferase, C-terminal domain AEA00_17465 PF00271 Helicase conserved C-terminal domain AEA00_17465 PF00270 DEAD/DEAH box helicase AEA00_17470 PF01242 6-pyruvoyl tetrahydropterin synthase AEA00_17485 PF13185 GAF domain AEA00_17495 PF13419 Haloacid dehalogenase-like hydrolase AEA00_17500 PF00817 impB/mucB/samB family AEA00_17500 PF11798 IMS family HHH motif AEA00_17500 PF11799 impB/mucB/samB family C-terminal domain AEA00_17505 PF07977 FabA-like domain AEA00_17510 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_17510 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_17515 PF01432 Peptidase family M3 AEA00_17520 PF00291 Pyridoxal-phosphate dependent enzyme AEA00_17530 PF00394 Multicopper oxidase AEA00_17530 PF07731 Multicopper oxidase AEA00_17530 PF07732 Multicopper oxidase AEA00_17535 PF05275 Copper resistance protein B precursor (CopB) AEA00_17540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEA00_17565 PF01380 SIS domain AEA00_17570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_17575 PF00005 ABC transporter AEA00_17595 PF00158 Sigma-54 interaction domain AEA00_17595 PF00072 Response regulator receiver domain AEA00_17595 PF02954 Bacterial regulatory protein, Fis family AEA00_17605 PF01527 Transposase AEA00_17610 PF13276 HTH-like domain AEA00_17610 PF13683 Integrase core domain AEA00_17620 PF00132 Bacterial transferase hexapeptide (six repeats) AEA00_17620 PF12804 MobA-like NTP transferase domain AEA00_17620 PF14602 Hexapeptide repeat of succinyl-transferase AEA00_17635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AEA00_17635 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AEA00_17640 PF02874 ATP synthase alpha/beta family, beta-barrel domain AEA00_17640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEA00_17645 PF00231 ATP synthase AEA00_17650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEA00_17650 PF00306 ATP synthase alpha/beta chain, C terminal domain AEA00_17650 PF02874 ATP synthase alpha/beta family, beta-barrel domain AEA00_17655 PF00213 ATP synthase delta (OSCP) subunit AEA00_17660 PF00430 ATP synthase B/B' CF(0) AEA00_17665 PF00137 ATP synthase subunit C AEA00_17670 PF00119 ATP synthase A chain AEA00_17685 PF01979 Amidohydrolase family AEA00_17690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AEA00_17690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_17700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AEA00_17700 PF02817 e3 binding domain AEA00_17700 PF00364 Biotin-requiring enzyme AEA00_17735 PF03180 NLPA lipoprotein AEA00_17740 PF00528 Binding-protein-dependent transport system inner membrane component AEA00_17745 PF00005 ABC transporter AEA00_17745 PF09383 NIL domain AEA00_17750 PF00892 EamA-like transporter family AEA00_17755 PF04461 Protein of unknown function (DUF520) AEA00_17780 PF13419 Haloacid dehalogenase-like hydrolase AEA00_17785 PF01479 S4 domain AEA00_17785 PF00849 RNA pseudouridylate synthase AEA00_17790 PF08468 Methyltransferase small domain N-terminal AEA00_17790 PF05175 Methyltransferase small domain AEA00_17800 PF07995 Glucose / Sorbosone dehydrogenase AEA00_17810 PF00512 His Kinase A (phospho-acceptor) domain AEA00_17810 PF00672 HAMP domain AEA00_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_17810 PF00989 PAS fold AEA00_17810 PF18698 Histidine kinase sensor domain AEA00_17830 PF01168 Alanine racemase, N-terminal domain AEA00_17830 PF00842 Alanine racemase, C-terminal domain AEA00_17835 PF01266 FAD dependent oxidoreductase AEA00_17840 PF01037 