locus-tag class description AC028_00005 IPR035909 Methylesterase CheB, C-terminal AC028_00005 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AC028_00005 IPR001789 Signal transduction response regulator, receiver domain AC028_00005 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_00005 IPR011006 CheY-like superfamily AC028_00010 IPR026024 Chemotaxis protein methyltransferase CheR AC028_00010 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_00010 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_00010 IPR000780 MCP methyltransferase, CheR-type AC028_00010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_00010 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AC028_00015 IPR001789 Signal transduction response regulator, receiver domain AC028_00015 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_00015 IPR011006 CheY-like superfamily AC028_00015 IPR035909 Methylesterase CheB, C-terminal AC028_00015 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AC028_00020 IPR001736 Phospholipase D/Transphosphatidylase AC028_00020 IPR030871 Cardiolipin synthase C AC028_00020 IPR025202 Phospholipase D-like domain AC028_00025 IPR018497 Peptidase M13, C-terminal domain AC028_00025 IPR042089 Peptidase M13, domain 2 AC028_00025 IPR024079 Metallopeptidase, catalytic domain superfamily AC028_00025 IPR000718 Peptidase M13 AC028_00025 IPR008753 Peptidase M13, N-terminal domain AC028_00035 IPR005952 Phosphoglycerate mutase 1 AC028_00035 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_00035 IPR029033 Histidine phosphatase superfamily AC028_00035 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AC028_00040 IPR007581 Endonuclease V AC028_00050 IPR011051 RmlC-like cupin domain superfamily AC028_00050 IPR014710 RmlC-like jelly roll fold AC028_00050 IPR012093 Pirin AC028_00050 IPR008778 Pirin, C-terminal domain AC028_00050 IPR003829 Pirin, N-terminal domain AC028_00065 IPR003829 Pirin, N-terminal domain AC028_00065 IPR014710 RmlC-like jelly roll fold AC028_00065 IPR011051 RmlC-like cupin domain superfamily AC028_00065 IPR012093 Pirin AC028_00065 IPR008778 Pirin, C-terminal domain AC028_00070 IPR003706 CstA, N-terminal domain AC028_00070 IPR025299 CstA, C-terminal domain AC028_00075 IPR007423 Selenoprotein, putative AC028_00090 IPR020683 Ankyrin repeat-containing domain AC028_00090 IPR002110 Ankyrin repeat AC028_00090 IPR036770 Ankyrin repeat-containing domain superfamily AC028_00095 IPR029058 Alpha/Beta hydrolase fold AC028_00125 IPR003777 XdhC- CoxI AC028_00125 IPR027051 XdhC Rossmann domain AC028_00130 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AC028_00130 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_00130 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AC028_00130 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AC028_00135 IPR016166 FAD-binding domain, PCMH-type AC028_00135 IPR036318 FAD-binding, type PCMH-like superfamily AC028_00135 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AC028_00135 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_00135 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_00135 IPR002346 Molybdopterin dehydrogenase, FAD-binding AC028_00140 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_00140 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AC028_00140 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_00140 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_00140 IPR036884 [2Fe-2S]-binding domain superfamily AC028_00140 IPR002888 [2Fe-2S]-binding AC028_00140 IPR012675 Beta-grasp domain superfamily AC028_00140 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_00145 IPR036736 ACP-like superfamily AC028_00145 IPR014043 Acyl transferase AC028_00145 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_00145 IPR013149 Alcohol dehydrogenase, C-terminal AC028_00145 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AC028_00145 IPR011032 GroES-like superfamily AC028_00145 IPR013154 Alcohol dehydrogenase, N-terminal AC028_00145 IPR020807 Polyketide synthase, dehydratase domain AC028_00145 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_00145 IPR032821 Ketoacyl-synthetase, C-terminal extension AC028_00145 IPR042104 Polyketide synthase, dehydratase domain superfamily AC028_00145 IPR009081 Phosphopantetheine binding ACP domain AC028_00145 IPR013968 Polyketide synthase, ketoreductase domain AC028_00145 IPR036291 NAD(P)-binding domain superfamily AC028_00145 