locus-tag class description JH290_00005 PF00308 Bacterial dnaA protein JH290_00005 PF08299 Bacterial dnaA protein helix-turn-helix JH290_00005 PF11638 DnaA N-terminal domain JH290_00010 PF00468 Ribosomal protein L34 JH290_00015 PF00825 Ribonuclease P JH290_00020 PF02096 60Kd inner membrane protein JH290_00020 PF14849 YidC periplasmic domain JH290_00025 PF01522 Polysaccharide deacetylase JH290_00030 PF01926 50S ribosome-binding GTPase JH290_00030 PF12631 MnmE helical domain JH290_00030 PF10396 GTP-binding protein TrmE N-terminus JH290_00035 PF00593 TonB dependent receptor JH290_00040 PF01569 PAP2 superfamily JH290_00050 PF03009 Glycerophosphoryl diester phosphodiesterase family JH290_00055 PF01694 Rhomboid family JH290_00060 PF03741 Integral membrane protein TerC family JH290_00065 PF10672 S-adenosylmethionine-dependent methyltransferase JH290_00065 PF17785 PUA-like domain JH290_00090 PF07690 Major Facilitator Superfamily JH290_00095 PF02595 Glycerate kinase family JH290_00100 PF05651 Putative sugar diacid recognition JH290_00100 PF17853 GGDEF-like domain JH290_00100 PF13556 PucR C-terminal helix-turn-helix domain JH290_00105 PF00990 Diguanylate cyclase, GGDEF domain JH290_00110 PF10947 Protein of unknown function (DUF2628) JH290_00115 PF07715 TonB-dependent Receptor Plug Domain JH290_00115 PF00593 TonB dependent receptor JH290_00125 PF13520 Amino acid permease JH290_00140 PF03466 LysR substrate binding domain JH290_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_00145 PF08240 Alcohol dehydrogenase GroES-like domain JH290_00145 PF00107 Zinc-binding dehydrogenase JH290_00155 PF02646 RmuC family JH290_00165 PF00255 Glutathione peroxidase JH290_00175 PF04333 MlaA lipoprotein JH290_00185 PF05494 MlaC protein JH290_00190 PF02470 MlaD protein JH290_00195 PF02405 Permease MlaE JH290_00200 PF00005 ABC transporter JH290_00205 PF17946 RecC C-terminal domain JH290_00210 PF00580 UvrD/REP helicase N-terminal domain JH290_00210 PF12705 PD-(D/E)XK nuclease superfamily JH290_00210 PF13361 UvrD-like helicase C-terminal domain JH290_00215 PF13538 UvrD-like helicase C-terminal domain JH290_00220 PF01381 Helix-turn-helix JH290_00275 PF00849 RNA pseudouridylate synthase JH290_00315 PF01850 PIN domain JH290_00335 PF13396 Phospholipase_D-nuclease N-terminal JH290_00335 PF13091 PLD-like domain JH290_00355 PF00083 Sugar (and other) transporter JH290_00360 PF04632 Fusaric acid resistance protein family JH290_00365 PF02321 Outer membrane efflux protein JH290_00370 PF00529 HlyD membrane-fusion protein of T1SS JH290_00370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_00375 PF07869 Protein of unknown function (DUF1656) JH290_00385 PF01227 GTP cyclohydrolase I JH290_00410 PF01925 Sulfite exporter TauE/SafE JH290_00420 PF02810 SEC-C motif JH290_00430 PF01263 Aldose 1-epimerase JH290_00435 PF07690 Major Facilitator Superfamily JH290_00440 PF01126 Heme oxygenase JH290_00445 PF00360 Phytochrome region JH290_00445 PF13426 PAS domain JH290_00445 PF08446 PAS fold JH290_00445 PF01590 GAF domain JH290_00455 PF03594 Benzoate membrane transport protein JH290_00485 PF06827 Zinc finger found in FPG and IleRS JH290_00485 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JH290_00485 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JH290_00505 PF04349 Periplasmic glucan biosynthesis protein, MdoG JH290_00510 PF00512 His Kinase A (phospho-acceptor) domain JH290_00510 PF08446 PAS fold JH290_00510 PF00360 Phytochrome region JH290_00510 PF01590 GAF domain JH290_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_00515 PF00265 Thymidine kinase JH290_00520 PF00580 UvrD/REP helicase N-terminal domain JH290_00520 PF13361 UvrD-like helicase C-terminal domain JH290_00525 PF13302 Acetyltransferase (GNAT) domain JH290_00535 PF04337 Protein of unknown function, DUF480 JH290_00540 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JH290_00545 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JH290_00550 PF04820 Tryptophan halogenase JH290_00565 PF00356 Bacterial regulatory proteins, lacI family JH290_00575 PF01553 Acyltransferase JH290_00580 PF00550 Phosphopantetheine attachment site JH290_00580 PF08659 KR domain JH290_00580 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_00580 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_00580 PF16197 Ketoacyl-synthetase C-terminal extension JH290_00580 PF08240 Alcohol dehydrogenase GroES-like domain JH290_00580 PF00698 Acyl transferase domain JH290_00580 PF14765 Polyketide synthase dehydratase JH290_00630 PF04616 Glycosyl hydrolases family 43 JH290_00650 PF00331 Glycosyl hydrolase family 10 JH290_00650 PF03422 Carbohydrate binding module (family 6) JH290_00650 PF00553 Cellulose binding domain JH290_00655 PF02614 Glucuronate isomerase JH290_00660 PF00703 Glycosyl hydrolases family 2 JH290_00660 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JH290_00660 PF16355 Domain of unknown function (DUF4982) JH290_00660 PF02837 Glycosyl hydrolases family 2, sugar binding domain JH290_00660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JH290_00685 PF08450 SMP-30/Gluconolactonase/LRE-like region JH290_00725 PF08125 Mannitol dehydrogenase C-terminal domain JH290_00725 PF01232 Mannitol dehydrogenase Rossmann domain JH290_00730 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_00730 PF14310 Fibronectin type III-like domain JH290_00730 PF07691 PA14 domain JH290_00730 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_00735 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JH290_00735 PF04616 Glycosyl hydrolases family 43 JH290_00740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JH290_00740 PF13378 Enolase C-terminal domain-like JH290_00750 PF03648 Glycosyl hydrolase family 67 N-terminus JH290_00750 PF07488 Glycosyl hydrolase family 67 middle domain JH290_00750 PF07477 Glycosyl hydrolase family 67 C-terminus JH290_00755 PF00356 Bacterial regulatory proteins, lacI family JH290_00765 PF01171 PP-loop family JH290_00770 PF04381 Putative exonuclease, RdgC JH290_00780 PF12697 Alpha/beta hydrolase family JH290_00785 PF00762 Ferrochelatase JH290_00795 PF02416 mttA/Hcf106 family JH290_00800 PF02416 mttA/Hcf106 family JH290_00805 PF00902 Sec-independent protein translocase protein (TatC) JH290_00815 PF00117 Glutamine amidotransferase class-I JH290_00815 PF00958 GMP synthase C terminal domain JH290_00820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JH290_00820 PF00437 Type II/IV secretion system protein JH290_00825 PF02091 Glycyl-tRNA synthetase alpha subunit JH290_00830 PF02092 Glycyl-tRNA synthetase beta subunit JH290_00830 PF05746 DALR anticodon binding domain JH290_00835 PF17243 POTRA domain TamA domain 1 JH290_00835 PF01103 Surface antigen JH290_00840 PF04357 TamB, inner membrane protein subunit of TAM complex JH290_00860 PF01011 PQQ enzyme repeat JH290_00860 PF13360 PQQ-like domain JH290_00860 PF13570 PQQ-like domain JH290_00875 PF06165 Glycosyltransferase family 36 JH290_00875 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JH290_00880 PF00072 Response regulator receiver domain JH290_00880 PF09456 RcsC Alpha-Beta-Loop (ABL) JH290_00880 PF00512 His Kinase A (phospho-acceptor) domain JH290_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_00885 PF02659 Putative manganese efflux pump JH290_00900 PF01614 Bacterial transcriptional regulator JH290_00900 PF09339 IclR helix-turn-helix domain JH290_00905 PF07690 Major Facilitator Superfamily JH290_00910 PF05336 L-rhamnose mutarotase JH290_00915 PF13378 Enolase C-terminal domain-like JH290_00915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JH290_00925 PF01557 Fumarylacetoacetate (FAA) hydrolase family JH290_00940 PF00248 Aldo/keto reductase family JH290_00945 PF04616 Glycosyl hydrolases family 43 JH290_00945 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JH290_00965 PF00196 Bacterial regulatory proteins, luxR family JH290_00965 PF00072 Response regulator receiver domain JH290_00970 PF16177 Acetyl-coenzyme A synthetase N-terminus JH290_00970 PF00501 AMP-binding enzyme JH290_00970 PF13193 AMP-binding enzyme C-terminal domain JH290_00980 PF04341 Protein of unknown function, DUF485 JH290_00985 PF00474 Sodium:solute symporter family JH290_00995 PF00639 PPIC-type PPIASE domain JH290_01005 PF00480 ROK family JH290_01060 PF04226 Transglycosylase associated protein JH290_01065 PF01648 4'-phosphopantetheinyl transferase superfamily JH290_01070 PF09423 PhoD-like phosphatase JH290_01070 PF16655 PhoD-like phosphatase, N-terminal domain JH290_01075 PF02527 rRNA small subunit methyltransferase G JH290_01095 PF00529 HlyD membrane-fusion protein of T1SS JH290_01095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_01105 PF00873 AcrB/AcrD/AcrF family JH290_01115 PF00830 Ribosomal L28 family JH290_01120 PF00471 Ribosomal protein L33 JH290_01125 PF04909 Amidohydrolase JH290_01130 PF04303 PrpF protein JH290_01135 PF03737 Aldolase/RraA JH290_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_01140 PF03466 LysR substrate binding domain JH290_01145 PF13091 PLD-like domain JH290_01145 PF13396 Phospholipase_D-nuclease N-terminal JH290_01155 PF00580 UvrD/REP helicase N-terminal domain JH290_01155 PF13361 UvrD-like helicase C-terminal domain JH290_01165 PF14602 Hexapeptide repeat of succinyl-transferase JH290_01165 PF12464 Maltose acetyltransferase JH290_01185 PF01367 5'-3' exonuclease, C-terminal SAM fold JH290_01185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JH290_01185 PF00476 DNA polymerase family A JH290_01185 PF01612 3'-5' exonuclease JH290_01190 PF01218 Coproporphyrinogen III oxidase JH290_01225 PF05114 Protein of unknown function (DUF692) JH290_01240 PF00005 ABC transporter JH290_01290 PF04820 Tryptophan halogenase JH290_01295 PF00550 Phosphopantetheine attachment site JH290_01310 PF07977 FabA-like domain JH290_01355 PF04820 Tryptophan halogenase JH290_01360 PF00535 Glycosyl transferase family 2 JH290_01370 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_01370 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_01375 PF05166 YcgL domain JH290_01385 PF01451 Low molecular weight phosphotyrosine protein phosphatase JH290_01390 PF00723 Glycosyl hydrolases family 15 JH290_01395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JH290_01395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JH290_01400 PF00999 Sodium/hydrogen exchanger family JH290_01400 PF02254 TrkA-N domain JH290_01405 PF00194 Eukaryotic-type carbonic anhydrase JH290_01410 PF01769 Divalent cation transporter JH290_01410 PF03448 MgtE intracellular N domain JH290_01410 PF00571 CBS domain JH290_01420 PF00583 Acetyltransferase (GNAT) family JH290_01420 PF13380 CoA binding domain JH290_01420 PF13607 Succinyl-CoA ligase like flavodoxin domain JH290_01430 PF03477 ATP cone domain JH290_01430 PF02867 Ribonucleotide reductase, barrel domain JH290_01430 PF00317 Ribonucleotide reductase, all-alpha domain JH290_01435 PF00268 Ribonucleotide reductase, small chain JH290_01460 PF03061 Thioesterase superfamily JH290_01475 PF02558 Ketopantoate reductase PanE/ApbA JH290_01475 PF08546 Ketopantoate reductase PanE/ApbA C terminal JH290_01485 PF01061 ABC-2 type transporter JH290_01490 PF00005 ABC transporter JH290_01495 PF00175 Oxidoreductase NAD-binding domain JH290_01495 PF01383 CpcD/allophycocyanin linker domain JH290_01500 PF01229 Glycosyl hydrolases family 39 JH290_01505 PF01545 Cation efflux family JH290_01510 PF02583 Metal-sensitive transcriptional repressor JH290_01520 PF01381 Helix-turn-helix JH290_01530 PF00005 ABC transporter JH290_01550 PF04820 Tryptophan halogenase JH290_01570 PF02798 Glutathione S-transferase, N-terminal domain JH290_01570 PF00043 Glutathione S-transferase, C-terminal domain JH290_01575 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JH290_01575 PF00326 Prolyl oligopeptidase family JH290_01600 PF00490 Delta-aminolevulinic acid dehydratase JH290_01605 PF00258 Flavodoxin JH290_01605 PF00175 Oxidoreductase NAD-binding domain JH290_01605 PF00667 FAD binding domain JH290_01615 PF08501 Shikimate dehydrogenase substrate binding domain JH290_01615 PF01488 Shikimate / quinate 5-dehydrogenase JH290_01615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JH290_01630 PF13307 Helicase C-terminal domain JH290_01630 PF06733 DEAD_2 JH290_01640 PF06628 Catalase-related immune-responsive JH290_01640 PF00199 Catalase JH290_01665 PF01207 Dihydrouridine synthase (Dus) JH290_01675 PF00486 Transcriptional regulatory protein, C terminal JH290_01675 PF00072 Response regulator receiver domain JH290_01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_01695 PF06167 Glucose-regulated metallo-peptidase M90 JH290_01705 PF03099 Biotin/lipoate A/B protein ligase family JH290_01705 PF08279 HTH domain JH290_01705 PF02237 Biotin protein ligase C terminal domain JH290_01710 PF03309 Type III pantothenate kinase JH290_01740 PF02223 Thymidylate kinase JH290_01765 PF00491 Arginase family JH290_01780 PF05532 CsbD-like JH290_01785 PF00579 tRNA synthetases class I (W and Y) JH290_01790 PF00753 Metallo-beta-lactamase superfamily JH290_01805 PF00892 EamA-like transporter family JH290_01810 PF00892 EamA-like transporter family JH290_01830 PF00005 ABC transporter JH290_01840 PF13533 Biotin-lipoyl like JH290_01845 PF07730 Histidine kinase JH290_01850 PF00196 Bacterial regulatory proteins, luxR family JH290_01850 PF00072 Response regulator receiver domain JH290_01880 PF00883 Cytosol aminopeptidase family, catalytic domain JH290_01880 PF02789 Cytosol aminopeptidase family, N-terminal domain JH290_01885 PF13419 Haloacid dehalogenase-like hydrolase JH290_01890 PF01594 AI-2E family transporter JH290_01910 PF00595 PDZ domain JH290_01930 PF08521 Two-component sensor kinase N-terminal JH290_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_01930 PF00512 His Kinase A (phospho-acceptor) domain JH290_01935 PF00072 Response regulator receiver domain JH290_01935 PF00486 Transcriptional regulatory protein, C terminal JH290_01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_01945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH290_01950 PF08338 Domain of unknown function (DUF1731) JH290_01950 PF01370 NAD dependent epimerase/dehydratase family JH290_01995 PF01139 tRNA-splicing ligase RtcB JH290_02010 PF00440 Bacterial regulatory proteins, tetR family JH290_02015 PF00111 2Fe-2S iron-sulfur cluster binding domain JH290_02015 PF00175 Oxidoreductase NAD-binding domain JH290_02015 PF00970 Oxidoreductase FAD-binding domain JH290_02020 PF00487 Fatty acid desaturase JH290_02030 PF00563 EAL domain JH290_02030 PF12792 CSS motif domain associated with EAL JH290_02045 PF01078 Magnesium chelatase, subunit ChlI JH290_02045 PF13335 Magnesium chelatase, subunit ChlI C-terminal JH290_02050 PF04380 Membrane fusogenic activity JH290_02055 PF00543 Nitrogen regulatory protein P-II JH290_02070 PF17284 Spermidine synthase tetramerisation domain JH290_02075 PF17810 Arginine decarboxylase helical bundle domain JH290_02075 PF17944 Arginine decarboxylase C-terminal helical extension JH290_02075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JH290_02085 PF13193 AMP-binding enzyme C-terminal domain JH290_02085 PF00668 Condensation domain JH290_02085 PF00550 Phosphopantetheine attachment site JH290_02085 PF00501 AMP-binding enzyme JH290_02085 PF00975 Thioesterase domain JH290_02090 PF03033 Glycosyltransferase family 28 N-terminal domain JH290_02095 PF01757 Acyltransferase family JH290_02100 PF00106 short chain dehydrogenase JH290_02115 PF00750 tRNA synthetases class I (R) JH290_02115 PF03485 Arginyl tRNA synthetase N terminal domain JH290_02115 PF05746 DALR anticodon binding domain JH290_02120 PF04002 RadC-like JAB domain JH290_02125 PF04127 DNA / pantothenate metabolism flavoprotein JH290_02125 PF02441 Flavoprotein JH290_02130 PF00692 dUTPase JH290_02135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JH290_02135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JH290_02135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JH290_02135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JH290_02150 PF00535 Glycosyl transferase family 2 JH290_02155 PF01370 NAD dependent epimerase/dehydratase family JH290_02170 PF02195 ParB-like nuclease domain JH290_02170 PF17762 HTH domain found in ParB protein JH290_02175 PF13614 AAA domain JH290_02185 PF00156 Phosphoribosyl transferase domain JH290_02190 PF03372 Endonuclease/Exonuclease/phosphatase family JH290_02195 PF07690 Major Facilitator Superfamily JH290_02205 PF03702 Anhydro-N-acetylmuramic acid kinase JH290_02210 PF04225 Opacity-associated protein A LysM-like domain JH290_02210 PF01551 Peptidase family M23 JH290_02215 PF00579 tRNA synthetases class I (W and Y) JH290_02245 PF00171 Aldehyde dehydrogenase family JH290_02245 PF01619 Proline dehydrogenase JH290_02245 PF14850 DNA-binding domain of Proline dehydrogenase JH290_02245 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JH290_02255 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JH290_02255 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JH290_02260 PF00115 Cytochrome C and Quinol oxidase polypeptide I JH290_02270 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JH290_02275 PF00510 Cytochrome c oxidase subunit III JH290_02300 PF01040 UbiA prenyltransferase family JH290_02305 PF02683 Cytochrome C biogenesis protein transmembrane region JH290_02305 PF11412 Disulphide bond corrector protein DsbC JH290_02310 PF13593 SBF-like CPA transporter family (DUF4137) JH290_02320 PF08278 DNA primase DnaG DnaB-binding JH290_02320 PF08275 DNA primase catalytic core, N-terminal domain JH290_02320 PF01807 CHC2 zinc finger JH290_02320 PF10410 DnaB-helicase binding domain of primase JH290_02325 PF03631 Virulence factor BrkB JH290_02330 PF09424 Yqey-like protein JH290_02335 PF01165 Ribosomal protein S21 JH290_02340 PF00814 Glycoprotease family JH290_02345 PF02152 Dihydroneopterin aldolase JH290_02350 PF14310 Fibronectin type III-like domain JH290_02350 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_02350 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_02355 PF07995 Glucose / Sorbosone dehydrogenase JH290_02360 PF05360 yiaA/B two helix domain JH290_02375 PF13520 Amino acid permease JH290_02385 PF13378 Enolase C-terminal domain-like JH290_02385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JH290_02395 PF01510 N-acetylmuramoyl-L-alanine amidase JH290_02410 PF01471 Putative peptidoglycan binding domain JH290_02410 PF04717 Type VI secretion system, phage-baseplate injector JH290_02415 PF01427 D-ala-D-ala dipeptidase JH290_02455 PF07063 Domain of unknown function (DUF1338) JH290_02460 PF04542 Sigma-70 region 2 JH290_02460 PF08281 Sigma-70, region 4 JH290_02480 PF00873 AcrB/AcrD/AcrF family JH290_02485 PF00873 AcrB/AcrD/AcrF family JH290_02490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_02495 PF01546 Peptidase family M20/M25/M40 JH290_02495 PF07687 Peptidase dimerisation domain JH290_02500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JH290_02500 PF14489 QueF-like protein JH290_02505 PF01476 LysM domain JH290_02505 PF00756 Putative esterase JH290_02515 PF03971 Monomeric isocitrate dehydrogenase JH290_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_02525 PF03466 LysR substrate binding domain JH290_02530 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JH290_02540 PF07498 Rho termination factor, N-terminal domain JH290_02540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH290_02540 PF07497 Rho termination factor, RNA-binding domain JH290_02545 PF00085 Thioredoxin JH290_02550 PF00270 DEAD/DEAH box helicase JH290_02550 PF00271 Helicase conserved C-terminal domain JH290_02550 PF12300 ATP-dependent RNA helicase RhlB JH290_02555 PF00005 ABC transporter JH290_02560 PF18075 FtsX extracellular domain JH290_02565 PF01339 CheB methylesterase JH290_02565 PF00072 Response regulator receiver domain JH290_02570 PF03167 Uracil DNA glycosylase superfamily JH290_02575 PF04545 Sigma-70, region 4 JH290_02575 PF04542 Sigma-70 region 2 JH290_02580 PF03458 UPF0126 domain JH290_02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_02600 PF00043 Glutathione S-transferase, C-terminal domain JH290_02600 PF13417 Glutathione S-transferase, N-terminal domain JH290_02605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JH290_02605 PF18074 Primosomal protein N C-terminal domain JH290_02605 PF17764 3′ DNA-binding domain (3′BD) JH290_02605 PF00271 Helicase conserved C-terminal domain JH290_02605 PF00270 DEAD/DEAH box helicase JH290_02620 PF01554 MatE JH290_02625 PF01343 Peptidase family S49 JH290_02640 PF01590 GAF domain JH290_02640 PF00990 Diguanylate cyclase, GGDEF domain JH290_02640 PF00360 Phytochrome region JH290_02640 PF00563 EAL domain JH290_02655 PF01300 Telomere recombination JH290_02660 PF01751 Toprim domain JH290_02660 PF01131 DNA topoisomerase JH290_02660 PF13368 Topoisomerase C-terminal repeat JH290_02670 PF07963 Prokaryotic N-terminal methylation motif JH290_02670 PF00114 Pilin (bacterial filament) JH290_02675 PF04361 Protein of unknown function (DUF494) JH290_02680 PF02481 DNA recombination-mediator protein A JH290_02680 PF17782 DprA winged helix domain JH290_02685 PF01476 LysM domain JH290_02690 PF01327 Polypeptide deformylase JH290_02695 PF00551 Formyl transferase JH290_02695 PF02911 Formyl transferase, C-terminal domain JH290_02700 PF01029 NusB family JH290_02700 PF01189 16S rRNA methyltransferase RsmB/F JH290_02715 PF00535 Glycosyl transferase family 2 JH290_02735 PF00925 GTP cyclohydrolase II JH290_02745 PF03279 Bacterial lipid A biosynthesis acyltransferase JH290_02750 PF02580 D-Tyr-tRNA(Tyr) deacylase JH290_02755 PF04546 Sigma-70, non-essential region JH290_02755 PF03979 Sigma-70 factor, region 1.1 JH290_02755 PF04542 Sigma-70 region 2 JH290_02755 PF04539 Sigma-70 region 3 JH290_02755 PF04545 Sigma-70, region 4 JH290_02755 PF00140 Sigma-70 factor, region 1.2 JH290_02770 PF00589 Phage integrase family JH290_02775 PF05598 Transposase domain (DUF772) JH290_02775 PF01609 Transposase DDE domain JH290_02790 PF07996 Type IV secretion system proteins JH290_02805 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JH290_02815 PF01527 Transposase JH290_02830 PF13614 AAA domain JH290_02850 PF03377 TAL effector repeat JH290_02900 PF00360 Phytochrome region JH290_02900 PF01590 GAF domain JH290_02900 PF00563 EAL domain JH290_02900 PF00990 Diguanylate cyclase, GGDEF domain JH290_02920 PF03466 LysR substrate binding domain JH290_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_02925 PF00248 Aldo/keto reductase family JH290_02945 PF01042 Endoribonuclease L-PSP JH290_02950 PF03466 LysR substrate binding domain JH290_02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_02960 PF00005 ABC transporter JH290_02975 PF00593 TonB dependent receptor JH290_02975 PF07715 TonB-dependent Receptor Plug Domain JH290_03005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JH290_03005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JH290_03045 PF13823 Alcohol dehydrogenase GroES-associated JH290_03045 PF08240 Alcohol dehydrogenase GroES-like domain JH290_03045 PF00107 Zinc-binding dehydrogenase JH290_03060 PF00664 ABC transporter transmembrane region JH290_03060 PF00005 ABC transporter JH290_03070 PF03275 UDP-galactopyranose mutase JH290_03080 PF16363 GDP-mannose 4,6 dehydratase JH290_03100 PF02322 Cytochrome bd terminal oxidase subunit II JH290_03105 PF01654 Cytochrome bd terminal oxidase subunit I JH290_03115 PF00158 Sigma-54 interaction domain JH290_03115 PF00072 Response regulator receiver domain JH290_03115 PF02954 Bacterial regulatory protein, Fis family JH290_03130 PF01339 CheB methylesterase JH290_03130 PF01739 CheR methyltransferase, SAM binding domain JH290_03130 PF08448 PAS fold JH290_03130 PF03705 CheR methyltransferase, all-alpha domain JH290_03145 PF05067 Manganese containing catalase JH290_03150 PF05974 Domain of unknown function (DUF892) JH290_03155 PF05974 Domain of unknown function (DUF892) JH290_03160 PF00857 Isochorismatase family JH290_03180 PF00672 HAMP domain JH290_03180 PF02743 Cache domain JH290_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_03180 PF06580 Histidine kinase JH290_03185 PF04397 LytTr DNA-binding