XC_0001 SM00382 ATPases associated with a variety of cellular activities XC_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain XC_0002 SM00480 DNA polymerase III beta subunit XC_0004 SM00387 Histidine kinase-like ATPases XC_0004 SM00433 TopoisomeraseII XC_0007 SM00028 Tetratricopeptide repeats XC_0014 SM00155 Phospholipase D. Active site motifs. XC_0015 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_0021 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_0021 SM00245 tail specific protease XC_0029 SM00829 Enoylreductase XC_0054 SM00487 DEAD-like helicases superfamily XC_0054 SM00490 helicase superfamily c-terminal domain XC_0072 SM00421 helix_turn_helix, Lux Regulon XC_0108 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XC_0114 SM00421 helix_turn_helix, Lux Regulon XC_0114 SM00448 cheY-homologous receiver domain XC_0118 SM00862 Transcriptional regulatory protein, C terminal XC_0141 SM00642 Alpha-amylase domain XC_0142 SM00642 Alpha-amylase domain XC_0143 SM00642 Alpha-amylase domain XC_0159 SM00354 helix_turn _helix lactose operon repressor XC_0166 SM00344 helix_turn_helix ASNC type XC_0170 SM00382 ATPases associated with a variety of cellular activities XC_0173 SM00382 ATPases associated with a variety of cellular activities XC_0184 SM00855 Phosphoglycerate mutase family XC_0185 SM00867 YceI-like domain XC_0186 SM00155 Phospholipase D. Active site motifs. XC_0188 SM00563 Phosphate acyltransferases XC_0190 SM00028 Tetratricopeptide repeats XC_0194 SM01230 XC_0194 XC_0195 SM00938 Nitrogen regulatory protein P-II XC_0197 SM00387 Histidine kinase-like ATPases XC_0197 SM00388 His Kinase A (phosphoacceptor) domain XC_0198 SM00382 ATPases associated with a variety of cellular activities XC_0198 SM00448 cheY-homologous receiver domain XC_0212 SM00450 Rhodanese Homology Domain XC_0238 SM00563 Phosphate acyltransferases XC_0245 SM00342 helix_turn_helix, arabinose operon control protein XC_0249 SM00100 Cyclic nucleotide-monophosphate binding domain XC_0249 SM00267 diguanylate cyclase XC_0254 SM00878 Biotin carboxylase C-terminal domain XC_0259 SM00953 XC_0259 XC_0267 SM00833 Cobalamin synthesis protein cobW C-terminal domain XC_0273 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_0280 SM00829 Enoylreductase XC_0285 SM00487 DEAD-like helicases superfamily XC_0285 SM00490 helicase superfamily c-terminal domain XC_0285 SM00847 Helicase associated domain (HA2) Add an annotation XC_0286 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_0286 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_0288 SM00095 Transthyretin XC_0300 SM00155 Phospholipase D. Active site motifs. XC_0323 SM00342 helix_turn_helix, arabinose operon control protein XC_0336 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_0362 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_0363 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_0367 SM00342 helix_turn_helix, arabinose operon control protein XC_0373 SM00420 helix_turn_helix, Deoxyribose operon repressor XC_0373 SM01134 XC_0373 XC_0376 SM00882 Coenzyme A transferase XC_0377 SM00882 Coenzyme A transferase XC_0381 SM00998 Adenylosuccinate lyase C-terminus XC_0385 SM00346 helix_turn_helix isocitrate lyase regulation XC_0386 SM00090 RIO-like kinase XC_0389 SM01228 XC_0389 XC_0400 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_0400 SM00876 Biotin and Thiamin Synthesis associated domain XC_0420 SM00267 diguanylate cyclase XC_0422 SM00642 Alpha-amylase domain XC_0423 SM00642 Alpha-amylase domain XC_0425 SM00642 Alpha-amylase domain XC_0427 SM00642 Alpha-amylase domain XC_0436 SM00822 XC_0436 XC_0438 SM00487 DEAD-like helicases superfamily XC_0438 SM00490 helicase superfamily c-terminal domain XC_0442 SM00326 Src homology 3 domains XC_0443 SM00861 Transketolase, pyrimidine binding domain XC_0449 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_0468 SM00271 DnaJ molecular chaperone homology domain XC_0472 SM00046 Diacylglycerol kinase catalytic domain (presumed) XC_0476 SM00487 DEAD-like helicases superfamily XC_0482 SM00903 Flavin reductase like domain XC_0486 SM00100 Cyclic nucleotide-monophosphate binding domain XC_0486 SM00419 helix_turn_helix, cAMP Regulatory protein XC_0495 SM00073 Histidine Phosphotransfer domain XC_0495 SM00387 Histidine kinase-like ATPases XC_0495 SM00388 His Kinase A (phosphoacceptor) domain XC_0495 SM00448 cheY-homologous receiver domain XC_0496 SM00052 Putative diguanylate phosphodiesterase XC_0496 SM00267 diguanylate cyclase XC_0496 SM00448 cheY-homologous receiver domain XC_0505 SM00563 Phosphate acyltransferases XC_0509 SM01209 XC_0509 XC_0509 SM01210 XC_0509 XC_0510 SM00798 AICARFT/IMPCHase bienzyme XC_0510 SM00851 MGS-like domain XC_0513 SM00195 Dual specificity phosphatase, catalytic domain XC_0517 SM00563 Phosphate acyltransferases XC_0522 SM00530 Helix-turn-helix XRE-family like proteins XC_0527 SM00878 Biotin carboxylase C-terminal domain XC_0534 SM00883 Chaperonin 10 Kd subunit XC_0536 SM00487 DEAD-like helicases superfamily XC_0536 SM00490 helicase superfamily c-terminal domain XC_0558 SM00965 Secretin and TonB N terminus short domain XC_0569 SM00867 YceI-like domain XC_0578 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XC_0580 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_0580 SM00895 XC_0580 XC_0584 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_0584 SM00331 Sigma factor PP2C-like phosphatases XC_0613 SM00267 diguanylate cyclase XC_0623 SM00062 Bacterial periplasmic substrate-binding proteins XC_0633 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_0633 SM01232 XC_0633 XC_0635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_0637 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_0637 SM00091 PAS domain XC_0637 SM00267 diguanylate cyclase XC_0638 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_0638 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_0638 SM01049 XC_0638 XC_0639 SM00637 XC_0639 XC_0641 SM00267 diguanylate cyclase XC_0648 SM00448 cheY-homologous receiver domain XC_0648 SM00850 LytTr DNA-binding domain XC_0668 SM00382 ATPases associated with a variety of cellular activities XC_0668 SM01086 C-terminal, D2-small domain, of ClpB protein XC_0675 SM00267 diguanylate cyclase XC_0676 SM01263 XC_0676 XC_0679 SM00564 beta-propeller repeat XC_0683 SM00062 Bacterial periplasmic substrate-binding proteins XC_0683 SM00248 ankyrin