XCV0001 PF00308 Bacterial dnaA protein XCV0001 PF08299 Bacterial dnaA protein helix-turn-helix XCV0001 PF11638 DnaA N-terminal domain XCV0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XCV0002 PF02767 DNA polymerase III beta subunit, central domain XCV0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XCV0003 PF02463 RecF/RecN/SMC N terminal domain XCV0004 PF00204 DNA gyrase B XCV0004 PF00986 DNA gyrase B subunit, carboxyl terminus XCV0004 PF01751 Toprim domain XCV0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0005 PF02517 CAAX protease self-immunity XCV0006 PF01435 Peptidase family M48 XCV0007 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) XCV0007 PF13181 Tetratricopeptide repeat XCV0008 PF03544 Gram-negative bacterial TonB protein C-terminal XCV0009 PF01618 XCV0009 XCV0010 PF02472 Biopolymer transport protein ExbD/TolR XCV0011 PF02472 Biopolymer transport protein ExbD/TolR XCV0012 PF02472 Biopolymer transport protein ExbD/TolR XCV0013 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XCV0015 PF13091 PLD-like domain XCV0018 PF04055 Radical SAM superfamily XCV0019 PF13640 2OG-Fe(II) oxygenase superfamily XCV0020 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XCV0021 PF01694 Rhomboid family XCV0022 PF08850 XCV0022 XCV0023 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCV0023 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCV0024 PF03572 Peptidase family S41 XCV0024 PF13180 PDZ domain XCV0025 PF01551 Peptidase family M23 XCV0027 PF02225 PA domain XCV0027 PF04389 Peptidase family M28 XCV0028 PF13670 XCV0028 XCV0029 PF00150 Cellulase (glycosyl hydrolase family 5) XCV0031 PF00150 Cellulase (glycosyl hydrolase family 5) XCV0033 PF00150 Cellulase (glycosyl hydrolase family 5) XCV0034 PF00107 Zinc-binding dehydrogenase XCV0034 PF08240 Alcohol dehydrogenase GroES-like domain XCV0036 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV0036 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XCV0037 PF00310 Glutamine amidotransferases class-II XCV0037 PF01493 GXGXG motif XCV0037 PF01645 Conserved region in glutamate synthase XCV0037 PF04898 Glutamate synthase central domain XCV0038 PF11720 Peptidase inhibitor I78 family XCV0039 PF01028 Eukaryotic DNA topoisomerase I, catalytic core XCV0041 PF01804 Penicillin amidase XCV0042 PF01804 Penicillin amidase XCV0043 PF05368 NmrA-like family XCV0044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0044 PF03466 LysR substrate binding domain XCV0045 PF03965 Penicillinase repressor XCV0046 PF05569 BlaR1 peptidase M56 XCV0048 PF03435 Saccharopine dehydrogenase XCV0049 PF08975 Domain of unknown function (DUF1868) XCV0050 PF00593 TonB dependent receptor XCV0050 PF07715 TonB-dependent Receptor Plug Domain XCV0051 PF00480 ROK family XCV0052 PF03009 Glycerophosphoryl diester phosphodiesterase family XCV0054 PF13482 RNase_H superfamily XCV0055 PF00270 DEAD/DEAH box helicase XCV0055 PF00271 Helicase conserved C-terminal domain XCV0055 PF09369 XCV0055 XCV0056 PF03006 XCV0056 XCV0057 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system XCV0058 PF05016 Plasmid stabilisation system protein XCV0059 PF00106 short chain dehydrogenase XCV0060 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0062 PF13175 AAA ATPase domain XCV0063 PF00069 Protein kinase domain XCV0065 PF01527 Transposase XCV0066 PF13276 XCV0066 XCV0066 PF13683 XCV0066 XCV0071 PF05532 CsbD-like XCV0072 PF08668 HDOD domain XCV0073 PF08327 Activator of Hsp90 ATPase homolog 1-like protein XCV0075 PF01447 Thermolysin metallopeptidase, catalytic domain XCV0075 PF02868 Thermolysin metallopeptidase, alpha-helical domain XCV0076 PF13460 NADH(P)-binding XCV0077 PF00293 NUDIX domain XCV0078 PF01435 Peptidase family M48 XCV0079 PF10116 XCV0079 XCV0080 PF00085 Thioredoxin XCV0081 PF07690 Major Facilitator Superfamily XCV0082 PF08327 Activator of Hsp90 ATPase homolog 1-like protein XCV0083 PF12787 XCV0083 XCV0084 PF06080 XCV0084 XCV0087 PF07584 XCV0087 XCV0088 PF01882 XCV0088 XCV0089 PF07726 ATPase family associated with various cellular activities (AAA) XCV0090 PF13709 Domain of unknown function (DUF4159) XCV0091 PF01523 Putative modulator of DNA gyrase XCV0092 PF01523 Putative modulator of DNA gyrase XCV0093 PF01523 Putative modulator of DNA gyrase XCV0095 PF09932 XCV0095 XCV0098 PF00316 Fructose-1-6-bisphosphatase XCV0101 PF00155 Aminotransferase class I and II XCV0102 PF00593 TonB dependent receptor XCV0102 PF07715 TonB-dependent Receptor Plug Domain XCV0105 PF00171 Aldehyde dehydrogenase family XCV0106 PF05610 XCV0106 XCV0109 PF02735 Ku70/Ku80 beta-barrel domain XCV0110 PF01070 FMN-dependent dehydrogenase XCV0111 PF03055 Retinal pigment epithelial membrane protein XCV0112 PF09912 XCV0112 XCV0113 PF04191 Phospholipid methyltransferase XCV0114 PF07730 Histidine kinase XCV0115 PF00072 Response regulator receiver domain XCV0115 PF00196 Bacterial regulatory proteins, luxR family XCV0119 PF00486 Transcriptional regulatory protein, C terminal XCV0119 PF13191 AAA ATPase domain XCV0120 PF07055 Enoyl reductase FAD binding domain XCV0120 PF12241 Trans-2-enoyl-CoA reductase catalytic region XCV0120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XCV0122 PF00294 pfkB family carbohydrate kinase XCV0123 PF00593 TonB dependent receptor XCV0123 PF07715 TonB-dependent Receptor Plug Domain XCV0124 PF13385 Concanavalin A-like lectin/glucanases superfamily XCV0125 PF13276 XCV0125 XCV0125 PF13683 XCV0125 XCV0126 PF01527 Transposase XCV0129 PF01609 Transposase DDE domain XCV0129 PF05598 XCV0129 XCV0130 PF13166 XCV0130 XCV0131 PF08845 XCV0131 XCV0133 PF14106 XCV0133 XCV0137 PF05368 NmrA-like family XCV0138 PF12802 MarR family XCV0139 PF00128 Alpha amylase, catalytic domain XCV0139 PF11896 Domain of unknown function (DUF3416) XCV0140 PF00128 Alpha amylase, catalytic domain XCV0140 PF16657 XCV0140 XCV0141 PF00128 Alpha amylase, catalytic domain XCV0141 PF02806 Alpha amylase, C-terminal all-beta domain XCV0141 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCV0142 PF12850 Calcineurin-like phosphoesterase superfamily domain XCV0143 PF00248 Aldo/keto reductase family XCV0144 PF00135 Carboxylesterase family XCV0145 PF07859 alpha/beta hydrolase fold XCV0147 PF03480 Bacterial extracellular solute-binding protein, family 7 XCV0148 PF04290 XCV0148 XCV0149 PF06808 XCV0149 XCV0150 PF04616 Glycosyl hydrolases family 43 XCV0151 PF00356 Bacterial regulatory proteins, lacI family XCV0151 PF13377 Periplasmic binding protein-like domain XCV0152 PF04962 KduI/IolB family XCV0153 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0154 PF02502 Ribose/Galactose Isomerase XCV0154 PF12408 Ribose-5-phosphate isomerase XCV0155 PF07883 Cupin domain XCV0155 PF13472 GDSL-like Lipase/Acylhydrolase family XCV0156 PF14300 Domain of unknown function (DUF4375) XCV0157 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XCV0158 PF01037 AsnC family XCV0158 PF13404 AsnC-type helix-turn-helix domain XCV0159 PF00593 TonB dependent receptor XCV0159 PF07715 TonB-dependent Receptor Plug Domain XCV0160 PF01734 Patatin-like phospholipase XCV0161 PF01546 Peptidase family M20/M25/M40 XCV0161 PF07687 Peptidase dimerisation domain XCV0162 PF01987 Mitochondrial biogenesis AIM24 XCV0163 PF00005 ABC transporter XCV0164 PF00487 XCV0164 XCV0165 PF13202 EF hand XCV0166 PF00005 ABC transporter XCV0167 PF00528 Binding-protein-dependent transport system inner membrane component XCV0167 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XCV0168 PF00266 Aminotransferase class-V XCV0169 PF03781 Sulfatase-modifying factor enzyme 1 XCV0169 PF12867 DinB superfamily XCV0170 PF10017 XCV0170 XCV0171 PF11625 Protein of unknown function (DUF3253) XCV0172 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase XCV0174 PF03547 XCV0174 XCV0175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCV0176 PF00300 Histidine phosphatase superfamily (branch 1) XCV0177 PF04264 YceI-like domain XCV0178 PF13091 PLD-like domain XCV0179 PF03061 Thioesterase superfamily XCV0180 PF01553 Acyltransferase XCV0181 PF12146 Putative lysophospholipase XCV0183 PF13432 Tetratricopeptide repeat XCV0184 PF01161 Phosphatidylethanolamine-binding protein XCV0185 PF00107 Zinc-binding dehydrogenase XCV0185 PF08240 Alcohol dehydrogenase GroES-like domain XCV0186 PF03724 META domain XCV0186 PF14302 XCV0186 XCV0187 PF02673 XCV0187 XCV0188 PF00120 Glutamine synthetase, catalytic domain XCV0188 PF03951 Glutamine synthetase, beta-Grasp domain XCV0189 PF00543 Nitrogen regulatory protein P-II XCV0190 PF00909 Ammonium Transporter Family XCV0191 PF00512 His Kinase A (phospho-acceptor) domain XCV0191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0192 PF00072 Response regulator receiver domain XCV0192 PF00158 Sigma-54 interaction domain XCV0192 PF02954 Bacterial regulatory protein, Fis family XCV0193 PF00080 Copper/zinc superoxide dismutase (SODC) XCV0194 PF00080 Copper/zinc superoxide dismutase (SODC) XCV0196 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV0198 PF00108 Thiolase, N-terminal domain XCV0198 PF02803 Thiolase, C-terminal domain XCV0199 PF07219 XCV0199 XCV0200 PF04375 XCV0200 XCV0201 PF02602 Uroporphyrinogen-III synthase HemD XCV0202 PF01755 XCV0202 XCV0203 PF09500 Putative thioesterase (yiiD_Cterm) XCV0205 PF00581 Rhodanese-like domain XCV0206 PF02556 Preprotein translocase subunit SecB XCV0207 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XCV0207 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XCV0211 PF16473 XCV0211 XCV0212 PF06527 XCV0212 XCV0213 PF13401 AAA domain XCV0214 PF00665 Integrase core domain XCV0221 PF13175 AAA ATPase domain XCV0222 PF13276 XCV0222 XCV0222 PF13683 XCV0222 XCV0223 PF01527 Transposase XCV0224 PF13304 AAA domain XCV0225 PF13245 Part of AAA domain XCV0228 PF00665 Integrase core domain XCV0229 PF01527 Transposase XCV0230 PF00205 Thiamine pyrophosphate enzyme, central domain XCV0230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCV0230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCV0231 PF00512 His Kinase A (phospho-acceptor) domain XCV0231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0232 PF00072 Response regulator receiver domain XCV0232 PF00158 Sigma-54 interaction domain XCV0232 PF02954 Bacterial regulatory protein, Fis family XCV0235 PF07690 Major Facilitator Superfamily XCV0236 PF00588 SpoU rRNA Methylase family XCV0238 PF13698 XCV0238 XCV0239 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCV0239 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCV0240 PF02661 Fic/DOC family XCV0240 PF13784 Fic/DOC family N-terminal XCV0241 PF00561 alpha/beta hydrolase fold XCV0242 PF03692 XCV0242 XCV0243 PF00501 AMP-binding enzyme XCV0244 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XCV0245 PF07043 XCV0245 XCV0246 PF01820 D-ala D-ala ligase N-terminus XCV0246 PF07478 D-ala D-ala ligase C-terminus XCV0247 PF02036 SCP-2 sterol transfer family XCV0248 PF03109 XCV0248 XCV0249 PF07883 Cupin domain XCV0250 PF00849 RNA pseudouridylate synthase XCV0251 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) XCV0252 PF00472 RF-1 domain XCV0253 PF01553 Acyltransferase XCV0254 PF01112 Asparaginase XCV0255 PF01432 Peptidase family M3 XCV0256 PF00106 short chain dehydrogenase XCV0257 PF12706 Beta-lactamase superfamily domain XCV0258 PF00440 Bacterial regulatory proteins, tetR family XCV0258 PF14246 AefR-like transcriptional repressor, C-terminal region XCV0259 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV0260 PF12833 Helix-turn-helix domain XCV0261 PF00999 Sodium/hydrogen exchanger family XCV0263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0263 PF03466 LysR substrate binding domain XCV0264 PF01274 Malate synthase XCV0265 PF00463 Isocitrate lyase family XCV0266 PF00027 Cyclic nucleotide-binding domain XCV0266 PF00990 GGDEF domain XCV0267 PF13181 Tetratricopeptide repeat XCV0267 PF14559 Tetratricopeptide repeat XCV0269 PF00881 Nitroreductase family XCV0270 PF00326 Prolyl oligopeptidase family XCV0271 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain XCV0271 PF00364 Biotin-requiring enzyme XCV0271 PF02785 Biotin carboxylase C-terminal domain XCV0271 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCV0272 PF01039 Carboxyl transferase domain XCV0273 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV0273 PF02770 Acyl-CoA dehydrogenase, middle domain XCV0273 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV0274 PF00440 Bacterial regulatory proteins, tetR family XCV0276 PF08808 XCV0276 XCV0277 PF11804 XCV0277 XCV0278 PF03929 XCV0278 XCV0279 PF12365 XCV0279 XCV0281 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCV0282 PF03372 Endonuclease/Exonuclease/phosphatase family XCV0283 PF03203 XCV0283 XCV0284 PF02492 CobW/HypB/UreG, nucleotide-binding domain XCV0284 PF07683 Cobalamin synthesis protein cobW C-terminal domain XCV0286 PF00892 EamA-like transporter family XCV0287 PF12146 Putative lysophospholipase XCV0288 PF03969 AFG1-like ATPase XCV0289 PF01047 MarR family XCV0290 PF02566 OsmC-like protein XCV0292 PF11101 XCV0292 XCV0295 PF00107 Zinc-binding dehydrogenase XCV0295 PF16884 XCV0295 XCV0296 PF00248 Aldo/keto reductase family XCV0298 PF00849 RNA pseudouridylate synthase XCV0300 PF00271 Helicase conserved C-terminal domain XCV0300 PF04408 Helicase associated domain (HA2) XCV0300 PF08482 XCV0300 XCV0302 PF07308 XCV0302 XCV0303 PF00576 HIUase/Transthyretin family XCV0304 PF13738 Pyridine nucleotide-disulphide oxidoreductase XCV0305 PF09349 OHCU decarboxylase XCV0306 PF11533 Protein of unknown function (DUF3225) XCV0307 PF01522 Polysaccharide deacetylase XCV0308 PF00266 Aminotransferase class-V XCV0309 PF01546 Peptidase family M20/M25/M40 XCV0309 PF07687 Peptidase dimerisation domain XCV0311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0311 PF03466 LysR substrate binding domain XCV0312 PF00561 alpha/beta hydrolase fold XCV0314 PF01019 Gamma-glutamyltranspeptidase XCV0315 PF01425 Amidase XCV0316 PF01156 Inosine-uridine preferring nucleoside hydrolase XCV0317 PF00962 Adenosine/AMP deaminase XCV0318 PF00860 Permease family XCV0319 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV0319 PF00175 Oxidoreductase NAD-binding domain XCV0319 PF00970 Oxidoreductase FAD-binding domain XCV0320 PF00355 Rieske [2Fe-2S] domain XCV0321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0321 PF03466 LysR substrate binding domain XCV0322 PF01026 TatD related DNase XCV0325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0325 PF03466 LysR substrate binding domain XCV0326 PF07690 Major Facilitator Superfamily XCV0327 PF13411 MerR HTH family regulatory protein XCV0328 PF12697 Alpha/beta hydrolase family XCV0329 PF02146 Sir2 family XCV0330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCV0331 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCV0331 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCV0333 PF00551 Formyl transferase XCV0333 PF01842 ACT domain XCV0334 PF00072 Response regulator receiver domain XCV0334 PF00486 Transcriptional regulatory protein, C terminal XCV0335 PF00512 His Kinase A (phospho-acceptor) domain XCV0335 PF00672 HAMP domain XCV0335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0336 PF16576 XCV0336 XCV0337 PF00873 AcrB/AcrD/AcrF family XCV0338 PF02321 Outer membrane efflux protein XCV0340 PF02219 Methylenetetrahydrofolate reductase XCV0341 PF02677 XCV0341 XCV0342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0342 PF03466 LysR substrate binding domain XCV0343 PF03358 NADPH-dependent FMN reductase XCV0344 PF08908 XCV0344 XCV0345 PF01717 Cobalamin-independent synthase, Catalytic domain XCV0346 PF03812 XCV0346 XCV0347 PF07396 Phosphate-selective porin O and P XCV0349 PF05368 NmrA-like family XCV0350 PF01638 HxlR-like helix-turn-helix XCV0353 PF01124 MAPEG family XCV0354 PF00665 Integrase core domain XCV0354 PF13276 XCV0354 XCV0355 PF01527 Transposase XCV0356 PF00589 Phage integrase family XCV0356 PF13495 Phage integrase, N-terminal SAM-like domain XCV0357 PF00920 Dehydratase family XCV0358 PF00150 Cellulase (glycosyl hydrolase family 5) XCV0359 PF03692 XCV0359 XCV0360 PF00132 Bacterial transferase hexapeptide (six repeats) XCV0362 PF07690 Major Facilitator Superfamily XCV0363 PF11871 XCV0363 XCV0363 PF13487 HD domain XCV0364 PF12802 MarR family XCV0365 PF13557 XCV0365 XCV0366 PF00106 short chain dehydrogenase XCV0366 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0367 PF00171 Aldehyde dehydrogenase family XCV0368 PF02311 AraC-like ligand binding domain XCV0368 PF12833 Helix-turn-helix domain XCV0369 PF01494 FAD binding domain XCV0371 PF12680 SnoaL-like domain XCV0372 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCV0372 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCV0373 PF00230 Major intrinsic protein XCV0374 PF01266 FAD dependent oxidoreductase XCV0374 PF16901 XCV0374 XCV0375 PF00455 XCV0375 XCV0375 PF08220 DeoR-like helix-turn-helix domain XCV0376 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV0376 PF00175 Oxidoreductase NAD-binding domain XCV0376 PF00970 Oxidoreductase FAD-binding domain XCV0377 PF00355 Rieske [2Fe-2S] domain XCV0378 PF01144 Coenzyme A transferase XCV0379 PF01144 Coenzyme A transferase XCV0380 PF00108 Thiolase, N-terminal domain XCV0380 PF02803 Thiolase, C-terminal domain XCV0381 PF00775 Dioxygenase XCV0381 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XCV0382 PF00775 Dioxygenase XCV0383 PF00206 Lyase XCV0383 PF10397 Adenylosuccinate lyase C-terminus XCV0384 PF00561 alpha/beta hydrolase fold XCV0385 PF02627 Carboxymuconolactone decarboxylase family XCV0386 PF12146 Putative lysophospholipase XCV0387 PF01614 Bacterial transcriptional regulator XCV0387 PF09339 IclR helix-turn-helix domain XCV0388 PF01163 RIO1 family XCV0389 PF07859 alpha/beta hydrolase fold XCV0390 PF10677 XCV0390 XCV0391 PF01134 Glucose inhibited division protein A XCV0391 PF13932 GidA associated domain 3 XCV0394 PF00291 Pyridoxal-phosphate dependent enzyme XCV0395 PF02698 DUF218 domain XCV0396 PF12680 SnoaL-like domain XCV0397 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XCV0398 PF08241 Methyltransferase domain XCV0399 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0400 PF12697 Alpha/beta hydrolase family XCV0402 PF00155 Aminotransferase class I and II XCV0403 PF04055 Radical SAM superfamily XCV0403 PF06968 Biotin and Thiamin Synthesis associated domain XCV0404 PF00156 Phosphoribosyl transferase domain XCV0405 PF01040 UbiA prenyltransferase family XCV0408 PF13855 Leucine rich repeat XCV0411 PF05819 XCV0411 XCV0416 PF05932 Tir chaperone protein (CesT) family XCV0421 PF01313 XCV0421 XCV0422 PF00813 XCV0422 XCV0423 PF01052 Surface presentation of antigens (SPOA) XCV0424 PF09483 XCV0424 XCV0425 PF00771 FHIPEP family XCV0426 PF01312 FlhB HrpN YscU SpaS Family XCV0427 PF09613 XCV0427 XCV0428 PF09487 XCV0428 XCV0429 PF01514 Secretory protein of YscJ/FliF family XCV0430 PF09502 XCV0430 XCV0431 PF02108 XCV0431 XCV0432 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCV0432 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCV0433 PF09486 XCV0433 XCV0434 PF01311 XCV0434 XCV0435 PF00263 XCV0435 XCV0435 PF03958 Bacterial type II/III secretion system short domain XCV0436 PF12762 XCV0436 XCV0437 PF02902 Ulp1 protease family, C-terminal catalytic domain XCV0438 PF01527 Transposase XCV0439 PF13276 XCV0439 XCV0439 PF13683 XCV0439 XCV0441 PF01464 Transglycosylase SLT domain XCV0444 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XCV0445 PF00924 Mechanosensitive ion channel XCV0445 PF12607 XCV0445 XCV0446 PF00884 Sulfatase XCV0448 PF03109 XCV0448 XCV0449 PF05661 XCV0449 XCV0450 PF00990 GGDEF domain XCV0451 PF00534 Glycosyl transferases group 1 XCV0451 PF08323 Starch synthase catalytic domain XCV0452 PF00128 Alpha amylase, catalytic domain XCV0452 PF02806 Alpha amylase, C-terminal all-beta domain XCV0452 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCV0453 PF00128 Alpha amylase, catalytic domain XCV0453 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCV0453 PF11941 Domain of unknown function (DUF3459) XCV0454 PF02446 4-alpha-glucanotransferase XCV0455 PF00128 Alpha amylase, catalytic domain XCV0456 PF11154 XCV0456 XCV0457 PF00128 Alpha amylase, catalytic domain XCV0457 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCV0458 PF13460 NADH(P)-binding XCV0459 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0461 PF00890 FAD binding domain XCV0461 PF13454 FAD-NAD(P)-binding XCV0462 PF06903 XCV0462 XCV0463 PF02321 Outer membrane efflux protein XCV0464 PF00440 Bacterial regulatory proteins, tetR family XCV0465 PF16576 XCV0465 XCV0466 PF00873 AcrB/AcrD/AcrF family XCV0467 PF00106 short chain dehydrogenase XCV0470 PF00270 DEAD/DEAH box helicase XCV0470 PF00271 Helicase conserved C-terminal domain XCV0471 PF03421 XCV0471 XCV0473 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCV0473 PF00364 Biotin-requiring enzyme XCV0473 PF02817 e3 binding domain XCV0474 PF07653 Variant SH3 domain XCV0475 PF02779 Transketolase, pyrimidine binding domain XCV0475 PF02780 Transketolase, C-terminal domain XCV0476 PF00676 Dehydrogenase E1 component XCV0477 PF00932 Lamin Tail Domain XCV0477 PF03160 Calx-beta domain XCV0477 PF03372 Endonuclease/Exonuclease/phosphatase family XCV0478 PF03301 Tryptophan 2,3-dioxygenase XCV0479 PF00854 POT family XCV0480 PF13899 Thioredoxin-like XCV0481 PF12802 MarR family XCV0482 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV0482 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal XCV0483 PF04480 Protein of unknown function (DUF559) XCV0484 PF04209 homogentisate 1,2-dioxygenase XCV0487 PF03334 XCV0487 XCV0488 PF04066 XCV0488 XCV0489 PF01899 XCV0489 XCV0490 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV0491 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCV0492 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV0492 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCV0492 PF04039 XCV0492 XCV0492 PF13244 XCV0492 XCV0493 PF01370 NAD dependent epimerase/dehydratase family XCV0494 PF06127 XCV0494 XCV0495 PF01447 Thermolysin metallopeptidase, catalytic domain XCV0495 PF02868 Thermolysin metallopeptidase, alpha-helical domain XCV0495 PF07504 Fungalysin/Thermolysin Propeptide Motif XCV0496 PF00182 Chitinase class I XCV0496 PF01471 Putative peptidoglycan binding domain XCV0496 PF01551 Peptidase family M23 XCV0500 PF01259 SAICAR synthetase XCV0501 PF00226 DnaJ domain XCV0502 PF00834 Ribulose-phosphate 3 epimerase family XCV0503 PF00583 Acetyltransferase (GNAT) family XCV0504 PF00781 Diacylglycerol kinase catalytic domain XCV0505 PF00425 chorismate binding enzyme XCV0505 PF04715 Anthranilate synthase component I, N terminal region XCV0506 PF01212 Beta-eliminating lyase XCV0507 PF04402 Protein of unknown function (DUF541) XCV0509 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XCV0509 PF04851 Type III restriction enzyme, res subunit XCV0509 PF12008 Type I restriction and modification enzyme - subunit R C terminal XCV0510 PF01420 Type I restriction modification DNA specificity domain XCV0511 PF13166 XCV0511 XCV0512 PF13310 XCV0512 XCV0513 PF02384 N-6 DNA Methylase XCV0513 PF12161 HsdM N-terminal domain XCV0514 PF00117 Glutamine amidotransferase class-I XCV0515 PF01613 Flavin reductase like domain XCV0516 PF00591 Glycosyl transferase family, a/b domain XCV0516 PF02885 Glycosyl transferase family, helical bundle domain XCV0517 PF00218 Indole-3-glycerol phosphate synthase XCV0518 PF12710 haloacid dehalogenase-like hydrolase XCV0519 PF00027 Cyclic nucleotide-binding domain XCV0519 PF00325 Bacterial regulatory proteins, crp family XCV0520 PF02675 S-adenosylmethionine decarboxylase XCV0521 PF00893 Small Multidrug Resistance protein XCV0522 PF03232 XCV0522 XCV0523 PF00572 Ribosomal protein L13 XCV0524 PF00380 Ribosomal protein S9/S16 XCV0525 PF00293 NUDIX domain XCV0526 PF04324 BFD-like [2Fe-2S] binding domain XCV0527 PF00210 Ferritin-like domain XCV0528 PF00072 Response regulator receiver domain XCV0528 PF00512 His Kinase A (phospho-acceptor) domain XCV0528 PF01627 Hpt domain XCV0528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0529 PF00072 Response regulator receiver domain XCV0529 PF00563 EAL domain XCV0529 PF00990 GGDEF domain XCV0531 PF13548 XCV0531 XCV0533 PF04519 XCV0533 XCV0534 PF01521 Iron-sulphur cluster biosynthesis XCV0536 PF03583 Secretory lipase XCV0537 PF00293 NUDIX domain XCV0537 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XCV0537 PF09297 NADH pyrophosphatase zinc ribbon domain XCV0538 PF03186 XCV0538 XCV0539 PF10825 XCV0539 XCV0540 PF04505 XCV0540 XCV0541 PF01553 Acyltransferase XCV0541 PF07690 Major Facilitator Superfamily XCV0542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0542 PF03466 LysR substrate binding domain XCV0543 PF07690 Major Facilitator Superfamily XCV0544 PF12805 XCV0544 XCV0544 PF13515 XCV0544 XCV0545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XCV0545 PF02843 Phosphoribosylglycinamide synthetase, C domain XCV0545 PF02844 Phosphoribosylglycinamide synthetase, N domain XCV0547 PF01808 AICARFT/IMPCHase bienzyme XCV0547 PF02142 MGS-like domain XCV0548 PF01066 CDP-alcohol phosphatidyltransferase XCV0549 PF12146 Putative lysophospholipase XCV0549 PF12147 XCV0549 XCV0550 PF00782 Dual specificity phosphatase, catalytic domain XCV0550 PF14378 XCV0550 XCV0553 PF01066 CDP-alcohol phosphatidyltransferase XCV0554 PF01553 Acyltransferase XCV0555 PF01148 Cytidylyltransferase family XCV0556 PF02954 Bacterial regulatory protein, Fis family XCV0557 PF11906 XCV0557 XCV0558 PF01381 Helix-turn-helix XCV0560 PF06325 Ribosomal protein L11 methyltransferase (PrmA) XCV0563 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain XCV0563 PF02785 Biotin carboxylase C-terminal domain XCV0563 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCV0564 PF05635 23S rRNA-intervening sequence protein XCV0565 PF00364 Biotin-requiring enzyme XCV0566 PF01220 Dehydroquinase class II XCV0567 PF02683 XCV0567 XCV0567 PF11412 Disulphide bond corrector protein DsbC XCV0567 PF13899 Thioredoxin-like XCV0568 PF03091 CutA1 divalent ion tolerance protein XCV0569 PF04231 Endonuclease I XCV0569 PF13205 Bacterial Ig-like domain XCV0570 PF00166 Chaperonin 10 Kd subunit XCV0571 PF00118 TCP-1/cpn60 chaperonin family XCV0573 PF00593 TonB dependent receptor XCV0573 PF07715 TonB-dependent Receptor Plug Domain XCV0574 PF00793 DAHP synthetase I family XCV0577 PF08450 SMP-30/Gluconolaconase/LRE-like region XCV0579 PF03710 Glutamate-ammonia ligase adenylyltransferase XCV0579 PF08335 GlnD PII-uridylyltransferase XCV0580 PF02592 XCV0580 XCV0583 PF00082 Subtilase family XCV0583 PF09286 Pro-kumamolisin, activation domain XCV0585 PF09916 XCV0585 XCV0586 PF06258 XCV0586 XCV0587 PF00881 Nitroreductase family XCV0588 PF04264 YceI-like domain XCV0590 PF00328 Histidine phosphatase superfamily (branch 2) XCV0592 PF04954 Siderophore-interacting protein XCV0592 PF08021 Siderophore-interacting FAD-binding domain XCV0593 PF03551 Transcriptional regulator PadR-like family XCV0594 PF16957 XCV0594 XCV0595 PF06857 XCV0595 XCV0596 PF01039 Carboxyl transferase domain XCV0597 PF06833 Malonate decarboxylase gamma subunit (MdcE) XCV0598 PF10620 XCV0598 XCV0599 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XCV0600 PF00698 Acyl transferase domain XCV0601 PF03600 Citrate transporter XCV0601 PF07158 XCV0601 XCV0602 PF00392 Bacterial regulatory proteins, gntR family XCV0602 PF07729 FCD domain XCV0603 PF13419 Haloacid dehalogenase-like hydrolase XCV0604 PF01740 STAS domain XCV0605 PF13581 Histidine kinase-like ATPase domain XCV0606 PF00672 HAMP domain XCV0606 PF02743 Cache domain XCV0606 PF07228 Stage II sporulation protein E (SpoIIE) XCV0608 PF01764 Lipase (class 3) XCV0610 PF07745 Glycosyl hydrolase family 53 XCV0611 PF00456 Transketolase, thiamine diphosphate binding domain XCV0612 PF00004 ATPase family associated with various cellular activities (AAA) XCV0614 PF00082 Subtilase family XCV0615 PF01797 Transposase IS200 like XCV0618 PF00665 Integrase core domain XCV0618 PF13276 XCV0618 XCV0619 PF01527 Transposase XCV0620 PF01527 Transposase XCV0621 PF00665 Integrase core domain XCV0622 PF01609 Transposase DDE domain XCV0622 PF05598 XCV0622 XCV0623 PF01797 Transposase IS200 like XCV0625 PF13276 XCV0625 XCV0625 PF13683 XCV0625 XCV0626 PF01527 Transposase XCV0627 PF00106 short chain dehydrogenase XCV0628 PF12833 Helix-turn-helix domain XCV0628 PF12852 Cupin XCV0629 PF01965 DJ-1/PfpI family XCV0635 PF00106 short chain dehydrogenase XCV0635 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0636 PF01145 SPFH domain / Band 7 family XCV0637 PF13409 Glutathione S-transferase, N-terminal domain XCV0637 PF13410 Glutathione S-transferase, C-terminal domain XCV0638 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV0640 