XCV0001 SM00382 ATPases associated with a variety of cellular activities XCV0001 SM00760 Bacterial dnaA protein helix-turn-helix domain XCV0002 SM00480 DNA polymerase III beta subunit XCV0004 SM00387 Histidine kinase-like ATPases XCV0004 SM00433 TopoisomeraseII XCV0007 SM00028 Tetratricopeptide repeats XCV0015 SM00155 Phospholipase D. Active site motifs. XCV0018 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV0024 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV0024 SM00245 tail specific protease XCV0034 SM00829 Enoylreductase XCV0055 SM00487 DEAD-like helicases superfamily XCV0055 SM00490 helicase superfamily c-terminal domain XCV0060 SM00822 XCV0060 XCV0063 SM00220 Serine/Threonine protein kinases, catalytic domain XCV0109 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XCV0115 SM00421 helix_turn_helix, Lux Regulon XCV0115 SM00448 cheY-homologous receiver domain XCV0119 SM00862 Transcriptional regulatory protein, C terminal XCV0138 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV0139 SM00642 Alpha-amylase domain XCV0140 SM00642 Alpha-amylase domain XCV0141 SM00642 Alpha-amylase domain XCV0151 SM00354 helix_turn _helix lactose operon repressor XCV0158 SM00344 helix_turn_helix ASNC type XCV0163 SM00382 ATPases associated with a variety of cellular activities XCV0166 SM00382 ATPases associated with a variety of cellular activities XCV0176 SM00855 Phosphoglycerate mutase family XCV0177 SM00867 YceI-like domain XCV0178 SM00155 Phospholipase D. Active site motifs. XCV0180 SM00563 Phosphate acyltransferases XCV0183 SM00028 Tetratricopeptide repeats XCV0185 SM00829 Enoylreductase XCV0188 SM01230 XCV0188 XCV0189 SM00938 Nitrogen regulatory protein P-II XCV0191 SM00387 Histidine kinase-like ATPases XCV0191 SM00388 His Kinase A (phosphoacceptor) domain XCV0192 SM00382 ATPases associated with a variety of cellular activities XCV0192 SM00448 cheY-homologous receiver domain XCV0205 SM00450 Rhodanese Homology Domain XCV0231 SM00387 Histidine kinase-like ATPases XCV0231 SM00388 His Kinase A (phosphoacceptor) domain XCV0232 SM00382 ATPases associated with a variety of cellular activities XCV0232 SM00448 cheY-homologous receiver domain XCV0253 SM00563 Phosphate acyltransferases XCV0260 SM00342 helix_turn_helix, arabinose operon control protein XCV0266 SM00100 Cyclic nucleotide-monophosphate binding domain XCV0266 SM00267 diguanylate cyclase XCV0271 SM00878 Biotin carboxylase C-terminal domain XCV0276 SM00953 XCV0276 XCV0284 SM00833 Cobalamin synthesis protein cobW C-terminal domain XCV0289 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV0295 SM00829 Enoylreductase XCV0300 SM00487 DEAD-like helicases superfamily XCV0300 SM00490 helicase superfamily c-terminal domain XCV0300 SM00847 Helicase associated domain (HA2) Add an annotation XCV0327 SM00422 helix_turn_helix, mercury resistance XCV0334 SM00448 cheY-homologous receiver domain XCV0334 SM00862 Transcriptional regulatory protein, C terminal XCV0335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV0335 SM00387 Histidine kinase-like ATPases XCV0335 SM00388 His Kinase A (phosphoacceptor) domain XCV0363 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV0364 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV0368 SM00342 helix_turn_helix, arabinose operon control protein XCV0375 SM00420 helix_turn_helix, Deoxyribose operon repressor XCV0375 SM01134 XCV0375 XCV0378 SM00882 Coenzyme A transferase XCV0379 SM00882 Coenzyme A transferase XCV0383 SM00998 Adenylosuccinate lyase C-terminus XCV0387 SM00346 helix_turn_helix isocitrate lyase regulation XCV0388 SM00090 RIO-like kinase XCV0391 SM01228 XCV0391 XCV0403 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV0403 SM00876 Biotin and Thiamin Synthesis associated domain XCV0408 SM00369 Leucine-rich repeats, typical (most populated) subfamily XCV0432 SM00382 ATPases associated with a variety of cellular activities XCV0436 SM01126 XCV0436 XCV0450 SM00267 diguanylate cyclase XCV0452 SM00642 Alpha-amylase domain XCV0453 SM00642 Alpha-amylase domain XCV0455 SM00642 Alpha-amylase domain XCV0457 SM00642 Alpha-amylase domain XCV0467 SM00822 XCV0467 XCV0470 SM00487 DEAD-like helicases superfamily XCV0470 SM00490 helicase superfamily c-terminal domain XCV0474 SM00326 Src homology 3 domains XCV0475 SM00861 Transketolase, pyrimidine binding domain XCV0477 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XCV0481 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV0501 SM00271 DnaJ molecular chaperone homology domain XCV0504 SM00046 Diacylglycerol kinase catalytic domain (presumed) XCV0509 SM00487 DEAD-like helicases superfamily XCV0515 SM00903 Flavin reductase like domain XCV0519 SM00100 Cyclic nucleotide-monophosphate binding domain XCV0519 SM00419 helix_turn_helix, cAMP Regulatory protein XCV0528 SM00073 Histidine Phosphotransfer domain XCV0528 SM00387 Histidine kinase-like ATPases XCV0528 SM00388 His Kinase A (phosphoacceptor) domain XCV0528 SM00448 cheY-homologous receiver domain XCV0529 SM00052 Putative diguanylate phosphodiesterase XCV0529 SM00267 diguanylate cyclase XCV0529 SM00448 cheY-homologous receiver domain XCV0541 SM00563 Phosphate acyltransferases XCV0545 SM01209 XCV0545 XCV0545 SM01210 XCV0545 XCV0547 SM00798 AICARFT/IMPCHase bienzyme XCV0547 SM00851 MGS-like domain XCV0550 SM00195 Dual specificity phosphatase, catalytic domain XCV0554 SM00563 Phosphate acyltransferases XCV0558 SM00530 Helix-turn-helix XRE-family like proteins XCV0563 SM00878 Biotin carboxylase C-terminal domain XCV0570 SM00883 Chaperonin 10 Kd subunit XCV0583 SM00944 Pro-kumamolisin, activation domain XCV0588 SM00867 YceI-like domain XCV0600 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCV0602 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV0602 SM00895 XCV0602 XCV0606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV0606 SM00331 Sigma factor PP2C-like phosphatases XCV0612 SM00382 ATPases associated with a variety of cellular activities XCV0615 SM01321 XCV0615 XCV0623 SM01321 XCV0623 XCV0628 SM00342 helix_turn_helix, arabinose operon control protein XCV0645 SM00267 diguanylate cyclase XCV0653 SM00062 Bacterial periplasmic substrate-binding proteins XCV0662 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCV0662 SM01232 XCV0662 XCV0665 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV0667 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV0667 SM00091 PAS domain XCV0667 SM00267 diguanylate cyclase XCV0669 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV0669 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV0669 SM01049 XCV0669 XCV0670 SM00637 XCV0670 XCV0672 SM00267 diguanylate cyclase XCV0678 SM00448 cheY-homologous receiver domain XCV0678 SM00850 LytTr DNA-binding domain XCV0693 SM00382 ATPases associated with a variety of cellular activities XCV0693 SM01086 C-terminal, D2-small domain, of ClpB protein XCV0699 SM00267 diguanylate cyclase XCV0700 SM01263 XCV0700 XCV0708 SM00564 