domain JH290_03185 PF00072 Response regulator receiver domain JH290_03195 PF13520 Amino acid permease JH290_03210 PF01431 Peptidase family M13 JH290_03210 PF05649 Peptidase family M13 JH290_03220 PF00248 Aldo/keto reductase family JH290_03225 PF03358 NADPH-dependent FMN reductase JH290_03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_03230 PF03466 LysR substrate binding domain JH290_03235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JH290_03245 PF03167 Uracil DNA glycosylase superfamily JH290_03250 PF02469 Fasciclin domain JH290_03255 PF03795 YCII-related domain JH290_03260 PF00999 Sodium/hydrogen exchanger family JH290_03265 PF00005 ABC transporter JH290_03270 PF01061 ABC-2 type transporter JH290_03295 PF13677 Membrane MotB of proton-channel complex MotA/MotB JH290_03295 PF00691 OmpA family JH290_03300 PF01618 MotA/TolQ/ExbB proton channel family JH290_03310 PF01641 SelR domain JH290_03320 PF01037 Lrp/AsnC ligand binding domain JH290_03325 PF01266 FAD dependent oxidoreductase JH290_03330 PF00842 Alanine racemase, C-terminal domain JH290_03330 PF01168 Alanine racemase, N-terminal domain JH290_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_03350 PF00989 PAS fold JH290_03350 PF00672 HAMP domain JH290_03350 PF18698 Histidine kinase sensor domain JH290_03350 PF00512 His Kinase A (phospho-acceptor) domain JH290_03360 PF07995 Glucose / Sorbosone dehydrogenase JH290_03370 PF05175 Methyltransferase small domain JH290_03370 PF08468 Methyltransferase small domain N-terminal JH290_03375 PF00849 RNA pseudouridylate synthase JH290_03375 PF01479 S4 domain JH290_03380 PF13419 Haloacid dehalogenase-like hydrolase JH290_03405 PF04461 Protein of unknown function (DUF520) JH290_03410 PF00892 EamA-like transporter family JH290_03415 PF00005 ABC transporter JH290_03415 PF09383 NIL domain JH290_03420 PF00528 Binding-protein-dependent transport system inner membrane component JH290_03425 PF03180 NLPA lipoprotein JH290_03450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JH290_03450 PF00364 Biotin-requiring enzyme JH290_03450 PF02817 e3 binding domain JH290_03460 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_03460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH290_03465 PF01979 Amidohydrolase family JH290_03480 PF00119 ATP synthase A chain JH290_03485 PF00137 ATP synthase subunit C JH290_03490 PF00430 ATP synthase B/B' CF(0) JH290_03495 PF00213 ATP synthase delta (OSCP) subunit JH290_03500 PF02874 ATP synthase alpha/beta family, beta-barrel domain JH290_03500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH290_03500 PF00306 ATP synthase alpha/beta chain, C terminal domain JH290_03505 PF00231 ATP synthase JH290_03510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH290_03510 PF02874 ATP synthase alpha/beta family, beta-barrel domain JH290_03515 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JH290_03515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JH290_03530 PF14602 Hexapeptide repeat of succinyl-transferase JH290_03530 PF12804 MobA-like NTP transferase domain JH290_03530 PF00132 Bacterial transferase hexapeptide (six repeats) JH290_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_03545 PF00512 His Kinase A (phospho-acceptor) domain JH290_03550 PF02954 Bacterial regulatory protein, Fis family JH290_03550 PF00072 Response regulator receiver domain JH290_03550 PF00158 Sigma-54 interaction domain JH290_03560 PF00005 ABC transporter JH290_03560 PF12704 MacB-like periplasmic core domain JH290_03560 PF02687 FtsX-like permease family JH290_03565 PF12704 MacB-like periplasmic core domain JH290_03565 PF02687 FtsX-like permease family JH290_03565 PF00005 ABC transporter JH290_03570 PF00005 ABC transporter JH290_03575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_03580 PF01380 SIS domain JH290_03610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH290_03615 PF05275 Copper resistance protein B precursor (CopB) JH290_03620 PF00394 Multicopper oxidase JH290_03620 PF07732 Multicopper oxidase JH290_03620 PF07731 Multicopper oxidase JH290_03630 PF00291 Pyridoxal-phosphate dependent enzyme JH290_03635 PF01432 Peptidase family M3 JH290_03640 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_03640 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_03645 PF07977 FabA-like domain JH290_03650 PF11799 impB/mucB/samB family C-terminal domain JH290_03650 PF00817 impB/mucB/samB family JH290_03650 PF11798 IMS family HHH motif JH290_03655 PF13419 Haloacid dehalogenase-like hydrolase JH290_03665 PF13185 GAF domain JH290_03680 PF01242 6-pyruvoyl tetrahydropterin synthase JH290_03685 PF00271 Helicase conserved C-terminal domain JH290_03685 PF00270 DEAD/DEAH box helicase JH290_03695 PF14497 Glutathione S-transferase, C-terminal domain JH290_03695 PF02798 Glutathione S-transferase, N-terminal domain JH290_03700 PF00437 Type II/IV secretion system protein JH290_03720 PF00291 Pyridoxal-phosphate dependent enzyme JH290_03720 PF00571 CBS domain JH290_03725 PF01053 Cys/Met metabolism PLP-dependent enzyme JH290_03740 PF00005 ABC transporter JH290_03745 PF00069 Protein kinase domain JH290_03745 PF13847 Methyltransferase domain JH290_03750 PF13439 Glycosyltransferase Family 4 JH290_03750 PF00534 Glycosyl transferases group 1 JH290_03765 PF16363 GDP-mannose 4,6 dehydratase JH290_03770 PF16363 GDP-mannose 4,6 dehydratase JH290_03790 PF00535 Glycosyl transferase family 2 JH290_03795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JH290_03805 PF00766 Electron transfer flavoprotein FAD-binding domain JH290_03805 PF01012 Electron transfer flavoprotein domain JH290_03810 PF01012 Electron transfer flavoprotein domain JH290_03815 PF16363 GDP-mannose 4,6 dehydratase JH290_03820 PF00483 Nucleotidyl transferase JH290_03825 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JH290_03830 PF04321 RmlD substrate binding domain JH290_03835 PF00483 Nucleotidyl transferase JH290_03835 PF01050 Mannose-6-phosphate isomerase JH290_03840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JH290_03840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JH290_03840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JH290_03840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JH290_03845 PF01144 Coenzyme A transferase JH290_03850 PF01144 Coenzyme A transferase JH290_03855 PF14307 Glycosyltransferase WbsX JH290_03855 PF05045 Rhamnan synthesis protein F JH290_03880 PF03886 ABC-type transport auxiliary lipoprotein component JH290_03880 PF02470 MlaD protein JH290_03885 PF00005 ABC transporter JH290_03890 PF02405 Permease MlaE JH290_03900 PF00816 H-NS histone family JH290_03905 PF04073 Aminoacyl-tRNA editing domain JH290_03905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH290_03905 PF03129 Anticodon binding domain JH290_03915 PF01066 CDP-alcohol phosphatidyltransferase JH290_03930 PF00544 Pectate lyase JH290_03940 PF10458 Valyl tRNA synthetase tRNA binding arm JH290_03940 PF08264 Anticodon-binding domain of tRNA JH290_03940 PF00133 tRNA synthetases class I (I, L, M and V) JH290_03960 PF00883 Cytosol aminopeptidase family, catalytic domain JH290_03960 PF02789 Cytosol aminopeptidase family, N-terminal domain JH290_03970 PF03739 Lipopolysaccharide export system permease LptF/LptG JH290_03985 PF02899 Phage integrase, N-terminal SAM-like domain JH290_03985 PF00589 Phage integrase family JH290_03990 PF13098 Thioredoxin-like domain JH290_03990 PF10411 Disulfide bond isomerase protein N-terminus JH290_03995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JH290_03995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JH290_03995 PF02769 AIR synthase related protein, C-terminal domain JH290_04005 PF03895 YadA-like membrane anchor domain JH290_04005 PF05658 Head domain of trimeric autotransporter adhesin JH290_04005 PF13018 Extended Signal Peptide of Type V secretion system JH290_04005 PF05662 Coiled stalk of trimeric autotransporter adhesin JH290_04010 PF00082 Subtilase family JH290_04010 PF04151 Bacterial pre-peptidase C-terminal domain JH290_04015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JH290_04015 PF00437 Type II/IV secretion system protein JH290_04020 PF00482 Type II secretion system (T2SS), protein F JH290_04025 PF08334 Type II secretion system (T2SS), protein G JH290_04030 PF12019 Type II transport protein GspH JH290_04035 PF07963 Prokaryotic N-terminal methylation motif JH290_04045 PF03934 Type II secretion system (T2SS), protein K JH290_04050 PF05137 Fimbrial assembly protein (PilN) JH290_04055 PF10741 Type II secretion system (T2SS), protein M subtype b JH290_04065 PF00263 Bacterial type II and III secretion system protein JH290_04065 PF03958 Bacterial type II/III secretion system short domain JH290_04075 PF07702 UTRA domain JH290_04075 PF00392 Bacterial regulatory proteins, gntR family JH290_04085 PF07715 TonB-dependent Receptor Plug Domain JH290_04085 PF00593 TonB dependent receptor JH290_04125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JH290_04125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JH290_04135 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JH290_04150 PF03960 ArsC family JH290_04155 PF01327 Polypeptide deformylase JH290_04160 PF12848 ABC transporter JH290_04160 PF00005 ABC transporter JH290_04170 PF00464 Serine hydroxymethyltransferase JH290_04175 PF03477 ATP cone domain JH290_04185 PF01872 RibD C-terminal domain JH290_04185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JH290_04195 PF00677 Lumazine binding domain JH290_04200 PF00925 GTP cyclohydrolase II JH290_04200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JH290_04205 PF00885 6,7-dimethyl-8-ribityllumazine synthase JH290_04210 PF01029 NusB family JH290_04215 PF02769 AIR synthase related protein, C-terminal domain JH290_04215 PF00586 AIR synthase related protein, N-terminal domain JH290_04230 PF03814 Potassium-transporting ATPase A subunit JH290_04240 PF02669 K+-transporting ATPase, c chain JH290_04245 PF00512 His Kinase A (phospho-acceptor) domain JH290_04245 PF13492 GAF domain JH290_04245 PF02702 Osmosensitive K+ channel His kinase sensor domain JH290_04245 PF13493 Domain of unknown function (DUF4118) JH290_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_04250 PF00072 Response regulator receiver domain JH290_04250 PF00486 Transcriptional regulatory protein, C terminal JH290_04255 PF02913 FAD linked oxidases, C-terminal domain JH290_04255 PF01565 FAD binding domain JH290_04260 PF04307 LexA-binding, inner membrane-associated putative hydrolase JH290_04265 PF02021 Uncharacterised protein family UPF0102 JH290_04275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JH290_04305 PF02381 MraZ protein, putative antitoxin-like JH290_04310 PF01795 MraW methylase family JH290_04315 PF04999 Cell division protein FtsL JH290_04320 PF03717 Penicillin-binding Protein dimerisation domain JH290_04320 PF00905 Penicillin binding protein transpeptidase domain JH290_04325 PF01225 Mur ligase family, catalytic domain JH290_04325 PF02875 Mur ligase family, glutamate ligase domain JH290_04325 PF08245 Mur ligase middle domain JH290_04330 PF08245 Mur ligase middle domain JH290_04330 PF02875 Mur ligase family, glutamate ligase domain JH290_04330 PF01225 Mur ligase family, catalytic domain JH290_04335 PF00953 Glycosyl transferase family 4 JH290_04340 PF01098 Cell cycle protein JH290_04345 PF04101 Glycosyltransferase family 28 C-terminal domain JH290_04345 PF03033 Glycosyltransferase family 28 N-terminal domain JH290_04350 PF01225 Mur ligase family, catalytic domain JH290_04350 PF02875 Mur ligase family, glutamate ligase domain JH290_04350 PF08245 Mur ligase middle domain JH290_04355 PF01820 D-ala D-ala ligase N-terminus JH290_04355 PF07478 D-ala D-ala ligase C-terminus JH290_04360 PF08478 POTRA domain, FtsQ-type JH290_04360 PF03799 Cell division protein FtsQ JH290_04365 PF02491 SHS2 domain inserted in FTSA JH290_04370 PF12327 FtsZ family, C-terminal domain JH290_04370 PF00091 Tubulin/FtsZ family, GTPase domain JH290_04375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JH290_04385 PF01476 LysM domain JH290_04385 PF08525 Opacity-associated protein A N-terminal motif JH290_04385 PF01551 Peptidase family M23 JH290_04390 PF07516 SecA Wing and Scaffold domain JH290_04390 PF01043 SecA preprotein cross-linking domain JH290_04390 PF02810 SEC-C motif JH290_04390 PF07517 SecA DEAD-like domain JH290_04400 PF00293 NUDIX domain JH290_04415 PF02219 Methylenetetrahydrofolate reductase JH290_04430 PF00698 Acyl transferase domain JH290_04430 PF14765 Polyketide synthase dehydratase JH290_04430 PF00550 Phosphopantetheine attachment site JH290_04430 PF08240 Alcohol dehydrogenase GroES-like domain JH290_04430 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_04430 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_04430 PF16197 Ketoacyl-synthetase C-terminal extension JH290_04430 PF00107 Zinc-binding dehydrogenase JH290_04430 PF08659 KR domain JH290_04445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH290_04470 PF00128 Alpha amylase, catalytic domain JH290_04500 PF05221 S-adenosyl-L-homocysteine hydrolase JH290_04500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JH290_04510 PF00311 Phosphoenolpyruvate carboxylase JH290_04530 PF00691 OmpA family JH290_04530 PF01389 OmpA-like transmembrane domain JH290_04545 PF00328 Histidine phosphatase superfamily (branch 2) JH290_04550 PF00438 S-adenosylmethionine synthetase, N-terminal domain JH290_04550 PF02772 S-adenosylmethionine synthetase, central domain JH290_04550 PF02773 S-adenosylmethionine synthetase, C-terminal domain JH290_04560 PF01207 Dihydrouridine synthase (Dus) JH290_04565 PF00294 pfkB family carbohydrate kinase JH290_04565 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH290_04570 PF07670 Nucleoside recognition JH290_04570 PF07662 Na+ dependent nucleoside transporter C-terminus JH290_04570 PF01773 Na+ dependent nucleoside transporter N-terminus JH290_04575 PF00248 Aldo/keto reductase family JH290_04585 PF07715 TonB-dependent Receptor Plug Domain JH290_04585 PF00593 TonB dependent receptor JH290_04605 PF00528 Binding-protein-dependent transport system inner membrane component JH290_04610 PF00005 ABC transporter JH290_04620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JH290_04630 PF00005 ABC transporter JH290_04635 PF13472 GDSL-like Lipase/Acylhydrolase family JH290_04640 PF00486 Transcriptional regulatory protein, C terminal JH290_04640 PF00072 Response regulator receiver domain JH290_04645 PF08521 Two-component sensor kinase N-terminal JH290_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_04645 PF00512 His Kinase A (phospho-acceptor) domain JH290_04655 PF01219 Prokaryotic diacylglycerol kinase JH290_04675 PF01790 Prolipoprotein diacylglyceryl transferase JH290_04680 PF00303 Thymidylate synthase JH290_04685 PF00186 Dihydrofolate reductase JH290_04690 PF00149 Calcineurin-like phosphoesterase JH290_04695 PF04379 ApaG domain JH290_04700 PF00398 Ribosomal RNA adenine dimethylase JH290_04705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JH290_04710 PF00639 PPIC-type PPIASE domain JH290_04710 PF09312 SurA N-terminal domain JH290_04715 PF03968 OstA-like protein JH290_04715 PF04453 LPS transport system D JH290_04720 PF00850 Histone deacetylase domain JH290_04725 PF01923 Cobalamin adenosyltransferase JH290_04735 PF01494 FAD binding domain JH290_04740 PF01494 FAD binding domain JH290_04760 PF00392 Bacterial regulatory proteins, gntR family JH290_04760 PF07729 FCD domain JH290_04765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JH290_04770 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JH290_04770 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JH290_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_04775 PF03466 LysR substrate binding domain JH290_04780 PF13193 AMP-binding enzyme C-terminal domain JH290_04780 PF00501 AMP-binding enzyme JH290_04785 PF00171 Aldehyde dehydrogenase family JH290_04790 PF00378 Enoyl-CoA hydratase/isomerase JH290_04810 PF08450 SMP-30/Gluconolactonase/LRE-like region JH290_04815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH290_04815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH290_04820 PF01728 FtsJ-like methyltransferase JH290_04820 PF18125 RlmM ferredoxin-like domain JH290_04840 PF00892 EamA-like transporter family JH290_04845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JH290_04845 PF12833 Helix-turn-helix domain JH290_04850 PF00749 tRNA synthetases class I (E and Q), catalytic domain JH290_04850 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JH290_04865 PF00990 Diguanylate cyclase, GGDEF domain JH290_04865 PF00072 Response regulator receiver domain JH290_04870 PF17149 Periplasmic sensor domain found in signal transduction proteins JH290_04870 PF00672 HAMP domain JH290_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_04870 PF00512 His Kinase A (phospho-acceptor) domain JH290_04870 PF01627 Hpt domain JH290_04870 PF00072 Response regulator receiver domain JH290_04875 PF00196 Bacterial regulatory proteins, luxR family JH290_04875 PF00072 Response regulator receiver domain JH290_04885 PF01625 Peptide methionine sulfoxide reductase JH290_04895 PF00923 Transaldolase/Fructose-6-phosphate aldolase JH290_04900 PF01272 Transcription elongation factor, GreA/GreB, C-term JH290_04900 PF14760 Rnk N-terminus JH290_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_04905 PF03466 LysR substrate binding domain JH290_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_04910 PF13192 Thioredoxin domain JH290_04915 PF10417 C-terminal domain of 1-Cys peroxiredoxin JH290_04915 PF00578 AhpC/TSA family JH290_04920 PF05175 Methyltransferase small domain JH290_04920 PF17827 PrmC N-terminal domain JH290_04925 PF00561 alpha/beta hydrolase fold JH290_04935 PF00293 NUDIX domain JH290_04940 PF01367 5'-3' exonuclease, C-terminal SAM fold JH290_04940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JH290_04940 PF00476 DNA polymerase family A JH290_04940 PF01612 3'-5' exonuclease JH290_04945 PF00881 Nitroreductase family JH290_05010 PF01063 Amino-transferase class IV JH290_05015 PF04151 Bacterial pre-peptidase C-terminal domain JH290_05015 PF00082 Subtilase family JH290_05020 PF04151 Bacterial pre-peptidase C-terminal domain JH290_05020 PF00082 Subtilase family JH290_05025 PF04151 Bacterial pre-peptidase C-terminal domain JH290_05025 PF00082 Subtilase family JH290_05030 PF04073 Aminoacyl-tRNA editing domain JH290_05040 PF17189 Glycosyl hydrolase family 30 beta sandwich domain JH290_05040 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain JH290_05050 PF03358 NADPH-dependent FMN reductase JH290_05055 PF03631 Virulence factor BrkB JH290_05060 PF08534 Redoxin JH290_05065 PF00708 Acylphosphatase JH290_05075 PF03976 Polyphosphate kinase 2 (PPK2) JH290_05080 PF00994 Probable molybdopterin binding domain JH290_05090 PF03462 PCRF domain JH290_05090 PF00472 RF-1 domain JH290_05095 PF01488 Shikimate / quinate 5-dehydrogenase JH290_05095 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JH290_05095 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JH290_05105 PF03550 Outer membrane lipoprotein LolB JH290_05110 PF08544 GHMP kinases C terminal JH290_05110 PF00288 GHMP kinases N terminal domain JH290_05120 PF14572 Phosphoribosyl synthetase-associated domain JH290_05120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JH290_05125 PF01386 Ribosomal L25p family JH290_05125 PF14693 Ribosomal protein TL5, C-terminal domain JH290_05130 PF01195 Peptidyl-tRNA hydrolase JH290_05135 PF06071 Protein of unknown function (DUF933) JH290_05135 PF01926 50S ribosome-binding GTPase JH290_05155 PF00009 Elongation factor Tu GTP binding domain JH290_05155 PF03144 Elongation factor Tu domain 2 JH290_05155 PF03143 Elongation factor Tu C-terminal domain JH290_05165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JH290_05170 PF00467 KOW motif JH290_05170 PF02357 Transcription termination factor nusG JH290_05175 PF00298 Ribosomal protein L11, RNA binding domain JH290_05175 PF03946 Ribosomal protein L11, N-terminal domain JH290_05180 PF00687 Ribosomal protein L1p/L10e family JH290_05185 PF00466 Ribosomal protein L10 JH290_05190 PF16320 Ribosomal protein L7/L12 dimerisation domain JH290_05190 PF00542 Ribosomal protein L7/L12 C-terminal domain JH290_05195 PF04561 RNA polymerase Rpb2, domain 2 JH290_05195 PF04563 RNA polymerase beta subunit JH290_05195 PF10385 RNA polymerase beta subunit external 1 domain JH290_05195 PF00562 RNA polymerase Rpb2, domain 6 JH290_05195 PF04560 RNA polymerase Rpb2, domain 7 JH290_05195 PF04565 RNA polymerase Rpb2, domain 3 JH290_05200 PF04997 RNA polymerase Rpb1, domain 1 JH290_05200 PF00623 RNA polymerase Rpb1, domain 2 JH290_05200 PF04983 RNA polymerase Rpb1, domain 3 JH290_05200 PF05000 RNA polymerase Rpb1, domain 4 JH290_05200 PF04998 RNA polymerase Rpb1, domain 5 JH290_05205 PF00164 Ribosomal protein S12/S23 JH290_05210 PF00177 Ribosomal protein S7p/S5e JH290_05215 PF00679 Elongation factor G C-terminus JH290_05215 PF14492 Elongation Factor G, domain II JH290_05215 PF03764 Elongation factor G, domain IV JH290_05215 PF00009 Elongation factor Tu GTP binding domain JH290_05215 PF03144 Elongation factor Tu domain 2 JH290_05220 PF03143 Elongation factor Tu C-terminal domain JH290_05220 PF03144 Elongation factor Tu domain 2 JH290_05220 PF00009 Elongation factor Tu GTP binding domain JH290_05225 PF00338 Ribosomal protein S10p/S20e JH290_05230 PF00297 Ribosomal protein L3 JH290_05235 PF00573 Ribosomal protein L4/L1 family JH290_05240 PF00276 Ribosomal protein L23 JH290_05245 PF00181 Ribosomal Proteins L2, RNA binding domain JH290_05245 PF03947 Ribosomal Proteins L2, C-terminal domain JH290_05250 PF00203 Ribosomal protein S19 JH290_05255 PF00237 Ribosomal protein L22p/L17e JH290_05260 PF07650 KH domain JH290_05260 PF00189 Ribosomal protein S3, C-terminal domain JH290_05265 PF00252 Ribosomal protein L16p/L10e JH290_05270 PF00831 Ribosomal L29 protein JH290_05275 PF00366 Ribosomal protein S17 JH290_05280 PF00238 Ribosomal protein L14p/L23e JH290_05285 PF00467 KOW motif JH290_05285 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JH290_05290 PF00281 Ribosomal protein L5 JH290_05290 PF00673 ribosomal L5P family C-terminus JH290_05295 PF00253 Ribosomal protein S14p/S29e JH290_05300 PF00410 Ribosomal protein S8 JH290_05305 PF00347 Ribosomal protein L6 JH290_05310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JH290_05315 PF00333 Ribosomal protein S5, N-terminal domain JH290_05315 PF03719 Ribosomal protein S5, C-terminal domain JH290_05320 PF00327 Ribosomal protein L30p/L7e JH290_05325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JH290_05330 PF00344 SecY translocase JH290_05335 PF00416 Ribosomal protein S13/S18 JH290_05340 PF00411 Ribosomal protein S11 JH290_05345 PF01479 S4 domain JH290_05345 PF00163 Ribosomal protein S4/S9 N-terminal domain JH290_05350 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JH290_05350 PF01000 RNA polymerase Rpb3/RpoA insert domain JH290_05350 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JH290_05355 PF01196 Ribosomal protein L17 JH290_05365 PF02600 Disulfide bond formation protein DsbB JH290_05370 PF01474 Class-II DAHP synthetase family JH290_05385 PF01425 Amidase JH290_05395 PF00009 Elongation factor Tu GTP binding domain JH290_05395 PF03144 Elongation factor Tu domain 2 JH290_05395 PF00679 Elongation factor G C-terminus JH290_05400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JH290_05405 PF00056 lactate/malate dehydrogenase, NAD binding domain JH290_05405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH290_05410 PF02798 Glutathione S-transferase, N-terminal domain JH290_05410 PF00043 Glutathione S-transferase, C-terminal domain JH290_05425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_05425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JH290_05430 PF08240 Alcohol dehydrogenase GroES-like domain JH290_05430 PF00107 Zinc-binding dehydrogenase JH290_05435 PF05736 OprF membrane domain JH290_05435 PF00691 OmpA family JH290_05445 PF00849 RNA pseudouridylate synthase JH290_05455 PF00155 Aminotransferase class I and II JH290_05465 PF00528 Binding-protein-dependent