PF00756 Putative esterase XCV0641 PF05708 Orthopoxvirus protein of unknown function (DUF830) XCV0642 PF00326 Prolyl oligopeptidase family XCV0642 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV0643 PF08887 XCV0643 XCV0644 PF07759 XCV0644 XCV0645 PF00990 GGDEF domain XCV0646 PF02082 Transcriptional regulator XCV0647 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV0651 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XCV0652 PF00892 EamA-like transporter family XCV0653 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCV0656 PF00324 Amino acid permease XCV0658 PF01544 CorA-like Mg2+ transporter protein XCV0659 PF01987 Mitochondrial biogenesis AIM24 XCV0660 PF01204 Trehalase XCV0661 PF01904 Protein of unknown function DUF72 XCV0662 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCV0662 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCV0665 PF01590 GAF domain XCV0666 PF00675 Insulinase (Peptidase family M16) XCV0666 PF05193 Peptidase M16 inactive domain XCV0667 PF00990 GGDEF domain XCV0667 PF01590 GAF domain XCV0667 PF08447 PAS fold XCV0667 PF08448 PAS fold XCV0669 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV0669 PF00672 HAMP domain XCV0669 PF17200 XCV0669 XCV0670 PF00150 Cellulase (glycosyl hydrolase family 5) XCV0670 PF00553 Cellulose binding domain XCV0671 PF00916 XCV0671 XCV0671 PF01740 STAS domain XCV0672 PF00990 GGDEF domain XCV0673 PF02225 PA domain XCV0673 PF04389 Peptidase family M28 XCV0675 PF13632 Glycosyl transferase family group 2 XCV0676 PF02230 Phospholipase/Carboxylesterase XCV0677 PF06580 XCV0677 XCV0678 PF00072 Response regulator receiver domain XCV0678 PF04397 LytTr DNA-binding domain XCV0679 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XCV0679 PF03900 Porphobilinogen deaminase, C-terminal domain XCV0680 PF04338 Protein of unknown function, DUF481 XCV0681 PF08279 HTH domain XCV0681 PF13280 XCV0681 XCV0683 PF08212 Lipocalin-like domain XCV0685 PF00326 Prolyl oligopeptidase family XCV0685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCV0686 PF00155 Aminotransferase class I and II XCV0687 PF00326 Prolyl oligopeptidase family XCV0687 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCV0688 PF04304 XCV0688 XCV0689 PF01678 Diaminopimelate epimerase XCV0690 PF04340 Protein of unknown function, DUF484 XCV0691 PF00589 Phage integrase family XCV0691 PF02899 Phage integrase, N-terminal SAM-like domain XCV0692 PF00227 Proteasome subunit XCV0693 PF00004 ATPase family associated with various cellular activities (AAA) XCV0693 PF07724 AAA domain (Cdc48 subfamily) XCV0693 PF10431 C-terminal, D2-small domain, of ClpB protein XCV0694 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCV0695 PF13673 Acetyltransferase (GNAT) domain XCV0696 PF16576 XCV0696 XCV0697 PF07690 Major Facilitator Superfamily XCV0698 PF01209 ubiE/COQ5 methyltransferase family XCV0699 PF00990 GGDEF domain XCV0700 PF01433 Peptidase family M1 XCV0700 PF09127 Leukotriene A4 hydrolase, C-terminal XCV0702 PF00702 haloacid dehalogenase-like hydrolase XCV0705 PF00665 Integrase core domain XCV0705 PF13276 XCV0705 XCV0706 PF01527 Transposase XCV0708 PF13360 PQQ-like domain XCV0709 PF01011 PQQ enzyme repeat XCV0710 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCV0710 PF12796 Ankyrin repeats (3 copies) XCV0710 PF13857 Ankyrin repeats (many copies) XCV0711 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCV0712 PF10282 Lactonase, 7-bladed beta-propeller XCV0713 PF00107 Zinc-binding dehydrogenase XCV0713 PF08240 Alcohol dehydrogenase GroES-like domain XCV0714 PF00593 TonB dependent receptor XCV0714 PF07715 TonB-dependent Receptor Plug Domain XCV0715 PF00158 Sigma-54 interaction domain XCV0715 PF01590 GAF domain XCV0715 PF02954 Bacterial regulatory protein, Fis family XCV0716 PF00294 pfkB family carbohydrate kinase XCV0717 PF06723 MreB/Mbl protein XCV0718 PF04085 rod shape-determining protein MreC XCV0719 PF04093 XCV0719 XCV0720 PF00905 Penicillin binding protein transpeptidase domain XCV0720 PF03717 Penicillin-binding Protein dimerisation domain XCV0721 PF01098 XCV0721 XCV0722 PF00295 Glycosyl hydrolases family 28 XCV0723 PF13406 Transglycosylase SLT domain XCV0724 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XCV0724 PF05036 Sporulation related domain XCV0725 PF00768 D-alanyl-D-alanine carboxypeptidase XCV0725 PF07943 Penicillin-binding protein 5, C-terminal domain XCV0726 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) XCV0727 PF04359 Protein of unknown function (DUF493) XCV0728 PF03099 Biotin/lipoate A/B protein ligase family XCV0729 PF04055 Radical SAM superfamily XCV0729 PF16881 XCV0729 XCV0730 PF00595 PDZ domain (Also known as DHR or GLGF) XCV0730 PF03572 Peptidase family S41 XCV0730 PF11818 XCV0730 XCV0731 PF01925 XCV0731 XCV0732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0732 PF03466 LysR substrate binding domain XCV0733 PF03372 Endonuclease/Exonuclease/phosphatase family XCV0734 PF00293 NUDIX domain XCV0734 PF01467 Cytidylyltransferase XCV0735 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XCV0737 PF01555 DNA methylase XCV0738 PF10001 XCV0738 XCV0739 PF05433 XCV0739 XCV0741 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XCV0741 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCV0742 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCV0742 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XCV0743 PF04972 BON domain XCV0744 PF00512 His Kinase A (phospho-acceptor) domain XCV0744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0744 PF05227 CHASE3 domain XCV0744 PF08448 PAS fold XCV0745 PF00072 Response regulator receiver domain XCV0746 PF00072 Response regulator receiver domain XCV0746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0747 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCV0748 PF13561 Enoyl-(Acyl carrier protein) reductase XCV0749 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase XCV0751 PF00593 TonB dependent receptor XCV0751 PF07715 TonB-dependent Receptor Plug Domain XCV0752 PF13640 2OG-Fe(II) oxygenase superfamily XCV0754 PF00593 TonB dependent receptor XCV0754 PF07715 TonB-dependent Receptor Plug Domain XCV0755 PF11356 Type IV pilus biogenesis XCV0755 PF13180 PDZ domain XCV0756 PF00263 XCV0756 XCV0756 PF03958 Bacterial type II/III secretion system short domain XCV0757 PF00437 Type II/IV secretion system protein XCV0758 PF00482 Type II secretion system (T2SS), protein F XCV0759 PF07963 Prokaryotic N-terminal methylation motif XCV0759 PF08334 Type II secretion system (T2SS), protein G XCV0760 PF07963 Prokaryotic N-terminal methylation motif XCV0760 PF12019 Type II transport protein GspH XCV0761 PF02501 Type II secretion system (T2SS), protein I XCV0761 PF07963 Prokaryotic N-terminal methylation motif XCV0762 PF07963 Prokaryotic N-terminal methylation motif XCV0762 PF11612 Type II secretion system (T2SS), protein J XCV0763 PF03934 Type II secretion system (T2SS), protein K XCV0764 PF05134 Type II secretion system (T2SS), protein L XCV0765 PF04612 Type II secretion system (T2SS), protein M XCV0766 PF01203 XCV0766 XCV0767 PF00392 Bacterial regulatory proteins, gntR family XCV0767 PF07702 UTRA domain XCV0768 PF07690 Major Facilitator Superfamily XCV0769 PF00356 Bacterial regulatory proteins, lacI family XCV0769 PF13377 Periplasmic binding protein-like domain XCV0770 PF01380 SIS domain XCV0771 PF01979 Amidohydrolase family XCV0772 PF00593 TonB dependent receptor XCV0772 PF07715 TonB-dependent Receptor Plug Domain XCV0773 PF01743 Poly A polymerase head domain XCV0773 PF01966 HD domain XCV0773 PF12627 Probable RNA and SrmB- binding site of polymerase A XCV0774 PF00732 GMC oxidoreductase XCV0774 PF05199 GMC oxidoreductase XCV0775 PF00171 Aldehyde dehydrogenase family XCV0776 PF02028 BCCT family transporter XCV0777 PF03372 Endonuclease/Exonuclease/phosphatase family XCV0778 PF01323 DSBA-like thioredoxin domain XCV0779 PF13462 Thioredoxin XCV0780 PF00034 Cytochrome c XCV0781 PF01926 50S ribosome-binding GTPase XCV0782 PF04107 Glutamate-cysteine ligase family 2(GCS2) XCV0783 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0784 PF00072 Response regulator receiver domain XCV0784 PF00486 Transcriptional regulatory protein, C terminal XCV0785 PF00534 Glycosyl transferases group 1 XCV0787 PF02583 Metal-sensitive transcriptional repressor XCV0788 PF00107 Zinc-binding dehydrogenase XCV0788 PF08240 Alcohol dehydrogenase GroES-like domain XCV0789 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCV0790 PF00756 Putative esterase XCV0792 PF00005 ABC transporter XCV0792 PF12848 ABC transporter XCV0793 PF11776 Domain of unknown function (DUF3315) XCV0794 PF00464 Serine hydroxymethyltransferase XCV0796 PF03477 ATP cone domain XCV0797 PF00583 Acetyltransferase (GNAT) family XCV0798 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCV0798 PF01872 RibD C-terminal domain XCV0800 PF00677 Lumazine binding domain XCV0801 PF00925 GTP cyclohydrolase II XCV0801 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XCV0802 PF00885 6,7-dimethyl-8-ribityllumazine synthase XCV0803 PF01029 NusB family XCV0804 PF00586 AIR synthase related protein, N-terminal domain XCV0804 PF02769 AIR synthase related protein, C-terminal domain XCV0805 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XCV0805 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCV0806 PF00646 F-box domain XCV0807 PF09604 XCV0807 XCV0808 PF03814 XCV0808 XCV0809 PF00122 E1-E2 ATPase XCV0809 PF00702 haloacid dehalogenase-like hydrolase XCV0810 PF02669 XCV0810 XCV0811 PF00512 His Kinase A (phospho-acceptor) domain XCV0811 PF00582 Universal stress protein family XCV0811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0811 PF02702 Osmosensitive K+ channel His kinase sensor domain XCV0811 PF13493 Domain of unknown function (DUF4118) XCV0812 PF00072 Response regulator receiver domain XCV0812 PF00486 Transcriptional regulatory protein, C terminal XCV0814 PF01565 FAD binding domain XCV0814 PF02913 FAD linked oxidases, C-terminal domain XCV0815 PF04307 XCV0815 XCV0816 PF02021 Uncharacterised protein family UPF0102 XCV0817 PF04348 LppC putative lipoprotein XCV0818 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCV0819 PF01845 CcdB protein XCV0820 PF07362 Post-segregation antitoxin CcdA XCV0821 PF05742 XCV0821 XCV0822 PF02381 MraZ protein XCV0823 PF01795 MraW methylase family XCV0824 PF04999 XCV0824 XCV0825 PF00905 Penicillin binding protein transpeptidase domain XCV0825 PF03717 Penicillin-binding Protein dimerisation domain XCV0826 PF01225 Mur ligase family, catalytic domain XCV0826 PF02875 Mur ligase family, glutamate ligase domain XCV0826 PF08245 Mur ligase middle domain XCV0827 PF01225 Mur ligase family, catalytic domain XCV0827 PF02875 Mur ligase family, glutamate ligase domain XCV0827 PF08245 Mur ligase middle domain XCV0828 PF00953 Glycosyl transferase family 4 XCV0829 PF01098 XCV0829 XCV0830 PF03033 Glycosyltransferase family 28 N-terminal domain XCV0830 PF04101 Glycosyltransferase family 28 C-terminal domain XCV0831 PF01225 Mur ligase family, catalytic domain XCV0831 PF02875 Mur ligase family, glutamate ligase domain XCV0831 PF08245 Mur ligase middle domain XCV0832 PF01820 D-ala D-ala ligase N-terminus XCV0832 PF07478 D-ala D-ala ligase C-terminus XCV0833 PF03799 Cell division protein FtsQ XCV0833 PF08478 POTRA domain, FtsQ-type XCV0834 PF02491 SHS2 domain inserted in FTSA XCV0834 PF14450 Cell division protein FtsA XCV0835 PF00091 Tubulin/FtsZ family, GTPase domain XCV0835 PF12327 FtsZ family, C-terminal domain XCV0836 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XCV0837 PF05258 XCV0837 XCV0838 PF01551 Peptidase family M23 XCV0839 PF01043 SecA preprotein cross-linking domain XCV0839 PF02810 SEC-C motif XCV0839 PF07516 SecA Wing and Scaffold domain XCV0839 PF07517 SecA DEAD-like domain XCV0840 PF00293 NUDIX domain XCV0840 PF02581 Thiamine monophosphate synthase/TENI XCV0842 PF02219 Methylenetetrahydrofolate reductase XCV0843 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCV0844 PF00107 Zinc-binding dehydrogenase XCV0844 PF08240 Alcohol dehydrogenase GroES-like domain XCV0845 PF00082 Subtilase family XCV0845 PF09286 Pro-kumamolisin, activation domain XCV0846 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV0847 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCV0850 PF00128 Alpha amylase, catalytic domain XCV0851 PF09831 XCV0851 XCV0852 PF11539 Protein of unknown function (DUF3228) XCV0854 PF00685 Sulfotransferase domain XCV0855 PF13649 Methyltransferase domain XCV0856 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCV0856 PF05221 S-adenosyl-L-homocysteine hydrolase XCV0857 PF00326 Prolyl oligopeptidase family XCV0858 PF00311 Phosphoenolpyruvate carboxylase XCV0859 PF00440 Bacterial regulatory proteins, tetR family XCV0860 PF13387 XCV0860 XCV0862 PF00691 OmpA family XCV0863 PF00593 TonB dependent receptor XCV0863 PF07715 TonB-dependent Receptor Plug Domain XCV0864 PF00328 Histidine phosphatase superfamily (branch 2) XCV0865 PF00438 S-adenosylmethionine synthetase, N-terminal domain XCV0865 PF02772 S-adenosylmethionine synthetase, central domain XCV0865 PF02773 S-adenosylmethionine synthetase, C-terminal domain XCV0866 PF04307 XCV0866 XCV0867 PF08241 Methyltransferase domain XCV0868 PF01207 Dihydrouridine synthase (Dus) XCV0869 PF08306 Glycosyl hydrolase family 98 XCV0869 PF08307 Glycosyl hydrolase family 98 C-terminal domain XCV0869 PF16990 XCV0869 XCV0870 PF00294 pfkB family carbohydrate kinase XCV0871 PF01773 Na+ dependent nucleoside transporter N-terminus XCV0871 PF07662 Na+ dependent nucleoside transporter C-terminus XCV0871 PF07670 Nucleoside recognition XCV0873 PF00248 Aldo/keto reductase family XCV0874 PF10636 Hemin uptake protein hemP XCV0875 PF00593 TonB dependent receptor XCV0875 PF07715 TonB-dependent Receptor Plug Domain XCV0879 PF04342 XCV0879 XCV0880 PF00528 Binding-protein-dependent transport system inner membrane component XCV0881 PF00005 ABC transporter XCV0882 PF13379 NMT1-like family XCV0883 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XCV0884 PF02687 XCV0884 XCV0885 PF00005 ABC transporter XCV0886 PF13472 GDSL-like Lipase/Acylhydrolase family XCV0887 PF00072 Response regulator receiver domain XCV0887 PF00486 Transcriptional regulatory protein, C terminal XCV0888 PF00512 His Kinase A (phospho-acceptor) domain XCV0888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0889 PF13472 GDSL-like Lipase/Acylhydrolase family XCV0890 PF01219 Prokaryotic diacylglycerol kinase XCV0891 PF04011 LemA family XCV0892 PF04536 TLP18 XCV0893 PF04536 TLP18 XCV0894 PF01790 XCV0894 XCV0895 PF00303 Thymidylate synthase XCV0897 PF00186 Dihydrofolate reductase XCV0898 PF00149 Calcineurin-like phosphoesterase XCV0899 PF04379 Protein of unknown function (DUF525) XCV0900 PF00398 Ribosomal RNA adenine dimethylase XCV0901 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XCV0902 PF00639 PPIC-type PPIASE domain XCV0902 PF09312 SurA N-terminal domain XCV0902 PF13616 PPIC-type PPIASE domain XCV0903 PF03968 OstA-like protein XCV0903 PF04453 Organic solvent tolerance protein XCV0904 PF00850 Histone deacetylase domain XCV0905 PF01923 Cobalamin adenosyltransferase XCV0907 PF01494 FAD binding domain XCV0908 PF01494 FAD binding domain XCV0909 PF12697 Alpha/beta hydrolase family XCV0910 PF13577 SnoaL-like domain XCV0911 PF13557 XCV0911 XCV0912 PF00392 Bacterial regulatory proteins, gntR family XCV0912 PF07729 FCD domain XCV0913 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCV0914 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XCV0915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0915 PF03466 LysR substrate binding domain XCV0916 PF00501 AMP-binding enzyme XCV0916 PF13193 AMP-binding enzyme C-terminal domain XCV0917 PF00171 Aldehyde dehydrogenase family XCV0918 PF00378 Enoyl-CoA hydratase/isomerase family XCV0919 PF12802 MarR family XCV0920 PF13202 EF hand XCV0922 PF08450 SMP-30/Gluconolaconase/LRE-like region XCV0923 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCV0924 PF01728 FtsJ-like methyltransferase XCV0925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCV0930 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCV0930 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XCV0931 PF13409 Glutathione S-transferase, N-terminal domain XCV0932 PF09413 Domain of unknown function (DUF2007) XCV0933 PF00072 Response regulator receiver domain XCV0934 PF00072 Response regulator receiver domain XCV0934 PF00512 His Kinase A (phospho-acceptor) domain XCV0934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV0934 PF05227 CHASE3 domain XCV0935 PF00196 Bacterial regulatory proteins, luxR family XCV0936 PF08332 Calcium/calmodulin dependent protein kinase II Association XCV0937 PF01625 Peptide methionine sulfoxide reductase XCV0938 PF01965 DJ-1/PfpI family XCV0939 PF00923 Transaldolase XCV0940 PF01272 Transcription elongation factor, GreA/GreB, C-term XCV0940 PF14760 Rnk N-terminus XCV0941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV0941 PF03466 LysR substrate binding domain XCV0942 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV0942 PF13192 Thioredoxin domain XCV0943 PF00578 AhpC/TSA family XCV0943 PF10417 C-terminal domain of 1-Cys peroxiredoxin XCV0944 PF05175 Methyltransferase small domain XCV0945 PF00561 alpha/beta hydrolase fold XCV0946 PF05013 N-formylglutamate amidohydrolase XCV0947 PF00293 NUDIX domain XCV0948 PF01367 5'-3' exonuclease, C-terminal SAM fold XCV0948 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCV0949 PF00881 Nitroreductase family XCV0950 PF07793 XCV0950 XCV0951 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XCV0951 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XCV0952 PF11304 XCV0952 XCV0954 PF04542 Sigma-70 region 2 XCV0954 PF08281 Sigma-70, region 4 XCV0955 PF02233 NAD(P) transhydrogenase beta subunit XCV0957 PF01883 Domain of unknown function DUF59 XCV0958 PF01063 Aminotransferase class IV XCV0959 PF00082 Subtilase family XCV0959 PF04151 Bacterial pre-peptidase C-terminal domain XCV0960 PF00082 Subtilase family XCV0961 PF00082 Subtilase family XCV0961 PF04151 Bacterial pre-peptidase C-terminal domain XCV0962 PF04073 Aminoacyl-tRNA editing domain XCV0963 PF00710 Asparaginase XCV0965 PF02055 O-Glycosyl hydrolase family 30 XCV0965 PF17189 XCV0965 XCV0966 PF09842 XCV0966 XCV0967 PF03358 NADPH-dependent FMN reductase XCV0968 PF03631 XCV0968 XCV0969 PF00578 AhpC/TSA family XCV0970 PF00708 Acylphosphatase XCV0972 PF03976 Polyphosphate kinase 2 (PPK2) XCV0973 PF00994 Probable molybdopterin binding domain XCV0974 PF13844 Glycosyl transferase family 41 XCV0974 PF14559 Tetratricopeptide repeat XCV0975 PF00472 RF-1 domain XCV0975 PF03462 PCRF domain XCV0976 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XCV0976 PF01488 Shikimate / quinate 5-dehydrogenase XCV0976 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XCV0977 PF13429 Tetratricopeptide repeat XCV0978 PF03550 Outer membrane lipoprotein LolB XCV0979 PF00288 GHMP kinases N terminal domain XCV0979 PF08544 GHMP kinases C terminal XCV0980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XCV0980 PF14572 Phosphoribosyl synthetase-associated domain XCV0981 PF01386 Ribosomal L25p family XCV0981 PF14693 Ribosomal protein TL5, C-terminal domain XCV0982 PF01195 Peptidyl-tRNA hydrolase XCV0983 PF01926 50S ribosome-binding GTPase XCV0983 PF06071 Protein of unknown function (DUF933) XCV0984 PF00009 Elongation factor Tu GTP binding domain XCV0984 PF03143 Elongation factor Tu C-terminal domain XCV0984 PF03144 Elongation factor Tu domain 2 XCV0985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XCV0986 PF00467 KOW motif XCV0986 PF02357 Transcription termination factor nusG XCV0987 PF00298 Ribosomal protein L11, RNA binding domain XCV0987 PF03946 Ribosomal protein L11, N-terminal domain XCV0988 PF00687 Ribosomal protein L1p/L10e family XCV0989 PF00466 Ribosomal protein L10 XCV0990 PF00542 Ribosomal protein L7/L12 C-terminal domain XCV0990 PF16320 XCV0990 XCV0991 PF00562 RNA polymerase Rpb2, domain 6 XCV0991 PF04560 RNA polymerase Rpb2, domain 7 XCV0991 PF04561 RNA polymerase Rpb2, domain 2 XCV0991 PF04563 RNA polymerase beta subunit XCV0991 PF04565 RNA polymerase Rpb2, domain 3 XCV0991 PF10385 RNA polymerase beta subunit external 1 domain XCV0992 PF00623 RNA polymerase Rpb1, domain 2 XCV0992 PF04983 RNA polymerase Rpb1, domain 3 XCV0992 PF04997 RNA polymerase Rpb1, domain 1 XCV0992 PF04998 RNA polymerase Rpb1, domain 5 XCV0992 PF05000 RNA polymerase Rpb1, domain 4 XCV0993 PF00164 Ribosomal protein S12/S23 XCV0994 PF00177 Ribosomal protein S7p/S5e XCV0995 PF00009 Elongation factor Tu GTP binding domain XCV0995 PF00679 Elongation factor G C-terminus XCV0995 PF03144 Elongation factor Tu domain 2 XCV0995 PF03764 Elongation factor G, domain IV XCV0995 PF14492 Elongation Factor G, domain II XCV0996 PF00009 Elongation factor Tu GTP binding domain XCV0996 PF03143 Elongation factor Tu C-terminal domain XCV0996 PF03144 Elongation factor Tu domain 2 XCV0998 PF00338 Ribosomal protein S10p/S20e XCV0999 PF00297 Ribosomal protein L3 XCV1000 PF00573 Ribosomal protein L4/L1 family XCV1001 PF00276 Ribosomal protein L23 XCV1002 PF00181 Ribosomal Proteins L2, RNA binding domain XCV1002 PF03947 Ribosomal Proteins L2, C-terminal domain XCV1003 PF00203 Ribosomal protein S19 XCV1004 PF00237 Ribosomal protein L22p/L17e XCV1005 PF00189 Ribosomal protein S3, C-terminal domain XCV1005 PF07650 KH domain XCV1006 PF00252 Ribosomal protein L16p/L10e XCV1007 PF00831 Ribosomal L29 protein XCV1008 PF00366 Ribosomal protein S17 XCV1009 PF00238 Ribosomal protein L14p/L23e XCV1010 PF00467 KOW motif XCV1010 PF17136 XCV1010 XCV1011 PF00281 Ribosomal protein L5 XCV1011 PF00673 ribosomal L5P family C-terminus XCV1012 PF00253 Ribosomal protein S14p/S29e XCV1013 PF00410 Ribosomal protein S8 XCV1014 PF00347 Ribosomal protein L6 XCV1015 PF00861 Ribosomal L18p/L5e family XCV1016 PF00333 Ribosomal protein S5, N-terminal domain XCV1016 PF03719 Ribosomal protein S5, C-terminal domain XCV1017 PF00327 Ribosomal protein L30p/L7e XCV1018 PF00828 Ribosomal protein L18e/L15 XCV1019 PF00344 SecY translocase XCV1020 PF00416 Ribosomal protein S13/S18 XCV1021 PF00411 Ribosomal protein S11 XCV1022 PF00163 Ribosomal protein S4/S9 N-terminal domain XCV1022 PF01479 S4 domain XCV1023 PF01000 RNA polymerase Rpb3/RpoA insert domain XCV1023 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XCV1023 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XCV1024 PF01196 Ribosomal protein L17 XCV1026 PF02600 Disulfide bond formation protein DsbB XCV1027 PF00593 TonB dependent receptor XCV1027 PF07715 TonB-dependent Receptor Plug Domain XCV1028 PF01474 Class-II DAHP synthetase family XCV1029 PF00924 Mechanosensitive ion channel XCV1030 PF01425 Amidase XCV1031 PF09900 XCV1031 XCV1032 PF00009 Elongation factor Tu GTP binding domain XCV1032 PF00679 Elongation factor G C-terminus XCV1032 PF03144 Elongation factor Tu domain 2 XCV1033 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XCV1034 PF00056 lactate/malate dehydrogenase, NAD binding domain XCV1034 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XCV1035 PF00043 Glutathione S-transferase, C-terminal domain XCV1035 PF02798 Glutathione S-transferase, N-terminal domain XCV1036 PF07486 Cell Wall Hydrolase XCV1039 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCV1039 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV1040 PF13602 Zinc-binding dehydrogenase XCV1041 PF00107 Zinc-binding dehydrogenase XCV1041 PF08240 Alcohol dehydrogenase GroES-like domain XCV1042 PF00691 OmpA family XCV1042 PF13505 Outer membrane protein beta-barrel domain XCV1044 PF00849 RNA pseudouridylate synthase XCV1044 PF01479 S4 domain XCV1045 PF01844 HNH endonuclease XCV1046 PF00155 Aminotransferase class I and II XCV1047 PF13531 Bacterial extracellular solute-binding protein XCV1048 PF00528 Binding-protein-dependent transport system inner membrane component XCV1049 PF00528 Binding-protein-dependent transport system inner membrane component XCV1050 PF00005 ABC transporter XCV1050 PF12857 XCV1050 XCV1051 PF09694 XCV1051 XCV1052 PF00107 Zinc-binding dehydrogenase XCV1052 PF08240 Alcohol dehydrogenase GroES-like domain XCV1053 PF00593 TonB dependent receptor XCV1053 PF07715 TonB-dependent Receptor Plug Domain XCV1054 PF04185 Phosphoesterase family XCV1054 PF05506 XCV1054 XCV1056 PF10459 Peptidase S46 XCV1057 PF00300 Histidine phosphatase superfamily (branch 1) XCV1058 PF02875 Mur ligase family, glutamate ligase domain XCV1058 PF08245 Mur ligase middle domain XCV1059 PF05036 Sporulation related domain XCV1060 PF02674 XCV1060 XCV1061 PF13522 Glutamine amidotransferase domain XCV1062 PF04305 XCV1062 XCV1064 PF13688 Metallo-peptidase family M12 XCV1066 PF00149 Calcineurin-like phosphoesterase XCV1067 PF01569 PAP2 superfamily XCV1068 PF00534 Glycosyl transferases group 1 XCV1068 PF13439 Glycosyltransferase Family 4 XCV1069 PF02541 Ppx/GppA phosphatase family XCV1070 PF02503 Polyphosphate kinase middle domain XCV1070 PF13089 Polyphosphate kinase N-terminal domain XCV1070 PF13090 Polyphosphate kinase C-terminal domain XCV1071 PF00512 His Kinase A (phospho-acceptor) domain XCV1071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1071 PF11808 XCV1071 XCV1072 PF00072 Response regulator receiver domain XCV1072 PF00486 Transcriptional regulatory protein, C terminal XCV1073 PF01435 Peptidase family M48 XCV1074 PF00462 Glutaredoxin XCV1075 PF02627 Carboxymuconolactone decarboxylase family XCV1076 PF00180 Isocitrate/isopropylmalate dehydrogenase XCV1077 PF12811 XCV1077 XCV1079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1079 PF08448 PAS fold XCV1080 PF05697 Bacterial trigger factor protein (TF) XCV1080 PF05698 Bacterial trigger factor protein (TF) C-terminus XCV1081 PF00574 Clp protease XCV1082 PF06689 ClpX C4-type zinc finger XCV1082 PF07724 AAA domain (Cdc48 subfamily) XCV1082 PF10431 C-terminal, D2-small domain, of ClpB protein XCV1083 PF00004 ATPase family associated with various cellular activities (AAA) XCV1083 PF02190 ATP-dependent protease La (LON) domain XCV1083 PF05362 Lon protease (S16) C-terminal proteolytic domain XCV1084 PF00216 Bacterial DNA-binding protein XCV1085 PF13145 PPIC-type PPIASE domain XCV1085 PF13616 PPIC-type PPIASE domain XCV1085 PF13623 XCV1085 XCV1086 PF01464 Transglycosylase SLT domain XCV1086 PF01476 LysM domain XCV1087 PF00753 Metallo-beta-lactamase superfamily XCV1087 PF16123 XCV1087 XCV1089 PF00075 RNase H XCV1090 PF00929 Exonuclease XCV1091 PF13672 Protein phosphatase 2C XCV1092 PF00589 Phage integrase family XCV1093 PF03389 MobA/MobL family XCV1094 PF06412 XCV1094 XCV1097 PF01527 Transposase XCV1098 PF13276 XCV1098 XCV1098 PF13683 XCV1098 XCV1100 PF13560 Helix-turn-helix domain XCV1102 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XCV1103 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family XCV1104 PF12706 Beta-lactamase superfamily domain XCV1105 PF04055 Radical SAM superfamily XCV1105 PF06463 Molybdenum Cofactor Synthesis C XCV1105 PF13353 4Fe-4S single cluster domain XCV1106 PF14534 Domain of unknown function (DUF4440) XCV1107 PF01967 MoaC family XCV1108 PF02597 ThiS family XCV1109 PF02391 MoaE protein XCV1110 PF01555 DNA methylase XCV1113 PF01527 Transposase XCV1114 PF13683 XCV1114 XCV1115 PF04002 RadC-like JAB domain XCV1118 PF01527 Transposase XCV1119 PF00665 Integrase core domain XCV1119 PF13276 XCV1119 XCV1123 PF03389 MobA/MobL family XCV1126 PF00589 Phage integrase family XCV1127 PF12169 DNA polymerase III subunits gamma and tau domain III XCV1127 PF12170 DNA polymerase III tau subunit V interacting with alpha XCV1127 PF13177 DNA polymerase III, delta subunit XCV1128 PF02575 YbaB/EbfC DNA-binding family XCV1129 PF02132 RecR protein XCV1129 PF13662 Toprim domain XCV1130 PF01230 HIT domain XCV1131 PF03843 XCV1131 XCV1132 PF01841 Transglutaminase-like superfamily XCV1132 PF11992 XCV1132 XCV1133 PF01882 XCV1133 XCV1134 PF07726 ATPase family associated with various cellular activities (AAA) XCV1135 PF13231 XCV1135 XCV1137 PF02545 Maf-like protein XCV1138 PF01527 Transposase XCV1139 PF13683 XCV1139 XCV1140 PF02545 Maf-like protein XCV1141 PF02620 XCV1141 XCV1142 PF01783 Ribosomal L32p protein family XCV1143 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCV1143 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCV1144 PF08670 XCV1144 XCV1145 PF00698 Acyl transferase domain XCV1146 PF13561 Enoyl-(Acyl carrier protein) reductase XCV1147 PF00550 Phosphopantetheine attachment site XCV1148 PF00109 Beta-ketoacyl synthase, N-terminal domain XCV1148 PF02801 Beta-ketoacyl synthase, C-terminal domain XCV1149 PF00425 chorismate binding enzyme XCV1150 PF02618 YceG-like family XCV1151 PF13177 DNA