beta-propeller repeat XCV0709 SM00564 beta-propeller repeat XCV0710 SM00062 Bacterial periplasmic substrate-binding proteins XCV0710 SM00248 ankyrin repeats XCV0713 SM00829 Enoylreductase XCV0715 SM00382 ATPases associated with a variety of cellular activities XCV0717 SM00268 Actin XCV0722 SM00710 Parallel beta-helix repeats XCV0725 SM00936 Penicillin-binding protein 5, C-terminal domain XCV0729 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV0730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV0730 SM00245 tail specific protease XCV0741 SM01350 XCV0741 XCV0743 SM00749 bacterial OsmY and nodulation domain XCV0744 SM00387 Histidine kinase-like ATPases XCV0744 SM00388 His Kinase A (phosphoacceptor) domain XCV0745 SM00448 cheY-homologous receiver domain XCV0746 SM00387 Histidine kinase-like ATPases XCV0746 SM00388 His Kinase A (phosphoacceptor) domain XCV0746 SM00448 cheY-homologous receiver domain XCV0752 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCV0757 SM00382 ATPases associated with a variety of cellular activities XCV0767 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV0767 SM00866 XCV0767 XCV0769 SM00354 helix_turn _helix lactose operon repressor XCV0783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV0783 SM00387 Histidine kinase-like ATPases XCV0783 SM00388 His Kinase A (phosphoacceptor) domain XCV0784 SM00448 cheY-homologous receiver domain XCV0784 SM00862 Transcriptional regulatory protein, C terminal XCV0788 SM00829 Enoylreductase XCV0792 SM00382 ATPases associated with a variety of cellular activities XCV0805 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCV0811 SM00387 Histidine kinase-like ATPases XCV0811 SM00388 His Kinase A (phosphoacceptor) domain XCV0812 SM00448 cheY-homologous receiver domain XCV0812 SM00862 Transcriptional regulatory protein, C terminal XCV0834 SM00842 Cell division protein FtsA XCV0835 SM00864 Tubulin/FtsZ family, GTPase domain XCV0835 SM00865 Tubulin/FtsZ family, C-terminal domain XCV0839 SM00957 SecA DEAD-like domain XCV0839 SM00958 SecA preprotein cross-linking domain XCV0844 SM00829 Enoylreductase XCV0845 SM00944 Pro-kumamolisin, activation domain XCV0856 SM00996 S-adenosyl-L-homocysteine hydrolase XCV0856 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCV0881 SM00382 ATPases associated with a variety of cellular activities XCV0885 SM00382 ATPases associated with a variety of cellular activities XCV0887 SM00448 cheY-homologous receiver domain XCV0887 SM00862 Transcriptional regulatory protein, C terminal XCV0888 SM00387 Histidine kinase-like ATPases XCV0888 SM00388 His Kinase A (phosphoacceptor) domain XCV0900 SM00650 Ribosomal RNA adenine dimethylases XCV0912 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV0912 SM00895 XCV0912 XCV0919 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV0933 SM00448 cheY-homologous receiver domain XCV0934 SM00387 Histidine kinase-like ATPases XCV0934 SM00388 His Kinase A (phosphoacceptor) domain XCV0934 SM00448 cheY-homologous receiver domain XCV0935 SM00421 helix_turn_helix, Lux Regulon XCV0948 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCV0948 SM00475 5'-3' exonuclease XCV0951 SM01002 Alanine dehydrogenase/PNT, C-terminal domain XCV0951 SM01003 Alanine dehydrogenase/PNT, N-terminal domain XCV0973 SM00852 Probable molybdopterin binding domain XCV0974 SM00028 Tetratricopeptide repeats XCV0975 SM00937 XCV0975 XCV0977 SM00028 Tetratricopeptide repeats XCV0980 SM01400 XCV0980 XCV0986 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XCV0986 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCV0987 SM00649 Ribosomal protein L11/L12 XCV0992 SM00663 RNA polymerase I subunit A N-terminus XCV0995 SM00838 Elongation factor G C-terminus XCV0995 SM00889 Elongation factor G, domain IV XCV0998 SM01403 XCV0998 XCV1002 SM01382 XCV1002 XCV1002 SM01383 XCV1002 XCV1005 SM00322 K homology RNA-binding domain XCV1009 SM01374 XCV1009 XCV1010 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCV1022 SM00363 S4 RNA-binding domain XCV1022 SM01390 XCV1022 XCV1023 SM00662 RNA polymerases D XCV1032 SM00838 Elongation factor G C-terminus XCV1041 SM00829 Enoylreductase XCV1050 SM00382 ATPases associated with a variety of cellular activities XCV1052 SM00829 Enoylreductase XCV1057 SM00855 Phosphoglycerate mutase family XCV1067 SM00014 Acid phosphatase homologues XCV1071 SM00091 PAS domain XCV1071 SM00387 Histidine kinase-like ATPases XCV1071 SM00388 His Kinase A (phosphoacceptor) domain XCV1072 SM00448 cheY-homologous receiver domain XCV1072 SM00862 Transcriptional regulatory protein, C terminal XCV1076 SM01329 XCV1076 XCV1079 SM00091 PAS domain XCV1079 SM00387 Histidine kinase-like ATPases XCV1082 SM00382 ATPases associated with a variety of cellular activities XCV1082 SM00994 ClpX C4-type zinc finger XCV1082 SM01086 C-terminal, D2-small domain, of ClpB protein XCV1083 SM00382 ATPases associated with a variety of cellular activities XCV1083 SM00464 Found in ATP-dependent protease La (LON) XCV1084 SM00411 bacterial (prokaryotic) histone like domain XCV1086 SM00257 Lysin motif XCV1087 SM00849 Metallo-beta-lactamase superfamily XCV1090 SM00479 XCV1090 XCV1091 SM00331 Sigma factor PP2C-like phosphatases XCV1091 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XCV1100 SM00530 Helix-turn-helix XRE-family like proteins XCV1104 SM00849 Metallo-beta-lactamase superfamily XCV1105 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV1121 SM00465 GIY-YIG type nucleases (URI domain) XCV1127 SM00382 ATPases associated with a variety of cellular activities XCV1129 SM00493 XCV1129 XCV1132 SM00460 Transglutaminase/protease-like homologues XCV1134 SM00382 ATPases associated with a variety of cellular activities XCV1145 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCV1146 SM00822 XCV1146 XCV1148 SM00825 Beta-ketoacyl synthase XCV1155 SM00382 ATPases associated with a variety of cellular activities XCV1164 SM01359 XCV1164 XCV1164 SM01360 XCV1164 XCV1173 SM00271 DnaJ molecular chaperone homology domain XCV1174 SM00448 cheY-homologous receiver domain XCV1175 SM00244 prohibitin homologues XCV1176 SM00244 prohibitin homologues XCV1177 SM01321 XCV1177 XCV1178 SM00788 Adenylosuccinate synthetase XCV1181 SM00822 XCV1181 XCV1194 SM00487 DEAD-like helicases superfamily XCV1196 SM00220 Serine/Threonine protein kinases, catalytic domain XCV1200 SM00855 Phosphoglycerate mutase family XCV1210 SM00052 Putative diguanylate phosphodiesterase XCV1211 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV1214 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCV1215 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCV1218 SM00974 XCV1218 XCV1222 SM00966 SpoVT / AbrB like domain XCV1226 SM00481 DNA polymerase alpha chain like domain XCV1228 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV1235 SM00091 PAS domain XCV1235 SM00342 helix_turn_helix, arabinose operon control protein XCV1240 SM01060 XCV1240 XCV1246 SM00382 ATPases