transport system inner membrane component JH290_05470 PF00528 Binding-protein-dependent transport system inner membrane component JH290_05475 PF00005 ABC transporter JH290_05475 PF12857 TOBE-like domain JH290_05485 PF08240 Alcohol dehydrogenase GroES-like domain JH290_05485 PF00107 Zinc-binding dehydrogenase JH290_05495 PF05506 Domain of unknown function (DUF756) JH290_05495 PF04185 Phosphoesterase family JH290_05500 PF00300 Histidine phosphatase superfamily (branch 1) JH290_05515 PF02875 Mur ligase family, glutamate ligase domain JH290_05515 PF08245 Mur ligase middle domain JH290_05530 PF00156 Phosphoribosyl transferase domain JH290_05535 PF04305 Protein of unknown function (DUF455) JH290_05555 PF00149 Calcineurin-like phosphoesterase JH290_05560 PF01569 PAP2 superfamily JH290_05565 PF13439 Glycosyltransferase Family 4 JH290_05565 PF00534 Glycosyl transferases group 1 JH290_05570 PF02541 Ppx/GppA phosphatase family JH290_05575 PF02503 Polyphosphate kinase middle domain JH290_05575 PF17941 Polyphosphate kinase C-terminal domain 1 JH290_05575 PF13089 Polyphosphate kinase N-terminal domain JH290_05575 PF13090 Polyphosphate kinase C-terminal domain 2 JH290_05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_05580 PF00512 His Kinase A (phospho-acceptor) domain JH290_05580 PF00989 PAS fold JH290_05580 PF11808 Phosphate regulon sensor protein PhoR JH290_05585 PF00072 Response regulator receiver domain JH290_05585 PF00486 Transcriptional regulatory protein, C terminal JH290_05590 PF01435 Peptidase family M48 JH290_05590 PF13181 Tetratricopeptide repeat JH290_05595 PF00462 Glutaredoxin JH290_05605 PF00180 Isocitrate/isopropylmalate dehydrogenase JH290_05605 PF18324 Hypothetical protein TT1725 JH290_05640 PF05697 Bacterial trigger factor protein (TF) JH290_05640 PF05698 Bacterial trigger factor protein (TF) C-terminus JH290_05645 PF00574 Clp protease JH290_05650 PF07724 AAA domain (Cdc48 subfamily) JH290_05650 PF10431 C-terminal, D2-small domain, of ClpB protein JH290_05650 PF06689 ClpX C4-type zinc finger JH290_05655 PF00004 ATPase family associated with various cellular activities (AAA) JH290_05655 PF05362 Lon protease (S16) C-terminal proteolytic domain JH290_05655 PF02190 ATP-dependent protease La (LON) substrate-binding domain JH290_05660 PF00216 Bacterial DNA-binding protein JH290_05685 PF05257 CHAP domain JH290_05685 PF01476 LysM domain JH290_05690 PF16123 Hydroxyacylglutathione hydrolase C-terminus JH290_05690 PF00753 Metallo-beta-lactamase superfamily JH290_05700 PF00075 RNase H JH290_05705 PF00929 Exonuclease JH290_05725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JH290_05735 PF00753 Metallo-beta-lactamase superfamily JH290_05735 PF12706 Beta-lactamase superfamily domain JH290_05740 PF06463 Molybdenum Cofactor Synthesis C JH290_05740 PF04055 Radical SAM superfamily JH290_05750 PF01967 MoaC family JH290_05755 PF02597 ThiS family JH290_05760 PF02391 MoaE protein JH290_05775 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JH290_05775 PF12170 DNA polymerase III tau subunit V interacting with alpha JH290_05775 PF12169 DNA polymerase III subunits gamma and tau domain III JH290_05780 PF02575 YbaB/EbfC DNA-binding family JH290_05785 PF02132 RecR protein JH290_05785 PF13662 Toprim domain JH290_05790 PF01230 HIT domain JH290_05800 PF13559 Domain of unknown function (DUF4129) JH290_05800 PF01841 Transglutaminase-like superfamily JH290_05800 PF11992 Domain of unknown function (DUF3488) JH290_05810 PF17863 AAA lid domain JH290_05810 PF07726 ATPase family associated with various cellular activities (AAA) JH290_05820 PF00535 Glycosyl transferase family 2 JH290_05840 PF02545 Maf-like protein JH290_05845 PF02620 Large ribosomal RNA subunit accumulation protein YceD JH290_05850 PF01783 Ribosomal L32p protein family JH290_05855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JH290_05855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JH290_05860 PF00698 Acyl transferase domain JH290_05870 PF00550 Phosphopantetheine attachment site JH290_05875 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_05875 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_05880 PF00425 chorismate binding enzyme JH290_05880 PF04715 Anthranilate synthase component I, N terminal region JH290_05885 PF02618 YceG-like family JH290_05890 PF09115 DNA polymerase III, delta subunit, C terminal JH290_05915 PF02954 Bacterial regulatory protein, Fis family JH290_05915 PF06506 Propionate catabolism activator JH290_05915 PF00158 Sigma-54 interaction domain JH290_05925 PF00285 Citrate synthase, C-terminal domain JH290_05930 PF00330 Aconitase family (aconitate hydratase) JH290_05930 PF00694 Aconitase C-terminal domain JH290_05935 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JH290_05945 PF04303 PrpF protein JH290_05950 PF07715 TonB-dependent Receptor Plug Domain JH290_05950 PF00593 TonB dependent receptor JH290_05960 PF01835 MG2 domain JH290_05960 PF17962 Bacterial macroglobulin domain 6 JH290_05960 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JH290_05960 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JH290_05960 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JH290_05960 PF00207 Alpha-2-macroglobulin family JH290_05960 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JH290_05960 PF07703 Alpha-2-macroglobulin bait region domain JH290_05985 PF00905 Penicillin binding protein transpeptidase domain JH290_05985 PF00912 Transglycosylase JH290_05985 PF06832 Penicillin-Binding Protein C-terminus Family JH290_05995 PF08534 Redoxin JH290_06000 PF00011 Hsp20/alpha crystallin family JH290_06005 PF01556 DnaJ C terminal domain JH290_06005 PF00226 DnaJ domain JH290_06010 PF00072 Response regulator receiver domain JH290_06015 PF01145 SPFH domain / Band 7 family JH290_06015 PF12221 Bacterial membrane protein N terminal JH290_06020 PF01145 SPFH domain / Band 7 family JH290_06030 PF00709 Adenylosuccinate synthetase JH290_06035 PF01433 Peptidase family M1 domain JH290_06035 PF11838 ERAP1-like C-terminal domain JH290_06080 PF02384 N-6 DNA Methylase JH290_06095 PF12008 Type I restriction and modification enzyme - subunit R C terminal JH290_06095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JH290_06095 PF18766 SWI2/SNF2 ATPase JH290_06125 PF13456 Reverse transcriptase-like JH290_06125 PF00300 Histidine phosphatase superfamily (branch 1) JH290_06130 PF01256 Carbohydrate kinase JH290_06145 PF00723 Glycosyl hydrolases family 15 JH290_06165 PF00106 short chain dehydrogenase JH290_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_06195 PF17755 UvrA DNA-binding domain JH290_06205 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_06205 PF14310 Fibronectin type III-like domain JH290_06205 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_06210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JH290_06210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JH290_06215 PF03450 CO dehydrogenase flavoprotein C-terminal domain JH290_06215 PF00941 FAD binding domain in molybdopterin dehydrogenase JH290_06220 PF01799 [2Fe-2S] binding domain JH290_06220 PF00111 2Fe-2S iron-sulfur cluster binding domain JH290_06220 PF10518 TAT (twin-arginine translocation) pathway signal sequence JH290_06250 PF00717 Peptidase S24-like JH290_06250 PF01726 LexA DNA binding domain JH290_06265 PF14579 Helix-hairpin-helix motif JH290_06265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JH290_06265 PF07733 Bacterial DNA polymerase III alpha NTPase domain JH290_06265 PF02811 PHP domain JH290_06275 PF03169 OPT oligopeptide transporter protein JH290_06285 PF00326 Prolyl oligopeptidase family JH290_06285 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JH290_06285 PF07676 WD40-like Beta Propeller Repeat JH290_06305 PF02311 AraC-like ligand binding domain JH290_06305 PF12833 Helix-turn-helix domain JH290_06320 PF00199 Catalase JH290_06320 PF06628 Catalase-related immune-responsive JH290_06320 PF18011 C-terminal domain found in long catalases JH290_06325 PF00248 Aldo/keto reductase family JH290_06340 PF02347 Glycine cleavage system P-protein JH290_06345 PF07690 Major Facilitator Superfamily JH290_06365 PF00884 Sulfatase JH290_06365 PF08019 Phosphoethanolamine transferase EptA/EptB JH290_06380 PF00486 Transcriptional regulatory protein, C terminal JH290_06380 PF00072 Response regulator receiver domain JH290_06385 PF00512 His Kinase A (phospho-acceptor) domain JH290_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06395 PF03776 Septum formation topological specificity factor MinE JH290_06400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JH290_06405 PF05209 Septum formation inhibitor MinC, N-terminal domain JH290_06405 PF03775 Septum formation inhibitor MinC, C-terminal domain JH290_06415 PF07730 Histidine kinase JH290_06420 PF00196 Bacterial regulatory proteins, luxR family JH290_06420 PF00072 Response regulator receiver domain JH290_06450 PF00730 HhH-GPD superfamily base excision DNA repair protein JH290_06455 PF01565 FAD binding domain JH290_06485 PF02222 ATP-grasp domain JH290_06485 PF01370 NAD dependent epimerase/dehydratase family JH290_06505 PF04377 Arginine-tRNA-protein transferase, C terminus JH290_06505 PF04376 Arginine-tRNA-protein transferase, N terminus JH290_06515 PF04542 Sigma-70 region 2 JH290_06515 PF08281 Sigma-70, region 4 JH290_06530 PF00378 Enoyl-CoA hydratase/isomerase JH290_06540 PF17760 UvrA interaction domain JH290_06540 PF17755 UvrA DNA-binding domain JH290_06540 PF00005 ABC transporter JH290_06545 PF00829 Ribosomal prokaryotic L21 protein JH290_06550 PF01016 Ribosomal L27 protein JH290_06555 PF01018 GTP1/OBG JH290_06555 PF01926 50S ribosome-binding GTPase JH290_06560 PF01649 Ribosomal protein S20 JH290_06565 PF03023 Lipid II flippase MurJ JH290_06570 PF06574 FAD synthetase JH290_06570 PF01687 Riboflavin kinase JH290_06575 PF06827 Zinc finger found in FPG and IleRS JH290_06575 PF08264 Anticodon-binding domain of tRNA JH290_06575 PF00133 tRNA synthetases class I (I, L, M and V) JH290_06580 PF01252 Signal peptidase (SPase) II JH290_06585 PF02401 LytB protein JH290_06595 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JH290_06595 PF06481 COX Aromatic Rich Motif JH290_06600 PF00115 Cytochrome C and Quinol oxidase polypeptide I JH290_06605 PF00510 Cytochrome c oxidase subunit III JH290_06610 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JH290_06620 PF18073 Rubredoxin metal binding domain JH290_06625 PF05656 Protein of unknown function (DUF805) JH290_06635 PF12833 Helix-turn-helix domain JH290_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06640 PF00183 Hsp90 protein JH290_06650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JH290_06655 PF01740 STAS domain JH290_06655 PF08678 Rsbr N terminal JH290_06660 PF01740 STAS domain JH290_06665 PF13581 Histidine kinase-like ATPase domain JH290_06675 PF00512 His Kinase A (phospho-acceptor) domain JH290_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06680 PF08448 PAS fold JH290_06680 PF00512 His Kinase A (phospho-acceptor) domain JH290_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06680 PF13188 PAS domain JH290_06680 PF00072 Response regulator receiver domain JH290_06695 PF00593 TonB dependent receptor JH290_06695 PF07715 TonB-dependent Receptor Plug Domain JH290_06700 PF00085 Thioredoxin JH290_06705 PF07237 Protein of unknown function (DUF1428) JH290_06710 PF13493 Domain of unknown function (DUF4118) JH290_06710 PF00512 His Kinase A (phospho-acceptor) domain JH290_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06710 PF13492 GAF domain JH290_06710 PF02702 Osmosensitive K+ channel His kinase sensor domain JH290_06715 PF01339 CheB methylesterase JH290_06720 PF01739 CheR methyltransferase, SAM binding domain JH290_06720 PF03705 CheR methyltransferase, all-alpha domain JH290_06725 PF00672 HAMP domain JH290_06725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06725 PF00512 His Kinase A (phospho-acceptor) domain JH290_06725 PF01627 Hpt domain JH290_06725 PF00072 Response regulator receiver domain JH290_06725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JH290_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_06730 PF13426 PAS domain JH290_06730 PF00072 Response regulator receiver domain JH290_06735 PF00072 Response regulator receiver domain JH290_06755 PF03466 LysR substrate binding domain JH290_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_06760 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JH290_06765 PF01263 Aldose 1-epimerase JH290_06770 PF01578 Cytochrome C assembly protein JH290_06775 PF02978 Signal peptide binding domain JH290_06775 PF00448 SRP54-type protein, GTPase domain JH290_06775 PF02881 SRP54-type protein, helical bundle domain JH290_06785 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) JH290_06790 PF03060 Nitronate monooxygenase JH290_06800 PF00886 Ribosomal protein S16 JH290_06805 PF05239 PRC-barrel domain JH290_06805 PF01782 RimM N-terminal domain JH290_06810 PF01746 tRNA (Guanine-1)-methyltransferase JH290_06815 PF01245 Ribosomal protein L19 JH290_06820 PF01554 MatE JH290_06825 PF01479 S4 domain JH290_06830 PF00141 Peroxidase JH290_06840 PF01624 MutS domain I JH290_06840 PF05188 MutS domain II JH290_06840 PF05192 MutS domain III JH290_06840 PF05190 MutS family domain IV JH290_06840 PF00488 MutS domain V JH290_06850 PF03301 Tryptophan 2,3-dioxygenase JH290_06860 PF00266 Aminotransferase class-V JH290_06870 PF00155 Aminotransferase class I and II JH290_06875 PF00440 Bacterial regulatory proteins, tetR family JH290_06885 PF05819 NolX protein JH290_06905 PF03211 Pectate lyase JH290_06935 PF01313 Bacterial export proteins, family 3 JH290_06940 PF00813 FliP family JH290_06955 PF00771 FHIPEP family JH290_06960 PF01312 FlhB HrpN YscU SpaS Family JH290_06975 PF01514 Secretory protein of YscJ/FliF family JH290_06990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH290_06990 PF02874 ATP synthase alpha/beta family, beta-barrel domain JH290_06990 PF18269 T3SS EscN ATPase C-terminal domain JH290_07005 PF00263 Bacterial type II and III secretion system protein JH290_07005 PF03958 Bacterial type II/III secretion system short domain JH290_07015 PF01464 Transglycosylase SLT domain JH290_07035 PF01527 Transposase JH290_07050 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_07050 PF14310 Fibronectin type III-like domain JH290_07050 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_07065 PF05598 Transposase domain (DUF772) JH290_07065 PF01609 Transposase DDE domain JH290_07085 PF05598 Transposase domain (DUF772) JH290_07085 PF01609 Transposase DDE domain JH290_07090 PF16355 Domain of unknown function (DUF4982) JH290_07090 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JH290_07090 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JH290_07090 PF02837 Glycosyl hydrolases family 2, sugar binding domain JH290_07090 PF00703 Glycosyl hydrolases family 2 JH290_07095 PF07745 Glycosyl hydrolase family 53 JH290_07105 PF01381 Helix-turn-helix JH290_07105 PF06114 IrrE N-terminal-like domain JH290_07105 PF09856 Predicted transcriptional regulator (DUF2083) JH290_07110 PF00171 Aldehyde dehydrogenase family JH290_07115 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_07115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_07115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_07120 PF00378 Enoyl-CoA hydratase/isomerase JH290_07125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JH290_07125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JH290_07125 PF00378 Enoyl-CoA hydratase/isomerase JH290_07130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JH290_07130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH290_07135 PF01545 Cation efflux family JH290_07140 PF00378 Enoyl-CoA hydratase/isomerase JH290_07140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JH290_07140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JH290_07145 PF04542 Sigma-70 region 2 JH290_07145 PF08281 Sigma-70, region 4 JH290_07155 PF13180 PDZ domain JH290_07160 PF00679 Elongation factor G C-terminus JH290_07160 PF00009 Elongation factor Tu GTP binding domain JH290_07160 PF03144 Elongation factor Tu domain 2 JH290_07160 PF06421 GTP-binding protein LepA C-terminus JH290_07165 PF10502 Signal peptidase, peptidase S26 JH290_07175 PF00035 Double-stranded RNA binding motif JH290_07175 PF14622 Ribonuclease-III-like JH290_07180 PF07650 KH domain JH290_07180 PF01926 50S ribosome-binding GTPase JH290_07185 PF11967 Recombination protein O N terminal JH290_07185 PF02565 Recombination protein O C terminal JH290_07190 PF00486 Transcriptional regulatory protein, C terminal JH290_07190 PF00072 Response regulator receiver domain JH290_07195 PF05958 tRNA (Uracil-5-)-methyltransferase JH290_07205 PF01928 CYTH domain JH290_07210 PF01323 DSBA-like thioredoxin domain JH290_07215 PF01266 FAD dependent oxidoreductase JH290_07215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JH290_07220 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JH290_07225 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_07230 PF00156 Phosphoribosyl transferase domain JH290_07235 PF01048 Phosphorylase superfamily JH290_07240 PF00313 'Cold-shock' DNA-binding domain JH290_07245 PF01494 FAD binding domain JH290_07255 PF00270 DEAD/DEAH box helicase JH290_07255 PF08494 DEAD/H associated JH290_07255 PF00271 Helicase conserved C-terminal domain JH290_07260 PF04679 ATP dependent DNA ligase C terminal region JH290_07260 PF01068 ATP dependent DNA ligase domain JH290_07260 PF04675 DNA ligase N terminus JH290_07270 PF04679 ATP dependent DNA ligase C terminal region JH290_07270 PF04675 DNA ligase N terminus JH290_07270 PF01068 ATP dependent DNA ligase domain JH290_07285 PF00072 Response regulator receiver domain JH290_07285 PF00990 Diguanylate cyclase, GGDEF domain JH290_07300 PF02803 Thiolase, C-terminal domain JH290_07300 PF00108 Thiolase, N-terminal domain JH290_07305 PF03797 Autotransporter beta-domain JH290_07305 PF00082 Subtilase family JH290_07310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JH290_07310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JH290_07315 PF01863 Protein of unknown function DUF45 JH290_07320 PF07043 Protein of unknown function (DUF1328) JH290_07330 PF01258 Prokaryotic dksA/traR C4-type zinc finger JH290_07350 PF08281 Sigma-70, region 4 JH290_07350 PF04542 Sigma-70 region 2 JH290_07375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH290_07385 PF08274 PhnA Zinc-Ribbon JH290_07385 PF03831 PhnA domain JH290_07405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JH290_07410 PF07690 Major Facilitator Superfamily JH290_07445 PF09924 Uncharacterised conserved protein (DUF2156) JH290_07445 PF03706 Lysylphosphatidylglycerol synthase TM region JH290_07455 PF01042 Endoribonuclease L-PSP JH290_07500 PF04542 Sigma-70 region 2 JH290_07500 PF04545 Sigma-70, region 4 JH290_07515 PF04060 Putative Fe-S cluster JH290_07525 PF09334 tRNA synthetases class I (M) JH290_07525 PF01588 Putative tRNA binding domain JH290_07535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH290_07540 PF00324 Amino acid permease JH290_07545 PF02574 Homocysteine S-methyltransferase JH290_07555 PF02592 Putative vitamin uptake transporter JH290_07580 PF03551 Transcriptional regulator PadR-like family JH290_07600 PF03653 Uncharacterised protein family (UPF0093) JH290_07610 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JH290_07615 PF07733 Bacterial DNA polymerase III alpha NTPase domain JH290_07615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JH290_07615 PF14579 Helix-hairpin-helix motif JH290_07615 PF02811 PHP domain JH290_07615 PF01336 OB-fold nucleic acid binding domain JH290_07620 PF01351 Ribonuclease HII JH290_07625 PF02684 Lipid-A-disaccharide synthetase JH290_07630 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JH290_07630 PF00132 Bacterial transferase hexapeptide (six repeats) JH290_07635 PF07977 FabA-like domain JH290_07640 PF00132 Bacterial transferase hexapeptide (six repeats) JH290_07640 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JH290_07650 PF07244 Surface antigen variable number repeat JH290_07650 PF01103 Surface antigen JH290_07655 PF02163 Peptidase family M50 JH290_07655 PF17820 PDZ domain JH290_07660 PF13288 DXP reductoisomerase C-terminal domain JH290_07660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JH290_07660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JH290_07670 PF01255 Putative undecaprenyl diphosphate synthase JH290_07675 PF01765 Ribosome recycling factor JH290_07680 PF00696 Amino acid kinase family JH290_07685 PF00990 Diguanylate cyclase, GGDEF domain JH290_07685 PF00072 Response regulator receiver domain JH290_07690 PF00889 Elongation factor TS JH290_07695 PF00318 Ribosomal protein S2 JH290_07710 PF05229 Spore Coat Protein U domain JH290_07730 PF00557 Metallopeptidase family M24 JH290_07735 PF08335 GlnD PII-uridylyltransferase JH290_07735 PF01966 HD domain JH290_07735 PF01909 Nucleotidyltransferase domain JH290_07740 PF00132 Bacterial transferase hexapeptide (six repeats) JH290_07740 PF14602 Hexapeptide repeat of succinyl-transferase JH290_07740 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JH290_07750 PF03960 ArsC family JH290_07755 PF07687 Peptidase dimerisation domain JH290_07755 PF01546 Peptidase family M20/M25/M40 JH290_07765 PF13537 Glutamine amidotransferase domain JH290_07765 PF00733 Asparagine synthase JH290_07775 PF07715 TonB-dependent Receptor Plug Domain JH290_07775 PF00593 TonB dependent receptor JH290_07780 PF01804 Penicillin amidase JH290_07785 PF00210 Ferritin-like domain JH290_07790 PF05724 Thiopurine S-methyltransferase (TPMT) JH290_07795 PF00521 DNA gyrase/topoisomerase IV, subunit A JH290_07795 PF03989 DNA gyrase C-terminal domain, beta-propeller JH290_07810 PF02321 Outer membrane efflux protein JH290_07815 PF00529 HlyD membrane-fusion protein of T1SS JH290_07815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_07820 PF07690 Major Facilitator Superfamily JH290_07845 PF00664 ABC transporter transmembrane region JH290_07845 PF00005 ABC transporter JH290_07845 PF03412 Peptidase C39 family JH290_07875 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_07875 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_07875 PF14310 Fibronectin type III-like domain JH290_07885 PF00854 POT family JH290_07920 PF01432 Peptidase family M3 JH290_07925 PF00255 Glutathione peroxidase JH290_07930 PF00970 Oxidoreductase FAD-binding domain JH290_07930 PF00175 Oxidoreductase NAD-binding domain JH290_07935 PF00005 ABC transporter JH290_07940 PF05681 Fumarate hydratase (Fumerase) JH290_07940 PF05683 Fumarase C-terminus JH290_07955 PF00484 Carbonic anhydrase JH290_07960 PF02253 Phospholipase A1 JH290_07970 PF00313 'Cold-shock' DNA-binding domain JH290_07985 PF00899 ThiF family JH290_07990 PF01026 TatD related DNase JH290_08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_08005 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_08015 PF00043 Glutathione S-transferase, C-terminal domain JH290_08015 PF02798 Glutathione S-transferase, N-terminal domain JH290_08020 PF13537 Glutamine amidotransferase domain JH290_08020 PF00733 Asparagine synthase JH290_08025 PF03358 NADPH-dependent FMN reductase JH290_08030 PF03796 DnaB-like helicase C terminal domain JH290_08030 PF00772 DnaB-like helicase N terminal domain JH290_08035 PF00875 DNA photolyase JH290_08035 PF03441 FAD binding domain of DNA photolyase JH290_08040 PF05736 OprF membrane domain JH290_08040 PF00691 OmpA family JH290_08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_08045 PF03466 LysR substrate binding domain JH290_08055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_08055 PF00529 HlyD membrane-fusion protein of T1SS JH290_08060 PF00873 AcrB/AcrD/AcrF family JH290_08070 PF02321 Outer membrane efflux protein JH290_08075 PF00990 Diguanylate cyclase, GGDEF domain JH290_08085 PF00990 Diguanylate cyclase, GGDEF domain JH290_08105 PF00082 Subtilase family JH290_08110 PF01668 SmpB protein JH290_08120 PF03658 RnfH family Ubiquitin JH290_08125 PF04355 SmpA / OmlA family JH290_08130 PF01475 Ferric uptake regulator family JH290_08135 PF02463 