polymerase III, delta subunit XCV1152 PF07238 PilZ domain XCV1155 PF00158 Sigma-54 interaction domain XCV1155 PF02954 Bacterial regulatory protein, Fis family XCV1155 PF06506 Propionate catabolism activator XCV1156 PF13714 Phosphoenolpyruvate phosphomutase XCV1157 PF00285 Citrate synthase XCV1158 PF00330 Aconitase family (aconitate hydratase) XCV1158 PF00694 Aconitase C-terminal domain XCV1160 PF04303 PrpF protein XCV1161 PF00593 TonB dependent receptor XCV1161 PF07715 TonB-dependent Receptor Plug Domain XCV1162 PF01156 Inosine-uridine preferring nucleoside hydrolase XCV1164 PF00207 Alpha-2-macroglobulin family XCV1164 PF01835 MG2 domain XCV1164 PF07703 Alpha-2-macroglobulin family N-terminal region XCV1164 PF11974 Alpha-2-macroglobulin MG1 domain XCV1165 PF00593 TonB dependent receptor XCV1165 PF07715 TonB-dependent Receptor Plug Domain XCV1166 PF03009 Glycerophosphoryl diester phosphodiesterase family XCV1166 PF16387 XCV1166 XCV1168 PF00905 Penicillin binding protein transpeptidase domain XCV1168 PF00912 Transglycosylase XCV1168 PF06832 XCV1168 XCV1169 PF00210 Ferritin-like domain XCV1170 PF08534 Redoxin XCV1172 PF00011 Hsp20/alpha crystallin family XCV1173 PF00226 DnaJ domain XCV1173 PF01556 DnaJ C terminal domain XCV1174 PF00072 Response regulator receiver domain XCV1175 PF01145 SPFH domain / Band 7 family XCV1176 PF01145 SPFH domain / Band 7 family XCV1177 PF01797 Transposase IS200 like XCV1178 PF00709 Adenylosuccinate synthetase XCV1179 PF01433 Peptidase family M1 XCV1179 PF11838 ERAP1-like C-terminal domain XCV1181 PF13561 Enoyl-(Acyl carrier protein) reductase XCV1182 PF00440 Bacterial regulatory proteins, tetR family XCV1189 PF05016 Plasmid stabilisation system protein XCV1190 PF04471 Restriction endonuclease XCV1191 PF02384 N-6 DNA Methylase XCV1191 PF12161 HsdM N-terminal domain XCV1192 PF13310 XCV1192 XCV1193 PF01420 Type I restriction modification DNA specificity domain XCV1194 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XCV1194 PF04851 Type III restriction enzyme, res subunit XCV1196 PF00069 Protein kinase domain XCV1199 PF00440 Bacterial regulatory proteins, tetR family XCV1200 PF00300 Histidine phosphatase superfamily (branch 1) XCV1201 PF01256 Carbohydrate kinase XCV1202 PF02055 O-Glycosyl hydrolase family 30 XCV1202 PF17189 XCV1202 XCV1203 PF00723 Glycosyl hydrolases family 15 XCV1204 PF13561 Enoyl-(Acyl carrier protein) reductase XCV1205 PF07971 Glycosyl hydrolase family 92 XCV1206 PF00106 short chain dehydrogenase XCV1207 PF13532 2OG-Fe(II) oxygenase superfamily XCV1208 PF00027 Cyclic nucleotide-binding domain XCV1208 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV1209 PF02148 Zn-finger in ubiquitin-hydrolases and other protein XCV1210 PF00563 EAL domain XCV1211 PF13328 HD domain XCV1213 PF00005 ABC transporter XCV1214 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCV1214 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCV1215 PF00941 FAD binding domain in molybdopterin dehydrogenase XCV1215 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCV1216 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV1216 PF01799 [2Fe-2S] binding domain XCV1217 PF05559 XCV1217 XCV1219 PF07883 Cupin domain XCV1221 PF02661 Fic/DOC family XCV1222 PF04014 Antidote-toxin recognition MazE XCV1223 PF00717 Peptidase S24-like XCV1223 PF01726 LexA DNA binding domain XCV1225 PF00817 impB/mucB/samB family XCV1226 PF02811 PHP domain XCV1226 PF07733 Bacterial DNA polymerase III alpha subunit XCV1226 PF14579 Helix-hairpin-helix motif XCV1227 PF00326 Prolyl oligopeptidase family XCV1228 PF08668 HDOD domain XCV1230 PF03169 XCV1230 XCV1231 PF13557 XCV1231 XCV1232 PF00326 Prolyl oligopeptidase family XCV1232 PF07676 WD40-like Beta Propeller Repeat XCV1235 PF08448 PAS fold XCV1235 PF12833 Helix-turn-helix domain XCV1240 PF00199 Catalase XCV1240 PF06628 Catalase-related immune-responsive XCV1241 PF00248 Aldo/keto reductase family XCV1242 PF00135 Carboxylesterase family XCV1243 PF02347 Glycine cleavage system P-protein XCV1244 PF13469 Sulfotransferase family XCV1245 PF13437 HlyD family secretion protein XCV1245 PF13533 Biotin-lipoyl like XCV1246 PF00005 ABC transporter XCV1246 PF00664 ABC transporter transmembrane region XCV1246 PF03412 Peptidase C39 family XCV1247 PF07690 Major Facilitator Superfamily XCV1249 PF01401 Angiotensin-converting enzyme XCV1250 PF00884 Sulfatase XCV1250 PF08019 XCV1250 XCV1251 PF01569 PAP2 superfamily XCV1252 PF13231 XCV1252 XCV1253 PF00072 Response regulator receiver domain XCV1253 PF00486 Transcriptional regulatory protein, C terminal XCV1254 PF00512 His Kinase A (phospho-acceptor) domain XCV1254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1256 PF03776 Septum formation topological specificity factor MinE XCV1257 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCV1258 PF03775 Septum formation inhibitor MinC, C-terminal domain XCV1258 PF05209 Septum formation inhibitor MinC, N-terminal domain XCV1259 PF00583 Acetyltransferase (GNAT) family XCV1260 PF07730 Histidine kinase XCV1261 PF00072 Response regulator receiver domain XCV1261 PF00196 Bacterial regulatory proteins, luxR family XCV1262 PF10604 Polyketide cyclase / dehydrase and lipid transport XCV1263 PF04241 XCV1263 XCV1264 PF00730 HhH-GPD superfamily base excision DNA repair protein XCV1265 PF02557 D-alanyl-D-alanine carboxypeptidase XCV1268 PF01145 SPFH domain / Band 7 family XCV1269 PF02222 ATP-grasp domain XCV1272 PF03372 Endonuclease/Exonuclease/phosphatase family XCV1273 PF04376 XCV1273 XCV1273 PF04377 XCV1273 XCV1274 PF13202 EF hand XCV1274 PF13499 EF-hand domain pair XCV1276 PF04542 Sigma-70 region 2 XCV1276 PF08281 Sigma-70, region 4 XCV1277 PF09413 Domain of unknown function (DUF2007) XCV1278 PF02551 Acyl-CoA thioesterase XCV1279 PF13622 Thioesterase-like superfamily XCV1280 PF00378 Enoyl-CoA hydratase/isomerase family XCV1281 PF04314 Protein of unknown function (DUF461) XCV1282 PF13279 Thioesterase-like superfamily XCV1283 PF00005 ABC transporter XCV1284 PF00829 Ribosomal prokaryotic L21 protein XCV1285 PF01016 Ribosomal L27 protein XCV1286 PF01018 GTP1/OBG XCV1286 PF01926 50S ribosome-binding GTPase XCV1287 PF01649 Ribosomal protein S20 XCV1288 PF03023 XCV1288 XCV1289 PF01687 Riboflavin kinase XCV1289 PF06574 FAD synthetase XCV1290 PF00133 tRNA synthetases class I (I, L, M and V) XCV1290 PF06827 Zinc finger found in FPG and IleRS XCV1290 PF08264 Anticodon-binding domain of tRNA XCV1291 PF01252 XCV1291 XCV1292 PF02401 LytB protein XCV1294 PF01609 Transposase DDE domain XCV1294 PF05598 XCV1294 XCV1296 PF00665 Integrase core domain XCV1297 PF01527 Transposase XCV1298 PF14891 Effector protein XCV1300 PF13276 XCV1300 XCV1300 PF13683 XCV1300 XCV1301 PF01527 Transposase XCV1306 PF00589 Phage integrase family XCV1307 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCV1307 PF06481 COX Aromatic Rich Motif XCV1308 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCV1309 PF00510 Cytochrome c oxidase subunit III XCV1310 PF03626 XCV1310 XCV1311 PF05299 M61 glycyl aminopeptidase XCV1311 PF07720 Tetratricopeptide repeat XCV1312 PF13481 AAA domain XCV1312 PF13541 Subunit ChlI of Mg-chelatase XCV1313 PF05656 XCV1313 XCV1314 PF00486 Transcriptional regulatory protein, C terminal XCV1315 PF12833 Helix-turn-helix domain XCV1316 PF00183 Hsp90 protein XCV1316 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1319 PF01740 STAS domain XCV1319 PF14361 XCV1319 XCV1321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1322 PF07228 Stage II sporulation protein E (SpoIIE) XCV1322 PF13581 Histidine kinase-like ATPase domain XCV1323 PF00512 His Kinase A (phospho-acceptor) domain XCV1323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1324 PF00072 Response regulator receiver domain XCV1324 PF00512 His Kinase A (phospho-acceptor) domain XCV1324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1324 PF08448 PAS fold XCV1325 PF04616 Glycosyl hydrolases family 43 XCV1326 PF00593 TonB dependent receptor XCV1326 PF07715 TonB-dependent Receptor Plug Domain XCV1327 PF00085 Thioredoxin XCV1328 PF07237 Protein of unknown function (DUF1428) XCV1329 PF00072 Response regulator receiver domain XCV1329 PF00512 His Kinase A (phospho-acceptor) domain XCV1329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1330 PF01339 CheB methylesterase XCV1331 PF01739 CheR methyltransferase, SAM binding domain XCV1331 PF03705 CheR methyltransferase, all-alpha domain XCV1332 PF00072 Response regulator receiver domain XCV1332 PF00512 His Kinase A (phospho-acceptor) domain XCV1332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1332 PF13185 GAF domain XCV1333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1333 PF13426 PAS domain XCV1334 PF00072 Response regulator receiver domain XCV1335 PF06964 Alpha-L-arabinofuranosidase C-terminus XCV1336 PF01263 Aldose 1-epimerase XCV1337 PF01578 XCV1337 XCV1338 PF00448 SRP54-type protein, GTPase domain XCV1338 PF02881 SRP54-type protein, helical bundle domain XCV1338 PF02978 Signal peptide binding domain XCV1339 PF03060 Nitronate monooxygenase XCV1341 PF01063 Aminotransferase class IV XCV1342 PF00886 Ribosomal protein S16 XCV1343 PF01782 RimM N-terminal domain XCV1343 PF05239 PRC-barrel domain XCV1344 PF01746 tRNA (Guanine-1)-methyltransferase XCV1345 PF01245 Ribosomal protein L19 XCV1346 PF01554 MatE XCV1347 PF08279 HTH domain XCV1347 PF13280 XCV1347 XCV1348 PF00043 Glutathione S-transferase, C-terminal domain XCV1348 PF13417 Glutathione S-transferase, N-terminal domain XCV1349 PF01479 S4 domain XCV1350 PF00141 Peroxidase XCV1351 PF06078 Bacterial protein of unknown function (DUF937) XCV1352 PF00488 MutS domain V XCV1352 PF01624 MutS domain I XCV1352 PF05188 MutS domain II XCV1352 PF05190 MutS family domain IV XCV1352 PF05192 MutS domain III XCV1353 PF05593 XCV1353 XCV1354 PF05593 XCV1354 XCV1355 PF13683 XCV1355 XCV1356 PF01527 Transposase XCV1357 PF00754 F5/8 type C domain XCV1357 PF01120 Alpha-L-fucosidase XCV1359 PF00703 Glycosyl hydrolases family 2 XCV1359 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCV1359 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCV1359 PF16355 XCV1359 XCV1360 PF07745 Glycosyl hydrolase family 53 XCV1361 PF00593 TonB dependent receptor XCV1361 PF07715 TonB-dependent Receptor Plug Domain XCV1362 PF06114 Domain of unknown function (DUF955) XCV1362 PF09856 XCV1362 XCV1362 PF13560 Helix-turn-helix domain XCV1363 PF00171 Aldehyde dehydrogenase family XCV1364 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV1364 PF02770 Acyl-CoA dehydrogenase, middle domain XCV1364 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV1365 PF00378 Enoyl-CoA hydratase/isomerase family XCV1366 PF16113 XCV1366 XCV1367 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCV1367 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCV1368 PF01545 Cation efflux family XCV1369 PF00378 Enoyl-CoA hydratase/isomerase family XCV1369 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCV1369 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCV1370 PF04542 Sigma-70 region 2 XCV1370 PF08281 Sigma-70, region 4 XCV1371 PF03872 Anti sigma-E protein RseA, N-terminal domain XCV1372 PF13180 PDZ domain XCV1372 PF13365 Trypsin-like peptidase domain XCV1373 PF00009 Elongation factor Tu GTP binding domain XCV1373 PF00679 Elongation factor G C-terminus XCV1373 PF03144 Elongation factor Tu domain 2 XCV1373 PF06421 GTP-binding protein LepA C-terminus XCV1374 PF00717 Peptidase S24-like XCV1375 PF16137 XCV1375 XCV1376 PF00035 Double-stranded RNA binding motif XCV1376 PF14622 Ribonuclease-III-like XCV1377 PF01926 50S ribosome-binding GTPase XCV1377 PF07650 KH domain XCV1379 PF02565 Recombination protein O C terminal XCV1379 PF11967 Recombination protein O N terminal XCV1380 PF00072 Response regulator receiver domain XCV1380 PF01627 Hpt domain XCV1381 PF05958 tRNA (Uracil-5-)-methyltransferase XCV1382 PF01928 CYTH domain XCV1383 PF01323 DSBA-like thioredoxin domain XCV1384 PF13450 NAD(P)-binding Rossmann-like domain XCV1385 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XCV1386 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV1387 PF00156 Phosphoribosyl transferase domain XCV1388 PF01048 Phosphorylase superfamily XCV1389 PF00313 'Cold-shock' DNA-binding domain XCV1390 PF01494 FAD binding domain XCV1392 PF00149 Calcineurin-like phosphoesterase XCV1393 PF00270 DEAD/DEAH box helicase XCV1393 PF00271 Helicase conserved C-terminal domain XCV1393 PF08494 XCV1393 XCV1394 PF01068 ATP dependent DNA ligase domain XCV1394 PF04675 DNA ligase N terminus XCV1394 PF04679 ATP dependent DNA ligase C terminal region XCV1397 PF04519 XCV1397 XCV1398 PF00990 GGDEF domain XCV1398 PF05227 CHASE3 domain XCV1398 PF13185 GAF domain XCV1401 PF00108 Thiolase, N-terminal domain XCV1401 PF02803 Thiolase, C-terminal domain XCV1402 PF00082 Subtilase family XCV1402 PF03797 Autotransporter beta-domain XCV1402 PF12951 XCV1402 XCV1403 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCV1403 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XCV1404 PF13640 2OG-Fe(II) oxygenase superfamily XCV1405 PF01863 Protein of unknown function DUF45 XCV1406 PF07043 XCV1406 XCV1407 PF10982 Protein of unknown function (DUF2789) XCV1408 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCV1409 PF00924 Mechanosensitive ion channel XCV1411 PF00012 Hsp70 protein XCV1413 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCV1414 PF01545 Cation efflux family XCV1415 PF03831 PhnA protein XCV1415 PF08274 PhnA Zinc-Ribbon XCV1417 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCV1418 PF07690 Major Facilitator Superfamily XCV1420 PF09537 Domain of unknown function (DUF2383) XCV1421 PF13563 2'-5' RNA ligase superfamily XCV1423 PF09791 XCV1423 XCV1424 PF06057 Bacterial virulence protein (VirJ) XCV1425 PF09924 Uncharacterized conserved protein (DUF2156) XCV1426 PF06197 XCV1426 XCV1427 PF01042 Endoribonuclease L-PSP XCV1428 PF02353 Mycolic acid cyclopropane synthetase XCV1429 PF06966 XCV1429 XCV1430 PF11086 XCV1430 XCV1431 PF02353 Mycolic acid cyclopropane synthetase XCV1432 PF07103 XCV1432 XCV1433 PF01593 Flavin containing amine oxidoreductase XCV1434 PF00487 XCV1434 XCV1435 PF10099 XCV1435 XCV1436 PF04542 Sigma-70 region 2 XCV1436 PF08281 Sigma-70, region 4 XCV1439 PF04060 Putative Fe-S cluster XCV1439 PF14697 4Fe-4S dicluster domain XCV1440 PF12710 haloacid dehalogenase-like hydrolase XCV1441 PF01588 Putative tRNA binding domain XCV1441 PF09334 tRNA synthetases class I (M) XCV1442 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) XCV1445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV1448 PF00324 Amino acid permease XCV1449 PF02574 Homocysteine S-methyltransferase XCV1450 PF05960 Bacterial protein of unknown function (DUF885) XCV1451 PF02592 XCV1451 XCV1452 PF04367 XCV1452 XCV1454 PF13372 Alginate export XCV1455 PF03551 Transcriptional regulator PadR-like family XCV1456 PF13796 XCV1456 XCV1457 PF06850 XCV1457 XCV1458 PF13489 Methyltransferase domain XCV1459 PF03653 XCV1459 XCV1461 PF14559 Tetratricopeptide repeat XCV1462 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XCV1463 PF01336 OB-fold nucleic acid binding domain XCV1463 PF02811 PHP domain XCV1463 PF07733 Bacterial DNA polymerase III alpha subunit XCV1463 PF14579 Helix-hairpin-helix motif XCV1464 PF01351 Ribonuclease HII XCV1465 PF02684 XCV1465 XCV1466 PF00132 Bacterial transferase hexapeptide (six repeats) XCV1466 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XCV1467 PF07977 FabA-like domain XCV1468 PF00132 Bacterial transferase hexapeptide (six repeats) XCV1468 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XCV1470 PF01103 Surface antigen XCV1470 PF07244 Surface antigen variable number repeat XCV1471 PF02163 Peptidase family M50 XCV1472 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XCV1472 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal XCV1472 PF13288 DXP reductoisomerase C-terminal domain XCV1473 PF01148 Cytidylyltransferase family XCV1474 PF01255 Putative undecaprenyl diphosphate synthase XCV1475 PF01765 Ribosome recycling factor XCV1476 PF00696 Amino acid kinase family XCV1477 PF00990 GGDEF domain XCV1477 PF08668 HDOD domain XCV1478 PF00889 Elongation factor TS XCV1479 PF00318 Ribosomal protein S2 XCV1480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XCV1481 PF05229 XCV1481 XCV1482 PF00577 Outer membrane usher protein XCV1482 PF13953 PapC C-terminal domain XCV1483 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XCV1484 PF05229 XCV1484 XCV1485 PF00557 Metallopeptidase family M24 XCV1486 PF01909 Nucleotidyltransferase domain XCV1486 PF01966 HD domain XCV1486 PF08335 GlnD PII-uridylyltransferase XCV1487 PF00132 Bacterial transferase hexapeptide (six repeats) XCV1487 PF14602 Hexapeptide repeat of succinyl-transferase XCV1487 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XCV1488 PF03960 ArsC family XCV1489 PF01546 Peptidase family M20/M25/M40 XCV1489 PF07687 Peptidase dimerisation domain XCV1490 PF00733 Asparagine synthase XCV1490 PF13537 Glutamine amidotransferase domain XCV1491 PF13229 Right handed beta helix region XCV1492 PF00593 TonB dependent receptor XCV1493 PF07715 TonB-dependent Receptor Plug Domain XCV1494 PF01804 Penicillin amidase XCV1495 PF00210 Ferritin-like domain XCV1496 PF05724 Thiopurine S-methyltransferase (TPMT) XCV1497 PF00521 DNA gyrase/topoisomerase IV, subunit A XCV1497 PF03989 DNA gyrase C-terminal domain, beta-propeller XCV1498 PF02311 AraC-like ligand binding domain XCV1498 PF12833 Helix-turn-helix domain XCV1499 PF01047 MarR family XCV1500 PF02321 Outer membrane efflux protein XCV1501 PF00529 HlyD family secretion protein XCV1501 PF16576 XCV1501 XCV1502 PF07690 Major Facilitator Superfamily XCV1505 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV1505 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCV1505 PF14310 Fibronectin type III-like domain XCV1506 PF00246 Zinc carboxypeptidase XCV1507 PF00854 POT family XCV1508 PF01694 Rhomboid family XCV1510 PF14542 GCN5-related N-acetyl-transferase XCV1512 PF01047 MarR family XCV1513 PF01432 Peptidase family M3 XCV1514 PF00255 Glutathione peroxidase XCV1515 PF00175 Oxidoreductase NAD-binding domain XCV1515 PF00970 Oxidoreductase FAD-binding domain XCV1516 PF00005 ABC transporter XCV1517 PF05681 XCV1517 XCV1517 PF05683 Fumarase C-terminus XCV1518 PF02798 Glutathione S-transferase, N-terminal domain XCV1518 PF14497 Glutathione S-transferase, C-terminal domain XCV1519 PF00484 Carbonic anhydrase XCV1520 PF02253 Phospholipase A1 XCV1521 PF04306 XCV1521 XCV1522 PF00313 'Cold-shock' DNA-binding domain XCV1523 PF05433 XCV1523 XCV1524 PF01322 Cytochrome C' XCV1525 PF00899 ThiF family XCV1526 PF01026 TatD related DNase XCV1528 PF05433 XCV1528 XCV1529 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV1529 PF02770 Acyl-CoA dehydrogenase, middle domain XCV1529 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV1530 PF01841 Transglutaminase-like superfamily XCV1530 PF12969 Domain of Unknown Function with PDB structure (DUF3857) XCV1531 PF04893 XCV1531 XCV1532 PF00043 Glutathione S-transferase, C-terminal domain XCV1532 PF02798 Glutathione S-transferase, N-terminal domain XCV1533 PF00733 Asparagine synthase XCV1533 PF13537 Glutamine amidotransferase domain XCV1534 PF03358 NADPH-dependent FMN reductase XCV1535 PF00772 DnaB-like helicase N terminal domain XCV1535 PF03796 DnaB-like helicase C terminal domain XCV1536 PF00875 DNA photolyase XCV1536 PF03441 FAD binding domain of DNA photolyase XCV1537 PF00691 OmpA family XCV1537 PF13488 XCV1537 XCV1538 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV1538 PF03466 LysR substrate binding domain XCV1539 PF00106 short chain dehydrogenase XCV1540 PF16576 XCV1540 XCV1541 PF00873 AcrB/AcrD/AcrF family XCV1542 PF00106 short chain dehydrogenase XCV1543 PF02321 Outer membrane efflux protein XCV1544 PF00990 GGDEF domain XCV1546 PF00990 GGDEF domain XCV1546 PF05227 CHASE3 domain XCV1546 PF13185 GAF domain XCV1549 PF00733 Asparagine synthase XCV1550 PF01527 Transposase XCV1551 PF13276 XCV1551 XCV1551 PF13683 XCV1551 XCV1553 PF00589 Phage integrase family XCV1555 PF00082 Subtilase family XCV1556 PF01668 SmpB protein XCV1557 PF03364 Polyketide cyclase / dehydrase and lipid transport XCV1558 PF03658 RnfH family Ubiquitin XCV1559 PF04355 SmpA / OmlA family XCV1560 PF01475 Ferric uptake regulator family XCV1561 PF02463 RecF/RecN/SMC N terminal domain XCV1562 PF01628 HrcA protein C terminal domain XCV1562 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XCV1563 PF01025 GrpE XCV1564 PF00012 Hsp70 protein XCV1565 PF00226 DnaJ domain XCV1565 PF00684 DnaJ central domain XCV1565 PF01556 DnaJ C terminal domain XCV1566 PF08543 Phosphomethylpyrimidine kinase XCV1567 PF01842 ACT domain XCV1567 PF02153 Prephenate dehydrogenase XCV1569 PF02321 Outer membrane efflux protein XCV1570 PF16576 XCV1570 XCV1572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV1572 PF03466 LysR substrate binding domain XCV1573 PF00005 ABC transporter XCV1573 PF00664 ABC transporter transmembrane region XCV1574 PF01205 Uncharacterized protein family UPF0029 XCV1574 PF09186 Domain of unknown function (DUF1949) XCV1575 PF03641 Possible lysine decarboxylase XCV1576 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCV1576 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV1577 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCV1577 PF00364 Biotin-requiring enzyme XCV1577 PF02817 e3 binding domain XCV1578 PF00676 Dehydrogenase E1 component XCV1578 PF02779 Transketolase, pyrimidine binding domain XCV1578 PF16078 XCV1578 XCV1578 PF16870 XCV1578 XCV1579 PF13673 Acetyltransferase (GNAT) domain XCV1580 PF08007 Cupin superfamily protein XCV1581 PF11259 XCV1581 XCV1582 PF00206 Lyase XCV1582 PF08328 Adenylosuccinate lyase C-terminal XCV1583 PF00188 Cysteine-rich secretory protein family XCV1584 PF00571 CBS domain XCV1584 PF01595 XCV1584 XCV1584 PF03471 Transporter associated domain XCV1585 PF00206 Lyase XCV1585 PF10415 Fumarase C C-terminus XCV1587 PF11101 XCV1587 XCV1590 PF00005 ABC transporter XCV1591 PF00392 Bacterial regulatory proteins, gntR family XCV1592 PF00255 Glutathione peroxidase XCV1593 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCV1593 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCV1594 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCV1594 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCV1594 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCV1595 PF04102 SlyX XCV1596 PF09831 XCV1596 XCV1597 PF13557 XCV1597 XCV1598 PF00356 Bacterial regulatory proteins, lacI family XCV1598 PF13377 Periplasmic binding protein-like domain XCV1599 PF07690 Major Facilitator Superfamily XCV1600 PF00294 pfkB family carbohydrate kinase XCV1601 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) XCV1602 PF00809 Pterin binding enzyme XCV1602 PF02310 B12 binding domain XCV1602 PF02607 B12 binding domain XCV1602 PF02965 Vitamin B12 dependent methionine synthase, activation domain XCV1603 PF02574 Homocysteine S-methyltransferase XCV1604 PF01022 Bacterial regulatory protein, arsR family XCV1604 PF08241 Methyltransferase domain XCV1605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV1605 PF02770 Acyl-CoA dehydrogenase, middle domain XCV1605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV1606 PF13472 GDSL-like Lipase/Acylhydrolase family XCV1607 PF00575 S1 RNA binding domain XCV1607 PF00773 RNB domain XCV1607 PF08206 Ribonuclease B OB domain XCV1608 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCV1609 PF00588 SpoU rRNA Methylase family XCV1609 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCV1610 PF00990 GGDEF domain XCV1610 PF07494 Two component regulator propeller XCV1610 PF07495 Y_Y_Y domain XCV1611 PF00929 Exonuclease XCV1612 PF11776 Domain of unknown function (DUF3315) XCV1613 PF01895 PhoU domain XCV1614 PF00005 ABC transporter XCV1615 PF00528 Binding-protein-dependent transport system inner membrane component XCV1616 PF00528 Binding-protein-dependent transport system inner membrane component XCV1617 PF12849 PBP superfamily domain XCV1618 PF12849 PBP superfamily domain XCV1619 PF07396 Phosphate-selective porin O and P XCV1621 PF00484 Carbonic anhydrase XCV1622 PF00916 XCV1622 XCV1623 PF00633 Helix-hairpin-helix motif XCV1623 PF00730 HhH-GPD superfamily base excision DNA repair protein XCV1625 PF00378 Enoyl-CoA hydratase/isomerase family XCV1626 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCV1626 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCV1627 PF00293 NUDIX domain XCV1627 PF06945 XCV1627 XCV1628 PF00581 Rhodanese-like domain XCV1629 PF07920 Protein of unknown function (DUF1684) XCV1630 PF01510 N-acetylmuramoyl-L-alanine amidase XCV1631 PF03473 MOSC domain XCV1633 PF00583 Acetyltransferase (GNAT) family XCV1634 PF00005 ABC transporter XCV1635 PF01170 Putative RNA methylase family UPF0020 XCV1635 PF02926 THUMP domain XCV1635 PF10672 S-adenosylmethionine-dependent methyltransferase XCV1636 PF01513 ATP-NAD kinase XCV1637 PF06189 XCV1637 XCV1638 PF11159 XCV1638 XCV1639 PF09365 XCV1639 XCV1640 PF00929 Exonuclease XCV1640 PF08411 Exonuclease C-terminal XCV1641 PF01494 FAD binding domain XCV1642 PF00266 Aminotransferase class-V XCV1643 PF13515 XCV1643 XCV1644 PF12805 XCV1644 XCV1645 PF06052 3-hydroxyanthranilic acid dioxygenase XCV1646 PF00484 Carbonic anhydrase XCV1647 PF05838 Glycosyl hydrolase 108 XCV1647 PF09374 Predicted Peptidoglycan domain XCV1648 PF11655 XCV1648 XCV1649 PF11655 XCV1649 XCV1654 PF00072 Response regulator receiver domain XCV1654 PF00196 Bacterial regulatory proteins, luxR family XCV1656 PF04299 Putative FMN-binding domain XCV1659 PF00152 tRNA synthetases class II (D, K and N) XCV1659 PF01336 OB-fold nucleic acid binding domain XCV1660 PF01521 Iron-sulphur cluster biosynthesis XCV1661 PF01250 Ribosomal protein S6 XCV1662 PF01084 Ribosomal protein S18 XCV1663 PF01281 Ribosomal protein L9, N-terminal domain XCV1663 PF03948 Ribosomal protein L9, C-terminal domain XCV1664 PF02463 RecF/RecN/SMC N terminal domain XCV1665 PF04354 ZipA, C-terminal FtsZ-binding domain XCV1667 PF00155 Aminotransferase class I and II XCV1668 PF00533 BRCA1 C Terminus (BRCT) domain XCV1668 PF01653 NAD-dependent DNA ligase adenylation domain XCV1668 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XCV1668 PF03120 NAD-dependent DNA ligase OB-fold domain XCV1668 PF12826 Helix-hairpin-helix motif XCV1669 PF00152 tRNA synthetases class II (D, K and N) XCV1670 PF11218 XCV1670 XCV1671 PF01008 Initiation factor 2 subunit family XCV1672 PF00521 DNA gyrase/topoisomerase IV, subunit A XCV1672 PF03989 DNA gyrase C-terminal domain, beta-propeller XCV1673 PF13360 PQQ-like domain XCV1676 PF01175 Urocanase XCV1676 PF17391 XCV1676 XCV1676 PF17392 XCV1676 XCV1677 PF05013 N-formylglutamate amidohydrolase XCV1678 PF00221 Aromatic amino acid lyase XCV1679 PF07969 Amidohydrolase family XCV1680 PF01979 Amidohydrolase family XCV1682 PF00392 Bacterial regulatory proteins, gntR family XCV1682 PF07702 UTRA domain XCV1683 PF04471 Restriction endonuclease XCV1684 PF05597 XCV1684 XCV1685 PF09650 XCV1685 XCV1686 PF16697 XCV1686 XCV1687 PF01794 XCV1687 XCV1688 PF00174 Oxidoreductase molybdopterin binding domain XCV1689 PF00266 Aminotransferase class-V XCV1690 PF00800 Prephenate dehydratase XCV1690 PF01817 Chorismate mutase type II XCV1690 PF01842 ACT domain XCV1691 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCV1692 PF03544 Gram-negative bacterial TonB protein C-terminal XCV1693 PF03544 Gram-negative bacterial TonB protein C-terminal XCV1694 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCV1694 PF02403 Seryl-tRNA synthetase N-terminal domain XCV1695 PF02525 Flavodoxin-like fold XCV1696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV1696 PF03466 LysR substrate binding domain XCV1697 PF00589 Phage integrase family XCV1698 PF01527 Transposase XCV1699 PF00665 Integrase core domain XCV1699 PF13276 XCV1699 XCV1700 PF01936 NYN domain XCV1700 PF12872 OST-HTH/LOTUS domain XCV1701 PF04343 XCV1701 XCV1702 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1702 PF12729 XCV1702 XCV1703 PF01494 FAD binding domain XCV1704 PF01047 MarR family XCV1705 PF00072 Response regulator receiver domain XCV1705 PF00512 His Kinase A (phospho-acceptor) domain XCV1705 PF00989 PAS fold XCV1705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1705 PF08447 PAS fold XCV1705 PF08448 PAS fold XCV1706 PF00072 Response regulator receiver domain XCV1707 PF06745 KaiC XCV1708 PF00072 Response regulator receiver domain XCV1708 PF00512 His Kinase A (phospho-acceptor) domain XCV1708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1708 PF08448 PAS fold XCV1710 PF03918 Cytochrome C biogenesis protein XCV1711 PF00578 AhpC/TSA family XCV1712 