associated with a variety of cellular activities XCV1253 SM00448 cheY-homologous receiver domain XCV1253 SM00862 Transcriptional regulatory protein, C terminal XCV1254 SM00387 Histidine kinase-like ATPases XCV1254 SM00388 His Kinase A (phosphoacceptor) domain XCV1261 SM00421 helix_turn_helix, Lux Regulon XCV1261 SM00448 cheY-homologous receiver domain XCV1264 SM00478 endonuclease III XCV1268 SM00244 prohibitin homologues XCV1289 SM00904 Riboflavin kinase XCV1311 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV1312 SM00382 ATPases associated with a variety of cellular activities XCV1314 SM00862 Transcriptional regulatory protein, C terminal XCV1315 SM00342 helix_turn_helix, arabinose operon control protein XCV1321 SM00387 Histidine kinase-like ATPases XCV1323 SM00387 Histidine kinase-like ATPases XCV1323 SM00388 His Kinase A (phosphoacceptor) domain XCV1324 SM00387 Histidine kinase-like ATPases XCV1324 SM00388 His Kinase A (phosphoacceptor) domain XCV1324 SM00448 cheY-homologous receiver domain XCV1329 SM00387 Histidine kinase-like ATPases XCV1329 SM00388 His Kinase A (phosphoacceptor) domain XCV1329 SM00448 cheY-homologous receiver domain XCV1331 SM00138 Methyltransferase, chemotaxis proteins XCV1332 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV1332 SM00387 Histidine kinase-like ATPases XCV1332 SM00388 His Kinase A (phosphoacceptor) domain XCV1332 SM00448 cheY-homologous receiver domain XCV1333 SM00091 PAS domain XCV1333 SM00387 Histidine kinase-like ATPases XCV1333 SM00388 His Kinase A (phosphoacceptor) domain XCV1334 SM00448 cheY-homologous receiver domain XCV1335 SM00813 Alpha-L-arabinofuranosidase C-terminus XCV1338 SM00382 ATPases associated with a variety of cellular activities XCV1338 SM00962 SRP54-type protein, GTPase domain XCV1338 SM00963 SRP54-type protein, helical bundle domain XCV1349 SM00363 S4 RNA-binding domain XCV1352 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XCV1352 SM00534 ATPase domain of DNA mismatch repair MUTS family XCV1357 SM00812 Alpha-L-fucosidase XCV1362 SM00530 Helix-turn-helix XRE-family like proteins XCV1372 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV1373 SM00838 Elongation factor G C-terminus XCV1376 SM00358 Double-stranded RNA binding motif XCV1376 SM00535 Ribonuclease III family XCV1380 SM00448 cheY-homologous receiver domain XCV1382 SM01118 XCV1382 XCV1389 SM00357 Cold shock protein domain XCV1393 SM00487 DEAD-like helicases superfamily XCV1393 SM00490 helicase superfamily c-terminal domain XCV1398 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV1398 SM00267 diguanylate cyclase XCV1402 SM00869 Autotransporter beta-domain XCV1403 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCV1404 SM00671 Sel1-like repeats. XCV1404 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCV1463 SM00481 DNA polymerase alpha chain like domain XCV1471 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV1477 SM00267 diguanylate cyclase XCV1481 SM00972 Spore Coat Protein U domain XCV1484 SM00972 Spore Coat Protein U domain XCV1486 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV1490 SM01172 XCV1490 XCV1491 SM00710 Parallel beta-helix repeats XCV1491 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XCV1497 SM00434 DNA Topoisomerase IV XCV1498 SM00342 helix_turn_helix, arabinose operon control protein XCV1499 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV1505 SM01217 XCV1505 XCV1506 SM00631 XCV1506 XCV1512 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV1516 SM00382 ATPases associated with a variety of cellular activities XCV1519 SM00947 Carbonic anhydrase XCV1522 SM00357 Cold shock protein domain XCV1544 SM00267 diguanylate cyclase XCV1546 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV1546 SM00267 diguanylate cyclase XCV1565 SM00271 DnaJ molecular chaperone homology domain XCV1573 SM00382 ATPases associated with a variety of cellular activities XCV1578 SM00861 Transketolase, pyrimidine binding domain XCV1580 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCV1584 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV1584 SM01091 Transporter associated domain XCV1590 SM00382 ATPases associated with a variety of cellular activities XCV1591 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV1594 SM00984 UDP binding domain XCV1598 SM00354 helix_turn _helix lactose operon repressor XCV1602 SM01018 B12 binding domain XCV1604 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCV1607 SM00316 Ribosomal protein S1-like RNA-binding domain XCV1607 SM00357 Cold shock protein domain XCV1607 SM00955 XCV1607 XCV1609 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCV1610 SM00267 diguanylate cyclase XCV1611 SM00479 XCV1611 XCV1614 SM00382 ATPases associated with a variety of cellular activities XCV1621 SM00947 Carbonic anhydrase XCV1623 SM00478 endonuclease III XCV1628 SM00450 Rhodanese Homology Domain XCV1630 SM00644 XCV1630 XCV1635 SM00981 XCV1635 XCV1640 SM00479 XCV1640 XCV1646 SM00947 Carbonic anhydrase XCV1654 SM00421 helix_turn_helix, Lux Regulon XCV1654 SM00448 cheY-homologous receiver domain XCV1664 SM00968 SMC proteins Flexible Hinge Domain XCV1665 SM00771 ZipA, C-terminal domain (FtsZ-binding) XCV1668 SM00292 breast cancer carboxy-terminal domain XCV1668 SM00532 Ligase N family XCV1672 SM00434 DNA Topoisomerase IV XCV1673 SM00564 beta-propeller repeat XCV1682 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV1682 SM00866 XCV1682 XCV1686 SM00240 Forkhead associated domain XCV1690 SM00830 Chorismate mutase type II XCV1702 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1702 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1704 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV1705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV1705 SM00091 PAS domain XCV1705 SM00387 Histidine kinase-like ATPases XCV1705 SM00388 His Kinase A (phosphoacceptor) domain XCV1705 SM00448 cheY-homologous receiver domain XCV1706 SM00448 cheY-homologous receiver domain XCV1707 SM00382 ATPases associated with a variety of cellular activities XCV1708 SM00091 PAS domain XCV1708 SM00387 Histidine kinase-like ATPases XCV1708 SM00388 His Kinase A (phosphoacceptor) domain XCV1708 SM00448 cheY-homologous receiver domain XCV1735 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV1737 SM00382 ATPases associated with a variety of cellular activities XCV1743 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV1743 SM01091 Transporter associated domain XCV1748 SM00387 Histidine kinase-like ATPases XCV1748 SM00433 TopoisomeraseII XCV1752 SM01192 XCV1752 XCV1752 SM01193 XCV1752 XCV1757 SM00463 Small MutS-related domain XCV1761 SM00257 Lysin motif XCV1763 SM01103 XCV1763 XCV1765 SM00382 ATPases associated with a variety of cellular activities XCV1773 SM00382 ATPases associated with a variety of cellular activities XCV1775 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCV1778 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV1778 