locus-tag class description OF401_00005 PF00308 Bacterial dnaA protein OF401_00005 PF08299 Bacterial dnaA protein helix-turn-helix OF401_00005 PF11638 DnaA N-terminal domain OF401_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain OF401_00010 PF02767 DNA polymerase III beta subunit, central domain OF401_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain OF401_00015 PF02463 RecF/RecN/SMC N terminal domain OF401_00020 PF00204 DNA gyrase B OF401_00020 PF00986 DNA gyrase B subunit, carboxyl terminus OF401_00020 PF18053 DNA gyrase B subunit insert domain OF401_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_00020 PF01751 Toprim domain OF401_00030 PF01435 Peptidase family M48 OF401_00040 PF03544 Gram-negative bacterial TonB protein C-terminal OF401_00045 PF01618 MotA/TolQ/ExbB proton channel family OF401_00050 PF02472 Biopolymer transport protein ExbD/TolR OF401_00055 PF02472 Biopolymer transport protein ExbD/TolR OF401_00060 PF02472 Biopolymer transport protein ExbD/TolR OF401_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OF401_00075 PF13091 PLD-like domain OF401_00075 PF13396 Phospholipase_D-nuclease N-terminal OF401_00080 PF04055 Radical SAM superfamily OF401_00090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) OF401_00105 PF01842 ACT domain OF401_00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OF401_00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OF401_00110 PF13180 PDZ domain OF401_00110 PF03572 Peptidase family S41 OF401_00115 PF01551 Peptidase family M23 OF401_00125 PF04389 Peptidase family M28 OF401_00140 PF00150 Cellulase (glycosyl hydrolase family 5) OF401_00145 PF00150 Cellulase (glycosyl hydrolase family 5) OF401_00150 PF05598 Transposase domain (DUF772) OF401_00150 PF01609 Transposase DDE domain OF401_00155 PF00150 Cellulase (glycosyl hydrolase family 5) OF401_00160 PF08240 Alcohol dehydrogenase GroES-like domain OF401_00160 PF00107 Zinc-binding dehydrogenase OF401_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_00175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OF401_00180 PF04898 Glutamate synthase central domain OF401_00180 PF01645 Conserved region in glutamate synthase OF401_00180 PF01493 GXGXG motif OF401_00180 PF00310 Glutamine amidotransferases class-II OF401_00195 PF00398 Ribosomal RNA adenine dimethylase OF401_00205 PF02678 Pirin OF401_00205 PF05726 Pirin C-terminal cupin domain OF401_00210 PF02525 Flavodoxin-like fold OF401_00215 PF03466 LysR substrate binding domain OF401_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_00230 PF03466 LysR substrate binding domain OF401_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_00290 PF09369 Domain of unknown function (DUF1998) OF401_00290 PF00270 DEAD/DEAH box helicase OF401_00290 PF00271 Helicase conserved C-terminal domain OF401_00295 PF03006 Haemolysin-III related OF401_00315 PF02525 Flavodoxin-like fold OF401_00325 PF01638 HxlR-like helix-turn-helix OF401_00340 PF13176 Tetratricopeptide repeat OF401_00340 PF00931 NB-ARC domain OF401_00375 PF01872 RibD C-terminal domain OF401_00380 PF05532 CsbD-like OF401_00385 PF00072 Response regulator receiver domain OF401_00385 PF00196 Bacterial regulatory proteins, luxR family OF401_00425 PF02868 Thermolysin metallopeptidase, alpha-helical domain OF401_00425 PF01447 Thermolysin metallopeptidase, catalytic domain OF401_00425 PF16485 Protealysin propeptide OF401_00435 PF13344 Haloacid dehalogenase-like hydrolase OF401_00435 PF00293 NUDIX domain OF401_00440 PF01594 AI-2E family transporter OF401_00445 PF07859 alpha/beta hydrolase fold OF401_00455 PF00085 Thioredoxin OF401_00460 PF08946 Osmosensory transporter coiled coil OF401_00460 PF00083 Sugar (and other) transporter OF401_00500 PF17863 AAA lid domain OF401_00500 PF07726 ATPase family associated with various cellular activities (AAA) OF401_00530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OF401_00535 PF00155 Aminotransferase class I and II OF401_00540 PF07715 TonB-dependent Receptor Plug Domain OF401_00540 PF00593 TonB dependent receptor OF401_00555 PF00171 Aldehyde dehydrogenase family OF401_00585 PF02735 Ku70/Ku80 beta-barrel domain OF401_00590 PF04679 ATP dependent DNA ligase C terminal region OF401_00590 PF01068 ATP dependent DNA ligase domain OF401_00590 PF13298 DNA polymerase Ligase (LigD) OF401_00595 PF01070 FMN-dependent dehydrogenase OF401_00620 PF18500 CadC C-terminal domain 1 OF401_00620 PF00486 Transcriptional regulatory protein, C terminal OF401_00625 PF12241 Trans-2-enoyl-CoA reductase catalytic region OF401_00625 PF07055 Enoyl reductase FAD binding domain OF401_00625 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase OF401_00640 PF00294 pfkB family carbohydrate kinase OF401_00655 PF01095 Pectinesterase OF401_00710 PF05598 Transposase domain (DUF772) OF401_00750 PF11896 Domain of unknown function (DUF3416) OF401_00750 PF00128 Alpha amylase, catalytic domain OF401_00755 PF00128 Alpha amylase, catalytic domain OF401_00755 PF16657 Maltogenic Amylase, C-terminal domain OF401_00760 PF00128 Alpha amylase, catalytic domain OF401_00760 PF02806 Alpha amylase, C-terminal all-beta domain OF401_00760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OF401_00800 PF00248 Aldo/keto reductase family OF401_00805 PF13472 GDSL-like Lipase/Acylhydrolase family OF401_00810 PF00135 Carboxylesterase family OF401_00815 PF13472 GDSL-like Lipase/Acylhydrolase family OF401_00815 PF07859 alpha/beta hydrolase fold OF401_00825 PF03480 Bacterial extracellular solute-binding protein, family 7 OF401_00835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component OF401_00840 PF04616 Glycosyl hydrolases family 43 OF401_00840 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OF401_00845 PF00356 Bacterial regulatory proteins, lacI family OF401_00850 PF04962 KduI/IolB family OF401_00865 PF00657 GDSL-like Lipase/Acylhydrolase OF401_00875 PF00351 Biopterin-dependent aromatic amino acid hydroxylase OF401_00880 PF01037 Lrp/AsnC ligand binding domain OF401_00885 PF07660 Secretin and TonB N terminus short domain OF401_00885 PF00593 TonB dependent receptor OF401_00885 PF07715 TonB-dependent Receptor Plug Domain OF401_00890 PF01734 Patatin-like phospholipase OF401_00900 PF00005 ABC transporter OF401_00915 PF00005 ABC transporter OF401_00915 PF00571 CBS domain OF401_00920 PF00528 Binding-protein-dependent transport system inner membrane component OF401_00930 PF12867 DinB superfamily OF401_00930 PF03781 Sulfatase-modifying factor enzyme 1 OF401_00935 PF10017 Histidine-specific methyltransferase, SAM-dependent OF401_00965 PF10609 NUBPL iron-transfer P-loop NTPase OF401_00965 PF01883 Iron-sulfur cluster assembly protein OF401_00970 PF00300 Histidine phosphatase superfamily (branch 1) OF401_00975 PF04264 YceI-like domain OF401_00980 PF13091 PLD-like domain OF401_00985 PF03061 Thioesterase superfamily OF401_01005 PF01161 Phosphatidylethanolamine-binding protein OF401_01015 PF02673 Bacitracin resistance protein BacA OF401_01020 PF00120 Glutamine synthetase, catalytic domain OF401_01020 PF03951 Glutamine synthetase, beta-Grasp domain OF401_01025 PF00543 Nitrogen regulatory protein P-II OF401_01030 PF00909 Ammonium Transporter Family OF401_01035 PF00989 PAS fold OF401_01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_01035 PF00512 His Kinase A (phospho-acceptor) domain OF401_01040 PF00158 Sigma-54 interaction domain OF401_01040 PF00072 Response regulator receiver domain OF401_01040 PF02954 Bacterial regulatory protein, Fis family OF401_01045 PF00080 Copper/zinc superoxide dismutase (SODC) OF401_01050 PF00080 Copper/zinc superoxide dismutase (SODC) OF401_01055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OF401_01065 PF02803 Thiolase, C-terminal domain OF401_01065 PF00108 Thiolase, N-terminal domain OF401_01105 PF00581 Rhodanese-like domain OF401_01110 PF02556 Preprotein translocase subunit SecB OF401_01115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OF401_01115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OF401_01125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OF401_01125 PF00205 Thiamine pyrophosphate enzyme, central domain OF401_01125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OF401_01140 PF00588 SpoU rRNA Methylase family OF401_01155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OF401_01155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OF401_01160 PF02661 Fic/DOC family OF401_01160 PF13784 Fic/DOC family N-terminal OF401_01165 PF00561 alpha/beta hydrolase fold OF401_01170 PF03692 Putative zinc- or iron-chelating domain OF401_01180 PF00501 AMP-binding enzyme OF401_01185 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OF401_01200 PF01820 D-ala D-ala ligase N-terminus OF401_01200 PF07478 D-ala D-ala ligase C-terminus OF401_01210 PF03109 ABC1 family OF401_01215 PF00849 RNA pseudouridylate synthase OF401_01225 PF00472 RF-1 domain OF401_01235 PF01112 Asparaginase OF401_01240 PF01432 Peptidase family M3 OF401_01250 PF12706 Beta-lactamase superfamily domain OF401_01265 PF12833 Helix-turn-helix domain OF401_01270 PF03466 LysR substrate binding domain OF401_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_01275 PF01274 Malate synthase OF401_01280 PF00463 Isocitrate lyase family OF401_01285 PF00990 Diguanylate cyclase, GGDEF domain OF401_01305 PF00326 Prolyl oligopeptidase family OF401_01310 PF00289 Biotin carboxylase, N-terminal domain OF401_01310 PF00364 Biotin-requiring enzyme OF401_01310 PF02785 Biotin carboxylase C-terminal domain OF401_01310 PF18140 Propionyl-coenzyme A carboxylase BT domain OF401_01310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OF401_01315 PF01039 Carboxyl transferase domain OF401_01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_01320 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_01320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_01360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III OF401_01375 PF02492 CobW/HypB/UreG, nucleotide-binding domain OF401_01375 PF07683 Cobalamin synthesis protein cobW C-terminal domain OF401_01395 PF03969 AFG1-like ATPase OF401_01405 PF01047 MarR family OF401_01410 PF02566 OsmC-like protein OF401_01420 PF07859 alpha/beta hydrolase fold OF401_01440 PF00248 Aldo/keto reductase family OF401_01445 PF00107 Zinc-binding dehydrogenase OF401_01445 PF16884 N-terminal domain of oxidoreductase OF401_01450 PF00248 Aldo/keto reductase family OF401_01460 PF00849 RNA pseudouridylate synthase OF401_01470 PF00270 DEAD/DEAH box helicase OF401_01470 PF04408 Helicase associated domain (HA2) OF401_01470 PF00271 Helicase conserved C-terminal domain OF401_01470 PF08482 ATP-dependent helicase C-terminal OF401_01475 PF00672 HAMP domain OF401_01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_01475 PF02203 Tar ligand binding domain homologue OF401_01480 PF07308 Protein of unknown function (DUF1456) OF401_01485 PF00576 HIUase/Transthyretin family OF401_01490 PF13454 FAD-NAD(P)-binding OF401_01510 PF00266 Aminotransferase class-V OF401_01515 PF07687 Peptidase dimerisation domain OF401_01515 PF01546 Peptidase family M20/M25/M40 OF401_01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_01520 PF03466 LysR substrate binding domain OF401_01530 PF07690 Major Facilitator Superfamily OF401_01535 PF03372 Endonuclease/Exonuclease/phosphatase family OF401_01540 PF03372 Endonuclease/Exonuclease/phosphatase family OF401_01545 PF13091 PLD-like domain OF401_01555 PF01425 Amidase OF401_01560 PF01156 Inosine-uridine preferring nucleoside hydrolase OF401_01570 PF00860 Permease family OF401_01575 PF00111 2Fe-2S iron-sulfur cluster binding domain OF401_01580 PF00355 Rieske [2Fe-2S] domain OF401_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_01585 PF03466 LysR substrate binding domain OF401_01590 PF01026 TatD related DNase OF401_01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_01600 PF03466 LysR substrate binding domain OF401_01605 PF07690 Major Facilitator Superfamily OF401_01620 PF02146 Sir2 family OF401_01625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OF401_01630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OF401_01630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OF401_01640 PF00551 Formyl transferase OF401_01650 PF00106 short chain dehydrogenase OF401_01660 PF02219 Methylenetetrahydrofolate reductase OF401_01665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_01665 PF03466 LysR substrate binding domain OF401_01670 PF03358 NADPH-dependent FMN reductase OF401_01680 PF01717 Cobalamin-independent synthase, Catalytic domain OF401_01680 PF08267 Cobalamin-independent synthase, N-terminal domain OF401_01695 PF05368 NmrA-like family OF401_01700 PF01638 HxlR-like helix-turn-helix OF401_01710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_01710 PF00672 HAMP domain OF401_01780 PF11008 Protein of unknown function (DUF2846) OF401_01795 PF05598 Transposase domain (DUF772) OF401_01795 PF01609 Transposase DDE domain OF401_01820 PF00589 Phage integrase family OF401_01820 PF13495 Phage integrase, N-terminal SAM-like domain OF401_01830 PF00920 Dehydratase family OF401_01850 PF00132 Bacterial transferase hexapeptide (six repeats) OF401_01860 PF07690 Major Facilitator Superfamily OF401_01865 PF11871 Domain of unknown function (DUF3391) OF401_01865 PF01966 HD domain OF401_01885 PF00171 Aldehyde dehydrogenase family OF401_01895 PF01494 FAD binding domain OF401_01905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OF401_01905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OF401_01910 PF00230 Major intrinsic protein OF401_01915 PF01266 FAD dependent oxidoreductase OF401_01915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OF401_01920 PF00455 DeoR C terminal sensor domain OF401_01920 PF08220 DeoR-like helix-turn-helix domain OF401_01925 PF00970 Oxidoreductase FAD-binding domain OF401_01925 PF00111 2Fe-2S iron-sulfur cluster binding domain OF401_01930 PF00355 Rieske [2Fe-2S] domain OF401_01935 PF01144 Coenzyme A transferase OF401_01940 PF01144 Coenzyme A transferase OF401_01945 PF02803 Thiolase, C-terminal domain OF401_01945 PF00108 Thiolase, N-terminal domain OF401_01950 PF00775 Dioxygenase OF401_01950 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OF401_01955 PF00775 Dioxygenase OF401_01955 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OF401_01960 PF10397 Adenylosuccinate lyase C-terminus OF401_01960 PF00206 Lyase OF401_01965 PF12146 Serine aminopeptidase, S33 OF401_01970 PF02627 Carboxymuconolactone decarboxylase family OF401_01980 PF09339 IclR helix-turn-helix domain OF401_01980 PF01614 Bacterial transcriptional regulator OF401_01990 PF07859 alpha/beta hydrolase fold OF401_01995 PF10677 Protein of unknown function (DUF2490) OF401_02000 PF13932 GidA associated domain OF401_02000 PF01134 Glucose inhibited division protein A OF401_02010 PF00291 Pyridoxal-phosphate dependent enzyme OF401_02030 PF13649 Methyltransferase domain OF401_02040 PF12697 Alpha/beta hydrolase family OF401_02050 PF00155 Aminotransferase class I and II OF401_02055 PF04055 Radical SAM superfamily OF401_02055 PF06968 Biotin and Thiamin Synthesis associated domain OF401_02065 PF01040 UbiA prenyltransferase family OF401_02075 PF13356 Arm DNA-binding domain OF401_02075 PF00589 Phage integrase family OF401_02085 PF07715 TonB-dependent Receptor Plug Domain OF401_02085 PF00593 TonB dependent receptor OF401_02090 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OF401_02090 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OF401_02105 PF07715 TonB-dependent Receptor Plug Domain OF401_02105 PF00593 TonB dependent receptor OF401_02125 PF00924 Mechanosensitive ion channel OF401_02125 PF12795 Mechanosensitive ion channel porin domain OF401_02125 PF12794 Mechanosensitive ion channel inner membrane domain 1 OF401_02130 PF00884 Sulfatase OF401_02140 PF03109 ABC1 family OF401_02145 PF05661 Protein of unknown function (DUF808) OF401_02150 PF02638 Glycosyl hydrolase-like 10 OF401_02155 PF00990 Diguanylate cyclase, GGDEF domain OF401_02160 PF00534 Glycosyl transferases group 1 OF401_02160 PF08323 Starch synthase catalytic domain OF401_02165 PF00128 Alpha amylase, catalytic domain OF401_02165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OF401_02165 PF02806 Alpha amylase, C-terminal all-beta domain OF401_02170 PF00128 Alpha amylase, catalytic domain OF401_02170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OF401_02170 PF11941 Domain of unknown function (DUF3459) OF401_02175 PF02446 4-alpha-glucanotransferase OF401_02180 PF00128 Alpha amylase, catalytic domain OF401_02190 PF00128 Alpha amylase, catalytic domain OF401_02190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OF401_02195 PF13460 NAD(P)H-binding OF401_02210 PF06903 VirK protein OF401_02215 PF02321 Outer membrane efflux protein OF401_02220 PF00440 Bacterial regulatory proteins, tetR family OF401_02230 PF00873 AcrB/AcrD/AcrF family OF401_02250 PF00271 Helicase conserved C-terminal domain OF401_02250 PF00270 DEAD/DEAH box helicase OF401_02260 PF00364 Biotin-requiring enzyme OF401_02260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OF401_02260 PF02817 e3 binding domain OF401_02270 PF02779 Transketolase, pyrimidine binding domain OF401_02270 PF02780 Transketolase, C-terminal domain OF401_02275 PF00676 Dehydrogenase E1 component OF401_02285 PF03301 Tryptophan 2,3-dioxygenase OF401_02290 PF00854 POT family OF401_02300 PF01047 MarR family OF401_02305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OF401_02310 PF04480 Protein of unknown function (DUF559) OF401_02315 PF04209 homogentisate 1,2-dioxygenase OF401_02335 PF03334 Na+/H+ antiporter subunit OF401_02340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OF401_02350 PF00361 Proton-conducting membrane transporter OF401_02355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OF401_02360 PF13244 Domain of unknown function (DUF4040) OF401_02360 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OF401_02360 PF00361 Proton-conducting membrane transporter OF401_02360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OF401_02400 PF01259 SAICAR synthetase OF401_02405 PF00226 DnaJ domain OF401_02405 PF01556 DnaJ C terminal domain OF401_02405 PF00684 DnaJ central domain OF401_02415 PF00834 Ribulose-phosphate 3 epimerase family OF401_02425 PF00781 Diacylglycerol kinase catalytic domain OF401_02430 PF00425 chorismate binding enzyme OF401_02430 PF04715 Anthranilate synthase component I, N terminal region OF401_02435 PF00155 Aminotransferase class I and II OF401_02445 PF00117 Glutamine amidotransferase class-I OF401_02450 PF01613 Flavin reductase like domain OF401_02455 PF00591 Glycosyl transferase family, a/b domain OF401_02455 PF02885 Glycosyl transferase family, helical bundle domain OF401_02460 PF00218 Indole-3-glycerol phosphate synthase OF401_02470 PF00325 Bacterial regulatory proteins, crp family OF401_02470 PF00027 Cyclic nucleotide-binding domain OF401_02475 PF02675 S-adenosylmethionine decarboxylase OF401_02480 PF00893 Small Multidrug Resistance protein OF401_02485 PF03232 Ubiquinone biosynthesis protein COQ7 OF401_02490 PF00572 Ribosomal protein L13 OF401_02495 PF00380 Ribosomal protein S9/S16 OF401_02510 PF00293 NUDIX domain OF401_02520 PF00210 Ferritin-like domain OF401_02525 PF01627 Hpt domain OF401_02525 PF00672 HAMP domain OF401_02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_02525 PF00512 His Kinase A (phospho-acceptor) domain OF401_02525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OF401_02525 PF00072 Response regulator receiver domain OF401_02530 PF00486 Transcriptional regulatory protein, C terminal OF401_02530 PF00072 Response regulator receiver domain OF401_02550 PF01521 Iron-sulphur cluster biosynthesis OF401_02555 PF00293 NUDIX domain OF401_02555 PF09297 NADH pyrophosphatase zinc ribbon domain OF401_02555 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain OF401_02560 PF17113 Regulatory signalling modulator protein AmpE OF401_02560 PF03186 CobD/Cbib protein OF401_02585 PF03466 LysR substrate binding domain OF401_02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_02590 PF07690 Major Facilitator Superfamily OF401_02600 PF12805 FUSC-like inner membrane protein yccS OF401_02605 PF02843 Phosphoribosylglycinamide synthetase, C domain OF401_02605 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OF401_02605 PF02844 Phosphoribosylglycinamide synthetase, N domain OF401_02615 PF01808 AICARFT/IMPCHase bienzyme OF401_02615 PF02142 MGS-like domain OF401_02620 PF01066 CDP-alcohol phosphatidyltransferase OF401_02625 PF12146 Serine aminopeptidase, S33 OF401_02625 PF12147 Putative methyltransferase OF401_02630 PF00782 Dual specificity phosphatase, catalytic domain OF401_02665 PF00818 Ice nucleation protein repeat OF401_02665 PF00818 Ice nucleation protein repeat OF401_02670 PF02954 Bacterial regulatory protein, Fis family OF401_02680 PF01381 Helix-turn-helix OF401_02705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OF401_02705 PF00289 Biotin carboxylase, N-terminal domain OF401_02705 PF02785 Biotin carboxylase C-terminal domain OF401_02715 PF00364 Biotin-requiring enzyme OF401_02720 PF01220 Dehydroquinase class II OF401_02725 PF11412 Disulphide bond corrector protein DsbC OF401_02725 PF02683 Cytochrome C biogenesis protein transmembrane region OF401_02730 PF03091 CutA1 divalent ion tolerance protein OF401_02735 PF04231 Endonuclease I OF401_02740 PF00166 Chaperonin 10 Kd subunit OF401_02745 PF00118 TCP-1/cpn60 chaperonin family OF401_02750 PF00176 SNF2 family N-terminal domain OF401_02750 PF00271 Helicase conserved C-terminal domain OF401_02755 PF13749 Putative ATP-dependent DNA helicase recG C-terminal OF401_02755 PF00270 DEAD/DEAH box helicase OF401_02755 PF17191 RecG wedge domain OF401_02765 PF01738 Dienelactone hydrolase family OF401_02785 PF07715 TonB-dependent Receptor Plug Domain OF401_02785 PF00593 TonB dependent receptor OF401_02805 PF00793 DAHP synthetase I family OF401_02815 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain OF401_02815 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain OF401_02830 PF08450 SMP-30/Gluconolactonase/LRE-like region OF401_02845 PF16220 Domain of unknown function (DUF4880) OF401_02845 PF04773 FecR protein OF401_02855 PF07660 Secretin and TonB N terminus short domain OF401_02855 PF07715 TonB-dependent Receptor Plug Domain OF401_02855 PF00593 TonB dependent receptor OF401_02875 PF08335 GlnD PII-uridylyltransferase OF401_02875 PF03710 Glutamate-ammonia ligase adenylyltransferase OF401_02885 PF02592 Putative vitamin uptake transporter OF401_02905 PF00881 Nitroreductase family OF401_02910 PF04264 YceI-like domain OF401_02920 PF03551 Transcriptional regulator PadR-like family OF401_02920 PF13847 Methyltransferase domain OF401_02925 PF16957 Malonate decarboxylase, alpha subunit, transporter OF401_02930 PF06857 Malonate decarboxylase delta subunit (MdcD) OF401_02935 PF01039 Carboxyl transferase domain OF401_02945 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OF401_02950 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OF401_02955 PF08659 KR domain OF401_02955 PF00550 Phosphopantetheine attachment site OF401_02955 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_02955 PF16197 Ketoacyl-synthetase C-terminal extension OF401_02955 PF00698 Acyl transferase domain OF401_02955 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_02965 PF00392 Bacterial regulatory proteins, gntR family OF401_02965 PF07729 FCD domain OF401_03005 PF07745 Glycosyl hydrolase family 53 OF401_03010 PF17831 Pyruvate dehydrogenase E1 component middle domain OF401_03010 PF00456 Transketolase, thiamine diphosphate binding domain OF401_03015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OF401_03020 PF05598 Transposase domain (DUF772) OF401_03030 PF05598 Transposase domain (DUF772) OF401_03030 PF01609 Transposase DDE domain OF401_03100 PF05598 Transposase domain (DUF772) OF401_03100 PF01609 Transposase DDE domain OF401_03135 PF13409 Glutathione S-transferase, N-terminal domain OF401_03160 PF11838 ERAP1-like C-terminal domain OF401_03160 PF01433 Peptidase family M1 domain OF401_03195 PF12823 Domain of unknown function (DUF3817) OF401_03195 PF03176 MMPL family OF401_03205 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OF401_03205 PF00326 Prolyl oligopeptidase family OF401_03210 PF07759 Protein of unknown function (DUF1615) OF401_03215 PF00990 Diguanylate cyclase, GGDEF domain OF401_03250 PF00892 EamA-like transporter family OF401_03255 PF00497 Bacterial extracellular solute-binding proteins, family 3 OF401_03265 PF01609 Transposase DDE domain OF401_03265 PF05598 Transposase domain (DUF772) OF401_03270 PF03330 Lytic transglycolase OF401_03275 PF01341 Glycosyl hydrolases family 6 