RecF/RecN/SMC N terminal domain JH290_08140 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JH290_08140 PF01628 HrcA protein C terminal domain JH290_08145 PF01025 GrpE JH290_08150 PF00012 Hsp70 protein JH290_08155 PF00226 DnaJ domain JH290_08155 PF01556 DnaJ C terminal domain JH290_08155 PF00684 DnaJ central domain JH290_08160 PF08543 Phosphomethylpyrimidine kinase JH290_08185 PF00664 ABC transporter transmembrane region JH290_08185 PF03412 Peptidase C39 family JH290_08185 PF00005 ABC transporter JH290_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_08190 PF03466 LysR substrate binding domain JH290_08195 PF00005 ABC transporter JH290_08195 PF00664 ABC transporter transmembrane region JH290_08200 PF01205 Uncharacterized protein family UPF0029 JH290_08205 PF03641 Possible lysine decarboxylase JH290_08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_08210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH290_08215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JH290_08215 PF00364 Biotin-requiring enzyme JH290_08215 PF02817 e3 binding domain JH290_08220 PF00676 Dehydrogenase E1 component JH290_08220 PF02779 Transketolase, pyrimidine binding domain JH290_08220 PF16870 2-oxoglutarate dehydrogenase C-terminal JH290_08220 PF16078 2-oxoglutarate dehydrogenase N-terminus JH290_08230 PF08007 Cupin superfamily protein JH290_08245 PF00206 Lyase JH290_08245 PF08328 Adenylosuccinate lyase C-terminal JH290_08250 PF01595 Cyclin M transmembrane N-terminal domain JH290_08250 PF00571 CBS domain JH290_08250 PF03471 Transporter associated domain JH290_08255 PF00206 Lyase JH290_08255 PF10415 Fumarase C C-terminus JH290_08280 PF00005 ABC transporter JH290_08285 PF00392 Bacterial regulatory proteins, gntR family JH290_08295 PF00255 Glutathione peroxidase JH290_08300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH290_08300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JH290_08305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JH290_08305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JH290_08305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JH290_08310 PF04102 SlyX JH290_08325 PF00356 Bacterial regulatory proteins, lacI family JH290_08330 PF07690 Major Facilitator Superfamily JH290_08335 PF00294 pfkB family carbohydrate kinase JH290_08345 PF02607 B12 binding domain JH290_08345 PF02310 B12 binding domain JH290_08345 PF02574 Homocysteine S-methyltransferase JH290_08345 PF00809 Pterin binding enzyme JH290_08345 PF02965 Vitamin B12 dependent methionine synthase, activation domain JH290_08350 PF02574 Homocysteine S-methyltransferase JH290_08350 PF00809 Pterin binding enzyme JH290_08355 PF01209 ubiE/COQ5 methyltransferase family JH290_08360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_08360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_08360 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_08375 PF08461 Ribonuclease R winged-helix domain JH290_08375 PF00575 S1 RNA binding domain JH290_08375 PF08206 Ribonuclease B OB domain JH290_08375 PF00773 RNB domain JH290_08375 PF17876 Cold shock domain JH290_08385 PF00588 SpoU rRNA Methylase family JH290_08385 PF08032 RNA 2'-O ribose methyltransferase substrate binding JH290_08390 PF00990 Diguanylate cyclase, GGDEF domain JH290_08395 PF00929 Exonuclease JH290_08405 PF01895 PhoU domain JH290_08410 PF00005 ABC transporter JH290_08415 PF00528 Binding-protein-dependent transport system inner membrane component JH290_08420 PF00528 Binding-protein-dependent transport system inner membrane component JH290_08425 PF12849 PBP superfamily domain JH290_08430 PF12849 PBP superfamily domain JH290_08445 PF00484 Carbonic anhydrase JH290_08450 PF01740 STAS domain JH290_08450 PF00916 Sulfate permease family JH290_08455 PF10576 Iron-sulfur binding domain of endonuclease III JH290_08455 PF00633 Helix-hairpin-helix motif JH290_08455 PF00730 HhH-GPD superfamily base excision DNA repair protein JH290_08465 PF00378 Enoyl-CoA hydratase/isomerase JH290_08470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH290_08470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JH290_08475 PF00293 NUDIX domain JH290_08480 PF00581 Rhodanese-like domain JH290_08515 PF00005 ABC transporter JH290_08515 PF16326 ABC transporter C-terminal domain JH290_08515 PF12848 ABC transporter JH290_08520 PF10672 S-adenosylmethionine-dependent methyltransferase JH290_08520 PF02926 THUMP domain JH290_08520 PF01170 Putative RNA methylase family UPF0020 JH290_08525 PF01513 ATP-NAD kinase JH290_08550 PF08411 Exonuclease C-terminal JH290_08550 PF00929 Exonuclease JH290_08555 PF01494 FAD binding domain JH290_08560 PF00266 Aminotransferase class-V JH290_08570 PF06052 3-hydroxyanthranilic acid dioxygenase JH290_08575 PF00484 Carbonic anhydrase JH290_08600 PF00152 tRNA synthetases class II (D, K and N) JH290_08600 PF01336 OB-fold nucleic acid binding domain JH290_08605 PF01521 Iron-sulphur cluster biosynthesis JH290_08610 PF01250 Ribosomal protein S6 JH290_08615 PF01084 Ribosomal protein S18 JH290_08620 PF03948 Ribosomal protein L9, C-terminal domain JH290_08620 PF01281 Ribosomal protein L9, N-terminal domain JH290_08630 PF02463 RecF/RecN/SMC N terminal domain JH290_08635 PF04354 ZipA, C-terminal FtsZ-binding domain JH290_08640 PF00155 Aminotransferase class I and II JH290_08645 PF00533 BRCA1 C Terminus (BRCT) domain JH290_08645 PF01653 NAD-dependent DNA ligase adenylation domain JH290_08645 PF03120 NAD-dependent DNA ligase OB-fold domain JH290_08645 PF12826 Helix-hairpin-helix motif JH290_08645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JH290_08650 PF00152 tRNA synthetases class II (D, K and N) JH290_08660 PF01008 Initiation factor 2 subunit family JH290_08665 PF03989 DNA gyrase C-terminal domain, beta-propeller JH290_08665 PF00521 DNA gyrase/topoisomerase IV, subunit A JH290_08670 PF13360 PQQ-like domain JH290_08680 PF01175 Urocanase Rossmann-like domain JH290_08680 PF17392 Urocanase C-terminal domain JH290_08680 PF17391 Urocanase N-terminal domain JH290_08690 PF00221 Aromatic amino acid lyase JH290_08695 PF01979 Amidohydrolase family JH290_08705 PF00392 Bacterial regulatory proteins, gntR family JH290_08705 PF07702 UTRA domain JH290_08730 PF01794 Ferric reductase like transmembrane component JH290_08735 PF00174 Oxidoreductase molybdopterin binding domain JH290_08740 PF00266 Aminotransferase class-V JH290_08745 PF00800 Prephenate dehydratase JH290_08745 PF01842 ACT domain JH290_08745 PF01817 Chorismate mutase type II JH290_08750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JH290_08755 PF03544 Gram-negative bacterial TonB protein C-terminal JH290_08760 PF03544 Gram-negative bacterial TonB protein C-terminal JH290_08765 PF02403 Seryl-tRNA synthetase N-terminal domain JH290_08765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH290_08770 PF03466 LysR substrate binding domain JH290_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_08865 PF04002 RadC-like JAB domain JH290_08905 PF01494 FAD binding domain JH290_08930 PF02585 GlcNAc-PI de-N-acetylase JH290_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_08975 PF00072 Response regulator receiver domain JH290_08975 PF13188 PAS domain JH290_08975 PF08448 PAS fold JH290_08975 PF00512 His Kinase A (phospho-acceptor) domain JH290_08980 PF02954 Bacterial regulatory protein, Fis family JH290_08980 PF00072 Response regulator receiver domain JH290_08980 PF00158 Sigma-54 interaction domain JH290_08985 PF06745 KaiC JH290_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_08990 PF13426 PAS domain JH290_08990 PF00072 Response regulator receiver domain JH290_09000 PF03918 Cytochrome C biogenesis protein JH290_09005 PF08534 Redoxin JH290_09010 PF01578 Cytochrome C assembly protein JH290_09010 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JH290_09015 PF03100 CcmE JH290_09020 PF04995 Heme exporter protein D (CcmD) JH290_09025 PF01578 Cytochrome C assembly protein JH290_09030 PF00082 Subtilase family JH290_09040 PF04542 Sigma-70 region 2 JH290_09040 PF08281 Sigma-70, region 4 JH290_09050 PF00034 Cytochrome c JH290_09060 PF01292 Prokaryotic cytochrome b561 JH290_09065 PF05523 WxcM-like, C-terminal JH290_09070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JH290_09075 PF01943 Polysaccharide biosynthesis protein JH290_09080 PF00535 Glycosyl transferase family 2 JH290_09100 PF13382 Adenine deaminase C-terminal domain JH290_09100 PF01979 Amidohydrolase family JH290_09110 PF00534 Glycosyl transferases group 1 JH290_09110 PF13439 Glycosyltransferase Family 4 JH290_09115 PF00534 Glycosyl transferases group 1 JH290_09115 PF13579 Glycosyl transferase 4-like domain JH290_09135 PF00005 ABC transporter JH290_09135 PF00664 ABC transporter transmembrane region JH290_09140 PF07690 Major Facilitator Superfamily JH290_09145 PF00296 Luciferase-like monooxygenase JH290_09160 PF00571 CBS domain JH290_09160 PF01595 Cyclin M transmembrane N-terminal domain JH290_09160 PF03471 Transporter associated domain JH290_09170 PF01384 Phosphate transporter family JH290_09185 PF02611 CDP-diacylglycerol pyrophosphatase JH290_09190 PF01751 Toprim domain JH290_09190 PF00204 DNA gyrase B JH290_09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_09190 PF00986 DNA gyrase B subunit, carboxyl terminus JH290_09200 PF00117 Glutamine amidotransferase class-I JH290_09200 PF06418 CTP synthase N-terminus JH290_09205 PF00793 DAHP synthetase I family JH290_09215 PF00113 Enolase, C-terminal TIM barrel domain JH290_09215 PF03952 Enolase, N-terminal domain JH290_09220 PF04977 Septum formation initiator JH290_09225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JH290_09230 PF02542 YgbB family JH290_09235 PF01142 tRNA pseudouridine synthase D (TruD) JH290_09245 PF01713 Smr domain JH290_09250 PF01975 Survival protein SurE JH290_09260 PF09335 SNARE associated Golgi protein JH290_09265 PF01551 Peptidase family M23 JH290_09265 PF01476 LysM domain JH290_09270 PF04430 Protein of unknown function (DUF498/DUF598) JH290_09275 PF01985 CRS1 / YhbY (CRM) domain JH290_09280 PF01728 FtsJ-like methyltransferase JH290_09285 PF01434 Peptidase family M41 JH290_09285 PF00004 ATPase family associated with various cellular activities (AAA) JH290_09285 PF06480 FtsH Extracellular JH290_09285 PF17862 AAA+ lid domain JH290_09290 PF00809 Pterin binding enzyme JH290_09300 PF17209 Hfq protein JH290_09305 PF16360 GTP-binding GTPase Middle Region JH290_09305 PF13167 GTP-binding GTPase N-terminal JH290_09305 PF01926 50S ribosome-binding GTPase JH290_09310 PF02464 Competence-damaged protein JH290_09320 PF07715 TonB-dependent Receptor Plug Domain JH290_09320 PF00593 TonB dependent receptor JH290_09325 PF03109 ABC1 family JH290_09330 PF01726 LexA DNA binding domain JH290_09330 PF00717 Peptidase S24-like JH290_09335 PF00154 recA bacterial DNA recombination protein JH290_09340 PF02631 RecX family JH290_09345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JH290_09345 PF02272 DHHA1 domain JH290_09345 PF01411 tRNA synthetases class II (A) JH290_09350 PF02599 Global regulator protein family JH290_09360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_09360 PF13426 PAS domain JH290_09360 PF08447 PAS fold JH290_09365 PF02678 Pirin JH290_09365 PF17954 Quercetinase C-terminal cupin domain JH290_09370 PF03466 LysR substrate binding domain JH290_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_09395 PF08543 Phosphomethylpyrimidine kinase JH290_09395 PF02581 Thiamine monophosphate synthase JH290_09405 PF13638 PIN domain JH290_09405 PF02562 PhoH-like protein JH290_09410 PF00578 AhpC/TSA family JH290_09425 PF00701 Dihydrodipicolinate synthetase family JH290_09435 PF00037 4Fe-4S binding domain JH290_09435 PF11953 Domain of unknown function (DUF3470) JH290_09440 PF05035 2-keto-3-deoxy-galactonokinase JH290_09445 PF08450 SMP-30/Gluconolactonase/LRE-like region JH290_09450 PF13378 Enolase C-terminal domain-like JH290_09450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JH290_09455 PF01081 KDPG and KHG aldolase JH290_09460 PF03466 LysR substrate binding domain JH290_09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_09475 PF00942 Cellulose binding domain JH290_09475 PF03442 Carbohydrate binding domain X2 JH290_09495 PF16338 Domain of unknown function (DUF4968) JH290_09495 PF17137 Domain of unknown function (DUF5110) JH290_09495 PF01055 Glycosyl hydrolases family 31 JH290_09505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH290_09505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH290_09515 PF00083 Sugar (and other) transporter JH290_09535 PF01520 N-acetylmuramoyl-L-alanine amidase JH290_09540 PF02649 Type I GTP cyclohydrolase folE2 JH290_09550 PF01743 Poly A polymerase head domain JH290_09550 PF12627 Probable RNA and SrmB- binding site of polymerase A JH290_09550 PF12626 Polymerase A arginine-rich C-terminus JH290_09555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JH290_09560 PF02548 Ketopantoate hydroxymethyltransferase JH290_09565 PF02569 Pantoate-beta-alanine ligase JH290_09570 PF02261 Aspartate decarboxylase JH290_09575 PF00342 Phosphoglucose isomerase JH290_09590 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_09590 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_09590 PF14310 Fibronectin type III-like domain JH290_09595 PF00474 Sodium:solute symporter family JH290_09600 PF00990 Diguanylate cyclase, GGDEF domain JH290_09600 PF00360 Phytochrome region JH290_09600 PF01590 GAF domain JH290_09600 PF00563 EAL domain JH290_09605 PF02013 Cellulose or protein binding domain JH290_09605 PF00150 Cellulase (glycosyl hydrolase family 5) JH290_09610 PF00072 Response regulator receiver domain JH290_09620 PF04551 GcpE protein JH290_09625 PF01569 PAP2 superfamily JH290_09630 PF07690 Major Facilitator Superfamily JH290_09635 PF01177 Asp/Glu/Hydantoin racemase JH290_09640 PF00892 EamA-like transporter family JH290_09645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JH290_09645 PF01565 FAD binding domain JH290_09650 PF01180 Dihydroorotate dehydrogenase JH290_09665 PF00171 Aldehyde dehydrogenase family JH290_09675 PF08479 POTRA domain, ShlB-type JH290_09675 PF17287 POTRA domain JH290_09675 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JH290_09685 PF01609 Transposase DDE domain JH290_09685 PF05598 Transposase domain (DUF772) JH290_09745 PF04829 Pre-toxin domain with VENN motif JH290_09745 PF13332 Hemagglutinin repeat JH290_09745 PF05594 Haemagluttinin repeat JH290_09775 PF03447 Homoserine dehydrogenase, NAD binding domain JH290_09775 PF00696 Amino acid kinase family JH290_09775 PF01842 ACT domain JH290_09775 PF13840 ACT domain JH290_09775 PF00742 Homoserine dehydrogenase JH290_09780 PF08544 GHMP kinases C terminal JH290_09780 PF00288 GHMP kinases N terminal domain JH290_09790 PF00291 Pyridoxal-phosphate dependent enzyme JH290_09790 PF14821 Threonine synthase N terminus JH290_09800 PF13545 Crp-like helix-turn-helix domain JH290_09800 PF00027 Cyclic nucleotide-binding domain JH290_09805 PF03129 Anticodon binding domain JH290_09805 PF13393 Histidyl-tRNA synthetase JH290_09815 PF01634 ATP phosphoribosyltransferase JH290_09815 PF08029 HisG, C-terminal domain JH290_09820 PF00815 Histidinol dehydrogenase JH290_09825 PF00155 Aminotransferase class I and II JH290_09830 PF00475 Imidazoleglycerol-phosphate dehydratase JH290_09835 PF00117 Glutamine amidotransferase class-I JH290_09840 PF00977 Histidine biosynthesis protein JH290_09845 PF00977 Histidine biosynthesis protein JH290_09850 PF01502 Phosphoribosyl-AMP cyclohydrolase JH290_09850 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JH290_09870 PF03079 ARD/ARD' family JH290_09875 PF00596 Class II Aldolase and Adducin N-terminal domain JH290_09880 PF13520 Amino acid permease JH290_09885 PF13520 Amino acid permease JH290_09900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH290_09900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH290_09900 PF01842 ACT domain JH290_09905 PF01565 FAD binding domain JH290_09905 PF02913 FAD linked oxidases, C-terminal domain JH290_09925 PF09285 Elongation factor P, C-terminal JH290_09925 PF01132 Elongation factor P (EF-P) OB domain JH290_09925 PF08207 Elongation factor P (EF-P) KOW-like domain JH290_09930 PF00106 short chain dehydrogenase JH290_09935 PF00682 HMGL-like JH290_09940 PF00378 Enoyl-CoA hydratase/isomerase JH290_09950 PF07670 Nucleoside recognition JH290_09950 PF07664 Ferrous iron transport protein B C terminus JH290_09950 PF02421 Ferrous iron transport protein B JH290_09965 PF00155 Aminotransferase class I and II JH290_09970 PF03475 3-alpha domain JH290_09970 PF03473 MOSC domain JH290_09975 PF05173 Dihydrodipicolinate reductase, C-terminus JH290_09975 PF01113 Dihydrodipicolinate reductase, N-terminus JH290_09980 PF00117 Glutamine amidotransferase class-I JH290_09980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JH290_09995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JH290_09995 PF02142 MGS-like domain JH290_09995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH290_10000 PF01272 Transcription elongation factor, GreA/GreB, C-term JH290_10000 PF03449 Transcription elongation factor, N-terminal JH290_10010 PF17768 RecJ OB domain JH290_10010 PF01368 DHH family JH290_10010 PF02272 DHHA1 domain JH290_10035 PF04397 LytTr DNA-binding domain JH290_10035 PF00072 Response regulator receiver domain JH290_10045 PF00152 tRNA synthetases class II (D, K and N) JH290_10045 PF01336 OB-fold nucleic acid binding domain JH290_10050 PF00072 Response regulator receiver domain JH290_10055 PF00072 Response regulator receiver domain JH290_10055 PF01627 Hpt domain JH290_10055 PF00512 His Kinase A (phospho-acceptor) domain JH290_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10060 PF00072 Response regulator receiver domain JH290_10060 PF01627 Hpt domain JH290_10060 PF00512 His Kinase A (phospho-acceptor) domain JH290_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10065 PF00378 Enoyl-CoA hydratase/isomerase JH290_10070 PF00501 AMP-binding enzyme JH290_10070 PF13193 AMP-binding enzyme C-terminal domain JH290_10080 PF00694 Aconitase C-terminal domain JH290_10080 PF00330 Aconitase family (aconitate hydratase) JH290_10095 PF00330 Aconitase family (aconitate hydratase) JH290_10095 PF11791 Aconitate B N-terminal domain JH290_10095 PF06434 Aconitate hydratase 2 N-terminus JH290_10100 PF00561 alpha/beta hydrolase fold JH290_10105 PF00990 Diguanylate cyclase, GGDEF domain JH290_10105 PF00563 EAL domain JH290_10105 PF03707 Bacterial signalling protein N terminal repeat JH290_10110 PF01339 CheB methylesterase JH290_10110 PF00072 Response regulator receiver domain JH290_10115 PF03975 CheD chemotactic sensory transduction JH290_10120 PF01739 CheR methyltransferase, SAM binding domain JH290_10120 PF03705 CheR methyltransferase, all-alpha domain JH290_10125 PF00672 HAMP domain JH290_10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10125 PF02203 Tar ligand binding domain homologue JH290_10135 PF01584 CheW-like domain JH290_10140 PF07317 Flagellar regulator YcgR JH290_10140 PF07238 PilZ domain JH290_10145 PF00672 HAMP domain JH290_10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10145 PF02203 Tar ligand binding domain homologue JH290_10155 PF00672 HAMP domain JH290_10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10155 PF02203 Tar ligand binding domain homologue JH290_10160 PF02203 Tar ligand binding domain homologue JH290_10160 PF00672 HAMP domain JH290_10160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10165 PF02203 Tar ligand binding domain homologue JH290_10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10165 PF00672 HAMP domain JH290_10170 PF00672 HAMP domain JH290_10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10170 PF02203 Tar ligand binding domain homologue JH290_10175 PF00672 HAMP domain JH290_10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10175 PF02203 Tar ligand binding domain homologue JH290_10180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10180 PF00672 HAMP domain JH290_10180 PF02203 Tar ligand binding domain homologue JH290_10190 PF00672 HAMP domain JH290_10190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10190 PF02203 Tar ligand binding domain homologue JH290_10195 PF01584 CheW-like domain JH290_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10195 PF01627 Hpt domain JH290_10195 PF09078 CheY binding JH290_10195 PF02895 Signal transducing histidine kinase, homodimeric domain JH290_10200 PF00072 Response regulator receiver domain JH290_10210 PF01584 CheW-like domain JH290_10215 PF13614 AAA domain JH290_10220 PF00691 OmpA family JH290_10220 PF13677 Membrane MotB of proton-channel complex MotA/MotB JH290_10225 PF01618 MotA/TolQ/ExbB proton channel family JH290_10230 PF01609 Transposase DDE domain JH290_10230 PF05598 Transposase domain (DUF772) JH290_10300 PF00072 Response regulator receiver domain JH290_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10300 PF02895 Signal transducing histidine kinase, homodimeric domain JH290_10300 PF01584 CheW-like domain JH290_10300 PF01627 Hpt domain JH290_10305 PF04344 Chemotaxis phosphatase, CheZ JH290_10310 PF00072 Response regulator receiver domain JH290_10315 PF04539 Sigma-70 region 3 JH290_10315 PF04545 Sigma-70, region 4 JH290_10315 PF04542 Sigma-70 region 2 JH290_10320 PF10609 NUBPL iron-transfer P-loop NTPase JH290_10325 PF00448 SRP54-type protein, GTPase domain JH290_10330 PF00771 FHIPEP family JH290_10335 PF01312 FlhB HrpN YscU SpaS Family JH290_10340 PF00563 EAL domain JH290_10340 PF03707 Bacterial signalling protein N terminal repeat JH290_10340 PF00990 Diguanylate cyclase, GGDEF domain JH290_10345 PF00990 Diguanylate cyclase, GGDEF domain JH290_10350 PF00990 Diguanylate cyclase, GGDEF domain JH290_10355 PF01311 Bacterial export proteins, family 1 JH290_10360 PF01313 Bacterial export proteins, family 3 JH290_10365 PF00813 FliP family JH290_10370 PF04347 Flagellar biosynthesis protein, FliO JH290_10375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JH290_10380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JH290_10380 PF02154 Flagellar motor switch protein FliM JH290_10400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH290_10400 PF18269 T3SS EscN ATPase C-terminal domain JH290_10410 PF01706 FliG C-terminal domain JH290_10410 PF14841 FliG middle domain JH290_10410 PF14842 FliG N-terminal domain JH290_10415 PF01514 Secretory protein of YscJ/FliF family JH290_10415 PF08345 Flagellar M-ring protein C-terminal JH290_10420 PF02049 Flagellar hook-basal body complex protein FliE JH290_10425 PF00535 Glycosyl transferase family 2 JH290_10445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JH290_10450 PF02954 Bacterial regulatory protein, Fis family JH290_10450 PF06490 Flagellar regulatory protein FleQ JH290_10450 PF00158 Sigma-54 interaction domain JH290_10455 PF00072 Response regulator receiver domain JH290_10455 PF01339 CheB methylesterase JH290_10460 PF04963 Sigma-54 factor, core binding domain JH290_10460 PF00309 Sigma-54 factor, Activator interacting domain (AID) JH290_10460 PF04552 Sigma-54, DNA binding domain JH290_10465 PF00196 Bacterial regulatory proteins, luxR family JH290_10465 PF00072 Response regulator receiver domain JH290_10480 PF02561 Flagellar protein FliS JH290_10485 PF07196 Flagellin hook IN motif JH290_10485 PF02465 Flagellar hook-associated protein 2 N-terminus JH290_10485 PF07195 Flagellar hook-associated protein 2 C-terminus JH290_10490 PF00669 Bacterial flagellin N-terminal helical region JH290_10490 PF00700 Bacterial flagellin C-terminal helical region JH290_10495 PF00669 Bacterial flagellin N-terminal helical region JH290_10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JH290_10500 PF07196 Flagellin hook IN motif JH290_10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JH290_10505 PF10135 Rod binding protein JH290_10510 PF02119 Flagellar P-ring protein JH290_10515 PF02107 Flagellar L-ring protein JH290_10520 PF00460 Flagella basal body rod protein JH290_10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JH290_10525 PF00460 Flagella basal body rod protein JH290_10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JH290_10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JH290_10530 