SM00091 PAS domain XCV1778 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1787 SM00670 Large family of predicted nucleotide-binding domains XCV1791 SM01130 XCV1791 XCV1796 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCV1805 SM00758 XCV1805 XCV1812 SM00646 XCV1812 XCV1825 SM00052 Putative diguanylate phosphodiesterase XCV1825 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV1825 SM00267 diguanylate cyclase XCV1827 SM00448 cheY-homologous receiver domain XCV1828 SM00387 Histidine kinase-like ATPases XCV1830 SM00014 Acid phosphatase homologues XCV1858 SM00342 helix_turn_helix, arabinose operon control protein XCV1858 SM00871 Bacterial transcription activator, effector binding domain XCV1860 SM00912 haemagglutination activity domain XCV1871 SM00100 Cyclic nucleotide-monophosphate binding domain XCV1871 SM00419 helix_turn_helix, cAMP Regulatory protein XCV1886 SM01007 Class II Aldolase and Adducin N-terminal domain XCV1895 SM00841 Elongation factor P, C-terminal XCV1895 SM01185 XCV1895 XCV1896 SM00822 XCV1896 XCV1900 SM00899 XCV1900 XCV1907 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XCV1909 SM00851 MGS-like domain XCV1909 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCV1914 SM00850 LytTr DNA-binding domain XCV1915 SM00937 XCV1915 XCV1917 SM00448 cheY-homologous receiver domain XCV1917 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV1919 SM00073 Histidine Phosphotransfer domain XCV1919 SM00387 Histidine kinase-like ATPases XCV1919 SM00388 His Kinase A (phosphoacceptor) domain XCV1919 SM00448 cheY-homologous receiver domain XCV1925 SM00966 SpoVT / AbrB like domain XCV1929 SM00052 Putative diguanylate phosphodiesterase XCV1929 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV1929 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV1929 SM00091 PAS domain XCV1929 SM00267 diguanylate cyclase XCV1930 SM00448 cheY-homologous receiver domain XCV1932 SM00138 Methyltransferase, chemotaxis proteins XCV1933 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1933 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1935 SM00260 Two component signalling adaptor domain XCV1938 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1938 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1939 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1939 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1941 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1941 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1942 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1942 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1944 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1944 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1947 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1947 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1948 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1951 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1951 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1952 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1952 SM01049 XCV1952 XCV1954 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1954 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV1955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV1956 SM00073 Histidine Phosphotransfer domain XCV1956 SM00260 Two component signalling adaptor domain XCV1956 SM00387 Histidine kinase-like ATPases XCV1956 SM01231 XCV1956 XCV1957 SM00448 cheY-homologous receiver domain XCV1959 SM00260 Two component signalling adaptor domain XCV1974 SM00073 Histidine Phosphotransfer domain XCV1974 SM00260 Two component signalling adaptor domain XCV1974 SM00387 Histidine kinase-like ATPases XCV1974 SM01231 XCV1974 XCV1976 SM00448 cheY-homologous receiver domain XCV1979 SM00382 ATPases associated with a variety of cellular activities XCV1979 SM00962 SRP54-type protein, GTPase domain XCV1982 SM00052 Putative diguanylate phosphodiesterase XCV1982 SM00267 diguanylate cyclase XCV1983 SM00267 diguanylate cyclase XCV1985 SM00267 diguanylate cyclase XCV1995 SM00382 ATPases associated with a variety of cellular activities XCV2009 SM00822 XCV2009 XCV2014 SM00382 ATPases associated with a variety of cellular activities XCV2015 SM00448 cheY-homologous receiver domain XCV2017 SM00421 helix_turn_helix, Lux Regulon XCV2017 SM00448 cheY-homologous receiver domain XCV2025 SM00047 Lysozyme subfamily 2 XCV2034 SM00260 Two component signalling adaptor domain XCV2034 SM00448 cheY-homologous receiver domain XCV2035 SM00858 XCV2035 XCV2038 SM00387 Histidine kinase-like ATPases XCV2039 SM00052 Putative diguanylate phosphodiesterase XCV2039 SM00267 diguanylate cyclase XCV2039 SM00448 cheY-homologous receiver domain XCV2040 SM00091 PAS domain XCV2040 SM00387 Histidine kinase-like ATPases XCV2041 SM00052 Putative diguanylate phosphodiesterase XCV2041 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV2041 SM00091 PAS domain XCV2041 SM00267 diguanylate cyclase XCV2044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV2049 SM00382 ATPases associated with a variety of cellular activities XCV2049 SM01086 C-terminal, D2-small domain, of ClpB protein XCV2051 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2056 SM00382 ATPases associated with a variety of cellular activities XCV2056 SM00843 XCV2056 XCV2060 SM00382 ATPases associated with a variety of cellular activities XCV2066 SM00562 XCV2066 XCV2068 SM00028 Tetratricopeptide repeats XCV2071 SM00564 beta-propeller repeat XCV2072 SM00382 ATPases associated with a variety of cellular activities XCV2073 SM00852 Probable molybdopterin binding domain XCV2074 SM00450 Rhodanese Homology Domain XCV2083 SM00852 Probable molybdopterin binding domain XCV2086 SM00342 helix_turn_helix, arabinose operon control protein XCV2087 SM00822 XCV2087 XCV2090 SM00448 cheY-homologous receiver domain XCV2090 SM01012 XCV2090 XCV2095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XCV2102 SM00052 Putative diguanylate phosphodiesterase XCV2103 SM00869 Autotransporter beta-domain XCV2104 SM00421 helix_turn_helix, Lux Regulon XCV2104 SM00448 cheY-homologous receiver domain XCV2105 SM00387 Histidine kinase-like ATPases XCV2105 SM00388 His Kinase A (phosphoacceptor) domain XCV2109 SM00869 Autotransporter beta-domain XCV2112 SM00448 cheY-homologous receiver domain XCV2112 SM00850 LytTr DNA-binding domain XCV2127 SM00382 ATPases associated with a variety of cellular activities XCV2127 SM01086 C-terminal, D2-small domain, of ClpB protein XCV2135 SM00240 Forkhead associated domain XCV2140 SM00331 Sigma factor PP2C-like phosphatases XCV2140 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XCV2145 SM00387 Histidine kinase-like ATPases XCV2147 SM00448 cheY-homologous receiver domain XCV2147 SM00862 Transcriptional regulatory protein, C terminal XCV2151 SM00421 helix_turn_helix, Lux Regulon XCV2153 SM00421 helix_turn_helix, Lux Regulon XCV2153 SM00448 cheY-homologous