repeats XC_0689 SM00382 ATPases associated with a variety of cellular activities XC_0691 SM00268 Actin XC_0705 SM00710 Parallel beta-helix repeats XC_0708 SM00936 Penicillin-binding protein 5, C-terminal domain XC_0713 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_0714 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_0714 SM00245 tail specific protease XC_0725 SM01350 XC_0725 XC_0727 SM00749 bacterial OsmY and nodulation domain XC_0728 SM00387 Histidine kinase-like ATPases XC_0728 SM00388 His Kinase A (phosphoacceptor) domain XC_0729 SM00448 cheY-homologous receiver domain XC_0730 SM00387 Histidine kinase-like ATPases XC_0730 SM00388 His Kinase A (phosphoacceptor) domain XC_0730 SM00448 cheY-homologous receiver domain XC_0735 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XC_0740 SM00382 ATPases associated with a variety of cellular activities XC_0750 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_0750 SM00866 XC_0750 XC_0752 SM00354 helix_turn _helix lactose operon repressor XC_0755 SM00245 tail specific protease XC_0769 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_0769 SM00387 Histidine kinase-like ATPases XC_0769 SM00388 His Kinase A (phosphoacceptor) domain XC_0770 SM00448 cheY-homologous receiver domain XC_0770 SM00862 Transcriptional regulatory protein, C terminal XC_0775 SM00829 Enoylreductase XC_0796 SM00450 Rhodanese Homology Domain XC_0803 SM01154 XC_0803 XC_0805 SM00642 Alpha-amylase domain XC_0808 SM00354 helix_turn _helix lactose operon repressor XC_0812 SM00448 cheY-homologous receiver domain XC_0812 SM00862 Transcriptional regulatory protein, C terminal XC_0813 SM00387 Histidine kinase-like ATPases XC_0813 SM00388 His Kinase A (phosphoacceptor) domain XC_0816 SM00421 helix_turn_helix, Lux Regulon XC_0816 SM00448 cheY-homologous receiver domain XC_0818 SM00387 Histidine kinase-like ATPases XC_0818 SM00388 His Kinase A (phosphoacceptor) domain XC_0818 SM00448 cheY-homologous receiver domain XC_0821 SM00919 Malic enzyme, NAD binding domain XC_0821 SM01274 XC_0821 XC_0831 SM00267 diguanylate cyclase XC_0836 SM01329 XC_0836 XC_0837 SM00917 LeuA allosteric (dimerisation) domain XC_0843 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_0847 SM00862 Transcriptional regulatory protein, C terminal XC_0848 SM00342 helix_turn_helix, arabinose operon control protein XC_0875 SM00464 Found in ATP-dependent protease La (LON) XC_0891 SM00028 Tetratricopeptide repeats XC_0891 SM00421 helix_turn_helix, Lux Regulon XC_0905 SM01011 Aminopeptidase P, N-terminal domain XC_0907 SM00849 Metallo-beta-lactamase superfamily XC_0912 SM00382 ATPases associated with a variety of cellular activities XC_0913 SM00903 Flavin reductase like domain XC_0929 SM00861 Transketolase, pyrimidine binding domain XC_0932 SM00028 Tetratricopeptide repeats XC_0932 SM00327 von Willebrand factor (vWF) type A domain XC_0933 SM00327 von Willebrand factor (vWF) type A domain XC_0936 SM00382 ATPases associated with a variety of cellular activities XC_0937 SM00965 Secretin and TonB N terminus short domain XC_0947 SM00487 DEAD-like helicases superfamily XC_0947 SM00490 helicase superfamily c-terminal domain XC_0949 SM00858 XC_0949 XC_0951 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_0954 SM01130 XC_0954 XC_0956 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_0956 SM00954 Region found in RelA / SpoT proteins XC_0957 SM01409 XC_0957 XC_0958 SM00072 Guanylate kinase homologues. XC_0963 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_0972 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XC_0980 SM00506 Appr-1"-p processing enzyme XC_0987 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_0987 SM00387 Histidine kinase-like ATPases XC_1000 SM00967 RNA 2'-O ribose methyltransferase substrate binding XC_1006 SM00354 helix_turn _helix lactose operon repressor XC_1017 SM00869 Autotransporter beta-domain XC_1021 SM00530 Helix-turn-helix XRE-family like proteins XC_1036 SM00267 diguanylate cyclase XC_1046 SM00528 Domain in histone-like proteins of HNS family XC_1047 SM00642 Alpha-amylase domain XC_1049 SM00448 cheY-homologous receiver domain XC_1049 SM00862 Transcriptional regulatory protein, C terminal XC_1050 SM00387 Histidine kinase-like ATPases XC_1050 SM00388 His Kinase A (phosphoacceptor) domain XC_1061 SM00382 ATPases associated with a variety of cellular activities XC_1061 SM00448 cheY-homologous receiver domain XC_1062 SM00387 Histidine kinase-like ATPases XC_1062 SM00388 His Kinase A (phosphoacceptor) domain XC_1064 SM00881 CoA binding domain XC_1074 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_1074 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1075 SM00564 beta-propeller repeat XC_1088 SM00382 ATPases associated with a variety of cellular activities XC_1088 SM01086 C-terminal, D2-small domain, of ClpB protein XC_1100 SM00855 Phosphoglycerate mutase family XC_1102 SM00342 helix_turn_helix, arabinose operon control protein XC_1102 SM00871 Bacterial transcription activator, effector binding domain XC_1116 SM00382 ATPases associated with a variety of cellular activities XC_1125 SM00834 Putative regulatory protein XC_1133 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XC_1135 SM00860 SMI1 / KNR4 family XC_1136 SM00382 ATPases associated with a variety of cellular activities XC_1149 SM00091 PAS domain XC_1149 SM00911 HWE histidine kinase XC_1150 SM00448 cheY-homologous receiver domain XC_1158 SM00363 S4 RNA-binding domain XC_1160 SM00448 cheY-homologous receiver domain XC_1162 SM00341 Helicase and RNase D C-terminal XC_1162 SM00487 DEAD-like helicases superfamily XC_1162 SM00490 helicase superfamily c-terminal domain XC_1162 SM00956 XC_1162 XC_1164 SM00382 ATPases associated with a variety of cellular activities XC_1164 SM00487 DEAD-like helicases superfamily XC_1164 SM00490 helicase superfamily c-terminal domain XC_1164 SM00847 Helicase associated domain (HA2) Add an annotation XC_1173 SM00954 Region found in RelA / SpoT proteins XC_1178 SM00491 XC_1178 XC_1183 SM00448 cheY-homologous receiver domain XC_1184 SM00448 cheY-homologous receiver domain XC_1185 SM00260 Two component signalling adaptor domain XC_1186 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_1187 SM00073 Histidine Phosphotransfer domain XC_1187 SM00260 Two component signalling adaptor domain XC_1187 SM00387 Histidine kinase-like ATPases XC_1187 SM00448 