PF07559 Flagellar basal body protein FlaE JH290_10530 PF00460 Flagella basal body rod protein JH290_10535 PF03963 Flagellar hook capping protein - N-terminal region JH290_10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JH290_10540 PF00460 Flagella basal body rod protein JH290_10550 PF01584 CheW-like domain JH290_10550 PF00072 Response regulator receiver domain JH290_10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10570 PF00512 His Kinase A (phospho-acceptor) domain JH290_10575 PF03707 Bacterial signalling protein N terminal repeat JH290_10575 PF00563 EAL domain JH290_10575 PF00990 Diguanylate cyclase, GGDEF domain JH290_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10580 PF07730 Histidine kinase JH290_10585 PF00563 EAL domain JH290_10585 PF03707 Bacterial signalling protein N terminal repeat JH290_10585 PF00990 Diguanylate cyclase, GGDEF domain JH290_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_10600 PF00672 HAMP domain JH290_10600 PF12729 Four helix bundle sensory module for signal transduction JH290_10605 PF04356 Protein of unknown function (DUF489) JH290_10615 PF00293 NUDIX domain JH290_10620 PF02617 ATP-dependent Clp protease adaptor protein ClpS JH290_10625 PF02861 Clp amino terminal domain, pathogenicity island component JH290_10625 PF00004 ATPase family associated with various cellular activities (AAA) JH290_10625 PF07724 AAA domain (Cdc48 subfamily) JH290_10625 PF17871 AAA lid domain JH290_10625 PF10431 C-terminal, D2-small domain, of ClpB protein JH290_10630 PF01176 Translation initiation factor 1A / IF-1 JH290_10635 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JH290_10645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_10650 PF17854 FtsK alpha domain JH290_10650 PF09397 Ftsk gamma domain JH290_10650 PF01580 FtsK/SpoIIIE family JH290_10650 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JH290_10660 PF03548 Outer membrane lipoprotein carrier protein LolA JH290_10675 PF00004 ATPase family associated with various cellular activities (AAA) JH290_10675 PF12002 MgsA AAA+ ATPase C terminal JH290_10675 PF16193 AAA C-terminal domain JH290_10680 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JH290_10685 PF02803 Thiolase, C-terminal domain JH290_10685 PF00108 Thiolase, N-terminal domain JH290_10690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JH290_10690 PF00378 Enoyl-CoA hydratase/isomerase JH290_10690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JH290_10700 PF00334 Nucleoside diphosphate kinase JH290_10705 PF04055 Radical SAM superfamily JH290_10715 PF13464 Domain of unknown function (DUF4115) JH290_10725 PF13360 PQQ-like domain JH290_10725 PF01011 PQQ enzyme repeat JH290_10730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JH290_10730 PF01926 50S ribosome-binding GTPase JH290_10735 PF00994 Probable molybdopterin binding domain JH290_10735 PF03454 MoeA C-terminal region (domain IV) JH290_10735 PF03453 MoeA N-terminal region (domain I and II) JH290_10740 PF00899 ThiF family JH290_10755 PF00106 short chain dehydrogenase JH290_10775 PF08240 Alcohol dehydrogenase GroES-like domain JH290_10775 PF13823 Alcohol dehydrogenase GroES-associated JH290_10775 PF00107 Zinc-binding dehydrogenase JH290_10785 PF03372 Endonuclease/Exonuclease/phosphatase family JH290_10795 PF00994 Probable molybdopterin binding domain JH290_10795 PF03454 MoeA C-terminal region (domain IV) JH290_10795 PF03453 MoeA N-terminal region (domain I and II) JH290_10800 PF12804 MobA-like NTP transferase domain JH290_10810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JH290_10810 PF14824 Sirohaem biosynthesis protein central JH290_10810 PF10414 Sirohaem synthase dimerisation region JH290_10815 PF03861 ANTAR domain JH290_10815 PF00072 Response regulator receiver domain JH290_10825 PF07690 Major Facilitator Superfamily JH290_10830 PF18267 Rubredoxin NAD+ reductase C-terminal domain JH290_10830 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_10830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JH290_10830 PF04324 BFD-like [2Fe-2S] binding domain JH290_10830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JH290_10835 PF11723 Homotrimeric ring hydroxylase JH290_10835 PF00355 Rieske [2Fe-2S] domain JH290_10840 PF04324 BFD-like [2Fe-2S] binding domain JH290_10840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JH290_10840 PF00384 Molybdopterin oxidoreductase JH290_10840 PF01568 Molydopterin dinucleotide binding domain JH290_10845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JH290_10860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JH290_10870 PF00483 Nucleotidyl transferase JH290_10880 PF01266 FAD dependent oxidoreductase JH290_10895 PF05974 Domain of unknown function (DUF892) JH290_10900 PF01339 CheB methylesterase JH290_10900 PF00072 Response regulator receiver domain JH290_10915 PF00563 EAL domain JH290_10915 PF00990 Diguanylate cyclase, GGDEF domain JH290_10915 PF08447 PAS fold JH290_10915 PF08448 PAS fold JH290_10920 PF12951 Passenger-associated-transport-repeat JH290_10920 PF12951 Passenger-associated-transport-repeat JH290_10925 PF00082 Subtilase family JH290_10925 PF03797 Autotransporter beta-domain JH290_10955 PF00512 His Kinase A (phospho-acceptor) domain JH290_10955 PF08446 PAS fold JH290_10955 PF00360 Phytochrome region JH290_10955 PF01590 GAF domain JH290_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_10965 PF07995 Glucose / Sorbosone dehydrogenase JH290_10970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH290_10985 PF05649 Peptidase family M13 JH290_10985 PF01431 Peptidase family M13 JH290_11000 PF02630 SCO1/SenC JH290_11020 PF01638 HxlR-like helix-turn-helix JH290_11050 PF09335 SNARE associated Golgi protein JH290_11055 PF07715 TonB-dependent Receptor Plug Domain JH290_11055 PF07660 Secretin and TonB N terminus short domain JH290_11055 PF00593 TonB dependent receptor JH290_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_11060 PF02203 Tar ligand binding domain homologue JH290_11060 PF00672 HAMP domain JH290_11090 PF03377 TAL effector repeat JH290_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_11120 PF00072 Response regulator receiver domain JH290_11120 PF13426 PAS domain JH290_11125 PF08448 PAS fold JH290_11125 PF00512 His Kinase A (phospho-acceptor) domain JH290_11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_11125 PF13188 PAS domain JH290_11125 PF00072 Response regulator receiver domain JH290_11130 PF10091 Putative glucoamylase JH290_11130 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JH290_11130 PF06165 Glycosyltransferase family 36 JH290_11155 PF01106 NifU-like domain JH290_11160 PF01329 Pterin 4 alpha carbinolamine dehydratase JH290_11170 PF02535 ZIP Zinc transporter JH290_11175 PF00849 RNA pseudouridylate synthase JH290_11175 PF01479 S4 domain JH290_11180 PF12111 Polyribonucleotide phosphorylase C terminal JH290_11180 PF10150 Ribonuclease E/G family JH290_11180 PF00575 S1 RNA binding domain JH290_11185 PF00072 Response regulator receiver domain JH290_11185 PF00196 Bacterial regulatory proteins, luxR family JH290_11190 PF00581 Rhodanese-like domain JH290_11190 PF17773 UPF0176 acylphosphatase like domain JH290_11200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH290_11210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JH290_11210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JH290_11210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JH290_11240 PF01066 CDP-alcohol phosphatidyltransferase JH290_11245 PF08459 UvrC Helix-hairpin-helix N-terminal JH290_11245 PF02151 UvrB/uvrC motif JH290_11245 PF01541 GIY-YIG catalytic domain JH290_11255 PF01451 Low molecular weight phosphotyrosine protein phosphatase JH290_11260 PF02348 Cytidylyltransferase JH290_11265 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JH290_11270 PF00005 ABC transporter JH290_11270 PF00664 ABC transporter transmembrane region JH290_11275 PF02472 Biopolymer transport protein ExbD/TolR JH290_11280 PF01618 MotA/TolQ/ExbB proton channel family JH290_11285 PF03772 Competence protein JH290_11285 PF00753 Metallo-beta-lactamase superfamily JH290_11295 PF00005 ABC transporter JH290_11300 PF02687 FtsX-like permease family JH290_11300 PF12704 MacB-like periplasmic core domain JH290_11310 PF03937 Flavinator of succinate dehydrogenase JH290_11315 PF13085 2Fe-2S iron-sulfur cluster binding domain JH290_11325 PF02910 Fumarate reductase flavoprotein C-term JH290_11325 PF00890 FAD binding domain JH290_11330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JH290_11335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JH290_11350 PF00005 ABC transporter JH290_11350 PF17912 MalK OB fold domain JH290_11355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JH290_11355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JH290_11360 PF02685 Glucokinase JH290_11365 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JH290_11370 PF00920 Dehydratase family JH290_11375 PF01081 KDPG and KHG aldolase JH290_11380 PF00873 AcrB/AcrD/AcrF family JH290_11385 PF00873 AcrB/AcrD/AcrF family JH290_11390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_11400 PF00034 Cytochrome c JH290_11460 PF00589 Phage integrase family JH290_11460 PF13356 Arm DNA-binding domain JH290_11475 PF08448 PAS fold JH290_11475 PF08447 PAS fold JH290_11475 PF00990 Diguanylate cyclase, GGDEF domain JH290_11475 PF00563 EAL domain JH290_11480 PF09371 Tex-like protein N-terminal domain JH290_11480 PF16921 Tex protein YqgF-like domain JH290_11480 PF17674 HHH domain JH290_11480 PF00575 S1 RNA binding domain JH290_11505 PF00561 alpha/beta hydrolase fold JH290_11515 PF01066 CDP-alcohol phosphatidyltransferase JH290_11535 PF03618 Kinase/pyrophosphorylase JH290_11540 PF00391 PEP-utilising enzyme, mobile domain JH290_11540 PF02896 PEP-utilising enzyme, TIM barrel domain JH290_11540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JH290_11545 PF00924 Mechanosensitive ion channel JH290_11545 PF05552 Conserved TM helix JH290_11550 PF00929 Exonuclease JH290_11555 PF14437 MafB19-like deaminase JH290_11560 PF02742 Iron dependent repressor, metal binding and dimerisation domain JH290_11560 PF01325 Iron dependent repressor, N-terminal DNA binding domain JH290_11565 PF01566 Natural resistance-associated macrophage protein JH290_11570 PF00561 alpha/beta hydrolase fold JH290_11575 PF05977 Transmembrane secretion effector JH290_11580 PF07969 Amidohydrolase family JH290_11590 PF00857 Isochorismatase family JH290_11600 PF13185 GAF domain JH290_11600 PF13492 GAF domain JH290_11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_11600 PF07730 Histidine kinase JH290_11605 PF00196 Bacterial regulatory proteins, luxR family JH290_11605 PF00072 Response regulator receiver domain JH290_11620 PF00117 Glutamine amidotransferase class-I JH290_11620 PF00958 GMP synthase C terminal domain JH290_11620 PF02540 NAD synthase JH290_11625 PF00478 IMP dehydrogenase / GMP reductase domain JH290_11625 PF00571 CBS domain JH290_11630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JH290_11630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JH290_11645 PF00483 Nucleotidyl transferase JH290_11650 PF02719 Polysaccharide biosynthesis protein JH290_11655 PF00953 Glycosyl transferase family 4 JH290_11660 PF18073 Rubredoxin metal binding domain JH290_11670 PF00216 Bacterial DNA-binding protein JH290_11675 PF00575 S1 RNA binding domain JH290_11680 PF02224 Cytidylate kinase JH290_11685 PF00444 Ribosomal protein L36 JH290_11695 PF04371 Porphyromonas-type peptidyl-arginine deiminase JH290_11700 PF00795 Carbon-nitrogen hydrolase JH290_11725 PF00528 Binding-protein-dependent transport system inner membrane component JH290_11730 PF00528 Binding-protein-dependent transport system inner membrane component JH290_11735 PF13416 Bacterial extracellular solute-binding protein JH290_11750 PF00356 Bacterial regulatory proteins, lacI family JH290_11760 PF03795 YCII-related domain JH290_11765 PF02616 Segregation and condensation protein ScpA JH290_11770 PF04079 Segregation and condensation complex subunit ScpB JH290_11775 PF00849 RNA pseudouridylate synthase JH290_11775 PF01479 S4 domain JH290_11790 PF00795 Carbon-nitrogen hydrolase JH290_11795 PF00155 Aminotransferase class I and II JH290_11800 PF00005 ABC transporter JH290_11805 PF03379 CcmB protein JH290_11810 PF01578 Cytochrome C assembly protein JH290_11820 PF03100 CcmE JH290_11825 PF01578 Cytochrome C assembly protein JH290_11825 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JH290_11830 PF08534 Redoxin JH290_11835 PF03918 Cytochrome C biogenesis protein JH290_11845 PF00561 alpha/beta hydrolase fold JH290_11855 PF00664 ABC transporter transmembrane region JH290_11855 PF00005 ABC transporter JH290_11860 PF00664 ABC transporter transmembrane region JH290_11860 PF00005 ABC transporter JH290_11865 PF01654 Cytochrome bd terminal oxidase subunit I JH290_11870 PF02322 Cytochrome bd terminal oxidase subunit II JH290_11890 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JH290_11890 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JH290_11905 PF00171 Aldehyde dehydrogenase family JH290_11910 PF00696 Amino acid kinase family JH290_11910 PF01472 PUA domain JH290_11925 PF00206 Lyase JH290_11930 PF01118 Semialdehyde dehydrogenase, NAD binding domain JH290_11940 PF00696 Amino acid kinase family JH290_11940 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase JH290_11945 PF01546 Peptidase family M20/M25/M40 JH290_11945 PF07687 Peptidase dimerisation domain JH290_11950 PF00764 Arginosuccinate synthase JH290_11960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JH290_11960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JH290_11970 PF09190 DALR domain JH290_11970 PF01406 tRNA synthetases class I (C) catalytic domain JH290_11975 PF02657 Fe-S metabolism associated domain JH290_11980 PF07690 Major Facilitator Superfamily JH290_11990 PF01258 Prokaryotic dksA/traR C4-type zinc finger JH290_12000 PF01979 Amidohydrolase family JH290_12005 PF01551 Peptidase family M23 JH290_12005 PF08460 Bacterial SH3 domain JH290_12015 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JH290_12020 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JH290_12030 PF00753 Metallo-beta-lactamase superfamily JH290_12050 PF00295 Glycosyl hydrolases family 28 JH290_12060 PF13419 Haloacid dehalogenase-like hydrolase JH290_12070 PF01979 Amidohydrolase family JH290_12080 PF09285 Elongation factor P, C-terminal JH290_12080 PF08207 Elongation factor P (EF-P) KOW-like domain JH290_12080 PF01132 Elongation factor P (EF-P) OB domain JH290_12085 PF04055 Radical SAM superfamily JH290_12090 PF03707 Bacterial signalling protein N terminal repeat JH290_12090 PF00990 Diguanylate cyclase, GGDEF domain JH290_12090 PF00563 EAL domain JH290_12090 PF13188 PAS domain JH290_12100 PF00588 SpoU rRNA Methylase family JH290_12105 PF00459 Inositol monophosphatase family JH290_12110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JH290_12110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JH290_12115 PF00545 ribonuclease JH290_12125 PF16326 ABC transporter C-terminal domain JH290_12125 PF00005 ABC transporter JH290_12125 PF12848 ABC transporter JH290_12130 PF00271 Helicase conserved C-terminal domain JH290_12130 PF03880 DbpA RNA binding domain JH290_12130 PF00270 DEAD/DEAH box helicase JH290_12135 PF00156 Phosphoribosyl transferase domain JH290_12140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JH290_12145 PF07859 alpha/beta hydrolase fold JH290_12155 PF00313 'Cold-shock' DNA-binding domain JH290_12160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JH290_12165 PF07152 YaeQ protein JH290_12175 PF00563 EAL domain JH290_12175 PF00990 Diguanylate cyclase, GGDEF domain JH290_12175 PF03707 Bacterial signalling protein N terminal repeat JH290_12180 PF01435 Peptidase family M48 JH290_12185 PF00749 tRNA synthetases class I (E and Q), catalytic domain JH290_12190 PF00106 short chain dehydrogenase JH290_12195 PF05233 PHB accumulation regulatory domain JH290_12195 PF07879 PHB/PHA accumulation regulator DNA-binding domain JH290_12210 PF01119 DNA mismatch repair protein, C-terminal domain JH290_12210 PF08676 MutL C terminal dimerisation domain JH290_12215 PF01520 N-acetylmuramoyl-L-alanine amidase JH290_12215 PF11741 AMIN domain JH290_12225 PF01256 Carbohydrate kinase JH290_12225 PF03853 YjeF-related protein N-terminus JH290_12230 PF08331 Domain of unknown function (DUF1730) JH290_12235 PF02601 Exonuclease VII, large subunit JH290_12235 PF13742 OB-fold nucleic acid binding domain JH290_12245 PF03781 Sulfatase-modifying factor enzyme 1 JH290_12250 PF00570 HRDC domain JH290_12250 PF01612 3'-5' exonuclease JH290_12255 PF01068 ATP dependent DNA ligase domain JH290_12255 PF13298 DNA polymerase Ligase (LigD) JH290_12255 PF04679 ATP dependent DNA ligase C terminal region JH290_12295 PF01584 CheW-like domain JH290_12300 PF00672 HAMP domain JH290_12300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_12300 PF02203 Tar ligand binding domain homologue JH290_12305 PF02245 Methylpurine-DNA glycosylase (MPG) JH290_12310 PF08494 DEAD/H associated JH290_12310 PF00270 DEAD/DEAH box helicase JH290_12310 PF00271 Helicase conserved C-terminal domain JH290_12325 PF04386 Stringent starvation protein B JH290_12330 PF02798 Glutathione S-transferase, N-terminal domain JH290_12330 PF00043 Glutathione S-transferase, C-terminal domain JH290_12335 PF02167 Cytochrome C1 family JH290_12340 PF00032 Cytochrome b(C-terminal)/b6/petD JH290_12340 PF00033 Cytochrome b/b6/petB JH290_12345 PF00355 Rieske [2Fe-2S] domain JH290_12345 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JH290_12350 PF01464 Transglycosylase SLT domain JH290_12360 PF02798 Glutathione S-transferase, N-terminal domain JH290_12360 PF14497 Glutathione S-transferase, C-terminal domain JH290_12365 PF04055 Radical SAM superfamily JH290_12365 PF01938 TRAM domain JH290_12365 PF00919 Uncharacterized protein family UPF0004 JH290_12370 PF02562 PhoH-like protein JH290_12380 PF02130 Uncharacterized protein family UPF0054 JH290_12390 PF00571 CBS domain JH290_12390 PF03471 Transporter associated domain JH290_12405 PF00171 Aldehyde dehydrogenase family JH290_12415 PF00528 Binding-protein-dependent transport system inner membrane component JH290_12420 PF00528 Binding-protein-dependent transport system inner membrane component JH290_12430 PF00005 ABC transporter JH290_12430 PF08402 TOBE domain JH290_12435 PF02321 Outer membrane efflux protein JH290_12440 PF07690 Major Facilitator Superfamily JH290_12445 PF13533 Biotin-lipoyl like JH290_12450 PF13416 Bacterial extracellular solute-binding protein JH290_12455 PF00202 Aminotransferase class-III JH290_12460 PF00120 Glutamine synthetase, catalytic domain JH290_12465 PF07722 Peptidase C26 JH290_12470 PF00120 Glutamine synthetase, catalytic domain JH290_12475 PF01266 FAD dependent oxidoreductase JH290_12480 PF00990 Diguanylate cyclase, GGDEF domain JH290_12480 PF00072 Response regulator receiver domain JH290_12485 PF01814 Hemerythrin HHE cation binding domain JH290_12490 PF00083 Sugar (and other) transporter JH290_12490 PF07690 Major Facilitator Superfamily JH290_12500 PF00384 Molybdopterin oxidoreductase JH290_12505 PF02634 FdhD/NarQ family JH290_12510 PF07690 Major Facilitator Superfamily JH290_12515 PF00202 Aminotransferase class-III JH290_12525 PF04286 Protein of unknown function (DUF445) JH290_12530 PF00672 HAMP domain JH290_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_12530 PF00512 His Kinase A (phospho-acceptor) domain JH290_12530 PF01627 Hpt domain JH290_12530 PF00072 Response regulator receiver domain JH290_12530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JH290_12535 PF00072 Response regulator receiver domain JH290_12540 PF07690 Major Facilitator Superfamily JH290_12560 PF05088 Bacterial NAD-glutamate dehydrogenase JH290_12570 PF00529 HlyD membrane-fusion protein of T1SS JH290_12570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_12575 PF00873 AcrB/AcrD/AcrF family JH290_12580 PF00356 Bacterial regulatory proteins, lacI family JH290_12585 PF05524 PEP-utilising enzyme, N-terminal JH290_12585 PF00391 PEP-utilising enzyme, mobile domain JH290_12585 PF02896 PEP-utilising enzyme, TIM barrel domain JH290_12585 PF00381 PTS HPr component phosphorylation site JH290_12585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH290_12590 PF00294 pfkB family carbohydrate kinase JH290_12595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH290_12655 PF07549 SecD/SecF GG Motif JH290_12655 PF02355 Protein export membrane protein JH290_12660 PF02355 Protein export membrane protein JH290_12660 PF13721 SecD export protein N-terminal TM region JH290_12660 PF07549 SecD/SecF GG Motif JH290_12665 PF02699 Preprotein translocase subunit JH290_12670 PF01702 Queuine tRNA-ribosyltransferase JH290_12675 PF02547 Queuosine biosynthesis protein JH290_12685 PF00202 Aminotransferase class-III JH290_12715 PF02927 Cellulase N-terminal ig-like domain JH290_12715 PF00759 Glycosyl hydrolase family 9 JH290_12725 PF00037 4Fe-4S binding domain JH290_12740 PF01467 Cytidylyltransferase-like JH290_12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_12750 PF00183 Hsp90 protein JH290_12785 PF07715 TonB-dependent Receptor Plug Domain JH290_12785 PF00593 TonB dependent receptor JH290_12825 PF13520 Amino acid permease JH290_12850 PF01321 Creatinase/Prolidase N-terminal domain JH290_12850 PF00557 Metallopeptidase family M24 JH290_12855 PF00171 Aldehyde dehydrogenase family JH290_12860 PF00701 Dihydrodipicolinate synthetase family JH290_12865 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_12865 PF04324 BFD-like [2Fe-2S] binding domain JH290_12875 PF01266 FAD dependent oxidoreductase JH290_12880 PF05544 Proline racemase JH290_12890 PF02881 SRP54-type protein, helical bundle domain JH290_12890 PF00448 SRP54-type protein, GTPase domain JH290_12895 PF00633 Helix-hairpin-helix motif JH290_12895 PF00730 HhH-GPD superfamily base excision DNA repair protein JH290_12895 PF14815 NUDIX domain JH290_12900 PF04362 Bacterial Fe(2+) trafficking JH290_12910 PF00072 Response regulator receiver domain JH290_12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_12910 PF13426 PAS domain JH290_12915 PF00893 Small Multidrug Resistance protein JH290_12935 PF00512 His Kinase A (phospho-acceptor) domain JH290_12935 PF13188 PAS domain JH290_12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_12935 PF08448 PAS fold JH290_12935 PF00072 Response regulator receiver domain JH290_12965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_12965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_12965 PF12806 Acetyl-CoA dehydrogenase C-terminal like JH290_12965 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_12975 PF02779 Transketolase, pyrimidine binding domain JH290_12975 PF02780 Transketolase, C-terminal domain JH290_12975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JH290_12995 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JH290_13005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JH290_13005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JH290_13020 PF03808 Glycosyl transferase WecB/TagA/CpsF family JH290_13035 PF01943 Polysaccharide biosynthesis protein JH290_13045 PF13439 Glycosyltransferase Family 4 JH290_13045 PF00534 Glycosyl transferases group 1 JH290_13065 PF02397 Bacterial sugar transferase JH290_13085 PF13411 MerR HTH family regulatory protein JH290_13090 PF00216 Bacterial DNA-binding protein JH290_13095 PF03483 B3/4 domain JH290_13095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JH290_13095 PF01588 Putative tRNA binding domain JH290_13095 PF03147 Ferredoxin-fold anticodon binding domain JH290_13095 PF03484 tRNA synthetase B5 domain JH290_13100 PF01409 tRNA synthetases class II core domain (F) JH290_13100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JH290_13105 PF00453 Ribosomal protein L20 JH290_13110 PF01632 Ribosomal protein L35 JH290_13115 PF00707 Translation initiation factor IF-3, C-terminal domain JH290_13115 PF05198 Translation initiation factor IF-3, N-terminal domain JH290_13120 PF03129 Anticodon binding