receiver domain XCV2155 SM00387 Histidine kinase-like ATPases XCV2167 SM00974 XCV2167 XCV2170 SM00829 Enoylreductase XCV2182 SM00342 helix_turn_helix, arabinose operon control protein XCV2186 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV2187 SM00421 helix_turn_helix, Lux Regulon XCV2187 SM00448 cheY-homologous receiver domain XCV2188 SM00387 Histidine kinase-like ATPases XCV2189 SM00342 helix_turn_helix, arabinose operon control protein XCV2198 SM00529 Helix-turn-helix diphteria tox regulatory element XCV2200 SM00479 XCV2200 XCV2214 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2214 SM00732 Likely ribonuclease with RNase H fold. XCV2215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV2215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV2215 SM00091 PAS domain XCV2215 SM00387 Histidine kinase-like ATPases XCV2215 SM00388 His Kinase A (phosphoacceptor) domain XCV2215 SM00448 cheY-homologous receiver domain XCV2216 SM00448 cheY-homologous receiver domain XCV2238 SM00382 ATPases associated with a variety of cellular activities XCV2249 SM00382 ATPases associated with a variety of cellular activities XCV2251 SM00849 Metallo-beta-lactamase superfamily XCV2254 SM00382 ATPases associated with a variety of cellular activities XCV2257 SM00226 Low molecular weight phosphatase family XCV2259 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCV2259 SM00465 GIY-YIG type nucleases (URI domain) XCV2287 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCV2287 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCV2287 SM00493 XCV2287 XCV2300 SM00530 Helix-turn-helix XRE-family like proteins XCV2309 SM00448 cheY-homologous receiver domain XCV2309 SM00862 Transcriptional regulatory protein, C terminal XCV2310 SM00387 Histidine kinase-like ATPases XCV2310 SM00388 His Kinase A (phosphoacceptor) domain XCV2314 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCV2314 SM00450 Rhodanese Homology Domain XCV2324 SM00986 Uracil DNA glycosylase superfamily XCV2324 SM00987 UreE urease accessory protein, C-terminal domain XCV2327 SM00857 Resolvase, N terminal domain XCV2333 SM00829 Enoylreductase XCV2335 SM00422 helix_turn_helix, mercury resistance XCV2337 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCV2346 SM00342 helix_turn_helix, arabinose operon control protein XCV2358 SM00953 XCV2358 XCV2386 SM00487 DEAD-like helicases superfamily XCV2406 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCV2406 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCV2406 SM00493 XCV2406 XCV2417 SM00984 UDP binding domain XCV2421 SM00450 Rhodanese Homology Domain XCV2422 SM00421 helix_turn_helix, Lux Regulon XCV2422 SM00448 cheY-homologous receiver domain XCV2423 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2424 SM00363 S4 RNA-binding domain XCV2436 SM01126 XCV2436 XCV2445 SM00849 Metallo-beta-lactamase superfamily XCV2446 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCV2449 SM00342 helix_turn_helix, arabinose operon control protein XCV2476 SM00382 ATPases associated with a variety of cellular activities XCV2486 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV2486 SM01240 XCV2486 XCV2491 SM00822 XCV2491 XCV2493 SM00028 Tetratricopeptide repeats XCV2495 SM00411 bacterial (prokaryotic) histone like domain XCV2496 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2511 SM00354 helix_turn _helix lactose operon repressor XCV2517 SM00363 S4 RNA-binding domain XCV2522 SM00382 ATPases associated with a variety of cellular activities XCV2532 SM00357 Cold shock protein domain XCV2533 SM00382 ATPases associated with a variety of cellular activities XCV2534 SM00382 ATPases associated with a variety of cellular activities XCV2539 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCV2542 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XCV2545 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCV2553 SM00840 XCV2553 XCV2558 SM01234 XCV2558 XCV2566 SM00849 Metallo-beta-lactamase superfamily XCV2569 SM00656 XCV2569 XCV2577 SM00841 Elongation factor P, C-terminal XCV2577 SM01185 XCV2577 XCV2579 SM00052 Putative diguanylate phosphodiesterase XCV2579 SM00267 diguanylate cyclase XCV2579 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV2586 SM00382 ATPases associated with a variety of cellular activities XCV2587 SM00487 DEAD-like helicases superfamily XCV2587 SM00490 helicase superfamily c-terminal domain XCV2592 SM00357 Cold shock protein domain XCV2593 SM01322 XCV2593 XCV2595 SM00052 Putative diguanylate phosphodiesterase XCV2595 SM00267 diguanylate cyclase XCV2598 SM00822 XCV2598 XCV2602 SM00853 MutL C terminal dimerisation domain XCV2602 SM01340 XCV2602 XCV2603 SM00646 XCV2603 XCV2611 SM00474 3'-5' exonuclease XCV2614 SM00528 Domain in histone-like proteins of HNS family XCV2619 SM00530 Helix-turn-helix XRE-family like proteins XCV2623 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV2623 SM00267 diguanylate cyclase XCV2624 SM00260 Two component signalling adaptor domain XCV2625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV2625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV2627 SM00487 DEAD-like helicases superfamily XCV2627 SM00490 helicase superfamily c-terminal domain XCV2638 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV2644 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV2644 SM01091 Transporter associated domain XCV2656 SM01230 XCV2656 XCV2658 SM01230 XCV2658 XCV2660 SM00267 diguanylate cyclase XCV2660 SM00448 cheY-homologous receiver domain XCV2671 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV2671 SM00091 PAS domain XCV2671 SM00387 Histidine kinase-like ATPases XCV2671 SM00388 His Kinase A (phosphoacceptor) domain XCV2671 SM00448 cheY-homologous receiver domain XCV2671 SM01079 XCV2671 XCV2672 SM00448 cheY-homologous receiver domain XCV2672 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV2678 SM00354 helix_turn _helix lactose operon repressor XCV2694 SM01323 XCV2694 XCV2697 SM00344 helix_turn_helix ASNC type XCV2711 SM00387 Histidine kinase-like ATPases XCV2734 SM00944 Pro-kumamolisin, activation domain XCV2744 SM01130 XCV2744 XCV2749 SM00342 helix_turn_helix, arabinose operon control protein XCV2750 SM00382 ATPases associated with a variety of cellular activities XCV2750 SM00962 SRP54-type protein, GTPase domain XCV2750 SM00963 SRP54-type protein, helical bundle domain XCV2752 SM00478 endonuclease III XCV2754 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV2754 SM00091 PAS domain XCV2754 SM00387 Histidine kinase-like ATPases XCV2754 SM00388 His Kinase A (phosphoacceptor) domain XCV2754 SM00448 cheY-homologous receiver domain XCV2763 SM00507 HNH nucleases XCV2764 SM00861 Transketolase, pyrimidine binding domain XCV2769 SM00849 Metallo-beta-lactamase superfamily XCV2788 SM00422 helix_turn_helix, mercury resistance XCV2789 SM00411 bacterial (prokaryotic) histone like domain XCV2790 SM00873 B3/4 domain XCV2790 SM00874 tRNA synthetase B5 