OF401_03275 PF00041 Fibronectin type III domain OF401_03275 PF00553 Cellulose binding domain OF401_03285 PF00324 Amino acid permease OF401_03290 PF01544 CorA-like Mg2+ transporter protein OF401_03305 PF01204 Trehalase OF401_03315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OF401_03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OF401_03345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_03345 PF00672 HAMP domain OF401_03345 PF02203 Tar ligand binding domain homologue OF401_03350 PF00553 Cellulose binding domain OF401_03350 PF00150 Cellulase (glycosyl hydrolase family 5) OF401_03355 PF01740 STAS domain OF401_03355 PF00916 Sulfate permease family OF401_03360 PF00990 Diguanylate cyclase, GGDEF domain OF401_03360 PF08448 PAS fold OF401_03365 PF00593 TonB dependent receptor OF401_03365 PF07660 Secretin and TonB N terminus short domain OF401_03365 PF07715 TonB-dependent Receptor Plug Domain OF401_03375 PF03600 Citrate transporter OF401_03375 PF02080 TrkA-C domain OF401_03380 PF13632 Glycosyl transferase family group 2 OF401_03390 PF07694 5TMR of 5TMR-LYT OF401_03390 PF06580 Histidine kinase OF401_03395 PF04397 LytTr DNA-binding domain OF401_03395 PF00072 Response regulator receiver domain OF401_03400 PF03900 Porphobilinogen deaminase, C-terminal domain OF401_03400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OF401_03430 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OF401_03430 PF00326 Prolyl oligopeptidase family OF401_03445 PF00155 Aminotransferase class I and II OF401_03450 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OF401_03450 PF00326 Prolyl oligopeptidase family OF401_03455 PF04304 Protein of unknown function (DUF454) OF401_03465 PF01678 Diaminopimelate epimerase OF401_03475 PF00589 Phage integrase family OF401_03475 PF02899 Phage integrase, N-terminal SAM-like domain OF401_03480 PF00227 Proteasome subunit OF401_03485 PF10431 C-terminal, D2-small domain, of ClpB protein OF401_03485 PF00004 ATPase family associated with various cellular activities (AAA) OF401_03485 PF07724 AAA domain (Cdc48 subfamily) OF401_03500 PF13673 Acetyltransferase (GNAT) domain OF401_03505 PF13533 Biotin-lipoyl like OF401_03515 PF01209 ubiE/COQ5 methyltransferase family OF401_03520 PF00563 EAL domain OF401_03520 PF00990 Diguanylate cyclase, GGDEF domain OF401_03520 PF03707 Bacterial signalling protein N terminal repeat OF401_03525 PF11838 ERAP1-like C-terminal domain OF401_03525 PF01433 Peptidase family M1 domain OF401_03540 PF13360 PQQ-like domain OF401_03545 PF00497 Bacterial extracellular solute-binding proteins, family 3 OF401_03560 PF08240 Alcohol dehydrogenase GroES-like domain OF401_03560 PF00107 Zinc-binding dehydrogenase OF401_03565 PF00593 TonB dependent receptor OF401_03565 PF07715 TonB-dependent Receptor Plug Domain OF401_03565 PF07660 Secretin and TonB N terminus short domain OF401_03570 PF00158 Sigma-54 interaction domain OF401_03570 PF02954 Bacterial regulatory protein, Fis family OF401_03570 PF01590 GAF domain OF401_03575 PF00294 pfkB family carbohydrate kinase OF401_03590 PF04085 rod shape-determining protein MreC OF401_03600 PF03717 Penicillin-binding Protein dimerisation domain OF401_03600 PF00905 Penicillin binding protein transpeptidase domain OF401_03605 PF01098 Cell cycle protein OF401_03615 PF02534 Type IV secretory system Conjugative DNA transfer OF401_03635 PF00295 Glycosyl hydrolases family 28 OF401_03640 PF13406 Transglycosylase SLT domain OF401_03645 PF05036 Sporulation related domain OF401_03645 PF03330 Lytic transglycolase OF401_03650 PF00768 D-alanyl-D-alanine carboxypeptidase OF401_03650 PF07943 Penicillin-binding protein 5, C-terminal domain OF401_03665 PF04359 Protein of unknown function (DUF493) OF401_03670 PF03099 Biotin/lipoate A/B protein ligase family OF401_03675 PF04055 Radical SAM superfamily OF401_03675 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family OF401_03680 PF17804 Tail specific protease N-terminal domain OF401_03680 PF03572 Peptidase family S41 OF401_03680 PF00595 PDZ domain OF401_03680 PF11818 C-terminal domain of tail specific protease (DUF3340) OF401_03690 PF03466 LysR substrate binding domain OF401_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_03700 PF00293 NUDIX domain OF401_03700 PF01467 Cytidylyltransferase-like OF401_03735 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain OF401_03735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OF401_03740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OF401_03740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OF401_03745 PF04972 BON domain OF401_03750 PF07519 Tannase and feruloyl esterase OF401_03755 PF08446 PAS fold OF401_03755 PF00360 Phytochrome region OF401_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_03755 PF01590 GAF domain OF401_03755 PF00512 His Kinase A (phospho-acceptor) domain OF401_03760 PF00072 Response regulator receiver domain OF401_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_03765 PF00512 His Kinase A (phospho-acceptor) domain OF401_03770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OF401_03810 PF00263 Bacterial type II and III secretion system protein OF401_03810 PF03958 Bacterial type II/III secretion system short domain OF401_03815 PF00437 Type II/IV secretion system protein OF401_03820 PF00482 Type II secretion system (T2SS), protein F OF401_03825 PF07963 Prokaryotic N-terminal methylation motif OF401_03825 PF08334 Type II secretion system (T2SS), protein G OF401_03835 PF07963 Prokaryotic N-terminal methylation motif OF401_03835 PF02501 Type II secretion system (T2SS), protein I OF401_03840 PF07963 Prokaryotic N-terminal methylation motif OF401_03840 PF11612 Type II secretion system (T2SS), protein J OF401_03845 PF03934 Type II secretion system (T2SS), protein K OF401_03865 PF07702 UTRA domain OF401_03865 PF00392 Bacterial regulatory proteins, gntR family OF401_03870 PF07690 Major Facilitator Superfamily OF401_03875 PF00356 Bacterial regulatory proteins, lacI family OF401_03880 PF01380 SIS domain OF401_03885 PF01979 Amidohydrolase family OF401_03900 PF12627 Probable RNA and SrmB- binding site of polymerase A OF401_03900 PF01966 HD domain OF401_03900 PF01743 Poly A polymerase head domain OF401_03905 PF01464 Transglycosylase SLT domain OF401_03905 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain OF401_03910 PF00593 TonB dependent receptor OF401_03910 PF07715 TonB-dependent Receptor Plug Domain OF401_03920 PF00732 GMC oxidoreductase OF401_03920 PF05199 GMC oxidoreductase OF401_03925 PF00171 Aldehyde dehydrogenase family OF401_03930 PF02028 BCCT, betaine/carnitine/choline family transporter OF401_03940 PF01323 DSBA-like thioredoxin domain OF401_03950 PF00034 Cytochrome c OF401_03955 PF01926 50S ribosome-binding GTPase OF401_03960 PF04107 Glutamate-cysteine ligase family 2(GCS2) OF401_03965 PF00672 HAMP domain OF401_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_03965 PF00512 His Kinase A (phospho-acceptor) domain OF401_03970 PF00486 Transcriptional regulatory protein, C terminal OF401_03970 PF00072 Response regulator receiver domain OF401_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_03985 PF03466 LysR substrate binding domain OF401_03990 PF02583 Metal-sensitive transcriptional repressor OF401_03995 PF00107 Zinc-binding dehydrogenase OF401_03995 PF08240 Alcohol dehydrogenase GroES-like domain OF401_04000 PF04828 Glutathione-dependent formaldehyde-activating enzyme OF401_04005 PF00756 Putative esterase OF401_04015 PF00392 Bacterial regulatory proteins, gntR family OF401_04015 PF00155 Aminotransferase class I and II OF401_04020 PF02567 Phenazine biosynthesis-like protein OF401_04025 PF00892 EamA-like transporter family OF401_04035 PF02645 Uncharacterised protein, DegV family COG1307 OF401_04075 PF01979 Amidohydrolase family OF401_04080 PF01979 Amidohydrolase family OF401_04095 PF00462 Glutaredoxin OF401_04100 PF01522 Polysaccharide deacetylase OF401_04115 PF00155 Aminotransferase class I and II OF401_04125 PF03193 RsgA GTPase OF401_04140 PF00128 Alpha amylase, catalytic domain OF401_04155 PF00356 Bacterial regulatory proteins, lacI family OF401_04160 PF00106 short chain dehydrogenase OF401_04165 PF03600 Citrate transporter OF401_04175 PF00072 Response regulator receiver domain OF401_04175 PF00486 Transcriptional regulatory protein, C terminal OF401_04180 PF08521 Two-component sensor kinase N-terminal OF401_04180 PF00512 His Kinase A (phospho-acceptor) domain OF401_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_04190 PF00196 Bacterial regulatory proteins, luxR family OF401_04190 PF00072 Response regulator receiver domain OF401_04205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_04205 PF00512 His Kinase A (phospho-acceptor) domain OF401_04215 PF00375 Sodium:dicarboxylate symporter family OF401_04220 PF00390 Malic enzyme, N-terminal domain OF401_04220 PF03949 Malic enzyme, NAD binding domain OF401_04220 PF01515 Phosphate acetyl/butaryl transferase OF401_04245 PF03279 Bacterial lipid A biosynthesis acyltransferase OF401_04250 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OF401_04255 PF02321 Outer membrane efflux protein OF401_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_04280 PF00330 Aconitase family (aconitate hydratase) OF401_04285 PF00694 Aconitase C-terminal domain OF401_04290 PF08241 Methyltransferase domain OF401_04295 PF00180 Isocitrate/isopropylmalate dehydrogenase OF401_04300 PF08502 LeuA allosteric (dimerisation) domain OF401_04300 PF00682 HMGL-like OF401_04305 PF00291 Pyridoxal-phosphate dependent enzyme OF401_04315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OF401_04315 PF00205 Thiamine pyrophosphate enzyme, central domain OF401_04315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OF401_04320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OF401_04320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OF401_04330 PF02203 Tar ligand binding domain homologue OF401_04330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_04330 PF00672 HAMP domain OF401_04335 PF07676 WD40-like Beta Propeller Repeat OF401_04335 PF00326 Prolyl oligopeptidase family OF401_04340 PF13667 ThiC-associated domain OF401_04340 PF01964 Radical SAM ThiC family OF401_04345 PF18500 CadC C-terminal domain 1 OF401_04345 PF00486 Transcriptional regulatory protein, C terminal OF401_04350 PF12833 Helix-turn-helix domain OF401_04355 PF07715 TonB-dependent Receptor Plug Domain OF401_04355 PF00593 TonB dependent receptor OF401_04365 PF00719 Inorganic pyrophosphatase OF401_04375 PF03030 Inorganic H+ pyrophosphatase OF401_04410 PF01609 Transposase DDE domain OF401_04410 PF05598 Transposase domain (DUF772) OF401_04420 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OF401_04440 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OF401_04450 PF00365 Phosphofructokinase OF401_04460 PF08245 Mur ligase middle domain OF401_04460 PF02875 Mur ligase family, glutamate ligase domain OF401_04460 PF01225 Mur ligase family, catalytic domain OF401_04470 PF01062 Bestrophin, RFP-TM, chloride channel OF401_04475 PF01569 PAP2 superfamily OF401_04495 PF00027 Cyclic nucleotide-binding domain OF401_04495 PF00520 Ion transport protein OF401_04500 PF00202 Aminotransferase class-III OF401_04515 PF01593 Flavin containing amine oxidoreductase OF401_04520 PF00034 Cytochrome c OF401_04520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III OF401_04530 PF00155 Aminotransferase class I and II OF401_04535 PF00127 Copper binding proteins, plastocyanin/azurin family OF401_04540 PF00196 Bacterial regulatory proteins, luxR family OF401_04540 PF17874 MalT-like TPR region OF401_04545 PF00202 Aminotransferase class-III OF401_04555 PF02581 Thiamine monophosphate synthase OF401_04560 PF00301 Rubredoxin OF401_04565 PF13369 Transglutaminase-like superfamily OF401_04575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OF401_04585 PF01812 5-formyltetrahydrofolate cyclo-ligase family OF401_04595 PF05164 Cell division protein ZapA OF401_04605 PF03695 Uncharacterised protein family (UPF0149) OF401_04610 PF05195 Aminopeptidase P, N-terminal domain OF401_04610 PF00557 Metallopeptidase family M24 OF401_04620 PF00557 Metallopeptidase family M24 OF401_04635 PF06969 HemN C-terminal domain OF401_04635 PF04055 Radical SAM superfamily OF401_04640 PF01725 Ham1 family OF401_04645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OF401_04650 PF01138 3' exoribonuclease family, domain 1 OF401_04650 PF03725 3' exoribonuclease family, domain 2 OF401_04655 PF08340 Domain of unknown function (DUF1732) OF401_04655 PF03755 YicC-like family, N-terminal region OF401_04660 PF00625 Guanylate kinase OF401_04665 PF01192 RNA polymerase Rpb6 OF401_04670 PF13291 ACT domain OF401_04670 PF04607 Region found in RelA / SpoT proteins OF401_04670 PF02824 TGS domain OF401_04680 PF03466 LysR substrate binding domain OF401_04680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_04685 PF00701 Dihydrodipicolinate synthetase family OF401_04690 PF00171 Aldehyde dehydrogenase family OF401_04695 PF07690 Major Facilitator Superfamily OF401_04700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OF401_04700 PF13378 Enolase C-terminal domain-like OF401_04705 PF03573 outer membrane porin, OprD family OF401_04710 PF08666 SAF domain OF401_04710 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus OF401_04715 PF01042 Endoribonuclease L-PSP OF401_04720 PF17191 RecG wedge domain OF401_04720 PF00271 Helicase conserved C-terminal domain OF401_04720 PF00270 DEAD/DEAH box helicase OF401_04725 PF01156 Inosine-uridine preferring nucleoside hydrolase OF401_04730 PF01197 Ribosomal protein L31 OF401_04735 PF00285 Citrate synthase, C-terminal domain OF401_04750 PF17092 Penicillin-binding protein OB-like domain OF401_04750 PF00912 Transglycosylase OF401_04750 PF00905 Penicillin binding protein transpeptidase domain OF401_04755 PF11104 Type IV pilus assembly protein PilM; OF401_04760 PF05137 Fimbrial assembly protein (PilN) OF401_04765 PF04350 Pilus assembly protein, PilO OF401_04770 PF04351 Pilus assembly protein, PilP OF401_04775 PF11741 AMIN domain OF401_04775 PF00263 Bacterial type II and III secretion system protein OF401_04775 PF03958 Bacterial type II/III secretion system short domain OF401_04775 PF07660 Secretin and TonB N terminus short domain OF401_04780 PF07726 ATPase family associated with various cellular activities (AAA) OF401_04780 PF17863 AAA lid domain OF401_04800 PF07584 Aerotolerance regulator N-terminal OF401_04800 PF00092 von Willebrand factor type A domain OF401_04810 PF00375 Sodium:dicarboxylate symporter family OF401_04815 PF02779 Transketolase, pyrimidine binding domain OF401_04815 PF02780 Transketolase, C-terminal domain OF401_04815 PF00456 Transketolase, thiamine diphosphate binding domain OF401_04820 PF12146 Serine aminopeptidase, S33 OF401_04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_04830 PF03466 LysR substrate binding domain OF401_04840 PF01551 Peptidase family M23 OF401_04840 PF04225 Opacity-associated protein A LysM-like domain OF401_04845 PF03734 L,D-transpeptidase catalytic domain OF401_04845 PF01476 LysM domain OF401_04865 PF03965 Penicillinase repressor OF401_04885 PF00005 ABC transporter OF401_04885 PF03459 TOBE domain OF401_04890 PF00528 Binding-protein-dependent transport system inner membrane component OF401_04915 PF04273 Putative phosphatase (DUF442) OF401_04915 PF00753 Metallo-beta-lactamase superfamily OF401_04925 PF01609 Transposase DDE domain OF401_04925 PF05598 Transposase domain (DUF772) OF401_04935 PF03922 OmpW family OF401_04950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OF401_04950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OF401_04970 PF00162 Phosphoglycerate kinase OF401_04975 PF13419 Haloacid dehalogenase-like hydrolase OF401_04980 PF02887 Pyruvate kinase, alpha/beta domain OF401_04980 PF00224 Pyruvate kinase, barrel domain OF401_04985 PF00274 Fructose-bisphosphate aldolase class-I OF401_04990 PF01661 Macro domain OF401_05005 PF00291 Pyridoxal-phosphate dependent enzyme OF401_05010 PF10414 Sirohaem synthase dimerisation region OF401_05010 PF14824 Sirohaem biosynthesis protein central OF401_05010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OF401_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_05015 PF03466 LysR substrate binding domain OF401_05025 PF00072 Response regulator receiver domain OF401_05025 PF00672 HAMP domain OF401_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_05025 PF00512 His Kinase A (phospho-acceptor) domain OF401_05025 PF01627 Hpt domain OF401_05045 PF01507 Phosphoadenosine phosphosulfate reductase family OF401_05050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OF401_05050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OF401_05055 PF00667 FAD binding domain OF401_05055 PF00258 Flavodoxin OF401_05055 PF00175 Oxidoreductase NAD-binding domain OF401_05060 PF01507 Phosphoadenosine phosphosulfate reductase family OF401_05065 PF00009 Elongation factor Tu GTP binding domain OF401_05070 PF00529 HlyD membrane-fusion protein of T1SS OF401_05070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_05075 PF00873 AcrB/AcrD/AcrF family OF401_05080 PF11838 ERAP1-like C-terminal domain OF401_05080 PF01433 Peptidase family M1 domain OF401_05090 PF01235 Sodium:alanine symporter family OF401_05095 PF00588 SpoU rRNA Methylase family OF401_05095 PF08032 RNA 2'-O ribose methyltransferase substrate binding OF401_05100 PF00135 Carboxylesterase family OF401_05105 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OF401_05105 PF10566 Glycoside hydrolase 97 OF401_05105 PF14508 Glycosyl-hydrolase 97 N-terminal OF401_05125 PF00356 Bacterial regulatory proteins, lacI family OF401_05135 PF01741 Large-conductance mechanosensitive channel, MscL OF401_05140 PF01557 Fumarylacetoacetate (FAA) hydrolase family OF401_05155 PF02080 TrkA-C domain OF401_05155 PF03600 Citrate transporter OF401_05160 PF02390 Putative methyltransferase OF401_05165 PF05690 Thiazole biosynthesis protein ThiG OF401_05175 PF03797 Autotransporter beta-domain OF401_05175 PF00657 GDSL-like Lipase/Acylhydrolase OF401_05185 PF14659 Phage integrase, N-terminal SAM-like domain OF401_05185 PF00589 Phage integrase family OF401_05185 PF13356 Arm DNA-binding domain OF401_05205 PF01381 Helix-turn-helix OF401_05240 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OF401_05275 PF04002 RadC-like JAB domain OF401_05340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OF401_05340 PF00128 Alpha amylase, catalytic domain OF401_05345 PF08443 RimK-like ATP-grasp domain OF401_05345 PF18030 RimK PreATP-grasp domain OF401_05350 PF00072 Response regulator receiver domain OF401_05350 PF00486 Transcriptional regulatory protein, C terminal OF401_05355 PF11808 Phosphate regulon sensor protein PhoR OF401_05355 PF00989 PAS fold OF401_05355 PF00512 His Kinase A (phospho-acceptor) domain OF401_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_05375 PF01121 Dephospho-CoA kinase OF401_05380 PF06750 Bacterial Peptidase A24 N-terminal domain OF401_05380 PF01478 Type IV leader peptidase family OF401_05385 PF00482 Type II secretion system (T2SS), protein F OF401_05390 PF07963 Prokaryotic N-terminal methylation motif OF401_05390 PF00114 Pilin (bacterial filament) OF401_05395 PF00437 Type II/IV secretion system protein OF401_05395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OF401_05405 PF02954 Bacterial regulatory protein, Fis family OF401_05405 PF00072 Response regulator receiver domain OF401_05405 PF00158 Sigma-54 interaction domain OF401_05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_05410 PF00512 His Kinase A (phospho-acceptor) domain OF401_05415 PF00549 CoA-ligase OF401_05415 PF08442 ATP-grasp domain OF401_05420 PF02629 CoA binding domain OF401_05420 PF00549 CoA-ligase OF401_05435 PF00795 Carbon-nitrogen hydrolase OF401_05435 PF02540 NAD synthase OF401_05445 PF13525 Outer membrane lipoprotein OF401_05450 PF00849 RNA pseudouridylate synthase OF401_05455 PF02578 Multi-copper polyphenol oxidoreductase laccase OF401_05470 PF02203 Tar ligand binding domain homologue OF401_05470 PF00672 HAMP domain OF401_05470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_05475 PF01011 PQQ enzyme repeat OF401_05485 PF00982 Glycosyltransferase family 20 OF401_05490 PF00723 Glycosyl hydrolases family 15 OF401_05495 PF02358 Trehalose-phosphatase OF401_05500 PF07715 TonB-dependent Receptor Plug Domain OF401_05500 PF00593 TonB dependent receptor OF401_05535 PF01541 GIY-YIG catalytic domain OF401_05540 PF00005 ABC transporter OF401_05545 PF10431 C-terminal, D2-small domain, of ClpB protein OF401_05545 PF02861 Clp amino terminal domain, pathogenicity island component OF401_05545 PF17871 AAA lid domain OF401_05545 PF07724 AAA domain (Cdc48 subfamily) OF401_05545 PF00004 ATPase family associated with various cellular activities (AAA) OF401_05555 PF01053 Cys/Met metabolism PLP-dependent enzyme OF401_05560 PF00593 TonB dependent receptor OF401_05560 PF07715 TonB-dependent Receptor Plug Domain OF401_05575 PF12557 Cob(I)alamin adenosyltransferase N terminal OF401_05575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP OF401_05580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OF401_05580 PF07685 CobB/CobQ-like glutamine amidotransferase domain OF401_05585 PF17113 Regulatory signalling modulator protein AmpE OF401_05585 PF03186 CobD/Cbib protein OF401_05595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OF401_05595 PF07685 CobB/CobQ-like glutamine amidotransferase domain OF401_05600 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OF401_05605 PF02277 Phosphoribosyltransferase OF401_05615 PF02654 Cobalamin-5-phosphate synthase OF401_05625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OF401_05625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OF401_05630 PF04183 IucA / IucC family OF401_05630 PF06276 Ferric iron reductase FhuF-like transporter OF401_05635 PF07690 Major Facilitator Superfamily OF401_05640 PF04183 IucA / IucC family OF401_05640 PF06276 Ferric iron reductase FhuF-like transporter OF401_05650 PF00593 TonB dependent receptor OF401_05650 PF07715 TonB-dependent Receptor Plug Domain OF401_05650 PF07660 Secretin and TonB N terminus short domain OF401_05660 PF02254 TrkA-N domain OF401_05660 PF00999 Sodium/hydrogen exchanger family OF401_05665 PF00067 Cytochrome P450 OF401_05670 PF00593 TonB dependent receptor OF401_05670 PF07715 TonB-dependent Receptor Plug Domain OF401_05675 PF00593 TonB dependent receptor OF401_05675 PF07715 TonB-dependent Receptor Plug Domain OF401_05685 PF00593 TonB dependent receptor OF401_05685 PF07715 TonB-dependent Receptor Plug Domain OF401_05690 PF12848 ABC transporter OF401_05690 PF00005 ABC transporter OF401_05700 PF03466 LysR substrate binding domain OF401_05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_05715 PF07859 alpha/beta hydrolase fold OF401_05715 PF13472 GDSL-like Lipase/Acylhydrolase family OF401_05720 PF05506 Domain of unknown function (DUF756) OF401_05720 PF04185 Phosphoesterase family OF401_05730 PF05116 Sucrose-6F-phosphate phosphohydrolase OF401_05730 PF00982 Glycosyltransferase family 20 OF401_05735 PF07690 Major Facilitator Superfamily OF401_05760 PF01336 OB-fold nucleic acid binding domain OF401_05760 PF00152 tRNA synthetases class II (D, K and N) OF401_05760 PF02938 GAD domain OF401_05775 PF01709 Transcriptional regulator OF401_05780 PF02075 Crossover junction endodeoxyribonuclease RuvC OF401_05785 PF01330 RuvA N terminal domain OF401_05785 PF07499 RuvA, C-terminal domain OF401_05790 PF02705 K+ potassium transporter OF401_05800 PF05491 RuvB C-terminal winged helix domain OF401_05800 PF05496 Holliday junction DNA helicase RuvB P-loop domain OF401_05800 PF17864 RuvB AAA lid domain OF401_05805 PF03061 Thioesterase superfamily OF401_05810 PF01618 MotA/TolQ/ExbB proton channel family OF401_05815 PF02472 Biopolymer transport protein ExbD/TolR OF401_05825 PF07676 WD40-like Beta Propeller Repeat OF401_05825 PF04052 TolB amino-terminal domain OF401_05830 PF00691 OmpA family OF401_05840 PF04055 Radical SAM superfamily OF401_05845 PF06508 Queuosine biosynthesis protein QueC OF401_05880 PF00654 Voltage gated chloride channel OF401_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_05885 PF03466 LysR substrate binding domain OF401_05890 PF01810 LysE type translocator OF401_05910 PF00849 RNA pseudouridylate synthase OF401_05910 PF01479 S4 domain OF401_05925 PF00270 DEAD/DEAH box helicase OF401_05925 PF00271 Helicase conserved C-terminal domain OF401_05925 PF00570 HRDC domain OF401_05925 PF16124 RecQ zinc-binding OF401_05925 PF09382 RQC domain OF401_05930 PF00210 Ferritin-like domain OF401_05935 PF00270 DEAD/DEAH box helicase OF401_05935 PF11898 Domain of