cheY-homologous receiver domain XC_1187 SM01231 XC_1187 XC_1194 SM00327 von Willebrand factor (vWF) type A domain XC_1204 SM00487 DEAD-like helicases superfamily XC_1206 SM01040 BRO family, N-terminal domain XC_1216 SM01149 XC_1216 XC_1217 SM00758 XC_1217 XC_1217 SM01217 XC_1217 XC_1220 SM00636 XC_1220 XC_1221 SM00812 Alpha-L-fucosidase XC_1230 SM00244 prohibitin homologues XC_1246 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_1257 SM00867 YceI-like domain XC_1259 SM00867 YceI-like domain XC_1260 SM00387 Histidine kinase-like ATPases XC_1260 SM00388 His Kinase A (phosphoacceptor) domain XC_1260 SM00448 cheY-homologous receiver domain XC_1261 SM00387 Histidine kinase-like ATPases XC_1261 SM00388 His Kinase A (phosphoacceptor) domain XC_1261 SM00448 cheY-homologous receiver domain XC_1262 SM00387 Histidine kinase-like ATPases XC_1262 SM00388 His Kinase A (phosphoacceptor) domain XC_1262 SM00448 cheY-homologous receiver domain XC_1280 SM00422 helix_turn_helix, mercury resistance XC_1286 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_1295 SM00421 helix_turn_helix, Lux Regulon XC_1298 SM00656 XC_1298 XC_1303 SM00924 MgtE intracellular N domain XC_1312 SM00382 ATPases associated with a variety of cellular activities XC_1316 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_1339 SM00671 Sel1-like repeats. XC_1340 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XC_1346 SM00382 ATPases associated with a variety of cellular activities XC_1349 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XC_1355 SM00411 bacterial (prokaryotic) histone like domain XC_1358 SM00382 ATPases associated with a variety of cellular activities XC_1366 SM00732 Likely ribonuclease with RNase H fold. XC_1383 SM00267 diguanylate cyclase XC_1384 SM00829 Enoylreductase XC_1386 SM01092 CO dehydrogenase flavoprotein C-terminal domain XC_1387 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_1395 SM00248 ankyrin repeats XC_1404 SM00855 Phosphoglycerate mutase family XC_1408 SM00155 Phospholipase D. Active site motifs. XC_1409 SM00448 cheY-homologous receiver domain XC_1410 SM00138 Methyltransferase, chemotaxis proteins XC_1411 SM00052 Putative diguanylate phosphodiesterase XC_1411 SM00448 cheY-homologous receiver domain XC_1412 SM00260 Two component signalling adaptor domain XC_1413 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_1413 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1414 SM00073 Histidine Phosphotransfer domain XC_1414 SM00260 Two component signalling adaptor domain XC_1414 SM00387 Histidine kinase-like ATPases XC_1414 SM01231 XC_1414 XC_1416 SM00487 DEAD-like helicases superfamily XC_1416 SM00490 helicase superfamily c-terminal domain XC_1416 SM00982 XC_1416 XC_1416 SM01058 CarD-like/TRCF domain XC_1419 SM00448 cheY-homologous receiver domain XC_1419 SM00862 Transcriptional regulatory protein, C terminal XC_1421 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1421 SM00387 Histidine kinase-like ATPases XC_1421 SM00388 His Kinase A (phosphoacceptor) domain XC_1439 SM00342 helix_turn_helix, arabinose operon control protein XC_1452 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XC_1452 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_1457 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_1465 SM00342 helix_turn_helix, arabinose operon control protein XC_1465 SM00478 endonuclease III XC_1465 SM01009 AlkA N-terminal domain XC_1475 SM00487 DEAD-like helicases superfamily XC_1475 SM00490 helicase superfamily c-terminal domain XC_1476 SM00052 Putative diguanylate phosphodiesterase XC_1476 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_1476 SM00091 PAS domain XC_1476 SM00267 diguanylate cyclase XC_1477 SM00363 S4 RNA-binding domain XC_1484 SM00382 ATPases associated with a variety of cellular activities XC_1489 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XC_1507 SM00316 Ribosomal protein S1-like RNA-binding domain XC_1514 SM01351 XC_1514 XC_1518 SM00977 TilS substrate C-terminal domain XC_1519 SM00098 Alkaline phosphatase homologues XC_1526 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1526 SM00387 Histidine kinase-like ATPases XC_1526 SM00388 His Kinase A (phosphoacceptor) domain XC_1528 SM00382 ATPases associated with a variety of cellular activities XC_1528 SM00448 cheY-homologous receiver domain XC_1541 SM01160 XC_1541 XC_1553 SM00369 Leucine-rich repeats, typical (most populated) subfamily XC_1554 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_1561 SM00257 Lysin motif XC_1569 SM00859 Semialdehyde dehydrogenase, NAD binding domain XC_1582 SM00052 Putative diguanylate phosphodiesterase XC_1582 SM00267 diguanylate cyclase XC_1582 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1586 SM00822 XC_1586 XC_1594 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XC_1595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_1604 SM00316 Ribosomal protein S1-like RNA-binding domain XC_1604 SM00322 K homology RNA-binding domain XC_1608 SM01387 XC_1608 XC_1609 SM00316 Ribosomal protein S1-like RNA-binding domain XC_1609 SM00322 K homology RNA-binding domain XC_1613 SM01001 AIR carboxylase XC_1628 SM00487 DEAD-like helicases superfamily XC_1628 SM00490 helicase superfamily c-terminal domain XC_1639 SM00382 ATPases associated with a variety of cellular activities XC_1642 SM00642 Alpha-amylase domain XC_1648 SM00642 Alpha-amylase domain XC_1649 SM00354 helix_turn _helix lactose operon repressor XC_1650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XC_1655 SM00873 B3/4 domain XC_1655 SM00874 tRNA synthetase B5 domain XC_1655 SM00896 Ferredoxin-fold anticodon binding domain XC_1656 SM00411 bacterial (prokaryotic) histone like domain XC_1657 SM00422 helix_turn_helix, mercury resistance XC_1673 SM00849 Metallo-beta-lactamase superfamily XC_1678 SM00861 Transketolase, pyrimidine binding domain XC_1679 SM00507 HNH nucleases XC_1684 SM00465 GIY-YIG type nucleases (URI domain) XC_1686 SM00091 PAS domain XC_1686 SM00387 Histidine kinase-like ATPases XC_1686 SM00388 His Kinase A (phosphoacceptor) domain XC_1686 SM00448 cheY-homologous receiver domain XC_1691 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_1691 SM00091 PAS domain XC_1691 SM00387 Histidine kinase-like ATPases XC_1691 SM00388 His Kinase A (phosphoacceptor) domain XC_1691 SM00448 cheY-homologous receiver domain XC_1694 SM00478 endonuclease III XC_1695 