domain XCV2790 SM00896 Ferredoxin-fold anticodon binding domain XCV2795 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCV2796 SM00354 helix_turn _helix lactose operon repressor XCV2797 SM00642 Alpha-amylase domain XCV2803 SM00642 Alpha-amylase domain XCV2812 SM00487 DEAD-like helicases superfamily XCV2812 SM00490 helicase superfamily c-terminal domain XCV2829 SM01001 AIR carboxylase XCV2833 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2833 SM00322 K homology RNA-binding domain XCV2834 SM01387 XCV2834 XCV2838 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2838 SM00322 K homology RNA-binding domain XCV2847 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCV2848 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCV2856 SM00822 XCV2856 XCV2860 SM00052 Putative diguanylate phosphodiesterase XCV2860 SM00267 diguanylate cyclase XCV2860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV2875 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCV2881 SM00257 Lysin motif XCV2887 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV2901 SM01160 XCV2901 XCV2913 SM00098 Alkaline phosphatase homologues XCV2914 SM00977 TilS substrate C-terminal domain XCV2918 SM01351 XCV2918 XCV2927 SM00316 Ribosomal protein S1-like RNA-binding domain XCV2949 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCV2956 SM00382 ATPases associated with a variety of cellular activities XCV2964 SM00448 cheY-homologous receiver domain XCV2964 SM00862 Transcriptional regulatory protein, C terminal XCV2965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV2965 SM00387 Histidine kinase-like ATPases XCV2965 SM00388 His Kinase A (phosphoacceptor) domain XCV2971 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV2971 SM00267 diguanylate cyclase XCV2972 SM00363 S4 RNA-binding domain XCV2973 SM00052 Putative diguanylate phosphodiesterase XCV2973 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV2973 SM00091 PAS domain XCV2973 SM00267 diguanylate cyclase XCV2974 SM00487 DEAD-like helicases superfamily XCV2974 SM00490 helicase superfamily c-terminal domain XCV2983 SM00342 helix_turn_helix, arabinose operon control protein XCV2983 SM00478 endonuclease III XCV2983 SM01009 AlkA N-terminal domain XCV2998 SM00342 helix_turn_helix, arabinose operon control protein XCV3013 SM00645 Papain family cysteine protease XCV3014 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV3014 SM00387 Histidine kinase-like ATPases XCV3014 SM00388 His Kinase A (phosphoacceptor) domain XCV3015 SM00448 cheY-homologous receiver domain XCV3015 SM00862 Transcriptional regulatory protein, C terminal XCV3018 SM00487 DEAD-like helicases superfamily XCV3018 SM00490 helicase superfamily c-terminal domain XCV3018 SM00982 XCV3018 XCV3018 SM01058 CarD-like/TRCF domain XCV3020 SM00073 Histidine Phosphotransfer domain XCV3020 SM00260 Two component signalling adaptor domain XCV3020 SM00387 Histidine kinase-like ATPases XCV3020 SM01231 XCV3020 XCV3021 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV3021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV3022 SM00260 Two component signalling adaptor domain XCV3023 SM00052 Putative diguanylate phosphodiesterase XCV3023 SM00448 cheY-homologous receiver domain XCV3024 SM00138 Methyltransferase, chemotaxis proteins XCV3025 SM00448 cheY-homologous receiver domain XCV3026 SM00155 Phospholipase D. Active site motifs. XCV3029 SM00855 Phosphoglycerate mutase family XCV3038 SM00248 ankyrin repeats XCV3044 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCV3045 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCV3047 SM00829 Enoylreductase XCV3048 SM00267 diguanylate cyclase XCV3062 SM00732 Likely ribonuclease with RNase H fold. XCV3068 SM00382 ATPases associated with a variety of cellular activities XCV3071 SM00411 bacterial (prokaryotic) histone like domain XCV3077 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XCV3080 SM00382 ATPases associated with a variety of cellular activities XCV3086 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCV3087 SM00671 Sel1-like repeats. XCV3093 SM00054 EF-hand, calcium binding motif XCV3113 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV3117 SM00382 ATPases associated with a variety of cellular activities XCV3126 SM00924 MgtE intracellular N domain XCV3132 SM00656 XCV3132 XCV3135 SM00421 helix_turn_helix, Lux Regulon XCV3143 SM00849 Metallo-beta-lactamase superfamily XCV3145 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCV3149 SM00422 helix_turn_helix, mercury resistance XCV3165 SM00387 Histidine kinase-like ATPases XCV3165 SM00388 His Kinase A (phosphoacceptor) domain XCV3165 SM00448 cheY-homologous receiver domain XCV3166 SM00387 Histidine kinase-like ATPases XCV3166 SM00388 His Kinase A (phosphoacceptor) domain XCV3166 SM00448 cheY-homologous receiver domain XCV3167 SM00387 Histidine kinase-like ATPases XCV3167 SM00388 His Kinase A (phosphoacceptor) domain XCV3167 SM00448 cheY-homologous receiver domain XCV3168 SM00387 Histidine kinase-like ATPases XCV3168 SM00388 His Kinase A (phosphoacceptor) domain XCV3168 SM00448 cheY-homologous receiver domain XCV3169 SM00867 YceI-like domain XCV3171 SM00867 YceI-like domain XCV3182 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV3207 SM00812 Alpha-L-fucosidase XCV3208 SM00636 XCV3208 XCV3211 SM00758 XCV3211 XCV3211 SM01217 XCV3211 XCV3212 SM01149 XCV3212 XCV3220 SM00369 Leucine-rich repeats, typical (most populated) subfamily XCV3223 SM00327 von Willebrand factor (vWF) type A domain XCV3227 SM00260 Two component signalling adaptor domain XCV3229 SM00073 Histidine Phosphotransfer domain XCV3229 SM00260 Two component signalling adaptor domain XCV3229 SM00387 Histidine kinase-like ATPases XCV3229 SM00448 cheY-homologous receiver domain XCV3229 SM01231 XCV3229 XCV3230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV3231 SM00260 Two component signalling adaptor domain XCV3232 SM00448 cheY-homologous receiver domain XCV3233 SM00448 cheY-homologous receiver domain XCV3239 SM00491 XCV3239 XCV3244 SM00954 Region found in RelA / SpoT proteins XCV3253 SM00382 ATPases associated with a variety of cellular activities XCV3253 SM00487 DEAD-like helicases superfamily XCV3253 SM00490 helicase superfamily c-terminal domain XCV3253 SM00847 Helicase associated domain (HA2) Add an annotation XCV3255 SM00341 Helicase and RNase D C-terminal XCV3255 SM00487 DEAD-like helicases superfamily XCV3255 SM00490 helicase superfamily c-terminal domain XCV3255 SM00956 XCV3255 XCV3257 SM00448 cheY-homologous receiver domain XCV3259 SM00363 S4 RNA-binding domain XCV3261 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV3261 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV3266 SM00448 cheY-homologous receiver domain XCV3267 SM00091 PAS domain XCV3267 SM00911 HWE histidine kinase XCV3277 SM00382 ATPases associated with a variety of cellular activities XCV3278 SM00860 SMI1 / KNR4 family XCV3280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCV3288 