unknown function (DUF3418) OF401_05935 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OF401_05935 PF00271 Helicase conserved C-terminal domain OF401_05935 PF04408 Helicase associated domain (HA2) OF401_05945 PF02685 Glucokinase OF401_05960 PF13186 Iron-sulfur cluster-binding domain OF401_05960 PF04055 Radical SAM superfamily OF401_05965 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OF401_05970 PF03070 TENA/THI-4/PQQC family OF401_05975 PF12706 Beta-lactamase superfamily domain OF401_05980 PF08042 PqqA family OF401_05985 PF02824 TGS domain OF401_05985 PF13291 ACT domain OF401_05985 PF04607 Region found in RelA / SpoT proteins OF401_05995 PF00535 Glycosyl transferase family 2 OF401_06000 PF14814 Bifunctional transglycosylase second domain OF401_06000 PF00905 Penicillin binding protein transpeptidase domain OF401_06000 PF00912 Transglycosylase OF401_06010 PF04851 Type III restriction enzyme, res subunit OF401_06010 PF13307 Helicase C-terminal domain OF401_06020 PF00814 Glycoprotease family OF401_06025 PF03747 ADP-ribosylglycohydrolase OF401_06035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OF401_06035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OF401_06040 PF00072 Response regulator receiver domain OF401_06045 PF00072 Response regulator receiver domain OF401_06050 PF01584 CheW-like domain OF401_06055 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OF401_06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_06060 PF02895 Signal transducing histidine kinase, homodimeric domain OF401_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_06060 PF01627 Hpt domain OF401_06060 PF00072 Response regulator receiver domain OF401_06060 PF01584 CheW-like domain OF401_06075 PF13302 Acetyltransferase (GNAT) domain OF401_06085 PF04542 Sigma-70 region 2 OF401_06085 PF08281 Sigma-70, region 4 OF401_06095 PF12450 von Willebrand factor OF401_06095 PF12034 Domain of unknown function (DUF3520) OF401_06095 PF00092 von Willebrand factor type A domain OF401_06100 PF01112 Asparaginase OF401_06105 PF03932 CutC family OF401_06110 PF00067 Cytochrome P450 OF401_06145 PF11867 Domain of unknown function (DUF3387) OF401_06145 PF18766 SWI2/SNF2 ATPase OF401_06145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) OF401_06160 PF02384 N-6 DNA Methylase OF401_06160 PF12161 HsdM N-terminal domain OF401_06195 PF01301 Glycosyl hydrolases family 35 OF401_06200 PF07971 Glycosyl hydrolase family 92 OF401_06200 PF17678 Glycosyl hydrolase family 92 N-terminal domain OF401_06210 PF14310 Fibronectin type III-like domain OF401_06210 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_06210 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_06210 PF07691 PA14 domain OF401_06220 PF00728 Glycosyl hydrolase family 20, catalytic domain OF401_06220 PF02838 Glycosyl hydrolase family 20, domain 2 OF401_06220 PF07691 PA14 domain OF401_06225 PF00704 Glycosyl hydrolases family 18 OF401_06225 PF01476 LysM domain OF401_06245 PF02685 Glucokinase OF401_06250 PF04452 RNA methyltransferase OF401_06255 PF00202 Aminotransferase class-III OF401_06260 PF00293 NUDIX domain OF401_06265 PF00459 Inositol monophosphatase family OF401_06270 PF03819 MazG nucleotide pyrophosphohydrolase domain OF401_06275 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OF401_06280 PF01145 SPFH domain / Band 7 family OF401_06280 PF16200 C-terminal region of band_7 OF401_06290 PF01571 Aminomethyltransferase folate-binding domain OF401_06290 PF08669 Glycine cleavage T-protein C-terminal barrel domain OF401_06295 PF01597 Glycine cleavage H-protein OF401_06330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_06330 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_06330 PF09317 Domain of unknown function (DUF1974) OF401_06330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_06340 PF00440 Bacterial regulatory proteins, tetR family OF401_06345 PF00593 TonB dependent receptor OF401_06345 PF07715 TonB-dependent Receptor Plug Domain OF401_06355 PF01430 Hsp33 protein OF401_06360 PF00912 Transglycosylase OF401_06365 PF00535 Glycosyl transferase family 2 OF401_06370 PF00571 CBS domain OF401_06370 PF00478 IMP dehydrogenase / GMP reductase domain OF401_06375 PF05170 AsmA family OF401_06380 PF03006 Haemolysin-III related OF401_06385 PF00009 Elongation factor Tu GTP binding domain OF401_06385 PF16658 Class II release factor RF3, C-terminal domain OF401_06390 PF01551 Peptidase family M23 OF401_06390 PF08460 Bacterial SH3 domain OF401_06395 PF00561 alpha/beta hydrolase fold OF401_06400 PF01053 Cys/Met metabolism PLP-dependent enzyme OF401_06405 PF00696 Amino acid kinase family OF401_06405 PF00742 Homoserine dehydrogenase OF401_06405 PF03447 Homoserine dehydrogenase, NAD binding domain OF401_06410 PF12697 Alpha/beta hydrolase family OF401_06420 PF03315 Serine dehydratase beta chain OF401_06420 PF03313 Serine dehydratase alpha chain OF401_06440 PF04264 YceI-like domain OF401_06445 PF17149 Periplasmic sensor domain found in signal transduction proteins OF401_06445 PF00672 HAMP domain OF401_06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_06445 PF00512 His Kinase A (phospho-acceptor) domain OF401_06445 PF01627 Hpt domain OF401_06445 PF00072 Response regulator receiver domain OF401_06450 PF00512 His Kinase A (phospho-acceptor) domain OF401_06450 PF17149 Periplasmic sensor domain found in signal transduction proteins OF401_06450 PF00672 HAMP domain OF401_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_06450 PF01627 Hpt domain OF401_06450 PF00072 Response regulator receiver domain OF401_06455 PF00072 Response regulator receiver domain OF401_06455 PF01627 Hpt domain OF401_06455 PF00512 His Kinase A (phospho-acceptor) domain OF401_06455 PF00672 HAMP domain OF401_06455 PF17149 Periplasmic sensor domain found in signal transduction proteins OF401_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_06460 PF07690 Major Facilitator Superfamily OF401_06470 PF01208 Uroporphyrinogen decarboxylase (URO-D) OF401_06480 PF01761 3-dehydroquinate synthase OF401_06485 PF01202 Shikimate kinase OF401_06490 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OF401_06490 PF01243 Pyridoxamine 5'-phosphate oxidase OF401_06500 PF04012 PspA/IM30 family OF401_06525 PF03738 Glutathionylspermidine synthase preATP-grasp OF401_06530 PF07690 Major Facilitator Superfamily OF401_06535 PF00376 MerR family regulatory protein OF401_06535 PF09278 MerR, DNA binding OF401_06560 PF04820 Tryptophan halogenase OF401_06585 PF00072 Response regulator receiver domain OF401_06585 PF01339 CheB methylesterase OF401_06595 PF00324 Amino acid permease OF401_06600 PF00196 Bacterial regulatory proteins, luxR family OF401_06605 PF00561 alpha/beta hydrolase fold OF401_06615 PF00544 Pectate lyase OF401_06620 PF00324 Amino acid permease OF401_06625 PF01654 Cytochrome bd terminal oxidase subunit I OF401_06630 PF02322 Cytochrome bd terminal oxidase subunit II OF401_06640 PF01769 Divalent cation transporter OF401_06640 PF03448 MgtE intracellular N domain OF401_06640 PF00571 CBS domain OF401_06645 PF05524 PEP-utilising enzyme, N-terminal OF401_06645 PF00391 PEP-utilising enzyme, mobile domain OF401_06645 PF02896 PEP-utilising enzyme, TIM barrel domain OF401_06650 PF00381 PTS HPr component phosphorylation site OF401_06660 PF03668 P-loop ATPase protein family OF401_06665 PF07475 HPr Serine kinase C-terminal domain OF401_06665 PF02603 HPr Serine kinase N terminus OF401_06670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OF401_06675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OF401_06680 PF04963 Sigma-54 factor, core binding domain OF401_06680 PF00309 Sigma-54 factor, Activator interacting domain (AID) OF401_06680 PF04552 Sigma-54, DNA binding domain OF401_06685 PF00005 ABC transporter OF401_06705 PF00571 CBS domain OF401_06705 PF01380 SIS domain OF401_06710 PF01722 BolA-like protein OF401_06715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OF401_06735 PF00551 Formyl transferase OF401_06745 PF02769 AIR synthase related protein, C-terminal domain OF401_06745 PF00586 AIR synthase related protein, N-terminal domain OF401_06755 PF01594 AI-2E family transporter OF401_06760 PF00308 Bacterial dnaA protein OF401_06765 PF00483 Nucleotidyl transferase OF401_06770 PF01636 Phosphotransferase enzyme family OF401_06780 PF07687 Peptidase dimerisation domain OF401_06780 PF01546 Peptidase family M20/M25/M40 OF401_06795 PF00258 Flavodoxin OF401_06795 PF00175 Oxidoreductase NAD-binding domain OF401_06795 PF00667 FAD binding domain OF401_06800 PF02424 ApbE family OF401_06825 PF13640 2OG-Fe(II) oxygenase superfamily OF401_06825 PF18331 PKHD-type hydroxylase C-terminal domain OF401_06830 PF07715 TonB-dependent Receptor Plug Domain OF401_06830 PF00593 TonB dependent receptor OF401_06835 PF00355 Rieske [2Fe-2S] domain OF401_06845 PF00266 Aminotransferase class-V OF401_06850 PF01458 Uncharacterized protein family (UPF0051) OF401_06855 PF00005 ABC transporter OF401_06860 PF01458 Uncharacterized protein family (UPF0051) OF401_06875 PF01965 DJ-1/PfpI family OF401_06905 PF14748 Pyrroline-5-carboxylate reductase dimerisation OF401_06905 PF03807 NADP oxidoreductase coenzyme F420-dependent OF401_06910 PF01168 Alanine racemase, N-terminal domain OF401_06915 PF00437 Type II/IV secretion system protein OF401_06920 PF00437 Type II/IV secretion system protein OF401_06940 PF13673 Acetyltransferase (GNAT) domain OF401_06940 PF03352 Methyladenine glycosylase OF401_06940 PF00958 GMP synthase C terminal domain OF401_06940 PF13302 Acetyltransferase (GNAT) domain OF401_06940 PF00117 Glutamine amidotransferase class-I OF401_06945 PF13687 Domain of unknown function (DUF4153) OF401_06950 PF02622 Uncharacterized ACR, COG1678 OF401_06955 PF03652 Holliday junction resolvase OF401_06960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OF401_06960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OF401_06965 PF02566 OsmC-like protein OF401_06975 PF02567 Phenazine biosynthesis-like protein OF401_06980 PF02567 Phenazine biosynthesis-like protein OF401_06985 PF01842 ACT domain OF401_06985 PF00696 Amino acid kinase family OF401_07000 PF08245 Mur ligase middle domain OF401_07010 PF00348 Polyprenyl synthetase OF401_07015 PF00436 Single-strand binding protein family OF401_07020 PF08463 EcoEI R protein C-terminal OF401_07020 PF00271 Helicase conserved C-terminal domain OF401_07020 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) OF401_07020 PF04851 Type III restriction enzyme, res subunit OF401_07025 PF12102 Domain of unknown function (DUF3578) OF401_07025 PF07728 AAA domain (dynein-related subfamily) OF401_07040 PF00563 EAL domain OF401_07040 PF01590 GAF domain OF401_07040 PF00990 Diguanylate cyclase, GGDEF domain OF401_07040 PF00360 Phytochrome region OF401_07045 PF00107 Zinc-binding dehydrogenase OF401_07045 PF08240 Alcohol dehydrogenase GroES-like domain OF401_07050 PF10518 TAT (twin-arginine translocation) pathway signal sequence OF401_07050 PF00111 2Fe-2S iron-sulfur cluster binding domain OF401_07050 PF01799 [2Fe-2S] binding domain OF401_07055 PF03450 CO dehydrogenase flavoprotein C-terminal domain OF401_07055 PF00941 FAD binding domain in molybdopterin dehydrogenase OF401_07060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OF401_07060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OF401_07065 PF02625 XdhC and CoxI family OF401_07065 PF13478 XdhC Rossmann domain OF401_07070 PF12804 MobA-like NTP transferase domain OF401_07100 PF04328 Selenoprotein, putative OF401_07105 PF02554 Carbon starvation protein CstA OF401_07105 PF13722 5TM C-terminal transporter carbon starvation CstA OF401_07110 PF02678 Pirin OF401_07110 PF05726 Pirin C-terminal cupin domain OF401_07130 PF02678 Pirin OF401_07130 PF05726 Pirin C-terminal cupin domain OF401_07135 PF04493 Endonuclease V OF401_07140 PF00300 Histidine phosphatase superfamily (branch 1) OF401_07150 PF01431 Peptidase family M13 OF401_07150 PF05649 Peptidase family M13 OF401_07155 PF13091 PLD-like domain OF401_07160 PF01339 CheB methylesterase OF401_07160 PF00072 Response regulator receiver domain OF401_07165 PF03705 CheR methyltransferase, all-alpha domain OF401_07165 PF01739 CheR methyltransferase, SAM binding domain OF401_07170 PF00563 EAL domain OF401_07170 PF00990 Diguanylate cyclase, GGDEF domain OF401_07170 PF13426 PAS domain OF401_07175 PF01584 CheW-like domain OF401_07180 PF00672 HAMP domain OF401_07180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_07185 PF01627 Hpt domain OF401_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_07185 PF02895 Signal transducing histidine kinase, homodimeric domain OF401_07185 PF09078 CheY binding OF401_07185 PF01584 CheW-like domain OF401_07195 PF03461 TRCF domain OF401_07195 PF17757 UvrB interaction domain OF401_07195 PF02559 CarD-like/TRCF domain OF401_07195 PF00270 DEAD/DEAH box helicase OF401_07195 PF00271 Helicase conserved C-terminal domain OF401_07210 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OF401_07215 PF00486 Transcriptional regulatory protein, C terminal OF401_07215 PF00072 Response regulator receiver domain OF401_07225 PF00672 HAMP domain OF401_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_07225 PF00512 His Kinase A (phospho-acceptor) domain OF401_07235 PF06123 Inner membrane protein CreD OF401_07265 PF00749 tRNA synthetases class I (E and Q), catalytic domain OF401_07270 PF01475 Ferric uptake regulator family OF401_07280 PF00529 HlyD membrane-fusion protein of T1SS OF401_07280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_07285 PF00873 AcrB/AcrD/AcrF family OF401_07290 PF02321 Outer membrane efflux protein OF401_07295 PF16859 Tetracyclin repressor-like, C-terminal domain OF401_07295 PF00440 Bacterial regulatory proteins, tetR family OF401_07300 PF00248 Aldo/keto reductase family OF401_07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_07305 PF03466 LysR substrate binding domain OF401_07315 PF06719 AraC-type transcriptional regulator N-terminus OF401_07315 PF12833 Helix-turn-helix domain OF401_07330 PF01483 Proprotein convertase P-domain OF401_07330 PF00082 Subtilase family OF401_07335 PF03466 LysR substrate binding domain OF401_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_07340 PF07690 Major Facilitator Superfamily OF401_07360 PF02225 PA domain OF401_07360 PF05922 Peptidase inhibitor I9 OF401_07360 PF13860 FlgD Ig-like domain OF401_07360 PF00082 Subtilase family OF401_07370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OF401_07370 PF01568 Molydopterin dinucleotide binding domain OF401_07370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OF401_07370 PF12838 4Fe-4S dicluster domain OF401_07370 PF00384 Molybdopterin oxidoreductase OF401_07380 PF01654 Cytochrome bd terminal oxidase subunit I OF401_07385 PF02322 Cytochrome bd terminal oxidase subunit II OF401_07400 PF00593 TonB dependent receptor OF401_07400 PF07715 TonB-dependent Receptor Plug Domain OF401_07415 PF00654 Voltage gated chloride channel OF401_07425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OF401_07425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OF401_07455 PF01494 FAD binding domain OF401_07480 PF00270 DEAD/DEAH box helicase OF401_07480 PF03880 DbpA RNA binding domain OF401_07480 PF00271 Helicase conserved C-terminal domain OF401_07485 PF00563 EAL domain OF401_07485 PF00990 Diguanylate cyclase, GGDEF domain OF401_07485 PF08448 PAS fold OF401_07490 PF00849 RNA pseudouridylate synthase OF401_07490 PF01479 S4 domain OF401_07505 PF03737 Aldolase/RraA OF401_07510 PF00144 Beta-lactamase OF401_07515 PF00999 Sodium/hydrogen exchanger family OF401_07525 PF00664 ABC transporter transmembrane region OF401_07525 PF00005 ABC transporter OF401_07560 PF01022 Bacterial regulatory protein, arsR family OF401_07565 PF03466 LysR substrate binding domain OF401_07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_07580 PF04070 Domain of unknown function (DUF378) OF401_07590 PF00085 Thioredoxin OF401_07600 PF08264 Anticodon-binding domain of tRNA OF401_07600 PF00133 tRNA synthetases class I (I, L, M and V) OF401_07600 PF13603 Leucyl-tRNA synthetase, Domain 2 OF401_07615 PF01467 Cytidylyltransferase-like OF401_07630 PF02590 Predicted SPOUT methyltransferase OF401_07640 PF04402 Protein of unknown function (DUF541) OF401_07645 PF02545 Maf-like protein OF401_07650 PF10150 Ribonuclease E/G family OF401_07650 PF00575 S1 RNA binding domain OF401_07655 PF13116 Protein of unknown function OF401_07655 PF13502 AsmA-like C-terminal region OF401_07665 PF01523 Putative modulator of DNA gyrase OF401_07670 PF04751 Protein of unknown function (DUF615) OF401_07675 PF01523 Putative modulator of DNA gyrase OF401_07695 PF00348 Polyprenyl synthetase OF401_07700 PF02609 Exonuclease VII small subunit OF401_07705 PF01171 PP-loop family OF401_07705 PF09179 TilS substrate binding domain OF401_07705 PF11734 TilS substrate C-terminal domain OF401_07710 PF00245 Alkaline phosphatase OF401_07715 PF00375 Sodium:dicarboxylate symporter family OF401_07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_07735 PF00512 His Kinase A (phospho-acceptor) domain OF401_07735 PF00989 PAS fold OF401_07740 PF02954 Bacterial regulatory protein, Fis family OF401_07740 PF00072 Response regulator receiver domain OF401_07740 PF00158 Sigma-54 interaction domain OF401_07765 PF00877 NlpC/P60 family OF401_07770 PF00877 NlpC/P60 family OF401_07775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OF401_07780 PF04235 Protein of unknown function (DUF418) OF401_07785 PF01266 FAD dependent oxidoreductase OF401_07790 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_07790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OF401_07810 PF01431 Peptidase family M13 OF401_07810 PF05649 Peptidase family M13 OF401_07815 PF01431 Peptidase family M13 OF401_07815 PF05649 Peptidase family M13 OF401_07835 PF07715 TonB-dependent Receptor Plug Domain OF401_07835 PF00593 TonB dependent receptor OF401_07840 PF10609 NUBPL iron-transfer P-loop NTPase OF401_07845 PF00692 dUTPase OF401_07865 PF01738 Dienelactone hydrolase family OF401_07870 PF02661 Fic/DOC family OF401_07875 PF04055 Radical SAM superfamily OF401_07875 PF18693 TRAM domain OF401_07875 PF00919 Uncharacterized protein family UPF0004 OF401_07880 PF01272 Transcription elongation factor, GreA/GreB, C-term OF401_07880 PF03449 Transcription elongation factor, N-terminal OF401_07895 PF00293 NUDIX domain OF401_07905 PF05872 Bacterial protein of unknown function (DUF853) OF401_07925 PF02666 Phosphatidylserine decarboxylase OF401_07930 PF02630 SCO1/SenC OF401_07935 PF05175 Methyltransferase small domain OF401_07945 PF01264 Chorismate synthase OF401_07950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OF401_07950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OF401_07955 PF01118 Semialdehyde dehydrogenase, NAD binding domain OF401_07955 PF02774 Semialdehyde dehydrogenase, dimerisation domain OF401_07970 PF01416 tRNA pseudouridine synthase OF401_07975 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OF401_07980 PF03466 LysR substrate binding domain OF401_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_07985 PF00291 Pyridoxal-phosphate dependent enzyme OF401_07995 PF00290 Tryptophan synthase alpha chain OF401_08000 PF01039 Carboxyl transferase domain OF401_08000 PF17848 Acetyl-coA carboxylase zinc finger domain OF401_08005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OF401_08005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OF401_08005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OF401_08005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OF401_08020 PF00563 EAL domain OF401_08020 PF00990 Diguanylate cyclase, GGDEF domain OF401_08020 PF03707 Bacterial signalling protein N terminal repeat OF401_08030 PF01152 Bacterial-like globin OF401_08040 PF00106 short chain dehydrogenase OF401_08045 PF00121 Triosephosphate isomerase OF401_08060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OF401_08065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OF401_08070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OF401_08075 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OF401_08085 PF10531 SLBB domain OF401_08085 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OF401_08085 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OF401_08090 PF00384 Molybdopterin oxidoreductase OF401_08090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OF401_08090 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal OF401_08095 PF00146 NADH dehydrogenase OF401_08100 PF12838 4Fe-4S dicluster domain OF401_08105 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OF401_08110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OF401_08115 PF00361 Proton-conducting membrane transporter OF401_08115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OF401_08120 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus OF401_08120 PF00361 Proton-conducting membrane transporter OF401_08125 PF00361 Proton-conducting membrane transporter OF401_08135 PF17384 RimP C-terminal SH3 domain OF401_08135 PF02576 RimP N-terminal domain OF401_08140 PF00575 S1 RNA binding domain OF401_08140 PF08529 NusA N-terminal domain OF401_08140 PF13184 NusA-like KH domain OF401_08145 PF11987 Translation-initiation factor 2 OF401_08145 PF00009 Elongation factor Tu GTP binding domain OF401_08145 PF08364 Bacterial translation initiation factor IF-2 associated region OF401_08145 PF04760 Translation initiation factor IF-2, N-terminal region OF401_08150 PF02033 Ribosome-binding factor A OF401_08155 PF16198 tRNA pseudouridylate synthase B C-terminal domain OF401_08155 PF01509 TruB family pseudouridylate synthase (N terminal domain) OF401_08155 PF09157 Pseudouridine synthase II TruB, C-terminal OF401_08160 PF00312 Ribosomal protein S15 OF401_08165 PF03725 3' exoribonuclease family, domain 2 OF401_08165 PF01138 3' exoribonuclease family, domain 1 OF401_08165 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OF401_08165 PF00013 KH domain OF401_08165 PF00575 S1 RNA binding domain OF401_08175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OF401_08175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OF401_08185 PF00731 AIR carboxylase OF401_08190 PF02222 ATP-grasp domain OF401_08190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OF401_08195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OF401_08195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OF401_08200 PF00462 Glutaredoxin OF401_08210 PF01914 MarC family integral membrane protein OF401_08215 PF00593 TonB dependent receptor OF401_08220 PF03641 Possible lysine decarboxylase OF401_08220 PF11892 Domain of unknown function (DUF3412) OF401_08220 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases OF401_08225 PF07963 Prokaryotic N-terminal methylation motif OF401_08245 PF05567 Neisseria PilC beta-propeller domain OF401_08260 PF00114 Pilin (bacterial filament) OF401_08260 PF07963 Prokaryotic N-terminal methylation motif OF401_08265 PF02151 UvrB/uvrC motif OF401_08265 PF00271 Helicase conserved C-terminal domain OF401_08265 PF04851 Type III restriction enzyme, res subunit OF401_08265 PF12344 Ultra-violet resistance protein B OF401_08265 PF17757 UvrB interaction domain OF401_08280 PF02534 Type IV secretory system Conjugative DNA transfer OF401_08300 PF03743 Bacterial conjugation TrbI-like protein OF401_08305 PF00437 Type II/IV secretion system protein OF401_08310 PF01464 Transglycosylase SLT domain OF401_08320 PF05101 Type IV secretory pathway, VirB3-like protein OF401_08325 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OF401_08340 PF00128 Alpha amylase, catalytic domain OF401_08350 PF01609 Transposase DDE domain OF401_08350 PF05598 Transposase domain (DUF772) OF401_08360 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OF401_08360 PF14508 Glycosyl-hydrolase 97 N-terminal OF401_08360 PF10566 Glycoside hydrolase 97 OF401_08370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OF401_08375 PF00686 Starch binding domain OF401_08375 PF00128 Alpha amylase, catalytic domain OF401_08380 PF00356 Bacterial regulatory proteins, lacI family OF401_08385 PF03129 Anticodon binding domain OF401_08385 PF02824 TGS domain OF401_08385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OF401_08385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OF401_08390 PF00707 Translation initiation factor IF-3, C-terminal domain OF401_08390 PF05198 Translation initiation factor IF-3, N-terminal domain OF401_08395 PF01632 Ribosomal protein L35 OF401_08400 PF00453 Ribosomal protein L20 OF401_08405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OF401_08405 PF01409 tRNA synthetases class II core domain (F) OF401_08410 PF03483 B3/4 domain OF401_08410 PF03484 tRNA synthetase B5 domain