SM00382 ATPases associated with a variety of cellular activities XC_1695 SM00962 SRP54-type protein, GTPase domain XC_1695 SM00963 SRP54-type protein, helical bundle domain XC_1696 SM00342 helix_turn_helix, arabinose operon control protein XC_1701 SM01130 XC_1701 XC_1721 SM00387 Histidine kinase-like ATPases XC_1734 SM00344 helix_turn_helix ASNC type XC_1737 SM01323 XC_1737 XC_1745 SM00354 helix_turn _helix lactose operon repressor XC_1752 SM00342 helix_turn_helix, arabinose operon control protein XC_1755 SM00448 cheY-homologous receiver domain XC_1755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_1756 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_1756 SM00091 PAS domain XC_1756 SM00387 Histidine kinase-like ATPases XC_1756 SM00388 His Kinase A (phosphoacceptor) domain XC_1756 SM00448 cheY-homologous receiver domain XC_1756 SM01079 XC_1756 XC_1766 SM00267 diguanylate cyclase XC_1766 SM00448 cheY-homologous receiver domain XC_1768 SM01230 XC_1768 XC_1770 SM01230 XC_1770 XC_1776 SM00382 ATPases associated with a variety of cellular activities XC_1783 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_1783 SM01091 Transporter associated domain XC_1788 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_1799 SM00487 DEAD-like helicases superfamily XC_1799 SM00490 helicase superfamily c-terminal domain XC_1801 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_1801 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1802 SM00260 Two component signalling adaptor domain XC_1803 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_1803 SM00267 diguanylate cyclase XC_1806 SM00528 Domain in histone-like proteins of HNS family XC_1809 SM00474 3'-5' exonuclease XC_1816 SM00646 XC_1816 XC_1817 SM00853 MutL C terminal dimerisation domain XC_1817 SM01340 XC_1817 XC_1821 SM00822 XC_1821 XC_1824 SM00052 Putative diguanylate phosphodiesterase XC_1824 SM00267 diguanylate cyclase XC_1826 SM01322 XC_1826 XC_1828 SM00357 Cold shock protein domain XC_1833 SM00487 DEAD-like helicases superfamily XC_1833 SM00490 helicase superfamily c-terminal domain XC_1834 SM00382 ATPases associated with a variety of cellular activities XC_1841 SM00052 Putative diguanylate phosphodiesterase XC_1841 SM00267 diguanylate cyclase XC_1841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1843 SM00841 Elongation factor P, C-terminal XC_1843 SM01185 XC_1843 XC_1852 SM00849 Metallo-beta-lactamase superfamily XC_1859 SM01234 XC_1859 XC_1867 SM00840 XC_1867 XC_1875 SM00859 Semialdehyde dehydrogenase, NAD binding domain XC_1879 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XC_1881 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XC_1886 SM00382 ATPases associated with a variety of cellular activities XC_1887 SM00382 ATPases associated with a variety of cellular activities XC_1890 SM00028 Tetratricopeptide repeats XC_1898 SM00382 ATPases associated with a variety of cellular activities XC_1904 SM00363 S4 RNA-binding domain XC_1909 SM00354 helix_turn _helix lactose operon repressor XC_1924 SM00316 Ribosomal protein S1-like RNA-binding domain XC_1925 SM00411 bacterial (prokaryotic) histone like domain XC_1927 SM00028 Tetratricopeptide repeats XC_1929 SM00822 XC_1929 XC_1934 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_1934 SM01240 XC_1934 XC_1937 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_1938 SM00421 helix_turn_helix, Lux Regulon XC_1938 SM00448 cheY-homologous receiver domain XC_1939 SM00387 Histidine kinase-like ATPases XC_1940 SM00342 helix_turn_helix, arabinose operon control protein XC_1948 SM00529 Helix-turn-helix diphteria tox regulatory element XC_1950 SM00479 XC_1950 XC_1964 SM00316 Ribosomal protein S1-like RNA-binding domain XC_1964 SM00732 Likely ribonuclease with RNase H fold. XC_1965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_1965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_1965 SM00091 PAS domain XC_1965 SM00387 Histidine kinase-like ATPases XC_1965 SM00388 His Kinase A (phosphoacceptor) domain XC_1965 SM00448 cheY-homologous receiver domain XC_1966 SM00448 cheY-homologous receiver domain XC_1978 SM00382 ATPases associated with a variety of cellular activities XC_1989 SM00382 ATPases associated with a variety of cellular activities XC_1992 SM00849 Metallo-beta-lactamase superfamily XC_1995 SM00382 ATPases associated with a variety of cellular activities XC_1998 SM00226 Low molecular weight phosphatase family XC_2000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XC_2000 SM00465 GIY-YIG type nucleases (URI domain) XC_2008 SM01126 XC_2008 XC_2022 SM00953 XC_2022 XC_2046 SM00487 DEAD-like helicases superfamily XC_2064 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XC_2064 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XC_2064 SM00493 XC_2064 XC_2075 SM00530 Helix-turn-helix XRE-family like proteins XC_2079 SM00974 XC_2079 XC_2090 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_2091 SM00984 UDP binding domain XC_2095 SM00450 Rhodanese Homology Domain XC_2096 SM00421 helix_turn_helix, Lux Regulon XC_2096 SM00448 cheY-homologous receiver domain XC_2098 SM00316 Ribosomal protein S1-like RNA-binding domain XC_2099 SM00363 S4 RNA-binding domain XC_2128 SM01068 Putative carbohydrate binding domain XC_2129 SM00091 PAS domain XC_2129 SM00387 Histidine kinase-like ATPases XC_2130 SM00448 cheY-homologous receiver domain XC_2136 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2136 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2149 SM00318 Staphylococcal nuclease homologues XC_2153 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_2153 SM00387 Histidine kinase-like ATPases XC_2153 SM00388 His Kinase A (phosphoacceptor) domain XC_2159 SM00869 Autotransporter beta-domain XC_2160 SM00869 Autotransporter beta-domain XC_2161 SM00052 Putative diguanylate phosphodiesterase XC_2172 SM00858 XC_2172 XC_2175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XC_2180 SM00448 cheY-homologous receiver domain XC_2180 SM01012 XC_2180 XC_2184 SM00852 Probable molybdopterin binding domain XC_2195 SM00450 Rhodanese Homology Domain XC_2196 SM00852 Probable molybdopterin binding domain XC_2197 SM00382 ATPases associated with a variety of cellular activities XC_2198 SM00564 beta-propeller repeat XC_2201 SM00028 Tetratricopeptide repeats XC_2203 SM00562 XC_2203 XC_2209 SM00382 ATPases associated with a variety of cellular