PF01578 XCV1712 XCV1712 PF16327 XCV1712 XCV1713 PF03100 CcmE XCV1714 PF04995 XCV1714 XCV1715 PF01578 XCV1715 XCV1716 PF00082 Subtilase family XCV1717 PF13490 Putative zinc-finger XCV1718 PF04542 Sigma-70 region 2 XCV1718 PF08281 Sigma-70, region 4 XCV1720 PF00034 Cytochrome c XCV1722 PF01292 Prokaryotic cytochrome b561 XCV1723 PF05523 WxcM-like, C-terminal XCV1724 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCV1725 PF01943 XCV1725 XCV1726 PF00535 Glycosyl transferase family 2 XCV1728 PF02706 Chain length determinant protein XCV1729 PF13649 Methyltransferase domain XCV1730 PF01979 Amidohydrolase family XCV1731 PF08241 Methyltransferase domain XCV1732 PF00534 Glycosyl transferases group 1 XCV1733 PF00534 Glycosyl transferases group 1 XCV1733 PF13579 Glycosyl transferase 4-like domain XCV1734 PF14907 Uncharacterised nucleotidyltransferase XCV1735 PF02310 B12 binding domain XCV1735 PF04055 Radical SAM superfamily XCV1737 PF00005 ABC transporter XCV1738 PF07690 Major Facilitator Superfamily XCV1739 PF00083 Sugar (and other) transporter XCV1740 PF00296 Luciferase-like monooxygenase XCV1741 PF16242 XCV1741 XCV1742 PF06055 XCV1742 XCV1743 PF00571 CBS domain XCV1743 PF01595 XCV1743 XCV1743 PF03471 Transporter associated domain XCV1744 PF01865 Protein of unknown function DUF47 XCV1745 PF01384 XCV1745 XCV1746 PF02698 DUF218 domain XCV1747 PF00450 Serine carboxypeptidase XCV1748 PF00204 DNA gyrase B XCV1748 PF00986 DNA gyrase B subunit, carboxyl terminus XCV1748 PF01751 Toprim domain XCV1748 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1749 PF00117 Glutamine amidotransferase class-I XCV1749 PF06418 CTP synthase N-terminus XCV1750 PF00793 DAHP synthetase I family XCV1752 PF00113 Enolase, C-terminal TIM barrel domain XCV1752 PF03952 Enolase, N-terminal domain XCV1753 PF04977 Septum formation initiator XCV1754 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XCV1755 PF02542 YgbB family XCV1756 PF01142 tRNA pseudouridine synthase D (TruD) XCV1757 PF01713 Smr domain XCV1758 PF01975 Survival protein SurE XCV1759 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XCV1760 PF09335 XCV1760 XCV1761 PF01476 LysM domain XCV1761 PF01551 Peptidase family M23 XCV1762 PF04430 Protein of unknown function (DUF498/DUF598) XCV1763 PF01985 CRS1 / YhbY (CRM) domain XCV1764 PF01728 FtsJ-like methyltransferase XCV1765 PF00004 ATPase family associated with various cellular activities (AAA) XCV1765 PF01434 Peptidase family M41 XCV1765 PF06480 FtsH Extracellular XCV1766 PF00809 Pterin binding enzyme XCV1767 PF01715 IPP transferase XCV1768 PF17209 XCV1768 XCV1769 PF01926 50S ribosome-binding GTPase XCV1769 PF13167 XCV1769 XCV1769 PF16360 XCV1769 XCV1770 PF02464 Competence-damaged protein XCV1771 PF03109 XCV1771 XCV1772 PF00717 Peptidase S24-like XCV1772 PF01726 LexA DNA binding domain XCV1773 PF00154 recA bacterial DNA recombination protein XCV1774 PF02631 RecX family XCV1775 PF01411 tRNA synthetases class II (A) XCV1775 PF02272 DHHA1 domain XCV1775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCV1776 PF02599 Global regulator protein family XCV1778 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1778 PF08447 PAS fold XCV1780 PF02678 Pirin XCV1781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV1781 PF03466 LysR substrate binding domain XCV1782 PF00581 Rhodanese-like domain XCV1782 PF09335 XCV1782 XCV1783 PF12146 Putative lysophospholipase XCV1784 PF08543 Phosphomethylpyrimidine kinase XCV1785 PF06912 XCV1785 XCV1787 PF02562 PhoH-like protein XCV1787 PF13638 PIN domain XCV1788 PF00578 AhpC/TSA family XCV1789 PF06877 Regulator of ribonuclease activity B XCV1790 PF13740 ACT domain XCV1791 PF00701 Dihydrodipicolinate synthetase family XCV1793 PF00037 4Fe-4S binding domain XCV1793 PF11953 Domain of unknown function (DUF3470) XCV1794 PF05035 2-keto-3-deoxy-galactonokinase XCV1795 PF08450 SMP-30/Gluconolaconase/LRE-like region XCV1796 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCV1796 PF13378 Enolase C-terminal domain-like XCV1797 PF01081 KDPG and KHG aldolase XCV1798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV1798 PF03466 LysR substrate binding domain XCV1799 PF07715 TonB-dependent Receptor Plug Domain XCV1800 PF00593 TonB dependent receptor XCV1801 PF00593 TonB dependent receptor XCV1801 PF07715 TonB-dependent Receptor Plug Domain XCV1802 PF15899 XCV1802 XCV1803 PF03629 Domain of unknown function (DUF303) XCV1803 PF13364 Beta-galactosidase jelly roll domain XCV1804 PF02449 Beta-galactosidase XCV1805 PF01055 Glycosyl hydrolases family 31 XCV1805 PF07691 PA14 domain XCV1805 PF16338 XCV1805 XCV1805 PF17137 XCV1805 XCV1806 PF14498 Glycosyl hydrolase family 65, N-terminal domain XCV1807 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCV1807 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCV1809 PF00083 Sugar (and other) transporter XCV1810 PF05231 XCV1810 XCV1812 PF01520 N-acetylmuramoyl-L-alanine amidase XCV1812 PF11741 AMIN domain XCV1813 PF02649 Type I GTP cyclohydrolase folE2 XCV1814 PF01743 Poly A polymerase head domain XCV1814 PF12626 Polymerase A arginine-rich C-terminus XCV1814 PF12627 Probable RNA and SrmB- binding site of polymerase A XCV1815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCV1816 PF02548 Ketopantoate hydroxymethyltransferase XCV1817 PF02569 Pantoate-beta-alanine ligase XCV1818 PF02261 Aspartate decarboxylase XCV1819 PF00342 Phosphoglucose isomerase XCV1820 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system XCV1822 PF05787 Bacterial protein of unknown function (DUF839) XCV1823 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV1823 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCV1824 PF00474 Sodium:solute symporter family XCV1825 PF00563 EAL domain XCV1825 PF00990 GGDEF domain XCV1825 PF01590 GAF domain XCV1826 PF00150 Cellulase (glycosyl hydrolase family 5) XCV1827 PF00072 Response regulator receiver domain XCV1827 PF02954 Bacterial regulatory protein, Fis family XCV1828 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1829 PF04551 GcpE protein XCV1830 PF01569 PAP2 superfamily XCV1831 PF07690 Major Facilitator Superfamily XCV1832 PF01177 Asp/Glu/Hydantoin racemase XCV1833 PF00892 EamA-like transporter family XCV1834 PF01565 FAD binding domain XCV1834 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XCV1835 PF01180 Dihydroorotate dehydrogenase XCV1836 PF08241 Methyltransferase domain XCV1837 PF13828 XCV1837 XCV1838 PF00171 Aldehyde dehydrogenase family XCV1840 PF13276 XCV1840 XCV1840 PF13683 XCV1840 XCV1841 PF01527 Transposase XCV1842 PF07690 Major Facilitator Superfamily XCV1843 PF01527 Transposase XCV1844 PF00665 Integrase core domain XCV1844 PF13276 XCV1844 XCV1846 PF13683 XCV1846 XCV1847 PF01527 Transposase XCV1848 PF00589 Phage integrase family XCV1849 PF13276 XCV1849 XCV1849 PF13683 XCV1849 XCV1850 PF13683 XCV1850 XCV1851 PF01527 Transposase XCV1856 PF02517 CAAX protease self-immunity XCV1858 PF06445 GyrI-like small molecule binding domain XCV1858 PF12833 Helix-turn-helix domain XCV1859 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XCV1859 PF08479 POTRA domain, ShlB-type XCV1859 PF17287 XCV1859 XCV1860 PF05594 XCV1860 XCV1860 PF05860 haemagglutination activity domain XCV1861 PF05594 XCV1861 XCV1861 PF13332 XCV1861 XCV1862 PF01527 Transposase XCV1863 PF13276 XCV1863 XCV1863 PF13683 XCV1863 XCV1865 PF03073 TspO/MBR family XCV1866 PF00696 Amino acid kinase family XCV1866 PF00742 Homoserine dehydrogenase XCV1866 PF03447 Homoserine dehydrogenase, NAD binding domain XCV1866 PF13840 ACT domain XCV1867 PF00288 GHMP kinases N terminal domain XCV1867 PF08544 GHMP kinases C terminal XCV1868 PF07110 EthD domain XCV1869 PF00291 Pyridoxal-phosphate dependent enzyme XCV1869 PF14821 Threonine synthase N terminus XCV1870 PF13645 XCV1870 XCV1871 PF00027 Cyclic nucleotide-binding domain XCV1871 PF13545 Crp-like helix-turn-helix domain XCV1872 PF03129 Anticodon binding domain XCV1872 PF13393 Histidyl-tRNA synthetase XCV1873 PF01371 Trp repressor protein XCV1874 PF01634 ATP phosphoribosyltransferase XCV1874 PF08029 HisG, C-terminal domain XCV1875 PF00815 Histidinol dehydrogenase XCV1876 PF00155 Aminotransferase class I and II XCV1877 PF00475 Imidazoleglycerol-phosphate dehydratase XCV1877 PF13242 HAD-hyrolase-like XCV1878 PF00117 Glutamine amidotransferase class-I XCV1879 PF00977 Histidine biosynthesis protein XCV1880 PF00977 Histidine biosynthesis protein XCV1881 PF01502 Phosphoribosyl-AMP cyclohydrolase XCV1881 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XCV1882 PF00149 Calcineurin-like phosphoesterase XCV1882 PF16370 XCV1882 XCV1882 PF16371 XCV1882 XCV1883 PF01650 Peptidase C13 family XCV1885 PF03079 ARD/ARD' family XCV1886 PF00596 Class II Aldolase and Adducin N-terminal domain XCV1887 PF13520 Amino acid permease XCV1888 PF13520 Amino acid permease XCV1889 PF00293 NUDIX domain XCV1890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCV1890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCV1891 PF01565 FAD binding domain XCV1891 PF02913 FAD linked oxidases, C-terminal domain XCV1892 PF09498 XCV1892 XCV1893 PF13387 XCV1893 XCV1895 PF01132 Elongation factor P (EF-P) OB domain XCV1895 PF08207 Elongation factor P (EF-P) KOW-like domain XCV1895 PF09285 Elongation factor P, C-terminal XCV1896 PF00106 short chain dehydrogenase XCV1897 PF00682 HMGL-like XCV1898 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV1899 PF00378 Enoyl-CoA hydratase/isomerase family XCV1900 PF04023 FeoA domain XCV1901 PF02421 Ferrous iron transport protein B XCV1901 PF07664 XCV1901 XCV1901 PF07670 Nucleoside recognition XCV1904 PF00155 Aminotransferase class I and II XCV1905 PF03473 MOSC domain XCV1905 PF03475 3-alpha domain XCV1906 PF01113 Dihydrodipicolinate reductase, N-terminus XCV1906 PF05173 Dihydrodipicolinate reductase, C-terminus XCV1907 PF00117 Glutamine amidotransferase class-I XCV1907 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XCV1909 PF02142 MGS-like domain XCV1909 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCV1909 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCV1910 PF01272 Transcription elongation factor, GreA/GreB, C-term XCV1910 PF03449 Transcription elongation factor, N-terminal XCV1912 PF01368 DHH family XCV1912 PF02272 DHHA1 domain XCV1913 PF01757 XCV1913 XCV1914 PF04397 LytTr DNA-binding domain XCV1915 PF00472 RF-1 domain XCV1915 PF03462 PCRF domain XCV1916 PF00152 tRNA synthetases class II (D, K and N) XCV1916 PF01336 OB-fold nucleic acid binding domain XCV1917 PF00072 Response regulator receiver domain XCV1917 PF01966 HD domain XCV1919 PF00072 Response regulator receiver domain XCV1919 PF00512 His Kinase A (phospho-acceptor) domain XCV1919 PF01627 Hpt domain XCV1919 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1920 PF00378 Enoyl-CoA hydratase/isomerase family XCV1921 PF00501 AMP-binding enzyme XCV1921 PF13193 AMP-binding enzyme C-terminal domain XCV1924 PF00330 Aconitase family (aconitate hydratase) XCV1924 PF00694 Aconitase C-terminal domain XCV1925 PF04014 Antidote-toxin recognition MazE XCV1926 PF01850 PIN domain XCV1927 PF00330 Aconitase family (aconitate hydratase) XCV1927 PF06434 Aconitate hydratase 2 N-terminus XCV1927 PF11791 Aconitate B N-terminal domain XCV1928 PF00561 alpha/beta hydrolase fold XCV1929 PF00563 EAL domain XCV1929 PF00990 GGDEF domain XCV1929 PF13185 GAF domain XCV1929 PF13426 PAS domain XCV1930 PF00072 Response regulator receiver domain XCV1930 PF01339 CheB methylesterase XCV1931 PF03975 CheD chemotactic sensory transduction XCV1932 PF01739 CheR methyltransferase, SAM binding domain XCV1932 PF03705 CheR methyltransferase, all-alpha domain XCV1933 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1933 PF00672 HAMP domain XCV1933 PF12729 XCV1933 XCV1935 PF01584 CheW-like domain XCV1936 PF07238 PilZ domain XCV1936 PF07317 Flagellar regulator YcgR XCV1938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1938 PF17201 XCV1938 XCV1939 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1939 PF00672 HAMP domain XCV1939 PF12729 XCV1939 XCV1940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1940 PF00672 HAMP domain XCV1940 PF12729 XCV1940 XCV1941 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1941 PF00672 HAMP domain XCV1942 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1942 PF12729 XCV1942 XCV1944 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1944 PF05227 CHASE3 domain XCV1945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1945 PF00672 HAMP domain XCV1945 PF12729 XCV1945 XCV1947 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1947 PF12729 XCV1947 XCV1948 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1950 PF13557 XCV1950 XCV1951 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1951 PF00672 HAMP domain XCV1951 PF02743 Cache domain XCV1952 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1952 PF17200 XCV1952 XCV1954 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1954 PF00672 HAMP domain XCV1954 PF12729 XCV1954 XCV1955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV1955 PF00672 HAMP domain XCV1955 PF12729 XCV1955 XCV1956 PF01584 CheW-like domain XCV1956 PF01627 Hpt domain XCV1956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1956 PF02895 Signal transducing histidine kinase, homodimeric domain XCV1957 PF00072 Response regulator receiver domain XCV1958 PF13466 STAS domain XCV1959 PF01584 CheW-like domain XCV1960 PF13614 AAA domain XCV1961 PF00691 OmpA family XCV1961 PF13677 XCV1961 XCV1962 PF01618 XCV1962 XCV1963 PF00593 TonB dependent receptor XCV1963 PF07715 TonB-dependent Receptor Plug Domain XCV1968 PF01527 Transposase XCV1969 PF13276 XCV1969 XCV1969 PF13683 XCV1969 XCV1971 PF08845 XCV1971 XCV1974 PF01584 CheW-like domain XCV1974 PF01627 Hpt domain XCV1974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV1974 PF02895 Signal transducing histidine kinase, homodimeric domain XCV1975 PF04344 Chemotaxis phosphatase, CheZ XCV1976 PF00072 Response regulator receiver domain XCV1977 PF04539 Sigma-70 region 3 XCV1977 PF04542 Sigma-70 region 2 XCV1977 PF04545 Sigma-70, region 4 XCV1978 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCV1979 PF00448 SRP54-type protein, GTPase domain XCV1980 PF00771 FHIPEP family XCV1981 PF01312 FlhB HrpN YscU SpaS Family XCV1982 PF00563 EAL domain XCV1982 PF00990 GGDEF domain XCV1982 PF03707 XCV1982 XCV1983 PF00990 GGDEF domain XCV1983 PF07495 Y_Y_Y domain XCV1985 PF00990 GGDEF domain XCV1985 PF07494 Two component regulator propeller XCV1985 PF07495 Y_Y_Y domain XCV1986 PF01311 XCV1986 XCV1987 PF01313 XCV1987 XCV1988 PF00813 XCV1988 XCV1989 PF04347 XCV1989 XCV1990 PF01052 Surface presentation of antigens (SPOA) XCV1991 PF01052 Surface presentation of antigens (SPOA) XCV1991 PF02154 Flagellar motor switch protein FliM XCV1992 PF03748 XCV1992 XCV1993 PF02120 Flagellar hook-length control protein FliK XCV1994 PF02050 Flagellar FliJ protein XCV1995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCV1996 PF02108 XCV1996 XCV1997 PF01706 FliG C-terminal domain XCV1997 PF14841 FliG middle domain XCV1997 PF14842 FliG N-terminal domain XCV1998 PF01514 Secretory protein of YscJ/FliF family XCV1998 PF08345 XCV1998 XCV1999 PF02049 XCV1999 XCV2000 PF00535 Glycosyl transferase family 2 XCV2002 PF05050 Methyltransferase FkbM domain XCV2003 PF02348 Cytidylyltransferase XCV2005 PF05050 Methyltransferase FkbM domain XCV2006 PF00132 Bacterial transferase hexapeptide (six repeats) XCV2007 PF00355 Rieske [2Fe-2S] domain XCV2007 PF00848 Ring hydroxylating alpha subunit (catalytic domain) XCV2008 PF00132 Bacterial transferase hexapeptide (six repeats) XCV2009 PF13561 Enoyl-(Acyl carrier protein) reductase XCV2010 PF13561 Enoyl-(Acyl carrier protein) reductase XCV2011 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCV2011 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCV2013 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCV2014 PF00158 Sigma-54 interaction domain XCV2014 PF02954 Bacterial regulatory protein, Fis family XCV2014 PF06490 XCV2014 XCV2015 PF00072 Response regulator receiver domain XCV2016 PF00309 XCV2016 XCV2016 PF04552 Sigma-54, DNA binding domain XCV2016 PF04963 Sigma-54 factor, core binding domain XCV2017 PF00072 Response regulator receiver domain XCV2017 PF00196 Bacterial regulatory proteins, luxR family XCV2018 PF16823 XCV2018 XCV2020 PF02561 Flagellar protein FliS XCV2021 PF02465 XCV2021 XCV2021 PF07195 XCV2021 XCV2021 PF07196 Flagellin hook IN motif XCV2022 PF00669 Bacterial flagellin N-terminal helical region XCV2022 PF00700 Bacterial flagellin C-terminal helical region XCV2022 PF07196 Flagellin hook IN motif XCV2023 PF00669 Bacterial flagellin N-terminal helical region XCV2023 PF00700 Bacterial flagellin C-terminal helical region XCV2024 PF00460 Flagella basal body rod protein XCV2024 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCV2025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XCV2025 PF10135 XCV2025 XCV2026 PF02119 XCV2026 XCV2027 PF02107 XCV2027 XCV2028 PF00460 Flagella basal body rod protein XCV2028 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCV2029 PF00460 Flagella basal body rod protein XCV2029 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCV2030 PF00460 Flagella basal body rod protein XCV2030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCV2030 PF07559 Flagellar basal body protein FlaE XCV2031 PF03963 XCV2031 XCV2031 PF13860 FlgD Ig-like domain XCV2031 PF13861 FlgD Tudor-like domain XCV2032 PF00460 Flagella basal body rod protein XCV2032 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCV2033 PF00460 Flagella basal body rod protein XCV2034 PF00072 Response regulator receiver domain XCV2034 PF01584 CheW-like domain XCV2035 PF13144 SAF-like XCV2036 PF04316 Anti-sigma-28 factor, FlgM XCV2038 PF00512 His Kinase A (phospho-acceptor) domain XCV2038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2039 PF00072 Response regulator receiver domain XCV2039 PF00563 EAL domain XCV2039 PF00990 GGDEF domain XCV2040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2040 PF07730 Histidine kinase XCV2040 PF08448 PAS fold XCV2040 PF13426 PAS domain XCV2041 PF00563 EAL domain XCV2041 PF00990 GGDEF domain XCV2041 PF08447 PAS fold XCV2041 PF13426 PAS domain XCV2044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV2045 PF04356 Protein of unknown function (DUF489) XCV2046 PF03054 tRNA methyl transferase XCV2047 PF00293 NUDIX domain XCV2048 PF02617 ATP-dependent Clp protease adaptor protein ClpS XCV2049 PF00004 ATPase family associated with various cellular activities (AAA) XCV2049 PF02861 Clp amino terminal domain XCV2049 PF07724 AAA domain (Cdc48 subfamily) XCV2049 PF10431 C-terminal, D2-small domain, of ClpB protein XCV2051 PF01176 Translation initiation factor 1A / IF-1 XCV2052 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XCV2053 PF01370 NAD dependent epimerase/dehydratase family XCV2054 PF04339 XCV2054 XCV2055 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2056 PF01580 FtsK/SpoIIIE family XCV2056 PF09397 Ftsk gamma domain XCV2056 PF13491 XCV2056 XCV2057 PF01841 Transglutaminase-like superfamily XCV2057 PF12969 Domain of Unknown Function with PDB structure (DUF3857) XCV2058 PF03548 Outer membrane lipoprotein carrier protein LolA XCV2060 PF00004 ATPase family associated with various cellular activities (AAA) XCV2060 PF12002 MgsA AAA+ ATPase C terminal XCV2060 PF16193 XCV2060 XCV2061 PF02537 XCV2061 XCV2063 PF00108 Thiolase, N-terminal domain XCV2063 PF02803 Thiolase, C-terminal domain XCV2064 PF00378 Enoyl-CoA hydratase/isomerase family XCV2064 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCV2064 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCV2065 PF00440 Bacterial regulatory proteins, tetR family XCV2066 PF00334 Nucleoside diphosphate kinase XCV2067 PF04055 Radical SAM superfamily XCV2068 PF13432 Tetratricopeptide repeat XCV2069 PF13413 Helix-turn-helix domain XCV2069 PF13464 XCV2069 XCV2070 PF09976 Tetratricopeptide repeat XCV2071 PF13360 PQQ-like domain XCV2072 PF01926 50S ribosome-binding GTPase XCV2072 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XCV2073 PF00994 Probable molybdopterin binding domain XCV2073 PF03453 MoeA N-terminal region (domain I and II) XCV2073 PF03454 MoeA C-terminal region (domain IV) XCV2074 PF00581 Rhodanese-like domain XCV2074 PF00899 ThiF family XCV2075 PF00593 TonB dependent receptor XCV2075 PF07715 TonB-dependent Receptor Plug Domain XCV2077 PF13628 XCV2077 XCV2079 PF00107 Zinc-binding dehydrogenase XCV2079 PF08240 Alcohol dehydrogenase GroES-like domain XCV2079 PF13823 Alcohol dehydrogenase GroES-associated XCV2080 PF06884 XCV2080 XCV2081 PF03372 Endonuclease/Exonuclease/phosphatase family XCV2082 PF04193 PQ loop repeat XCV2083 PF00994 Probable molybdopterin binding domain XCV2083 PF03453 MoeA N-terminal region (domain I and II) XCV2083 PF03454 MoeA C-terminal region (domain IV) XCV2084 PF12804 MobA-like NTP transferase domain XCV2086 PF12625 XCV2086 XCV2086 PF12833 Helix-turn-helix domain XCV2087 PF00106 short chain dehydrogenase XCV2088 PF00743 Flavin-binding monooxygenase-like XCV2089 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCV2089 PF10414 Sirohaem synthase dimerisation region XCV2089 PF13241 Putative NAD(P)-binding XCV2089 PF14824 Sirohaem biosynthesis protein central XCV2090 PF00072 Response regulator receiver domain XCV2090 PF03861 ANTAR domain XCV2091 PF13379 NMT1-like family XCV2092 PF07690 Major Facilitator Superfamily XCV2093 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XCV2093 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XCV2093 PF04324 BFD-like [2Fe-2S] binding domain XCV2093 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2094 PF13806 Rieske-like [2Fe-2S] domain XCV2095 PF00384 Molybdopterin oxidoreductase XCV2095 PF01568 Molydopterin dinucleotide binding domain XCV2095 PF04324 BFD-like [2Fe-2S] binding domain XCV2095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XCV2096 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCV2097 PF10685 XCV2097 XCV2099 PF05974 Domain of unknown function (DUF892) XCV2100 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family XCV2101 PF07081 Protein of unknown function (DUF1349) XCV2102 PF00563 EAL domain XCV2103 PF12951 XCV2103 XCV2103 PF13018 XCV2103 XCV2104 PF00072 Response regulator receiver domain XCV2104 PF00196 Bacterial regulatory proteins, luxR family XCV2105 PF00512 His Kinase A (phospho-acceptor) domain XCV2105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2106 PF02321 Outer membrane efflux protein XCV2107 PF00873 AcrB/AcrD/AcrF family XCV2108 PF16576 XCV2108 XCV2109 PF00082 Subtilase family XCV2109 PF03797 Autotransporter beta-domain XCV2109 PF12951 XCV2109 XCV2111 PF06580 XCV2111 XCV2112 PF00072 Response regulator receiver domain XCV2112 PF04397 LytTr DNA-binding domain XCV2113 PF00144 Beta-lactamase XCV2115 PF07995 Glucose / Sorbosone dehydrogenase XCV2116 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCV2120 PF05591 XCV2120 XCV2121 PF05943 XCV2121 XCV2122 PF05638 Protein of unknown function (DUF796) XCV2123 PF07024 ImpE protein XCV2124 PF04965 Gene 25-like lysozyme XCV2125 PF05947 XCV2125 XCV2126 PF06996 XCV2126 XCV2127 PF00004 ATPase family associated with various cellular activities (AAA) XCV2127 PF07724 AAA domain (Cdc48 subfamily) XCV2127 PF10431 C-terminal, D2-small domain, of ClpB protein XCV2132 PF13676 TIR domain XCV2133 PF05954 Phage late control gene D protein (GPD) XCV2135 PF00498 FHA domain XCV2136 PF05936 XCV2136 XCV2137 PF00691 OmpA family XCV2137 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) XCV2138 PF06744 XCV2138 XCV2138 PF06761 XCV2138 XCV2138 PF14331 XCV2138 XCV2139 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) XCV2140 PF13672 Protein phosphatase 2C XCV2141 PF00069 Protein kinase domain XCV2141 PF03781 Sulfatase-modifying factor enzyme 1 XCV2143 PF06812 XCV2143 XCV2144 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2144 PF03466 LysR substrate binding domain XCV2145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2146 PF00034 Cytochrome c XCV2146 PF03150 Di-haem cytochrome c peroxidase XCV2147 PF00072 Response regulator receiver domain XCV2147 PF00486 Transcriptional regulatory protein, C terminal XCV2148 PF12697 Alpha/beta hydrolase family XCV2149 PF00732 GMC oxidoreductase XCV2149 PF05199 GMC oxidoreductase XCV2150 PF00067 Cytochrome P450 XCV2151 PF00196 Bacterial regulatory proteins, luxR family XCV2152 PF07495 Y_Y_Y domain XCV2152 PF07730 Histidine kinase XCV2153 PF00072 Response regulator receiver domain XCV2153 PF00196 Bacterial regulatory proteins, luxR family XCV2155 PF07495 Y_Y_Y domain XCV2155 PF07730 Histidine kinase XCV2156 PF03421 XCV2156 XCV2157 PF00665 Integrase core domain XCV2157 PF13276 XCV2157 XCV2158 PF01527 Transposase XCV2161 PF04610 XCV2161 XCV2162 PF12703 XCV2162 XCV2164 PF12728 Helix-turn-helix domain XCV2167 PF10544 XCV2167 XCV2169 PF04326 Divergent AAA domain XCV2169 PF13749 ATP-dependent DNA helicase recG C-terminal XCV2170 PF00107 Zinc-binding dehydrogenase XCV2170 PF08240 Alcohol dehydrogenase GroES-like domain XCV2171 PF03352 Methyladenine glycosylase XCV2172 PF13561 Enoyl-(Acyl carrier protein) reductase XCV2173 PF12680 SnoaL-like domain XCV2174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2174 PF03466 LysR substrate binding domain XCV2175 PF00248 Aldo/keto reductase family XCV2176 PF10070 XCV2176 XCV2177 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV2177 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCV2178 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2178 PF03466 LysR substrate binding domain XCV2179 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2179 PF14759 Reductase C-terminal XCV2180 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV2181 PF00067 Cytochrome P450 XCV2182 PF12833 Helix-turn-helix domain XCV2182 PF14525 XCV2182 XCV2183 PF03601 XCV2183 XCV2184 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2184 PF03466 LysR substrate binding domain XCV2186 PF17201 XCV2186 XCV2187 PF00072 Response regulator receiver domain XCV2187 PF00196 Bacterial regulatory proteins, luxR family XCV2188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2188 PF07495 Y_Y_Y domain XCV2188 PF07730 Histidine kinase XCV2189 PF12833 Helix-turn-helix domain XCV2190 PF00857 Isochorismatase family XCV2191 PF07681 XCV2191 XCV2192 PF07969 Amidohydrolase family XCV2193 PF05977 Transmembrane secretion effector XCV2196 PF00561 alpha/beta hydrolase fold XCV2197 PF01566 XCV2197 XCV2198 PF01325 Iron dependent repressor, N-terminal DNA binding domain XCV2198 PF02742 Iron dependent repressor, metal binding and dimerisation domain XCV2199 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCV2200 PF00929 Exonuclease XCV2201 PF00924 Mechanosensitive ion channel XCV2202 PF00391 PEP-utilising enzyme, mobile domain XCV2202 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XCV2202 PF02896 PEP-utilising enzyme, TIM barrel domain XCV2203 PF03618 XCV2203 XCV2204 PF06853 XCV2204 XCV2205 PF00293 NUDIX domain XCV2206 PF13561 Enoyl-(Acyl carrier protein) reductase XCV2207 PF01066 CDP-alcohol phosphatidyltransferase XCV2208 PF09712 XCV2208 XCV2209 PF00561 alpha/beta hydrolase fold XCV2210 PF04024 XCV2210 XCV2212 PF01266 FAD dependent oxidoreductase XCV2214 PF00575 S1 RNA binding domain XCV2214 PF09371 Tex-like protein N-terminal domain XCV2214 PF12836 Helix-hairpin-helix motif XCV2214 PF16921 XCV2214 XCV2215 PF00072 Response regulator receiver domain XCV2215 PF00512 His Kinase A (phospho-acceptor) domain XCV2215 PF01590 GAF domain XCV2215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2215 PF08447 PAS fold XCV2215 PF08448 PAS fold XCV2215 PF13185 GAF domain XCV2216 PF00072 Response regulator receiver domain XCV2217 PF00589 Phage integrase family XCV2217 PF13356 Domain of unknown function (DUF4102) XCV2219 PF05930 Prophage CP4-57 regulatory protein (AlpA) XCV2220 PF14090 XCV2220 XCV2228 PF00034 Cytochrome c XCV2229 PF00034 Cytochrome c XCV2230 PF00529 HlyD family secretion protein XCV2230 PF16576 XCV2230 XCV2231 PF00873 AcrB/AcrD/AcrF family XCV2232 PF00873 AcrB/AcrD/AcrF family XCV2233 PF01081 KDPG and KHG aldolase XCV2234 PF00920 Dehydratase family XCV2235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XCV2236 PF02685 Glucokinase XCV2237 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCV2237 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCV2238 PF00005 ABC transporter XCV2238 PF08402 TOBE domain XCV2239 PF01571 Aminomethyltransferase folate-binding domain XCV2239 PF08669 Glycine cleavage T-protein C-terminal barrel domain XCV2240 PF07896 Protein of unknown function (DUF1674) XCV2241 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCV2242 