OF401_08410 PF03147 Ferredoxin-fold anticodon binding domain OF401_08410 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OF401_08410 PF01588 Putative tRNA binding domain OF401_08415 PF00216 Bacterial DNA-binding protein OF401_08420 PF13411 MerR HTH family regulatory protein OF401_08440 PF02397 Bacterial sugar transferase OF401_08460 PF00534 Glycosyl transferases group 1 OF401_08460 PF13439 Glycosyltransferase Family 4 OF401_08470 PF01943 Polysaccharide biosynthesis protein OF401_08485 PF03808 Glycosyl transferase WecB/TagA/CpsF family OF401_08500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OF401_08500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OF401_08510 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OF401_08530 PF02779 Transketolase, pyrimidine binding domain OF401_08530 PF02780 Transketolase, C-terminal domain OF401_08530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OF401_08540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_08540 PF12806 Acetyl-CoA dehydrogenase C-terminal like OF401_08540 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_08540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_08570 PF13188 PAS domain OF401_08570 PF08448 PAS fold OF401_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_08570 PF00512 His Kinase A (phospho-acceptor) domain OF401_08570 PF00072 Response regulator receiver domain OF401_08590 PF00893 Small Multidrug Resistance protein OF401_08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_08595 PF13426 PAS domain OF401_08595 PF00072 Response regulator receiver domain OF401_08605 PF04362 Bacterial Fe(2+) trafficking OF401_08610 PF00633 Helix-hairpin-helix motif OF401_08610 PF00730 HhH-GPD superfamily base excision DNA repair protein OF401_08610 PF14815 NUDIX domain OF401_08615 PF00448 SRP54-type protein, GTPase domain OF401_08615 PF02881 SRP54-type protein, helical bundle domain OF401_08625 PF05544 Proline racemase OF401_08630 PF01266 FAD dependent oxidoreductase OF401_08640 PF04324 BFD-like [2Fe-2S] binding domain OF401_08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_08645 PF00701 Dihydrodipicolinate synthetase family OF401_08650 PF00171 Aldehyde dehydrogenase family OF401_08655 PF01321 Creatinase/Prolidase N-terminal domain OF401_08655 PF00557 Metallopeptidase family M24 OF401_08675 PF13520 Amino acid permease OF401_08705 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OF401_08705 PF00326 Prolyl oligopeptidase family OF401_08715 PF07715 TonB-dependent Receptor Plug Domain OF401_08715 PF00593 TonB dependent receptor OF401_08740 PF05598 Transposase domain (DUF772) OF401_08760 PF01609 Transposase DDE domain OF401_08760 PF05598 Transposase domain (DUF772) OF401_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_08765 PF00183 Hsp90 protein OF401_08775 PF01467 Cytidylyltransferase-like OF401_08790 PF00037 4Fe-4S binding domain OF401_08800 PF00759 Glycosyl hydrolase family 9 OF401_08800 PF02927 Cellulase N-terminal ig-like domain OF401_08830 PF00202 Aminotransferase class-III OF401_08840 PF02547 Queuosine biosynthesis protein OF401_08845 PF01702 Queuine tRNA-ribosyltransferase OF401_08850 PF02699 Preprotein translocase subunit OF401_08855 PF02355 Protein export membrane protein OF401_08855 PF13721 SecD export protein N-terminal TM region OF401_08855 PF07549 SecD/SecF GG Motif OF401_08860 PF02355 Protein export membrane protein OF401_08860 PF07549 SecD/SecF GG Motif OF401_08890 PF00294 pfkB family carbohydrate kinase OF401_08895 PF02896 PEP-utilising enzyme, TIM barrel domain OF401_08895 PF00381 PTS HPr component phosphorylation site OF401_08895 PF05524 PEP-utilising enzyme, N-terminal OF401_08895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OF401_08895 PF00391 PEP-utilising enzyme, mobile domain OF401_08900 PF00356 Bacterial regulatory proteins, lacI family OF401_08910 PF00873 AcrB/AcrD/AcrF family OF401_08915 PF00529 HlyD membrane-fusion protein of T1SS OF401_08915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_08925 PF05088 Bacterial NAD-glutamate dehydrogenase OF401_08930 PF12833 Helix-turn-helix domain OF401_08935 PF00857 Isochorismatase family OF401_08940 PF07690 Major Facilitator Superfamily OF401_08945 PF00072 Response regulator receiver domain OF401_08950 PF00672 HAMP domain OF401_08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_08950 PF00512 His Kinase A (phospho-acceptor) domain OF401_08950 PF01627 Hpt domain OF401_08950 PF00072 Response regulator receiver domain OF401_08950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OF401_08955 PF04286 Protein of unknown function (DUF445) OF401_08965 PF00202 Aminotransferase class-III OF401_08970 PF07690 Major Facilitator Superfamily OF401_08975 PF02634 FdhD/NarQ family OF401_08980 PF00384 Molybdopterin oxidoreductase OF401_08990 PF00083 Sugar (and other) transporter OF401_08990 PF07690 Major Facilitator Superfamily OF401_08995 PF01814 Hemerythrin HHE cation binding domain OF401_09000 PF00072 Response regulator receiver domain OF401_09000 PF00990 Diguanylate cyclase, GGDEF domain OF401_09005 PF01266 FAD dependent oxidoreductase OF401_09010 PF00120 Glutamine synthetase, catalytic domain OF401_09015 PF07722 Peptidase C26 OF401_09020 PF00120 Glutamine synthetase, catalytic domain OF401_09025 PF00202 Aminotransferase class-III OF401_09030 PF13416 Bacterial extracellular solute-binding protein OF401_09035 PF13533 Biotin-lipoyl like OF401_09040 PF07690 Major Facilitator Superfamily OF401_09045 PF02321 Outer membrane efflux protein OF401_09050 PF08402 TOBE domain OF401_09050 PF00005 ABC transporter OF401_09060 PF00528 Binding-protein-dependent transport system inner membrane component OF401_09065 PF00528 Binding-protein-dependent transport system inner membrane component OF401_09075 PF00171 Aldehyde dehydrogenase family OF401_09090 PF00571 CBS domain OF401_09090 PF03471 Transporter associated domain OF401_09100 PF02130 Uncharacterized protein family UPF0054 OF401_09110 PF02562 PhoH-like protein OF401_09115 PF00919 Uncharacterized protein family UPF0004 OF401_09115 PF01938 TRAM domain OF401_09115 PF04055 Radical SAM superfamily OF401_09120 PF02798 Glutathione S-transferase, N-terminal domain OF401_09120 PF14497 Glutathione S-transferase, C-terminal domain OF401_09130 PF01464 Transglycosylase SLT domain OF401_09135 PF00355 Rieske [2Fe-2S] domain OF401_09135 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal OF401_09140 PF00032 Cytochrome b(C-terminal)/b6/petD OF401_09140 PF00033 Cytochrome b/b6/petB OF401_09145 PF02167 Cytochrome C1 family OF401_09150 PF00043 Glutathione S-transferase, C-terminal domain OF401_09150 PF02798 Glutathione S-transferase, N-terminal domain OF401_09155 PF04386 Stringent starvation protein B OF401_09170 PF00270 DEAD/DEAH box helicase OF401_09170 PF08494 DEAD/H associated OF401_09170 PF00271 Helicase conserved C-terminal domain OF401_09175 PF02245 Methylpurine-DNA glycosylase (MPG) OF401_09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_09180 PF02203 Tar ligand binding domain homologue OF401_09180 PF00672 HAMP domain OF401_09185 PF01584 CheW-like domain OF401_09230 PF01612 3'-5' exonuclease OF401_09230 PF00570 HRDC domain OF401_09235 PF03781 Sulfatase-modifying factor enzyme 1 OF401_09245 PF13742 OB-fold nucleic acid binding domain OF401_09245 PF02601 Exonuclease VII, large subunit OF401_09250 PF08331 Domain of unknown function (DUF1730) OF401_09255 PF01256 Carbohydrate kinase OF401_09255 PF03853 YjeF-related protein N-terminus OF401_09265 PF01520 N-acetylmuramoyl-L-alanine amidase OF401_09265 PF11741 AMIN domain OF401_09270 PF08676 MutL C terminal dimerisation domain OF401_09270 PF01119 DNA mismatch repair protein, C-terminal domain OF401_09285 PF05233 PHB accumulation regulatory domain OF401_09285 PF07879 PHB/PHA accumulation regulator DNA-binding domain OF401_09290 PF00106 short chain dehydrogenase OF401_09295 PF00749 tRNA synthetases class I (E and Q), catalytic domain OF401_09300 PF01435 Peptidase family M48 OF401_09305 PF00563 EAL domain OF401_09305 PF03707 Bacterial signalling protein N terminal repeat OF401_09305 PF00990 Diguanylate cyclase, GGDEF domain OF401_09315 PF07152 YaeQ protein OF401_09320 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 OF401_09325 PF00313 'Cold-shock' DNA-binding domain OF401_09335 PF07859 alpha/beta hydrolase fold OF401_09340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OF401_09345 PF00156 Phosphoribosyl transferase domain OF401_09350 PF03880 DbpA RNA binding domain OF401_09350 PF00270 DEAD/DEAH box helicase OF401_09350 PF00271 Helicase conserved C-terminal domain OF401_09355 PF00005 ABC transporter OF401_09355 PF16326 ABC transporter C-terminal domain OF401_09355 PF12848 ABC transporter OF401_09365 PF00545 ribonuclease OF401_09370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OF401_09370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OF401_09375 PF00459 Inositol monophosphatase family OF401_09380 PF00588 SpoU rRNA Methylase family OF401_09390 PF00990 Diguanylate cyclase, GGDEF domain OF401_09390 PF13188 PAS domain OF401_09390 PF00563 EAL domain OF401_09390 PF03707 Bacterial signalling protein N terminal repeat OF401_09395 PF04055 Radical SAM superfamily OF401_09400 PF01132 Elongation factor P (EF-P) OB domain OF401_09400 PF08207 Elongation factor P (EF-P) KOW-like domain OF401_09400 PF09285 Elongation factor P, C-terminal OF401_09410 PF01979 Amidohydrolase family OF401_09420 PF13419 Haloacid dehalogenase-like hydrolase OF401_09430 PF00295 Glycosyl hydrolases family 28 OF401_09450 PF00753 Metallo-beta-lactamase superfamily OF401_09460 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OF401_09465 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OF401_09475 PF08460 Bacterial SH3 domain OF401_09475 PF01551 Peptidase family M23 OF401_09480 PF01979 Amidohydrolase family OF401_09485 PF01809 Putative membrane protein insertion efficiency factor OF401_09490 PF01258 Prokaryotic dksA/traR C4-type zinc finger OF401_09505 PF07690 Major Facilitator Superfamily OF401_09510 PF02657 Fe-S metabolism associated domain OF401_09515 PF09190 DALR domain OF401_09515 PF01406 tRNA synthetases class I (C) catalytic domain OF401_09525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OF401_09525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OF401_09535 PF00764 Arginosuccinate synthase OF401_09540 PF07687 Peptidase dimerisation domain OF401_09540 PF01546 Peptidase family M20/M25/M40 OF401_09545 PF00696 Amino acid kinase family OF401_09545 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase OF401_09555 PF01118 Semialdehyde dehydrogenase, NAD binding domain OF401_09560 PF00206 Lyase OF401_09575 PF01472 PUA domain OF401_09575 PF00696 Amino acid kinase family OF401_09580 PF00171 Aldehyde dehydrogenase family OF401_09590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) OF401_09590 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain OF401_09610 PF02322 Cytochrome bd terminal oxidase subunit II OF401_09615 PF01654 Cytochrome bd terminal oxidase subunit I OF401_09620 PF00005 ABC transporter OF401_09620 PF00664 ABC transporter transmembrane region OF401_09625 PF00664 ABC transporter transmembrane region OF401_09625 PF00005 ABC transporter OF401_09635 PF00561 alpha/beta hydrolase fold OF401_09650 PF03918 Cytochrome C biogenesis protein OF401_09655 PF08534 Redoxin OF401_09660 PF01578 Cytochrome C assembly protein OF401_09660 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OF401_09665 PF03100 CcmE OF401_09675 PF01578 Cytochrome C assembly protein OF401_09680 PF03379 CcmB protein OF401_09685 PF00005 ABC transporter OF401_09690 PF00155 Aminotransferase class I and II OF401_09695 PF00795 Carbon-nitrogen hydrolase OF401_09715 PF00849 RNA pseudouridylate synthase OF401_09715 PF01479 S4 domain OF401_09720 PF04079 Segregation and condensation complex subunit ScpB OF401_09725 PF02616 Segregation and condensation protein ScpA OF401_09730 PF03795 YCII-related domain OF401_09740 PF00356 Bacterial regulatory proteins, lacI family OF401_09755 PF13416 Bacterial extracellular solute-binding protein OF401_09760 PF00528 Binding-protein-dependent transport system inner membrane component OF401_09765 PF00528 Binding-protein-dependent transport system inner membrane component OF401_09790 PF00795 Carbon-nitrogen hydrolase OF401_09795 PF04371 Porphyromonas-type peptidyl-arginine deiminase OF401_09805 PF00444 Ribosomal protein L36 OF401_09810 PF02224 Cytidylate kinase OF401_09815 PF00575 S1 RNA binding domain OF401_09820 PF00216 Bacterial DNA-binding protein OF401_09830 PF18073 Rubredoxin metal binding domain OF401_09835 PF00953 Glycosyl transferase family 4 OF401_09840 PF02719 Polysaccharide biosynthesis protein OF401_09845 PF00483 Nucleotidyl transferase OF401_09850 PF02254 TrkA-N domain OF401_09850 PF00999 Sodium/hydrogen exchanger family OF401_09860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OF401_09860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OF401_09865 PF00478 IMP dehydrogenase / GMP reductase domain OF401_09865 PF00571 CBS domain OF401_09875 PF00117 Glutamine amidotransferase class-I OF401_09875 PF00958 GMP synthase C terminal domain OF401_09875 PF02540 NAD synthase OF401_09890 PF00196 Bacterial regulatory proteins, luxR family OF401_09890 PF00072 Response regulator receiver domain OF401_09895 PF13492 GAF domain OF401_09895 PF07730 Histidine kinase OF401_09895 PF13185 GAF domain OF401_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_09905 PF00857 Isochorismatase family OF401_09915 PF07969 Amidohydrolase family OF401_09920 PF05977 Transmembrane secretion effector OF401_09925 PF00561 alpha/beta hydrolase fold OF401_09930 PF01566 Natural resistance-associated macrophage protein OF401_09935 PF02742 Iron dependent repressor, metal binding and dimerisation domain OF401_09935 PF01325 Iron dependent repressor, N-terminal DNA binding domain OF401_09940 PF14437 MafB19-like deaminase OF401_09945 PF00929 Exonuclease OF401_09950 PF00924 Mechanosensitive ion channel OF401_09950 PF05552 Conserved TM helix OF401_09955 PF00391 PEP-utilising enzyme, mobile domain OF401_09955 PF02896 PEP-utilising enzyme, TIM barrel domain OF401_09955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OF401_09960 PF03618 Kinase/pyrophosphorylase OF401_09980 PF01066 CDP-alcohol phosphatidyltransferase OF401_09990 PF00561 alpha/beta hydrolase fold OF401_10005 PF00355 Rieske [2Fe-2S] domain OF401_10005 PF01266 FAD dependent oxidoreductase OF401_10015 PF16921 Tex protein YqgF-like domain OF401_10015 PF09371 Tex-like protein N-terminal domain OF401_10015 PF00575 S1 RNA binding domain OF401_10015 PF17674 HHH domain OF401_10020 PF08448 PAS fold OF401_10020 PF00990 Diguanylate cyclase, GGDEF domain OF401_10020 PF00563 EAL domain OF401_10020 PF08447 PAS fold OF401_10035 PF13356 Arm DNA-binding domain OF401_10035 PF00589 Phage integrase family OF401_10100 PF00034 Cytochrome c OF401_10110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_10115 PF00873 AcrB/AcrD/AcrF family OF401_10120 PF00873 AcrB/AcrD/AcrF family OF401_10125 PF01081 KDPG and KHG aldolase OF401_10130 PF00920 Dehydratase family OF401_10135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OF401_10140 PF02685 Glucokinase OF401_10145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OF401_10145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OF401_10150 PF00005 ABC transporter OF401_10150 PF17912 MalK OB fold domain OF401_10155 PF01571 Aminomethyltransferase folate-binding domain OF401_10165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OF401_10170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OF401_10175 PF02910 Fumarate reductase flavoprotein C-term OF401_10175 PF00890 FAD binding domain OF401_10185 PF13085 2Fe-2S iron-sulfur cluster binding domain OF401_10190 PF03937 Flavinator of succinate dehydrogenase OF401_10200 PF02687 FtsX-like permease family OF401_10200 PF12704 MacB-like periplasmic core domain OF401_10205 PF00005 ABC transporter OF401_10215 PF03772 Competence protein OF401_10215 PF00753 Metallo-beta-lactamase superfamily OF401_10220 PF01618 MotA/TolQ/ExbB proton channel family OF401_10230 PF00664 ABC transporter transmembrane region OF401_10230 PF00005 ABC transporter OF401_10235 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OF401_10240 PF02348 Cytidylyltransferase OF401_10245 PF01451 Low molecular weight phosphotyrosine protein phosphatase OF401_10255 PF01541 GIY-YIG catalytic domain OF401_10255 PF02151 UvrB/uvrC motif OF401_10255 PF08459 UvrC Helix-hairpin-helix N-terminal OF401_10260 PF01066 CDP-alcohol phosphatidyltransferase OF401_10280 PF04055 Radical SAM superfamily OF401_10280 PF06969 HemN C-terminal domain OF401_10290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OF401_10290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OF401_10290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OF401_10300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OF401_10310 PF17773 UPF0176 acylphosphatase like domain OF401_10310 PF00581 Rhodanese-like domain OF401_10315 PF00072 Response regulator receiver domain OF401_10315 PF00196 Bacterial regulatory proteins, luxR family OF401_10325 PF12111 Polyribonucleotide phosphorylase C terminal OF401_10325 PF10150 Ribonuclease E/G family OF401_10325 PF00575 S1 RNA binding domain OF401_10330 PF01479 S4 domain OF401_10330 PF00849 RNA pseudouridylate synthase OF401_10335 PF02535 ZIP Zinc transporter OF401_10345 PF01329 Pterin 4 alpha carbinolamine dehydratase OF401_10350 PF01106 NifU-like domain OF401_10380 PF02303 Helix-destabilising protein OF401_10385 PF17091 Inovirus G7P protein OF401_10465 PF17091 Inovirus G7P protein OF401_10505 PF05598 Transposase domain (DUF772) OF401_10515 PF00561 alpha/beta hydrolase fold OF401_10525 PF04397 LytTr DNA-binding domain OF401_10525 PF00072 Response regulator receiver domain OF401_10535 PF10091 Putative glucoamylase OF401_10535 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain OF401_10535 PF06165 Glycosyltransferase family 36 OF401_10540 PF00512 His Kinase A (phospho-acceptor) domain OF401_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_10540 PF08448 PAS fold OF401_10540 PF13188 PAS domain OF401_10540 PF00072 Response regulator receiver domain OF401_10545 PF00072 Response regulator receiver domain OF401_10545 PF13426 PAS domain OF401_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_10550 PF00672 HAMP domain OF401_10550 PF02203 Tar ligand binding domain homologue OF401_10550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_10580 PF02203 Tar ligand binding domain homologue OF401_10580 PF00672 HAMP domain OF401_10585 PF07715 TonB-dependent Receptor Plug Domain OF401_10585 PF07660 Secretin and TonB N terminus short domain OF401_10585 PF00593 TonB dependent receptor OF401_10620 PF01638 HxlR-like helix-turn-helix OF401_10635 PF02630 SCO1/SenC OF401_10650 PF01431 Peptidase family M13 OF401_10650 PF05649 Peptidase family M13 OF401_10665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OF401_10670 PF07995 Glucose / Sorbosone dehydrogenase OF401_10680 PF00512 His Kinase A (phospho-acceptor) domain OF401_10680 PF08446 PAS fold OF401_10680 PF00360 Phytochrome region OF401_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_10680 PF01590 GAF domain OF401_10695 PF00561 alpha/beta hydrolase fold OF401_10705 PF00082 Subtilase family OF401_10705 PF03797 Autotransporter beta-domain OF401_10710 PF12951 Passenger-associated-transport-repeat OF401_10710 PF12951 Passenger-associated-transport-repeat OF401_10715 PF08448 PAS fold OF401_10715 PF00563 EAL domain OF401_10715 PF00990 Diguanylate cyclase, GGDEF domain OF401_10715 PF08447 PAS fold OF401_10725 PF01339 CheB methylesterase OF401_10725 PF00072 Response regulator receiver domain OF401_10730 PF05974 Domain of unknown function (DUF892) OF401_10745 PF01266 FAD dependent oxidoreductase OF401_10755 PF00483 Nucleotidyl transferase OF401_10765 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase OF401_10780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OF401_10785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OF401_10785 PF01568 Molydopterin dinucleotide binding domain OF401_10785 PF00384 Molybdopterin oxidoreductase OF401_10785 PF04324 BFD-like [2Fe-2S] binding domain OF401_10790 PF11723 Homotrimeric ring hydroxylase OF401_10790 PF00355 Rieske [2Fe-2S] domain OF401_10795 PF04324 BFD-like [2Fe-2S] binding domain OF401_10795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OF401_10795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OF401_10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_10795 PF18267 Rubredoxin NAD+ reductase C-terminal domain OF401_10800 PF07690 Major Facilitator Superfamily OF401_10810 PF03861 ANTAR domain OF401_10810 PF00072 Response regulator receiver domain OF401_10815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OF401_10815 PF10414 Sirohaem synthase dimerisation region OF401_10815 PF14824 Sirohaem biosynthesis protein central OF401_10825 PF12804 MobA-like NTP transferase domain OF401_10830 PF00994 Probable molybdopterin binding domain OF401_10830 PF03454 MoeA C-terminal region (domain IV) OF401_10830 PF03453 MoeA N-terminal region (domain I and II) OF401_10840 PF03372 Endonuclease/Exonuclease/phosphatase family OF401_10850 PF00107 Zinc-binding dehydrogenase OF401_10850 PF13823 Alcohol dehydrogenase GroES-associated OF401_10850 PF08240 Alcohol dehydrogenase GroES-like domain OF401_10865 PF00067 Cytochrome P450 OF401_10870 PF00106 short chain dehydrogenase OF401_10885 PF00899 ThiF family OF401_10890 PF00994 Probable molybdopterin binding domain OF401_10890 PF03454 MoeA C-terminal region (domain IV) OF401_10890 PF03453 MoeA N-terminal region (domain I and II) OF401_10895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OF401_10895 PF01926 50S ribosome-binding GTPase OF401_10900 PF01011 PQQ enzyme repeat OF401_10900 PF13360 PQQ-like domain OF401_10910 PF13464 Domain of unknown function (DUF4115) OF401_10920 PF04055 Radical SAM superfamily OF401_10925 PF00334 Nucleoside diphosphate kinase OF401_10935 PF00378 Enoyl-CoA hydratase/isomerase OF401_10935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OF401_10935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OF401_10940 PF02803 Thiolase, C-terminal domain OF401_10940 PF00108 Thiolase, N-terminal domain OF401_10945 PF00654 Voltage gated chloride channel OF401_10950 PF00004 ATPase family associated with various cellular activities (AAA) OF401_10950 PF16193 AAA C-terminal domain OF401_10950 PF12002 MgsA AAA+ ATPase C terminal OF401_10960 PF03548 Outer membrane lipoprotein carrier protein LolA OF401_10970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OF401_10970 PF17854 FtsK alpha domain OF401_10970 PF09397 Ftsk gamma domain OF401_10970 PF01580 FtsK/SpoIIIE family OF401_10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_10985 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OF401_10990 PF01176 Translation initiation factor 1A / IF-1 OF401_10995 PF00004 ATPase family associated with various cellular activities (AAA) OF401_10995 PF07724 AAA domain (Cdc48 subfamily) OF401_10995 PF17871 AAA lid domain OF401_10995 PF02861 Clp amino terminal domain, pathogenicity island component OF401_10995 PF10431 C-terminal, D2-small domain, of ClpB protein OF401_11000 PF02617 ATP-dependent Clp protease adaptor protein ClpS OF401_11005 PF00293 NUDIX domain OF401_11015 PF04356 Protein of unknown function (DUF489) OF401_11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11020 PF00672 HAMP domain OF401_11020 PF12729 Four helix bundle sensory module for signal transduction OF401_11030 PF01609 Transposase DDE domain OF401_11030 PF05598 Transposase domain (DUF772) OF401_11035 PF00563 EAL domain OF401_11035 PF03707 Bacterial signalling protein N terminal repeat OF401_11035 PF00990 Diguanylate cyclase, GGDEF domain OF401_11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11040 PF07730 Histidine kinase OF401_11045 PF03707 Bacterial signalling protein N terminal repeat OF401_11045 PF00990 Diguanylate cyclase, GGDEF domain OF401_11045 PF00563 EAL domain OF401_11050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11050 PF00512 His Kinase A (phospho-acceptor) domain OF401_11070 PF01584 CheW-like domain OF401_11070 PF00072 Response regulator receiver domain OF401_11080 PF00460 Flagella basal body rod protein OF401_11080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OF401_11085 PF03963 Flagellar hook capping protein - N-terminal region OF401_11090 PF07559 Flagellar basal body protein FlaE OF401_11090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OF401_11090 PF00460 Flagella basal body rod protein OF401_11095 PF00460 Flagella