activities XC_2213 SM00382 ATPases associated with a variety of cellular activities XC_2213 SM00843 XC_2213 XC_2217 SM00316 Ribosomal protein S1-like RNA-binding domain XC_2218 SM00382 ATPases associated with a variety of cellular activities XC_2218 SM01086 C-terminal, D2-small domain, of ClpB protein XC_2223 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2226 SM00052 Putative diguanylate phosphodiesterase XC_2226 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_2226 SM00091 PAS domain XC_2226 SM00267 diguanylate cyclase XC_2227 SM00091 PAS domain XC_2227 SM00387 Histidine kinase-like ATPases XC_2228 SM00052 Putative diguanylate phosphodiesterase XC_2228 SM00267 diguanylate cyclase XC_2228 SM00448 cheY-homologous receiver domain XC_2229 SM00387 Histidine kinase-like ATPases XC_2232 SM00858 XC_2232 XC_2233 SM00260 Two component signalling adaptor domain XC_2233 SM00448 cheY-homologous receiver domain XC_2242 SM00047 Lysozyme subfamily 2 XC_2250 SM00421 helix_turn_helix, Lux Regulon XC_2250 SM00448 cheY-homologous receiver domain XC_2252 SM00448 cheY-homologous receiver domain XC_2253 SM00382 ATPases associated with a variety of cellular activities XC_2263 SM00382 ATPases associated with a variety of cellular activities XC_2274 SM00267 diguanylate cyclase XC_2275 SM00267 diguanylate cyclase XC_2276 SM00052 Putative diguanylate phosphodiesterase XC_2276 SM00267 diguanylate cyclase XC_2279 SM00382 ATPases associated with a variety of cellular activities XC_2279 SM00962 SRP54-type protein, GTPase domain XC_2282 SM00448 cheY-homologous receiver domain XC_2284 SM00073 Histidine Phosphotransfer domain XC_2284 SM00260 Two component signalling adaptor domain XC_2284 SM00387 Histidine kinase-like ATPases XC_2284 SM01231 XC_2284 XC_2300 SM00260 Two component signalling adaptor domain XC_2302 SM00448 cheY-homologous receiver domain XC_2303 SM00073 Histidine Phosphotransfer domain XC_2303 SM00260 Two component signalling adaptor domain XC_2303 SM00387 Histidine kinase-like ATPases XC_2303 SM01231 XC_2303 XC_2304 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2304 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2306 SM01049 XC_2306 XC_2307 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2307 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2308 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2308 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2309 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2309 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2311 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2313 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2313 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2314 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2314 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2316 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2318 SM00260 Two component signalling adaptor domain XC_2320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_2321 SM00138 Methyltransferase, chemotaxis proteins XC_2323 SM00448 cheY-homologous receiver domain XC_2324 SM00052 Putative diguanylate phosphodiesterase XC_2324 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_2324 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_2324 SM00091 PAS domain XC_2324 SM00267 diguanylate cyclase XC_2328 SM00966 SpoVT / AbrB like domain XC_2333 SM00073 Histidine Phosphotransfer domain XC_2333 SM00387 Histidine kinase-like ATPases XC_2333 SM00388 His Kinase A (phosphoacceptor) domain XC_2333 SM00448 cheY-homologous receiver domain XC_2335 SM00448 cheY-homologous receiver domain XC_2335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_2337 SM00937 XC_2337 XC_2338 SM00850 LytTr DNA-binding domain XC_2346 SM00851 MGS-like domain XC_2346 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XC_2348 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XC_2355 SM00899 XC_2355 XC_2359 SM00841 Elongation factor P, C-terminal XC_2359 SM01185 XC_2359 XC_2369 SM01007 Class II Aldolase and Adducin N-terminal domain XC_2384 SM00100 Cyclic nucleotide-monophosphate binding domain XC_2384 SM00419 helix_turn_helix, cAMP Regulatory protein XC_2396 SM00912 haemagglutination activity domain XC_2409 SM00382 ATPases associated with a variety of cellular activities XC_2428 SM00248 ankyrin repeats XC_2433 SM00382 ATPases associated with a variety of cellular activities XC_2435 SM00479 XC_2435 XC_2454 SM00014 Acid phosphatase homologues XC_2456 SM00387 Histidine kinase-like ATPases XC_2457 SM00448 cheY-homologous receiver domain XC_2459 SM00052 Putative diguanylate phosphodiesterase XC_2459 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_2459 SM00267 diguanylate cyclase XC_2472 SM00646 XC_2472 XC_2480 SM00758 XC_2480 XC_2488 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_2493 SM01130 XC_2493 XC_2497 SM00670 Large family of predicted nucleotide-binding domains XC_2504 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_2504 SM00091 PAS domain XC_2504 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_2507 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XC_2509 SM00382 ATPases associated with a variety of cellular activities XC_2518 SM00382 ATPases associated with a variety of cellular activities XC_2520 SM01103 XC_2520 XC_2522 SM00257 Lysin motif XC_2526 SM00463 Small MutS-related domain XC_2531 SM01192 XC_2531 XC_2531 SM01193 XC_2531 XC_2536 SM00387 Histidine kinase-like ATPases XC_2536 SM00433 TopoisomeraseII XC_2542 SM01091 Transporter associated domain XC_2547 SM00382 ATPases associated with a variety of cellular activities XC_2549 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_2575 SM00028 Tetratricopeptide repeats XC_2576 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_2576 SM00091 PAS domain XC_2576 SM00387 Histidine kinase-like ATPases XC_2576 SM00388 His Kinase A (phosphoacceptor) domain XC_2576 SM00448 cheY-homologous receiver domain XC_2577 SM00382 ATPases associated with a variety of cellular activities XC_2578 SM00448 cheY-homologous receiver domain XC_2579 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_2579 SM00091 PAS domain XC_2579 SM00387 Histidine kinase-like ATPases XC_2579 SM00388 His Kinase A (phosphoacceptor) domain XC_2579 SM00448 cheY-homologous receiver domain XC_2580 SM00477 DNA/RNA non-specific endonuclease XC_2580 SM00892 DNA/RNA non-specific endonuclease