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCV2243 PF00890 FAD binding domain XCV2243 PF02910 Fumarate reductase flavoprotein C-term XCV2245 PF13085 2Fe-2S iron-sulfur cluster binding domain XCV2245 PF13534 4Fe-4S dicluster domain XCV2246 PF03937 Flavinator of succinate dehydrogenase XCV2248 PF02687 XCV2248 XCV2248 PF12704 MacB-like periplasmic core domain XCV2249 PF00005 ABC transporter XCV2250 PF01370 NAD dependent epimerase/dehydratase family XCV2251 PF00753 Metallo-beta-lactamase superfamily XCV2251 PF03772 XCV2251 XCV2251 PF13567 XCV2251 XCV2252 PF01618 XCV2252 XCV2253 PF02472 Biopolymer transport protein ExbD/TolR XCV2254 PF00005 ABC transporter XCV2254 PF00664 ABC transporter transmembrane region XCV2255 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XCV2256 PF02348 Cytidylyltransferase XCV2257 PF01451 Low molecular weight phosphotyrosine protein phosphatase XCV2258 PF01436 NHL repeat XCV2259 PF01541 GIY-YIG catalytic domain XCV2259 PF02151 UvrB/uvrC motif XCV2259 PF08459 UvrC Helix-hairpin-helix N-terminal XCV2260 PF01066 CDP-alcohol phosphatidyltransferase XCV2261 PF00589 Phage integrase family XCV2261 PF13356 Domain of unknown function (DUF4102) XCV2262 PF00665 Integrase core domain XCV2262 PF13276 XCV2262 XCV2263 PF01527 Transposase XCV2270 PF11679 XCV2270 XCV2271 PF12101 XCV2271 XCV2273 PF01526 XCV2273 XCV2273 PF13700 XCV2273 XCV2274 PF00589 Phage integrase family XCV2275 PF11740 XCV2275 XCV2278 PF13229 Right handed beta helix region XCV2278 PF16380 XCV2278 XCV2286 PF00145 C-5 cytosine-specific DNA methylase XCV2287 PF01131 DNA topoisomerase XCV2287 PF01396 XCV2287 XCV2287 PF01751 Toprim domain XCV2288 PF00436 Single-strand binding protein family XCV2289 PF11358 XCV2289 XCV2290 PF08900 XCV2290 XCV2292 PF11198 XCV2292 XCV2293 PF02195 ParB-like nuclease domain XCV2295 PF01527 Transposase XCV2296 PF00665 Integrase core domain XCV2296 PF13276 XCV2296 XCV2297 PF13683 XCV2297 XCV2298 PF00589 Phage integrase family XCV2298 PF13356 Domain of unknown function (DUF4102) XCV2298 PF14659 Phage integrase, N-terminal SAM-like domain XCV2299 PF03466 LysR substrate binding domain XCV2300 PF13560 Helix-turn-helix domain XCV2301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2301 PF03466 LysR substrate binding domain XCV2303 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCV2303 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2304 PF01925 XCV2304 XCV2305 PF03625 Domain of unknown function DUF302 XCV2306 PF13098 Thioredoxin-like domain XCV2307 PF01790 XCV2307 XCV2307 PF08534 Redoxin XCV2308 PF02683 XCV2308 XCV2308 PF11412 Disulphide bond corrector protein DsbC XCV2308 PF13899 Thioredoxin-like XCV2309 PF00072 Response regulator receiver domain XCV2309 PF00486 Transcriptional regulatory protein, C terminal XCV2310 PF00512 His Kinase A (phospho-acceptor) domain XCV2310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2310 PF08521 XCV2310 XCV2311 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2312 PF02627 Carboxymuconolactone decarboxylase family XCV2313 PF00085 Thioredoxin XCV2314 PF00581 Rhodanese-like domain XCV2314 PF12840 Helix-turn-helix domain XCV2315 PF01323 DSBA-like thioredoxin domain XCV2316 PF13483 Beta-lactamase superfamily domain XCV2317 PF02635 DsrE/DsrF-like family XCV2318 PF03595 Voltage-dependent anion channel XCV2319 PF00403 Heavy-metal-associated domain XCV2320 PF13610 XCV2320 XCV2321 PF13700 XCV2321 XCV2322 PF00665 Integrase core domain XCV2322 PF09299 Mu transposase, C-terminal XCV2322 PF13518 Helix-turn-helix domain XCV2323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2323 PF03466 LysR substrate binding domain XCV2324 PF03167 Uracil DNA glycosylase superfamily XCV2325 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase XCV2326 PF01636 Phosphotransferase enzyme family XCV2327 PF00239 Resolvase, N terminal domain XCV2329 PF13610 XCV2329 XCV2330 PF12973 ChrR Cupin-like domain XCV2331 PF01593 Flavin containing amine oxidoreductase XCV2332 PF00155 Aminotransferase class I and II XCV2333 PF00107 Zinc-binding dehydrogenase XCV2333 PF08240 Alcohol dehydrogenase GroES-like domain XCV2334 PF07690 Major Facilitator Superfamily XCV2335 PF00376 MerR family regulatory protein XCV2335 PF09278 MerR, DNA binding XCV2336 PF00122 E1-E2 ATPase XCV2336 PF00403 Heavy-metal-associated domain XCV2336 PF00702 haloacid dehalogenase-like hydrolase XCV2337 PF01022 Bacterial regulatory protein, arsR family XCV2338 PF01545 Cation efflux family XCV2339 PF07690 Major Facilitator Superfamily XCV2340 PF13610 XCV2340 XCV2341 PF06527 XCV2341 XCV2342 PF05621 XCV2342 XCV2343 PF00665 Integrase core domain XCV2343 PF09299 Mu transposase, C-terminal XCV2343 PF13518 Helix-turn-helix domain XCV2345 PF00145 C-5 cytosine-specific DNA methylase XCV2346 PF12833 Helix-turn-helix domain XCV2346 PF12852 Cupin XCV2347 PF02627 Carboxymuconolactone decarboxylase family XCV2348 PF16694 XCV2348 XCV2349 PF01526 XCV2349 XCV2350 PF07690 Major Facilitator Superfamily XCV2351 PF13276 XCV2351 XCV2351 PF13683 XCV2351 XCV2352 PF02627 Carboxymuconolactone decarboxylase family XCV2353 PF13610 XCV2353 XCV2354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2354 PF03466 LysR substrate binding domain XCV2355 PF02635 DsrE/DsrF-like family XCV2356 PF07514 Putative helicase XCV2356 PF07515 Protein of unknown function (DUF1528) XCV2358 PF08808 XCV2358 XCV2359 PF12553 XCV2359 XCV2360 PF07916 XCV2360 XCV2363 PF06834 XCV2363 XCV2364 PF07511 XCV2364 XCV2365 PF04002 RadC-like JAB domain XCV2366 PF13462 Thioredoxin XCV2367 PF11130 XCV2367 XCV2370 PF11920 XCV2370 XCV2371 PF11444 XCV2371 XCV2372 PF11990 XCV2372 XCV2373 PF11190 XCV2373 XCV2374 PF11660 XCV2374 XCV2375 PF09686 XCV2375 XCV2376 PF14348 XCV2376 XCV2377 PF12696 TraM recognition site of TraD and TraG XCV2378 PF11072 XCV2378 XCV2379 PF01464 Transglycosylase SLT domain XCV2384 PF00034 Cytochrome c XCV2384 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCV2386 PF00271 Helicase conserved C-terminal domain XCV2394 PF11679 XCV2394 XCV2395 PF12101 XCV2395 XCV2396 PF11284 XCV2396 XCV2405 PF00145 C-5 cytosine-specific DNA methylase XCV2406 PF01131 DNA topoisomerase XCV2406 PF01396 XCV2406 XCV2406 PF01751 Toprim domain XCV2407 PF00436 Single-strand binding protein family XCV2408 PF11358 XCV2408 XCV2409 PF08900 XCV2409 XCV2411 PF11198 XCV2411 XCV2412 PF02195 ParB-like nuclease domain XCV2414 PF13614 AAA domain XCV2415 PF05930 Prophage CP4-57 regulatory protein (AlpA) XCV2417 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCV2417 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCV2417 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCV2418 PF03486 HI0933-like protein XCV2419 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCV2421 PF00581 Rhodanese-like domain XCV2422 PF00072 Response regulator receiver domain XCV2422 PF00196 Bacterial regulatory proteins, luxR family XCV2423 PF00575 S1 RNA binding domain XCV2423 PF10150 Ribonuclease E/G family XCV2424 PF00849 RNA pseudouridylate synthase XCV2424 PF01479 S4 domain XCV2425 PF11737 XCV2425 XCV2426 PF02535 XCV2426 XCV2427 PF03544 Gram-negative bacterial TonB protein C-terminal XCV2428 PF01329 Pterin 4 alpha carbinolamine dehydratase XCV2429 PF01106 NifU-like domain XCV2432 PF00529 HlyD family secretion protein XCV2432 PF16576 XCV2432 XCV2433 PF00873 AcrB/AcrD/AcrF family XCV2434 PF05598 XCV2434 XCV2435 PF13419 Haloacid dehalogenase-like hydrolase XCV2436 PF12760 Transposase zinc-ribbon domain XCV2436 PF12762 XCV2436 XCV2437 PF11740 XCV2437 XCV2438 PF00589 Phage integrase family XCV2439 PF01526 XCV2439 XCV2439 PF13700 XCV2439 XCV2440 PF01471 Putative peptidoglycan binding domain XCV2440 PF13406 Transglycosylase SLT domain XCV2441 PF01925 XCV2441 XCV2442 PF04273 Putative phosphatase (DUF442) XCV2444 PF04143 XCV2444 XCV2445 PF00753 Metallo-beta-lactamase superfamily XCV2446 PF01022 Bacterial regulatory protein, arsR family XCV2448 PF07859 alpha/beta hydrolase fold XCV2449 PF12833 Helix-turn-helix domain XCV2449 PF12852 Cupin XCV2452 PF05857 XCV2452 XCV2453 PF05707 Zonular occludens toxin (Zot) XCV2454 PF10734 XCV2454 XCV2456 PF10389 Bacteriophage coat protein B XCV2461 PF12375 XCV2461 XCV2461 PF12472 XCV2461 XCV2463 PF05707 Zonular occludens toxin (Zot) XCV2468 PF17091 XCV2468 XCV2470 PF02303 Helix-destabilising protein XCV2471 PF11726 XCV2471 XCV2474 PF12472 XCV2474 XCV2476 PF01695 IstB-like ATP binding protein XCV2476 PF08483 XCV2476 XCV2477 PF01527 Transposase XCV2478 PF00665 Integrase core domain XCV2478 PF13276 XCV2478 XCV2479 PF06504 XCV2479 XCV2480 PF06504 XCV2480 XCV2481 PF13481 AAA domain XCV2483 PF05930 Prophage CP4-57 regulatory protein (AlpA) XCV2484 PF00589 Phage integrase family XCV2484 PF13356 Domain of unknown function (DUF4102) XCV2484 PF14659 Phage integrase, N-terminal SAM-like domain XCV2485 PF00117 Glutamine amidotransferase class-I XCV2485 PF00958 GMP synthase C terminal domain XCV2485 PF02540 NAD synthase XCV2486 PF00478 IMP dehydrogenase / GMP reductase domain XCV2486 PF00571 CBS domain XCV2487 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XCV2487 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XCV2488 PF06844 Protein of unknown function (DUF1244) XCV2489 PF00999 Sodium/hydrogen exchanger family XCV2489 PF02254 TrkA-N domain XCV2490 PF00483 Nucleotidyl transferase XCV2491 PF02719 Polysaccharide biosynthesis protein XCV2491 PF13727 CoA-binding domain XCV2492 PF00953 Glycosyl transferase family 4 XCV2493 PF13432 Tetratricopeptide repeat XCV2494 PF06305 XCV2494 XCV2495 PF00216 Bacterial DNA-binding protein XCV2496 PF00575 S1 RNA binding domain XCV2497 PF02224 Cytidylate kinase XCV2498 PF00444 Ribosomal protein L36 XCV2500 PF04371 Porphyromonas-type peptidyl-arginine deiminase XCV2501 PF00795 Carbon-nitrogen hydrolase XCV2502 PF13420 Acetyltransferase (GNAT) domain XCV2503 PF01963 XCV2503 XCV2504 PF03372 Endonuclease/Exonuclease/phosphatase family XCV2505 PF00754 F5/8 type C domain XCV2505 PF06202 Amylo-alpha-1,6-glucosidase XCV2506 PF00528 Binding-protein-dependent transport system inner membrane component XCV2507 PF00528 Binding-protein-dependent transport system inner membrane component XCV2508 PF13416 Bacterial extracellular solute-binding protein XCV2509 PF10091 Putative glucoamylase XCV2510 PF00593 TonB dependent receptor XCV2510 PF13620 Carboxypeptidase regulatory-like domain XCV2511 PF00356 Bacterial regulatory proteins, lacI family XCV2511 PF13377 Periplasmic binding protein-like domain XCV2513 PF01722 BolA-like protein XCV2514 PF03795 YCII-related domain XCV2515 PF02616 ScpA/B protein XCV2516 PF04079 Putative transcriptional regulators (Ypuh-like) XCV2517 PF00849 RNA pseudouridylate synthase XCV2517 PF01479 S4 domain XCV2519 PF05096 Glutamine cyclotransferase XCV2520 PF00795 Carbon-nitrogen hydrolase XCV2521 PF00155 Aminotransferase class I and II XCV2522 PF00005 ABC transporter XCV2523 PF03379 XCV2523 XCV2524 PF01578 XCV2524 XCV2525 PF04995 XCV2525 XCV2526 PF03100 CcmE XCV2527 PF01578 XCV2527 XCV2527 PF16327 XCV2527 XCV2528 PF08534 Redoxin XCV2529 PF03918 Cytochrome C biogenesis protein XCV2530 PF13432 Tetratricopeptide repeat XCV2531 PF00561 alpha/beta hydrolase fold XCV2532 PF00313 'Cold-shock' DNA-binding domain XCV2532 PF06961 XCV2532 XCV2533 PF00005 ABC transporter XCV2533 PF00664 ABC transporter transmembrane region XCV2534 PF00005 ABC transporter XCV2534 PF00664 ABC transporter transmembrane region XCV2535 PF01654 XCV2535 XCV2536 PF02322 XCV2536 XCV2537 PF08173 XCV2537 XCV2538 PF07690 Major Facilitator Superfamily XCV2539 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XCV2539 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCV2540 PF14498 Glycosyl hydrolase family 65, N-terminal domain XCV2541 PF00171 Aldehyde dehydrogenase family XCV2542 PF00696 Amino acid kinase family XCV2542 PF01472 PUA domain XCV2543 PF03795 YCII-related domain XCV2544 PF00206 Lyase XCV2545 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCV2546 PF13302 Acetyltransferase (GNAT) domain XCV2547 PF00696 Amino acid kinase family XCV2547 PF04768 Protein of unknown function (DUF619) XCV2548 PF01546 Peptidase family M20/M25/M40 XCV2548 PF07687 Peptidase dimerisation domain XCV2549 PF13508 Acetyltransferase (GNAT) domain XCV2550 PF00764 Arginosuccinate synthase XCV2551 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCV2551 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCV2553 PF01406 tRNA synthetases class I (C) catalytic domain XCV2553 PF09190 DALR domain XCV2554 PF02657 Fe-S metabolism associated domain XCV2555 PF05977 Transmembrane secretion effector XCV2556 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCV2558 PF01809 XCV2558 XCV2559 PF01979 Amidohydrolase family XCV2560 PF01551 Peptidase family M23 XCV2561 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV2562 PF13520 Amino acid permease XCV2563 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XCV2564 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XCV2566 PF00753 Metallo-beta-lactamase superfamily XCV2567 PF16242 XCV2567 XCV2569 PF00544 Pectate lyase XCV2571 PF00295 Glycosyl hydrolases family 28 XCV2573 PF13419 Haloacid dehalogenase-like hydrolase XCV2574 PF13489 Methyltransferase domain XCV2575 PF01979 Amidohydrolase family XCV2577 PF01132 Elongation factor P (EF-P) OB domain XCV2577 PF08207 Elongation factor P (EF-P) KOW-like domain XCV2577 PF09285 Elongation factor P, C-terminal XCV2578 PF13394 4Fe-4S single cluster domain XCV2579 PF00563 EAL domain XCV2579 PF00672 HAMP domain XCV2579 PF00990 GGDEF domain XCV2579 PF17203 XCV2579 XCV2580 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein XCV2581 PF00588 SpoU rRNA Methylase family XCV2582 PF00459 Inositol monophosphatase family XCV2583 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCV2583 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCV2584 PF00545 ribonuclease XCV2585 PF01337 Barstar (barnase inhibitor) XCV2586 PF00005 ABC transporter XCV2586 PF12848 ABC transporter XCV2586 PF16326 XCV2586 XCV2587 PF00270 DEAD/DEAH box helicase XCV2587 PF00271 Helicase conserved C-terminal domain XCV2587 PF03880 DbpA RNA binding domain XCV2588 PF00156 Phosphoribosyl transferase domain XCV2589 PF02696 XCV2589 XCV2590 PF00135 Carboxylesterase family XCV2591 PF00043 Glutathione S-transferase, C-terminal domain XCV2591 PF02798 Glutathione S-transferase, N-terminal domain XCV2592 PF00313 'Cold-shock' DNA-binding domain XCV2593 PF07152 YaeQ protein XCV2594 PF03486 HI0933-like protein XCV2595 PF00563 EAL domain XCV2595 PF00990 GGDEF domain XCV2595 PF13188 PAS domain XCV2596 PF01435 Peptidase family M48 XCV2597 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCV2598 PF00106 short chain dehydrogenase XCV2599 PF05233 XCV2599 XCV2599 PF07879 XCV2599 XCV2600 PF01963 XCV2600 XCV2601 PF07920 Protein of unknown function (DUF1684) XCV2602 PF01119 DNA mismatch repair protein, C-terminal domain XCV2602 PF08676 MutL C terminal dimerisation domain XCV2602 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2603 PF01520 N-acetylmuramoyl-L-alanine amidase XCV2603 PF11741 AMIN domain XCV2604 PF02367 Uncharacterised P-loop hydrolase UPF0079 XCV2605 PF01256 Carbohydrate kinase XCV2605 PF03853 YjeF-related protein N-terminus XCV2606 PF08331 XCV2606 XCV2606 PF13484 XCV2606 XCV2607 PF02601 XCV2607 XCV2607 PF13742 XCV2607 XCV2608 PF06057 Bacterial virulence protein (VirJ) XCV2610 PF03781 Sulfatase-modifying factor enzyme 1 XCV2611 PF00570 HRDC domain XCV2611 PF01612 3'-5' exonuclease XCV2612 PF01068 ATP dependent DNA ligase domain XCV2612 PF04679 ATP dependent DNA ligase C terminal region XCV2612 PF13298 DNA polymerase Ligase (LigD) XCV2613 PF12244 XCV2613 XCV2614 PF00816 H-NS histone family XCV2615 PF00589 Phage integrase family XCV2615 PF13356 Domain of unknown function (DUF4102) XCV2617 PF01527 Transposase XCV2618 PF13276 XCV2618 XCV2618 PF13683 XCV2618 XCV2619 PF01381 Helix-turn-helix XCV2620 PF02195 ParB-like nuclease domain XCV2621 PF05930 Prophage CP4-57 regulatory protein (AlpA) XCV2623 PF00990 GGDEF domain XCV2623 PF01590 GAF domain XCV2624 PF01584 CheW-like domain XCV2625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV2625 PF00672 HAMP domain XCV2625 PF12729 XCV2625 XCV2626 PF02245 Methylpurine-DNA glycosylase (MPG) XCV2627 PF00270 DEAD/DEAH box helicase XCV2627 PF00271 Helicase conserved C-terminal domain XCV2627 PF08494 XCV2627 XCV2628 PF11743 XCV2628 XCV2630 PF04386 Stringent starvation protein B XCV2631 PF00043 Glutathione S-transferase, C-terminal domain XCV2631 PF13417 Glutathione S-transferase, N-terminal domain XCV2632 PF02167 Cytochrome C1 family XCV2633 PF00032 Cytochrome b(C-terminal)/b6/petD XCV2633 PF00033 Cytochrome b(N-terminal)/b6/petB XCV2634 PF00355 Rieske [2Fe-2S] domain XCV2634 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XCV2635 PF01464 Transglycosylase SLT domain XCV2636 PF08279 HTH domain XCV2636 PF13280 XCV2636 XCV2637 PF02798 Glutathione S-transferase, N-terminal domain XCV2638 PF00919 Uncharacterized protein family UPF0004 XCV2638 PF01938 TRAM domain XCV2638 PF04055 Radical SAM superfamily XCV2640 PF02562 PhoH-like protein XCV2642 PF02130 Uncharacterized protein family UPF0054 XCV2644 PF00571 CBS domain XCV2644 PF03471 Transporter associated domain XCV2645 PF13387 XCV2645 XCV2646 PF01544 CorA-like Mg2+ transporter protein XCV2647 PF00171 Aldehyde dehydrogenase family XCV2648 PF00528 Binding-protein-dependent transport system inner membrane component XCV2649 PF00528 Binding-protein-dependent transport system inner membrane component XCV2650 PF00005 ABC transporter XCV2650 PF08402 TOBE domain XCV2651 PF02321 Outer membrane efflux protein XCV2652 PF07690 Major Facilitator Superfamily XCV2653 PF13533 Biotin-lipoyl like XCV2653 PF16576 XCV2653 XCV2654 PF13416 Bacterial extracellular solute-binding protein XCV2655 PF00202 Aminotransferase class-III XCV2656 PF00120 Glutamine synthetase, catalytic domain XCV2657 PF07722 Peptidase C26 XCV2658 PF00120 Glutamine synthetase, catalytic domain XCV2659 PF01266 FAD dependent oxidoreductase XCV2660 PF00072 Response regulator receiver domain XCV2660 PF00990 GGDEF domain XCV2661 PF01814 Hemerythrin HHE cation binding domain XCV2662 PF00083 Sugar (and other) transporter XCV2662 PF07690 Major Facilitator Superfamily XCV2664 PF00384 Molybdopterin oxidoreductase XCV2664 PF01568 Molydopterin dinucleotide binding domain XCV2665 PF02634 FdhD/NarQ family XCV2666 PF07690 Major Facilitator Superfamily XCV2668 PF00202 Aminotransferase class-III XCV2670 PF04286 XCV2670 XCV2671 PF00072 Response regulator receiver domain XCV2671 PF00512 His Kinase A (phospho-acceptor) domain XCV2671 PF01627 Hpt domain XCV2671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2671 PF03924 CHASE domain XCV2671 PF13426 PAS domain XCV2672 PF00072 Response regulator receiver domain XCV2672 PF13487 HD domain XCV2673 PF07690 Major Facilitator Superfamily XCV2674 PF05088 XCV2674 XCV2674 PF12466 XCV2674 XCV2675 PF00440 Bacterial regulatory proteins, tetR family XCV2675 PF16859 XCV2675 XCV2676 PF16576 XCV2676 XCV2677 PF00873 AcrB/AcrD/AcrF family XCV2678 PF00356 Bacterial regulatory proteins, lacI family XCV2678 PF13377 Periplasmic binding protein-like domain XCV2679 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCV2679 PF00381 PTS HPr component phosphorylation site XCV2679 PF00391 PEP-utilising enzyme, mobile domain XCV2679 PF02896 PEP-utilising enzyme, TIM barrel domain XCV2679 PF05524 PEP-utilising enzyme, N-terminal XCV2680 PF00294 pfkB family carbohydrate kinase XCV2681 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XCV2682 PF04966 Carbohydrate-selective porin, OprB family XCV2685 PF07791 XCV2685 XCV2688 PF07791 XCV2688 XCV2689 PF00665 Integrase core domain XCV2689 PF13276 XCV2689 XCV2690 PF01527 Transposase XCV2692 PF02355 Protein export membrane protein XCV2692 PF07549 SecD/SecF GG Motif XCV2693 PF02355 Protein export membrane protein XCV2693 PF07549 SecD/SecF GG Motif XCV2693 PF13721 SecD export protein N-terminal TM region XCV2694 PF02699 Preprotein translocase subunit XCV2695 PF01702 Queuine tRNA-ribosyltransferase XCV2696 PF02547 Queuosine biosynthesis protein XCV2697 PF01037 AsnC family XCV2697 PF13412 Winged helix-turn-helix DNA-binding XCV2698 PF00202 Aminotransferase class-III XCV2699 PF04488 Glycosyltransferase sugar-binding region containing DXD motif XCV2700 PF00149 Calcineurin-like phosphoesterase XCV2700 PF16656 XCV2700 XCV2701 PF02333 Phytase XCV2702 PF00593 TonB dependent receptor XCV2702 PF07715 TonB-dependent Receptor Plug Domain XCV2703 PF14681 Uracil phosphoribosyltransferase XCV2704 PF00759 Glycosyl hydrolase family 9 XCV2704 PF02927 N-terminal ig-like domain of cellulase XCV2706 PF01019 Gamma-glutamyltranspeptidase XCV2707 PF00037 4Fe-4S binding domain XCV2709 PF01467 Cytidylyltransferase XCV2710 PF03602 Conserved hypothetical protein 95 XCV2711 PF00183 Hsp90 protein XCV2711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2714 PF01609 Transposase DDE domain XCV2715 PF05593 XCV2715 XCV2716 PF01609 Transposase DDE domain XCV2716 PF05598 XCV2716 XCV2717 PF05593 XCV2717 XCV2719 PF05593 XCV2719 XCV2719 PF14220 XCV2719 XCV2721 PF05593 XCV2721 XCV2722 PF01527 Transposase XCV2723 PF13276 XCV2723 XCV2723 PF13683 XCV2723 XCV2724 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) XCV2725 PF00593 TonB dependent receptor XCV2725 PF07715 TonB-dependent Receptor Plug Domain XCV2726 PF00326 Prolyl oligopeptidase family XCV2726 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV2728 PF04616 Glycosyl hydrolases family 43 XCV2729 PF00754 F5/8 type C domain XCV2729 PF07532 XCV2729 XCV2730 PF00593 TonB dependent receptor XCV2730 PF07715 TonB-dependent Receptor Plug Domain XCV2734 PF00082 Subtilase family XCV2734 PF09286 Pro-kumamolisin, activation domain XCV2736 PF01301 Glycosyl hydrolases family 35 XCV2737 PF00326 Prolyl oligopeptidase family XCV2737 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV2738 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV2739 PF13520 Amino acid permease XCV2740 PF05960 Bacterial protein of unknown function (DUF885) XCV2741 PF05960 Bacterial protein of unknown function (DUF885) XCV2742 PF00557 Metallopeptidase family M24 XCV2742 PF01321 Creatinase/Prolidase N-terminal domain XCV2743 PF00171 Aldehyde dehydrogenase family XCV2744 PF00701 Dihydrodipicolinate synthetase family XCV2745 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2746 PF13510 2Fe-2S iron-sulfur cluster binding domain XCV2747 PF01266 FAD dependent oxidoreductase XCV2748 PF05544 Proline racemase XCV2749 PF08448 PAS fold XCV2749 PF12833 Helix-turn-helix domain XCV2750 PF00448 SRP54-type protein, GTPase domain XCV2750 PF02881 SRP54-type protein, helical bundle domain XCV2752 PF00633 Helix-hairpin-helix motif XCV2752 PF00730 HhH-GPD superfamily base excision DNA repair protein XCV2752 PF14815 NUDIX domain XCV2753 PF04362 Bacterial Fe(2+) trafficking XCV2754 PF00072 Response regulator receiver domain XCV2754 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2754 PF13426 PAS domain XCV2756 PF10685 XCV2756 XCV2760 PF08212 Lipocalin-like domain XCV2761 PF03168 Late embryogenesis abundant protein XCV2762 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV2762 PF02770 Acyl-CoA dehydrogenase, middle domain XCV2762 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV2762 PF12418 XCV2762 XCV2762 PF12806 XCV2762 XCV2763 PF14279 XCV2763 XCV2764 PF02779 Transketolase, pyrimidine binding domain XCV2764 PF02780 Transketolase, C-terminal domain XCV2764 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XCV2765 PF04101 Glycosyltransferase family 28 C-terminal domain XCV2767 PF13506 Glycosyl transferase family 21 XCV2768 PF01370 NAD dependent epimerase/dehydratase family XCV2769 PF00753 Metallo-beta-lactamase superfamily XCV2770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCV2770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCV2771 PF01963 XCV2771 XCV2772 PF13276 XCV2772 XCV2772 PF13683 XCV2772 XCV2773 PF01527 Transposase XCV2774 PF01963 XCV2774 XCV2775 PF06172 Cupin superfamily (DUF985) XCV2776 PF03808 XCV2776 XCV2777 PF04230 XCV2777 XCV2779 PF13440 XCV2779 XCV2780 PF13692 Glycosyl transferases group 1 XCV2781 PF00534 Glycosyl transferases group 1 XCV2781 PF13439 Glycosyltransferase Family 4 XCV2782 PF01757 XCV2782 XCV2783 PF01757 XCV2783 XCV2785 PF02397 XCV2785 XCV2785 PF13727 CoA-binding domain XCV2786 PF02706 Chain length determinant protein XCV2786 PF13807 XCV2786 XCV2787 PF02563 Polysaccharide biosynthesis/export protein XCV2787 PF10531 SLBB domain XCV2788 PF13411 MerR HTH family regulatory protein XCV2789 PF00216 Bacterial DNA-binding protein XCV2790 PF01588 Putative tRNA binding domain XCV2790 PF03147 Ferredoxin-fold anticodon binding domain XCV2790 PF03483 B3/4 domain XCV2790 PF03484 tRNA synthetase B5 domain XCV2791 PF01409 tRNA synthetases class II core domain (F) XCV2791 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XCV2792 PF00453 Ribosomal protein L20 XCV2793 PF01632 Ribosomal protein L35 XCV2794 PF00707 Translation initiation factor IF-3, C-terminal domain XCV2794 PF05198 Translation initiation factor IF-3, N-terminal domain XCV2795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCV2795 PF02824 TGS domain XCV2795 PF03129 Anticodon binding domain XCV2795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCV2796 PF00356 Bacterial regulatory proteins, lacI family XCV2796 PF13377 Periplasmic binding protein-like domain XCV2797 PF00128 Alpha amylase, catalytic domain XCV2798 PF07690 Major Facilitator Superfamily XCV2799 PF06202 Amylo-alpha-1,6-glucosidase XCV2800 PF10566 Glycoside hydrolase 97 XCV2800 PF14508 Glycosyl-hydrolase 97 N-terminal XCV2800 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCV2801 PF07715 TonB-dependent Receptor Plug Domain XCV2803 PF00128 Alpha amylase, catalytic domain XCV2804 PF13586 XCV2804 XCV2805 PF01527 Transposase XCV2806 PF13276 XCV2806 XCV2806 PF13683 XCV2806 XCV2807 PF03524 Conjugal transfer protein XCV2808 PF04335 VirB8 protein XCV2809 PF10671 Toxin co-regulated pilus biosynthesis protein Q XCV2810 PF02534 Type IV secretory system Conjugative DNA transfer XCV2812 PF00271 Helicase conserved C-terminal domain XCV2812 PF02151 UvrB/uvrC motif XCV2812 PF04851 Type III restriction enzyme, res subunit XCV2812 PF12344 Ultra-violet resistance protein B XCV2813 PF12019 Type II transport protein GspH XCV2814 PF07963 Prokaryotic N-terminal methylation motif XCV2814 PF16732 XCV2814 XCV2815 PF05567 Neisseria PilC beta-propeller domain XCV2816 PF13276 XCV2816 XCV2816 PF13683 XCV2816 XCV2817 PF01527 Transposase XCV2818 PF14341 XCV2818 XCV2819 PF07963 Prokaryotic N-terminal methylation motif XCV2819 PF16074 XCV2819 XCV2820 PF07963 Prokaryotic N-terminal methylation motif XCV2821 PF07963 Prokaryotic N-terminal methylation motif XCV2821 PF12019 Type II transport protein GspH XCV2822 PF03641 Possible lysine decarboxylase XCV2822 PF11892 Domain of unknown function (DUF3412) XCV2822 PF14793 Domain of unknown function (DUF4478) XCV2823 PF07715 TonB-dependent Receptor Plug Domain XCV2823 PF13620 Carboxypeptidase regulatory-like domain XCV2824 PF01914 XCV2824 XCV2825 PF00106 short chain dehydrogenase XCV2826 PF00462 Glutaredoxin XCV2827 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCV2827 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCV2828 PF02222 ATP-grasp domain XCV2829 PF00731 AIR carboxylase XCV2830 PF03966 Trm112p-like protein XCV2831 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XCV2831 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XCV2832 PF10030 XCV2832 XCV2833 PF00013 KH domain XCV2833 PF00575 S1 RNA binding domain XCV2833 PF01138 3' exoribonuclease family, domain 1 XCV2833 PF03725 3' exoribonuclease family, domain 2 XCV2833 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XCV2834 PF00312 Ribosomal protein S15 XCV2835 PF01509 TruB family pseudouridylate synthase (N terminal domain) XCV2835 PF09157 Pseudouridine synthase II TruB, C-terminal XCV2835 PF16198 XCV2835 XCV2836 PF02033 Ribosome-binding factor A XCV2837 PF00009 Elongation factor Tu GTP binding domain XCV2837 PF04760 Translation initiation factor IF-2, N-terminal region XCV2837 PF08364 XCV2837 XCV2837 PF11987 Translation-initiation factor 2 XCV2838 PF00575 S1 RNA binding domain XCV2838 PF08529 NusA N-terminal domain XCV2838 PF13184 NusA-like KH domain XCV2838 PF14520 Helix-hairpin-helix domain XCV2839 PF02576 Uncharacterised BCR, YhbC family COG0779 XCV2839 PF17384 XCV2839 XCV2840 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV2841 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV2842 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XCV2842 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCV2843 