basal body rod protein OF401_11095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OF401_11105 PF00460 Flagella basal body rod protein OF401_11105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OF401_11110 PF02107 Flagellar L-ring protein OF401_11115 PF02119 Flagellar P-ring protein OF401_11120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OF401_11120 PF10135 Rod binding protein OF401_11125 PF07196 Flagellin hook IN motif OF401_11125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OF401_11130 PF00669 Bacterial flagellin N-terminal helical region OF401_11135 PF00669 Bacterial flagellin N-terminal helical region OF401_11135 PF00700 Bacterial flagellin C-terminal helical region OF401_11140 PF02465 Flagellar hook-associated protein 2 N-terminus OF401_11140 PF07196 Flagellin hook IN motif OF401_11140 PF07195 Flagellar hook-associated protein 2 C-terminus OF401_11145 PF02561 Flagellar protein FliS OF401_11160 PF00196 Bacterial regulatory proteins, luxR family OF401_11160 PF00072 Response regulator receiver domain OF401_11165 PF04552 Sigma-54, DNA binding domain OF401_11165 PF00309 Sigma-54 factor, Activator interacting domain (AID) OF401_11165 PF04963 Sigma-54 factor, core binding domain OF401_11170 PF01339 CheB methylesterase OF401_11170 PF00072 Response regulator receiver domain OF401_11175 PF06490 Flagellar regulatory protein FleQ OF401_11175 PF02954 Bacterial regulatory protein, Fis family OF401_11175 PF00158 Sigma-54 interaction domain OF401_11180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OF401_11200 PF00535 Glycosyl transferase family 2 OF401_11205 PF02049 Flagellar hook-basal body complex protein FliE OF401_11210 PF01514 Secretory protein of YscJ/FliF family OF401_11210 PF08345 Flagellar M-ring protein C-terminal OF401_11215 PF14841 FliG middle domain OF401_11215 PF01706 FliG C-terminal domain OF401_11215 PF14842 FliG N-terminal domain OF401_11225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OF401_11225 PF18269 T3SS EscN ATPase C-terminal domain OF401_11245 PF02154 Flagellar motor switch protein FliM OF401_11245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OF401_11250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OF401_11255 PF04347 Flagellar biosynthesis protein, FliO OF401_11260 PF00813 FliP family OF401_11270 PF01313 Bacterial export proteins, family 3 OF401_11275 PF01311 Bacterial export proteins, family 1 OF401_11280 PF00990 Diguanylate cyclase, GGDEF domain OF401_11285 PF00990 Diguanylate cyclase, GGDEF domain OF401_11290 PF00563 EAL domain OF401_11290 PF00990 Diguanylate cyclase, GGDEF domain OF401_11290 PF03707 Bacterial signalling protein N terminal repeat OF401_11295 PF01312 FlhB HrpN YscU SpaS Family OF401_11300 PF00771 FHIPEP family OF401_11305 PF00448 SRP54-type protein, GTPase domain OF401_11310 PF10609 NUBPL iron-transfer P-loop NTPase OF401_11315 PF04542 Sigma-70 region 2 OF401_11315 PF04539 Sigma-70 region 3 OF401_11315 PF04545 Sigma-70, region 4 OF401_11320 PF00072 Response regulator receiver domain OF401_11325 PF04344 Chemotaxis phosphatase, CheZ OF401_11330 PF02895 Signal transducing histidine kinase, homodimeric domain OF401_11330 PF01584 CheW-like domain OF401_11330 PF01627 Hpt domain OF401_11330 PF00072 Response regulator receiver domain OF401_11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11350 PF00144 Beta-lactamase OF401_11420 PF01618 MotA/TolQ/ExbB proton channel family OF401_11425 PF13677 Membrane MotB of proton-channel complex MotA/MotB OF401_11425 PF00691 OmpA family OF401_11430 PF13614 AAA domain OF401_11435 PF01584 CheW-like domain OF401_11445 PF00072 Response regulator receiver domain OF401_11450 PF01584 CheW-like domain OF401_11450 PF09078 CheY binding OF401_11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11450 PF01627 Hpt domain OF401_11450 PF02895 Signal transducing histidine kinase, homodimeric domain OF401_11455 PF00672 HAMP domain OF401_11455 PF02203 Tar ligand binding domain homologue OF401_11455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11465 PF00672 HAMP domain OF401_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11465 PF02203 Tar ligand binding domain homologue OF401_11470 PF00672 HAMP domain OF401_11470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11470 PF02203 Tar ligand binding domain homologue OF401_11475 PF00672 HAMP domain OF401_11475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11475 PF02203 Tar ligand binding domain homologue OF401_11480 PF12794 Mechanosensitive ion channel inner membrane domain 1 OF401_11480 PF12795 Mechanosensitive ion channel porin domain OF401_11480 PF00924 Mechanosensitive ion channel OF401_11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11485 PF02203 Tar ligand binding domain homologue OF401_11485 PF00672 HAMP domain OF401_11490 PF00672 HAMP domain OF401_11490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11490 PF02203 Tar ligand binding domain homologue OF401_11495 PF02203 Tar ligand binding domain homologue OF401_11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11495 PF00672 HAMP domain OF401_11505 PF02203 Tar ligand binding domain homologue OF401_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11505 PF00672 HAMP domain OF401_11510 PF07317 Flagellar regulator YcgR OF401_11510 PF07238 PilZ domain OF401_11515 PF01584 CheW-like domain OF401_11525 PF00672 HAMP domain OF401_11525 PF02203 Tar ligand binding domain homologue OF401_11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_11530 PF03705 CheR methyltransferase, all-alpha domain OF401_11530 PF01739 CheR methyltransferase, SAM binding domain OF401_11535 PF03975 CheD chemotactic sensory transduction OF401_11540 PF01339 CheB methylesterase OF401_11540 PF00072 Response regulator receiver domain OF401_11545 PF00990 Diguanylate cyclase, GGDEF domain OF401_11545 PF03707 Bacterial signalling protein N terminal repeat OF401_11545 PF00563 EAL domain OF401_11550 PF00561 alpha/beta hydrolase fold OF401_11555 PF06434 Aconitate hydratase 2 N-terminus OF401_11555 PF11791 Aconitate B N-terminal domain OF401_11555 PF00330 Aconitase family (aconitate hydratase) OF401_11570 PF00330 Aconitase family (aconitate hydratase) OF401_11570 PF00694 Aconitase C-terminal domain OF401_11580 PF13193 AMP-binding enzyme C-terminal domain OF401_11580 PF00501 AMP-binding enzyme OF401_11585 PF00378 Enoyl-CoA hydratase/isomerase OF401_11590 PF01627 Hpt domain OF401_11590 PF00072 Response regulator receiver domain OF401_11590 PF00512 His Kinase A (phospho-acceptor) domain OF401_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_11595 PF00512 His Kinase A (phospho-acceptor) domain OF401_11595 PF01627 Hpt domain OF401_11595 PF00072 Response regulator receiver domain OF401_11600 PF00072 Response regulator receiver domain OF401_11605 PF00152 tRNA synthetases class II (D, K and N) OF401_11605 PF01336 OB-fold nucleic acid binding domain OF401_11615 PF04397 LytTr DNA-binding domain OF401_11615 PF00072 Response regulator receiver domain OF401_11635 PF01368 DHH family OF401_11635 PF02272 DHHA1 domain OF401_11635 PF17768 RecJ OB domain OF401_11645 PF01272 Transcription elongation factor, GreA/GreB, C-term OF401_11645 PF03449 Transcription elongation factor, N-terminal OF401_11650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OF401_11650 PF02142 MGS-like domain OF401_11650 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OF401_11660 PF00117 Glutamine amidotransferase class-I OF401_11660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OF401_11665 PF01113 Dihydrodipicolinate reductase, N-terminus OF401_11665 PF05173 Dihydrodipicolinate reductase, C-terminus OF401_11670 PF03473 MOSC domain OF401_11670 PF03475 3-alpha domain OF401_11675 PF00155 Aminotransferase class I and II OF401_11690 PF02421 Ferrous iron transport protein B OF401_11690 PF07664 Ferrous iron transport protein B C terminus OF401_11690 PF07670 Nucleoside recognition OF401_11700 PF00378 Enoyl-CoA hydratase/isomerase OF401_11705 PF00682 HMGL-like OF401_11710 PF00106 short chain dehydrogenase OF401_11715 PF09285 Elongation factor P, C-terminal OF401_11715 PF08207 Elongation factor P (EF-P) KOW-like domain OF401_11715 PF01132 Elongation factor P (EF-P) OB domain OF401_11735 PF01565 FAD binding domain OF401_11735 PF02913 FAD linked oxidases, C-terminal domain OF401_11740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OF401_11740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OF401_11755 PF13520 Amino acid permease OF401_11760 PF13520 Amino acid permease OF401_11765 PF00596 Class II Aldolase and Adducin N-terminal domain OF401_11770 PF03079 ARD/ARD' family OF401_11790 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase OF401_11790 PF01502 Phosphoribosyl-AMP cyclohydrolase OF401_11795 PF00977 Histidine biosynthesis protein OF401_11800 PF00977 Histidine biosynthesis protein OF401_11805 PF00117 Glutamine amidotransferase class-I OF401_11810 PF00475 Imidazoleglycerol-phosphate dehydratase OF401_11815 PF00155 Aminotransferase class I and II OF401_11820 PF00815 Histidinol dehydrogenase OF401_11825 PF08029 HisG, C-terminal domain OF401_11825 PF01634 ATP phosphoribosyltransferase OF401_11835 PF13393 Histidyl-tRNA synthetase OF401_11835 PF03129 Anticodon binding domain OF401_11840 PF00027 Cyclic nucleotide-binding domain OF401_11840 PF13545 Crp-like helix-turn-helix domain OF401_11850 PF00291 Pyridoxal-phosphate dependent enzyme OF401_11850 PF14821 Threonine synthase N terminus OF401_11860 PF08544 GHMP kinases C terminal OF401_11860 PF00288 GHMP kinases N terminal domain OF401_11865 PF00696 Amino acid kinase family OF401_11865 PF01842 ACT domain OF401_11865 PF13840 ACT domain OF401_11865 PF00742 Homoserine dehydrogenase OF401_11865 PF03447 Homoserine dehydrogenase, NAD binding domain OF401_11900 PF05860 haemagglutination activity domain OF401_11900 PF04829 Pre-toxin domain with VENN motif OF401_11900 PF13332 Hemagglutinin repeat OF401_11905 PF08479 POTRA domain, ShlB-type OF401_11905 PF17287 POTRA domain OF401_11905 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB OF401_11915 PF00171 Aldehyde dehydrogenase family OF401_11930 PF01180 Dihydroorotate dehydrogenase OF401_11935 PF01565 FAD binding domain OF401_11935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OF401_11940 PF00892 EamA-like transporter family OF401_11945 PF01177 Asp/Glu/Hydantoin racemase OF401_11950 PF07690 Major Facilitator Superfamily OF401_11955 PF01569 PAP2 superfamily OF401_11960 PF04551 GcpE protein OF401_11970 PF00072 Response regulator receiver domain OF401_11975 PF00150 Cellulase (glycosyl hydrolase family 5) OF401_11975 PF02013 Cellulose or protein binding domain OF401_11980 PF00360 Phytochrome region OF401_11980 PF00990 Diguanylate cyclase, GGDEF domain OF401_11980 PF01590 GAF domain OF401_11980 PF00563 EAL domain OF401_11985 PF00474 Sodium:solute symporter family OF401_11990 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_11990 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_11990 PF14310 Fibronectin type III-like domain OF401_12005 PF00342 Phosphoglucose isomerase OF401_12010 PF02261 Aspartate decarboxylase OF401_12015 PF02569 Pantoate-beta-alanine ligase OF401_12020 PF02548 Ketopantoate hydroxymethyltransferase OF401_12025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OF401_12030 PF01743 Poly A polymerase head domain OF401_12030 PF12626 Polymerase A arginine-rich C-terminus OF401_12030 PF12627 Probable RNA and SrmB- binding site of polymerase A OF401_12040 PF02649 Type I GTP cyclohydrolase folE2 OF401_12045 PF01520 N-acetylmuramoyl-L-alanine amidase OF401_12065 PF00083 Sugar (and other) transporter OF401_12075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OF401_12075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OF401_12085 PF01055 Glycosyl hydrolases family 31 OF401_12085 PF17137 Domain of unknown function (DUF5110) OF401_12085 PF16338 Domain of unknown function (DUF4968) OF401_12105 PF00942 Cellulose binding domain OF401_12105 PF03442 Carbohydrate binding domain X2 OF401_12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_12120 PF03466 LysR substrate binding domain OF401_12125 PF01081 KDPG and KHG aldolase OF401_12130 PF13378 Enolase C-terminal domain-like OF401_12130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OF401_12135 PF08450 SMP-30/Gluconolactonase/LRE-like region OF401_12140 PF05035 2-keto-3-deoxy-galactonokinase OF401_12145 PF00037 4Fe-4S binding domain OF401_12145 PF11953 Domain of unknown function (DUF3470) OF401_12155 PF00701 Dihydrodipicolinate synthetase family OF401_12170 PF00578 AhpC/TSA family OF401_12175 PF02562 PhoH-like protein OF401_12175 PF13638 PIN domain OF401_12185 PF08543 Phosphomethylpyrimidine kinase OF401_12185 PF02581 Thiamine monophosphate synthase OF401_12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_12210 PF03466 LysR substrate binding domain OF401_12215 PF02678 Pirin OF401_12215 PF17954 Quercetinase C-terminal cupin domain OF401_12220 PF02678 Pirin OF401_12220 PF17954 Quercetinase C-terminal cupin domain OF401_12225 PF13426 PAS domain OF401_12225 PF08447 PAS fold OF401_12225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_12235 PF02599 Global regulator protein family OF401_12240 PF02272 DHHA1 domain OF401_12240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OF401_12240 PF01411 tRNA synthetases class II (A) OF401_12245 PF02631 RecX family OF401_12250 PF00154 recA bacterial DNA recombination protein OF401_12255 PF01726 LexA DNA binding domain OF401_12255 PF00717 Peptidase S24-like OF401_12260 PF03109 ABC1 family OF401_12265 PF07715 TonB-dependent Receptor Plug Domain OF401_12265 PF00593 TonB dependent receptor OF401_12275 PF02464 Competence-damaged protein OF401_12280 PF16360 GTP-binding GTPase Middle Region OF401_12280 PF01926 50S ribosome-binding GTPase OF401_12280 PF13167 GTP-binding GTPase N-terminal OF401_12285 PF17209 Hfq protein OF401_12295 PF00809 Pterin binding enzyme OF401_12300 PF01434 Peptidase family M41 OF401_12300 PF06480 FtsH Extracellular OF401_12300 PF17862 AAA+ lid domain OF401_12300 PF00004 ATPase family associated with various cellular activities (AAA) OF401_12305 PF01728 FtsJ-like methyltransferase OF401_12310 PF01985 CRS1 / YhbY (CRM) domain OF401_12315 PF04430 Protein of unknown function (DUF498/DUF598) OF401_12320 PF01551 Peptidase family M23 OF401_12320 PF01476 LysM domain OF401_12325 PF09335 SNARE associated Golgi protein OF401_12335 PF01975 Survival protein SurE OF401_12340 PF01713 Smr domain OF401_12350 PF01142 tRNA pseudouridine synthase D (TruD) OF401_12355 PF02542 YgbB family OF401_12360 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OF401_12365 PF04977 Septum formation initiator OF401_12370 PF03952 Enolase, N-terminal domain OF401_12370 PF00113 Enolase, C-terminal TIM barrel domain OF401_12380 PF00793 DAHP synthetase I family OF401_12385 PF00117 Glutamine amidotransferase class-I OF401_12385 PF06418 CTP synthase N-terminus OF401_12395 PF01751 Toprim domain OF401_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_12395 PF00204 DNA gyrase B OF401_12395 PF00986 DNA gyrase B subunit, carboxyl terminus OF401_12400 PF02611 CDP-diacylglycerol pyrophosphatase OF401_12415 PF01384 Phosphate transporter family OF401_12425 PF01595 Cyclin M transmembrane N-terminal domain OF401_12425 PF00571 CBS domain OF401_12425 PF03471 Transporter associated domain OF401_12440 PF00296 Luciferase-like monooxygenase OF401_12445 PF07690 Major Facilitator Superfamily OF401_12450 PF00005 ABC transporter OF401_12450 PF00664 ABC transporter transmembrane region OF401_12470 PF00534 Glycosyl transferases group 1 OF401_12470 PF13579 Glycosyl transferase 4-like domain OF401_12475 PF00534 Glycosyl transferases group 1 OF401_12475 PF13439 Glycosyltransferase Family 4 OF401_12485 PF13382 Adenine deaminase C-terminal domain OF401_12485 PF01979 Amidohydrolase family OF401_12505 PF00535 Glycosyl transferase family 2 OF401_12510 PF01943 Polysaccharide biosynthesis protein OF401_12515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OF401_12520 PF05523 WxcM-like, C-terminal OF401_12525 PF01292 Prokaryotic cytochrome b561 OF401_12535 PF00034 Cytochrome c OF401_12545 PF08281 Sigma-70, region 4 OF401_12545 PF04542 Sigma-70 region 2 OF401_12555 PF00082 Subtilase family OF401_12560 PF01578 Cytochrome C assembly protein OF401_12565 PF04995 Heme exporter protein D (CcmD) OF401_12570 PF03100 CcmE OF401_12575 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OF401_12575 PF01578 Cytochrome C assembly protein OF401_12580 PF08534 Redoxin OF401_12585 PF03918 Cytochrome C biogenesis protein OF401_12595 PF13426 PAS domain OF401_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_12595 PF00072 Response regulator receiver domain OF401_12600 PF06745 KaiC OF401_12605 PF00158 Sigma-54 interaction domain OF401_12605 PF00072 Response regulator receiver domain OF401_12605 PF02954 Bacterial regulatory protein, Fis family OF401_12610 PF08448 PAS fold OF401_12610 PF13188 PAS domain OF401_12610 PF00512 His Kinase A (phospho-acceptor) domain OF401_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_12610 PF00072 Response regulator receiver domain OF401_12655 PF02585 GlcNAc-PI de-N-acetylase OF401_12705 PF02796 Helix-turn-helix domain of resolvase OF401_12705 PF00239 Resolvase, N terminal domain OF401_12735 PF01526 Tn3 transposase DDE domain OF401_12735 PF13700 Domain of unknown function (DUF4158) OF401_12740 PF00589 Phage integrase family OF401_12740 PF02899 Phage integrase, N-terminal SAM-like domain OF401_12765 PF01526 Tn3 transposase DDE domain OF401_12765 PF13700 Domain of unknown function (DUF4158) OF401_12790 PF03377 TAL effector repeat OF401_12875 PF04002 RadC-like JAB domain OF401_12905 PF13175 AAA ATPase domain OF401_12925 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) OF401_12940 PF03466 LysR substrate binding domain OF401_12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_12945 PF02403 Seryl-tRNA synthetase N-terminal domain OF401_12945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OF401_12950 PF03544 Gram-negative bacterial TonB protein C-terminal OF401_12955 PF03544 Gram-negative bacterial TonB protein C-terminal OF401_12960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OF401_12965 PF01842 ACT domain OF401_12965 PF01817 Chorismate mutase type II OF401_12965 PF00800 Prephenate dehydratase OF401_12970 PF00266 Aminotransferase class-V OF401_12975 PF00174 Oxidoreductase molybdopterin binding domain OF401_12980 PF01794 Ferric reductase like transmembrane component OF401_13005 PF00392 Bacterial regulatory proteins, gntR family OF401_13005 PF07702 UTRA domain OF401_13015 PF01979 Amidohydrolase family OF401_13020 PF00221 Aromatic amino acid lyase OF401_13030 PF17391 Urocanase N-terminal domain OF401_13030 PF17392 Urocanase C-terminal domain OF401_13030 PF01175 Urocanase Rossmann-like domain OF401_13040 PF13360 PQQ-like domain OF401_13045 PF03989 DNA gyrase C-terminal domain, beta-propeller OF401_13045 PF00521 DNA gyrase/topoisomerase IV, subunit A OF401_13050 PF01008 Initiation factor 2 subunit family OF401_13060 PF00152 tRNA synthetases class II (D, K and N) OF401_13065 PF00533 BRCA1 C Terminus (BRCT) domain OF401_13065 PF12826 Helix-hairpin-helix motif OF401_13065 PF01653 NAD-dependent DNA ligase adenylation domain OF401_13065 PF03120 NAD-dependent DNA ligase OB-fold domain OF401_13065 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OF401_13070 PF00155 Aminotransferase class I and II OF401_13075 PF04354 ZipA, C-terminal FtsZ-binding domain OF401_13080 PF02463 RecF/RecN/SMC N terminal domain OF401_13095 PF01281 Ribosomal protein L9, N-terminal domain OF401_13095 PF03948 Ribosomal protein L9, C-terminal domain OF401_13100 PF01084 Ribosomal protein S18 OF401_13105 PF01250 Ribosomal protein S6 OF401_13110 PF01521 Iron-sulphur cluster biosynthesis OF401_13115 PF01336 OB-fold nucleic acid binding domain OF401_13115 PF00152 tRNA synthetases class II (D, K and N) OF401_13140 PF00484 Carbonic anhydrase OF401_13145 PF06052 3-hydroxyanthranilic acid dioxygenase OF401_13155 PF00266 Aminotransferase class-V OF401_13160 PF01494 FAD binding domain OF401_13165 PF08411 Exonuclease C-terminal OF401_13165 PF00929 Exonuclease OF401_13190 PF01513 ATP-NAD kinase OF401_13195 PF10672 S-adenosylmethionine-dependent methyltransferase OF401_13195 PF02926 THUMP domain OF401_13195 PF01170 Putative RNA methylase family UPF0020 OF401_13200 PF12848 ABC transporter OF401_13200 PF00005 ABC transporter OF401_13200 PF16326 ABC transporter C-terminal domain OF401_13235 PF00581 Rhodanese-like domain OF401_13240 PF00293 NUDIX domain OF401_13245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OF401_13245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OF401_13250 PF00378 Enoyl-CoA hydratase/isomerase OF401_13260 PF10576 Iron-sulfur binding domain of endonuclease III OF401_13260 PF00730 HhH-GPD superfamily base excision DNA repair protein OF401_13260 PF00633 Helix-hairpin-helix motif OF401_13265 PF00916 Sulfate permease family OF401_13265 PF01740 STAS domain OF401_13270 PF00484 Carbonic anhydrase OF401_13285 PF12849 PBP superfamily domain OF401_13290 PF12849 PBP superfamily domain OF401_13295 PF00528 Binding-protein-dependent transport system inner membrane component OF401_13300 PF00528 Binding-protein-dependent transport system inner membrane component OF401_13305 PF00005 ABC transporter OF401_13310 PF01895 PhoU domain OF401_13320 PF00929 Exonuclease OF401_13325 PF00990 Diguanylate cyclase, GGDEF domain OF401_13330 PF08032 RNA 2'-O ribose methyltransferase substrate binding OF401_13330 PF00588 SpoU rRNA Methylase family OF401_13340 PF17876 Cold shock domain OF401_13340 PF08461 Ribonuclease R winged-helix domain OF401_13340 PF08206 Ribonuclease B OB domain OF401_13340 PF00773 RNB domain OF401_13340 PF00575 S1 RNA binding domain OF401_13355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_13355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_13355 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_13360 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_13360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_13360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_13365 PF01209 ubiE/COQ5 methyltransferase family OF401_13370 PF00809 Pterin binding enzyme OF401_13370 PF02574 Homocysteine S-methyltransferase OF401_13375 PF02574 Homocysteine S-methyltransferase OF401_13375 PF00809 Pterin binding enzyme OF401_13375 PF02607 B12 binding domain OF401_13375 PF02310 B12 binding domain OF401_13375 PF02965 Vitamin B12 dependent methionine synthase, activation domain OF401_13385 PF00294 pfkB family carbohydrate kinase OF401_13390 PF07690 Major Facilitator Superfamily OF401_13395 PF00356 Bacterial regulatory proteins, lacI family OF401_13415 PF04102 SlyX OF401_13420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OF401_13420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OF401_13420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OF401_13425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OF401_13425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OF401_13435 PF00255 Glutathione peroxidase OF401_13445 PF00392 Bacterial regulatory proteins, gntR family OF401_13450 PF00005 ABC transporter OF401_13475 PF10415 Fumarase C C-terminus OF401_13475 PF00206 Lyase OF401_13485 PF08328 Adenylosuccinate lyase C-terminal OF401_13485 PF00206 Lyase OF401_13495 PF08007 Cupin superfamily protein OF401_13505 PF02779 Transketolase, pyrimidine binding domain OF401_13505 PF16078 2-oxoglutarate dehydrogenase N-terminus OF401_13505 PF00676 Dehydrogenase E1 component OF401_13505 PF16870 2-oxoglutarate dehydrogenase C-terminal OF401_13510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OF401_13510 PF00364 Biotin-requiring enzyme OF401_13510 PF02817 e3 binding domain OF401_13515 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_13515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OF401_13520 PF03641 Possible lysine decarboxylase OF401_13525 PF01205 Uncharacterized protein family UPF0029 OF401_13530 PF00005 ABC transporter OF401_13530 PF00664 ABC transporter transmembrane region OF401_13535 PF03466 LysR substrate binding domain OF401_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_13540 PF00664 ABC transporter transmembrane region OF401_13540 PF00005 ABC transporter OF401_13540 PF03412 Peptidase C39 family OF401_13565 PF08543 Phosphomethylpyrimidine kinase OF401_13575 PF01556 DnaJ C terminal domain OF401_13575 PF00226 DnaJ domain OF401_13575 PF00684 DnaJ central domain OF401_13580 PF00012 Hsp70 protein OF401_13585 PF01025 GrpE OF401_13590 PF01628 HrcA protein C terminal domain OF401_13590 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding OF401_13595 PF02463 RecF/RecN/SMC N terminal domain OF401_13600 PF01475 Ferric uptake regulator family OF401_13605 PF04355 SmpA / OmlA family OF401_13610 PF03658 RnfH family Ubiquitin OF401_13620 PF01668 SmpB protein OF401_13625 PF00082 Subtilase family OF401_13670 PF04245 37-kD nucleoid-associated bacterial protein OF401_13695 PF02534 Type IV secretory system Conjugative DNA transfer OF401_13745 PF12102 Domain of unknown function (DUF3578) OF401_13745 PF07728 AAA domain (dynein-related subfamily) OF401_13755 PF03852 DNA mismatch endonuclease Vsr OF401_13760 PF00145 C-5 cytosine-specific DNA methylase OF401_13765 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA OF401_13800 PF04002 RadC-like JAB domain OF401_13815 PF00072 Response regulator receiver domain OF401_13815 PF04397 LytTr DNA-binding domain OF401_13820 PF06580 Histidine kinase OF401_13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_13820 PF07694 5TMR of 5TMR-LYT OF401_13825 PF01609 Transposase DDE domain OF401_13825 PF05598 Transposase domain (DUF772) OF401_13835 PF07690 Major Facilitator Superfamily OF401_13840 PF01638 HxlR-like helix-turn-helix OF401_13855 PF00672 HAMP domain OF401_13855 PF02203 Tar ligand binding domain homologue OF401_13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OF401_13860 PF00034 Cytochrome c OF401_13860 PF03150 Di-haem cytochrome c peroxidase OF401_13870 PF16220 Domain of unknown function (DUF4880) OF401_13870 PF04773 FecR protein OF401_13875 PF04542 Sigma-70 region 2 OF401_13875 PF08281 Sigma-70, region 4 OF401_13880 PF05598 Transposase domain (DUF772) OF401_13880 PF01609 Transposase DDE domain OF401_13910 PF02086 D12 class N6 adenine-specific DNA methyltransferase OF401_13930 PF00990 Diguanylate cyclase, GGDEF domain OF401_13940 PF00990 Diguanylate cyclase, GGDEF domain OF401_13945 PF02321 Outer membrane efflux protein OF401_13955 PF00873 AcrB/AcrD/AcrF family OF401_13960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_13960 PF00529 HlyD membrane-fusion protein of T1SS OF401_13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_13970 PF03466 LysR substrate binding domain OF401_13975 PF00691 OmpA family OF401_13975 PF05736 OprF membrane domain OF401_13980 PF00875 DNA photolyase OF401_13980 PF03441 FAD binding domain of DNA photolyase OF401_13985 PF00772 DnaB-like helicase N terminal domain OF401_13985 PF03796 DnaB-like helicase C terminal domain OF401_13990 PF03358 NADPH-dependent FMN reductase OF401_13995 PF00733 Asparagine synthase OF401_13995 PF13537 Glutamine amidotransferase domain OF401_14000 PF00043 Glutathione S-transferase, C-terminal domain OF401_14000 PF02798 Glutathione S-transferase, N-terminal domain OF401_14010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_14010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_14010 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_14025 PF01026 TatD related DNase OF401_14030 PF00899 ThiF family OF401_14045 PF00313 'Cold-shock' DNA-binding domain OF401_14055 PF02253 Phospholipase A1 OF401_14060 PF00484 Carbonic anhydrase OF401_14075 PF05683 Fumarase C-terminus OF401_14075 PF05681 Fumarate hydratase (Fumerase) OF401_14080 PF00005 ABC transporter OF401_14085 PF00970 Oxidoreductase FAD-binding domain OF401_14085 PF00175 Oxidoreductase NAD-binding domain OF401_14090 PF00255 Glutathione peroxidase OF401_14095 PF01432 Peptidase family M3 OF401_14130 PF00854 POT family OF401_14140 PF14310 Fibronectin type III-like domain OF401_14140 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_14140 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_14160 PF07690 Major Facilitator Superfamily OF401_14165 PF00529 HlyD membrane-fusion protein of T1SS OF401_14165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_14170 PF02321 Outer membrane efflux protein OF401_14185 PF03989 DNA gyrase C-terminal domain, beta-propeller OF401_14185 PF00521 DNA gyrase/topoisomerase IV, subunit A OF401_14190 PF05724 Thiopurine S-methyltransferase (TPMT) OF401_14195 PF00210 Ferritin-like domain OF401_14200 PF01804 Penicillin amidase OF401_14205 PF07715 TonB-dependent Receptor Plug Domain OF401_14205 PF00593 TonB dependent receptor OF401_14215 PF00733 Asparagine synthase OF401_14215 PF13537 Glutamine amidotransferase domain OF401_14225 PF07687 Peptidase dimerisation domain OF401_14225 PF01546 Peptidase family M20/M25/M40 OF401_14230 PF03960 ArsC family OF401_14240 PF00132 Bacterial transferase hexapeptide (six repeats) OF401_14240 PF14602 Hexapeptide repeat of succinyl-transferase OF401_14240 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OF401_14245 PF08335 GlnD PII-uridylyltransferase OF401_14245 PF01909 Nucleotidyltransferase domain OF401_14245 PF01966 HD domain OF401_14250 PF00557 Metallopeptidase family M24 OF401_14270 PF05229 Spore Coat Protein U domain OF401_14285 PF00318 Ribosomal protein S2 OF401_14290 PF00889 Elongation factor TS OF401_14295 PF00072 Response regulator receiver domain OF401_14295 PF00990 Diguanylate cyclase, GGDEF domain OF401_14300 PF00696 Amino acid kinase family OF401_14305 PF01765 Ribosome recycling factor OF401_14310 PF01255 Putative undecaprenyl diphosphate synthase OF401_14320 PF13288 DXP reductoisomerase C-terminal domain OF401_14320 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OF401_14320 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OF401_14325 PF17820 PDZ domain OF401_14325 PF02163 Peptidase family M50 OF401_14330 PF01103 Surface antigen OF401_14330 PF07244 Surface antigen variable number repeat OF401_14340 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OF401_14340 PF00132 Bacterial transferase hexapeptide (six repeats) OF401_14345 PF07977 FabA-like domain OF401_14350 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OF401_14350 PF00132 Bacterial transferase hexapeptide (six repeats) OF401_14355 PF02684 Lipid-A-disaccharide synthetase OF401_14360 PF01351 Ribonuclease HII OF401_14365 PF02811 PHP domain OF401_14365 PF01336 OB-fold nucleic acid binding domain OF401_14365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OF401_14365 PF07733 Bacterial DNA polymerase III alpha NTPase domain OF401_14365 PF14579 Helix-hairpin-helix motif OF401_14370 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OF401_14380 PF03653 Uncharacterised protein family (UPF0093) OF401_14405 PF03551 Transcriptional regulator PadR-like family OF401_14430 PF02592 Putative vitamin uptake transporter OF401_14440 PF02574 Homocysteine S-methyltransferase OF401_14445 PF00324 Amino acid permease OF401_14450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OF401_14460 PF00593 TonB dependent receptor OF401_14460 PF07715 TonB-dependent Receptor Plug Domain OF401_14465 PF01588 Putative tRNA binding domain OF401_14465 PF09334 tRNA synthetases class I (M) OF401_14475 PF04060 Putative Fe-S cluster OF401_14490 PF04542 Sigma-70 region 2 OF401_14490 PF04545 Sigma-70, region 4 OF401_14535 PF01042 Endoribonuclease L-PSP OF401_14545 PF09924 Uncharacterised conserved protein (DUF2156) OF401_14545 PF03706 Lysylphosphatidylglycerol synthase TM region OF401_14580 PF07690 Major Facilitator Superfamily OF401_14585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OF401_14605 PF03831 PhnA domain OF401_14605 PF08274 PhnA Zinc-Ribbon OF401_14615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OF401_14640 PF04542 Sigma-70 region 2 OF401_14640 PF08281 Sigma-70, region 4 OF401_14665 PF01258 Prokaryotic dksA/traR C4-type zinc finger OF401_14675 PF07043 Protein of unknown function (DUF1328) OF401_14680 PF01863 Protein of unknown function DUF45 OF401_14690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OF401_14690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OF401_14695 PF03797 Autotransporter beta-domain OF401_14695 PF00082 Subtilase family OF401_14700 PF00108 Thiolase, N-terminal domain OF401_14700 PF02803 Thiolase, C-terminal domain OF401_14715 PF00072 Response regulator receiver domain OF401_14715 PF00990 Diguanylate cyclase, GGDEF domain OF401_14735 PF04679 ATP dependent DNA ligase C terminal region OF401_14735 PF01068 ATP dependent DNA ligase domain OF401_14735 PF04675 DNA ligase N terminus OF401_14745 PF01068 ATP dependent DNA ligase domain OF401_14745 PF04679 ATP dependent DNA ligase C terminal region OF401_14745 PF04675 DNA ligase N terminus OF401_14750 PF00271 Helicase conserved C-terminal domain OF401_14750 PF08494 DEAD/H associated OF401_14750 PF00270 DEAD/DEAH box helicase OF401_14760 PF01494 FAD binding domain OF401_14765 PF00313 'Cold-shock' DNA-binding domain OF401_14770 PF01048 Phosphorylase superfamily OF401_14775 PF00156 Phosphoribosyl transferase domain OF401_14780 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_14785 PF04244 Deoxyribodipyrimidine photo-lyase-related protein OF401_14790 PF01266 FAD dependent oxidoreductase OF401_14790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase OF401_14795 PF01323 DSBA-like thioredoxin domain OF401_14800 PF01928 CYTH domain OF401_14810 PF05958 tRNA (Uracil-5-)-methyltransferase OF401_14815 PF00072 Response regulator receiver domain OF401_14815 PF00486 Transcriptional regulatory protein, C terminal OF401_14820 PF11967 Recombination protein O N terminal OF401_14820 PF02565 Recombination protein O C terminal OF401_14825 PF07650 KH domain OF401_14825 PF01926 50S ribosome-binding GTPase OF401_14830 PF14622 Ribonuclease-III-like OF401_14830 PF00035 Double-stranded RNA binding motif OF401_14840 PF10502 Signal peptidase, peptidase S26 OF401_14845 PF00009 Elongation factor Tu GTP binding domain OF401_14845 PF03144 Elongation factor Tu domain 2 OF401_14845 PF06421 GTP-binding protein LepA C-terminus OF401_14845 PF00679 Elongation factor G C-terminus OF401_14850 PF13180 PDZ domain OF401_14860 PF04542 Sigma-70 region 2 OF401_14860 PF08281 Sigma-70, region 4 OF401_14865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OF401_14865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OF401_14865 PF00378 Enoyl-CoA hydratase/isomerase OF401_14870 PF01545 Cation efflux family OF401_14875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OF401_14875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OF401_14880 PF00378 Enoyl-CoA hydratase/isomerase OF401_14885 PF00378 Enoyl-CoA hydratase/isomerase OF401_14890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OF401_14890 PF02770 Acyl-CoA dehydrogenase, middle domain OF401_14890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OF401_14895 PF00171 Aldehyde dehydrogenase family OF401_14900 PF01381 Helix-turn-helix OF401_14900 PF09856 Predicted transcriptional regulator (DUF2083) OF401_14900 PF06114 IrrE N-terminal-like domain OF401_14910 PF07745 Glycosyl hydrolase family 53 OF401_14915 PF16355 Domain of unknown function (DUF4982) OF401_14915 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OF401_14915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OF401_14915 PF02837 Glycosyl hydrolases family 2, sugar binding domain OF401_14915 PF00703 Glycosyl hydrolases family 2 OF401_14920 PF05598 Transposase domain (DUF772) OF401_14920 PF01609 Transposase DDE domain OF401_14950 PF14310 Fibronectin type III-like domain OF401_14950 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_14950 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_14960 PF05598 Transposase domain (DUF772) OF401_14960 PF01609 Transposase DDE domain OF401_14995 PF01464 Transglycosylase SLT domain OF401_15005 PF00263 Bacterial type II and III secretion system protein OF401_15005 PF03958 Bacterial type II/III secretion system short domain OF401_15020 PF18269 T3SS EscN ATPase C-terminal domain OF401_15020 PF02874 ATP synthase alpha/beta family, beta-barrel domain OF401_15020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OF401_15035 PF01514 Secretory protein of YscJ/FliF family OF401_15050 PF01312 FlhB HrpN YscU SpaS Family OF401_15055 PF00771 FHIPEP family OF401_15070 PF00813 FliP family OF401_15075 PF01313 Bacterial export proteins, family 3 OF401_15105 PF03211 Pectate lyase OF401_15115 PF05819 NolX protein OF401_15125 PF00440 Bacterial regulatory proteins, tetR family OF401_15130 PF00155 Aminotransferase class I and II OF401_15140 PF00266 Aminotransferase class-V OF401_15150 PF03301 Tryptophan 2,3-dioxygenase OF401_15155 PF03301 Tryptophan 2,3-dioxygenase OF401_15165 PF01624 MutS domain I OF401_15165 PF05188 MutS domain II OF401_15165 PF05192 MutS domain III OF401_15165 PF05190 MutS family domain IV OF401_15165 PF00488 MutS domain V OF401_15175 PF00141 Peroxidase OF401_15180 PF01479 S4 domain OF401_15185 PF01554 MatE OF401_15190 PF01245 Ribosomal protein L19 OF401_15195 PF01746 tRNA (Guanine-1)-methyltransferase OF401_15200 PF01782 RimM N-terminal domain OF401_15200 PF05239 PRC-barrel domain OF401_15205 PF00886 Ribosomal protein S16 OF401_15215 PF03060 Nitronate monooxygenase OF401_15220 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) OF401_15230 PF02881 SRP54-type protein, helical bundle domain OF401_15230 PF00448 SRP54-type protein, GTPase domain OF401_15230 PF02978 Signal peptide binding domain OF401_15235 PF01578 Cytochrome C assembly protein OF401_15240 PF01263 Aldose 1-epimerase OF401_15245 PF06964 Alpha-L-arabinofuranosidase C-terminal domain OF401_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_15250 PF03466 LysR substrate binding domain OF401_15270 PF00072 Response regulator receiver domain OF401_15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15275 PF13426 PAS domain OF401_15275 PF00072 Response regulator receiver domain OF401_15280 PF01627 Hpt domain OF401_15280 PF00672 HAMP domain OF401_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15280 PF00512 His Kinase A (phospho-acceptor) domain OF401_15280 PF00072 Response regulator receiver domain OF401_15280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OF401_15285 PF01739 CheR methyltransferase, SAM binding domain OF401_15285 PF03705 CheR methyltransferase, all-alpha domain OF401_15290 PF01339 CheB methylesterase OF401_15295 PF13492 GAF domain OF401_15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15295 PF00512 His Kinase A (phospho-acceptor) domain OF401_15295 PF02702 Osmosensitive K+ channel His kinase sensor domain OF401_15295 PF13493 Domain of unknown function (DUF4118) OF401_15300 PF07237 Protein of unknown function (DUF1428) OF401_15305 PF00085 Thioredoxin OF401_15310 PF00593 TonB dependent receptor OF401_15310 PF07715 TonB-dependent Receptor Plug Domain OF401_15315 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OF401_15315 PF04616 Glycosyl hydrolases family 43 OF401_15325 PF00512 His Kinase A (phospho-acceptor) domain OF401_15325 PF13188 PAS domain OF401_15325 PF00072 Response regulator receiver domain OF401_15325 PF08448 PAS fold OF401_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15330 PF00072 Response regulator receiver domain OF401_15330 PF17149 Periplasmic sensor domain found in signal transduction proteins OF401_15330 PF00672 HAMP domain OF401_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15330 PF01627 Hpt domain OF401_15330 PF00512 His Kinase A (phospho-acceptor) domain OF401_15340 PF13581 Histidine kinase-like ATPase domain OF401_15345 PF01740 STAS domain OF401_15350 PF01740 STAS domain OF401_15350 PF08678 Rsbr N terminal OF401_15355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OF401_15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15365 PF00183 Hsp90 protein OF401_15370 PF12833 Helix-turn-helix domain OF401_15385 PF05656 Protein of unknown function (DUF805) OF401_15390 PF18073 Rubredoxin metal binding domain OF401_15400 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OF401_15405 PF00510 Cytochrome c oxidase subunit III OF401_15410 PF00115 Cytochrome C and Quinol oxidase polypeptide I OF401_15415 PF06481 COX Aromatic Rich Motif OF401_15415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OF401_15425 PF02401 LytB protein OF401_15430 PF01252 Signal peptidase (SPase) II OF401_15435 PF08264 Anticodon-binding domain of tRNA OF401_15435 PF00133 tRNA synthetases class I (I, L, M and V) OF401_15435 PF06827 Zinc finger found in FPG and IleRS OF401_15440 PF06574 FAD synthetase OF401_15440 PF01687 Riboflavin kinase OF401_15445 PF03023 Lipid II flippase MurJ OF401_15450 PF01649 Ribosomal protein S20 OF401_15455 PF01926 50S ribosome-binding GTPase OF401_15455 PF01018 GTP1/OBG OF401_15460 PF01016 Ribosomal L27 protein OF401_15465 PF00829 Ribosomal prokaryotic L21 protein OF401_15470 PF17760 UvrA interaction domain OF401_15470 PF17755 UvrA DNA-binding domain OF401_15470 PF00005 ABC transporter OF401_15480 PF00378 Enoyl-CoA hydratase/isomerase OF401_15500 PF08281 Sigma-70, region 4 OF401_15500 PF04542 Sigma-70 region 2 OF401_15510 PF04377 Arginine-tRNA-protein transferase, C terminus OF401_15510 PF04376 Arginine-tRNA-protein transferase, N terminus OF401_15530 PF01370 NAD dependent epimerase/dehydratase family OF401_15530 PF02222 ATP-grasp domain OF401_15560 PF00730 HhH-GPD superfamily base excision DNA repair protein OF401_15590 PF00196 Bacterial regulatory proteins, luxR family OF401_15590 PF00072 Response regulator receiver domain OF401_15595 PF07730 Histidine kinase OF401_15605 PF03775 Septum formation inhibitor MinC, C-terminal domain OF401_15605 PF05209 Septum formation inhibitor MinC, N-terminal domain OF401_15610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OF401_15615 PF03776 Septum formation topological specificity factor MinE OF401_15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_15625 PF00512 His Kinase A (phospho-acceptor) domain OF401_15630 PF00486 Transcriptional regulatory protein, C terminal OF401_15630 PF00072 Response regulator receiver domain OF401_15645 PF00884 Sulfatase OF401_15645 PF08019 Phosphoethanolamine transferase EptA/EptB OF401_15665 PF07690 Major Facilitator Superfamily OF401_15670 PF02347 Glycine cleavage system P-protein OF401_15685 PF00248 Aldo/keto reductase family OF401_15690 PF18011 C-terminal domain found in long catalases OF401_15690 PF00199 Catalase OF401_15690 PF06628 Catalase-related immune-responsive OF401_15705 PF12833 Helix-turn-helix domain OF401_15705 PF02311 AraC-like ligand binding domain OF401_15725 PF00326 Prolyl oligopeptidase family OF401_15725 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OF401_15725 PF07676 WD40-like Beta Propeller Repeat OF401_15735 PF03169 OPT oligopeptide transporter protein OF401_15745 PF07733 Bacterial DNA polymerase III alpha NTPase domain OF401_15745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OF401_15745 PF14579 Helix-hairpin-helix motif OF401_15745 PF02811 PHP domain OF401_15760 PF01726 LexA DNA binding domain OF401_15760 PF00717 Peptidase S24-like OF401_15790 PF00111 2Fe-2S iron-sulfur cluster binding domain OF401_15790 PF01799 [2Fe-2S] binding domain OF401_15790 PF10518 TAT (twin-arginine translocation) pathway signal sequence OF401_15795 PF03450 CO dehydrogenase flavoprotein C-terminal domain OF401_15795 PF00941 FAD binding domain in molybdopterin dehydrogenase OF401_15800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OF401_15800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OF401_15805 PF14310 Fibronectin type III-like domain OF401_15805 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_15805 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_15815 PF17755 UvrA DNA-binding domain OF401_15835 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_15845 PF00106 short chain dehydrogenase OF401_15850 PF07971 Glycosyl hydrolase family 92 OF401_15850 PF17678 Glycosyl hydrolase family 92 N-terminal domain OF401_15865 PF00723 Glycosyl hydrolases family 15 OF401_15875 PF01256 Carbohydrate kinase OF401_15880 PF00300 Histidine phosphatase superfamily (branch 1) OF401_15880 PF13456 Reverse transcriptase-like OF401_15910 PF00580 UvrD/REP helicase N-terminal domain OF401_15910 PF13361 UvrD-like helicase C-terminal domain OF401_15915 PF01555 DNA methylase OF401_15920 PF05598 Transposase domain (DUF772) OF401_15920 PF01609 Transposase DDE domain OF401_15970 PF00440 Bacterial regulatory proteins, tetR family OF401_16005 PF01433 Peptidase family M1 domain OF401_16005 PF11838 ERAP1-like C-terminal domain OF401_16010 PF00709 Adenylosuccinate synthetase OF401_16020 PF01145 SPFH domain / Band 7 family OF401_16025 PF01145 SPFH domain / Band 7 family OF401_16025 PF12221 Bacterial membrane protein N terminal OF401_16030 PF00072 Response regulator receiver domain OF401_16035 PF00226 DnaJ domain OF401_16035 PF01556 DnaJ C terminal domain OF401_16040 PF00011 Hsp20/alpha crystallin family OF401_16045 PF08534 Redoxin OF401_16055 PF00912 Transglycosylase OF401_16055 PF00905 Penicillin binding protein transpeptidase domain OF401_16055 PF06832 Penicillin-Binding Protein C-terminus Family OF401_16080 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain OF401_16080 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain OF401_16080 PF11974 Bacterial alpha-2-macroglobulin MG3 domain OF401_16080 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain OF401_16080 PF01835 MG2 domain OF401_16080 PF00207 Alpha-2-macroglobulin family OF401_16080 PF07703 Alpha-2-macroglobulin bait region domain OF401_16080 PF17962 Bacterial macroglobulin domain 6 OF401_16095 PF00593 TonB dependent receptor OF401_16095 PF07715 TonB-dependent Receptor Plug Domain OF401_16100 PF04303 PrpF protein OF401_16110 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH OF401_16115 PF00330 Aconitase family (aconitate hydratase) OF401_16115 PF00694 Aconitase C-terminal domain OF401_16120 PF00285 Citrate synthase, C-terminal domain OF401_16130 PF02954 Bacterial regulatory protein, Fis family OF401_16130 PF06506 Propionate catabolism activator OF401_16130 PF00158 Sigma-54 interaction domain OF401_16170 PF09115 DNA polymerase III, delta subunit, C terminal OF401_16175 PF02618 YceG-like family OF401_16180 PF04715 Anthranilate synthase component I, N terminal region OF401_16180 PF00425 chorismate binding enzyme OF401_16185 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_16185 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_16190 PF00550 Phosphopantetheine attachment site OF401_16200 PF00698 Acyl transferase domain OF401_16215 PF02620 Large ribosomal RNA subunit accumulation protein YceD OF401_16240 PF00535 Glycosyl transferase family 2 OF401_16250 PF07726 ATPase family associated with various cellular activities (AAA) OF401_16250 PF17863 AAA lid domain OF401_16260 PF11992 Domain of unknown function (DUF3488) OF401_16260 PF01841 Transglutaminase-like superfamily OF401_16260 PF13559 Domain of unknown function (DUF4129) OF401_16270 PF01230 HIT domain OF401_16275 PF13662 Toprim domain OF401_16275 PF02132 RecR protein OF401_16280 PF02575 YbaB/EbfC DNA-binding family OF401_16285 PF12169 DNA polymerase III subunits gamma and tau domain III OF401_16285 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OF401_16285 PF12170 DNA polymerase III tau subunit V interacting with alpha OF401_16300 PF02391 MoaE protein OF401_16305 PF02597 ThiS family OF401_16310 PF01967 MoaC family OF401_16320 PF06463 Molybdenum Cofactor Synthesis C OF401_16320 PF04055 Radical SAM superfamily OF401_16325 PF00753 Metallo-beta-lactamase superfamily OF401_16325 PF12706 Beta-lactamase superfamily domain OF401_16335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) OF401_16345 PF03389 MobA/MobL family OF401_16405 PF00929 Exonuclease OF401_16410 PF00075 RNase H OF401_16420 PF16123 Hydroxyacylglutathione hydrolase C-terminus OF401_16420 PF00753 Metallo-beta-lactamase superfamily OF401_16425 PF05257 CHAP domain OF401_16425 PF01476 LysM domain OF401_16450 PF00216 Bacterial DNA-binding protein OF401_16455 PF05362 Lon protease (S16) C-terminal proteolytic domain OF401_16455 PF02190 ATP-dependent protease La (LON) substrate-binding domain OF401_16455 PF00004 ATPase family associated with various cellular activities (AAA) OF401_16460 PF07724 AAA domain (Cdc48 subfamily) OF401_16460 PF10431 C-terminal, D2-small domain, of ClpB protein OF401_16460 PF06689 ClpX C4-type zinc finger OF401_16465 PF00574 Clp protease OF401_16470 PF05698 Bacterial trigger factor protein (TF) C-terminus OF401_16470 PF05697 Bacterial trigger factor protein (TF) OF401_16505 PF00180 Isocitrate/isopropylmalate dehydrogenase OF401_16505 PF18324 Hypothetical protein TT1725 OF401_16515 PF00462 Glutaredoxin OF401_16520 PF01435 Peptidase family M48 OF401_16520 PF13181 Tetratricopeptide repeat OF401_16525 PF00072 Response regulator receiver domain OF401_16525 PF00486 Transcriptional regulatory protein, C terminal OF401_16530 PF00512 His Kinase A (phospho-acceptor) domain OF401_16530 PF00989 PAS fold OF401_16530 PF11808 Phosphate regulon sensor protein PhoR OF401_16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_16535 