XC_2600 SM00966 SpoVT / AbrB like domain XC_2601 SM00857 Resolvase, N terminal domain XC_2631 SM00530 Helix-turn-helix XRE-family like proteins XC_2644 SM00830 Chorismate mutase type II XC_2648 SM00240 Forkhead associated domain XC_2652 SM00866 XC_2652 XC_2659 SM00564 beta-propeller repeat XC_2660 SM00434 DNA Topoisomerase IV XC_2664 SM00292 breast cancer carboxy-terminal domain XC_2664 SM00532 Ligase N family XC_2666 SM00771 ZipA, C-terminal domain (FtsZ-binding) XC_2678 SM00947 Carbonic anhydrase XC_2683 SM00479 XC_2683 XC_2689 SM00981 XC_2689 XC_2690 SM00382 ATPases associated with a variety of cellular activities XC_2695 SM00644 XC_2695 XC_2697 SM00450 Rhodanese Homology Domain XC_2702 SM00478 endonuclease III XC_2702 SM00525 XC_2702 XC_2704 SM00947 Carbonic anhydrase XC_2711 SM00382 ATPases associated with a variety of cellular activities XC_2714 SM00479 XC_2714 XC_2715 SM00267 diguanylate cyclase XC_2716 SM00967 RNA 2'-O ribose methyltransferase substrate binding XC_2718 SM00316 Ribosomal protein S1-like RNA-binding domain XC_2718 SM00357 Cold shock protein domain XC_2718 SM00955 XC_2718 XC_2723 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XC_2725 SM01018 B12 binding domain XC_2729 SM00354 helix_turn _helix lactose operon repressor XC_2733 SM00984 UDP binding domain XC_2736 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_2737 SM00382 ATPases associated with a variety of cellular activities XC_2743 SM01091 Transporter associated domain XC_2747 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_2749 SM00861 Transketolase, pyrimidine binding domain XC_2754 SM00382 ATPases associated with a variety of cellular activities XC_2762 SM00271 DnaJ molecular chaperone homology domain XC_2785 SM00487 DEAD-like helicases superfamily XC_2785 SM00490 helicase superfamily c-terminal domain XC_2793 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_2793 SM00267 diguanylate cyclase XC_2795 SM00267 diguanylate cyclase XC_2797 SM00822 XC_2797 XC_2816 SM00357 Cold shock protein domain XC_2819 SM00947 Carbonic anhydrase XC_2823 SM00382 ATPases associated with a variety of cellular activities XC_2827 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_2833 SM00631 XC_2833 XC_2834 SM01217 XC_2834 XC_2840 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_2841 SM00342 helix_turn_helix, arabinose operon control protein XC_2842 SM00434 DNA Topoisomerase IV XC_2847 SM00710 Parallel beta-helix repeats XC_2847 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XC_2848 SM01172 XC_2848 XC_2850 SM00671 Sel1-like repeats. XC_2855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_2857 SM00972 Spore Coat Protein U domain XC_2860 SM00972 Spore Coat Protein U domain XC_2866 SM00267 diguanylate cyclase XC_2872 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_2880 SM00481 DNA polymerase alpha chain like domain XC_2941 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XC_2942 SM00869 Autotransporter beta-domain XC_2946 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_2946 SM00267 diguanylate cyclase XC_2952 SM00487 DEAD-like helicases superfamily XC_2952 SM00490 helicase superfamily c-terminal domain XC_2955 SM00357 Cold shock protein domain XC_2962 SM01118 XC_2962 XC_2965 SM00448 cheY-homologous receiver domain XC_2968 SM00358 Double-stranded RNA binding motif XC_2968 SM00535 Ribonuclease III family XC_2971 SM00838 Elongation factor G C-terminus XC_2972 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_2982 SM00530 Helix-turn-helix XRE-family like proteins XC_2990 SM00812 Alpha-L-fucosidase XC_3006 SM00382 ATPases associated with a variety of cellular activities XC_3034 SM01126 XC_3034 XC_3035 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XC_3035 SM00534 ATPase domain of DNA mismatch repair MUTS family XC_3048 SM00382 ATPases associated with a variety of cellular activities XC_3048 SM00962 SRP54-type protein, GTPase domain XC_3048 SM00963 SRP54-type protein, helical bundle domain XC_3051 SM00813 Alpha-L-arabinofuranosidase C-terminus XC_3055 SM00448 cheY-homologous receiver domain XC_3056 SM00387 Histidine kinase-like ATPases XC_3056 SM00388 His Kinase A (phosphoacceptor) domain XC_3057 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_3057 SM00387 Histidine kinase-like ATPases XC_3057 SM00388 His Kinase A (phosphoacceptor) domain XC_3057 SM00448 cheY-homologous receiver domain XC_3058 SM00138 Methyltransferase, chemotaxis proteins XC_3060 SM00387 Histidine kinase-like ATPases XC_3060 SM00388 His Kinase A (phosphoacceptor) domain XC_3060 SM00448 cheY-homologous receiver domain XC_3067 SM00387 Histidine kinase-like ATPases XC_3067 SM00388 His Kinase A (phosphoacceptor) domain XC_3067 SM00448 cheY-homologous receiver domain XC_3068 SM00387 Histidine kinase-like ATPases XC_3068 SM00388 His Kinase A (phosphoacceptor) domain XC_3076 SM00342 helix_turn_helix, arabinose operon control protein XC_3077 SM00862 Transcriptional regulatory protein, C terminal XC_3079 SM00382 ATPases associated with a variety of cellular activities XC_3088 SM00904 Riboflavin kinase XC_3107 SM00244 prohibitin homologues XC_3112 SM00478 endonuclease III XC_3117 SM00421 helix_turn_helix, Lux Regulon XC_3117 SM00448 cheY-homologous receiver domain XC_3125 SM00387 Histidine kinase-like ATPases XC_3125 SM00388 His Kinase A (phosphoacceptor) domain XC_3126 SM00448 cheY-homologous receiver domain XC_3126 SM00862 Transcriptional regulatory protein, C terminal XC_3139 SM01060 XC_3139 XC_3141 SM00091 PAS domain XC_3141 SM00342 helix_turn_helix, arabinose operon control protein XC_3148 SM00481 DNA polymerase alpha chain like domain XC_3154 SM00974 XC_3154 XC_3157 SM01092 CO dehydrogenase flavoprotein C-terminal domain XC_3158 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_3159 SM01217 XC_3159 XC_3162 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_3163 SM00052 Putative diguanylate phosphodiesterase XC_3174 SM00855 Phosphoglycerate mutase family XC_3180 SM00487 DEAD-like helicases superfamily XC_3193 SM00788 Adenylosuccinate synthetase XC_3195 SM00244 prohibitin homologues XC_3196 SM00244 prohibitin homologues XC_3197 SM00448 cheY-homologous receiver domain XC_3198 SM00271 DnaJ molecular chaperone homology domain XC_3206 SM01321 XC_3206 XC_3207 SM01359 XC_3207 XC_3207 SM01360 XC_3207 XC_3216 SM00382 ATPases associated with a variety of cellular activities XC_3219 