domain JH290_13120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JH290_13120 PF02824 TGS domain JH290_13120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH290_13125 PF00356 Bacterial regulatory proteins, lacI family JH290_13130 PF05598 Transposase domain (DUF772) JH290_13130 PF01609 Transposase DDE domain JH290_13135 PF00128 Alpha amylase, catalytic domain JH290_13135 PF00686 Starch binding domain JH290_13140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH290_13150 PF10566 Glycoside hydrolase 97 JH290_13150 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JH290_13150 PF14508 Glycosyl-hydrolase 97 N-terminal JH290_13165 PF00128 Alpha amylase, catalytic domain JH290_13220 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JH290_13225 PF05101 Type IV secretory pathway, VirB3-like protein JH290_13230 PF04956 TrbC/VIRB2 family JH290_13235 PF01464 Transglycosylase SLT domain JH290_13240 PF00437 Type II/IV secretion system protein JH290_13245 PF03743 Bacterial conjugation TrbI-like protein JH290_13255 PF04335 VirB8 protein JH290_13265 PF02534 Type IV secretory system Conjugative DNA transfer JH290_13280 PF00271 Helicase conserved C-terminal domain JH290_13280 PF04851 Type III restriction enzyme, res subunit JH290_13280 PF02151 UvrB/uvrC motif JH290_13280 PF12344 Ultra-violet resistance protein B JH290_13280 PF17757 UvrB interaction domain JH290_13285 PF00114 Pilin (bacterial filament) JH290_13285 PF07963 Prokaryotic N-terminal methylation motif JH290_13300 PF05567 Neisseria PilC beta-propeller domain JH290_13320 PF07963 Prokaryotic N-terminal methylation motif JH290_13320 PF00114 Pilin (bacterial filament) JH290_13325 PF11892 Domain of unknown function (DUF3412) JH290_13325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JH290_13325 PF03641 Possible lysine decarboxylase JH290_13330 PF00593 TonB dependent receptor JH290_13335 PF01914 MarC family integral membrane protein JH290_13345 PF00462 Glutaredoxin JH290_13350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JH290_13350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JH290_13355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JH290_13355 PF02222 ATP-grasp domain JH290_13360 PF00731 AIR carboxylase JH290_13370 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JH290_13370 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JH290_13380 PF03725 3' exoribonuclease family, domain 2 JH290_13380 PF00575 S1 RNA binding domain JH290_13380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JH290_13380 PF00013 KH domain JH290_13380 PF01138 3' exoribonuclease family, domain 1 JH290_13385 PF00312 Ribosomal protein S15 JH290_13390 PF09157 Pseudouridine synthase II TruB, C-terminal JH290_13390 PF16198 tRNA pseudouridylate synthase B C-terminal domain JH290_13390 PF01509 TruB family pseudouridylate synthase (N terminal domain) JH290_13395 PF02033 Ribosome-binding factor A JH290_13400 PF04760 Translation initiation factor IF-2, N-terminal region JH290_13400 PF11987 Translation-initiation factor 2 JH290_13400 PF08364 Bacterial translation initiation factor IF-2 associated region JH290_13400 PF00009 Elongation factor Tu GTP binding domain JH290_13405 PF13184 NusA-like KH domain JH290_13405 PF00575 S1 RNA binding domain JH290_13405 PF08529 NusA N-terminal domain JH290_13410 PF17384 RimP C-terminal SH3 domain JH290_13410 PF02576 RimP N-terminal domain JH290_13420 PF00361 Proton-conducting membrane transporter JH290_13425 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JH290_13425 PF00361 Proton-conducting membrane transporter JH290_13430 PF00361 Proton-conducting membrane transporter JH290_13430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JH290_13435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JH290_13440 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JH290_13445 PF12838 4Fe-4S dicluster domain JH290_13450 PF00146 NADH dehydrogenase JH290_13455 PF00384 Molybdopterin oxidoreductase JH290_13455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JH290_13455 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JH290_13460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JH290_13460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JH290_13460 PF10531 SLBB domain JH290_13470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JH290_13475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JH290_13480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JH290_13485 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JH290_13500 PF00121 Triosephosphate isomerase JH290_13505 PF00106 short chain dehydrogenase JH290_13525 PF00990 Diguanylate cyclase, GGDEF domain JH290_13525 PF00563 EAL domain JH290_13525 PF03707 Bacterial signalling protein N terminal repeat JH290_13540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JH290_13540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JH290_13540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JH290_13540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JH290_13545 PF01039 Carboxyl transferase domain JH290_13545 PF17848 Acetyl-coA carboxylase zinc finger domain JH290_13550 PF00290 Tryptophan synthase alpha chain JH290_13560 PF00291 Pyridoxal-phosphate dependent enzyme JH290_13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_13565 PF03466 LysR substrate binding domain JH290_13570 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JH290_13575 PF01416 tRNA pseudouridine synthase JH290_13590 PF01118 Semialdehyde dehydrogenase, NAD binding domain JH290_13590 PF02774 Semialdehyde dehydrogenase, dimerisation domain JH290_13595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH290_13595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH290_13600 PF01264 Chorismate synthase JH290_13610 PF05175 Methyltransferase small domain JH290_13615 PF02630 SCO1/SenC JH290_13620 PF02666 Phosphatidylserine decarboxylase JH290_13635 PF05872 Bacterial protein of unknown function (DUF853) JH290_13645 PF00293 NUDIX domain JH290_13660 PF03449 Transcription elongation factor, N-terminal JH290_13660 PF01272 Transcription elongation factor, GreA/GreB, C-term JH290_13665 PF04055 Radical SAM superfamily JH290_13665 PF00919 Uncharacterized protein family UPF0004 JH290_13665 PF18693 TRAM domain JH290_13670 PF01738 Dienelactone hydrolase family JH290_13690 PF00692 dUTPase JH290_13695 PF10609 NUBPL iron-transfer P-loop NTPase JH290_13700 PF07715 TonB-dependent Receptor Plug Domain JH290_13700 PF00593 TonB dependent receptor JH290_13720 PF01431 Peptidase family M13 JH290_13720 PF05649 Peptidase family M13 JH290_13740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_13740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH290_13745 PF01266 FAD dependent oxidoreductase JH290_13750 PF04235 Protein of unknown function (DUF418) JH290_13755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH290_13760 PF00877 NlpC/P60 family JH290_13765 PF00877 NlpC/P60 family JH290_13790 PF00158 Sigma-54 interaction domain JH290_13790 PF00072 Response regulator receiver domain JH290_13790 PF02954 Bacterial regulatory protein, Fis family JH290_13795 PF00512 His Kinase A (phospho-acceptor) domain JH290_13795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_13815 PF00375 Sodium:dicarboxylate symporter family JH290_13820 PF00245 Alkaline phosphatase JH290_13825 PF11734 TilS substrate C-terminal domain JH290_13825 PF09179 TilS substrate binding domain JH290_13825 PF01171 PP-loop family JH290_13830 PF02609 Exonuclease VII small subunit JH290_13835 PF00348 Polyprenyl synthetase JH290_13840 PF14521 Lysine-specific metallo-endopeptidase JH290_13850 PF01523 Putative modulator of DNA gyrase JH290_13855 PF04751 Protein of unknown function (DUF615) JH290_13860 PF01523 Putative modulator of DNA gyrase JH290_13870 PF13116 Protein of unknown function JH290_13870 PF13502 AsmA-like C-terminal region JH290_13875 PF00575 S1 RNA binding domain JH290_13875 PF10150 Ribonuclease E/G family JH290_13880 PF02545 Maf-like protein JH290_13885 PF04402 Protein of unknown function (DUF541) JH290_13900 PF02590 Predicted SPOUT methyltransferase JH290_13915 PF01467 Cytidylyltransferase-like JH290_13930 PF08264 Anticodon-binding domain of tRNA JH290_13930 PF00133 tRNA synthetases class I (I, L, M and V) JH290_13930 PF13603 Leucyl-tRNA synthetase, Domain 2 JH290_13940 PF00085 Thioredoxin JH290_13950 PF04070 Domain of unknown function (DUF378) JH290_13965 PF03466 LysR substrate binding domain JH290_13965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_13970 PF01022 Bacterial regulatory protein, arsR family JH290_14005 PF00664 ABC transporter transmembrane region JH290_14005 PF00005 ABC transporter JH290_14010 PF00999 Sodium/hydrogen exchanger family JH290_14015 PF00144 Beta-lactamase JH290_14020 PF03737 Aldolase/RraA JH290_14035 PF01479 S4 domain JH290_14035 PF00849 RNA pseudouridylate synthase JH290_14040 PF00990 Diguanylate cyclase, GGDEF domain JH290_14040 PF00563 EAL domain JH290_14040 PF08448 PAS fold JH290_14045 PF00271 Helicase conserved C-terminal domain JH290_14045 PF03880 DbpA RNA binding domain JH290_14045 PF00270 DEAD/DEAH box helicase JH290_14070 PF01494 FAD binding domain JH290_14100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JH290_14100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JH290_14110 PF00654 Voltage gated chloride channel JH290_14125 PF07715 TonB-dependent Receptor Plug Domain JH290_14125 PF00593 TonB dependent receptor JH290_14140 PF02322 Cytochrome bd terminal oxidase subunit II JH290_14145 PF01654 Cytochrome bd terminal oxidase subunit I JH290_14155 PF12838 4Fe-4S dicluster domain JH290_14155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JH290_14155 PF00384 Molybdopterin oxidoreductase JH290_14155 PF01568 Molydopterin dinucleotide binding domain JH290_14155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JH290_14165 PF00082 Subtilase family JH290_14165 PF13860 FlgD Ig-like domain JH290_14165 PF05922 Peptidase inhibitor I9 JH290_14165 PF02225 PA domain JH290_14185 PF07690 Major Facilitator Superfamily JH290_14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_14190 PF03466 LysR substrate binding domain JH290_14210 PF12833 Helix-turn-helix domain JH290_14210 PF06719 AraC-type transcriptional regulator N-terminus JH290_14220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_14220 PF03466 LysR substrate binding domain JH290_14225 PF00248 Aldo/keto reductase family JH290_14230 PF16859 Tetracyclin repressor-like, C-terminal domain JH290_14230 PF00440 Bacterial regulatory proteins, tetR family JH290_14235 PF02321 Outer membrane efflux protein JH290_14240 PF00873 AcrB/AcrD/AcrF family JH290_14245 PF00529 HlyD membrane-fusion protein of T1SS JH290_14245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_14255 PF01475 Ferric uptake regulator family JH290_14260 PF00749 tRNA synthetases class I (E and Q), catalytic domain JH290_14290 PF06123 Inner membrane protein CreD JH290_14300 PF00672 HAMP domain JH290_14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_14300 PF00512 His Kinase A (phospho-acceptor) domain JH290_14305 PF00072 Response regulator receiver domain JH290_14305 PF00486 Transcriptional regulatory protein, C terminal JH290_14310 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JH290_14325 PF02559 CarD-like/TRCF domain JH290_14325 PF00270 DEAD/DEAH box helicase JH290_14325 PF00271 Helicase conserved C-terminal domain JH290_14325 PF03461 TRCF domain JH290_14325 PF17757 UvrB interaction domain JH290_14345 PF01584 CheW-like domain JH290_14345 PF02895 Signal transducing histidine kinase, homodimeric domain JH290_14345 PF09078 CheY binding JH290_14345 PF01627 Hpt domain JH290_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_14350 PF00672 HAMP domain JH290_14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_14350 PF02203 Tar ligand binding domain homologue JH290_14355 PF01584 CheW-like domain JH290_14360 PF00563 EAL domain JH290_14360 PF00990 Diguanylate cyclase, GGDEF domain JH290_14360 PF03707 Bacterial signalling protein N terminal repeat JH290_14365 PF01739 CheR methyltransferase, SAM binding domain JH290_14365 PF03705 CheR methyltransferase, all-alpha domain JH290_14370 PF00072 Response regulator receiver domain JH290_14370 PF01339 CheB methylesterase JH290_14380 PF05649 Peptidase family M13 JH290_14380 PF01431 Peptidase family M13 JH290_14390 PF00300 Histidine phosphatase superfamily (branch 1) JH290_14395 PF04493 Endonuclease V JH290_14400 PF05726 Pirin C-terminal cupin domain JH290_14400 PF02678 Pirin JH290_14420 PF05726 Pirin C-terminal cupin domain JH290_14420 PF02678 Pirin JH290_14425 PF13722 5TM C-terminal transporter carbon starvation CstA JH290_14425 PF02554 Carbon starvation protein CstA JH290_14430 PF04328 Selenoprotein, putative JH290_14460 PF12804 MobA-like NTP transferase domain JH290_14465 PF13478 XdhC Rossmann domain JH290_14465 PF02625 XdhC and CoxI family JH290_14470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JH290_14470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JH290_14475 PF00941 FAD binding domain in molybdopterin dehydrogenase JH290_14475 PF03450 CO dehydrogenase flavoprotein C-terminal domain JH290_14480 PF00111 2Fe-2S iron-sulfur cluster binding domain JH290_14480 PF10518 TAT (twin-arginine translocation) pathway signal sequence JH290_14480 PF01799 [2Fe-2S] binding domain JH290_14485 PF00107 Zinc-binding dehydrogenase JH290_14485 PF08240 Alcohol dehydrogenase GroES-like domain JH290_14490 PF00990 Diguanylate cyclase, GGDEF domain JH290_14490 PF00360 Phytochrome region JH290_14490 PF01590 GAF domain JH290_14490 PF00563 EAL domain JH290_14500 PF01609 Transposase DDE domain JH290_14500 PF05598 Transposase domain (DUF772) JH290_14510 PF07728 AAA domain (dynein-related subfamily) JH290_14510 PF12102 Domain of unknown function (DUF3578) JH290_14520 PF00436 Single-strand binding protein family JH290_14525 PF00348 Polyprenyl synthetase JH290_14535 PF08245 Mur ligase middle domain JH290_14550 PF01842 ACT domain JH290_14550 PF00696 Amino acid kinase family JH290_14555 PF02567 Phenazine biosynthesis-like protein JH290_14560 PF02567 Phenazine biosynthesis-like protein JH290_14570 PF02566 OsmC-like protein JH290_14575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JH290_14575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JH290_14580 PF03652 Holliday junction resolvase JH290_14585 PF02622 Uncharacterized ACR, COG1678 JH290_14590 PF13687 Domain of unknown function (DUF4153) JH290_14595 PF13673 Acetyltransferase (GNAT) domain JH290_14595 PF13302 Acetyltransferase (GNAT) domain JH290_14595 PF03352 Methyladenine glycosylase JH290_14595 PF00117 Glutamine amidotransferase class-I JH290_14595 PF00958 GMP synthase C terminal domain JH290_14615 PF00437 Type II/IV secretion system protein JH290_14620 PF00437 Type II/IV secretion system protein JH290_14625 PF01168 Alanine racemase, N-terminal domain JH290_14630 PF03807 NADP oxidoreductase coenzyme F420-dependent JH290_14630 PF14748 Pyrroline-5-carboxylate reductase dimerisation JH290_14660 PF01965 DJ-1/PfpI family JH290_14675 PF01458 Uncharacterized protein family (UPF0051) JH290_14685 PF00005 ABC transporter JH290_14690 PF01458 Uncharacterized protein family (UPF0051) JH290_14695 PF00266 Aminotransferase class-V JH290_14705 PF00355 Rieske [2Fe-2S] domain JH290_14710 PF07715 TonB-dependent Receptor Plug Domain JH290_14710 PF00593 TonB dependent receptor JH290_14715 PF18331 PKHD-type hydroxylase C-terminal domain JH290_14715 PF13640 2OG-Fe(II) oxygenase superfamily JH290_14740 PF02424 ApbE family JH290_14745 PF00258 Flavodoxin JH290_14745 PF00175 Oxidoreductase NAD-binding domain JH290_14745 PF00667 FAD binding domain JH290_14760 PF01546 Peptidase family M20/M25/M40 JH290_14760 PF07687 Peptidase dimerisation domain JH290_14770 PF01636 Phosphotransferase enzyme family JH290_14775 PF00483 Nucleotidyl transferase JH290_14780 PF00308 Bacterial dnaA protein JH290_14785 PF01594 AI-2E family transporter JH290_14795 PF00586 AIR synthase related protein, N-terminal domain JH290_14795 PF02769 AIR synthase related protein, C-terminal domain JH290_14805 PF00551 Formyl transferase JH290_14825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JH290_14830 PF01722 BolA-like protein JH290_14835 PF00571 CBS domain JH290_14835 PF01380 SIS domain JH290_14855 PF00005 ABC transporter JH290_14860 PF04963 Sigma-54 factor, core binding domain JH290_14860 PF00309 Sigma-54 factor, Activator interacting domain (AID) JH290_14860 PF04552 Sigma-54, DNA binding domain JH290_14865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JH290_14870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH290_14875 PF07475 HPr Serine kinase C-terminal domain JH290_14875 PF02603 HPr Serine kinase N terminus JH290_14880 PF03668 P-loop ATPase protein family JH290_14890 PF00381 PTS HPr component phosphorylation site JH290_14895 PF05524 PEP-utilising enzyme, N-terminal JH290_14895 PF02896 PEP-utilising enzyme, TIM barrel domain JH290_14895 PF00391 PEP-utilising enzyme, mobile domain JH290_14900 PF03448 MgtE intracellular N domain JH290_14900 PF01769 Divalent cation transporter JH290_14900 PF00571 CBS domain JH290_14910 PF02322 Cytochrome bd terminal oxidase subunit II JH290_14915 PF01654 Cytochrome bd terminal oxidase subunit I JH290_14920 PF00324 Amino acid permease JH290_14925 PF00544 Pectate lyase JH290_14935 PF00561 alpha/beta hydrolase fold JH290_14940 PF00196 Bacterial regulatory proteins, luxR family JH290_14945 PF00324 Amino acid permease JH290_14955 PF00072 Response regulator receiver domain JH290_14955 PF01339 CheB methylesterase JH290_14980 PF04820 Tryptophan halogenase JH290_15010 PF09278 MerR, DNA binding JH290_15010 PF00376 MerR family regulatory protein JH290_15015 PF07690 Major Facilitator Superfamily JH290_15025 PF03738 Glutathionylspermidine synthase preATP-grasp JH290_15050 PF04012 PspA/IM30 family JH290_15060 PF01243 Pyridoxamine 5'-phosphate oxidase JH290_15060 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JH290_15065 PF01202 Shikimate kinase JH290_15070 PF01761 3-dehydroquinate synthase JH290_15080 PF01208 Uroporphyrinogen decarboxylase (URO-D) JH290_15085 PF07690 Major Facilitator Superfamily JH290_15090 PF00072 Response regulator receiver domain JH290_15090 PF01627 Hpt domain JH290_15090 PF00512 His Kinase A (phospho-acceptor) domain JH290_15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_15090 PF00672 HAMP domain JH290_15090 PF17149 Periplasmic sensor domain found in signal transduction proteins JH290_15095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_15095 PF00512 His Kinase A (phospho-acceptor) domain JH290_15095 PF17149 Periplasmic sensor domain found in signal transduction proteins JH290_15095 PF00672 HAMP domain JH290_15095 PF01627 Hpt domain JH290_15095 PF00072 Response regulator receiver domain JH290_15100 PF00072 Response regulator receiver domain JH290_15100 PF01627 Hpt domain JH290_15100 PF00672 HAMP domain JH290_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_15100 PF00512 His Kinase A (phospho-acceptor) domain JH290_15100 PF17149 Periplasmic sensor domain found in signal transduction proteins JH290_15105 PF04264 YceI-like domain JH290_15125 PF03313 Serine dehydratase alpha chain JH290_15125 PF03315 Serine dehydratase beta chain JH290_15135 PF12697 Alpha/beta hydrolase family JH290_15140 PF03447 Homoserine dehydrogenase, NAD binding domain JH290_15140 PF00742 Homoserine dehydrogenase JH290_15140 PF00696 Amino acid kinase family JH290_15145 PF01053 Cys/Met metabolism PLP-dependent enzyme JH290_15150 PF00561 alpha/beta hydrolase fold JH290_15155 PF01551 Peptidase family M23 JH290_15155 PF08460 Bacterial SH3 domain JH290_15160 PF00009 Elongation factor Tu GTP binding domain JH290_15160 PF16658 Class II release factor RF3, C-terminal domain JH290_15165 PF03006 Haemolysin-III related JH290_15170 PF05170 AsmA family JH290_15175 PF00571 CBS domain JH290_15175 PF00478 IMP dehydrogenase / GMP reductase domain JH290_15180 PF00535 Glycosyl transferase family 2 JH290_15185 PF00912 Transglycosylase JH290_15190 PF01430 Hsp33 protein JH290_15200 PF07715 TonB-dependent Receptor Plug Domain JH290_15200 PF00593 TonB dependent receptor JH290_15205 PF00440 Bacterial regulatory proteins, tetR family JH290_15215 PF09317 Domain of unknown function (DUF1974) JH290_15215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_15215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_15215 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_15250 PF01597 Glycine cleavage H-protein JH290_15255 PF01571 Aminomethyltransferase folate-binding domain JH290_15255 PF08669 Glycine cleavage T-protein C-terminal barrel domain JH290_15265 PF01145 SPFH domain / Band 7 family JH290_15265 PF16200 C-terminal region of band_7 JH290_15270 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JH290_15275 PF03819 MazG nucleotide pyrophosphohydrolase domain JH290_15280 PF00459 Inositol monophosphatase family JH290_15285 PF00293 NUDIX domain JH290_15290 PF00202 Aminotransferase class-III JH290_15295 PF04452 RNA methyltransferase JH290_15300 PF02685 Glucokinase JH290_15315 PF00704 Glycosyl hydrolases family 18 JH290_15315 PF01476 LysM domain JH290_15320 PF00728 Glycosyl hydrolase family 20, catalytic domain JH290_15320 PF07691 PA14 domain JH290_15320 PF02838 Glycosyl hydrolase family 20, domain 2 JH290_15330 PF14310 Fibronectin type III-like domain JH290_15330 PF00933 Glycosyl hydrolase family 3 N terminal domain JH290_15330 PF01915 Glycosyl hydrolase family 3 C-terminal domain JH290_15330 PF07691 PA14 domain JH290_15340 PF07971 Glycosyl hydrolase family 92 JH290_15340 PF17678 Glycosyl hydrolase family 92 N-terminal domain JH290_15345 PF01301 Glycosyl hydrolases family 35 JH290_15365 PF05598 Transposase domain (DUF772) JH290_15365 PF01609 Transposase DDE domain JH290_15375 PF05598 Transposase domain (DUF772) JH290_15375 PF01609 Transposase DDE domain JH290_15400 PF02384 N-6 DNA Methylase JH290_15400 PF12161 HsdM N-terminal domain JH290_15420 PF11867 Domain of unknown function (DUF3387) JH290_15420 PF18766 SWI2/SNF2 ATPase JH290_15420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JH290_15455 PF00067 Cytochrome P450 JH290_15460 PF05175 Methyltransferase small domain JH290_15470 PF03932 CutC family JH290_15475 PF01112 Asparaginase JH290_15480 PF12034 Domain of unknown function (DUF3520) JH290_15480 PF00092 von Willebrand factor type A domain JH290_15480 PF12450 von Willebrand factor JH290_15485 PF04542 Sigma-70 region 2 JH290_15485 PF08281 Sigma-70, region 4 JH290_15495 PF13302 Acetyltransferase (GNAT) domain JH290_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_15510 PF01627 Hpt domain JH290_15510 PF00072 Response regulator receiver domain JH290_15510 PF01584 CheW-like domain JH290_15510 PF02895 Signal transducing histidine kinase, homodimeric domain JH290_15515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_15515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JH290_15520 PF01584 CheW-like domain JH290_15525 PF00072 Response regulator receiver domain JH290_15530 PF00072 Response regulator receiver domain JH290_15535 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JH290_15535 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JH290_15545 PF03747 ADP-ribosylglycohydrolase JH290_15550 PF00814 Glycoprotease family JH290_15560 PF04851 Type III restriction enzyme, res subunit JH290_15560 PF13307 Helicase C-terminal domain JH290_15570 PF14814 Bifunctional transglycosylase second domain JH290_15570 PF00905 Penicillin binding protein transpeptidase domain JH290_15570 PF00912 Transglycosylase JH290_15575 PF00535 Glycosyl transferase family 2 JH290_15585 PF04607 Region found in RelA / SpoT proteins JH290_15585 PF02824 TGS domain JH290_15585 PF13291 ACT domain JH290_15590 PF08042 PqqA family JH290_15595 PF12706 Beta-lactamase superfamily domain JH290_15600 PF03070 TENA/THI-4/PQQC family JH290_15605 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JH290_15610 PF04055 Radical SAM superfamily JH290_15610 PF13186 Iron-sulfur cluster-binding domain JH290_15625 PF02685 Glucokinase JH290_15635 PF11898 Domain of unknown function (DUF3418) JH290_15635 PF00270 DEAD/DEAH box helicase JH290_15635 PF00271 Helicase conserved C-terminal domain JH290_15635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JH290_15635 PF04408 Helicase associated domain (HA2) JH290_15640 PF00210 Ferritin-like domain JH290_15645 PF00270 DEAD/DEAH box helicase JH290_15645 PF00271 Helicase conserved C-terminal domain JH290_15645 PF00570 HRDC domain JH290_15645 PF09382 RQC domain JH290_15645 PF16124 RecQ zinc-binding JH290_15660 PF00849 RNA pseudouridylate synthase JH290_15660 PF01479 S4 domain JH290_15680 PF01810 LysE type translocator JH290_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_15685 PF03466 LysR substrate binding domain JH290_15690 PF00654 Voltage gated chloride channel JH290_15725 PF06508 Queuosine biosynthesis protein QueC JH290_15730 PF04055 Radical SAM superfamily JH290_15740 PF00691 OmpA family JH290_15745 PF07676 WD40-like Beta Propeller Repeat JH290_15745 PF04052 TolB amino-terminal domain JH290_15755 PF02472 Biopolymer transport protein ExbD/TolR JH290_15760 PF01618 MotA/TolQ/ExbB proton channel family JH290_15765 PF03061 Thioesterase superfamily JH290_15770 PF05491 RuvB C-terminal winged helix domain JH290_15770 PF05496 Holliday junction DNA helicase RuvB P-loop domain JH290_15770 PF17864 RuvB AAA lid domain JH290_15780 PF02705 K+ potassium transporter JH290_15785 PF07499 RuvA, C-terminal domain JH290_15785 PF01330 RuvA N terminal domain JH290_15790 PF02075 Crossover junction endodeoxyribonuclease RuvC JH290_15795 PF01709 Transcriptional regulator JH290_15810 PF02938 GAD domain JH290_15810 PF00152 tRNA synthetases class II (D, K and N) JH290_15810 PF01336 OB-fold nucleic acid binding domain JH290_15835 PF07690 Major Facilitator Superfamily JH290_15840 PF00982 Glycosyltransferase family 20 JH290_15840 PF05116 Sucrose-6F-phosphate phosphohydrolase JH290_15850 PF04185 Phosphoesterase family JH290_15850 PF05506 Domain of unknown function (DUF756) JH290_15855 PF07859 alpha/beta hydrolase fold JH290_15855 PF13472 GDSL-like Lipase/Acylhydrolase family JH290_15870 PF03466 LysR substrate binding domain JH290_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_15880 PF00005 ABC transporter JH290_15880 PF12848 ABC transporter JH290_15885 PF07715 TonB-dependent Receptor Plug Domain JH290_15885 PF00593 TonB dependent receptor JH290_15895 PF07715 TonB-dependent Receptor Plug Domain JH290_15895 PF00593 TonB dependent receptor JH290_15900 PF00593 TonB dependent receptor JH290_15900 PF07715 TonB-dependent Receptor Plug Domain JH290_15905 PF00067 Cytochrome P450 JH290_15910 PF00999 Sodium/hydrogen exchanger family JH290_15910 PF02254 TrkA-N domain JH290_15940 PF07660 Secretin and TonB N terminus short domain JH290_15940 PF00593 TonB dependent receptor JH290_15940 PF07715 TonB-dependent Receptor Plug Domain JH290_15950 PF06276 Ferric iron reductase FhuF-like transporter JH290_15950 PF04183 IucA / IucC family JH290_15955 PF07690 Major Facilitator Superfamily JH290_15960 PF06276 Ferric iron reductase FhuF-like transporter JH290_15960 PF04183 IucA / IucC family JH290_15965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JH290_15965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JH290_15975 PF02654 Cobalamin-5-phosphate synthase JH290_15985 PF02277 Phosphoribosyltransferase JH290_15990 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JH290_15995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JH290_15995 PF07685 CobB/CobQ-like glutamine amidotransferase domain JH290_16000 PF00155 Aminotransferase class I and II JH290_16005 PF17113 Regulatory signalling modulator protein AmpE JH290_16005 PF03186 CobD/Cbib protein JH290_16010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JH290_16010 PF07685 CobB/CobQ-like glutamine amidotransferase domain JH290_16015 PF12557 Cob(I)alamin adenosyltransferase N terminal JH290_16015 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JH290_16030 PF07715 TonB-dependent Receptor Plug Domain JH290_16030 PF00593 TonB dependent receptor JH290_16035 PF01053 Cys/Met metabolism PLP-dependent enzyme JH290_16045 PF00004 ATPase family associated with various cellular activities (AAA) JH290_16045 PF07724 AAA domain (Cdc48 subfamily) JH290_16045 PF17871 AAA lid domain JH290_16045 PF02861 Clp amino terminal domain, pathogenicity island component JH290_16045 PF10431 C-terminal, D2-small domain, of ClpB protein JH290_16050 PF00005 ABC transporter JH290_16055 PF01541 GIY-YIG catalytic domain JH290_16090 PF00593 TonB dependent receptor JH290_16090 PF07715 TonB-dependent Receptor Plug Domain JH290_16095 PF02358 Trehalose-phosphatase JH290_16100 PF00723 Glycosyl hydrolases family 15 JH290_16105 PF00982 Glycosyltransferase family 20 JH290_16110 PF01011 PQQ enzyme repeat JH290_16115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_16115 PF00672 HAMP domain JH290_16115 PF02203 Tar ligand binding domain homologue JH290_16130 PF02578 Multi-copper polyphenol oxidoreductase laccase JH290_16135 PF00849 RNA pseudouridylate synthase JH290_16140 PF13525 Outer membrane lipoprotein JH290_16150 PF00795 Carbon-nitrogen hydrolase JH290_16150 PF02540 NAD synthase JH290_16165 PF02629 CoA binding domain JH290_16165 PF00549 CoA-ligase JH290_16170 PF08442 ATP-grasp domain JH290_16170 PF00549 CoA-ligase JH290_16175 PF00512 His Kinase A (phospho-acceptor) domain JH290_16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_16180 PF00158 Sigma-54 interaction domain JH290_16180 PF00072 Response regulator receiver domain JH290_16180 PF02954 Bacterial regulatory protein, Fis family JH290_16195 PF00437 Type II/IV secretion system protein JH290_16195 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JH290_16200 PF00114 Pilin (bacterial filament) JH290_16200 PF07963 Prokaryotic N-terminal methylation motif JH290_16205 PF00114 Pilin (bacterial filament) JH290_16205 PF07963 Prokaryotic N-terminal methylation motif JH290_16210 PF00482 Type II secretion system (T2SS), protein F JH290_16215 PF01478 Type IV leader peptidase family JH290_16215 PF06750 Bacterial Peptidase A24 N-terminal domain JH290_16220 PF01121 Dephospho-CoA kinase JH290_16240 PF00512 His Kinase A (phospho-acceptor) domain JH290_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_16240 PF00989 PAS fold JH290_16240 PF11808 Phosphate regulon sensor protein PhoR JH290_16245 PF00072 Response regulator receiver domain JH290_16245 PF00486 Transcriptional regulatory protein, C terminal JH290_16250 PF18030 RimK PreATP-grasp domain JH290_16250 PF08443 RimK-like ATP-grasp domain JH290_16255 PF00128 Alpha amylase, catalytic domain JH290_16255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH290_16335 PF04002 RadC-like JAB domain JH290_16435 PF03797 Autotransporter beta-domain JH290_16435 PF00657 GDSL-like Lipase/Acylhydrolase JH290_16445 PF05690 Thiazole biosynthesis protein ThiG JH290_16450 PF02390 Putative methyltransferase JH290_16455 PF03600 Citrate transporter JH290_16455 PF02080 TrkA-C domain JH290_16470 PF01557 Fumarylacetoacetate (FAA) hydrolase family JH290_16475 PF01741 Large-conductance mechanosensitive channel, MscL JH290_16485 PF00356 Bacterial regulatory proteins, lacI family JH290_16495 PF01341 Glycosyl hydrolases family 6 JH290_16495 PF00553 Cellulose binding domain JH290_16495 PF00041 Fibronectin type III domain JH290_16505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JH290_16505 PF00703 Glycosyl hydrolases family 2 JH290_16505 PF16353 Domain of unknown function(DUF4981) JH290_16505 PF02929 Beta galactosidase small chain JH290_16505 PF02837 Glycosyl hydrolases family 2, sugar binding domain JH290_16510 PF10566 Glycoside hydrolase 97 JH290_16510 PF14508 Glycosyl-hydrolase 97 N-terminal JH290_16510 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JH290_16520 PF00135 Carboxylesterase family JH290_16525 PF08032 RNA 2'-O ribose methyltransferase substrate binding JH290_16525 PF00588 SpoU rRNA Methylase family JH290_16530 PF01235 Sodium:alanine symporter family JH290_16540 PF01433 Peptidase family M1 domain JH290_16540 PF11838 ERAP1-like C-terminal domain JH290_16545 PF00873 AcrB/AcrD/AcrF family JH290_16550 PF00529 HlyD membrane-fusion protein of T1SS JH290_16550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JH290_16555 PF00009 Elongation factor Tu GTP binding domain JH290_16560 PF01507 Phosphoadenosine phosphosulfate reductase family JH290_16565 PF00667 FAD binding domain JH290_16565 PF00258 Flavodoxin JH290_16565 PF00175 Oxidoreductase NAD-binding domain JH290_16570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JH290_16570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JH290_16575 PF01507 Phosphoadenosine phosphosulfate reductase family JH290_16595 PF00512 His Kinase A (phospho-acceptor) domain JH290_16595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_16595 PF01627 Hpt domain JH290_16595 PF00072 Response regulator receiver domain JH290_16595 PF00672 HAMP domain JH290_16605 PF03466 LysR substrate binding domain JH290_16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_16610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JH290_16610 PF14824 Sirohaem biosynthesis protein central JH290_16610 PF10414 Sirohaem synthase dimerisation region JH290_16615 PF00291 Pyridoxal-phosphate dependent enzyme JH290_16625 PF01661 Macro domain JH290_16630 PF00274 Fructose-bisphosphate aldolase class-I JH290_16635 PF00224 Pyruvate kinase, barrel domain JH290_16635 PF02887 Pyruvate kinase, alpha/beta domain JH290_16640 PF13419 Haloacid dehalogenase-like hydrolase JH290_16645 PF00162 Phosphoglycerate kinase JH290_16665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JH290_16665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JH290_16680 PF03922 OmpW family JH290_16695 PF04273 Putative phosphatase (DUF442) JH290_16695 PF00753 Metallo-beta-lactamase superfamily JH290_16705 PF00528 Binding-protein-dependent transport system inner membrane component JH290_16710 PF03459 TOBE domain JH290_16710 PF00005 ABC transporter JH290_16730 PF03965 Penicillinase repressor JH290_16750 PF03734 L,D-transpeptidase catalytic domain JH290_16750 PF01476 LysM domain JH290_16755 PF04225 Opacity-associated protein A LysM-like domain JH290_16755 PF01551 Peptidase family M23 JH290_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_16765 PF03466 LysR substrate binding domain JH290_16775 PF12146 Serine aminopeptidase, S33 JH290_16780 PF00456 Transketolase, thiamine diphosphate binding domain JH290_16780 PF02780 Transketolase, C-terminal domain JH290_16780 PF02779 Transketolase, pyrimidine binding domain JH290_16785 PF00375 Sodium:dicarboxylate symporter family JH290_16815 PF17863 AAA lid domain JH290_16815 PF07726 ATPase family associated with various cellular activities (AAA) JH290_16820 PF03958 Bacterial type II/III secretion system short domain JH290_16820 PF07660 Secretin and TonB N terminus short domain JH290_16820 PF00263 Bacterial type II and III secretion system protein JH290_16820 PF11741 AMIN domain JH290_16825 PF04351 Pilus assembly protein, PilP JH290_16830 PF04350 Pilus assembly protein, PilO JH290_16835 PF05137 Fimbrial assembly protein (PilN) JH290_16840 PF11104 Type IV pilus assembly protein PilM; JH290_16845 PF00905 Penicillin binding protein transpeptidase domain JH290_16845 PF00912 Transglycosylase JH290_16845 PF17092 Penicillin-binding protein OB-like domain JH290_16855 PF00285 Citrate synthase, C-terminal domain JH290_16860 PF01197 Ribosomal protein L31 JH290_16865 PF01156 Inosine-uridine preferring nucleoside hydrolase JH290_16870 PF00270 DEAD/DEAH box helicase JH290_16870 PF00271 Helicase conserved C-terminal domain JH290_16870 PF17191 RecG wedge domain JH290_16875 PF01042 Endoribonuclease L-PSP JH290_16880 PF08666 SAF domain JH290_16880 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JH290_16885 PF03573 outer membrane porin, OprD family JH290_16890 PF13378 Enolase C-terminal domain-like JH290_16890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JH290_16895 PF07690 Major Facilitator Superfamily JH290_16900 PF00171 Aldehyde dehydrogenase family JH290_16905 PF00701 Dihydrodipicolinate synthetase family JH290_16910 PF03466 LysR substrate binding domain JH290_16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_16920 PF13291 ACT domain JH290_16920 PF04607 Region found in RelA / SpoT proteins JH290_16920 PF02824 TGS domain JH290_16925 PF01192 RNA polymerase Rpb6 JH290_16930 PF00625 Guanylate kinase JH290_16935 PF08340 Domain of unknown function (DUF1732) JH290_16935 PF03755 YicC-like family, N-terminal region JH290_16940 PF01138 3' exoribonuclease family, domain 1 JH290_16940 PF03725 3' exoribonuclease family, domain 2 JH290_16945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH290_16950 PF01725 Ham1 family JH290_16955 PF06969 HemN C-terminal domain JH290_16955 PF04055 Radical SAM superfamily JH290_16970 PF00557 Metallopeptidase family M24 JH290_16980 PF05195 Aminopeptidase P, N-terminal domain JH290_16980 PF00557 Metallopeptidase family M24 JH290_16985 PF03695 Uncharacterised protein family (UPF0149) JH290_16995 PF05164 Cell division protein ZapA JH290_17005 PF01812 5-formyltetrahydrofolate cyclo-ligase family JH290_17015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH290_17025 PF13369 Transglutaminase-like superfamily JH290_17030 PF00301 Rubredoxin JH290_17035 PF02581 Thiamine monophosphate synthase JH290_17045 PF00202 Aminotransferase class-III JH290_17050 PF00196 Bacterial regulatory proteins, luxR family JH290_17050 PF17874 MalT-like TPR region JH290_17055 PF00127 Copper binding proteins, plastocyanin/azurin family JH290_17060 PF00155 Aminotransferase class I and II JH290_17070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JH290_17070 PF00034 Cytochrome c JH290_17075 PF01593 Flavin containing amine oxidoreductase JH290_17090 PF00202 Aminotransferase class-III JH290_17095 PF00027 Cyclic nucleotide-binding domain JH290_17095 PF00520 Ion transport protein JH290_17115 PF01569 PAP2 superfamily JH290_17120 PF01062 Bestrophin, RFP-TM, chloride channel JH290_17130 PF01225 Mur ligase family, catalytic domain JH290_17130 PF02875 Mur ligase family, glutamate ligase domain JH290_17130 PF08245 Mur ligase middle domain JH290_17140 PF00365 Phosphofructokinase JH290_17155 PF03030 Inorganic H+ pyrophosphatase JH290_17165 PF00719 Inorganic pyrophosphatase JH290_17175 PF07715 TonB-dependent Receptor Plug Domain JH290_17175 PF00593 TonB dependent receptor JH290_17180 PF12833 Helix-turn-helix domain JH290_17185 PF18500 CadC C-terminal domain 1 JH290_17185 PF00486 Transcriptional regulatory protein, C terminal JH290_17190 PF13667 ThiC-associated domain JH290_17190 PF01964 Radical SAM ThiC family JH290_17195 PF07676 WD40-like Beta Propeller Repeat JH290_17195 PF00326 Prolyl oligopeptidase family JH290_17200 PF00672 HAMP domain JH290_17200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_17200 PF02203 Tar ligand binding domain homologue JH290_17210 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JH290_17210 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JH290_17215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH290_17215 PF00205 Thiamine pyrophosphate enzyme, central domain JH290_17215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH290_17225 PF00291 Pyridoxal-phosphate dependent enzyme JH290_17230 PF08502 LeuA allosteric (dimerisation) domain JH290_17230 PF00682 HMGL-like JH290_17235 PF00180 Isocitrate/isopropylmalate dehydrogenase JH290_17240 PF08241 Methyltransferase domain JH290_17245 PF00694 Aconitase C-terminal domain JH290_17250 PF00330 Aconitase family (aconitate hydratase) JH290_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_17260 PF03707 Bacterial signalling protein N terminal repeat JH290_17260 PF13188 PAS domain JH290_17260 PF00990 Diguanylate cyclase, GGDEF domain JH290_17260 PF00563 EAL domain JH290_17275 PF02321 Outer membrane efflux protein JH290_17280 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JH290_17285 PF03279 Bacterial lipid A biosynthesis acyltransferase JH290_17310 PF00390 Malic enzyme, N-terminal domain JH290_17310 PF03949 Malic enzyme, NAD binding domain JH290_17310 PF01515 Phosphate acetyl/butaryl transferase JH290_17315 PF00375 Sodium:dicarboxylate symporter family JH290_17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_17325 PF00512 His Kinase A (phospho-acceptor) domain JH290_17335 PF00196 Bacterial regulatory proteins, luxR family JH290_17335 PF00072 Response regulator receiver domain JH290_17345 PF08521 Two-component sensor kinase N-terminal JH290_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_17345 PF00512 His Kinase A (phospho-acceptor) domain JH290_17350 PF00072 Response regulator receiver domain JH290_17350 PF00486 Transcriptional regulatory protein, C terminal JH290_17360 PF03600 Citrate transporter JH290_17365 PF00106 short chain dehydrogenase JH290_17370 PF00356 Bacterial regulatory proteins, lacI family JH290_17385 PF00128 Alpha amylase, catalytic domain JH290_17400 PF03193 RsgA GTPase JH290_17405 PF00155 Aminotransferase class I and II JH290_17420 PF01522 Polysaccharide deacetylase JH290_17425 PF00462 Glutaredoxin JH290_17440 PF01979 Amidohydrolase family JH290_17445 PF01979 Amidohydrolase family JH290_17480 PF02645 Uncharacterised protein, DegV family COG1307 JH290_17490 PF00892 EamA-like transporter family JH290_17495 PF02567 Phenazine biosynthesis-like protein JH290_17510 PF00756 Putative esterase JH290_17515 PF04828 Glutathione-dependent formaldehyde-activating enzyme JH290_17520 PF08240 Alcohol dehydrogenase GroES-like domain JH290_17520 PF00107 Zinc-binding dehydrogenase JH290_17525 PF02583 Metal-sensitive transcriptional repressor JH290_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_17530 PF03466 LysR substrate binding domain JH290_17545 PF00072 Response regulator receiver domain JH290_17545 PF00486 Transcriptional regulatory protein, C terminal JH290_17550 PF00672 HAMP domain JH290_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_17550 PF00512 His Kinase A (phospho-acceptor) domain JH290_17555 PF04107 Glutamate-cysteine ligase family 2(GCS2) JH290_17560 PF01926 50S ribosome-binding GTPase JH290_17565 PF00034 Cytochrome c JH290_17575 PF01323 DSBA-like thioredoxin domain JH290_17585 PF02028 BCCT, betaine/carnitine/choline family transporter JH290_17590 PF00171 Aldehyde dehydrogenase family JH290_17595 PF05199 GMC oxidoreductase JH290_17595 PF00732 GMC oxidoreductase JH290_17600 PF07715 TonB-dependent Receptor Plug Domain JH290_17600 PF00593 TonB dependent receptor JH290_17605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JH290_17605 PF01464 Transglycosylase SLT domain JH290_17610 PF01743 Poly A polymerase head domain JH290_17610 PF01966 HD domain JH290_17610 PF12627 Probable RNA and SrmB- binding site of polymerase A JH290_17625 PF01979 Amidohydrolase family JH290_17630 PF01380 SIS domain JH290_17635 PF00356 Bacterial regulatory proteins, lacI family JH290_17640 PF07690 Major Facilitator Superfamily JH290_17645 PF00392 Bacterial regulatory proteins, gntR family JH290_17645 PF07702 UTRA domain JH290_17665 PF03934 Type II secretion system (T2SS), protein K JH290_17670 PF07963 Prokaryotic N-terminal methylation motif JH290_17670 PF11612 Type II secretion system (T2SS), protein J JH290_17675 PF07963 Prokaryotic N-terminal methylation motif JH290_17675 PF02501 Type II secretion system (T2SS), protein I JH290_17685 PF08334 Type II secretion system (T2SS), protein G JH290_17685 PF07963 Prokaryotic N-terminal methylation motif JH290_17690 PF00482 Type II secretion system (T2SS), protein F JH290_17695 PF00437 Type II/IV secretion system protein JH290_17700 PF03958 Bacterial type II/III secretion system short domain JH290_17700 PF00263 Bacterial type II and III secretion system protein JH290_17740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JH290_17745 PF00512 His Kinase A (phospho-acceptor) domain JH290_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_17750 PF00072 Response regulator receiver domain JH290_17755 PF00512 His Kinase A (phospho-acceptor) domain JH290_17755 PF00360 Phytochrome region JH290_17755 PF08446 PAS fold JH290_17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_17755 PF01590 GAF domain JH290_17760 PF04972 BON domain JH290_17765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH290_17765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH290_17770 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JH290_17770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH290_17805 PF00293 NUDIX domain JH290_17805 PF01467 Cytidylyltransferase-like JH290_17815 PF03466 LysR substrate binding domain JH290_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_17825 PF03572 Peptidase family S41 JH290_17825 PF00595 PDZ domain JH290_17825 PF11818 C-terminal domain of tail specific protease (DUF3340) JH290_17825 PF17804 Tail specific protease N-terminal domain JH290_17830 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JH290_17830 PF04055 Radical SAM superfamily JH290_17835 PF03099 Biotin/lipoate A/B protein ligase family JH290_17840 PF04359 Protein of unknown function (DUF493) JH290_17850 PF07943 Penicillin-binding protein 5, C-terminal domain JH290_17850 PF00768 D-alanyl-D-alanine carboxypeptidase JH290_17855 PF05036 Sporulation related domain JH290_17855 PF03330 Lytic transglycolase JH290_17860 PF13406 Transglycosylase SLT domain JH290_17865 PF00295 Glycosyl hydrolases family 28 JH290_17880 PF02534 Type IV secretory system Conjugative DNA transfer JH290_17890 PF01098 Cell cycle protein JH290_17895 PF03717 Penicillin-binding Protein dimerisation domain JH290_17895 PF00905 Penicillin binding protein transpeptidase domain JH290_17905 PF04085 rod shape-determining protein MreC JH290_17915 PF00294 pfkB family carbohydrate kinase JH290_17920 PF01590 GAF domain JH290_17920 PF02954 Bacterial regulatory protein, Fis family JH290_17920 PF00158 Sigma-54 interaction domain JH290_17925 PF07660 Secretin and TonB N terminus short domain JH290_17925 PF00593 TonB dependent receptor JH290_17925 PF07715 TonB-dependent Receptor Plug Domain JH290_17930 PF08240 Alcohol dehydrogenase GroES-like domain JH290_17930 PF00107 Zinc-binding dehydrogenase JH290_17950 PF13360 PQQ-like domain JH290_17965 PF01433 Peptidase family M1 domain JH290_17965 PF11838 ERAP1-like C-terminal domain JH290_17970 PF03707 Bacterial signalling protein N terminal repeat JH290_17970 PF00990 Diguanylate cyclase, GGDEF domain JH290_17970 PF00563 EAL domain JH290_17975 PF01209 ubiE/COQ5 methyltransferase family JH290_17985 PF13533 Biotin-lipoyl like JH290_17990 PF13673 Acetyltransferase (GNAT) domain JH290_18005 PF00004 ATPase family associated with various cellular activities (AAA) JH290_18005 PF07724 AAA domain (Cdc48 subfamily) JH290_18005 PF10431 C-terminal, D2-small domain, of ClpB protein JH290_18010 PF00227 Proteasome subunit JH290_18020 PF00589 Phage integrase family JH290_18020 PF02899 Phage integrase, N-terminal SAM-like domain JH290_18030 PF01678 Diaminopimelate epimerase JH290_18040 PF04304 Protein of unknown function (DUF454) JH290_18045 PF00326 Prolyl oligopeptidase family JH290_18045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JH290_18050 PF00155 Aminotransferase class I and II JH290_18065 PF00326 Prolyl oligopeptidase family JH290_18065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JH290_18095 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JH290_18095 PF03900 Porphobilinogen deaminase, C-terminal domain JH290_18100 PF00072 Response regulator receiver domain JH290_18100 PF04397 LytTr DNA-binding domain JH290_18105 PF06580 Histidine kinase JH290_18105 PF07694 5TMR of 5TMR-LYT JH290_18115 PF13632 Glycosyl transferase family group 2 JH290_18120 PF03600 Citrate transporter JH290_18120 PF02080 TrkA-C domain JH290_18130 PF07715 TonB-dependent Receptor Plug Domain JH290_18130 PF07660 Secretin and TonB N terminus short domain JH290_18130 PF00593 TonB dependent receptor JH290_18135 PF00990 Diguanylate cyclase, GGDEF domain JH290_18135 PF08448 PAS fold JH290_18140 PF00916 Sulfate permease family JH290_18140 PF01740 STAS domain JH290_18145 PF00553 Cellulose binding domain JH290_18145 PF00150 