Lrp/AsnC ligand binding domain AEA00_17850 PF01641 SelR domain AEA00_17860 PF01618 MotA/TolQ/ExbB proton channel family AEA00_17865 PF13677 Membrane MotB of proton-channel complex MotA/MotB AEA00_17865 PF00691 OmpA family AEA00_17890 PF01061 ABC-2 type transporter AEA00_17895 PF00005 ABC transporter AEA00_17900 PF00999 Sodium/hydrogen exchanger family AEA00_17905 PF03795 YCII-related domain AEA00_17910 PF02469 Fasciclin domain AEA00_17915 PF03167 Uracil DNA glycosylase superfamily AEA00_17925 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AEA00_17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_17930 PF03466 LysR substrate binding domain AEA00_17935 PF03358 NADPH-dependent FMN reductase AEA00_17940 PF00248 Aldo/keto reductase family AEA00_17950 PF01431 Peptidase family M13 AEA00_17950 PF05649 Peptidase family M13 AEA00_17965 PF13520 Amino acid permease AEA00_17975 PF04397 LytTr DNA-binding domain AEA00_17975 PF00072 Response regulator receiver domain AEA00_17980 PF00672 HAMP domain AEA00_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_17980 PF06580 Histidine kinase AEA00_17980 PF02743 Cache domain AEA00_17995 PF00857 Isochorismatase family AEA00_18000 PF05974 Domain of unknown function (DUF892) AEA00_18005 PF05974 Domain of unknown function (DUF892) AEA00_18010 PF05067 Manganese containing catalase AEA00_18025 PF08448 PAS fold AEA00_18025 PF03705 CheR methyltransferase, all-alpha domain AEA00_18025 PF01739 CheR methyltransferase, SAM binding domain AEA00_18025 PF01339 CheB methylesterase AEA00_18040 PF00072 Response regulator receiver domain AEA00_18040 PF02954 Bacterial regulatory protein, Fis family AEA00_18040 PF00158 Sigma-54 interaction domain AEA00_18050 PF01654 Cytochrome bd terminal oxidase subunit I AEA00_18055 PF02322 Cytochrome bd terminal oxidase subunit II AEA00_18075 PF16363 GDP-mannose 4,6 dehydratase AEA00_18085 PF03275 UDP-galactopyranose mutase AEA00_18095 PF00005 ABC transporter AEA00_18095 PF00664 ABC transporter transmembrane region AEA00_18110 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_18110 PF13823 Alcohol dehydrogenase GroES-associated AEA00_18110 PF00107 Zinc-binding dehydrogenase AEA00_18135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AEA00_18135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AEA00_18160 PF07715 TonB-dependent Receptor Plug Domain AEA00_18160 PF00593 TonB dependent receptor AEA00_18175 PF00005 ABC transporter AEA00_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_18185 PF03466 LysR substrate binding domain AEA00_18190 PF01042 Endoribonuclease L-PSP AEA00_18210 PF00248 Aldo/keto reductase family AEA00_18215 PF03466 LysR substrate binding domain AEA00_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_18235 PF00990 Diguanylate cyclase, GGDEF domain AEA00_18235 PF00360 Phytochrome region AEA00_18235 PF01590 GAF domain AEA00_18235 PF00563 EAL domain AEA00_18250 PF13276 HTH-like domain AEA00_18250 PF13333 Integrase core domain AEA00_18250 PF00665 Integrase core domain AEA00_18265 PF04546 Sigma-70, non-essential region AEA00_18265 PF04542 Sigma-70 region 2 AEA00_18265 PF04545 Sigma-70, region 4 AEA00_18265 PF00140 Sigma-70 factor, region 1.2 AEA00_18265 PF04539 Sigma-70 region 3 AEA00_18265 PF03979 Sigma-70 factor, region 1.1 AEA00_18270 PF02580 D-Tyr-tRNA(Tyr) deacylase AEA00_18275 PF03279 Bacterial lipid A biosynthesis acyltransferase AEA00_18285 PF00925 GTP cyclohydrolase II AEA00_18305 PF00535 Glycosyl transferase family 2 AEA00_18320 PF01029 NusB