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AC028_00145 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_00145 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_00145 IPR018201 Beta-ketoacyl synthase, active site AC028_00145 IPR016039 Thiolase-like AC028_00145 IPR020843 Polyketide synthase, enoylreductase domain AC028_00150 IPR001633 EAL domain AC028_00150 IPR035919 EAL domain superfamily AC028_00150 IPR000160 GGDEF domain AC028_00150 IPR029016 GAF-like domain superfamily AC028_00150 IPR029787 Nucleotide cyclase AC028_00150 IPR016132 Phytochrome chromophore attachment domain AC028_00150 IPR001294 Phytochrome AC028_00150 IPR003018 GAF domain AC028_00150 IPR013515 Phytochrome, central region AC028_00155 IPR011344 Single-stranded DNA-binding protein AC028_00155 IPR000424 Primosome PriB/single-strand DNA-binding AC028_00155 IPR012340 Nucleic acid-binding, OB-fold AC028_00160 IPR033749 Polyprenyl synthetase, conserved site AC028_00160 IPR000092 Polyprenyl synthetase AC028_00160 IPR008949 Isoprenoid synthase domain superfamily AC028_00170 IPR036615 Mur ligase, C-terminal domain superfamily AC028_00170 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AC028_00170 IPR004101 Mur ligase, C-terminal AC028_00170 IPR036565 Mur-like, catalytic domain superfamily AC028_00170 IPR018109 Folylpolyglutamate synthetase, conserved site AC028_00170 IPR013221 Mur ligase, central AC028_00185 IPR018042 Aspartate kinase, conserved site AC028_00185 IPR001341 Aspartate kinase AC028_00185 IPR001048 Aspartate/glutamate/uridylate kinase AC028_00185 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain AC028_00185 IPR002912 ACT domain AC028_00185 IPR036393 Acetylglutamate kinase-like superfamily AC028_00185 IPR005260 Aspartate kinase, monofunctional class AC028_00190 IPR003719 Phenazine biosynthesis PhzF protein AC028_00195 IPR003719 Phenazine biosynthesis PhzF protein AC028_00205 IPR015946 K homology domain-like, alpha/beta AC028_00205 IPR019904 Peroxiredoxin OsmC AC028_00205 IPR036102 OsmC/Ohr superfamily AC028_00205 IPR003718 OsmC/Ohr family AC028_00210 IPR002082 Aspartate carbamoyltransferase AC028_00210 IPR006130 Aspartate/ornithine carbamoyltransferase AC028_00210 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AC028_00210 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AC028_00210 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AC028_00215 IPR037027 YqgF/RNase H-like domain superfamily AC028_00215 IPR012337 Ribonuclease H-like superfamily AC028_00215 IPR005227 Putative pre-16S rRNA nuclease AC028_00215 IPR006641 YqgF/RNase H-like domain AC028_00220 IPR003774 Protein of unknown function UPF0301 AC028_00230 IPR000182 GNAT domain AC028_00230 IPR029062 Class I glutamine amidotransferase-like AC028_00230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_00230 IPR005019 Methyladenine glycosylase AC028_00230 IPR011257 DNA glycosylase AC028_00230 IPR017926 Glutamine amidotransferase AC028_00230 IPR016181 Acyl-CoA N-acyltransferase AC028_00230 IPR001674 GMP synthase, C-terminal AC028_00230 IPR025777 GMP synthetase ATP pyrophosphatase domain AC028_00245 IPR003593 AAA+ ATPase domain AC028_00245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00245 IPR006321 Pilus retraction protein PilT AC028_00245 IPR001482 Type II/IV secretion system protein AC028_00250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00250 IPR006321 Pilus retraction protein PilT AC028_00250 IPR001482 Type II/IV secretion system protein AC028_00250 IPR003593 AAA+ ATPase domain AC028_00255 IPR011078 Pyridoxal phosphate homeostasis protein AC028_00255 IPR001608 Alanine racemase, N-terminal AC028_00255 IPR029066 PLP-binding barrel AC028_00260 IPR000304 Pyrroline-5-carboxylate reductase AC028_00260 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AC028_00260 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AC028_00260 IPR036291 NAD(P)-binding domain superfamily AC028_00260 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_00270 IPR011055 Duplicated hybrid motif AC028_00270 IPR016047 Peptidase M23 AC028_00290 IPR006286 Deglycase PfpI AC028_00290 IPR029062 Class I glutamine amidotransferase-like AC028_00290 IPR002818 DJ-1/PfpI AC028_00300 IPR000944 Transcription regulator Rrf2-type AC028_00300 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_00300 IPR036390 Winged helix DNA-binding domain superfamily AC028_00300 IPR030489 Transcription regulator Rrf2-type, conserved site AC028_00305 IPR010231 SUF system FeS