PF13089 Polyphosphate kinase N-terminal domain OF401_16535 PF17941 Polyphosphate kinase C-terminal domain 1 OF401_16535 PF02503 Polyphosphate kinase middle domain OF401_16535 PF13090 Polyphosphate kinase C-terminal domain 2 OF401_16540 PF02541 Ppx/GppA phosphatase family OF401_16545 PF13439 Glycosyltransferase Family 4 OF401_16545 PF00534 Glycosyl transferases group 1 OF401_16550 PF01569 PAP2 superfamily OF401_16555 PF00149 Calcineurin-like phosphoesterase OF401_16570 PF04305 Protein of unknown function (DUF455) OF401_16575 PF00156 Phosphoribosyl transferase domain OF401_16590 PF02875 Mur ligase family, glutamate ligase domain OF401_16590 PF08245 Mur ligase middle domain OF401_16605 PF00300 Histidine phosphatase superfamily (branch 1) OF401_16610 PF05506 Domain of unknown function (DUF756) OF401_16610 PF04185 Phosphoesterase family OF401_16620 PF08240 Alcohol dehydrogenase GroES-like domain OF401_16620 PF00107 Zinc-binding dehydrogenase OF401_16630 PF00005 ABC transporter OF401_16630 PF12857 TOBE-like domain OF401_16635 PF00528 Binding-protein-dependent transport system inner membrane component OF401_16640 PF00528 Binding-protein-dependent transport system inner membrane component OF401_16650 PF00155 Aminotransferase class I and II OF401_16660 PF00849 RNA pseudouridylate synthase OF401_16670 PF05736 OprF membrane domain OF401_16670 PF00691 OmpA family OF401_16675 PF00107 Zinc-binding dehydrogenase OF401_16675 PF08240 Alcohol dehydrogenase GroES-like domain OF401_16680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OF401_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_16685 PF05598 Transposase domain (DUF772) OF401_16685 PF01609 Transposase DDE domain OF401_16705 PF02798 Glutathione S-transferase, N-terminal domain OF401_16705 PF00043 Glutathione S-transferase, C-terminal domain OF401_16710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OF401_16710 PF00056 lactate/malate dehydrogenase, NAD binding domain OF401_16715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OF401_16720 PF00009 Elongation factor Tu GTP binding domain OF401_16720 PF03144 Elongation factor Tu domain 2 OF401_16720 PF00679 Elongation factor G C-terminus OF401_16730 PF01425 Amidase OF401_16745 PF01474 Class-II DAHP synthetase family OF401_16750 PF02600 Disulfide bond formation protein DsbB OF401_16755 PF01196 Ribosomal protein L17 OF401_16760 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OF401_16760 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OF401_16760 PF01000 RNA polymerase Rpb3/RpoA insert domain OF401_16765 PF01479 S4 domain OF401_16765 PF00163 Ribosomal protein S4/S9 N-terminal domain OF401_16770 PF00411 Ribosomal protein S11 OF401_16775 PF00416 Ribosomal protein S13/S18 OF401_16780 PF00344 SecY translocase OF401_16785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OF401_16790 PF00327 Ribosomal protein L30p/L7e OF401_16795 PF03719 Ribosomal protein S5, C-terminal domain OF401_16795 PF00333 Ribosomal protein S5, N-terminal domain OF401_16800 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OF401_16805 PF00347 Ribosomal protein L6 OF401_16810 PF00410 Ribosomal protein S8 OF401_16815 PF00253 Ribosomal protein S14p/S29e OF401_16820 PF00673 ribosomal L5P family C-terminus OF401_16820 PF00281 Ribosomal protein L5 OF401_16825 PF00467 KOW motif OF401_16825 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OF401_16830 PF00238 Ribosomal protein L14p/L23e OF401_16835 PF00366 Ribosomal protein S17 OF401_16840 PF00831 Ribosomal L29 protein OF401_16845 PF00252 Ribosomal protein L16p/L10e OF401_16850 PF07650 KH domain OF401_16850 PF00189 Ribosomal protein S3, C-terminal domain OF401_16855 PF00237 Ribosomal protein L22p/L17e OF401_16860 PF00203 Ribosomal protein S19 OF401_16865 PF03947 Ribosomal Proteins L2, C-terminal domain OF401_16865 PF00181 Ribosomal Proteins L2, RNA binding domain OF401_16870 PF00276 Ribosomal protein L23 OF401_16875 PF00573 Ribosomal protein L4/L1 family OF401_16880 PF00297 Ribosomal protein L3 OF401_16885 PF00338 Ribosomal protein S10p/S20e OF401_16890 PF00009 Elongation factor Tu GTP binding domain OF401_16890 PF03144 Elongation factor Tu domain 2 OF401_16890 PF03143 Elongation factor Tu C-terminal domain OF401_16895 PF00679 Elongation factor G C-terminus OF401_16895 PF14492 Elongation Factor G, domain II OF401_16895 PF03764 Elongation factor G, domain IV OF401_16895 PF00009 Elongation factor Tu GTP binding domain OF401_16895 PF03144 Elongation factor Tu domain 2 OF401_16900 PF00177 Ribosomal protein S7p/S5e OF401_16905 PF00164 Ribosomal protein S12/S23 OF401_16910 PF00623 RNA polymerase Rpb1, domain 2 OF401_16910 PF04998 RNA polymerase Rpb1, domain 5 OF401_16910 PF04983 RNA polymerase Rpb1, domain 3 OF401_16910 PF04997 RNA polymerase Rpb1, domain 1 OF401_16910 PF05000 RNA polymerase Rpb1, domain 4 OF401_16915 PF04560 RNA polymerase Rpb2, domain 7 OF401_16915 PF04561 RNA polymerase Rpb2, domain 2 OF401_16915 PF04565 RNA polymerase Rpb2, domain 3 OF401_16915 PF10385 RNA polymerase beta subunit external 1 domain OF401_16915 PF00562 RNA polymerase Rpb2, domain 6 OF401_16915 PF04563 RNA polymerase beta subunit OF401_16920 PF00542 Ribosomal protein L7/L12 C-terminal domain OF401_16920 PF16320 Ribosomal protein L7/L12 dimerisation domain OF401_16925 PF00466 Ribosomal protein L10 OF401_16930 PF00687 Ribosomal protein L1p/L10e family OF401_16935 PF03946 Ribosomal protein L11, N-terminal domain OF401_16935 PF00298 Ribosomal protein L11, RNA binding domain OF401_16940 PF00467 KOW motif OF401_16940 PF02357 Transcription termination factor nusG OF401_16945 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OF401_16955 PF00009 Elongation factor Tu GTP binding domain OF401_16955 PF03144 Elongation factor Tu domain 2 OF401_16955 PF03143 Elongation factor Tu C-terminal domain OF401_16975 PF01926 50S ribosome-binding GTPase OF401_16975 PF06071 Protein of unknown function (DUF933) OF401_16980 PF01195 Peptidyl-tRNA hydrolase OF401_16985 PF14693 Ribosomal protein TL5, C-terminal domain OF401_16985 PF01386 Ribosomal L25p family OF401_16990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OF401_16990 PF14572 Phosphoribosyl synthetase-associated domain OF401_17000 PF08544 GHMP kinases C terminal OF401_17000 PF00288 GHMP kinases N terminal domain OF401_17005 PF03550 Outer membrane lipoprotein LolB OF401_17020 PF00472 RF-1 domain OF401_17020 PF03462 PCRF domain OF401_17030 PF00994 Probable molybdopterin binding domain OF401_17035 PF03976 Polyphosphate kinase 2 (PPK2) OF401_17045 PF00708 Acylphosphatase OF401_17050 PF08534 Redoxin OF401_17055 PF03631 Virulence factor BrkB OF401_17060 PF03358 NADPH-dependent FMN reductase OF401_17070 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain OF401_17070 PF17189 Glycosyl hydrolase family 30 beta sandwich domain OF401_17080 PF04073 Aminoacyl-tRNA editing domain OF401_17085 PF00082 Subtilase family OF401_17085 PF04151 Bacterial pre-peptidase C-terminal domain OF401_17095 PF04151 Bacterial pre-peptidase C-terminal domain OF401_17095 PF00082 Subtilase family OF401_17100 PF01063 Amino-transferase class IV OF401_17165 PF00881 Nitroreductase family OF401_17170 PF01367 5'-3' exonuclease, C-terminal SAM fold OF401_17170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OF401_17170 PF00476 DNA polymerase family A OF401_17170 PF01612 3'-5' exonuclease OF401_17175 PF00293 NUDIX domain OF401_17185 PF00561 alpha/beta hydrolase fold OF401_17190 PF05175 Methyltransferase small domain OF401_17190 PF17827 PrmC N-terminal domain OF401_17195 PF10417 C-terminal domain of 1-Cys peroxiredoxin OF401_17195 PF00578 AhpC/TSA family OF401_17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_17200 PF13192 Thioredoxin domain OF401_17205 PF03466 LysR substrate binding domain OF401_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_17210 PF14760 Rnk N-terminus OF401_17210 PF01272 Transcription elongation factor, GreA/GreB, C-term OF401_17215 PF00923 Transaldolase/Fructose-6-phosphate aldolase OF401_17225 PF01625 Peptide methionine sulfoxide reductase OF401_17235 PF00072 Response regulator receiver domain OF401_17235 PF00196 Bacterial regulatory proteins, luxR family OF401_17240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OF401_17240 PF00072 Response regulator receiver domain OF401_17240 PF01627 Hpt domain OF401_17240 PF00512 His Kinase A (phospho-acceptor) domain OF401_17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_17240 PF00672 HAMP domain OF401_17245 PF00990 Diguanylate cyclase, GGDEF domain OF401_17245 PF00072 Response regulator receiver domain OF401_17260 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OF401_17260 PF00749 tRNA synthetases class I (E and Q), catalytic domain OF401_17265 PF12833 Helix-turn-helix domain OF401_17265 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OF401_17270 PF00892 EamA-like transporter family OF401_17290 PF18125 RlmM ferredoxin-like domain OF401_17290 PF01728 FtsJ-like methyltransferase OF401_17295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OF401_17295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OF401_17300 PF08450 SMP-30/Gluconolactonase/LRE-like region OF401_17320 PF00378 Enoyl-CoA hydratase/isomerase OF401_17325 PF00171 Aldehyde dehydrogenase family OF401_17330 PF00501 AMP-binding enzyme OF401_17330 PF13193 AMP-binding enzyme C-terminal domain OF401_17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_17335 PF03466 LysR substrate binding domain OF401_17340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OF401_17340 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit OF401_17345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OF401_17350 PF00392 Bacterial regulatory proteins, gntR family OF401_17350 PF07729 FCD domain OF401_17370 PF01494 FAD binding domain OF401_17375 PF01494 FAD binding domain OF401_17385 PF01923 Cobalamin adenosyltransferase OF401_17390 PF00850 Histone deacetylase domain OF401_17395 PF04453 LPS transport system D OF401_17395 PF03968 OstA-like protein OF401_17400 PF00639 PPIC-type PPIASE domain OF401_17400 PF09312 SurA N-terminal domain OF401_17405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OF401_17410 PF00398 Ribosomal RNA adenine dimethylase OF401_17415 PF04379 ApaG domain OF401_17420 PF00149 Calcineurin-like phosphoesterase OF401_17425 PF00186 Dihydrofolate reductase OF401_17430 PF00303 Thymidylate synthase OF401_17435 PF01790 Prolipoprotein diacylglyceryl transferase OF401_17455 PF01219 Prokaryotic diacylglycerol kinase OF401_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_17465 PF08521 Two-component sensor kinase N-terminal OF401_17465 PF00512 His Kinase A (phospho-acceptor) domain OF401_17470 PF00072 Response regulator receiver domain OF401_17470 PF00486 Transcriptional regulatory protein, C terminal OF401_17475 PF13472 GDSL-like Lipase/Acylhydrolase family OF401_17480 PF00005 ABC transporter OF401_17490 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OF401_17500 PF00005 ABC transporter OF401_17505 PF00528 Binding-protein-dependent transport system inner membrane component OF401_17525 PF07715 TonB-dependent Receptor Plug Domain OF401_17525 PF00593 TonB dependent receptor OF401_17535 PF00248 Aldo/keto reductase family OF401_17540 PF07670 Nucleoside recognition OF401_17540 PF07662 Na+ dependent nucleoside transporter C-terminus OF401_17540 PF01773 Na+ dependent nucleoside transporter N-terminus OF401_17545 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OF401_17545 PF00294 pfkB family carbohydrate kinase OF401_17550 PF01207 Dihydrouridine synthase (Dus) OF401_17560 PF02773 S-adenosylmethionine synthetase, C-terminal domain OF401_17560 PF02772 S-adenosylmethionine synthetase, central domain OF401_17560 PF00438 S-adenosylmethionine synthetase, N-terminal domain OF401_17570 PF00328 Histidine phosphatase superfamily (branch 2) OF401_17585 PF00691 OmpA family OF401_17585 PF01389 OmpA-like transmembrane domain OF401_17605 PF00311 Phosphoenolpyruvate carboxylase OF401_17615 PF05221 S-adenosyl-L-homocysteine hydrolase OF401_17615 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OF401_17645 PF00128 Alpha amylase, catalytic domain OF401_17660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OF401_17680 PF14765 Polyketide synthase dehydratase OF401_17680 PF00550 Phosphopantetheine attachment site OF401_17680 PF08659 KR domain OF401_17680 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_17680 PF16197 Ketoacyl-synthetase C-terminal extension OF401_17680 PF00107 Zinc-binding dehydrogenase OF401_17680 PF00698 Acyl transferase domain OF401_17680 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_17680 PF08240 Alcohol dehydrogenase GroES-like domain OF401_17695 PF02219 Methylenetetrahydrofolate reductase OF401_17710 PF00293 NUDIX domain OF401_17720 PF02810 SEC-C motif OF401_17720 PF07517 SecA DEAD-like domain OF401_17720 PF01043 SecA preprotein cross-linking domain OF401_17720 PF07516 SecA Wing and Scaffold domain OF401_17725 PF01476 LysM domain OF401_17725 PF08525 Opacity-associated protein A N-terminal motif OF401_17725 PF01551 Peptidase family M23 OF401_17735 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OF401_17740 PF12327 FtsZ family, C-terminal domain OF401_17740 PF00091 Tubulin/FtsZ family, GTPase domain OF401_17745 PF02491 SHS2 domain inserted in FTSA OF401_17755 PF07478 D-ala D-ala ligase C-terminus OF401_17755 PF01820 D-ala D-ala ligase N-terminus OF401_17760 PF01225 Mur ligase family, catalytic domain OF401_17760 PF02875 Mur ligase family, glutamate ligase domain OF401_17760 PF08245 Mur ligase middle domain OF401_17765 PF04101 Glycosyltransferase family 28 C-terminal domain OF401_17765 PF03033 Glycosyltransferase family 28 N-terminal domain OF401_17770 PF01098 Cell cycle protein OF401_17775 PF00953 Glycosyl transferase family 4 OF401_17780 PF01225 Mur ligase family, catalytic domain OF401_17780 PF02875 Mur ligase family, glutamate ligase domain OF401_17780 PF08245 Mur ligase middle domain OF401_17785 PF01225 Mur ligase family, catalytic domain OF401_17785 PF08245 Mur ligase middle domain OF401_17785 PF02875 Mur ligase family, glutamate ligase domain OF401_17790 PF03717 Penicillin-binding Protein dimerisation domain OF401_17790 PF00905 Penicillin binding protein transpeptidase domain OF401_17795 PF04999 Cell division protein FtsL OF401_17800 PF01795 MraW methylase family OF401_17805 PF02381 MraZ protein, putative antitoxin-like OF401_17830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OF401_17840 PF02021 Uncharacterised protein family UPF0102 OF401_17845 PF04307 LexA-binding, inner membrane-associated putative hydrolase OF401_17850 PF02913 FAD linked oxidases, C-terminal domain OF401_17850 PF01565 FAD binding domain OF401_17860 PF00072 Response regulator receiver domain OF401_17860 PF00486 Transcriptional regulatory protein, C terminal OF401_17865 PF00512 His Kinase A (phospho-acceptor) domain OF401_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_17865 PF13492 GAF domain OF401_17865 PF13493 Domain of unknown function (DUF4118) OF401_17865 PF02702 Osmosensitive K+ channel His kinase sensor domain OF401_17870 PF02669 K+-transporting ATPase, c chain OF401_17880 PF03814 Potassium-transporting ATPase A subunit OF401_17895 PF00586 AIR synthase related protein, N-terminal domain OF401_17895 PF02769 AIR synthase related protein, C-terminal domain OF401_17900 PF01029 NusB family OF401_17905 PF00885 6,7-dimethyl-8-ribityllumazine synthase OF401_17910 PF00925 GTP cyclohydrolase II OF401_17910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OF401_17915 PF00677 Lumazine binding domain OF401_17925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OF401_17925 PF01872 RibD C-terminal domain OF401_17935 PF03477 ATP cone domain OF401_17940 PF00464 Serine hydroxymethyltransferase OF401_17950 PF00005 ABC transporter OF401_17950 PF12848 ABC transporter OF401_17955 PF01327 Polypeptide deformylase OF401_17960 PF03960 ArsC family OF401_17975 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) OF401_17980 PF01270 Glycosyl hydrolases family 8 OF401_17985 PF03170 Bacterial cellulose synthase subunit OF401_17990 PF03552 Cellulose synthase OF401_17990 PF00535 Glycosyl transferase family 2 OF401_17990 PF07238 PilZ domain OF401_18005 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OF401_18005 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OF401_18045 PF00593 TonB dependent receptor OF401_18045 PF07715 TonB-dependent Receptor Plug Domain OF401_18055 PF00392 Bacterial regulatory proteins, gntR family OF401_18055 PF07702 UTRA domain OF401_18065 PF00263 Bacterial type II and III secretion system protein OF401_18065 PF03958 Bacterial type II/III secretion system short domain OF401_18075 PF10741 Type II secretion system (T2SS), protein M subtype b OF401_18080 PF05137 Fimbrial assembly protein (PilN) OF401_18085 PF03934 Type II secretion system (T2SS), protein K OF401_18095 PF07963 Prokaryotic N-terminal methylation motif OF401_18100 PF12019 Type II transport protein GspH OF401_18105 PF08334 Type II secretion system (T2SS), protein G OF401_18110 PF00482 Type II secretion system (T2SS), protein F OF401_18115 PF00437 Type II/IV secretion system protein OF401_18115 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OF401_18120 PF04151 Bacterial pre-peptidase C-terminal domain OF401_18120 PF00082 Subtilase family OF401_18125 PF03895 YadA-like membrane anchor domain OF401_18125 PF13018 Extended Signal Peptide of Type V secretion system OF401_18125 PF05658 Head domain of trimeric autotransporter adhesin OF401_18125 PF05662 Coiled stalk of trimeric autotransporter adhesin OF401_18135 PF02769 AIR synthase related protein, C-terminal domain OF401_18135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OF401_18135 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OF401_18140 PF10411 Disulfide bond isomerase protein N-terminus OF401_18140 PF13098 Thioredoxin-like domain OF401_18145 PF02899 Phage integrase, N-terminal SAM-like domain OF401_18145 PF00589 Phage integrase family OF401_18160 PF03739 Lipopolysaccharide export system permease LptF/LptG OF401_18170 PF00883 Cytosol aminopeptidase family, catalytic domain OF401_18170 PF02789 Cytosol aminopeptidase family, N-terminal domain OF401_18190 PF08264 Anticodon-binding domain of tRNA OF401_18190 PF00133 tRNA synthetases class I (I, L, M and V) OF401_18190 PF10458 Valyl tRNA synthetase tRNA binding arm OF401_18205 PF00544 Pectate lyase OF401_18210 PF00544 Pectate lyase OF401_18225 PF01066 CDP-alcohol phosphatidyltransferase OF401_18235 PF03129 Anticodon binding domain OF401_18235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OF401_18235 PF04073 Aminoacyl-tRNA editing domain OF401_18240 PF00816 H-NS histone family OF401_18250 PF02405 Permease MlaE OF401_18255 PF00005 ABC transporter OF401_18260 PF03886 ABC-type transport auxiliary lipoprotein component OF401_18260 PF02470 MlaD protein OF401_18285 PF14307 Glycosyltransferase WbsX OF401_18285 PF05045 Rhamnan synthesis protein F OF401_18290 PF01144 Coenzyme A transferase OF401_18295 PF01144 Coenzyme A transferase OF401_18300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OF401_18300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OF401_18300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OF401_18300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OF401_18305 PF01050 Mannose-6-phosphate isomerase OF401_18305 PF00483 Nucleotidyl transferase OF401_18310 PF04321 RmlD substrate binding domain OF401_18315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase OF401_18320 PF00483 Nucleotidyl transferase OF401_18325 PF16363 GDP-mannose 4,6 dehydratase OF401_18330 PF01012 Electron transfer flavoprotein domain OF401_18335 PF01012 Electron transfer flavoprotein domain OF401_18335 PF00766 Electron transfer flavoprotein FAD-binding domain OF401_18340 PF00483 Nucleotidyl transferase OF401_18340 PF01050 Mannose-6-phosphate isomerase OF401_18345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OF401_18350 PF00535 Glycosyl transferase family 2 OF401_18385 PF16363 GDP-mannose 4,6 dehydratase OF401_18390 PF16363 GDP-mannose 4,6 dehydratase OF401_18405 PF13439 Glycosyltransferase Family 4 OF401_18405 PF00534 Glycosyl transferases group 1 OF401_18410 PF00069 Protein kinase domain OF401_18410 PF13847 Methyltransferase domain OF401_18415 PF00005 ABC transporter OF401_18430 PF01053 Cys/Met metabolism PLP-dependent enzyme OF401_18435 PF00291 Pyridoxal-phosphate dependent enzyme OF401_18435 PF00571 CBS domain OF401_18455 PF00437 Type II/IV secretion system protein OF401_18460 PF14497 Glutathione S-transferase, C-terminal domain OF401_18460 PF02798 Glutathione S-transferase, N-terminal domain OF401_18470 PF00271 Helicase conserved C-terminal domain OF401_18470 PF00270 DEAD/DEAH box helicase OF401_18475 PF01242 6-pyruvoyl tetrahydropterin synthase OF401_18490 PF13185 GAF domain OF401_18500 PF13419 Haloacid dehalogenase-like hydrolase OF401_18505 PF00817 impB/mucB/samB family OF401_18505 PF11799 impB/mucB/samB family C-terminal domain OF401_18505 PF11798 IMS family HHH motif OF401_18510 PF07977 FabA-like domain OF401_18515 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_18515 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_18520 PF01432 Peptidase family M3 OF401_18525 PF00291 Pyridoxal-phosphate dependent enzyme OF401_18535 PF00394 Multicopper oxidase OF401_18535 PF07731 Multicopper oxidase OF401_18535 PF07732 Multicopper oxidase OF401_18540 PF05275 Copper resistance protein B precursor (CopB) OF401_18545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OF401_18575 PF01380 SIS domain OF401_18580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_18585 PF00005 ABC transporter OF401_18590 PF12704 MacB-like periplasmic core domain OF401_18590 PF00005 ABC transporter OF401_18590 PF02687 FtsX-like permease family OF401_18595 PF12704 MacB-like periplasmic core domain OF401_18595 PF02687 FtsX-like permease family OF401_18595 PF00005 ABC transporter OF401_18610 PF00512 His Kinase A (phospho-acceptor) domain OF401_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_18625 PF00132 Bacterial transferase hexapeptide (six repeats) OF401_18625 PF14602 Hexapeptide repeat of succinyl-transferase OF401_18625 PF12804 MobA-like NTP transferase domain OF401_18640 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain OF401_18640 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OF401_18645 PF02874 ATP synthase alpha/beta family, beta-barrel domain OF401_18645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OF401_18650 PF00231 ATP synthase OF401_18655 PF00306 ATP synthase alpha/beta chain, C terminal domain OF401_18655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OF401_18655 PF02874 ATP synthase alpha/beta family, beta-barrel domain OF401_18660 PF00213 ATP synthase delta (OSCP) subunit OF401_18665 PF00430 ATP synthase B/B' CF(0) OF401_18670 PF00137 ATP synthase subunit C OF401_18675 PF00119 ATP synthase A chain OF401_18690 PF01979 Amidohydrolase family OF401_18695 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_18695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OF401_18705 PF00364 Biotin-requiring enzyme OF401_18705 PF02817 e3 binding domain OF401_18705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OF401_18740 PF03180 NLPA lipoprotein OF401_18745 PF00528 Binding-protein-dependent transport system inner membrane component OF401_18750 PF00005 ABC transporter OF401_18750 PF09383 NIL domain OF401_18755 PF00892 EamA-like transporter family OF401_18760 PF04461 Protein of unknown function (DUF520) OF401_18785 PF13419 Haloacid dehalogenase-like hydrolase OF401_18790 PF00849 RNA pseudouridylate synthase OF401_18790 PF01479 S4 domain OF401_18795 PF05175 Methyltransferase small domain OF401_18795 PF08468 Methyltransferase small domain N-terminal OF401_18805 PF07995 Glucose / Sorbosone dehydrogenase OF401_18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_18815 PF00672 HAMP domain OF401_18815 PF00512 His Kinase A (phospho-acceptor) domain OF401_18815 PF00989 PAS fold OF401_18815 PF18698 Histidine kinase sensor domain OF401_18835 PF00842 Alanine racemase, C-terminal domain OF401_18835 PF01168 Alanine racemase, N-terminal domain OF401_18840 PF01266 FAD dependent oxidoreductase OF401_18845 PF01037 Lrp/AsnC ligand binding domain OF401_18855 PF01641 SelR domain OF401_18865 PF01618 MotA/TolQ/ExbB proton channel family OF401_18870 PF00691 OmpA family OF401_18870 PF13677 Membrane MotB of proton-channel complex MotA/MotB OF401_18895 PF01061 ABC-2 type transporter OF401_18900 PF00005 ABC transporter OF401_18905 PF00999 Sodium/hydrogen exchanger family OF401_18910 PF03795 YCII-related domain