family AEA00_18320 PF01189 16S rRNA methyltransferase RsmB/F AEA00_18325 PF02911 Formyl transferase, C-terminal domain AEA00_18325 PF00551 Formyl transferase AEA00_18330 PF01327 Polypeptide deformylase AEA00_18335 PF01476 LysM domain AEA00_18340 PF17782 DprA winged helix domain AEA00_18340 PF02481 DNA recombination-mediator protein A AEA00_18345 PF04361 Protein of unknown function (DUF494) AEA00_18350 PF07963 Prokaryotic N-terminal methylation motif AEA00_18350 PF00114 Pilin (bacterial filament) AEA00_18360 PF01751 Toprim domain AEA00_18360 PF13368 Topoisomerase C-terminal repeat AEA00_18360 PF01131 DNA topoisomerase AEA00_18365 PF01300 Telomere recombination AEA00_18380 PF00360 Phytochrome region AEA00_18380 PF00990 Diguanylate cyclase, GGDEF domain AEA00_18380 PF01590 GAF domain AEA00_18380 PF00563 EAL domain AEA00_18395 PF01343 Peptidase family S49 AEA00_18400 PF01554 MatE AEA00_18435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_18440 PF03458 UPF0126 domain AEA00_18445 PF04542 Sigma-70 region 2 AEA00_18445 PF04545 Sigma-70, region 4 AEA00_18450 PF03167 Uracil DNA glycosylase superfamily AEA00_18455 PF00072 Response regulator receiver domain AEA00_18455 PF01339 CheB methylesterase AEA00_18460 PF18075 FtsX extracellular domain AEA00_18465 PF00005 ABC transporter AEA00_18470 PF00270 DEAD/DEAH box helicase AEA00_18470 PF12300 ATP-dependent RNA helicase RhlB AEA00_18470 PF00271 Helicase conserved C-terminal domain AEA00_18475 PF00085 Thioredoxin AEA00_18480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEA00_18480 PF07497 Rho termination factor, RNA-binding domain AEA00_18480 PF07498 Rho termination factor, N-terminal domain AEA00_18490 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AEA00_18495 PF03466 LysR substrate binding domain AEA00_18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_18505 PF03971 Monomeric isocitrate dehydrogenase AEA00_18520 PF14489 QueF-like protein AEA00_18520 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AEA00_18530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_18535 PF00873 AcrB/AcrD/AcrF family AEA00_18540 PF00873 AcrB/AcrD/AcrF family AEA00_18560 PF08281 Sigma-70, region 4 AEA00_18560 PF04542 Sigma-70 region 2 AEA00_18565 PF07063 Domain of unknown function (DUF1338) AEA00_18605 PF01427 D-ala-D-ala dipeptidase AEA00_18610 PF01471 Putative peptidoglycan binding domain AEA00_18625 PF01510 N-acetylmuramoyl-L-alanine amidase AEA00_18635 PF13378 Enolase C-terminal domain-like AEA00_18635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEA00_18645 PF13520 Amino acid permease AEA00_18660 PF05360 yiaA/B two helix domain AEA00_18665 PF07995 Glucose / Sorbosone dehydrogenase AEA00_18670 PF14310 Fibronectin type III-like domain AEA00_18670 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_18670 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_18675 PF02152 Dihydroneopterin aldolase AEA00_18680 PF00814 Glycoprotease family AEA00_18685 PF01165 Ribosomal protein S21 AEA00_18690 PF09424 Yqey-like protein AEA00_18695 PF03631 Virulence factor BrkB AEA00_18700 PF08278 DNA primase DnaG DnaB-binding AEA00_18700 PF10410 DnaB-helicase binding domain of primase AEA00_18700 PF08275 DNA primase catalytic core, N-terminal domain AEA00_18700 PF01807 CHC2 zinc finger AEA00_18710 PF13593 SBF-like CPA transporter family (DUF4137) AEA00_18715 PF02683 Cytochrome C biogenesis protein transmembrane region AEA00_18715 PF11412 Disulphide bond corrector protein DsbC AEA00_18720 PF01040 UbiA prenyltransferase