cluster assembly, SufB AC028_00305 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AC028_00305 IPR000825 SUF system FeS cluster assembly, SufBD AC028_00310 IPR003593 AAA+ ATPase domain AC028_00310 IPR010230 FeS cluster assembly SUF system, ATPase SufC AC028_00310 IPR003439 ABC transporter-like AC028_00310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00310 IPR017871 ABC transporter, conserved site AC028_00315 IPR000825 SUF system FeS cluster assembly, SufBD AC028_00315 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AC028_00315 IPR011542 SUF system FeS cluster assembly, SufD AC028_00320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_00320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_00320 IPR000192 Aminotransferase class V domain AC028_00320 IPR016454 Cysteine desulfurase AC028_00320 IPR010970 Cysteine desulfurase, SufS AC028_00320 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AC028_00320 IPR015424 Pyridoxal phosphate-dependent transferase AC028_00330 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AC028_00330 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AC028_00335 IPR010916 TonB box, conserved site AC028_00335 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_00335 IPR039423 TonB-dependent receptor-like AC028_00335 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_00335 IPR012910 TonB-dependent receptor, plug domain AC028_00335 IPR010105 TonB-dependent siderophore receptor AC028_00335 IPR030148 Catecholate siderophore receptor Fiu AC028_00335 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_00340 IPR005123 Oxoglutarate/iron-dependent dioxygenase AC028_00340 IPR023550 PKHD-type hydroxylase AC028_00340 IPR041097 PKHD-type hydroxylase C-terminal domain AC028_00340 IPR006620 Prolyl 4-hydroxylase, alpha subunit AC028_00365 IPR024932 Flavin transferase ApbE AC028_00365 IPR042159 Flavin-trafficking protein ApbE AC028_00365 IPR003374 ApbE-like superfamily AC028_00370 IPR008254 Flavodoxin/nitric oxide synthase AC028_00370 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AC028_00370 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AC028_00370 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_00370 IPR001094 Flavodoxin-like AC028_00370 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AC028_00370 IPR017938 Riboflavin synthase-like beta-barrel AC028_00370 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_00370 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AC028_00370 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_00370 IPR029039 Flavoprotein-like superfamily AC028_00370 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_00380 IPR010994 RuvA domain 2-like AC028_00380 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AC028_00395 IPR011009 Protein kinase-like domain superfamily AC028_00395 IPR002575 Aminoglycoside phosphotransferase AC028_00400 IPR005835 Nucleotidyl transferase domain AC028_00400 IPR029044 Nucleotide-diphospho-sugar transferases AC028_00405 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00405 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AC028_00405 IPR013317 Chromosomal replication initiator protein DnaA AC028_00405 IPR017788 DnaA regulatory inactivator Hda AC028_00410 IPR002549 Transmembrane protein TqsA-like AC028_00420 IPR016188 PurM-like, N-terminal domain AC028_00420 IPR036676 PurM-like, C-terminal domain superfamily AC028_00420 IPR036921 PurM-like, N-terminal domain superfamily AC028_00420 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AC028_00420 IPR010918 PurM-like, C-terminal domain AC028_00430 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AC028_00430 IPR036477 Formyl transferase, N-terminal domain superfamily AC028_00430 IPR002376 Formyl transferase, N-terminal AC028_00430 IPR004607 Phosphoribosylglycinamide formyltransferase AC028_00450 IPR001986 Enolpyruvate transferase domain AC028_00450 IPR036968 Enolpyruvate transferase domain superfamily AC028_00450 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AC028_00450 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AC028_00455 IPR002634 BolA protein AC028_00455 IPR036065 BolA-like superfamily AC028_00460 IPR000644 CBS domain AC028_00460 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AC028_00460 IPR001347 Sugar isomerase (SIS) AC028_00460 IPR035474 KpsF-like, SIS domain AC028_00465 IPR010023 KdsC family AC028_00465 IPR023214 HAD superfamily AC028_00465 IPR036412 HAD-like superfamily