SM00910 XC_3219 XC_3225 SM00825 Beta-ketoacyl synthase XC_3227 SM00822 XC_3227 XC_3228 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XC_3237 SM00382 ATPases associated with a variety of cellular activities XC_3239 SM00460 Transglutaminase/protease-like homologues XC_3242 SM00493 XC_3242 XC_3244 SM00382 ATPases associated with a variety of cellular activities XC_3249 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_3250 SM00849 Metallo-beta-lactamase superfamily XC_3254 SM00331 Sigma factor PP2C-like phosphatases XC_3254 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XC_3255 SM00479 XC_3255 XC_3258 SM00849 Metallo-beta-lactamase superfamily XC_3259 SM00257 Lysin motif XC_3262 SM00411 bacterial (prokaryotic) histone like domain XC_3263 SM00382 ATPases associated with a variety of cellular activities XC_3263 SM00464 Found in ATP-dependent protease La (LON) XC_3264 SM00382 ATPases associated with a variety of cellular activities XC_3264 SM00994 ClpX C4-type zinc finger XC_3264 SM01086 C-terminal, D2-small domain, of ClpB protein XC_3268 SM01329 XC_3268 XC_3272 SM00448 cheY-homologous receiver domain XC_3272 SM00862 Transcriptional regulatory protein, C terminal XC_3273 SM00091 PAS domain XC_3273 SM00387 Histidine kinase-like ATPases XC_3273 SM00388 His Kinase A (phosphoacceptor) domain XC_3277 SM00014 Acid phosphatase homologues XC_3287 SM00855 Phosphoglycerate mutase family XC_3290 SM00829 Enoylreductase XC_3292 SM00382 ATPases associated with a variety of cellular activities XC_3298 SM00363 S4 RNA-binding domain XC_3301 SM00829 Enoylreductase XC_3309 SM00838 Elongation factor G C-terminus XC_3316 SM00662 RNA polymerases D XC_3317 SM00363 S4 RNA-binding domain XC_3317 SM01390 XC_3317 XC_3329 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XC_3330 SM01374 XC_3330 XC_3334 SM00322 K homology RNA-binding domain XC_3337 SM01382 XC_3337 XC_3337 SM01383 XC_3337 XC_3341 SM01403 XC_3341 XC_3343 SM00838 Elongation factor G C-terminus XC_3343 SM00889 Elongation factor G, domain IV XC_3346 SM00663 RNA polymerase I subunit A N-terminus XC_3351 SM00649 Ribosomal protein L11/L12 XC_3352 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XC_3352 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XC_3358 SM01400 XC_3358 XC_3361 SM00028 Tetratricopeptide repeats XC_3363 SM00937 XC_3363 XC_3364 SM00028 Tetratricopeptide repeats XC_3365 SM00852 Probable molybdopterin binding domain XC_3391 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XC_3391 SM00475 5'-3' exonuclease XC_3404 SM00421 helix_turn_helix, Lux Regulon XC_3405 SM00387 Histidine kinase-like ATPases XC_3405 SM00388 His Kinase A (phosphoacceptor) domain XC_3405 SM00448 cheY-homologous receiver domain XC_3406 SM00448 cheY-homologous receiver domain XC_3410 SM00342 helix_turn_helix, arabinose operon control protein XC_3419 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_3428 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_3428 SM00895 XC_3428 XC_3440 SM00650 Ribosomal RNA adenine dimethylases XC_3451 SM00387 Histidine kinase-like ATPases XC_3451 SM00388 His Kinase A (phosphoacceptor) domain XC_3452 SM00448 cheY-homologous receiver domain XC_3452 SM00862 Transcriptional regulatory protein, C terminal XC_3454 SM00382 ATPases associated with a variety of cellular activities XC_3458 SM00382 ATPases associated with a variety of cellular activities XC_3482 SM00996 S-adenosyl-L-homocysteine hydrolase XC_3482 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XC_3487 SM00642 Alpha-amylase domain XC_3493 SM00829 Enoylreductase XC_3501 SM00957 SecA DEAD-like domain XC_3501 SM00958 SecA preprotein cross-linking domain XC_3505 SM00864 Tubulin/FtsZ family, GTPase domain XC_3505 SM00865 Tubulin/FtsZ family, C-terminal domain XC_3506 SM00842 Cell division protein FtsA XC_3528 SM00448 cheY-homologous receiver domain XC_3528 SM00862 Transcriptional regulatory protein, C terminal XC_3529 SM00387 Histidine kinase-like ATPases XC_3529 SM00388 His Kinase A (phosphoacceptor) domain XC_3534 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XC_3546 SM00382 ATPases associated with a variety of cellular activities XC_3561 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_3561 SM00866 XC_3561 XC_3573 SM00382 ATPases associated with a variety of cellular activities XC_3578 SM01211 XC_3578 XC_3590 SM00656 XC_3590 XC_3591 SM00656 XC_3591 XC_3597 SM00528 Domain in histone-like proteins of HNS family XC_3600 SM00382 ATPases associated with a variety of cellular activities XC_3606 SM00882 Coenzyme A transferase XC_3607 SM00882 Coenzyme A transferase XC_3614 SM00893 Electron transfer flavoprotein domain XC_3615 SM00893 Electron transfer flavoprotein domain XC_3632 SM00382 ATPases associated with a variety of cellular activities XC_3636 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_3643 SM00487 DEAD-like helicases superfamily XC_3643 SM00490 helicase superfamily c-terminal domain XC_3647 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_3652 SM00825 Beta-ketoacyl synthase XC_3665 SM00382 ATPases associated with a variety of cellular activities XC_3669 SM00382 ATPases associated with a variety of cellular activities XC_3669 SM00448 cheY-homologous receiver domain XC_3673 SM00710 Parallel beta-helix repeats XC_3676 SM00830 Chorismate mutase type II XC_3678 SM00382 ATPases associated with a variety of cellular activities XC_3693 SM00986 Uracil DNA glycosylase superfamily XC_3693 SM00987 UreE urease accessory protein, C-terminal domain XC_3701 SM00382 ATPases associated with a variety of cellular activities XC_3701 SM00930 XC_3701 XC_3714 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_3714 SM00091 PAS domain XC_3714 SM00387 Histidine kinase-like ATPases XC_3714 SM00388 His Kinase A (phosphoacceptor) domain XC_3714 SM00448 cheY-homologous receiver domain XC_3718 SM01005 Alanine racemase, C-terminal domain XC_3720 SM00344 helix_turn_helix ASNC type XC_3731 SM00382 ATPases associated with a variety of cellular activities XC_3734 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XC_3735 SM00986 Uracil DNA glycosylase superfamily XC_3735 SM00987 UreE urease accessory protein, C-terminal domain XC_3736 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_3747 SM00448 cheY-homologous receiver domain XC_3747 SM00850 LytTr DNA-binding domain XC_3748 SM00387 Histidine kinase-like ATPases XC_3757 SM00091 PAS