family AEA00_18745 PF00510 Cytochrome c oxidase subunit III AEA00_18750 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AEA00_18760 PF00115 Cytochrome C and Quinol oxidase polypeptide I AEA00_18765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AEA00_18765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AEA00_18775 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AEA00_18775 PF00171 Aldehyde dehydrogenase family AEA00_18775 PF14850 DNA-binding domain of Proline dehydrogenase AEA00_18775 PF01619 Proline dehydrogenase AEA00_18810 PF13276 HTH-like domain AEA00_18810 PF13683 Integrase core domain AEA00_18815 PF01527 Transposase AEA00_18825 PF13276 HTH-like domain AEA00_18825 PF13683 Integrase core domain AEA00_18830 PF01527 Transposase AEA00_18840 PF13276 HTH-like domain AEA00_18840 PF00665 Integrase core domain AEA00_18840 PF13333 Integrase core domain AEA00_18845 PF01527 Transposase AEA00_18855 PF01609 Transposase DDE domain AEA00_18855 PF05598 Transposase domain (DUF772) AEA00_18860 PF05598 Transposase domain (DUF772) AEA00_18890 PF00579 tRNA synthetases class I (W and Y) AEA00_18895 PF01551 Peptidase family M23 AEA00_18895 PF04225 Opacity-associated protein A LysM-like domain AEA00_18900 PF03702 Anhydro-N-acetylmuramic acid kinase AEA00_18910 PF07690 Major Facilitator Superfamily AEA00_18915 PF03372 Endonuclease/Exonuclease/phosphatase family AEA00_18920 PF00156 Phosphoribosyl transferase domain AEA00_18930 PF13614 AAA domain AEA00_18935 PF02195 ParB-like nuclease domain AEA00_18935 PF17762 HTH domain found in ParB protein AEA00_18950 PF01370 NAD dependent epimerase/dehydratase family AEA00_18955 PF00535 Glycosyl transferase family 2 AEA00_18970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AEA00_18970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AEA00_18970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AEA00_18970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AEA00_18975 PF00692 dUTPase AEA00_18980 PF02441 Flavoprotein AEA00_18980 PF04127 DNA / pantothenate metabolism flavoprotein AEA00_18985 PF04002 RadC-like JAB domain AEA00_18990 PF00750 tRNA synthetases class I (R) AEA00_18990 PF05746 DALR anticodon binding domain AEA00_18990 PF03485 Arginyl tRNA synthetase N terminal domain AEA00_19005 PF00106 short chain dehydrogenase AEA00_19010 PF01757 Acyltransferase family AEA00_19020 PF03033 Glycosyltransferase family 28 N-terminal domain AEA00_19030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AEA00_19030 PF17810 Arginine decarboxylase helical bundle domain AEA00_19030 PF17944 Arginine decarboxylase C-terminal helical extension AEA00_19035 PF17284 Spermidine synthase tetramerisation domain AEA00_19050 PF00543 Nitrogen regulatory protein P-II AEA00_19055 PF04380 Membrane fusogenic activity AEA00_19075 PF00563 EAL domain AEA00_19075 PF12792 CSS motif domain associated with EAL AEA00_19080 PF00487 Fatty acid desaturase AEA00_19085 PF00970 Oxidoreductase FAD-binding domain AEA00_19085 PF00175 Oxidoreductase NAD-binding domain AEA00_19085 PF00111 2Fe-2S iron-sulfur cluster binding domain AEA00_19090 PF00440 Bacterial regulatory proteins, tetR family AEA00_19110 PF01139 tRNA-splicing ligase RtcB AEA00_19150 PF01370 NAD dependent epimerase/dehydratase family AEA00_19150 PF08338 Domain of unknown function (DUF1731) AEA00_19155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEA00_19155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AEA00_19165 PF00486 Transcriptional regulatory protein, C