AC028_00475 IPR005653 Organic solvent tolerance-like, N-terminal AC028_00475 IPR014340 Lipopolysaccharide export system protein LptA AC028_00480 IPR017871 ABC transporter, conserved site AC028_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00480 IPR003593 AAA+ ATPase domain AC028_00480 IPR003439 ABC transporter-like AC028_00480 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AC028_00485 IPR007046 RNA polymerase sigma factor 54, core-binding domain AC028_00485 IPR000394 RNA polymerase sigma factor 54 AC028_00485 IPR007634 RNA polymerase sigma factor 54, DNA-binding AC028_00485 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AC028_00490 IPR003489 Ribosome hibernation promoting factor/RaiA AC028_00490 IPR036567 Ribosome hibernation promotion factor-like AC028_00495 IPR016152 Phosphotransferase/anion transporter AC028_00495 IPR002178 PTS EIIA type-2 domain AC028_00495 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN AC028_00500 IPR003755 HPr(Ser) kinase/phosphorylase AC028_00500 IPR011104 HPr kinase/phosphorylase, C-terminal AC028_00500 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal AC028_00500 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AC028_00505 IPR005337 RapZ-like family AC028_00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00515 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AC028_00515 IPR000032 Phosphocarrier protein HPr-like AC028_00515 IPR035895 HPr-like superfamily AC028_00515 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AC028_00520 IPR023151 PEP-utilising enzyme, conserved site AC028_00520 IPR008279 PEP-utilising enzyme, mobile domain AC028_00520 IPR036637 Phosphohistidine domain superfamily AC028_00520 IPR040442 Pyruvate kinase-like domain superfamily AC028_00520 IPR008731 Phosphotransferase system, enzyme I N-terminal AC028_00520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_00520 IPR006318 Phosphotransferase system, enzyme I-like AC028_00520 IPR000121 PEP-utilising enzyme, C-terminal AC028_00520 IPR018274 PEP-utilising enzyme, active site AC028_00520 IPR036618 PtsI, HPr-binding domain superfamily AC028_00520 IPR024692 Phosphotransferase system, enzyme I AC028_00525 IPR006669 Magnesium transporter MgtE AC028_00525 IPR038076 MgtE, N-terminal domain superfamily AC028_00525 IPR038048 Magnesium transporter MgtE, transmembrane domain AC028_00525 IPR000644 CBS domain AC028_00525 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AC028_00525 IPR006667 SLC41 divalent cation transporters, integral membrane domain AC028_00525 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_00530 IPR029058 Alpha/Beta hydrolase fold AC028_00530 IPR000801 Putative esterase AC028_00535 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AC028_00540 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AC028_00550 IPR004840 Amino acid permease, conserved site AC028_00550 IPR004841 Amino acid permease/ SLC12A domain AC028_00555 IPR012334 Pectin lyase fold AC028_00555 IPR011050 Pectin lyase fold/virulence factor AC028_00555 IPR002022 Pectate lyase AC028_00560 IPR002410 Peptidase S33 AC028_00560 IPR005945 Proline-specific peptidase AC028_00560 IPR000073 Alpha/beta hydrolase fold-1 AC028_00560 IPR029058 Alpha/Beta hydrolase fold AC028_00570 IPR000792 Transcription regulator LuxR, C-terminal AC028_00570 IPR011006 CheY-like superfamily AC028_00570 IPR016032 Signal transduction response regulator, C-terminal effector AC028_00575 IPR004841 Amino acid permease/ SLC12A domain AC028_00610 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_00610 IPR001279 Metallo-beta-lactamase AC028_00615 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_00615 IPR006905 Flavin-dependent halogenase AC028_00615 IPR033856 Flavin-dependent tryptophan halogenase AC028_00645 IPR000551 MerR-type HTH domain AC028_00645 IPR015358 Transcription regulator MerR, DNA binding AC028_00645 IPR009061 Putative DNA-binding domain superfamily AC028_00645 IPR010211 Redox-sensitive transcriptional activator SoxR AC028_00650 IPR004638 Drug resistance transporter EmrB-like AC028_00650 IPR011701 Major facilitator superfamily AC028_00650 IPR020846 Major facilitator superfamily domain AC028_00650 IPR036259 MFS transporter superfamily AC028_00660 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AC028_00660 IPR016185 Pre-ATP-grasp domain superfamily AC028_00685 IPR007157 PspA/IM30 AC028_00695 IPR000659 Pyridoxamine 5'-phosphate oxidase AC028_00695 