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCV2844 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XCV2845 PF12838 4Fe-4S dicluster domain XCV2846 PF00146 NADH dehydrogenase XCV2847 PF00384 Molybdopterin oxidoreductase XCV2847 PF01568 Molydopterin dinucleotide binding domain XCV2847 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCV2847 PF13510 2Fe-2S iron-sulfur cluster binding domain XCV2848 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XCV2848 PF10531 SLBB domain XCV2848 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCV2849 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin XCV2850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XCV2851 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XCV2852 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XCV2853 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XCV2854 PF03840 Preprotein translocase SecG subunit XCV2855 PF00121 Triosephosphate isomerase XCV2856 PF00106 short chain dehydrogenase XCV2858 PF01152 Bacterial-like globin XCV2859 PF11231 XCV2859 XCV2860 PF00563 EAL domain XCV2860 PF00672 HAMP domain XCV2860 PF00990 GGDEF domain XCV2860 PF14827 Sensory domain of two-component sensor kinase XCV2862 PF03171 2OG-Fe(II) oxygenase superfamily XCV2862 PF14226 non-haem dioxygenase in morphine synthesis N-terminal XCV2863 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCV2863 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCV2863 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCV2863 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCV2864 PF01039 Carboxyl transferase domain XCV2865 PF00290 Tryptophan synthase alpha chain XCV2866 PF00665 Integrase core domain XCV2866 PF13276 XCV2866 XCV2867 PF01527 Transposase XCV2869 PF00291 Pyridoxal-phosphate dependent enzyme XCV2870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2870 PF03466 LysR substrate binding domain XCV2871 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XCV2872 PF01416 tRNA pseudouridine synthase XCV2875 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCV2875 PF02774 Semialdehyde dehydrogenase, dimerisation domain XCV2876 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCV2876 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCV2877 PF01264 Chorismate synthase XCV2878 PF05175 Methyltransferase small domain XCV2879 PF02630 SCO1/SenC XCV2880 PF02666 XCV2880 XCV2881 PF01464 Transglycosylase SLT domain XCV2881 PF01476 LysM domain XCV2882 PF05872 XCV2882 XCV2883 PF00293 NUDIX domain XCV2885 PF01694 Rhomboid family XCV2886 PF01272 Transcription elongation factor, GreA/GreB, C-term XCV2886 PF03449 Transcription elongation factor, N-terminal XCV2887 PF00919 Uncharacterized protein family UPF0004 XCV2887 PF04055 Radical SAM superfamily XCV2888 PF01738 Dienelactone hydrolase family XCV2889 PF01230 HIT domain XCV2892 PF00692 dUTPase XCV2893 PF10609 ParA/MinD ATPase like XCV2894 PF00593 TonB dependent receptor XCV2894 PF07715 TonB-dependent Receptor Plug Domain XCV2895 PF13620 Carboxypeptidase regulatory-like domain XCV2896 PF00593 TonB dependent receptor XCV2897 PF01593 Flavin containing amine oxidoreductase XCV2898 PF01431 Peptidase family M13 XCV2898 PF05649 Peptidase family M13 XCV2899 PF01431 Peptidase family M13 XCV2899 PF05649 Peptidase family M13 XCV2900 PF01431 Peptidase family M13 XCV2900 PF05649 Peptidase family M13 XCV2901 PF01694 Rhomboid family XCV2902 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XCV2903 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCV2903 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV2904 PF01266 FAD dependent oxidoreductase XCV2905 PF04235 XCV2905 XCV2906 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCV2907 PF00877 NlpC/P60 family XCV2908 PF00877 NlpC/P60 family XCV2909 PF03061 Thioesterase superfamily XCV2911 PF13649 Methyltransferase domain XCV2912 PF00375 Sodium:dicarboxylate symporter family XCV2913 PF00245 Alkaline phosphatase XCV2914 PF01171 PP-loop family XCV2914 PF09179 TilS substrate binding domain XCV2914 PF11734 TilS substrate C-terminal domain XCV2915 PF02609 Exonuclease VII small subunit XCV2916 PF00348 Polyprenyl synthetase XCV2918 PF14521 Lysine-specific metallo-endopeptidase XCV2919 PF09685 XCV2919 XCV2920 PF01523 Putative modulator of DNA gyrase XCV2921 PF04751 Protein of unknown function (DUF615) XCV2923 PF01523 Putative modulator of DNA gyrase XCV2925 PF13116 XCV2925 XCV2925 PF13502 XCV2925 XCV2926 PF13116 XCV2926 XCV2927 PF10150 Ribonuclease E/G family XCV2928 PF02545 Maf-like protein XCV2929 PF04402 Protein of unknown function (DUF541) XCV2930 PF03544 Gram-negative bacterial TonB protein C-terminal XCV2931 PF02590 Predicted SPOUT methyltransferase XCV2932 PF05787 Bacterial protein of unknown function (DUF839) XCV2932 PF10518 TAT (twin-arginine translocation) pathway signal sequence XCV2933 PF02410 Oligomerisation domain XCV2934 PF01467 Cytidylyltransferase XCV2935 PF06144 DNA polymerase III, delta subunit XCV2936 PF04390 Lipopolysaccharide-assembly XCV2938 PF00133 tRNA synthetases class I (I, L, M and V) XCV2938 PF08264 Anticodon-binding domain of tRNA XCV2938 PF13603 Leucyl-tRNA synthetase, Domain 2 XCV2939 PF06197 XCV2939 XCV2940 PF00085 Thioredoxin XCV2940 PF14559 Tetratricopeptide repeat XCV2940 PF14561 Tetratricopeptide repeat XCV2941 PF14539 Domain of unknown function (DUF4442) XCV2945 PF04070 XCV2945 XCV2946 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XCV2947 PF00892 EamA-like transporter family XCV2948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2948 PF03466 LysR substrate binding domain XCV2949 PF12840 Helix-turn-helix domain XCV2950 PF11066 XCV2950 XCV2952 PF14257 XCV2952 XCV2953 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCV2955 PF05960 Bacterial protein of unknown function (DUF885) XCV2956 PF00005 ABC transporter XCV2956 PF00664 ABC transporter transmembrane region XCV2958 PF07929 Plasmid pRiA4b ORF-3-like protein XCV2960 PF00873 AcrB/AcrD/AcrF family XCV2961 PF13437 HlyD family secretion protein XCV2961 PF13533 Biotin-lipoyl like XCV2962 PF06629 XCV2962 XCV2963 PF02321 Outer membrane efflux protein XCV2964 PF00072 Response regulator receiver domain XCV2964 PF00486 Transcriptional regulatory protein, C terminal XCV2965 PF00512 His Kinase A (phospho-acceptor) domain XCV2965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV2966 PF00999 Sodium/hydrogen exchanger family XCV2967 PF00144 Beta-lactamase XCV2967 PF11954 XCV2967 XCV2968 PF03737 Demethylmenaquinone methyltransferase XCV2969 PF01904 Protein of unknown function DUF72 XCV2970 PF00892 EamA-like transporter family XCV2971 PF00990 GGDEF domain XCV2971 PF01590 GAF domain XCV2972 PF00849 RNA pseudouridylate synthase XCV2972 PF01479 S4 domain XCV2973 PF00563 EAL domain XCV2973 PF00990 GGDEF domain XCV2973 PF08447 PAS fold XCV2974 PF00270 DEAD/DEAH box helicase XCV2974 PF00271 Helicase conserved C-terminal domain XCV2974 PF03880 DbpA RNA binding domain XCV2975 PF04542 Sigma-70 region 2 XCV2975 PF08281 Sigma-70, region 4 XCV2977 PF13275 S4 domain XCV2979 PF01124 MAPEG family XCV2980 PF13211 XCV2980 XCV2983 PF00730 HhH-GPD superfamily base excision DNA repair protein XCV2983 PF02805 Metal binding domain of Ada XCV2983 PF06029 AlkA N-terminal domain XCV2983 PF12833 Helix-turn-helix domain XCV2984 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XCV2984 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XCV2985 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase XCV2986 PF00654 Voltage gated chloride channel XCV2987 PF17067 XCV2987 XCV2988 PF03203 XCV2988 XCV2989 PF00593 TonB dependent receptor XCV2989 PF07715 TonB-dependent Receptor Plug Domain XCV2991 PF00593 TonB dependent receptor XCV2991 PF07715 TonB-dependent Receptor Plug Domain XCV2993 PF00082 Subtilase family XCV2993 PF01483 Proprotein convertase P-domain XCV2995 PF00248 Aldo/keto reductase family XCV2996 PF07690 Major Facilitator Superfamily XCV2997 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV2997 PF03466 LysR substrate binding domain XCV2998 PF06719 XCV2998 XCV2998 PF12833 Helix-turn-helix domain XCV2999 PF07883 Cupin domain XCV3000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3000 PF03466 LysR substrate binding domain XCV3001 PF00440 Bacterial regulatory proteins, tetR family XCV3001 PF14246 AefR-like transcriptional repressor, C-terminal region XCV3002 PF02321 Outer membrane efflux protein XCV3003 PF00873 AcrB/AcrD/AcrF family XCV3004 PF16576 XCV3004 XCV3005 PF00440 Bacterial regulatory proteins, tetR family XCV3005 PF14246 AefR-like transcriptional repressor, C-terminal region XCV3006 PF01475 Ferric uptake regulator family XCV3007 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCV3008 PF12275 XCV3008 XCV3009 PF00795 Carbon-nitrogen hydrolase XCV3012 PF06123 XCV3012 XCV3013 PF00112 Papain family cysteine protease XCV3014 PF00512 His Kinase A (phospho-acceptor) domain XCV3014 PF00672 HAMP domain XCV3014 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3015 PF00072 Response regulator receiver domain XCV3015 PF00486 Transcriptional regulatory protein, C terminal XCV3016 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ XCV3017 PF13302 Acetyltransferase (GNAT) domain XCV3018 PF00270 DEAD/DEAH box helicase XCV3018 PF00271 Helicase conserved C-terminal domain XCV3018 PF02559 CarD-like/TRCF domain XCV3018 PF03461 TRCF domain XCV3019 PF13466 STAS domain XCV3020 PF01584 CheW-like domain XCV3020 PF01627 Hpt domain XCV3020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3020 PF02895 Signal transducing histidine kinase, homodimeric domain XCV3021 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV3022 PF01584 CheW-like domain XCV3023 PF00072 Response regulator receiver domain XCV3023 PF00563 EAL domain XCV3024 PF01739 CheR methyltransferase, SAM binding domain XCV3024 PF03705 CheR methyltransferase, all-alpha domain XCV3025 PF00072 Response regulator receiver domain XCV3025 PF01339 CheB methylesterase XCV3026 PF13091 PLD-like domain XCV3027 PF01431 Peptidase family M13 XCV3027 PF05649 Peptidase family M13 XCV3029 PF00300 Histidine phosphatase superfamily (branch 1) XCV3030 PF04493 Endonuclease V XCV3032 PF02678 Pirin XCV3032 PF05726 Pirin C-terminal cupin domain XCV3034 PF02566 OsmC-like protein XCV3035 PF02678 Pirin XCV3035 PF05726 Pirin C-terminal cupin domain XCV3036 PF02554 XCV3036 XCV3036 PF13722 XCV3036 XCV3037 PF13419 Haloacid dehalogenase-like hydrolase XCV3038 PF12796 Ankyrin repeats (3 copies) XCV3039 PF11187 Protein of unknown function (DUF2974) XCV3040 PF05684 XCV3040 XCV3042 PF12804 MobA-like NTP transferase domain XCV3043 PF02625 XdhC and CoxI family XCV3043 PF13478 XdhC Rossmann domain XCV3044 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCV3044 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCV3045 PF00941 FAD binding domain in molybdopterin dehydrogenase XCV3045 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCV3046 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV3046 PF01799 [2Fe-2S] binding domain XCV3047 PF00107 Zinc-binding dehydrogenase XCV3047 PF08240 Alcohol dehydrogenase GroES-like domain XCV3048 PF00990 GGDEF domain XCV3048 PF02743 Cache domain XCV3049 PF00436 Single-strand binding protein family XCV3050 PF00348 Polyprenyl synthetase XCV3051 PF01738 Dienelactone hydrolase family XCV3053 PF02875 Mur ligase family, glutamate ligase domain XCV3053 PF08245 Mur ligase middle domain XCV3056 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XCV3056 PF00696 Amino acid kinase family XCV3056 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCV3057 PF02567 Phenazine biosynthesis-like protein XCV3058 PF02567 Phenazine biosynthesis-like protein XCV3059 PF05433 XCV3059 XCV3060 PF02566 OsmC-like protein XCV3061 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCV3061 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCV3062 PF03652 Uncharacterised protein family (UPF0081) XCV3063 PF02622 Uncharacterized ACR, COG1678 XCV3064 PF03352 Methyladenine glycosylase XCV3065 PF01904 Protein of unknown function DUF72 XCV3066 PF02588 XCV3066 XCV3067 PF00437 Type II/IV secretion system protein XCV3068 PF00437 Type II/IV secretion system protein XCV3069 PF01168 Alanine racemase, N-terminal domain XCV3070 PF03807 NADP oxidoreductase coenzyme F420-dependent XCV3070 PF14748 Pyrroline-5-carboxylate reductase dimerisation XCV3071 PF00216 Bacterial DNA-binding protein XCV3072 PF01551 Peptidase family M23 XCV3073 PF12977 Domain of Unknown Function with PDB structure (DUF3861) XCV3075 PF07273 Protein of unknown function (DUF1439) XCV3076 PF01965 DJ-1/PfpI family XCV3077 PF00856 SET domain XCV3078 PF02082 Transcriptional regulator XCV3079 PF01458 Uncharacterized protein family (UPF0051) XCV3080 PF00005 ABC transporter XCV3081 PF01458 Uncharacterized protein family (UPF0051) XCV3082 PF00266 Aminotransferase class-V XCV3083 PF13673 Acetyltransferase (GNAT) domain XCV3084 PF00355 Rieske [2Fe-2S] domain XCV3085 PF00593 TonB dependent receptor XCV3085 PF07715 TonB-dependent Receptor Plug Domain XCV3086 PF13640 2OG-Fe(II) oxygenase superfamily XCV3087 PF08238 Sel1 repeat XCV3088 PF16357 XCV3088 XCV3089 PF10029 XCV3089 XCV3090 PF10670 XCV3090 XCV3091 PF02424 ApbE family XCV3092 PF00175 Oxidoreductase NAD-binding domain XCV3092 PF00258 Flavodoxin XCV3093 PF13202 EF hand XCV3094 PF05962 HutD XCV3096 PF12836 Helix-hairpin-helix motif XCV3097 PF01546 Peptidase family M20/M25/M40 XCV3097 PF07687 Peptidase dimerisation domain XCV3098 PF04226 XCV3098 XCV3099 PF01636 Phosphotransferase enzyme family XCV3100 PF00483 Nucleotidyl transferase XCV3101 PF00308 Bacterial dnaA protein XCV3102 PF01594 XCV3102 XCV3103 PF09839 XCV3103 XCV3104 PF00586 AIR synthase related protein, N-terminal domain XCV3104 PF02769 AIR synthase related protein, C-terminal domain XCV3106 PF00551 Formyl transferase XCV3107 PF11306 Protein of unknown function (DUF3108) XCV3108 PF11306 Protein of unknown function (DUF3108) XCV3110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCV3112 PF01722 BolA-like protein XCV3113 PF00571 CBS domain XCV3113 PF01380 SIS domain XCV3114 PF08282 haloacid dehalogenase-like hydrolase XCV3115 PF06835 Lipopolysaccharide-assembly, LptC-related XCV3116 PF03968 OstA-like protein XCV3117 PF00005 ABC transporter XCV3117 PF12399 Branched-chain amino acid ATP-binding cassette transporter XCV3118 PF00309 XCV3118 XCV3118 PF04552 Sigma-54, DNA binding domain XCV3118 PF04963 Sigma-54 factor, core binding domain XCV3119 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XCV3120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCV3121 PF02603 HPr Serine kinase N terminus XCV3121 PF07475 HPr Serine kinase C-terminal domain XCV3122 PF03668 XCV3122 XCV3123 PF03610 PTS system fructose IIA component XCV3124 PF00381 PTS HPr component phosphorylation site XCV3125 PF00391 PEP-utilising enzyme, mobile domain XCV3125 PF02896 PEP-utilising enzyme, TIM barrel domain XCV3125 PF05524 PEP-utilising enzyme, N-terminal XCV3126 PF00571 CBS domain XCV3126 PF01769 Divalent cation transporter XCV3126 PF03448 MgtE intracellular N domain XCV3127 PF00326 Prolyl oligopeptidase family XCV3128 PF02322 XCV3128 XCV3129 PF01654 XCV3129 XCV3130 PF01244 Membrane dipeptidase (Peptidase family M19) XCV3131 PF00324 Amino acid permease XCV3132 PF00544 Pectate lyase XCV3134 PF00561 alpha/beta hydrolase fold XCV3135 PF00196 Bacterial regulatory proteins, luxR family XCV3135 PF03472 Autoinducer binding domain XCV3136 PF13520 Amino acid permease XCV3138 PF01764 Lipase (class 3) XCV3140 PF13365 Trypsin-like peptidase domain XCV3143 PF12706 Beta-lactamase superfamily domain XCV3144 PF04820 Tryptophan halogenase XCV3145 PF13621 Cupin-like domain XCV3146 PF07277 XCV3146 XCV3147 PF00593 TonB dependent receptor XCV3147 PF07715 TonB-dependent Receptor Plug Domain XCV3148 PF01433 Peptidase family M1 XCV3149 PF00376 MerR family regulatory protein XCV3149 PF09278 MerR, DNA binding XCV3150 PF07690 Major Facilitator Superfamily XCV3152 PF03738 Glutathionylspermidine synthase preATP-grasp XCV3153 PF06693 XCV3153 XCV3154 PF03994 XCV3154 XCV3155 PF10679 XCV3155 XCV3156 PF07885 Ion channel XCV3157 PF04012 XCV3157 XCV3158 PF09938 XCV3158 XCV3159 PF01243 Pyridoxamine 5'-phosphate oxidase XCV3159 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XCV3160 PF01202 Shikimate kinase XCV3161 PF01761 3-dehydroquinate synthase XCV3163 PF01208 Uroporphyrinogen decarboxylase (URO-D) XCV3164 PF07690 Major Facilitator Superfamily XCV3165 PF00072 Response regulator receiver domain XCV3165 PF00512 His Kinase A (phospho-acceptor) domain XCV3165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3165 PF07494 Two component regulator propeller XCV3165 PF07495 Y_Y_Y domain XCV3166 PF00072 Response regulator receiver domain XCV3166 PF00512 His Kinase A (phospho-acceptor) domain XCV3166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3166 PF07494 Two component regulator propeller XCV3166 PF07495 Y_Y_Y domain XCV3167 PF00072 Response regulator receiver domain XCV3167 PF00512 His Kinase A (phospho-acceptor) domain XCV3167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3167 PF07494 Two component regulator propeller XCV3167 PF07495 Y_Y_Y domain XCV3168 PF00072 Response regulator receiver domain XCV3168 PF00512 His Kinase A (phospho-acceptor) domain XCV3168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3168 PF07494 Two component regulator propeller XCV3168 PF07495 Y_Y_Y domain XCV3169 PF04264 YceI-like domain XCV3170 PF01292 Prokaryotic cytochrome b561 XCV3171 PF04264 YceI-like domain XCV3172 PF05768 Glutaredoxin-like domain (DUF836) XCV3173 PF03313 XCV3173 XCV3173 PF03315 Serine dehydratase beta chain XCV3174 PF00561 alpha/beta hydrolase fold XCV3175 PF00742 Homoserine dehydrogenase XCV3175 PF03447 Homoserine dehydrogenase, NAD binding domain XCV3176 PF01053 Cys/Met metabolism PLP-dependent enzyme XCV3177 PF00561 alpha/beta hydrolase fold XCV3178 PF01551 Peptidase family M23 XCV3179 PF00009 Elongation factor Tu GTP binding domain XCV3179 PF16658 XCV3179 XCV3180 PF03006 XCV3180 XCV3181 PF05170 XCV3181 XCV3182 PF00571 CBS domain XCV3183 PF00535 Glycosyl transferase family 2 XCV3184 PF00912 Transglycosylase XCV3185 PF01430 Hsp33 protein XCV3187 PF00593 TonB dependent receptor XCV3187 PF07715 TonB-dependent Receptor Plug Domain XCV3188 PF00440 Bacterial regulatory proteins, tetR family XCV3189 PF12146 Putative lysophospholipase XCV3190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCV3190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCV3190 PF09317 XCV3190 XCV3191 PF06993 XCV3191 XCV3192 PF07690 Major Facilitator Superfamily XCV3193 PF00144 Beta-lactamase XCV3195 PF01597 Glycine cleavage H-protein XCV3196 PF01571 Aminomethyltransferase folate-binding domain XCV3196 PF08669 Glycine cleavage T-protein C-terminal barrel domain XCV3197 PF01957 NfeD-like C-terminal, partner-binding XCV3198 PF02694 XCV3198 XCV3199 PF03819 MazG nucleotide pyrophosphohydrolase domain XCV3200 PF00459 Inositol monophosphatase family XCV3201 PF00293 NUDIX domain XCV3202 PF00202 Aminotransferase class-III XCV3203 PF04452 RNA methyltransferase XCV3204 PF02685 Glucokinase XCV3206 PF00593 TonB dependent receptor XCV3206 PF07715 TonB-dependent Receptor Plug Domain XCV3207 PF01120 Alpha-L-fucosidase XCV3207 PF16757 XCV3207 XCV3208 PF00704 Glycosyl hydrolases family 18 XCV3209 PF00728 Glycosyl hydrolase family 20, catalytic domain XCV3209 PF02838 Glycosyl hydrolase family 20, domain 2 XCV3209 PF13290 XCV3209 XCV3210 PF00703 Glycosyl hydrolases family 2 XCV3211 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV3211 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCV3211 PF07691 PA14 domain XCV3211 PF14310 Fibronectin type III-like domain XCV3212 PF06824 Protein of unknown function (DUF1237) XCV3213 PF07971 Glycosyl hydrolase family 92 XCV3214 PF01301 Glycosyl hydrolases family 35 XCV3217 PF11747 XCV3217 XCV3219 PF13088 BNR repeat-like domain XCV3221 PF03932 CutC family XCV3222 PF01112 Asparaginase XCV3223 PF00092 von Willebrand factor type A domain XCV3223 PF12034 XCV3223 XCV3223 PF12450 XCV3223 XCV3224 PF04542 Sigma-70 region 2 XCV3224 PF04545 Sigma-70, region 4 XCV3226 PF13302 Acetyltransferase (GNAT) domain XCV3227 PF01584 CheW-like domain XCV3228 PF01339 CheB methylesterase XCV3229 PF00072 Response regulator receiver domain XCV3229 PF01584 CheW-like domain XCV3229 PF01627 Hpt domain XCV3229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3229 PF02895 Signal transducing histidine kinase, homodimeric domain XCV3230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV3231 PF01584 CheW-like domain XCV3232 PF00072 Response regulator receiver domain XCV3233 PF00072 Response regulator receiver domain XCV3234 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XCV3234 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XCV3235 PF03544 Gram-negative bacterial TonB protein C-terminal XCV3236 PF03747 ADP-ribosylglycohydrolase XCV3237 PF03747 ADP-ribosylglycohydrolase XCV3238 PF00814 Glycoprotease family XCV3239 PF13307 Helicase C-terminal domain XCV3241 PF00905 Penicillin binding protein transpeptidase domain XCV3241 PF00912 Transglycosylase XCV3241 PF14814 Bifunctional transglycosylase second domain XCV3242 PF00535 Glycosyl transferase family 2 XCV3242 PF13692 Glycosyl transferases group 1 XCV3244 PF02824 TGS domain XCV3244 PF04607 Region found in RelA / SpoT proteins XCV3244 PF13291 ACT domain XCV3244 PF13328 HD domain XCV3245 PF12706 Beta-lactamase superfamily domain XCV3246 PF03070 TENA/THI-4/PQQC family XCV3247 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XCV3248 PF04055 Radical SAM superfamily XCV3248 PF13186 Iron-sulfur cluster-binding domain XCV3248 PF13353 4Fe-4S single cluster domain XCV3250 PF10142 PhoPQ-activated pathogenicity-related protein XCV3251 PF02685 Glucokinase XCV3252 PF00593 TonB dependent receptor XCV3252 PF07715 TonB-dependent Receptor Plug Domain XCV3253 PF00270 DEAD/DEAH box helicase XCV3253 PF00271 Helicase conserved C-terminal domain XCV3253 PF04408 Helicase associated domain (HA2) XCV3253 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XCV3253 PF11898 XCV3253 XCV3254 PF00210 Ferritin-like domain XCV3255 PF00270 DEAD/DEAH box helicase XCV3255 PF00271 Helicase conserved C-terminal domain XCV3255 PF00570 HRDC domain XCV3255 PF09382 RQC domain XCV3255 PF16124 XCV3255 XCV3257 PF00072 Response regulator receiver domain XCV3259 PF01479 S4 domain XCV3261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV3261 PF00672 HAMP domain XCV3261 PF12729 XCV3261 XCV3263 PF01810 XCV3263 XCV3264 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3264 PF03466 LysR substrate binding domain XCV3266 PF00072 Response regulator receiver domain XCV3267 PF07536 XCV3267 XCV3267 PF08448 PAS fold XCV3268 PF06508 Queuosine biosynthesis protein QueC XCV3269 PF04055 Radical SAM superfamily XCV3269 PF13394 4Fe-4S single cluster domain XCV3270 PF13525 Outer membrane lipoprotein XCV3270 PF16331 XCV3270 XCV3271 PF00691 OmpA family XCV3272 PF04052 TolB amino-terminal domain XCV3272 PF07676 WD40-like Beta Propeller Repeat XCV3273 PF13103 TonB C terminal XCV3274 PF02472 Biopolymer transport protein ExbD/TolR XCV3275 PF01618 XCV3275 XCV3276 PF03061 Thioesterase superfamily XCV3277 PF05491 Holliday junction DNA helicase ruvB C-terminus XCV3277 PF05496 Holliday junction DNA helicase ruvB N-terminus XCV3278 PF09346 SMI1 / KNR4 family (SUKH-1) XCV3278 PF14568 SMI1-KNR4 cell-wall XCV3279 PF02705 XCV3279 XCV3280 PF01330 RuvA N terminal domain XCV3280 PF07499 RuvA, C-terminal domain XCV3280 PF14520 Helix-hairpin-helix domain XCV3281 PF02075 Crossover junction endodeoxyribonuclease RuvC XCV3282 PF01709 Transcriptional regulator XCV3283 PF12697 Alpha/beta hydrolase family XCV3284 PF00583 Acetyltransferase (GNAT) family XCV3286 PF00152 tRNA synthetases class II (D, K and N) XCV3286 PF01336 OB-fold nucleic acid binding domain XCV3286 PF02938 GAD domain XCV3287 PF11218 XCV3287 XCV3288 PF09723 XCV3288 XCV3289 PF07690 Major Facilitator Superfamily XCV3290 PF00593 TonB dependent receptor XCV3290 PF07715 TonB-dependent Receptor Plug Domain XCV3291 PF04185 Phosphoesterase family XCV3291 PF05506 XCV3291 XCV3292 PF00326 Prolyl oligopeptidase family XCV3293 PF13354 Beta-lactamase enzyme family XCV3294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3294 PF03466 LysR substrate binding domain XCV3295 PF14317 XCV3295 XCV3296 PF00005 ABC transporter XCV3296 PF12848 ABC transporter XCV3296 PF16326 XCV3296 XCV3297 PF00593 TonB dependent receptor XCV3297 PF07715 TonB-dependent Receptor Plug Domain XCV3298 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV3299 PF00593 TonB dependent receptor XCV3299 PF07715 TonB-dependent Receptor Plug Domain XCV3301 PF00593 TonB dependent receptor XCV3301 PF07715 TonB-dependent Receptor Plug Domain XCV3302 PF00067 Cytochrome P450 XCV3303 PF00999 Sodium/hydrogen exchanger family XCV3304 PF00999 Sodium/hydrogen exchanger family XCV3304 PF02254 TrkA-N domain XCV3305 PF03328 HpcH/HpaI aldolase/citrate lyase family XCV3306 PF00593 TonB dependent receptor XCV3306 PF07715 TonB-dependent Receptor Plug Domain XCV3307 PF02655 ATP-grasp domain XCV3308 PF04183 IucA / IucC family XCV3308 PF06276 Ferric iron reductase FhuF-like transporter XCV3309 PF07690 Major Facilitator Superfamily XCV3310 PF04183 IucA / IucC family XCV3310 PF06276 Ferric iron reductase FhuF-like transporter XCV3311 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XCV3311 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCV3312 PF06445 GyrI-like small molecule binding domain XCV3312 PF12833 Helix-turn-helix domain XCV3313 PF02654 XCV3313 XCV3314 PF00300 Histidine phosphatase superfamily (branch 1) XCV3315 PF02277 Phosphoribosyltransferase XCV3316 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XCV3317 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCV3317 PF07685 CobB/CobQ-like glutamine amidotransferase domain XCV3318 PF00155 Aminotransferase class I and II XCV3319 PF03186 XCV3319 XCV3320 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XCV3320 PF12557 Cob(I)alamin adenosyltransferase N terminal XCV3323 PF00593 TonB dependent receptor XCV3323 PF07715 TonB-dependent Receptor Plug Domain XCV3324 PF00004 ATPase family associated with various cellular activities (AAA) XCV3324 PF02861 Clp amino terminal domain XCV3324 PF07724 AAA domain (Cdc48 subfamily) XCV3324 PF10431 C-terminal, D2-small domain, of ClpB protein XCV3326 PF01541 GIY-YIG catalytic domain XCV3327 PF14497 Glutathione S-transferase, C-terminal domain XCV3328 PF11219 XCV3328 XCV3329 PF07007 Protein of unknown function (DUF1311) XCV3332 PF12098 XCV3332 XCV3333 PF00593 TonB dependent receptor XCV3333 PF07715 TonB-dependent Receptor Plug Domain XCV3334 PF02358 Trehalose-phosphatase XCV3335 PF00723 Glycosyl hydrolases family 15 XCV3336 PF00982 Glycosyltransferase family 20 XCV3337 PF01011 PQQ enzyme repeat XCV3337 PF13360 PQQ-like domain XCV3338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV3339 PF04134 XCV3339 XCV3340 PF13761 XCV3340 XCV3341 PF02578 Multi-copper polyphenol oxidoreductase laccase XCV3342 PF00849 RNA pseudouridylate synthase XCV3343 PF13525 Outer membrane lipoprotein XCV3345 PF00795 Carbon-nitrogen hydrolase XCV3345 PF02540 NAD synthase XCV3346 PF05016 Plasmid stabilisation system protein XCV3348 PF00549 CoA-ligase XCV3348 PF02629 CoA binding domain XCV3349 PF00549 CoA-ligase XCV3349 PF08442 ATP-grasp domain XCV3350 PF00512 His Kinase A (phospho-acceptor) domain XCV3350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3351 PF00072 Response regulator receiver domain XCV3351 PF00158 Sigma-54 interaction domain XCV3351 PF02954 Bacterial regulatory protein, Fis family XCV3352 PF00437 Type II/IV secretion system protein XCV3352 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCV3353 PF00114 Pilin (bacterial filament) XCV3353 PF07963 Prokaryotic N-terminal methylation motif XCV3354 PF00482 Type II secretion system (T2SS), protein F XCV3355 PF01478 Type IV leader peptidase family XCV3355 PF06750 XCV3355 XCV3356 PF01121 Dephospho-CoA kinase XCV3358 PF05593 XCV3358 XCV3359 PF01527 Transposase XCV3360 PF13276 XCV3360 XCV3360 PF13683 XCV3360 XCV3361 PF08845 XCV3361 XCV3362 PF01527 Transposase XCV3363 PF13683 XCV3363 XCV3364 PF00512 His Kinase A (phospho-acceptor) domain XCV3364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3365 PF00072 Response regulator receiver domain XCV3365 PF00486 Transcriptional regulatory protein, C terminal XCV3367 PF08443 RimK-like ATP-grasp domain XCV3368 PF00128 Alpha amylase, catalytic domain XCV3368 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCV3370 PF00816 H-NS histone family XCV3372 PF00565 Staphylococcal nuclease homologue XCV3378 PF03389 MobA/MobL family