domain XC_3757 SM00138 Methyltransferase, chemotaxis proteins XC_3757 SM00911 HWE histidine kinase XC_3758 SM00448 cheY-homologous receiver domain XC_3760 SM00382 ATPases associated with a variety of cellular activities XC_3760 SM00448 cheY-homologous receiver domain XC_3771 SM00382 ATPases associated with a variety of cellular activities XC_3780 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_3788 SM00382 ATPases associated with a variety of cellular activities XC_3789 SM00631 XC_3789 XC_3792 SM00822 XC_3792 XC_3800 SM00267 diguanylate cyclase XC_3801 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_3820 SM00257 Lysin motif XC_3825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XC_3825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XC_3825 SM00493 XC_3825 XC_3829 SM00091 PAS domain XC_3829 SM00267 diguanylate cyclase XC_3836 SM00487 DEAD-like helicases superfamily XC_3836 SM00490 helicase superfamily c-terminal domain XC_3844 SM00986 Uracil DNA glycosylase superfamily XC_3844 SM00987 UreE urease accessory protein, C-terminal domain XC_3845 SM00448 cheY-homologous receiver domain XC_3847 SM00382 ATPases associated with a variety of cellular activities XC_3848 SM00487 DEAD-like helicases superfamily XC_3848 SM00490 helicase superfamily c-terminal domain XC_3850 SM00357 Cold shock protein domain XC_3850 SM00382 ATPases associated with a variety of cellular activities XC_3850 SM00959 Rho termination factor, N-terminal domain XC_3856 SM00257 Lysin motif XC_3865 SM01150 XC_3865 XC_3877 SM00644 XC_3877 XC_3879 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_3886 SM01217 XC_3886 XC_3887 SM00905 Dihydroneopterin aldolase XC_3892 SM00400 zinc finger XC_3892 SM00493 XC_3892 XC_3892 SM00766 DNA primase DnaG DnaB-binding XC_3925 SM00363 S4 RNA-binding domain XC_3934 SM00470 ParB-like nuclease domain XC_3939 SM01259 XC_3939 XC_3945 SM00836 DALR anticodon binding domain XC_3945 SM01016 Arginyl tRNA synthetase N terminal dom XC_3952 SM00823 Phosphopantetheine attachment site XC_3952 SM00824 Thioesterase XC_3957 SM00938 Nitrogen regulatory protein P-II XC_3959 SM00382 ATPases associated with a variety of cellular activities XC_3962 SM00052 Putative diguanylate phosphodiesterase XC_3967 SM00986 Uracil DNA glycosylase superfamily XC_3967 SM00987 UreE urease accessory protein, C-terminal domain XC_3969 SM00244 prohibitin homologues XC_3981 SM00448 cheY-homologous receiver domain XC_3981 SM00862 Transcriptional regulatory protein, C terminal XC_3982 SM00387 Histidine kinase-like ATPases XC_3982 SM00388 His Kinase A (phosphoacceptor) domain XC_3986 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_3993 SM01060 XC_3993 XC_3997 SM00421 helix_turn_helix, Lux Regulon XC_3997 SM00448 cheY-homologous receiver domain XC_4000 SM00382 ATPases associated with a variety of cellular activities XC_4010 SM00849 Metallo-beta-lactamase superfamily XC_4016 SM00960 Roadblock/LC7 domain XC_4021 SM00342 helix_turn_helix, arabinose operon control protein XC_4030 SM00387 Histidine kinase-like ATPases XC_4030 SM00388 His Kinase A (phosphoacceptor) domain XC_4031 SM00448 cheY-homologous receiver domain XC_4031 SM00862 Transcriptional regulatory protein, C terminal XC_4036 SM00248 ankyrin repeats XC_4037 SM01060 XC_4037 XC_4038 SM00491 XC_4038 XC_4045 SM01004 Delta-aminolevulinic acid dehydratase XC_4055 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_4059 SM00382 ATPases associated with a variety of cellular activities XC_4061 SM00530 Helix-turn-helix XRE-family like proteins XC_4066 SM00382 ATPases associated with a variety of cellular activities XC_4078 SM00881 CoA binding domain XC_4079 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_4079 SM00924 MgtE intracellular N domain XC_4080 SM01057 Eukaryotic-type carbonic anhydrase XC_4085 SM00248 ankyrin repeats XC_4087 SM00825 Beta-ketoacyl synthase XC_4092 SM00822 XC_4092 XC_4099 SM00563 Phosphate acyltransferases XC_4109 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XC_4109 SM00474 3'-5' exonuclease XC_4109 SM00475 5'-3' exonuclease XC_4109 SM00482 DNA polymerase A domain XC_4114 SM01266 XC_4114 XC_4117 SM00155 Phospholipase D. Active site motifs. XC_4138 SM00248 ankyrin repeats XC_4139 SM00248 ankyrin repeats XC_4150 SM00421 helix_turn_helix, Lux Regulon XC_4150 SM00448 cheY-homologous receiver domain XC_4159 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_4162 SM00346 helix_turn_helix isocitrate lyase regulation XC_4163 SM00342 helix_turn_helix, arabinose operon control protein XC_4167 SM00091 PAS domain XC_4167 SM00387 Histidine kinase-like ATPases XC_4167 SM00388 His Kinase A (phosphoacceptor) domain XC_4167 SM00448 cheY-homologous receiver domain XC_4171 SM00564 beta-propeller repeat XC_4177 SM00836 DALR anticodon binding domain XC_4179 SM00382 ATPases associated with a variety of cellular activities XC_4192 SM00354 helix_turn _helix lactose operon repressor XC_4195 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_4197 SM00758 XC_4197 XC_4197 SM01217 XC_4197 XC_4204 SM00612 XC_4204 XC_4207 SM00633 Glycosyl hydrolase family 10 XC_4210 SM00633 Glycosyl hydrolase family 10 XC_4219 SM00829 Enoylreductase XC_4220 SM00563 Phosphate acyltransferases XC_4222 SM00354 helix_turn _helix lactose operon repressor XC_4226 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XC_4236 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_4236 SM00388 His Kinase A (phosphoacceptor) domain XC_4239 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_4239 SM01232 XC_4239 XC_4241 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_4241 SM00091 PAS domain XC_4254 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_4263 SM00155 Phospholipase D. Active site motifs. XC_4273 SM00369 Leucine-rich repeats, typical (most populated) subfamily XC_4277 SM00530 Helix-turn-helix XRE-family like proteins XC_4286 SM00530 Helix-turn-helix XRE-family like proteins XC_4290 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XC_4290 SM00736 Dystroglycan-type cadherin-like domains. XC_4290 SM00869 Autotransporter beta-domain XC_4296 SM00382 ATPases associated with a variety of cellular activities XC_4305 SM00829 Enoylreductase XC_4313 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_4313 SM00091 PAS domain XC_4313 SM00267 diguanylate cyclase XC_4326 SM00014 Acid phosphatase homologues XC_4329 SM00028 Tetratricopeptide repeats