SM00834 Putative regulatory protein XCV3296 SM00382 ATPases associated with a variety of cellular activities XCV3307 SM01209 XCV3307 XCV3312 SM00342 helix_turn_helix, arabinose operon control protein XCV3312 SM00871 Bacterial transcription activator, effector binding domain XCV3314 SM00855 Phosphoglycerate mutase family XCV3324 SM00382 ATPases associated with a variety of cellular activities XCV3324 SM01086 C-terminal, D2-small domain, of ClpB protein XCV3337 SM00564 beta-propeller repeat XCV3338 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV3348 SM00881 CoA binding domain XCV3350 SM00387 Histidine kinase-like ATPases XCV3350 SM00388 His Kinase A (phosphoacceptor) domain XCV3351 SM00382 ATPases associated with a variety of cellular activities XCV3351 SM00448 cheY-homologous receiver domain XCV3364 SM00387 Histidine kinase-like ATPases XCV3364 SM00388 His Kinase A (phosphoacceptor) domain XCV3365 SM00448 cheY-homologous receiver domain XCV3365 SM00862 Transcriptional regulatory protein, C terminal XCV3368 SM00642 Alpha-amylase domain XCV3370 SM00528 Domain in histone-like proteins of HNS family XCV3372 SM00318 Staphylococcal nuclease homologues XCV3408 SM00528 Domain in histone-like proteins of HNS family XCV3414 SM00869 Autotransporter beta-domain XCV3427 SM00354 helix_turn _helix lactose operon repressor XCV3434 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCV3453 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV3453 SM00387 Histidine kinase-like ATPases XCV3461 SM00506 Appr-1"-p processing enzyme XCV3469 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCV3474 SM00849 Metallo-beta-lactamase superfamily XCV3477 SM00382 ATPases associated with a variety of cellular activities XCV3490 SM00861 Transketolase, pyrimidine binding domain XCV3493 SM00028 Tetratricopeptide repeats XCV3493 SM00327 von Willebrand factor (vWF) type A domain XCV3494 SM00327 von Willebrand factor (vWF) type A domain XCV3496 SM00382 ATPases associated with a variety of cellular activities XCV3497 SM00965 Secretin and TonB N terminus short domain XCV3508 SM00487 DEAD-like helicases superfamily XCV3508 SM00490 helicase superfamily c-terminal domain XCV3510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCV3510 SM00954 Region found in RelA / SpoT proteins XCV3511 SM01409 XCV3511 XCV3512 SM00072 Guanylate kinase homologues. XCV3517 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV3522 SM01011 Aminopeptidase P, N-terminal domain XCV3536 SM00028 Tetratricopeptide repeats XCV3536 SM00382 ATPases associated with a variety of cellular activities XCV3536 SM00421 helix_turn_helix, Lux Regulon XCV3551 SM00464 Found in ATP-dependent protease La (LON) XCV3573 SM00342 helix_turn_helix, arabinose operon control protein XCV3574 SM00862 Transcriptional regulatory protein, C terminal XCV3577 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCV3583 SM00917 LeuA allosteric (dimerisation) domain XCV3584 SM01329 XCV3584 XCV3588 SM00267 diguanylate cyclase XCV3598 SM00919 Malic enzyme, NAD binding domain XCV3598 SM01274 XCV3598 XCV3601 SM00387 Histidine kinase-like ATPases XCV3601 SM00388 His Kinase A (phosphoacceptor) domain XCV3608 SM00421 helix_turn_helix, Lux Regulon XCV3608 SM00448 cheY-homologous receiver domain XCV3610 SM00387 Histidine kinase-like ATPases XCV3610 SM00388 His Kinase A (phosphoacceptor) domain XCV3611 SM00448 cheY-homologous receiver domain XCV3611 SM00862 Transcriptional regulatory protein, C terminal XCV3614 SM00822 XCV3614 XCV3615 SM00354 helix_turn _helix lactose operon repressor XCV3618 SM00642 Alpha-amylase domain XCV3620 SM01154 XCV3620 XCV3626 SM00450 Rhodanese Homology Domain XCV3640 SM00028 Tetratricopeptide repeats XCV3656 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCV3656 SM00866 XCV3656 XCV3668 SM00382 ATPases associated with a variety of cellular activities XCV3674 SM01211 XCV3674 XCV3687 SM00656 XCV3687 XCV3693 SM00528 Domain in histone-like proteins of HNS family XCV3696 SM00382 ATPases associated with a variety of cellular activities XCV3701 SM00882 Coenzyme A transferase XCV3702 SM00882 Coenzyme A transferase XCV3705 SM00984 UDP binding domain XCV3710 SM00893 Electron transfer flavoprotein domain XCV3711 SM00893 Electron transfer flavoprotein domain XCV3721 SM00382 ATPases associated with a variety of cellular activities XCV3726 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV3733 SM00487 DEAD-like helicases superfamily XCV3733 SM00490 helicase superfamily c-terminal domain XCV3737 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV3742 SM00825 Beta-ketoacyl synthase XCV3756 SM00382 ATPases associated with a variety of cellular activities XCV3760 SM00382 ATPases associated with a variety of cellular activities XCV3760 SM00448 cheY-homologous receiver domain XCV3761 SM00387 Histidine kinase-like ATPases XCV3765 SM00830 Chorismate mutase type II XCV3767 SM00382 ATPases associated with a variety of cellular activities XCV3781 SM00986 Uracil DNA glycosylase superfamily XCV3781 SM00987 UreE urease accessory protein, C-terminal domain XCV3789 SM00382 ATPases associated with a variety of cellular activities XCV3789 SM00930 XCV3789 XCV3793 SM00387 Histidine kinase-like ATPases XCV3793 SM00388 His Kinase A (phosphoacceptor) domain XCV3793 SM00448 cheY-homologous receiver domain XCV3804 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV3804 SM00091 PAS domain XCV3804 SM00387 Histidine kinase-like ATPases XCV3804 SM00388 His Kinase A (phosphoacceptor) domain XCV3804 SM00448 cheY-homologous receiver domain XCV3808 SM01005 Alanine racemase, C-terminal domain XCV3810 SM00344 helix_turn_helix ASNC type XCV3822 SM00382 ATPases associated with a variety of cellular activities XCV3824 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XCV3825 SM00986 Uracil DNA glycosylase superfamily XCV3825 SM00987 UreE urease accessory protein, C-terminal domain XCV3826 SM00729 Elongator protein 3, MiaB family, Radical SAM XCV3839 SM00448 cheY-homologous receiver domain XCV3839 SM00850 LytTr DNA-binding domain XCV3840 SM00387 Histidine kinase-like ATPases XCV3849 SM00091 PAS domain XCV3849 SM00138 Methyltransferase, chemotaxis proteins XCV3849 SM00911 HWE histidine kinase XCV3850 SM00448 cheY-homologous receiver domain XCV3852 SM00382 ATPases associated with a variety of cellular activities XCV3852 SM00448 cheY-homologous receiver domain XCV3863 SM00382 ATPases associated with a variety of cellular activities XCV3878 SM00382 ATPases associated with a variety of cellular activities XCV3879 SM00631 XCV3879 XCV3882 SM00477 DNA/RNA non-specific endonuclease XCV3882 SM00892 DNA/RNA non-specific endonuclease XCV3897 SM00822 XCV3897 XCV3927 SM00257 Lysin motif XCV3932 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCV3932 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCV3932 SM00493 XCV3932 XCV3943 SM00487 DEAD-like helicases superfamily XCV3943 SM00490 helicase