XCV3382 PF07791 XCV3382 XCV3383 PF00665 Integrase core domain XCV3383 PF13276 XCV3383 XCV3384 PF01527 Transposase XCV3385 PF07514 Putative helicase XCV3386 PF01527 Transposase XCV3387 PF13276 XCV3387 XCV3387 PF13683 XCV3387 XCV3390 PF04610 XCV3390 XCV3392 PF05231 XCV3392 XCV3395 PF01609 Transposase DDE domain XCV3395 PF05598 XCV3395 XCV3397 PF01527 Transposase XCV3398 PF00665 Integrase core domain XCV3398 PF13276 XCV3398 XCV3399 PF12902 Ferritin-like XCV3400 PF05114 Protein of unknown function (DUF692) XCV3401 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) XCV3402 PF02666 XCV3402 XCV3402 PF12588 XCV3402 XCV3403 PF02666 XCV3403 XCV3404 PF04002 RadC-like JAB domain XCV3406 PF13583 Metallo-peptidase family M12B Reprolysin-like XCV3408 PF00816 H-NS histone family XCV3409 PF00665 Integrase core domain XCV3409 PF13276 XCV3409 XCV3410 PF01527 Transposase XCV3411 PF01527 Transposase XCV3412 PF00665 Integrase core domain XCV3414 PF03797 Autotransporter beta-domain XCV3415 PF00657 GDSL-like Lipase/Acylhydrolase XCV3416 PF02597 ThiS family XCV3417 PF05690 Thiazole biosynthesis protein ThiG XCV3418 PF02390 Putative methyltransferase XCV3419 PF02080 TrkA-C domain XCV3419 PF03600 Citrate transporter XCV3420 PF00355 Rieske [2Fe-2S] domain XCV3423 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCV3424 PF01741 Large-conductance mechanosensitive channel, MscL XCV3425 PF04389 Peptidase family M28 XCV3427 PF00356 Bacterial regulatory proteins, lacI family XCV3427 PF13377 Periplasmic binding protein-like domain XCV3428 PF00593 TonB dependent receptor XCV3429 PF07715 TonB-dependent Receptor Plug Domain XCV3430 PF00703 Glycosyl hydrolases family 2 XCV3430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCV3430 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCV3430 PF13385 Concanavalin A-like lectin/glucanases superfamily XCV3431 PF10566 Glycoside hydrolase 97 XCV3431 PF14508 Glycosyl-hydrolase 97 N-terminal XCV3431 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCV3432 PF03080 XCV3432 XCV3433 PF00135 Carboxylesterase family XCV3434 PF00588 SpoU rRNA Methylase family XCV3434 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCV3435 PF13302 Acetyltransferase (GNAT) domain XCV3437 PF01433 Peptidase family M1 XCV3437 PF11838 ERAP1-like C-terminal domain XCV3438 PF07791 XCV3438 XCV3439 PF07791 XCV3439 XCV3443 PF00873 AcrB/AcrD/AcrF family XCV3444 PF16576 XCV3444 XCV3445 PF00009 Elongation factor Tu GTP binding domain XCV3445 PF01583 Adenylylsulphate kinase XCV3446 PF01507 Phosphoadenosine phosphosulfate reductase family XCV3447 PF00175 Oxidoreductase NAD-binding domain XCV3447 PF00258 Flavodoxin XCV3447 PF00667 FAD binding domain XCV3448 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XCV3448 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XCV3449 PF01507 Phosphoadenosine phosphosulfate reductase family XCV3450 PF03929 XCV3450 XCV3451 PF00593 TonB dependent receptor XCV3451 PF07715 TonB-dependent Receptor Plug Domain XCV3452 PF11162 XCV3452 XCV3453 PF01590 GAF domain XCV3453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3457 PF03466 LysR substrate binding domain XCV3458 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCV3458 PF13241 Putative NAD(P)-binding XCV3459 PF00291 Pyridoxal-phosphate dependent enzyme XCV3460 PF04191 Phospholipid methyltransferase XCV3461 PF01661 Macro domain XCV3462 PF00274 Fructose-bisphosphate aldolase class-I XCV3463 PF00224 Pyruvate kinase, barrel domain XCV3463 PF02887 Pyruvate kinase, alpha/beta domain XCV3464 PF13419 Haloacid dehalogenase-like hydrolase XCV3465 PF00162 Phosphoglycerate kinase XCV3466 PF13163 XCV3466 XCV3467 PF10101 XCV3467 XCV3469 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCV3469 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XCV3470 PF08332 Calcium/calmodulin dependent protein kinase II Association XCV3471 PF03922 OmpW family XCV3472 PF03922 OmpW family XCV3473 PF02265 S1/P1 Nuclease XCV3474 PF00753 Metallo-beta-lactamase superfamily XCV3475 PF13531 Bacterial extracellular solute-binding protein XCV3476 PF00528 Binding-protein-dependent transport system inner membrane component XCV3477 PF00005 ABC transporter XCV3479 PF03544 Gram-negative bacterial TonB protein C-terminal XCV3479 PF05569 BlaR1 peptidase M56 XCV3480 PF05569 BlaR1 peptidase M56 XCV3481 PF03965 Penicillinase repressor XCV3482 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain XCV3483 PF16670 XCV3483 XCV3484 PF07715 TonB-dependent Receptor Plug Domain XCV3485 PF00593 TonB dependent receptor XCV3486 PF01471 Putative peptidoglycan binding domain XCV3486 PF03734 L,D-transpeptidase catalytic domain XCV3487 PF01551 Peptidase family M23 XCV3489 PF00593 TonB dependent receptor XCV3489 PF07715 TonB-dependent Receptor Plug Domain XCV3490 PF00456 Transketolase, thiamine diphosphate binding domain XCV3490 PF02779 Transketolase, pyrimidine binding domain XCV3490 PF02780 Transketolase, C-terminal domain XCV3491 PF00375 Sodium:dicarboxylate symporter family XCV3492 PF13584 XCV3492 XCV3493 PF00515 Tetratricopeptide repeat XCV3493 PF13519 von Willebrand factor type A domain XCV3494 PF00092 von Willebrand factor type A domain XCV3495 PF01882 XCV3495 XCV3496 PF07726 ATPase family associated with various cellular activities (AAA) XCV3497 PF00263 XCV3497 XCV3497 PF03958 Bacterial type II/III secretion system short domain XCV3497 PF07660 Secretin and TonB N terminus short domain XCV3498 PF04351 Pilus assembly protein, PilP XCV3499 PF04350 Pilus assembly protein, PilO XCV3500 PF05137 XCV3500 XCV3501 PF11104 Type IV pilus assembly protein PilM; XCV3502 PF00905 Penicillin binding protein transpeptidase domain XCV3502 PF00912 Transglycosylase XCV3502 PF17092 XCV3502 XCV3504 PF00285 Citrate synthase XCV3506 PF01197 Ribosomal protein L31 XCV3507 PF01156 Inosine-uridine preferring nucleoside hydrolase XCV3508 PF00270 DEAD/DEAH box helicase XCV3508 PF00271 Helicase conserved C-terminal domain XCV3508 PF17191 XCV3508 XCV3509 PF01042 Endoribonuclease L-PSP XCV3510 PF02824 TGS domain XCV3510 PF04607 Region found in RelA / SpoT proteins XCV3510 PF13291 ACT domain XCV3510 PF13328 HD domain XCV3511 PF01192 RNA polymerase Rpb6 XCV3512 PF00625 Guanylate kinase XCV3513 PF03755 XCV3513 XCV3513 PF08340 XCV3513 XCV3514 PF01138 3' exoribonuclease family, domain 1 XCV3514 PF03725 3' exoribonuclease family, domain 2 XCV3516 PF01725 Ham1 family XCV3517 PF04055 Radical SAM superfamily XCV3517 PF06969 HemN C-terminal domain XCV3518 PF07793 XCV3518 XCV3519 PF07238 PilZ domain XCV3520 PF00557 Metallopeptidase family M24 XCV3522 PF00557 Metallopeptidase family M24 XCV3522 PF05195 Aminopeptidase P, N-terminal domain XCV3523 PF03695 Uncharacterised protein family (UPF0149) XCV3525 PF05164 Cell division protein ZapA XCV3526 PF01812 5-formyltetrahydrofolate cyclo-ligase family XCV3527 PF01878 EVE domain XCV3528 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XCV3529 PF02643 Uncharacterized ACR, COG1430 XCV3530 PF13369 XCV3530 XCV3530 PF13371 Tetratricopeptide repeat XCV3531 PF00301 Rubredoxin XCV3532 PF02581 Thiamine monophosphate synthase/TENI XCV3534 PF07715 TonB-dependent Receptor Plug Domain XCV3534 PF13620 Carboxypeptidase regulatory-like domain XCV3535 PF00202 Aminotransferase class-III XCV3536 PF00196 Bacterial regulatory proteins, luxR family XCV3536 PF13424 Tetratricopeptide repeat XCV3537 PF00127 Copper binding proteins, plastocyanin/azurin family XCV3538 PF00155 Aminotransferase class I and II XCV3539 PF01042 Endoribonuclease L-PSP XCV3540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCV3541 PF01593 Flavin containing amine oxidoreductase XCV3542 PF00593 TonB dependent receptor XCV3542 PF07715 TonB-dependent Receptor Plug Domain XCV3544 PF00202 Aminotransferase class-III XCV3545 PF00520 Ion transport protein XCV3546 PF00106 short chain dehydrogenase XCV3548 PF01569 PAP2 superfamily XCV3548 PF09335 XCV3548 XCV3548 PF14067 XCV3548 XCV3549 PF01062 XCV3549 XCV3551 PF02190 ATP-dependent protease La (LON) domain XCV3552 PF01225 Mur ligase family, catalytic domain XCV3552 PF02875 Mur ligase family, glutamate ligase domain XCV3552 PF08245 Mur ligase middle domain XCV3553 PF00406 Adenylate kinase XCV3554 PF00365 Phosphofructokinase XCV3558 PF04610 XCV3558 XCV3560 PF01764 Lipase (class 3) XCV3561 PF04610 XCV3561 XCV3564 PF04610 XCV3564 XCV3568 PF03030 Inorganic H+ pyrophosphatase XCV3570 PF00719 Inorganic pyrophosphatase XCV3571 PF08668 HDOD domain XCV3572 PF00593 TonB dependent receptor XCV3572 PF07715 TonB-dependent Receptor Plug Domain XCV3573 PF12833 Helix-turn-helix domain XCV3574 PF00486 Transcriptional regulatory protein, C terminal XCV3574 PF07676 WD40-like Beta Propeller Repeat XCV3575 PF01964 ThiC family XCV3575 PF13667 ThiC-associated domain XCV3576 PF00593 TonB dependent receptor XCV3576 PF07715 TonB-dependent Receptor Plug Domain XCV3577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCV3578 PF01019 Gamma-glutamyltranspeptidase XCV3579 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XCV3579 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain XCV3580 PF00205 Thiamine pyrophosphate enzyme, central domain XCV3580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCV3580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCV3581 PF13710 ACT domain XCV3582 PF00291 Pyridoxal-phosphate dependent enzyme XCV3583 PF00682 HMGL-like XCV3583 PF08502 LeuA allosteric (dimerisation) domain XCV3584 PF00180 Isocitrate/isopropylmalate dehydrogenase XCV3585 PF00694 Aconitase C-terminal domain XCV3586 PF00330 Aconitase family (aconitate hydratase) XCV3587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3587 PF03466 LysR substrate binding domain XCV3588 PF00990 GGDEF domain XCV3588 PF07494 Two component regulator propeller XCV3588 PF07495 Y_Y_Y domain XCV3589 PF00440 Bacterial regulatory proteins, tetR family XCV3589 PF14246 AefR-like transcriptional repressor, C-terminal region XCV3590 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XCV3591 PF02321 Outer membrane efflux protein XCV3592 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XCV3593 PF03279 XCV3593 XCV3594 PF04932 XCV3594 XCV3595 PF00534 Glycosyl transferases group 1 XCV3595 PF13439 Glycosyltransferase Family 4 XCV3596 PF10276 Zinc-finger domain XCV3597 PF07971 Glycosyl hydrolase family 92 XCV3598 PF00390 Malic enzyme, N-terminal domain XCV3598 PF01515 Phosphate acetyl/butaryl transferase XCV3598 PF03949 Malic enzyme, NAD binding domain XCV3599 PF00375 Sodium:dicarboxylate symporter family XCV3600 PF07396 Phosphate-selective porin O and P XCV3601 PF00072 Response regulator receiver domain XCV3601 PF00512 His Kinase A (phospho-acceptor) domain XCV3601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3601 PF02743 Cache domain XCV3601 PF12860 XCV3601 XCV3602 PF00083 Sugar (and other) transporter XCV3603 PF13531 Bacterial extracellular solute-binding protein XCV3604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3604 PF03466 LysR substrate binding domain XCV3605 PF00248 Aldo/keto reductase family XCV3606 PF12680 SnoaL-like domain XCV3607 PF11512 Agrobacterium tumefaciens protein Atu4866 XCV3608 PF00072 Response regulator receiver domain XCV3608 PF00196 Bacterial regulatory proteins, luxR family XCV3609 PF13531 Bacterial extracellular solute-binding protein XCV3610 PF00512 His Kinase A (phospho-acceptor) domain XCV3610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3610 PF08521 XCV3610 XCV3611 PF00072 Response regulator receiver domain XCV3611 PF00486 Transcriptional regulatory protein, C terminal XCV3612 PF07396 Phosphate-selective porin O and P XCV3613 PF03600 Citrate transporter XCV3614 PF13561 Enoyl-(Acyl carrier protein) reductase XCV3615 PF00356 Bacterial regulatory proteins, lacI family XCV3615 PF13377 Periplasmic binding protein-like domain XCV3616 PF07690 Major Facilitator Superfamily XCV3617 PF00593 TonB dependent receptor XCV3617 PF07715 TonB-dependent Receptor Plug Domain XCV3618 PF00128 Alpha amylase, catalytic domain XCV3619 PF01965 DJ-1/PfpI family XCV3620 PF08014 XCV3620 XCV3621 PF03193 Protein of unknown function, DUF258 XCV3622 PF00155 Aminotransferase class I and II XCV3623 PF13472 GDSL-like Lipase/Acylhydrolase family XCV3624 PF08242 Methyltransferase domain XCV3625 PF01522 Polysaccharide deacetylase XCV3626 PF00462 Glutaredoxin XCV3626 PF00581 Rhodanese-like domain XCV3628 PF06041 Bacterial protein of unknown function (DUF924) XCV3629 PF01979 Amidohydrolase family XCV3630 PF07969 Amidohydrolase family XCV3632 PF09284 Rhamnogalacturonase B, N-terminal XCV3632 PF14683 Polysaccharide lyase family 4, domain III XCV3632 PF14686 Polysaccharide lyase family 4, domain II XCV3634 PF01670 Glycosyl hydrolase family 12 XCV3635 PF02645 Uncharacterised protein, DegV family COG1307 XCV3636 PF01327 Polypeptide deformylase XCV3637 PF03960 ArsC family XCV3639 PF02225 PA domain XCV3640 PF04733 Coatomer epsilon subunit XCV3640 PF05420 XCV3640 XCV3640 PF13432 Tetratricopeptide repeat XCV3640 PF14559 Tetratricopeptide repeat XCV3641 PF01270 Glycosyl hydrolases family 8 XCV3642 PF03170 Bacterial cellulose synthase subunit XCV3643 PF07238 PilZ domain XCV3644 PF00535 Glycosyl transferase family 2 XCV3644 PF03552 Cellulose synthase XCV3647 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XCV3650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCV3650 PF13641 Glycosyltransferase like family 2 XCV3652 PF00535 Glycosyl transferase family 2 XCV3653 PF01636 Phosphotransferase enzyme family XCV3654 PF00593 TonB dependent receptor XCV3654 PF07715 TonB-dependent Receptor Plug Domain XCV3655 PF04973 XCV3655 XCV3656 PF00392 Bacterial regulatory proteins, gntR family XCV3656 PF07702 UTRA domain XCV3657 PF00535 Glycosyl transferase family 2 XCV3658 PF00263 XCV3658 XCV3658 PF03958 Bacterial type II/III secretion system short domain XCV3660 PF10741 XCV3660 XCV3661 PF05137 XCV3661 XCV3662 PF03934 Type II secretion system (T2SS), protein K XCV3664 PF07963 Prokaryotic N-terminal methylation motif XCV3665 PF12019 Type II transport protein GspH XCV3666 PF08334 Type II secretion system (T2SS), protein G XCV3667 PF00482 Type II secretion system (T2SS), protein F XCV3668 PF00437 Type II/IV secretion system protein XCV3668 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCV3669 PF00082 Subtilase family XCV3669 PF04151 Bacterial pre-peptidase C-terminal domain XCV3670 PF05658 Head domain of trimeric autotransporter adhesin XCV3670 PF05662 Coiled stalk of trimeric autotransporter adhesin XCV3670 PF13018 XCV3670 XCV3671 PF00082 Subtilase family XCV3672 PF03895 YadA-like C-terminal region XCV3672 PF05658 Head domain of trimeric autotransporter adhesin XCV3672 PF05662 Coiled stalk of trimeric autotransporter adhesin XCV3674 PF02769 AIR synthase related protein, C-terminal domain XCV3674 PF13507 CobB/CobQ-like glutamine amidotransferase domain XCV3675 PF10411 Disulfide bond isomerase protein N-terminus XCV3675 PF13098 Thioredoxin-like domain XCV3676 PF00589 Phage integrase family XCV3676 PF02899 Phage integrase, N-terminal SAM-like domain XCV3677 PF06271 XCV3677 XCV3679 PF03739 XCV3679 XCV3680 PF03739 XCV3680 XCV3681 PF00883 Cytosol aminopeptidase family, catalytic domain XCV3681 PF02789 Cytosol aminopeptidase family, N-terminal domain XCV3683 PF04364 DNA polymerase III chi subunit, HolC XCV3684 PF00133 tRNA synthetases class I (I, L, M and V) XCV3684 PF08264 Anticodon-binding domain of tRNA XCV3684 PF10458 Valyl tRNA synthetase tRNA binding arm XCV3685 PF00593 TonB dependent receptor XCV3685 PF07715 TonB-dependent Receptor Plug Domain XCV3686 PF01464 Transglycosylase SLT domain XCV3686 PF14718 Soluble lytic murein transglycosylase L domain XCV3687 PF00544 Pectate lyase XCV3688 PF00583 Acetyltransferase (GNAT) family XCV3690 PF01066 CDP-alcohol phosphatidyltransferase XCV3691 PF13511 XCV3691 XCV3692 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCV3692 PF03129 Anticodon binding domain XCV3692 PF04073 Aminoacyl-tRNA editing domain XCV3693 PF00816 H-NS histone family XCV3694 PF06738 XCV3694 XCV3694 PF12821 XCV3694 XCV3695 PF02405 XCV3695 XCV3696 PF00005 ABC transporter XCV3697 PF02470 XCV3697 XCV3698 PF03886 Protein of unknown function (DUF330) XCV3699 PF13532 2OG-Fe(II) oxygenase superfamily XCV3700 PF01946 Thi4 family XCV3700 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase XCV3701 PF01144 Coenzyme A transferase XCV3702 PF01144 Coenzyme A transferase XCV3703 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCV3703 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCV3703 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCV3703 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCV3704 PF00483 Nucleotidyl transferase XCV3704 PF01050 Mannose-6-phosphate isomerase XCV3705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCV3705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCV3705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCV3706 PF04321 RmlD substrate binding domain XCV3707 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XCV3708 PF00483 Nucleotidyl transferase XCV3709 PF16363 XCV3709 XCV3710 PF01012 Electron transfer flavoprotein domain XCV3711 PF00766 Electron transfer flavoprotein FAD-binding domain XCV3711 PF01012 Electron transfer flavoprotein domain XCV3712 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCV3713 PF00535 Glycosyl transferase family 2 XCV3714 PF00132 Bacterial transferase hexapeptide (six repeats) XCV3714 PF05523 WxcM-like, C-terminal XCV3715 PF04138 XCV3715 XCV3717 PF01370 NAD dependent epimerase/dehydratase family XCV3718 PF16363 XCV3718 XCV3719 PF00534 Glycosyl transferases group 1 XCV3719 PF13579 Glycosyl transferase 4-like domain XCV3720 PF01636 Phosphotransferase enzyme family XCV3720 PF13847 Methyltransferase domain XCV3721 PF00005 ABC transporter XCV3721 PF14524 Wzt C-terminal domain XCV3722 PF01061 XCV3722 XCV3723 PF00534 Glycosyl transferases group 1 XCV3723 PF13439 Glycosyltransferase Family 4 XCV3723 PF13692 Glycosyl transferases group 1 XCV3725 PF01053 Cys/Met metabolism PLP-dependent enzyme XCV3726 PF00291 Pyridoxal-phosphate dependent enzyme XCV3726 PF00571 CBS domain XCV3727 PF04325 Protein of unknown function (DUF465) XCV3729 PF14346 Domain of unknown function (DUF4398) XCV3730 PF00437 Type II/IV secretion system protein XCV3731 PF13410 Glutathione S-transferase, C-terminal domain XCV3731 PF13417 Glutathione S-transferase, N-terminal domain XCV3732 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCV3733 PF00270 DEAD/DEAH box helicase XCV3733 PF00271 Helicase conserved C-terminal domain XCV3734 PF01242 6-pyruvoyl tetrahydropterin synthase XCV3735 PF09361 XCV3735 XCV3736 PF13500 AAA domain XCV3737 PF13185 GAF domain XCV3738 PF04994 TfoX C-terminal domain XCV3739 PF13419 Haloacid dehalogenase-like hydrolase XCV3740 PF00817 impB/mucB/samB family XCV3740 PF11799 impB/mucB/samB family C-terminal domain XCV3741 PF07977 FabA-like domain XCV3742 PF00109 Beta-ketoacyl synthase, N-terminal domain XCV3742 PF02801 Beta-ketoacyl synthase, C-terminal domain XCV3743 PF08239 Bacterial SH3 domain XCV3744 PF01432 Peptidase family M3 XCV3745 PF00291 Pyridoxal-phosphate dependent enzyme XCV3747 PF00394 Multicopper oxidase XCV3747 PF07731 Multicopper oxidase XCV3747 PF07732 Multicopper oxidase XCV3748 PF05275 XCV3748 XCV3749 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCV3751 PF01471 Putative peptidoglycan binding domain XCV3754 PF01380 SIS domain XCV3754 PF13522 Glutamine amidotransferase domain XCV3755 PF13437 HlyD family secretion protein XCV3755 PF13533 Biotin-lipoyl like XCV3756 PF00005 ABC transporter XCV3757 PF02687 XCV3757 XCV3757 PF12704 MacB-like periplasmic core domain XCV3758 PF02687 XCV3758 XCV3758 PF12704 MacB-like periplasmic core domain XCV3760 PF00072 Response regulator receiver domain XCV3760 PF00158 Sigma-54 interaction domain XCV3760 PF02954 Bacterial regulatory protein, Fis family XCV3761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3762 PF00132 Bacterial transferase hexapeptide (six repeats) XCV3762 PF12804 MobA-like NTP transferase domain XCV3762 PF14602 Hexapeptide repeat of succinyl-transferase XCV3763 PF04138 XCV3763 XCV3765 PF01817 Chorismate mutase type II XCV3766 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XCV3766 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XCV3767 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCV3767 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCV3768 PF00231 ATP synthase XCV3769 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCV3769 PF00306 ATP synthase alpha/beta chain, C terminal domain XCV3769 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCV3770 PF00213 ATP synthase delta (OSCP) subunit XCV3771 PF00430 ATP synthase B/B' CF(0) XCV3772 PF00137 ATP synthase subunit C XCV3773 PF00119 ATP synthase A chain XCV3777 PF00364 Biotin-requiring enzyme XCV3777 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCV3777 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV3779 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCV3779 PF00364 Biotin-requiring enzyme XCV3779 PF02817 e3 binding domain XCV3780 PF11101 XCV3780 XCV3781 PF03167 Uracil DNA glycosylase superfamily XCV3782 PF03922 OmpW family XCV3787 PF03180 NLPA lipoprotein XCV3788 PF00528 Binding-protein-dependent transport system inner membrane component XCV3789 PF00005 ABC transporter XCV3789 PF09383 NIL domain XCV3790 PF00892 EamA-like transporter family XCV3791 PF04461 Protein of unknown function (DUF520) XCV3793 PF00072 Response regulator receiver domain XCV3793 PF00512 His Kinase A (phospho-acceptor) domain XCV3793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3794 PF12146 Putative lysophospholipase XCV3795 PF07209 XCV3795 XCV3797 PF13561 Enoyl-(Acyl carrier protein) reductase XCV3798 PF13419 Haloacid dehalogenase-like hydrolase XCV3799 PF00849 RNA pseudouridylate synthase XCV3800 PF05175 Methyltransferase small domain XCV3802 PF07995 Glucose / Sorbosone dehydrogenase XCV3803 PF11607 Protein of unknown function (DUF3247) XCV3804 PF00072 Response regulator receiver domain XCV3804 PF00512 His Kinase A (phospho-acceptor) domain XCV3804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV3804 PF08448 PAS fold XCV3804 PF13426 PAS domain XCV3807 PF11454 XCV3807 XCV3808 PF00842 Alanine racemase, C-terminal domain XCV3808 PF01168 Alanine racemase, N-terminal domain XCV3809 PF01266 FAD dependent oxidoreductase XCV3810 PF01037 AsnC family XCV3810 PF13404 AsnC-type helix-turn-helix domain XCV3812 PF01641 SelR domain XCV3813 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme XCV3814 PF01618 XCV3814 XCV3815 PF00691 OmpA family XCV3815 PF13677 XCV3815 XCV3817 PF13223 XCV3817 XCV3820 PF11730 XCV3820 XCV3821 PF01061 XCV3821 XCV3822 PF00005 ABC transporter XCV3823 PF00999 Sodium/hydrogen exchanger family XCV3824 PF02469 Fasciclin domain XCV3825 PF03167 Uracil DNA glycosylase superfamily XCV3825 PF13566 XCV3825 XCV3826 PF04055 Radical SAM superfamily XCV3827 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCV3828 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3828 PF03466 LysR substrate binding domain XCV3829 PF03358 NADPH-dependent FMN reductase XCV3830 PF00248 Aldo/keto reductase family XCV3831 PF00248 Aldo/keto reductase family XCV3833 PF00535 Glycosyl transferase family 2 XCV3834 PF01431 Peptidase family M13 XCV3834 PF05649 Peptidase family M13 XCV3835 PF09995 XCV3835 XCV3837 PF13520 Amino acid permease XCV3839 PF00072 Response regulator receiver domain XCV3839 PF04397 LytTr DNA-binding domain XCV3840 PF06580 XCV3840 XCV3841 PF01266 FAD dependent oxidoreductase XCV3844 PF05974 Domain of unknown function (DUF892) XCV3845 PF05067 Manganese containing catalase XCV3849 PF01339 CheB methylesterase XCV3849 PF01739 CheR methyltransferase, SAM binding domain XCV3849 PF03705 CheR methyltransferase, all-alpha domain XCV3849 PF07536 XCV3849 XCV3849 PF08447 PAS fold XCV3849 PF13596 PAS domain XCV3850 PF00072 Response regulator receiver domain XCV3852 PF00072 Response regulator receiver domain XCV3852 PF00158 Sigma-54 interaction domain XCV3852 PF02954 Bacterial regulatory protein, Fis family XCV3854 PF01654 XCV3854 XCV3855 PF02322 XCV3855 XCV3858 PF13561 Enoyl-(Acyl carrier protein) reductase XCV3859 PF16363 XCV3859 XCV3860 PF13692 Glycosyl transferases group 1 XCV3861 PF03275 UDP-galactopyranose mutase XCV3861 PF13450 NAD(P)-binding Rossmann-like domain XCV3863 PF00005 ABC transporter XCV3863 PF00664 ABC transporter transmembrane region XCV3864 PF12244 XCV3864 XCV3865 PF13628 XCV3865 XCV3866 PF00107 Zinc-binding dehydrogenase XCV3866 PF08240 Alcohol dehydrogenase GroES-like domain XCV3866 PF13823 Alcohol dehydrogenase GroES-associated XCV3868 PF03692 XCV3868 XCV3871 PF11828 XCV3871 XCV3872 PF05650 XCV3872 XCV3873 PF00691 OmpA family XCV3874 PF11445 XCV3874 XCV3875 PF00593 TonB dependent receptor XCV3875 PF07715 TonB-dependent Receptor Plug Domain XCV3876 PF12040 XCV3876 XCV3877 PF12040 XCV3877 XCV3877 PF12679 XCV3877 XCV3878 PF00005 ABC transporter XCV3879 PF00246 Zinc carboxypeptidase XCV3880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3880 PF03466 LysR substrate binding domain XCV3881 PF01042 Endoribonuclease L-PSP XCV3882 PF01223 DNA/RNA non-specific endonuclease XCV3883 PF12697 Alpha/beta hydrolase family XCV3884 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3884 PF03466 LysR substrate binding domain XCV3885 PF02525 Flavodoxin-like fold XCV3886 PF03795 YCII-related domain XCV3888 PF07866 Protein of unknown function (DUF1653) XCV3891 PF00916 XCV3891 XCV3891 PF01740 STAS domain XCV3892 PF00654 Voltage gated chloride channel XCV3894 PF00557 Metallopeptidase family M24 XCV3895 PF11903 XCV3895 XCV3896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3896 PF03466 LysR substrate binding domain XCV3897 PF13561 Enoyl-(Acyl carrier protein) reductase XCV3898 PF12680 SnoaL-like domain XCV3899 PF01494 FAD binding domain XCV3900 PF01494 FAD binding domain XCV3904 PF00717 Peptidase S24-like XCV3905 PF00817 impB/mucB/samB family XCV3906 PF00817 impB/mucB/samB family XCV3907 PF05069 XCV3907 XCV3912 PF00140 Sigma-70 factor, region 1 XCV3912 PF03979 Sigma-70 factor, region 1 XCV3912 PF04539 Sigma-70 region 3 XCV3912 PF04542 Sigma-70 region 2 XCV3912 PF04545 Sigma-70, region 4 XCV3912 PF04546 Sigma-70, non-essential region XCV3913 PF02580 D-Tyr-tRNA(Tyr) deacylase XCV3914 PF03279 XCV3914 XCV3915 PF13420 Acetyltransferase (GNAT) domain XCV3916 PF00925 GTP cyclohydrolase II XCV3917 PF03703 XCV3917 XCV3918 PF03703 XCV3918 XCV3919 PF05598 XCV3919 XCV3920 PF02350 UDP-N-acetylglucosamine 2-epimerase XCV3921 PF00535 Glycosyl transferase family 2 XCV3922 PF04932 XCV3922 XCV3923 PF13231 XCV3923 XCV3924 PF01029 NusB family XCV3924 PF01189 NOL1/NOP2/sun family XCV3925 PF00551 Formyl transferase XCV3925 PF02911 Formyl transferase, C-terminal domain XCV3926 PF01327 Polypeptide deformylase XCV3927 PF01476 LysM domain XCV3928 PF02481 DNA recombination-mediator protein A XCV3929 PF04361 XCV3929 XCV3930 PF00114 Pilin (bacterial filament) XCV3930 PF14237 XCV3930 XCV3931 PF06271 XCV3931 XCV3931 PF14237 XCV3931 XCV3932 PF01131 DNA topoisomerase XCV3932 PF01751 Toprim domain XCV3932 PF13368 XCV3932 XCV3933 PF01300 Telomere recombination XCV3936 PF13561 Enoyl-(Acyl carrier protein) reductase XCV3938 PF01343 Peptidase family S49 XCV3939 PF01554 MatE XCV3940 PF12412 XCV3940 XCV3941 PF11304 XCV3941 XCV3943 PF00270 DEAD/DEAH box helicase XCV3943 PF00271 Helicase conserved C-terminal domain XCV3944 PF00043 Glutathione S-transferase, C-terminal domain XCV3945 PF01936 NYN domain XCV3945 PF12872 OST-HTH/LOTUS domain XCV3947 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCV3948 PF03458 XCV3948 XCV3949 PF00140 Sigma-70 factor, region 1 XCV3949 PF04542 Sigma-70 region 2 XCV3949 PF04545 Sigma-70, region 4 XCV3950 PF03167 Uracil DNA glycosylase superfamily XCV3951 PF00072 Response regulator receiver domain XCV3953 PF00005 ABC transporter XCV3954 PF00270 DEAD/DEAH box helicase XCV3954 PF00271 Helicase conserved C-terminal domain XCV3954 PF12300 XCV3954 XCV3955 PF00085 Thioredoxin XCV3956 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCV3956 PF07497 Rho termination factor, RNA-binding domain XCV3956 PF07498 Rho termination factor, N-terminal domain XCV3958 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XCV3959 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV3959 PF03466 LysR substrate binding domain XCV3960 PF03971 Monomeric isocitrate dehydrogenase XCV3962 PF01476 LysM domain XCV3963 PF14489 QueF-like protein XCV3963 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XCV3964 PF01546 Peptidase family M20/M25/M40 XCV3964 PF07687 Peptidase dimerisation domain XCV3965 PF16576 XCV3965 XCV3966 PF00873 AcrB/AcrD/AcrF