terminal AEA00_19165 PF00072 Response regulator receiver domain AEA00_19170 PF00512 His Kinase A (phospho-acceptor) domain AEA00_19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_19170 PF08521 Two-component sensor kinase N-terminal AEA00_19190 PF00595 PDZ domain AEA00_19210 PF01594 AI-2E family transporter AEA00_19215 PF13419 Haloacid dehalogenase-like hydrolase AEA00_19220 PF02789 Cytosol aminopeptidase family, N-terminal domain AEA00_19220 PF00883 Cytosol aminopeptidase family, catalytic domain AEA00_19240 PF00196 Bacterial regulatory proteins, luxR family AEA00_19240 PF00072 Response regulator receiver domain AEA00_19250 PF13533 Biotin-lipoyl like AEA00_19255 PF00005 ABC transporter AEA00_19275 PF00892 EamA-like transporter family AEA00_19280 PF00892 EamA-like transporter family AEA00_19305 PF00753 Metallo-beta-lactamase superfamily AEA00_19310 PF00579 tRNA synthetases class I (W and Y) AEA00_19315 PF05532 CsbD-like AEA00_19330 PF00491 Arginase family AEA00_19355 PF02223 Thymidylate kinase AEA00_19360 PF02311 AraC-like ligand binding domain AEA00_19360 PF12833 Helix-turn-helix domain AEA00_19385 PF03309 Type III pantothenate kinase AEA00_19390 PF02237 Biotin protein ligase C terminal domain AEA00_19390 PF03099 Biotin/lipoate A/B protein ligase family AEA00_19390 PF08279 HTH domain AEA00_19400 PF06167 Glucose-regulated metallo-peptidase M90 AEA00_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_19415 PF00672 HAMP domain AEA00_19415 PF00512 His Kinase A (phospho-acceptor) domain AEA00_19420 PF00072 Response regulator receiver domain AEA00_19420 PF00486 Transcriptional regulatory protein, C terminal AEA00_19430 PF01207 Dihydrouridine synthase (Dus) AEA00_19450 PF00199 Catalase AEA00_19450 PF06628 Catalase-related immune-responsive AEA00_19455 PF13307 Helicase C-terminal domain AEA00_19455 PF06733 DEAD_2 AEA00_19470 PF08501 Shikimate dehydrogenase substrate binding domain AEA00_19470 PF01488 Shikimate / quinate 5-dehydrogenase AEA00_19470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AEA00_19480 PF00175 Oxidoreductase NAD-binding domain AEA00_19480 PF00258 Flavodoxin AEA00_19480 PF00667 FAD binding domain AEA00_19485 PF00490 Delta-aminolevulinic acid dehydratase AEA00_19505 PF00326 Prolyl oligopeptidase family AEA00_19505 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AEA00_19510 PF02798 Glutathione S-transferase, N-terminal domain AEA00_19510 PF00043 Glutathione S-transferase, C-terminal domain AEA00_19545 PF00005 ABC transporter AEA00_19555 PF01381 Helix-turn-helix AEA00_19565 PF02583 Metal-sensitive transcriptional repressor AEA00_19570 PF01545 Cation efflux family AEA00_19575 PF01229 Glycosyl hydrolases family 39 AEA00_19580 PF01383 CpcD/allophycocyanin linker domain AEA00_19580 PF00175 Oxidoreductase NAD-binding domain AEA00_19585 PF00005 ABC transporter AEA00_19590 PF01061 ABC-2 type transporter AEA00_19600 PF08546 Ketopantoate reductase PanE/ApbA C terminal AEA00_19600 PF02558 Ketopantoate reductase PanE/ApbA AEA00_19610 PF03061 Thioesterase superfamily AEA00_19615 PF00268 Ribonucleotide reductase, small chain AEA00_19620 PF00317 Ribonucleotide reductase, all-alpha domain AEA00_19620 PF02867 Ribonucleotide reductase, barrel domain AEA00_19620 PF03477 ATP cone domain AEA00_19630 PF00583 Acetyltransferase (GNAT) family AEA00_19630 PF13380 CoA binding domain AEA00_19630 PF13607 Succinyl-CoA ligase like flavodoxin domain AEA00_19635 PF01769 Divalent cation transporter AEA00_19635 PF00571 CBS domain AEA00_19635 