superfamily c-terminal domain XCV3950 SM00986 Uracil DNA glycosylase superfamily XCV3950 SM00987 UreE urease accessory protein, C-terminal domain XCV3951 SM00448 cheY-homologous receiver domain XCV3953 SM00382 ATPases associated with a variety of cellular activities XCV3954 SM00487 DEAD-like helicases superfamily XCV3954 SM00490 helicase superfamily c-terminal domain XCV3956 SM00357 Cold shock protein domain XCV3956 SM00382 ATPases associated with a variety of cellular activities XCV3956 SM00959 Rho termination factor, N-terminal domain XCV3962 SM00257 Lysin motif XCV3968 SM01150 XCV3968 XCV3978 SM00644 XCV3978 XCV3980 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCV3988 SM01217 XCV3988 XCV3989 SM00905 Dihydroneopterin aldolase XCV3994 SM00400 zinc finger XCV3994 SM00493 XCV3994 XCV3994 SM00766 DNA primase DnaG DnaB-binding XCV4010 SM00363 S4 RNA-binding domain XCV4019 SM00470 ParB-like nuclease domain XCV4023 SM01259 XCV4023 XCV4029 SM00836 DALR anticodon binding domain XCV4029 SM01016 Arginyl tRNA synthetase N terminal dom XCV4035 SM00823 Phosphopantetheine attachment site XCV4035 SM00824 Thioesterase XCV4045 SM00938 Nitrogen regulatory protein P-II XCV4047 SM00382 ATPases associated with a variety of cellular activities XCV4051 SM00052 Putative diguanylate phosphodiesterase XCV4057 SM00244 prohibitin homologues XCV4068 SM00448 cheY-homologous receiver domain XCV4068 SM00862 Transcriptional regulatory protein, C terminal XCV4069 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCV4069 SM00387 Histidine kinase-like ATPases XCV4069 SM00388 His Kinase A (phosphoacceptor) domain XCV4074 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCV4083 SM01060 XCV4083 XCV4086 SM00421 helix_turn_helix, Lux Regulon XCV4086 SM00448 cheY-homologous receiver domain XCV4089 SM00382 ATPases associated with a variety of cellular activities XCV4097 SM00849 Metallo-beta-lactamase superfamily XCV4103 SM00960 Roadblock/LC7 domain XCV4115 SM00387 Histidine kinase-like ATPases XCV4115 SM00388 His Kinase A (phosphoacceptor) domain XCV4116 SM00448 cheY-homologous receiver domain XCV4116 SM00862 Transcriptional regulatory protein, C terminal XCV4121 SM00248 ankyrin repeats XCV4122 SM01060 XCV4122 XCV4123 SM00491 XCV4123 XCV4130 SM00477 DNA/RNA non-specific endonuclease XCV4130 SM00892 DNA/RNA non-specific endonuclease XCV4131 SM01004 Delta-aminolevulinic acid dehydratase XCV4140 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCV4144 SM00382 ATPases associated with a variety of cellular activities XCV4146 SM00530 Helix-turn-helix XRE-family like proteins XCV4152 SM00382 ATPases associated with a variety of cellular activities XCV4163 SM00881 CoA binding domain XCV4164 SM00116 Domain in cystathionine beta-synthase and other proteins. XCV4164 SM00924 MgtE intracellular N domain XCV4165 SM01057 Eukaryotic-type carbonic anhydrase XCV4170 SM00248 ankyrin repeats XCV4172 SM00825 Beta-ketoacyl synthase XCV4178 SM00822 XCV4178 XCV4187 SM00563 Phosphate acyltransferases XCV4200 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCV4200 SM00474 3'-5' exonuclease XCV4200 SM00475 5'-3' exonuclease XCV4200 SM00482 DNA polymerase A domain XCV4203 SM00912 haemagglutination activity domain XCV4207 SM00331 Sigma factor PP2C-like phosphatases XCV4207 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XCV4214 SM00240 Forkhead associated domain XCV4218 SM00028 Tetratricopeptide repeats XCV4220 SM00220 Serine/Threonine protein kinases, catalytic domain XCV4224 SM00965 Secretin and TonB N terminus short domain XCV4226 SM00915 Jacalin-like lectin domain XCV4236 SM00382 ATPases associated with a variety of cellular activities XCV4236 SM01086 C-terminal, D2-small domain, of ClpB protein XCV4244 SM00342 helix_turn_helix, arabinose operon control protein XCV4246 SM01266 XCV4246 XCV4251 SM00155 Phospholipase D. Active site motifs. XCV4276 SM00421 helix_turn_helix, Lux Regulon XCV4276 SM00448 cheY-homologous receiver domain XCV4287 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCV4290 SM00346 helix_turn_helix isocitrate lyase regulation XCV4292 SM00091 PAS domain XCV4292 SM00387 Histidine kinase-like ATPases XCV4292 SM00388 His Kinase A (phosphoacceptor) domain XCV4292 SM00448 cheY-homologous receiver domain XCV4300 SM00564 beta-propeller repeat XCV4310 SM00836 DALR anticodon binding domain XCV4312 SM00382 ATPases associated with a variety of cellular activities XCV4332 SM00354 helix_turn _helix lactose operon repressor XCV4335 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCV4337 SM00758 XCV4337 XCV4337 SM01217 XCV4337 XCV4343 SM00612 XCV4343 XCV4349 SM01007 Class II Aldolase and Adducin N-terminal domain XCV4355 SM00633 Glycosyl hydrolase family 10 XCV4358 SM00633 Glycosyl hydrolase family 10 XCV4360 SM00633 Glycosyl hydrolase family 10 XCV4370 SM00829 Enoylreductase XCV4371 SM00563 Phosphate acyltransferases XCV4373 SM00354 helix_turn _helix lactose operon repressor XCV4378 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XCV4386 SM00388 His Kinase A (phosphoacceptor) domain XCV4390 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCV4390 SM01232 XCV4390 XCV4392 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV4392 SM00091 PAS domain XCV4403 SM00347 helix_turn_helix multiple antibiotic resistance protein XCV4412 SM00155 Phospholipase D. Active site motifs. XCV4434 SM00822 XCV4434 XCV4439 SM00530 Helix-turn-helix XRE-family like proteins XCV4444 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XCV4444 SM00736 Dystroglycan-type cadherin-like domains. XCV4444 SM00869 Autotransporter beta-domain XCV4450 SM00382 ATPases associated with a variety of cellular activities XCV4460 SM00829 Enoylreductase XCV4470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCV4470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCV4470 SM00091 PAS domain XCV4470 SM00267 diguanylate cyclase XCV4482 SM00014 Acid phosphatase homologues XCV4484 SM00028 Tetratricopeptide repeats XCVb0016 SM00670 Large family of predicted nucleotide-binding domains XCVb0018 SM00857 Resolvase, N terminal domain XCVc0008 SM00857 Resolvase, N terminal domain XCVc0038 SM00670 Large family of predicted nucleotide-binding domains XCVc0040 SM00857 Resolvase, N terminal domain XCVd0002 SM00470 ParB-like nuclease domain XCVd0074 SM00382 ATPases associated with a variety of cellular activities XCVd0103 SM00857 Resolvase, N terminal domain XCVd0105 SM01301 XCVd0105 XCVd0109 SM00857 Resolvase, N terminal domain XCVd0111 SM00670 Large family of predicted nucleotide-binding domains XCVd0128 SM00411 bacterial (prokaryotic) histone like domain XCVd0141 SM00487 DEAD-like helicases superfamily XCVd0141 SM00490 helicase superfamily c-terminal domain XCVd0150 SM00052 Putative diguanylate phosphodiesterase XCVd0152 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCVd0152 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCVd0152 SM00493 XCVd0152 XCVd0164 SM00507 HNH nucleases