family XCV3967 PF00873 AcrB/AcrD/AcrF family XCV3968 PF07063 Domain of unknown function (DUF1338) XCV3971 PF13419 Haloacid dehalogenase-like hydrolase XCV3972 PF13202 EF hand XCV3973 PF13202 EF hand XCV3976 PF14255 XCV3976 XCV3977 PF01427 D-ala-D-ala dipeptidase XCV3978 PF01510 N-acetylmuramoyl-L-alanine amidase XCV3979 PF00877 NlpC/P60 family XCV3979 PF12913 SH3 domain of the SH3b1 type XCV3979 PF12914 SH3 domain of SH3b2 type XCV3980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCV3980 PF13378 Enolase C-terminal domain-like XCV3982 PF13520 Amino acid permease XCV3986 PF05360 XCV3986 XCV3987 PF07995 Glucose / Sorbosone dehydrogenase XCV3988 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV3988 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCV3988 PF14310 Fibronectin type III-like domain XCV3989 PF02152 Dihydroneopterin aldolase XCV3990 PF00814 Glycoprotease family XCV3991 PF01165 Ribosomal protein S21 XCV3992 PF09424 Yqey-like protein XCV3993 PF03631 XCV3993 XCV3994 PF01807 CHC2 zinc finger XCV3994 PF08275 DNA primase catalytic core, N-terminal domain XCV3994 PF08278 DNA primase DnaG DnaB-binding XCV3994 PF10410 DnaB-helicase binding domain of primase XCV3994 PF13155 Toprim-like XCV3995 PF13593 SBF-like CPA transporter family (DUF4137) XCV3996 PF13899 Thioredoxin-like XCV3997 PF01040 UbiA prenyltransferase family XCV3998 PF02628 XCV3998 XCV4000 PF02104 XCV4000 XCV4001 PF11137 XCV4001 XCV4002 PF00510 Cytochrome c oxidase subunit III XCV4003 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XCV4005 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCV4006 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCV4006 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XCV4007 PF10003 XCV4007 XCV4008 PF00171 Aldehyde dehydrogenase family XCV4008 PF01619 Proline dehydrogenase XCV4008 PF14850 DNA-binding domain of Proline dehydrogenase XCV4010 PF00579 tRNA synthetases class I (W and Y) XCV4011 PF01551 Peptidase family M23 XCV4011 PF04225 Opacity-associated protein A LysM-like domain XCV4012 PF03702 Uncharacterised protein family (UPF0075) XCV4014 PF07690 Major Facilitator Superfamily XCV4015 PF03372 Endonuclease/Exonuclease/phosphatase family XCV4016 PF00156 Phosphoribosyl transferase domain XCV4018 PF13614 AAA domain XCV4019 PF02195 ParB-like nuclease domain XCV4020 PF11731 XCV4020 XCV4021 PF01370 NAD dependent epimerase/dehydratase family XCV4022 PF00535 Glycosyl transferase family 2 XCV4023 PF07578 Lipid A Biosynthesis N-terminal domain XCV4025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCV4025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCV4025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCV4025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCV4026 PF00692 dUTPase XCV4027 PF02441 Flavoprotein XCV4027 PF04127 DNA / pantothenate metabolism flavoprotein XCV4028 PF04002 RadC-like JAB domain XCV4029 PF00750 tRNA synthetases class I (R) XCV4029 PF03485 Arginyl tRNA synthetase N terminal domain XCV4029 PF05746 DALR anticodon binding domain XCV4030 PF05036 Sporulation related domain XCV4032 PF00106 short chain dehydrogenase XCV4033 PF01757 XCV4033 XCV4034 PF03033 Glycosyltransferase family 28 N-terminal domain XCV4035 PF00501 AMP-binding enzyme XCV4035 PF00550 Phosphopantetheine attachment site XCV4035 PF00975 Thioesterase domain XCV4035 PF13193 AMP-binding enzyme C-terminal domain XCV4036 PF00501 AMP-binding enzyme XCV4036 PF00668 Condensation domain XCV4038 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCV4039 PF01564 Spermine/spermidine synthase XCV4039 PF17284 XCV4039 XCV4040 PF09851 XCV4040 XCV4040 PF14470 Bacterial PH domain XCV4042 PF01163 RIO1 family XCV4043 PF02838 Glycosyl hydrolase family 20, domain 2 XCV4043 PF07555 beta-N-acetylglucosaminidase XCV4045 PF00543 Nitrogen regulatory protein P-II XCV4046 PF04380 XCV4046 XCV4047 PF01078 Magnesium chelatase, subunit ChlI XCV4047 PF13335 XCV4047 XCV4047 PF13541 Subunit ChlI of Mg-chelatase XCV4048 PF08212 Lipocalin-like domain XCV4051 PF00563 EAL domain XCV4051 PF12792 XCV4051 XCV4052 PF00487 XCV4052 XCV4053 PF00111 2Fe-2S iron-sulfur cluster binding domain XCV4053 PF00175 Oxidoreductase NAD-binding domain XCV4053 PF00970 Oxidoreductase FAD-binding domain XCV4054 PF00440 Bacterial regulatory proteins, tetR family XCV4057 PF01145 SPFH domain / Band 7 family XCV4058 PF01139 tRNA-splicing ligase RtcB XCV4060 PF00326 Prolyl oligopeptidase family XCV4061 PF11379 XCV4061 XCV4066 PF13628 XCV4066 XCV4067 PF01370 NAD dependent epimerase/dehydratase family XCV4067 PF08338 Domain of unknown function (DUF1731) XCV4068 PF00072 Response regulator receiver domain XCV4068 PF00486 Transcriptional regulatory protein, C terminal XCV4069 PF00512 His Kinase A (phospho-acceptor) domain XCV4069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV4071 PF11769 XCV4071 XCV4074 PF13180 PDZ domain XCV4074 PF13365 Trypsin-like peptidase domain XCV4078 PF01594 XCV4078 XCV4079 PF13419 Haloacid dehalogenase-like hydrolase XCV4080 PF00883 Cytosol aminopeptidase family, catalytic domain XCV4082 PF04542 Sigma-70 region 2 XCV4082 PF08281 Sigma-70, region 4 XCV4083 PF00199 Catalase XCV4084 PF01292 Prokaryotic cytochrome b561 XCV4085 PF06283 Trehalose utilisation XCV4086 PF00072 Response regulator receiver domain XCV4086 PF00196 Bacterial regulatory proteins, luxR family XCV4087 PF07730 Histidine kinase XCV4088 PF16576 XCV4088 XCV4089 PF00005 ABC transporter XCV4090 PF02687 XCV4090 XCV4090 PF12704 MacB-like periplasmic core domain XCV4091 PF02687 XCV4091 XCV4091 PF12704 MacB-like periplasmic core domain XCV4092 PF12697 Alpha/beta hydrolase family XCV4093 PF00892 EamA-like transporter family XCV4094 PF00892 EamA-like transporter family XCV4096 PF02225 PA domain XCV4096 PF04389 Peptidase family M28 XCV4097 PF00753 Metallo-beta-lactamase superfamily XCV4098 PF00579 tRNA synthetases class I (W and Y) XCV4099 PF05532 CsbD-like XCV4100 PF08085 XCV4100 XCV4101 PF08085 XCV4101 XCV4102 PF00491 Arginase family XCV4103 PF03259 Roadblock/LC7 domain XCV4107 PF02223 Thymidylate kinase XCV4108 PF05036 Sporulation related domain XCV4109 PF03309 Type III pantothenate kinase XCV4110 PF02237 Biotin protein ligase C terminal domain XCV4110 PF03099 Biotin/lipoate A/B protein ligase family XCV4110 PF08279 HTH domain XCV4112 PF06167 Glucose-regulated metallo-peptidase M90 XCV4113 PF07394 XCV4113 XCV4114 PF08811 XCV4114 XCV4115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV4116 PF00072 Response regulator receiver domain XCV4116 PF00486 Transcriptional regulatory protein, C terminal XCV4118 PF01207 Dihydrouridine synthase (Dus) XCV4121 PF12796 Ankyrin repeats (3 copies) XCV4122 PF00199 Catalase XCV4122 PF06628 Catalase-related immune-responsive XCV4123 PF13307 Helicase C-terminal domain XCV4126 PF01488 Shikimate / quinate 5-dehydrogenase XCV4126 PF08501 Shikimate dehydrogenase substrate binding domain XCV4127 PF07676 WD40-like Beta Propeller Repeat XCV4128 PF00175 Oxidoreductase NAD-binding domain XCV4128 PF00258 Flavodoxin XCV4128 PF03929 XCV4128 XCV4129 PF03929 XCV4129 XCV4130 PF01223 DNA/RNA non-specific endonuclease XCV4131 PF00490 Delta-aminolevulinic acid dehydratase XCV4134 PF05960 Bacterial protein of unknown function (DUF885) XCV4136 PF00326 Prolyl oligopeptidase family XCV4136 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV4137 PF00043 Glutathione S-transferase, C-terminal domain XCV4137 PF02798 Glutathione S-transferase, N-terminal domain XCV4138 PF00593 TonB dependent receptor XCV4138 PF07715 TonB-dependent Receptor Plug Domain XCV4139 PF07277 XCV4139 XCV4140 PF13621 Cupin-like domain XCV4141 PF04820 Tryptophan halogenase XCV4142 PF03544 Gram-negative bacterial TonB protein C-terminal XCV4143 PF12679 XCV4143 XCV4144 PF00005 ABC transporter XCV4145 PF00561 alpha/beta hydrolase fold XCV4145 PF08386 TAP-like protein XCV4146 PF01381 Helix-turn-helix XCV4148 PF01229 Glycosyl hydrolases family 39 XCV4149 PF02583 Metal-sensitive transcriptional repressor XCV4150 PF01545 Cation efflux family XCV4151 PF00175 Oxidoreductase NAD-binding domain XCV4151 PF00970 Oxidoreductase FAD-binding domain XCV4152 PF00005 ABC transporter XCV4153 PF01061 XCV4153 XCV4154 PF02558 Ketopantoate reductase PanE/ApbA XCV4154 PF08546 Ketopantoate reductase PanE/ApbA C terminal XCV4156 PF03061 Thioesterase superfamily XCV4157 PF12158 XCV4157 XCV4158 PF00085 Thioredoxin XCV4159 PF00258 Flavodoxin XCV4160 PF00268 Ribonucleotide reductase, small chain XCV4161 PF00317 Ribonucleotide reductase, all-alpha domain XCV4161 PF02867 Ribonucleotide reductase, barrel domain XCV4162 PF04332 XCV4162 XCV4163 PF13302 Acetyltransferase (GNAT) domain XCV4163 PF13380 CoA binding domain XCV4163 PF13549 ATP-grasp domain XCV4163 PF13607 Succinyl-CoA ligase like flavodoxin domain XCV4164 PF00571 CBS domain XCV4164 PF01769 Divalent cation transporter XCV4164 PF03448 MgtE intracellular N domain XCV4165 PF00194 Eukaryotic-type carbonic anhydrase XCV4166 PF00999 Sodium/hydrogen exchanger family XCV4166 PF02254 TrkA-N domain XCV4167 PF05593 XCV4167 XCV4168 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCV4168 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCV4169 PF00723 Glycosyl hydrolases family 15 XCV4170 PF00023 Ankyrin repeat XCV4170 PF12796 Ankyrin repeats (3 copies) XCV4171 PF05166 YcgL domain XCV4172 PF00109 Beta-ketoacyl synthase, N-terminal domain XCV4172 PF02801 Beta-ketoacyl synthase, C-terminal domain XCV4173 PF13723 XCV4173 XCV4174 PF00535 Glycosyl transferase family 2 XCV4175 PF04820 Tryptophan halogenase XCV4175 PF13450 NAD(P)-binding Rossmann-like domain XCV4176 PF01609 Transposase DDE domain XCV4176 PF05598 XCV4176 XCV4178 PF13561 Enoyl-(Acyl carrier protein) reductase XCV4181 PF03176 MMPL family XCV4185 PF03279 XCV4185 XCV4186 PF07977 FabA-like domain XCV4187 PF01553 Acyltransferase XCV4189 PF00550 Phosphopantetheine attachment site XCV4190 PF04820 Tryptophan halogenase XCV4192 PF00501 AMP-binding enzyme XCV4194 PF00326 Prolyl oligopeptidase family XCV4194 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCV4198 PF01218 Coproporphyrinogen III oxidase XCV4200 PF00476 DNA polymerase family A XCV4200 PF01367 5'-3' exonuclease, C-terminal SAM fold XCV4200 PF01612 3'-5' exonuclease XCV4200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCV4201 PF11191 Protein of unknown function (DUF2782) XCV4202 PF06812 XCV4202 XCV4203 PF05860 haemagglutination activity domain XCV4204 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XCV4204 PF08479 POTRA domain, ShlB-type XCV4206 PF00069 Protein kinase domain XCV4206 PF03781 Sulfatase-modifying factor enzyme 1 XCV4207 PF13672 Protein phosphatase 2C XCV4208 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) XCV4209 PF06744 XCV4209 XCV4209 PF06761 XCV4209 XCV4209 PF14331 XCV4209 XCV4210 PF00691 OmpA family XCV4210 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) XCV4211 PF05936 XCV4211 XCV4212 PF00248 Aldo/keto reductase family XCV4213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV4213 PF03466 LysR substrate binding domain XCV4214 PF00498 FHA domain XCV4217 PF05954 Phage late control gene D protein (GPD) XCV4218 PF00515 Tetratricopeptide repeat XCV4218 PF13489 Methyltransferase domain XCV4219 PF05488 PAAR motif XCV4220 PF00069 Protein kinase domain XCV4220 PF13424 Tetratricopeptide repeat XCV4221 PF07638 ECF sigma factor XCV4222 PF04542 Sigma-70 region 2 XCV4222 PF08281 Sigma-70, region 4 XCV4223 PF04773 FecR protein XCV4223 PF16220 XCV4223 XCV4223 PF16344 XCV4223 XCV4224 PF00593 TonB dependent receptor XCV4224 PF07715 TonB-dependent Receptor Plug Domain XCV4225 PF00328 Histidine phosphatase superfamily (branch 2) XCV4226 PF01419 Jacalin-like lectin domain XCV4228 PF02517 CAAX protease self-immunity XCV4229 PF13511 XCV4229 XCV4233 PF14441 XCV4233 XCV4234 PF01527 Transposase XCV4235 PF13276 XCV4235 XCV4235 PF13683 XCV4235 XCV4236 PF00004 ATPase family associated with various cellular activities (AAA) XCV4236 PF07724 AAA domain (Cdc48 subfamily) XCV4236 PF10431 C-terminal, D2-small domain, of ClpB protein XCV4237 PF06996 XCV4237 XCV4238 PF05947 XCV4238 XCV4239 PF04965 Gene 25-like lysozyme XCV4240 PF07024 ImpE protein XCV4241 PF05638 Protein of unknown function (DUF796) XCV4242 PF05943 XCV4242 XCV4243 PF05591 XCV4243 XCV4244 PF12833 Helix-turn-helix domain XCV4245 PF00582 Universal stress protein family XCV4246 PF00132 Bacterial transferase hexapeptide (six repeats) XCV4246 PF12464 Maltose acetyltransferase XCV4248 PF00580 UvrD/REP helicase N-terminal domain XCV4248 PF13361 UvrD-like helicase C-terminal domain XCV4249 PF13454 FAD-NAD(P)-binding XCV4251 PF13091 PLD-like domain XCV4252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV4252 PF03466 LysR substrate binding domain XCV4253 PF03737 Demethylmenaquinone methyltransferase XCV4254 PF04303 PrpF protein XCV4255 PF04909 Amidohydrolase XCV4256 PF00471 Ribosomal protein L33 XCV4257 PF00830 Ribosomal L28 family XCV4259 PF00873 AcrB/AcrD/AcrF family XCV4260 PF16576 XCV4260 XCV4261 PF02321 Outer membrane efflux protein XCV4263 PF05960 Bacterial protein of unknown function (DUF885) XCV4264 PF02527 rRNA small subunit methyltransferase G XCV4265 PF09423 PhoD-like phosphatase XCV4265 PF16655 XCV4265 XCV4266 PF09423 PhoD-like phosphatase XCV4266 PF16655 XCV4266 XCV4267 PF01648 4'-phosphopantetheinyl transferase superfamily XCV4268 PF04226 XCV4268 XCV4269 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCV4270 PF03372 Endonuclease/Exonuclease/phosphatase family XCV4272 PF00474 Sodium:solute symporter family XCV4273 PF04341 XCV4273 XCV4275 PF00501 AMP-binding enzyme XCV4275 PF13193 AMP-binding enzyme C-terminal domain XCV4275 PF16177 XCV4275 XCV4276 PF00072 Response regulator receiver domain XCV4276 PF00196 Bacterial regulatory proteins, luxR family XCV4277 PF14415 Domain of unknown function (DUF4424) XCV4279 PF00578 AhpC/TSA family XCV4281 PF04616 Glycosyl hydrolases family 43 XCV4282 PF00248 Aldo/keto reductase family XCV4283 PF04909 Amidohydrolase XCV4284 PF13561 Enoyl-(Acyl carrier protein) reductase XCV4285 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCV4287 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCV4287 PF13378 Enolase C-terminal domain-like XCV4288 PF05336 Domain of unknown function (DUF718) XCV4289 PF07690 Major Facilitator Superfamily XCV4290 PF01614 Bacterial transcriptional regulator XCV4290 PF09339 IclR helix-turn-helix domain XCV4291 PF02659 XCV4291 XCV4292 PF00072 Response regulator receiver domain XCV4292 PF00512 His Kinase A (phospho-acceptor) domain XCV4292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCV4292 PF12860 XCV4292 XCV4294 PF15979 XCV4294 XCV4295 PF06165 Glycosyltransferase family 36 XCV4295 PF17167 XCV4295 XCV4296 PF13347 MFS/sugar transport protein XCV4297 PF01202 Shikimate kinase XCV4300 PF13360 PQQ-like domain XCV4300 PF13570 PQQ-like domain XCV4305 PF04357 XCV4305 XCV4306 PF01103 Surface antigen XCV4306 PF07244 Surface antigen variable number repeat XCV4306 PF17243 XCV4306 XCV4307 PF07715 TonB-dependent Receptor Plug Domain XCV4308 PF00593 TonB dependent receptor XCV4309 PF13469 Sulfotransferase family XCV4310 PF02092 XCV4310 XCV4310 PF05746 DALR anticodon binding domain XCV4311 PF02091 Glycyl-tRNA synthetase alpha subunit XCV4312 PF00437 Type II/IV secretion system protein XCV4312 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCV4317 PF00117 Glutamine amidotransferase class-I XCV4319 PF00902 Sec-independent protein translocase protein (TatC) XCV4320 PF02416 mttA/Hcf106 family XCV4321 PF02416 mttA/Hcf106 family XCV4322 PF04366 XCV4322 XCV4323 PF00762 Ferrochelatase XCV4324 PF00561 alpha/beta hydrolase fold XCV4326 PF01863 Protein of unknown function DUF45 XCV4327 PF04381 Putative exonuclease, RdgC XCV4328 PF01171 PP-loop family XCV4332 PF00356 Bacterial regulatory proteins, lacI family XCV4332 PF13377 Periplasmic binding protein-like domain XCV4333 PF03648 Glycosyl hydrolase family 67 N-terminus XCV4333 PF07477 Glycosyl hydrolase family 67 C-terminus XCV4333 PF07488 Glycosyl hydrolase family 67 middle domain XCV4334 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCV4334 PF03629 Domain of unknown function (DUF303) XCV4335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCV4335 PF13378 Enolase C-terminal domain-like XCV4336 PF04616 Glycosyl hydrolases family 43 XCV4337 PF00933 Glycosyl hydrolase family 3 N terminal domain XCV4337 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCV4337 PF07691 PA14 domain XCV4337 PF14310 Fibronectin type III-like domain XCV4338 PF01232 Mannitol dehydrogenase Rossmann domain XCV4338 PF08125 Mannitol dehydrogenase C-terminal domain XCV4341 PF10013 XCV4341 XCV4343 PF01344 Kelch motif XCV4343 PF13964 Kelch motif XCV4344 PF00440 Bacterial regulatory proteins, tetR family XCV4345 PF00171 Aldehyde dehydrogenase family XCV4348 PF00202 Aminotransferase class-III XCV4349 PF00596 Class II Aldolase and Adducin N-terminal domain XCV4350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCV4350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCV4351 PF09694 XCV4351 XCV4352 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) XCV4353 PF08450 SMP-30/Gluconolaconase/LRE-like region XCV4355 PF00331 Glycosyl hydrolase family 10 XCV4356 PF00703 Glycosyl hydrolases family 2 XCV4356 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCV4356 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCV4356 PF16355 XCV4356 XCV4357 PF02614 Glucuronate isomerase XCV4358 PF00331 Glycosyl hydrolase family 10 XCV4360 PF00331 Glycosyl hydrolase family 10 XCV4361 PF07690 Major Facilitator Superfamily XCV4362 PF00593 TonB dependent receptor XCV4362 PF07715 TonB-dependent Receptor Plug Domain XCV4363 PF13347 MFS/sugar transport protein XCV4364 PF04616 Glycosyl hydrolases family 43 XCV4365 PF08212 Lipocalin-like domain XCV4366 PF06877 Regulator of ribonuclease activity B XCV4367 PF16826 XCV4367 XCV4369 PF04325 Protein of unknown function (DUF465) XCV4370 PF00107 Zinc-binding dehydrogenase XCV4370 PF08240 Alcohol dehydrogenase GroES-like domain XCV4371 PF01553 Acyltransferase XCV4373 PF00356 Bacterial regulatory proteins, lacI family XCV4373 PF13377 Periplasmic binding protein-like domain XCV4374 PF00593 TonB dependent receptor XCV4374 PF13620 Carboxypeptidase regulatory-like domain XCV4376 PF00593 TonB dependent receptor XCV4377 PF04820 Tryptophan halogenase XCV4378 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XCV4379 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XCV4380 PF04337 Protein of unknown function, DUF480 XCV4381 PF14094 XCV4381 XCV4382 PF13302 Acetyltransferase (GNAT) domain XCV4383 PF00580 UvrD/REP helicase N-terminal domain XCV4383 PF13361 UvrD-like helicase C-terminal domain XCV4384 PF00265 Thymidine kinase XCV4386 PF00512 His Kinase A (phospho-acceptor) domain XCV4386 PF01590 GAF domain XCV4387 PF04349 Periplasmic glucan biosynthesis protein, MdoG XCV4388 PF14315 XCV4388 XCV4389 PF14315 XCV4389 XCV4390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCV4390 PF06827 Zinc finger found in FPG and IleRS XCV4390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCV4391 PF03594 XCV4391 XCV4392 PF00360 Phytochrome region XCV4392 PF01590 GAF domain XCV4392 PF08446 PAS fold XCV4392 PF08448 PAS fold XCV4393 PF01126 Heme oxygenase XCV4394 PF07690 Major Facilitator Superfamily XCV4395 PF01263 Aldose 1-epimerase XCV4395 PF01471 Putative peptidoglycan binding domain XCV4395 PF13406 Transglycosylase SLT domain XCV4397 PF02810 SEC-C motif XCV4398 PF01925 XCV4398 XCV4399 PF13555 P-loop containing region of AAA domain XCV4399 PF13558 Putative exonuclease SbcCD, C subunit XCV4400 PF13835 XCV4400 XCV4401 PF11855 XCV4401 XCV4402 PF01227 GTP cyclohydrolase I XCV4403 PF12802 MarR family XCV4404 PF07869 XCV4404 XCV4405 PF13437 HlyD family secretion protein XCV4405 PF13533 Biotin-lipoyl like XCV4406 PF02321 Outer membrane efflux protein XCV4407 PF04632 XCV4407 XCV4408 PF00083 Sugar (and other) transporter XCV4409 PF08922 Domain of unknown function (DUF1905) XCV4409 PF13376 XCV4409 XCV4410 PF07007 Protein of unknown function (DUF1311) XCV4411 PF01471 Putative peptidoglycan binding domain XCV4412 PF13091 PLD-like domain XCV4415 PF05016 Plasmid stabilisation system protein XCV4418 PF00756 Putative esterase XCV4419 PF09722 XCV4419 XCV4422 PF00849 RNA pseudouridylate synthase XCV4427 PF01396 XCV4427 XCV4427 PF04471 Restriction endonuclease XCV4428 PF06414 Zeta toxin XCV4431 PF07080 Protein of unknown function (DUF1348) XCV4432 PF00440 Bacterial regulatory proteins, tetR family XCV4433 PF00440 Bacterial regulatory proteins, tetR family XCV4434 PF13561 Enoyl-(Acyl carrier protein) reductase XCV4437 PF05299 M61 glycyl aminopeptidase XCV4438 PF01156 Inosine-uridine preferring nucleoside hydrolase XCV4439 PF01381 Helix-turn-helix XCV4440 PF05015 Plasmid maintenance system killer protein XCV4441 PF13245 Part of AAA domain XCV4441 PF13538 UvrD-like helicase C-terminal domain XCV4442 PF00580 UvrD/REP helicase N-terminal domain XCV4442 PF12705 PD-(D/E)XK nuclease superfamily XCV4442 PF13361 UvrD-like helicase C-terminal domain XCV4443 PF04257 Exodeoxyribonuclease V, gamma subunit XCV4444 PF03160 Calx-beta domain XCV4444 PF03797 Autotransporter beta-domain XCV4444 PF05345 Putative Ig domain XCV4445 PF07484 Phage Tail Collar Domain XCV4446 PF07484 Phage Tail Collar Domain XCV4447 PF07484 Phage Tail Collar Domain XCV4448 PF13673 Acetyltransferase (GNAT) domain XCV4450 PF00005 ABC transporter XCV4451 PF02405 XCV4451 XCV4452 PF02470 XCV4452 XCV4453 PF05494 Toluene tolerance, Ttg2 XCV4454 PF13466 STAS domain XCV4455 PF04333 XCV4455 XCV4456 PF14534 Domain of unknown function (DUF4440) XCV4457 PF00255 Glutathione peroxidase XCV4459 PF02646 XCV4459 XCV4460 PF08240 Alcohol dehydrogenase GroES-like domain XCV4460 PF13602 Zinc-binding dehydrogenase XCV4461 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCV4461 PF03466 LysR substrate binding domain XCV4464 PF13410 Glutathione S-transferase, C-terminal domain XCV4464 PF13417 Glutathione S-transferase, N-terminal domain XCV4466 PF13520 Amino acid permease XCV4467 PF07971 Glycosyl hydrolase family 92 XCV4468 PF00593 TonB dependent receptor XCV4468 PF07715 TonB-dependent Receptor Plug Domain XCV4469 PF10947 XCV4469 XCV4470 PF00990 GGDEF domain XCV4470 PF01590 GAF domain XCV4470 PF08448 PAS fold XCV4471 PF05651 XCV4471 XCV4471 PF13556 PucR C-terminal helix-turn-helix domain XCV4472 PF02595 Glycerate kinase family XCV4473 PF07690 Major Facilitator Superfamily XCV4474 PF01244 Membrane dipeptidase (Peptidase family M19) XCV4476 PF10672 S-adenosylmethionine-dependent methyltransferase XCV4477 PF03741 XCV4477 XCV4478 PF01694 Rhomboid family XCV4479 PF03009 Glycerophosphoryl diester phosphodiesterase family XCV4480 PF00593 TonB dependent receptor XCV4481 PF07715 TonB-dependent Receptor Plug Domain XCV4482 PF01569 PAP2 superfamily XCV4483 PF01926 50S ribosome-binding GTPase XCV4483 PF10396 GTP-binding protein TrmE N-terminus XCV4483 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE XCV4484 PF00656 Caspase domain XCV4484 PF01522 Polysaccharide deacetylase XCV4484 PF13424 Tetratricopeptide repeat XCV4485 PF02096 60Kd inner membrane protein XCV4485 PF14849 YidC periplasmic domain XCV4486 PF00825 Ribonuclease P XCV4487 PF00468 Ribosomal protein L34 XCVa0001 PF05144 XCVa0001 XCVa0001 PF05155 XCVa0001 XCVb0004 PF16473 XCVb0004 XCVb0008 PF03389 MobA/MobL family XCVb0011 PF00665 Integrase core domain XCVb0011 PF13276 XCVb0011 XCVb0012 PF01527 Transposase XCVb0013 PF02810 SEC-C motif XCVb0013 PF03695 Uncharacterised protein family (UPF0149) XCVb0014 PF13276 XCVb0014 XCVb0014 PF13683 XCVb0014 XCVb0015 PF01526 XCVb0015 XCVb0015 PF13700 XCVb0015 XCVb0016 PF13470 XCVb0016 XCVb0017 PF16762 XCVb0017 XCVb0018 PF00239 Resolvase, N terminal domain XCVb0019 PF13730 XCVb0019 XCVb0021 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCVc0002 PF02452 PemK-like protein XCVc0003 PF11455 XCVc0003 XCVc0005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCVc0007 PF11740 XCVc0007 XCVc0008 PF00239 Resolvase, N terminal domain XCVc0009 PF00872 XCVc0009 XCVc0011 PF01527 Transposase XCVc0012 PF00665 Integrase core domain XCVc0017 PF05016 Plasmid stabilisation system protein XCVc0021 PF10412 Type IV secretion-system coupling protein DNA-binding domain XCVc0022 PF08751 TrwC relaxase XCVc0022 PF13538 UvrD-like helicase C-terminal domain XCVc0022 PF13604 AAA domain XCVc0023 PF02452 PemK-like protein XCVc0024 PF11455 XCVc0024 XCVc0026 PF13091 PLD-like domain XCVc0028 PF01464 Transglycosylase SLT domain XCVc0029 PF00437 Type II/IV secretion system protein XCVc0030 PF03743 Bacterial conjugation TrbI-like protein XCVc0031 PF03524 Conjugal transfer protein XCVc0032 PF04335 VirB8 protein XCVc0033 PF04610 XCVc0033 XCVc0035 PF07996 Type IV secretion system proteins XCVc0036 PF02810 SEC-C motif XCVc0036 PF03695 Uncharacterised protein family (UPF0149) XCVc0037 PF01526 XCVc0037 XCVc0037 PF13700 XCVc0037 XCVc0038 PF13470 XCVc0038 XCVc0039 PF16762 XCVc0039 XCVc0040 PF00239 Resolvase, N terminal domain XCVc0041 PF03135 XCVc0041 XCVc0042 PF04956 XCVc0042 XCVd0001 PF13614 AAA domain XCVd0002 PF02195 ParB-like nuclease domain XCVd0005 PF16816 XCVd0005 XCVd0006 PF16932 XCVd0006 XCVd0007 PF00437 Type II/IV secretion system protein XCVd0010 PF06406 StbA protein XCVd0011 PF10671 Toxin co-regulated pilus biosynthesis protein Q XCVd0012 PF00263 XCVd0012 XCVd0012 PF07655 XCVd0012 XCVd0013 PF06864 XCVd0013 XCVd0014 PF00437 Type II/IV secretion system protein XCVd0015 PF00482 Type II secretion system (T2SS), protein F XCVd0016 PF00437 Type II/IV secretion system protein XCVd0017 PF04917 XCVd0017 XCVd0021 PF01609 Transposase DDE domain XCVd0021 PF05598 XCVd0021 XCVd0022 PF13276 XCVd0022 XCVd0022 PF13683 XCVd0022 XCVd0024 PF00665 Integrase core domain XCVd0024 PF13276 XCVd0024 XCVd0025 PF01527 Transposase XCVd0026 PF01609 Transposase DDE domain XCVd0026 PF05598 XCVd0026 XCVd0033 PF01551 Peptidase family M23 XCVd0036 PF01131 DNA topoisomerase XCVd0044 PF05951 XCVd0044 XCVd0045 PF13098 Thioredoxin-like domain XCVd0047 PF08401 XCVd0047 XCVd0049 PF00772 DnaB-like helicase N terminal domain XCVd0049 PF03796 DnaB-like helicase C terminal domain XCVd0054 PF00580 UvrD/REP helicase N-terminal domain XCVd0054 PF13361 UvrD-like helicase C-terminal domain XCVd0058 PF11740 XCVd0058 XCVd0070 PF11740 XCVd0070 XCVd0071 PF00589 Phage integrase family XCVd0072 PF02810 SEC-C motif XCVd0074 PF00004 ATPase family associated with various cellular activities (AAA) XCVd0074 PF13384 Homeodomain-like domain XCVd0075 PF00082 Subtilase family XCVd0077 PF00196 Bacterial regulatory proteins, luxR family XCVd0079 PF00580 UvrD/REP helicase N-terminal domain XCVd0079 PF06114 Domain of unknown function (DUF955) XCVd0079 PF13361 UvrD-like helicase C-terminal domain XCVd0082 PF14464 Prokaryotic homologs of the JAB domain XCVd0083 PF00899 ThiF family XCVd0090 PF01527 Transposase XCVd0091 PF13276 XCVd0091 XCVd0091 PF13683 XCVd0091 XCVd0094 PF11740 XCVd0094 XCVd0096 PF00589 Phage integrase family XCVd0097 PF01526 XCVd0097 XCVd0097 PF13700 XCVd0097 XCVd0098 PF04796 XCVd0098 XCVd0099 PF06414 Zeta toxin XCVd0101 PF01850 PIN domain XCVd0102 PF04014 Antidote-toxin recognition MazE XCVd0103 PF00239 Resolvase, N terminal domain XCVd0105 PF14566 Inositol hexakisphosphate XCVd0107 PF01527 Transposase XCVd0108 PF00665 Integrase core domain XCVd0109 PF00239 Resolvase, N terminal domain XCVd0110 PF16762 XCVd0110 XCVd0111 PF13470 XCVd0111 XCVd0112 PF01526 XCVd0112 XCVd0112 PF13700 XCVd0112 XCVd0113 PF02810 SEC-C motif XCVd0113 PF03695 Uncharacterised protein family (UPF0149) XCVd0114 PF00589 Phage integrase family XCVd0115 PF01526 XCVd0115 XCVd0115 PF13700 XCVd0115 XCVd0121 PF11672 XCVd0121 XCVd0122 PF00589 Phage integrase family XCVd0126 PF01757 XCVd0126 XCVd0127 PF02599 Global regulator protein family XCVd0128 PF00216 Bacterial DNA-binding protein XCVd0129 PF00436 Single-strand binding protein family XCVd0133 PF01555 DNA methylase XCVd0133 PF14338 XCVd0133 XCVd0134 PF04381 Putative exonuclease, RdgC XCVd0137 PF10411 Disulfide bond isomerase protein N-terminus XCVd0137 PF13098 Thioredoxin-like domain XCVd0138 PF06855 Protein of unknown function (DUF1250) XCVd0139 PF12281 XCVd0139 XCVd0141 PF00176 SNF2 family N-terminal domain XCVd0141 PF00271 Helicase conserved C-terminal domain XCVd0145 PF00145 C-5 cytosine-specific DNA methylase XCVd0150 PF00563 EAL domain XCVd0152 PF01131 DNA topoisomerase XCVd0152 PF01396 XCVd0152 XCVd0152 PF01751 Toprim domain XCVd0155 PF13871 XCVd0155 XCVd0155 PF13872 XCVd0155 XCVd0165 PF13572 XCVd0165 XCVd0168 PF03743 Bacterial conjugation TrbI-like protein XCVd0169 PF12293 XCVd0169 XCVd0170 PF11393 XCVd0170 XCVd0172 PF01051 Initiator Replication protein