PF03448 MgtE intracellular N domain AEA00_19640 PF00194 Eukaryotic-type carbonic anhydrase AEA00_19645 PF02254 TrkA-N domain AEA00_19645 PF00999 Sodium/hydrogen exchanger family AEA00_19650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AEA00_19650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AEA00_19655 PF00723 Glycosyl hydrolases family 15 AEA00_19660 PF01451 Low molecular weight phosphotyrosine protein phosphatase AEA00_19670 PF05166 YcgL domain AEA00_19675 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_19675 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_19685 PF00535 Glycosyl transferase family 2 AEA00_19690 PF04820 Tryptophan halogenase AEA00_19730 PF07977 FabA-like domain AEA00_19745 PF00550 Phosphopantetheine attachment site AEA00_19750 PF04820 Tryptophan halogenase AEA00_19780 PF01218 Coproporphyrinogen III oxidase AEA00_19785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AEA00_19785 PF01612 3'-5' exonuclease AEA00_19785 PF01367 5'-3' exonuclease, C-terminal SAM fold AEA00_19785 PF00476 DNA polymerase family A AEA00_19810 PF12464 Maltose acetyltransferase AEA00_19810 PF14602 Hexapeptide repeat of succinyl-transferase AEA00_19820 PF00580 UvrD/REP helicase N-terminal domain AEA00_19820 PF13361 UvrD-like helicase C-terminal domain AEA00_19830 PF13396 Phospholipase_D-nuclease N-terminal AEA00_19830 PF13091 PLD-like domain AEA00_19835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_19835 PF03466 LysR substrate binding domain AEA00_19840 PF03737 Aldolase/RraA AEA00_19845 PF04303 PrpF protein AEA00_19850 PF04909 Amidohydrolase AEA00_19855 PF00471 Ribosomal protein L33 AEA00_19860 PF00830 Ribosomal L28 family AEA00_19870 PF00873 AcrB/AcrD/AcrF family AEA00_19880 PF00529 HlyD membrane-fusion protein of T1SS AEA00_19880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_19900 PF02527 rRNA small subunit methyltransferase G AEA00_19905 PF09423 PhoD-like phosphatase AEA00_19905 PF16655 PhoD-like phosphatase, N-terminal domain AEA00_19910 PF01648 4'-phosphopantetheinyl transferase superfamily AEA00_19915 PF04226 Transglycosylase associated protein AEA00_19960 PF00480 ROK family AEA00_19970 PF00639 PPIC-type PPIASE domain AEA00_19970 PF09312 SurA N-terminal domain AEA00_19980 PF00474 Sodium:solute symporter family AEA00_19985 PF04341 Protein of unknown function, DUF485 AEA00_19995 PF00501 AMP-binding enzyme AEA00_19995 PF16177 Acetyl-coenzyme A synthetase N-terminus AEA00_19995 PF13193 AMP-binding enzyme C-terminal domain AEA00_20000 PF00072 Response regulator receiver domain AEA00_20000 PF00196 Bacterial regulatory proteins, luxR family AEA00_20025 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AEA00_20025 PF04616 Glycosyl hydrolases family 43 AEA00_20030 PF00248 Aldo/keto reductase family AEA00_20045 PF01557 Fumarylacetoacetate (FAA) hydrolase family AEA00_20050 PF13378 Enolase C-terminal domain-like AEA00_20050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEA00_20055 PF05336 L-rhamnose mutarotase AEA00_20060 PF07690 Major Facilitator Superfamily AEA00_20065 PF01614 Bacterial transcriptional regulator AEA00_20065 PF09339 IclR helix-turn-helix domain AEA00_20080 PF02659 Putative manganese efflux pump AEA00_20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_20085 PF00512 His Kinase A (phospho-acceptor) domain AEA00_20085 PF09456 RcsC Alpha-Beta-Loop (ABL) AEA00_20085 PF00072 Response regulator receiver domain AEA00_20090 PF06165 Glycosyltransferase family 36 AEA00_20090 