OF401_18915 PF02469 Fasciclin domain OF401_18920 PF03167 Uracil DNA glycosylase superfamily OF401_18930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OF401_18935 PF03466 LysR substrate binding domain OF401_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_18940 PF03358 NADPH-dependent FMN reductase OF401_18945 PF00248 Aldo/keto reductase family OF401_18955 PF05649 Peptidase family M13 OF401_18955 PF01431 Peptidase family M13 OF401_18970 PF13520 Amino acid permease OF401_18980 PF04397 LytTr DNA-binding domain OF401_18980 PF00072 Response regulator receiver domain OF401_18985 PF02743 Cache domain OF401_18985 PF00672 HAMP domain OF401_18985 PF06580 Histidine kinase OF401_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_19005 PF00857 Isochorismatase family OF401_19010 PF05974 Domain of unknown function (DUF892) OF401_19015 PF05974 Domain of unknown function (DUF892) OF401_19020 PF05067 Manganese containing catalase OF401_19035 PF03705 CheR methyltransferase, all-alpha domain OF401_19035 PF08448 PAS fold OF401_19035 PF01339 CheB methylesterase OF401_19035 PF01739 CheR methyltransferase, SAM binding domain OF401_19050 PF02954 Bacterial regulatory protein, Fis family OF401_19050 PF00072 Response regulator receiver domain OF401_19050 PF00158 Sigma-54 interaction domain OF401_19060 PF01654 Cytochrome bd terminal oxidase subunit I OF401_19065 PF02322 Cytochrome bd terminal oxidase subunit II OF401_19085 PF16363 GDP-mannose 4,6 dehydratase OF401_19095 PF03275 UDP-galactopyranose mutase OF401_19105 PF00664 ABC transporter transmembrane region OF401_19105 PF00005 ABC transporter OF401_19120 PF08240 Alcohol dehydrogenase GroES-like domain OF401_19120 PF13823 Alcohol dehydrogenase GroES-associated OF401_19120 PF00107 Zinc-binding dehydrogenase OF401_19160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OF401_19160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OF401_19190 PF07715 TonB-dependent Receptor Plug Domain OF401_19190 PF00593 TonB dependent receptor OF401_19205 PF00005 ABC transporter OF401_19215 PF03466 LysR substrate binding domain OF401_19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_19220 PF01042 Endoribonuclease L-PSP OF401_19240 PF00248 Aldo/keto reductase family OF401_19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_19245 PF03466 LysR substrate binding domain OF401_19270 PF04546 Sigma-70, non-essential region OF401_19270 PF00140 Sigma-70 factor, region 1.2 OF401_19270 PF04545 Sigma-70, region 4 OF401_19270 PF04539 Sigma-70 region 3 OF401_19270 PF04542 Sigma-70 region 2 OF401_19270 PF03979 Sigma-70 factor, region 1.1 OF401_19275 PF02580 D-Tyr-tRNA(Tyr) deacylase OF401_19280 PF03279 Bacterial lipid A biosynthesis acyltransferase OF401_19290 PF00925 GTP cyclohydrolase II OF401_19310 PF00535 Glycosyl transferase family 2 OF401_19325 PF01189 16S rRNA methyltransferase RsmB/F OF401_19325 PF01029 NusB family OF401_19330 PF02911 Formyl transferase, C-terminal domain OF401_19330 PF00551 Formyl transferase OF401_19335 PF01327 Polypeptide deformylase OF401_19340 PF01476 LysM domain OF401_19345 PF02481 DNA recombination-mediator protein A OF401_19345 PF17782 DprA winged helix domain OF401_19350 PF04361 Protein of unknown function (DUF494) OF401_19355 PF00114 Pilin (bacterial filament) OF401_19355 PF07963 Prokaryotic N-terminal methylation motif OF401_19365 PF13368 Topoisomerase C-terminal repeat OF401_19365 PF01751 Toprim domain OF401_19365 PF01131 DNA topoisomerase OF401_19370 PF01300 Telomere recombination OF401_19385 PF00990 Diguanylate cyclase, GGDEF domain OF401_19385 PF01590 GAF domain OF401_19385 PF00360 Phytochrome region OF401_19385 PF00563 EAL domain OF401_19400 PF01343 Peptidase family S49 OF401_19405 PF01554 MatE OF401_19420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OF401_19420 PF18074 Primosomal protein N C-terminal domain OF401_19420 PF00270 DEAD/DEAH box helicase OF401_19420 PF00271 Helicase conserved C-terminal domain OF401_19420 PF17764 3′ DNA-binding domain (3′BD) OF401_19425 PF00043 Glutathione S-transferase, C-terminal domain OF401_19425 PF13417 Glutathione S-transferase, N-terminal domain OF401_19440 PF07992 Pyridine nucleotide-disulphide oxidoreductase OF401_19445 PF03458 UPF0126 domain OF401_19450 PF04545 Sigma-70, region 4 OF401_19450 PF04542 Sigma-70 region 2 OF401_19455 PF03167 Uracil DNA glycosylase superfamily OF401_19460 PF01339 CheB methylesterase OF401_19460 PF00072 Response regulator receiver domain OF401_19465 PF18075 FtsX extracellular domain OF401_19470 PF00005 ABC transporter OF401_19475 PF00271 Helicase conserved C-terminal domain OF401_19475 PF00270 DEAD/DEAH box helicase OF401_19475 PF12300 ATP-dependent RNA helicase RhlB OF401_19480 PF00085 Thioredoxin OF401_19485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OF401_19485 PF07498 Rho termination factor, N-terminal domain OF401_19485 PF07497 Rho termination factor, RNA-binding domain OF401_19495 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) OF401_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_19500 PF03466 LysR substrate binding domain OF401_19510 PF03971 Monomeric isocitrate dehydrogenase OF401_19520 PF00756 Putative esterase OF401_19520 PF01476 LysM domain OF401_19525 PF14489 QueF-like protein OF401_19525 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OF401_19530 PF07687 Peptidase dimerisation domain OF401_19530 PF01546 Peptidase family M20/M25/M40 OF401_19535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_19540 PF00873 AcrB/AcrD/AcrF family OF401_19545 PF00873 AcrB/AcrD/AcrF family OF401_19560 PF04542 Sigma-70 region 2 OF401_19560 PF08281 Sigma-70, region 4 OF401_19565 PF07063 Domain of unknown function (DUF1338) OF401_19605 PF01427 D-ala-D-ala dipeptidase OF401_19610 PF01471 Putative peptidoglycan binding domain OF401_19610 PF04717 Type VI secretion system, phage-baseplate injector OF401_19625 PF01510 N-acetylmuramoyl-L-alanine amidase OF401_19635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OF401_19635 PF13378 Enolase C-terminal domain-like OF401_19645 PF13520 Amino acid permease OF401_19660 PF05360 yiaA/B two helix domain OF401_19665 PF07995 Glucose / Sorbosone dehydrogenase OF401_19670 PF14310 Fibronectin type III-like domain OF401_19670 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_19670 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_19675 PF02152 Dihydroneopterin aldolase OF401_19680 PF00814 Glycoprotease family OF401_19685 PF01165 Ribosomal protein S21 OF401_19690 PF09424 Yqey-like protein OF401_19695 PF03631 Virulence factor BrkB OF401_19700 PF01807 CHC2 zinc finger OF401_19700 PF08278 DNA primase DnaG DnaB-binding OF401_19700 PF08275 DNA primase catalytic core, N-terminal domain OF401_19700 PF10410 DnaB-helicase binding domain of primase OF401_19710 PF13593 SBF-like CPA transporter family (DUF4137) OF401_19715 PF02683 Cytochrome C biogenesis protein transmembrane region OF401_19715 PF11412 Disulphide bond corrector protein DsbC OF401_19720 PF01040 UbiA prenyltransferase family OF401_19745 PF00510 Cytochrome c oxidase subunit III OF401_19750 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 OF401_19760 PF00115 Cytochrome C and Quinol oxidase polypeptide I OF401_19765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OF401_19765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain OF401_19775 PF00171 Aldehyde dehydrogenase family OF401_19775 PF01619 Proline dehydrogenase OF401_19775 PF14850 DNA-binding domain of Proline dehydrogenase OF401_19775 PF18327 Proline utilization A proline dehydrogenase N-terminal domain OF401_19815 PF00579 tRNA synthetases class I (W and Y) OF401_19820 PF01551 Peptidase family M23 OF401_19820 PF04225 Opacity-associated protein A LysM-like domain OF401_19825 PF03702 Anhydro-N-acetylmuramic acid kinase OF401_19835 PF07690 Major Facilitator Superfamily OF401_19840 PF03372 Endonuclease/Exonuclease/phosphatase family OF401_19845 PF00156 Phosphoribosyl transferase domain OF401_19855 PF13614 AAA domain OF401_19860 PF17762 HTH domain found in ParB protein OF401_19860 PF02195 ParB-like nuclease domain OF401_19875 PF01370 NAD dependent epimerase/dehydratase family OF401_19880 PF00535 Glycosyl transferase family 2 OF401_19895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OF401_19895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OF401_19895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OF401_19895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OF401_19900 PF00692 dUTPase OF401_19905 PF02441 Flavoprotein OF401_19905 PF04127 DNA / pantothenate metabolism flavoprotein OF401_19910 PF04002 RadC-like JAB domain OF401_19915 PF03485 Arginyl tRNA synthetase N terminal domain OF401_19915 PF05746 DALR anticodon binding domain OF401_19915 PF00750 tRNA synthetases class I (R) OF401_19930 PF00106 short chain dehydrogenase OF401_19935 PF01757 Acyltransferase family OF401_19945 PF03033 Glycosyltransferase family 28 N-terminal domain OF401_19955 PF17810 Arginine decarboxylase helical bundle domain OF401_19955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OF401_19955 PF17944 Arginine decarboxylase C-terminal helical extension OF401_19960 PF17284 Spermidine synthase tetramerisation domain OF401_19975 PF00543 Nitrogen regulatory protein P-II OF401_19980 PF04380 Membrane fusogenic activity OF401_19985 PF01078 Magnesium chelatase, subunit ChlI OF401_19985 PF13335 Magnesium chelatase, subunit ChlI C-terminal OF401_20000 PF12792 CSS motif domain associated with EAL OF401_20000 PF00563 EAL domain OF401_20010 PF00487 Fatty acid desaturase OF401_20015 PF00970 Oxidoreductase FAD-binding domain OF401_20015 PF00111 2Fe-2S iron-sulfur cluster binding domain OF401_20015 PF00175 Oxidoreductase NAD-binding domain OF401_20020 PF00440 Bacterial regulatory proteins, tetR family OF401_20040 PF01139 tRNA-splicing ligase RtcB OF401_20085 PF08338 Domain of unknown function (DUF1731) OF401_20085 PF01370 NAD dependent epimerase/dehydratase family OF401_20100 PF00072 Response regulator receiver domain OF401_20100 PF00486 Transcriptional regulatory protein, C terminal OF401_20105 PF08521 Two-component sensor kinase N-terminal OF401_20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_20105 PF00512 His Kinase A (phospho-acceptor) domain OF401_20125 PF00595 PDZ domain OF401_20145 PF01594 AI-2E family transporter OF401_20150 PF13419 Haloacid dehalogenase-like hydrolase OF401_20155 PF00883 Cytosol aminopeptidase family, catalytic domain OF401_20155 PF02789 Cytosol aminopeptidase family, N-terminal domain OF401_20175 PF00072 Response regulator receiver domain OF401_20175 PF00196 Bacterial regulatory proteins, luxR family OF401_20180 PF07730 Histidine kinase OF401_20185 PF13533 Biotin-lipoyl like OF401_20195 PF00005 ABC transporter OF401_20215 PF00892 EamA-like transporter family OF401_20220 PF00892 EamA-like transporter family OF401_20250 PF00753 Metallo-beta-lactamase superfamily OF401_20255 PF00579 tRNA synthetases class I (W and Y) OF401_20260 PF05532 CsbD-like OF401_20275 PF00491 Arginase family OF401_20300 PF02223 Thymidylate kinase OF401_20305 PF12833 Helix-turn-helix domain OF401_20305 PF02311 AraC-like ligand binding domain OF401_20330 PF03309 Type III pantothenate kinase OF401_20335 PF02237 Biotin protein ligase C terminal domain OF401_20335 PF03099 Biotin/lipoate A/B protein ligase family OF401_20335 PF08279 HTH domain OF401_20345 PF06167 Glucose-regulated metallo-peptidase M90 OF401_20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_20365 PF00072 Response regulator receiver domain OF401_20365 PF00486 Transcriptional regulatory protein, C terminal OF401_20375 PF01207 Dihydrouridine synthase (Dus) OF401_20395 PF00199 Catalase OF401_20395 PF06628 Catalase-related immune-responsive OF401_20400 PF06733 DEAD_2 OF401_20400 PF13307 Helicase C-terminal domain OF401_20415 PF01488 Shikimate / quinate 5-dehydrogenase OF401_20415 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OF401_20415 PF08501 Shikimate dehydrogenase substrate binding domain OF401_20425 PF00258 Flavodoxin OF401_20425 PF00175 Oxidoreductase NAD-binding domain OF401_20425 PF00667 FAD binding domain OF401_20430 PF00490 Delta-aminolevulinic acid dehydratase OF401_20455 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OF401_20455 PF00326 Prolyl oligopeptidase family OF401_20460 PF00043 Glutathione S-transferase, C-terminal domain OF401_20460 PF02798 Glutathione S-transferase, N-terminal domain OF401_20480 PF04820 Tryptophan halogenase OF401_20500 PF00005 ABC transporter OF401_20510 PF01381 Helix-turn-helix OF401_20520 PF02583 Metal-sensitive transcriptional repressor OF401_20525 PF01545 Cation efflux family OF401_20530 PF01229 Glycosyl hydrolases family 39 OF401_20535 PF01383 CpcD/allophycocyanin linker domain OF401_20535 PF00175 Oxidoreductase NAD-binding domain OF401_20540 PF00005 ABC transporter OF401_20545 PF01061 ABC-2 type transporter OF401_20555 PF08546 Ketopantoate reductase PanE/ApbA C terminal OF401_20555 PF02558 Ketopantoate reductase PanE/ApbA OF401_20570 PF03061 Thioesterase superfamily OF401_20580 PF00258 Flavodoxin OF401_20585 PF00268 Ribonucleotide reductase, small chain OF401_20590 PF03477 ATP cone domain OF401_20590 PF02867 Ribonucleotide reductase, barrel domain OF401_20590 PF00317 Ribonucleotide reductase, all-alpha domain OF401_20600 PF00583 Acetyltransferase (GNAT) family OF401_20600 PF13380 CoA binding domain OF401_20600 PF13607 Succinyl-CoA ligase like flavodoxin domain OF401_20610 PF00571 CBS domain OF401_20610 PF01769 Divalent cation transporter OF401_20610 PF03448 MgtE intracellular N domain OF401_20615 PF00194 Eukaryotic-type carbonic anhydrase OF401_20620 PF00999 Sodium/hydrogen exchanger family OF401_20620 PF02254 TrkA-N domain OF401_20625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OF401_20625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OF401_20630 PF00723 Glycosyl hydrolases family 15 OF401_20635 PF01451 Low molecular weight phosphotyrosine protein phosphatase OF401_20645 PF05166 YcgL domain OF401_20650 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_20650 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_20660 PF00535 Glycosyl transferase family 2 OF401_20665 PF04820 Tryptophan halogenase OF401_20725 PF00550 Phosphopantetheine attachment site OF401_20730 PF04820 Tryptophan halogenase OF401_20760 PF01218 Coproporphyrinogen III oxidase OF401_20765 PF00476 DNA polymerase family A OF401_20765 PF01367 5'-3' exonuclease, C-terminal SAM fold OF401_20765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OF401_20765 PF01612 3'-5' exonuclease OF401_20785 PF12464 Maltose acetyltransferase OF401_20785 PF14602 Hexapeptide repeat of succinyl-transferase OF401_20795 PF13361 UvrD-like helicase C-terminal domain OF401_20795 PF00580 UvrD/REP helicase N-terminal domain OF401_20805 PF13091 PLD-like domain OF401_20805 PF13396 Phospholipase_D-nuclease N-terminal OF401_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_20810 PF03466 LysR substrate binding domain OF401_20815 PF03737 Aldolase/RraA OF401_20820 PF04303 PrpF protein OF401_20825 PF04909 Amidohydrolase OF401_20830 PF00471 Ribosomal protein L33 OF401_20835 PF00830 Ribosomal L28 family OF401_20845 PF00873 AcrB/AcrD/AcrF family OF401_20855 PF00529 HlyD membrane-fusion protein of T1SS OF401_20855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_20875 PF02527 rRNA small subunit methyltransferase G OF401_20880 PF09423 PhoD-like phosphatase OF401_20880 PF16655 PhoD-like phosphatase, N-terminal domain OF401_20885 PF01648 4'-phosphopantetheinyl transferase superfamily OF401_20890 PF04226 Transglycosylase associated protein OF401_20940 PF00480 ROK family OF401_20950 PF00639 PPIC-type PPIASE domain OF401_20960 PF00474 Sodium:solute symporter family OF401_20965 PF04341 Protein of unknown function, DUF485 OF401_20975 PF13193 AMP-binding enzyme C-terminal domain OF401_20975 PF00501 AMP-binding enzyme OF401_20975 PF16177 Acetyl-coenzyme A synthetase N-terminus OF401_20980 PF00072 Response regulator receiver domain OF401_20980 PF00196 Bacterial regulatory proteins, luxR family OF401_21000 PF04616 Glycosyl hydrolases family 43 OF401_21000 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OF401_21005 PF00248 Aldo/keto reductase family OF401_21020 PF01557 Fumarylacetoacetate (FAA) hydrolase family OF401_21025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OF401_21025 PF13378 Enolase C-terminal domain-like OF401_21035 PF05336 L-rhamnose mutarotase OF401_21040 PF07690 Major Facilitator Superfamily OF401_21045 PF01614 Bacterial transcriptional regulator OF401_21045 PF09339 IclR helix-turn-helix domain OF401_21060 PF02659 Putative manganese efflux pump OF401_21065 PF09456 RcsC Alpha-Beta-Loop (ABL) OF401_21065 PF00512 His Kinase A (phospho-acceptor) domain OF401_21065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_21065 PF00072 Response regulator receiver domain OF401_21070 PF01609 Transposase DDE domain OF401_21070 PF05598 Transposase domain (DUF772) OF401_21075 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain OF401_21075 PF06165 Glycosyltransferase family 36 OF401_21090 PF01011 PQQ enzyme repeat OF401_21090 PF13360 PQQ-like domain OF401_21090 PF13570 PQQ-like domain OF401_21110 PF04357 TamB, inner membrane protein subunit of TAM complex OF401_21115 PF01103 Surface antigen OF401_21115 PF17243 POTRA domain TamA domain 1 OF401_21120 PF05746 DALR anticodon binding domain OF401_21120 PF02092 Glycyl-tRNA synthetase beta subunit OF401_21125 PF02091 Glycyl-tRNA synthetase alpha subunit OF401_21130 PF00437 Type II/IV secretion system protein OF401_21130 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OF401_21135 PF00117 Glutamine amidotransferase class-I OF401_21135 PF00958 GMP synthase C terminal domain OF401_21145 PF00902 Sec-independent protein translocase protein (TatC) OF401_21150 PF02416 mttA/Hcf106 family OF401_21155 PF02416 mttA/Hcf106 family OF401_21165 PF00762 Ferrochelatase OF401_21170 PF12697 Alpha/beta hydrolase family OF401_21180 PF04381 Putative exonuclease, RdgC OF401_21185 PF01171 PP-loop family OF401_21200 PF00356 Bacterial regulatory proteins, lacI family OF401_21205 PF03648 Glycosyl hydrolase family 67 N-terminus OF401_21205 PF07488 Glycosyl hydrolase family 67 middle domain OF401_21205 PF07477 Glycosyl hydrolase family 67 C-terminus OF401_21215 PF13378 Enolase C-terminal domain-like OF401_21215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OF401_21220 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OF401_21220 PF04616 Glycosyl hydrolases family 43 OF401_21225 PF07691 PA14 domain OF401_21225 PF01915 Glycosyl hydrolase family 3 C-terminal domain OF401_21225 PF00933 Glycosyl hydrolase family 3 N terminal domain OF401_21225 PF14310 Fibronectin type III-like domain OF401_21230 PF01232 Mannitol dehydrogenase Rossmann domain OF401_21230 PF08125 Mannitol dehydrogenase C-terminal domain OF401_21270 PF08450 SMP-30/Gluconolactonase/LRE-like region OF401_21280 PF00331 Glycosyl hydrolase family 10 OF401_21285 PF02837 Glycosyl hydrolases family 2, sugar binding domain OF401_21285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OF401_21285 PF00703 Glycosyl hydrolases family 2 OF401_21285 PF16355 Domain of unknown function (DUF4982) OF401_21285 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OF401_21290 PF02614 Glucuronate isomerase OF401_21295 PF00331 Glycosyl hydrolase family 10 OF401_21295 PF03422 Carbohydrate binding module (family 6) OF401_21295 PF00553 Cellulose binding domain OF401_21315 PF04616 Glycosyl hydrolases family 43 OF401_21345 PF00698 Acyl transferase domain OF401_21345 PF14765 Polyketide synthase dehydratase OF401_21345 PF00550 Phosphopantetheine attachment site OF401_21345 PF02801 Beta-ketoacyl synthase, C-terminal domain OF401_21345 PF00109 Beta-ketoacyl synthase, N-terminal domain OF401_21345 PF16197 Ketoacyl-synthetase C-terminal extension OF401_21345 PF08240 Alcohol dehydrogenase GroES-like domain OF401_21345 PF08659 KR domain OF401_21345 PF00107 Zinc-binding dehydrogenase OF401_21350 PF01553 Acyltransferase OF401_21360 PF00356 Bacterial regulatory proteins, lacI family OF401_21375 PF04820 Tryptophan halogenase OF401_21380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OF401_21385 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) OF401_21390 PF04337 Protein of unknown function, DUF480 OF401_21400 PF13302 Acetyltransferase (GNAT) domain OF401_21405 PF00580 UvrD/REP helicase N-terminal domain OF401_21405 PF13361 UvrD-like helicase C-terminal domain OF401_21415 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) OF401_21420 PF00265 Thymidine kinase OF401_21425 PF00512 His Kinase A (phospho-acceptor) domain OF401_21425 PF08446 PAS fold OF401_21425 PF00360 Phytochrome region OF401_21425 PF01590 GAF domain OF401_21425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OF401_21430 PF04349 Periplasmic glucan biosynthesis protein, MdoG OF401_21445 PF06827 Zinc finger found in FPG and IleRS OF401_21445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OF401_21445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OF401_21475 PF03594 Benzoate membrane transport protein OF401_21485 PF00360 Phytochrome region OF401_21485 PF01590 GAF domain OF401_21485 PF13426 PAS domain OF401_21485 PF08446 PAS fold OF401_21490 PF01126 Heme oxygenase OF401_21495 PF07690 Major Facilitator Superfamily OF401_21500 PF01263 Aldose 1-epimerase OF401_21510 PF02810 SEC-C motif OF401_21520 PF01925 Sulfite exporter TauE/SafE OF401_21525 PF00593 TonB dependent receptor OF401_21525 PF07715 TonB-dependent Receptor Plug Domain OF401_21545 PF01227 GTP cyclohydrolase I OF401_21555 PF07869 Protein of unknown function (DUF1656) OF401_21560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OF401_21560 PF00529 HlyD membrane-fusion protein of T1SS OF401_21565 PF02321 Outer membrane efflux protein OF401_21570 PF04632 Fusaric acid resistance protein family OF401_21575 PF00083 Sugar (and other) transporter OF401_21585 PF03466 LysR substrate binding domain OF401_21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_21590 PF00106 short chain dehydrogenase OF401_21595 PF13091 PLD-like domain OF401_21595 PF13396 Phospholipase_D-nuclease N-terminal OF401_21665 PF00849 RNA pseudouridylate synthase OF401_21695 PF09386 Antitoxin ParD OF401_21710 PF13538 UvrD-like helicase C-terminal domain OF401_21715 PF00580 UvrD/REP helicase N-terminal domain OF401_21715 PF13361 UvrD-like helicase C-terminal domain OF401_21715 PF12705 PD-(D/E)XK nuclease superfamily OF401_21720 PF17946 RecC C-terminal domain OF401_21765 PF00005 ABC transporter OF401_21770 PF02405 Permease MlaE OF401_21775 PF02470 MlaD protein OF401_21780 PF05494 MlaC protein OF401_21790 PF04333 MlaA lipoprotein OF401_21800 PF00255 Glutathione peroxidase OF401_21810 PF02646 RmuC family OF401_21820 PF00107 Zinc-binding dehydrogenase OF401_21820 PF08240 Alcohol dehydrogenase GroES-like domain OF401_21825 PF03466 LysR substrate binding domain OF401_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OF401_21840 PF13520 Amino acid permease OF401_21850 PF07715 TonB-dependent Receptor Plug Domain OF401_21850 PF00593 TonB dependent receptor OF401_21855 PF10947 Protein of unknown function (DUF2628) OF401_21860 PF00990 Diguanylate cyclase, GGDEF domain OF401_21865 PF05651 Putative sugar diacid recognition OF401_21865 PF17853 GGDEF-like domain OF401_21865 PF13556 PucR C-terminal helix-turn-helix domain OF401_21870 PF02595 Glycerate kinase family OF401_21875 PF07690 Major Facilitator Superfamily OF401_21895 PF17785 PUA-like domain OF401_21895 PF10672 S-adenosylmethionine-dependent methyltransferase OF401_21900 PF03741 Integral membrane protein TerC family OF401_21905 PF01694 Rhomboid family OF401_21915 PF03009 Glycerophosphoryl diester phosphodiesterase family OF401_21935 PF01569 PAP2 superfamily OF401_21940 PF00593 TonB dependent receptor OF401_21945 PF01926 50S ribosome-binding GTPase OF401_21945 PF12631 MnmE helical domain OF401_21945 PF10396 GTP-binding protein TrmE N-terminus OF401_21950 PF01522 Polysaccharide deacetylase OF401_21955 PF14849 YidC periplasmic domain OF401_21955 PF02096 60Kd inner membrane protein OF401_21960 PF00825 Ribonuclease P OF401_21965 PF00468 Ribosomal protein L34 OF401_22010 PF02534 Type IV secretory system Conjugative DNA transfer OF401_22020 PF00437 Type II/IV secretion system protein OF401_22035 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OF401_22050 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OF401_22065 PF03743 Bacterial conjugation TrbI-like protein OF401_22085 PF01131 DNA topoisomerase OF401_22085 PF01751 Toprim domain OF401_22135 PF02796 Helix-turn-helix domain of resolvase OF401_22135 PF00239 Resolvase, N terminal domain