Cellulase (glycosyl hydrolase family 5) JH290_18150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_18150 PF02203 Tar ligand binding domain homologue JH290_18150 PF00672 HAMP domain JH290_18155 PF05598 Transposase domain (DUF772) JH290_18155 PF01609 Transposase DDE domain JH290_18160 PF13426 PAS domain JH290_18160 PF08448 PAS fold JH290_18160 PF05231 MASE1 JH290_18160 PF00990 Diguanylate cyclase, GGDEF domain JH290_18160 PF00563 EAL domain JH290_18160 PF08447 PAS fold JH290_18185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JH290_18185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JH290_18195 PF01204 Trehalase JH290_18215 PF01544 CorA-like Mg2+ transporter protein JH290_18220 PF00324 Amino acid permease JH290_18230 PF00553 Cellulose binding domain JH290_18230 PF01341 Glycosyl hydrolases family 6 JH290_18230 PF00041 Fibronectin type III domain JH290_18235 PF03330 Lytic transglycolase JH290_18245 PF00497 Bacterial extracellular solute-binding proteins, family 3 JH290_18250 PF00892 EamA-like transporter family JH290_18280 PF02082 Transcriptional regulator JH290_18285 PF00990 Diguanylate cyclase, GGDEF domain JH290_18290 PF07759 Protein of unknown function (DUF1615) JH290_18295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JH290_18295 PF00326 Prolyl oligopeptidase family JH290_18305 PF12823 Domain of unknown function (DUF3817) JH290_18305 PF03176 MMPL family JH290_18430 PF17831 Pyruvate dehydrogenase E1 component middle domain JH290_18430 PF00456 Transketolase, thiamine diphosphate binding domain JH290_18435 PF07745 Glycosyl hydrolase family 53 JH290_18470 PF00392 Bacterial regulatory proteins, gntR family JH290_18470 PF07729 FCD domain JH290_18480 PF00109 Beta-ketoacyl synthase, N-terminal domain JH290_18480 PF02801 Beta-ketoacyl synthase, C-terminal domain JH290_18480 PF00550 Phosphopantetheine attachment site JH290_18480 PF16197 Ketoacyl-synthetase C-terminal extension JH290_18480 PF00698 Acyl transferase domain JH290_18480 PF08659 KR domain JH290_18485 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JH290_18490 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JH290_18500 PF01039 Carboxyl transferase domain JH290_18505 PF06857 Malonate decarboxylase delta subunit (MdcD) JH290_18510 PF16957 Malonate decarboxylase, alpha subunit, transporter JH290_18515 PF13847 Methyltransferase domain JH290_18515 PF03551 Transcriptional regulator PadR-like family JH290_18525 PF04264 YceI-like domain JH290_18530 PF00881 Nitroreductase family JH290_18555 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JH290_18565 PF03710 Glutamate-ammonia ligase adenylyltransferase JH290_18565 PF08335 GlnD PII-uridylyltransferase JH290_18585 PF07715 TonB-dependent Receptor Plug Domain JH290_18585 PF07660 Secretin and TonB N terminus short domain JH290_18585 PF00593 TonB dependent receptor JH290_18595 PF04773 FecR protein JH290_18595 PF16220 Domain of unknown function (DUF4880) JH290_18610 PF08450 SMP-30/Gluconolactonase/LRE-like region JH290_18625 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JH290_18625 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JH290_18635 PF00793 DAHP synthetase I family JH290_18650 PF01609 Transposase DDE domain JH290_18650 PF05598 Transposase domain (DUF772) JH290_18660 PF07715 TonB-dependent Receptor Plug Domain JH290_18660 PF00593 TonB dependent receptor JH290_18675 PF01738 Dienelactone hydrolase family JH290_18680 PF00118 TCP-1/cpn60 chaperonin family JH290_18685 PF00166 Chaperonin 10 Kd subunit JH290_18690 PF04231 Endonuclease I JH290_18695 PF03091 CutA1 divalent ion tolerance protein JH290_18700 PF11412 Disulphide bond corrector protein DsbC JH290_18700 PF02683 Cytochrome C biogenesis protein transmembrane region JH290_18720 PF01220 Dehydroquinase class II JH290_18725 PF00364 Biotin-requiring enzyme JH290_18735 PF00289 Biotin carboxylase, N-terminal domain JH290_18735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH290_18735 PF02785 Biotin carboxylase C-terminal domain JH290_18760 PF01381 Helix-turn-helix JH290_18770 PF02954 Bacterial regulatory protein, Fis family JH290_18805 PF12146 Serine aminopeptidase, S33 JH290_18805 PF12147 Putative methyltransferase JH290_18810 PF01066 CDP-alcohol phosphatidyltransferase JH290_18815 PF01808 AICARFT/IMPCHase bienzyme JH290_18815 PF02142 MGS-like domain JH290_18825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JH290_18825 PF02843 Phosphoribosylglycinamide synthetase, C domain JH290_18825 PF02844 Phosphoribosylglycinamide synthetase, N domain JH290_18830 PF12805 FUSC-like inner membrane protein yccS JH290_18840 PF07690 Major Facilitator Superfamily JH290_18845 PF03466 LysR substrate binding domain JH290_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_18875 PF03186 CobD/Cbib protein JH290_18875 PF17113 Regulatory signalling modulator protein AmpE JH290_18880 PF09297 NADH pyrophosphatase zinc ribbon domain JH290_18880 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JH290_18880 PF00293 NUDIX domain JH290_18885 PF01521 Iron-sulphur cluster biosynthesis JH290_18905 PF03707 Bacterial signalling protein N terminal repeat JH290_18905 PF00990 Diguanylate cyclase, GGDEF domain JH290_18905 PF00563 EAL domain JH290_18910 PF00072 Response regulator receiver domain JH290_18910 PF01627 Hpt domain JH290_18910 PF00512 His Kinase A (phospho-acceptor) domain JH290_18910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_18910 PF00672 HAMP domain JH290_18910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JH290_18915 PF00210 Ferritin-like domain JH290_18925 PF00293 NUDIX domain JH290_18940 PF00380 Ribosomal protein S9/S16 JH290_18945 PF00572 Ribosomal protein L13 JH290_18950 PF03232 Ubiquinone biosynthesis protein COQ7 JH290_18955 PF00893 Small Multidrug Resistance protein JH290_18960 PF02675 S-adenosylmethionine decarboxylase JH290_18965 PF00027 Cyclic nucleotide-binding domain JH290_18965 PF00325 Bacterial regulatory proteins, crp family JH290_18975 PF00218 Indole-3-glycerol phosphate synthase JH290_18980 PF00591 Glycosyl transferase family, a/b domain JH290_18980 PF02885 Glycosyl transferase family, helical bundle domain JH290_18985 PF01613 Flavin reductase like domain JH290_18990 PF00117 Glutamine amidotransferase class-I JH290_19000 PF00155 Aminotransferase class I and II JH290_19005 PF04715 Anthranilate synthase component I, N terminal region JH290_19005 PF00425 chorismate binding enzyme JH290_19010 PF00781 Diacylglycerol kinase catalytic domain JH290_19020 PF00834 Ribulose-phosphate 3 epimerase family JH290_19030 PF00226 DnaJ domain JH290_19030 PF01556 DnaJ C terminal domain JH290_19030 PF00684 DnaJ central domain JH290_19035 PF01259 SAICAR synthetase JH290_19075 PF13244 Domain of unknown function (DUF4040) JH290_19075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JH290_19075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JH290_19075 PF00361 Proton-conducting membrane transporter JH290_19080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JH290_19085 PF00361 Proton-conducting membrane transporter JH290_19095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JH290_19100 PF03334 Na+/H+ antiporter subunit JH290_19120 PF04209 homogentisate 1,2-dioxygenase JH290_19125 PF04480 Protein of unknown function (DUF559) JH290_19130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH290_19135 PF01047 MarR family JH290_19145 PF00854 POT family JH290_19150 PF03301 Tryptophan 2,3-dioxygenase JH290_19160 PF00676 Dehydrogenase E1 component JH290_19165 PF02779 Transketolase, pyrimidine binding domain JH290_19165 PF02780 Transketolase, C-terminal domain JH290_19175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JH290_19175 PF02817 e3 binding domain JH290_19175 PF00364 Biotin-requiring enzyme JH290_19185 PF00271 Helicase conserved C-terminal domain JH290_19185 PF00270 DEAD/DEAH box helicase JH290_19200 PF00873 AcrB/AcrD/AcrF family JH290_19210 PF00440 Bacterial regulatory proteins, tetR family JH290_19215 PF02321 Outer membrane efflux protein JH290_19220 PF06903 VirK protein JH290_19235 PF13460 NAD(P)H-binding JH290_19240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH290_19240 PF00128 Alpha amylase, catalytic domain JH290_19250 PF00128 Alpha amylase, catalytic domain JH290_19255 PF02446 4-alpha-glucanotransferase JH290_19260 PF00128 Alpha amylase, catalytic domain JH290_19260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH290_19260 PF11941 Domain of unknown function (DUF3459) JH290_19265 PF00128 Alpha amylase, catalytic domain JH290_19265 PF02806 Alpha amylase, C-terminal all-beta domain JH290_19265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH290_19270 PF00534 Glycosyl transferases group 1 JH290_19270 PF08323 Starch synthase catalytic domain JH290_19275 PF00990 Diguanylate cyclase, GGDEF domain JH290_19280 PF02638 Glycosyl hydrolase-like 10 JH290_19285 PF05661 Protein of unknown function (DUF808) JH290_19290 PF03109 ABC1 family JH290_19295 PF00884 Sulfatase JH290_19300 PF00924 Mechanosensitive ion channel JH290_19300 PF12795 Mechanosensitive ion channel porin domain JH290_19300 PF12794 Mechanosensitive ion channel inner membrane domain 1 JH290_19330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JH290_19330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JH290_19335 PF00593 TonB dependent receptor JH290_19335 PF07715 TonB-dependent Receptor Plug Domain JH290_19355 PF01040 UbiA prenyltransferase family JH290_19365 PF06968 Biotin and Thiamin Synthesis associated domain JH290_19365 PF04055 Radical SAM superfamily JH290_19370 PF00155 Aminotransferase class I and II JH290_19380 PF12697 Alpha/beta hydrolase family JH290_19390 PF13649 Methyltransferase domain JH290_19410 PF00291 Pyridoxal-phosphate dependent enzyme JH290_19420 PF13932 GidA associated domain JH290_19420 PF01134 Glucose inhibited division protein A JH290_19425 PF10677 Protein of unknown function (DUF2490) JH290_19430 PF07859 alpha/beta hydrolase fold JH290_19440 PF01614 Bacterial transcriptional regulator JH290_19440 PF09339 IclR helix-turn-helix domain JH290_19450 PF02627 Carboxymuconolactone decarboxylase family JH290_19455 PF12146 Serine aminopeptidase, S33 JH290_19460 PF10397 Adenylosuccinate lyase C-terminus JH290_19460 PF00206 Lyase JH290_19465 PF00775 Dioxygenase JH290_19465 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JH290_19470 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JH290_19470 PF00775 Dioxygenase JH290_19475 PF00108 Thiolase, N-terminal domain JH290_19475 PF02803 Thiolase, C-terminal domain JH290_19480 PF01144 Coenzyme A transferase JH290_19485 PF01144 Coenzyme A transferase JH290_19490 PF00355 Rieske [2Fe-2S] domain JH290_19495 PF00970 Oxidoreductase FAD-binding domain JH290_19495 PF00111 2Fe-2S iron-sulfur cluster binding domain JH290_19500 PF08220 DeoR-like helix-turn-helix domain JH290_19500 PF00455 DeoR C terminal sensor domain JH290_19505 PF01266 FAD dependent oxidoreductase JH290_19505 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JH290_19510 PF00230 Major intrinsic protein JH290_19515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH290_19515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH290_19525 PF01494 FAD binding domain JH290_19535 PF00171 Aldehyde dehydrogenase family JH290_19555 PF11871 Domain of unknown function (DUF3391) JH290_19555 PF01966 HD domain JH290_19560 PF07690 Major Facilitator Superfamily JH290_19570 PF00132 Bacterial transferase hexapeptide (six repeats) JH290_19580 PF03692 Putative zinc- or iron-chelating domain JH290_19590 PF00920 Dehydratase family JH290_19600 PF13495 Phage integrase, N-terminal SAM-like domain JH290_19600 PF00589 Phage integrase family JH290_19670 PF02203 Tar ligand binding domain homologue JH290_19670 PF00672 HAMP domain JH290_19670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_19680 PF01638 HxlR-like helix-turn-helix JH290_19685 PF05368 NmrA-like family JH290_19700 PF08267 Cobalamin-independent synthase, N-terminal domain JH290_19700 PF01717 Cobalamin-independent synthase, Catalytic domain JH290_19710 PF03358 NADPH-dependent FMN reductase JH290_19715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_19715 PF03466 LysR substrate binding domain JH290_19720 PF02219 Methylenetetrahydrofolate reductase JH290_19730 PF00551 Formyl transferase JH290_19740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH290_19740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JH290_19745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JH290_19750 PF02146 Sir2 family JH290_19765 PF07690 Major Facilitator Superfamily JH290_19770 PF03466 LysR substrate binding domain JH290_19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_19780 PF01026 TatD related DNase JH290_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_19785 PF03466 LysR substrate binding domain JH290_19790 PF00355 Rieske [2Fe-2S] domain JH290_19795 PF00111 2Fe-2S iron-sulfur cluster binding domain JH290_19800 PF00860 Permease family JH290_19810 PF01156 Inosine-uridine preferring nucleoside hydrolase JH290_19815 PF01425 Amidase JH290_19825 PF13091 PLD-like domain JH290_19835 PF07690 Major Facilitator Superfamily JH290_19840 PF03466 LysR substrate binding domain JH290_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_19845 PF07687 Peptidase dimerisation domain JH290_19845 PF01546 Peptidase family M20/M25/M40 JH290_19850 PF00266 Aminotransferase class-V JH290_19870 PF13454 FAD-NAD(P)-binding JH290_19875 PF00576 HIUase/Transthyretin family JH290_19880 PF07308 Protein of unknown function (DUF1456) JH290_19885 PF00672 HAMP domain JH290_19885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JH290_19885 PF02203 Tar ligand binding domain homologue JH290_19890 PF04408 Helicase associated domain (HA2) JH290_19890 PF00271 Helicase conserved C-terminal domain JH290_19890 PF08482 ATP-dependent helicase C-terminal JH290_19890 PF00270 DEAD/DEAH box helicase JH290_19900 PF00849 RNA pseudouridylate synthase JH290_19910 PF00248 Aldo/keto reductase family JH290_19915 PF16884 N-terminal domain of oxidoreductase JH290_19915 PF00107 Zinc-binding dehydrogenase JH290_19920 PF00248 Aldo/keto reductase family JH290_19950 PF02566 OsmC-like protein JH290_19955 PF01047 MarR family JH290_19965 PF03969 AFG1-like ATPase JH290_19985 PF07683 Cobalamin synthesis protein cobW C-terminal domain JH290_19985 PF02492 CobW/HypB/UreG, nucleotide-binding domain JH290_20000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JH290_20040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JH290_20040 PF02770 Acyl-CoA dehydrogenase, middle domain JH290_20040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JH290_20045 PF01039 Carboxyl transferase domain JH290_20050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH290_20050 PF02785 Biotin carboxylase C-terminal domain JH290_20050 PF00289 Biotin carboxylase, N-terminal domain JH290_20050 PF18140 Propionyl-coenzyme A carboxylase BT domain JH290_20050 PF00364 Biotin-requiring enzyme JH290_20055 PF00326 Prolyl oligopeptidase family JH290_20075 PF00990 Diguanylate cyclase, GGDEF domain JH290_20080 PF00463 Isocitrate lyase family JH290_20085 PF01274 Malate synthase JH290_20090 PF03466 LysR substrate binding domain JH290_20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_20100 PF12706 Beta-lactamase superfamily domain JH290_20110 PF01432 Peptidase family M3 JH290_20115 PF01112 Asparaginase JH290_20125 PF00472 RF-1 domain JH290_20135 PF00849 RNA pseudouridylate synthase JH290_20140 PF03109 ABC1 family JH290_20150 PF07478 D-ala D-ala ligase C-terminus JH290_20150 PF01820 D-ala D-ala ligase N-terminus JH290_20165 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JH290_20170 PF00501 AMP-binding enzyme JH290_20175 PF03692 Putative zinc- or iron-chelating domain JH290_20180 PF00561 alpha/beta hydrolase fold JH290_20190 PF01555 DNA methylase JH290_20195 PF02661 Fic/DOC family JH290_20195 PF13784 Fic/DOC family N-terminal JH290_20200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JH290_20200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JH290_20215 PF00588 SpoU rRNA Methylase family JH290_20230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH290_20230 PF00205 Thiamine pyrophosphate enzyme, central domain JH290_20230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH290_20240 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JH290_20240 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JH290_20245 PF02556 Preprotein translocase subunit SecB JH290_20250 PF00581 Rhodanese-like domain JH290_20290 PF00108 Thiolase, N-terminal domain JH290_20290 PF02803 Thiolase, C-terminal domain JH290_20300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH290_20305 PF00080 Copper/zinc superoxide dismutase (SODC) JH290_20310 PF00080 Copper/zinc superoxide dismutase (SODC) JH290_20320 PF00158 Sigma-54 interaction domain JH290_20320 PF02954 Bacterial regulatory protein, Fis family JH290_20320 PF00072 Response regulator receiver domain JH290_20325 PF00989 PAS fold JH290_20325 PF00512 His Kinase A (phospho-acceptor) domain JH290_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_20330 PF00909 Ammonium Transporter Family JH290_20335 PF00543 Nitrogen regulatory protein P-II JH290_20340 PF03951 Glutamine synthetase, beta-Grasp domain JH290_20340 PF00120 Glutamine synthetase, catalytic domain JH290_20345 PF02673 Bacitracin resistance protein BacA JH290_20375 PF03061 Thioesterase superfamily JH290_20380 PF13091 PLD-like domain JH290_20385 PF04264 YceI-like domain JH290_20390 PF00300 Histidine phosphatase superfamily (branch 1) JH290_20395 PF01883 Iron-sulfur cluster assembly protein JH290_20395 PF10609 NUBPL iron-transfer P-loop NTPase JH290_20425 PF10017 Histidine-specific methyltransferase, SAM-dependent JH290_20430 PF12867 DinB superfamily JH290_20430 PF03781 Sulfatase-modifying factor enzyme 1 JH290_20440 PF00528 Binding-protein-dependent transport system inner membrane component JH290_20445 PF00571 CBS domain JH290_20445 PF00005 ABC transporter JH290_20460 PF00005 ABC transporter JH290_20470 PF01734 Patatin-like phospholipase JH290_20480 PF07715 TonB-dependent Receptor Plug Domain JH290_20480 PF07660 Secretin and TonB N terminus short domain JH290_20480 PF00593 TonB dependent receptor JH290_20485 PF01037 Lrp/AsnC ligand binding domain JH290_20490 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JH290_20500 PF00657 GDSL-like Lipase/Acylhydrolase JH290_20515 PF04962 KduI/IolB family JH290_20520 PF00356 Bacterial regulatory proteins, lacI family JH290_20525 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JH290_20525 PF04616 Glycosyl hydrolases family 43 JH290_20530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JH290_20540 PF03480 Bacterial extracellular solute-binding protein, family 7 JH290_20550 PF07859 alpha/beta hydrolase fold JH290_20550 PF13472 GDSL-like Lipase/Acylhydrolase family JH290_20555 PF00135 Carboxylesterase family JH290_20560 PF13472 GDSL-like Lipase/Acylhydrolase family JH290_20565 PF00248 Aldo/keto reductase family JH290_20600 PF00128 Alpha amylase, catalytic domain JH290_20600 PF02806 Alpha amylase, C-terminal all-beta domain JH290_20600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH290_20605 PF00128 Alpha amylase, catalytic domain JH290_20605 PF16657 Maltogenic Amylase, C-terminal domain JH290_20610 PF00128 Alpha amylase, catalytic domain JH290_20610 PF11896 Domain of unknown function (DUF3416) JH290_20700 PF01095 Pectinesterase JH290_20715 PF00294 pfkB family carbohydrate kinase JH290_20730 PF07055 Enoyl reductase FAD binding domain JH290_20730 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JH290_20730 PF12241 Trans-2-enoyl-CoA reductase catalytic region JH290_20735 PF00486 Transcriptional regulatory protein, C terminal JH290_20735 PF18500 CadC C-terminal domain 1 JH290_20760 PF01070 FMN-dependent dehydrogenase JH290_20765 PF13298 DNA polymerase Ligase (LigD) JH290_20765 PF01068 ATP dependent DNA ligase domain JH290_20765 PF04679 ATP dependent DNA ligase C terminal region JH290_20770 PF02735 Ku70/Ku80 beta-barrel domain JH290_20790 PF00171 Aldehyde dehydrogenase family JH290_20800 PF00593 TonB dependent receptor JH290_20800 PF07715 TonB-dependent Receptor Plug Domain JH290_20805 PF00155 Aminotransferase class I and II JH290_20810 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JH290_20840 PF07726 ATPase family associated with various cellular activities (AAA) JH290_20840 PF17863 AAA lid domain JH290_20880 PF00083 Sugar (and other) transporter JH290_20880 PF08946 Osmosensory transporter coiled coil JH290_20885 PF00085 Thioredoxin JH290_20895 PF07859 alpha/beta hydrolase fold JH290_20900 PF01594 AI-2E family transporter JH290_20905 PF13344 Haloacid dehalogenase-like hydrolase JH290_20905 PF00293 NUDIX domain JH290_20915 PF01447 Thermolysin metallopeptidase, catalytic domain JH290_20915 PF16485 Protealysin propeptide JH290_20915 PF02868 Thermolysin metallopeptidase, alpha-helical domain JH290_20950 PF00072 Response regulator receiver domain JH290_20950 PF00196 Bacterial regulatory proteins, luxR family JH290_20955 PF05532 CsbD-like JH290_20960 PF05598 Transposase domain (DUF772) JH290_20960 PF01609 Transposase DDE domain JH290_21050 PF03006 Haemolysin-III related JH290_21055 PF02661 Fic/DOC family JH290_21055 PF13784 Fic/DOC family N-terminal JH290_21060 PF00270 DEAD/DEAH box helicase JH290_21060 PF09369 Domain of unknown function (DUF1998) JH290_21060 PF00271 Helicase conserved C-terminal domain JH290_21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_21115 PF03466 LysR substrate binding domain JH290_21130 PF03466 LysR substrate binding domain JH290_21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH290_21135 PF02525 Flavodoxin-like fold JH290_21215 PF03377 TAL effector repeat JH290_21255 PF00239 Resolvase, N terminal domain JH290_21255 PF02796 Helix-turn-helix domain of resolvase JH290_21300 PF03743 Bacterial conjugation TrbI-like protein JH290_21315 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JH290_21355 PF00437 Type II/IV secretion system protein JH290_21365 PF02534 Type IV secretory system Conjugative DNA transfer JH290_21420 PF00398 Ribosomal RNA adenine dimethylase JH290_21435 PF00310 Glutamine amidotransferases class-II JH290_21435 PF01493 GXGXG motif JH290_21435 PF01645 Conserved region in glutamate synthase JH290_21435 PF04898 Glutamate synthase central domain JH290_21440 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH290_21440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JH290_21450 PF08240 Alcohol dehydrogenase GroES-like domain JH290_21450 PF00107 Zinc-binding dehydrogenase JH290_21455 PF00150 Cellulase (glycosyl hydrolase family 5) JH290_21460 PF00150 Cellulase (glycosyl hydrolase family 5) JH290_21465 PF00150 Cellulase (glycosyl hydrolase family 5) JH290_21480 PF04389 Peptidase family M28 JH290_21490 PF01551 Peptidase family M23 JH290_21500 PF13180 PDZ domain JH290_21500 PF03572 Peptidase family S41 JH290_21505 PF01842 ACT domain JH290_21505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH290_21505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH290_21520 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JH290_21530 PF04055 Radical SAM superfamily JH290_21535 PF13091 PLD-like domain JH290_21535 PF13396 Phospholipase_D-nuclease N-terminal JH290_21545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JH290_21550 PF02472 Biopolymer transport protein ExbD/TolR JH290_21555 PF02472 Biopolymer transport protein ExbD/TolR JH290_21560 PF01618 MotA/TolQ/ExbB proton channel family JH290_21565 PF03544 Gram-negative bacterial TonB protein C-terminal JH290_21575 PF01435 Peptidase family M48 JH290_21585 PF00204 DNA gyrase B JH290_21585 PF00986 DNA gyrase B subunit, carboxyl terminus JH290_21585 PF18053 DNA gyrase B subunit insert domain JH290_21585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH290_21585 PF01751 Toprim domain JH290_21590 PF02463 RecF/RecN/SMC N terminal domain JH290_21595 PF00712 DNA polymerase III beta subunit, N-terminal domain JH290_21595 PF02767 DNA polymerase III beta subunit, central domain JH290_21595 PF02768 DNA polymerase III beta subunit, C-terminal domain