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AEA00_20105 PF13570 PQQ-like domain AEA00_20105 PF01011 PQQ enzyme repeat AEA00_20105 PF13360 PQQ-like domain AEA00_20125 PF04357 TamB, inner membrane protein subunit of TAM complex AEA00_20130 PF01103 Surface antigen AEA00_20130 PF17243 POTRA domain TamA domain 1 AEA00_20135 PF05746 DALR anticodon binding domain AEA00_20135 PF02092 Glycyl-tRNA synthetase beta subunit AEA00_20140 PF02091 Glycyl-tRNA synthetase alpha subunit AEA00_20145 PF00437 Type II/IV secretion system protein AEA00_20150 PF00117 Glutamine amidotransferase class-I AEA00_20150 PF00958 GMP synthase C terminal domain AEA00_20160 PF00902 Sec-independent protein translocase protein (TatC) AEA00_20165 PF02416 mttA/Hcf106 family AEA00_20170 PF02416 mttA/Hcf106 family AEA00_20180 PF00762 Ferrochelatase AEA00_20185 PF12697 Alpha/beta hydrolase family AEA00_20200 PF04381 Putative exonuclease, RdgC AEA00_20205 PF01171 PP-loop family AEA00_20215 PF00356 Bacterial regulatory proteins, lacI family AEA00_20220 PF07488 Glycosyl hydrolase family 67 middle domain AEA00_20220 PF07477 Glycosyl hydrolase family 67 C-terminus AEA00_20220 PF03648 Glycosyl hydrolase family 67 N-terminus AEA00_20230 PF13378 Enolase C-terminal domain-like AEA00_20230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEA00_20235 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AEA00_20235 PF04616 Glycosyl hydrolases family 43 AEA00_20240 PF00933 Glycosyl hydrolase family 3 N terminal domain AEA00_20240 PF01915 Glycosyl hydrolase family 3 C-terminal domain AEA00_20240 PF07691 PA14 domain AEA00_20240 PF14310 Fibronectin type III-like domain AEA00_20245 PF08125 Mannitol dehydrogenase C-terminal domain AEA00_20245 PF01232 Mannitol dehydrogenase Rossmann domain AEA00_20285 PF08450 SMP-30/Gluconolactonase/LRE-like region AEA00_20295 PF00331 Glycosyl hydrolase family 10 AEA00_20300 PF16355 Domain of unknown function (DUF4982) AEA00_20300 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AEA00_20300 PF00703 Glycosyl hydrolases family 2 AEA00_20300 PF02837 Glycosyl hydrolases family 2, sugar binding domain AEA00_20300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AEA00_20305 PF02614 Glucuronate isomerase AEA00_20310 PF00553 Cellulose binding domain AEA00_20310 PF03422 Carbohydrate binding module (family 6) AEA00_20310 PF00331 Glycosyl hydrolase family 10 AEA00_20330 PF04616 Glycosyl hydrolases family 43 AEA00_20355 PF00107 Zinc-binding dehydrogenase AEA00_20355 PF14765 Polyketide synthase dehydratase AEA00_20355 PF00550 Phosphopantetheine attachment site AEA00_20355 PF00698 Acyl transferase domain AEA00_20355 PF08659 KR domain AEA00_20355 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_20355 PF02801 Beta-ketoacyl synthase, C-terminal domain AEA00_20355 PF00109 Beta-ketoacyl synthase, N-terminal domain AEA00_20355 PF16197 Ketoacyl-synthetase C-terminal extension AEA00_20370 PF00356 Bacterial regulatory proteins, lacI family AEA00_20385 PF04820 Tryptophan halogenase AEA00_20390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AEA00_20395 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AEA00_20400 PF04337 Protein of unknown function, DUF480 AEA00_20410 PF13302 Acetyltransferase (GNAT) domain AEA00_20415 PF13361 UvrD-like helicase C-terminal domain AEA00_20415 PF00580 UvrD/REP helicase N-terminal domain AEA00_20420 PF01527 Transposase AEA00_20430 PF00265 Thymidine kinase AEA00_20435 PF01590 GAF domain AEA00_20435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEA00_20435 PF00360 Phytochrome region AEA00_20435 PF00512 His Kinase A (phospho-acceptor) domain AEA00_20435 PF08446 PAS fold AEA00_20440 PF04349 Periplasmic glucan biosynthesis protein, MdoG AEA00_20450 PF06827 Zinc finger found in FPG and IleRS AEA00_20450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AEA00_20450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AEA00_20480 PF03594 Benzoate membrane transport protein AEA00_20485 PF08446 PAS fold AEA00_20485 PF01590 GAF domain AEA00_20485 PF13426 PAS domain AEA00_20485 PF00360 Phytochrome region AEA00_20490 PF01126 Heme oxygenase AEA00_20500 PF01263 Aldose 1-epimerase AEA00_20510 PF02810 SEC-C motif AEA00_20520 PF01925 Sulfite exporter TauE/SafE AEA00_20525 PF00593 TonB dependent receptor AEA00_20525 PF07715 TonB-dependent Receptor Plug Domain AEA00_20545 PF01227 GTP cyclohydrolase I AEA00_20555 PF07869 Protein of unknown function (DUF1656) AEA00_20560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AEA00_20560 PF00529 HlyD membrane-fusion protein of T1SS AEA00_20565 PF02321 Outer membrane efflux protein AEA00_20570 PF04632 Fusaric acid resistance protein family AEA00_20575 PF00083 Sugar (and other) transporter AEA00_20585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_20585 PF03466 LysR substrate binding domain AEA00_20590 PF00106 short chain dehydrogenase AEA00_20595 PF13091 PLD-like domain AEA00_20595 PF13396 Phospholipase_D-nuclease N-terminal AEA00_20670 PF00849 RNA pseudouridylate synthase AEA00_20705 PF13538 UvrD-like helicase C-terminal domain AEA00_20710 PF12705 PD-(D/E)XK nuclease superfamily AEA00_20710 PF00580 UvrD/REP helicase N-terminal domain AEA00_20710 PF13361 UvrD-like helicase C-terminal domain AEA00_20715 PF17946 RecC C-terminal domain AEA00_20750 PF00005 ABC transporter AEA00_20755 PF02405 Permease MlaE AEA00_20760 PF02470 MlaD protein AEA00_20765 PF05494 MlaC protein AEA00_20775 PF04333 MlaA lipoprotein AEA00_20780 PF00255 Glutathione peroxidase AEA00_20795 PF02646 RmuC family AEA00_20800 PF00107 Zinc-binding dehydrogenase AEA00_20800 PF08240 Alcohol dehydrogenase GroES-like domain AEA00_20805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEA00_20805 PF03466 LysR substrate binding domain AEA00_20820 PF13520 Amino acid permease AEA00_20830 PF00593 TonB dependent receptor AEA00_20830 PF07715 TonB-dependent Receptor Plug Domain AEA00_20835 PF10947 Protein of unknown function (DUF2628) AEA00_20840 PF17155 Gammaproteobacterial periplasmic sensor domain AEA00_20840 PF00990 Diguanylate cyclase, GGDEF domain AEA00_20845 PF13556 PucR C-terminal helix-turn-helix domain AEA00_20845 PF05651 Putative sugar diacid recognition AEA00_20845 PF17853 GGDEF-like domain AEA00_20850 PF02595 Glycerate kinase family AEA00_20855 PF07690 Major Facilitator Superfamily AEA00_20875 PF10672 S-adenosylmethionine-dependent methyltransferase AEA00_20875 PF17785 PUA-like domain AEA00_20880 PF03741 Integral membrane protein TerC family AEA00_20885 PF01694 Rhomboid family AEA00_20895 PF03009 Glycerophosphoryl diester phosphodiesterase family AEA00_20905 PF01569 PAP2 superfamily AEA00_20910 PF00593 TonB dependent receptor AEA00_20915 PF10396 GTP-binding protein TrmE N-terminus AEA00_20915 PF12631 MnmE helical domain AEA00_20915 PF01926 50S ribosome-binding GTPase AEA00_20920 PF01522 Polysaccharide deacetylase AEA00_20925 PF14849 YidC periplasmic domain AEA00_20925 PF02096 60Kd inner membrane protein AEA00_20930 PF00825 Ribonuclease P AEA00_20935 PF00468 Ribosomal protein L34