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AC028_00695 IPR012349 FMN-binding split barrel AC028_00695 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AC028_00695 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AC028_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00700 IPR031322 Shikimate kinase/gluconokinase AC028_00700 IPR000623 Shikimate kinase/Threonine synthase-like 1 AC028_00700 IPR023000 Shikimate kinase, conserved site AC028_00705 IPR030960 3-dehydroquinate synthase domain AC028_00705 IPR030963 3-dehydroquinate synthase family AC028_00705 IPR016037 3-dehydroquinate synthase AroB AC028_00715 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AC028_00715 IPR006361 Uroporphyrinogen decarboxylase HemE AC028_00715 IPR038071 UROD/MetE-like superfamily AC028_00720 IPR036259 MFS transporter superfamily AC028_00720 IPR023721 Multidrug resistance protein MdtD AC028_00720 IPR004638 Drug resistance transporter EmrB-like AC028_00720 IPR020846 Major facilitator superfamily domain AC028_00720 IPR011701 Major facilitator superfamily AC028_00725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_00725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_00725 IPR005467 Histidine kinase domain AC028_00725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_00725 IPR011006 CheY-like superfamily AC028_00725 IPR036641 HPT domain superfamily AC028_00725 IPR003594 Histidine kinase/HSP90-like ATPase AC028_00725 IPR033414 Periplasmic sensor domain AC028_00725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_00725 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_00725 IPR001789 Signal transduction response regulator, receiver domain AC028_00725 IPR003660 HAMP domain AC028_00735 IPR001584 Integrase, catalytic core AC028_00735 IPR025948 HTH-like domain AC028_00735 IPR036397 Ribonuclease H superfamily AC028_00735 IPR012337 Ribonuclease H-like superfamily AC028_00740 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_00740 IPR002514 Transposase IS3/IS911family AC028_00740 IPR009057 Homeobox-like domain superfamily AC028_00755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_00755 IPR036641 HPT domain superfamily AC028_00755 IPR005467 Histidine kinase domain AC028_00755 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_00755 IPR001789 Signal transduction response regulator, receiver domain AC028_00755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_00755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_00755 IPR003594 Histidine kinase/HSP90-like ATPase AC028_00755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_00755 IPR011006 CheY-like superfamily AC028_00760 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AC028_00760 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_00760 IPR023480 Uncharacterised protein family UPF0312/YceI AC028_00780 IPR029009 Allosteric substrate binding domain superfamily AC028_00780 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AC028_00780 IPR005131 Serine dehydratase beta chain AC028_00780 IPR005130 Serine dehydratase-like, alpha subunit AC028_00785 IPR000639 Epoxide hydrolase-like AC028_00785 IPR029058 Alpha/Beta hydrolase fold AC028_00785 IPR000073 Alpha/beta hydrolase fold-1 AC028_00785 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD AC028_00795 IPR001342 Homoserine dehydrogenase, catalytic AC028_00795 IPR036393 Acetylglutamate kinase-like superfamily AC028_00795 IPR019811 Homoserine dehydrogenase, conserved site AC028_00795 IPR036291 NAD(P)-binding domain superfamily AC028_00795 IPR018042 Aspartate kinase, conserved site AC028_00795 IPR001341 Aspartate kinase AC028_00795 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AC028_00795 IPR001048 Aspartate/glutamate/uridylate kinase AC028_00795 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AC028_00795 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain AC028_00800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_00800 IPR015424 Pyridoxal phosphate-dependent transferase AC028_00800 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_00800 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AC028_00800 IPR011821 O-succinylhomoserine (thiol)-lyase AC028_00805 IPR029058 Alpha/Beta hydrolase fold AC028_00805 IPR008220 Homoserine/serine acetyltransferase MetX-like AC028_00805 IPR000073 Alpha/beta hydrolase fold-1 AC028_00810 IPR013731 Opacity-associated protein A, N-terminal AC028_00810 IPR018392 LysM domain AC028_00810 IPR016047 Peptidase M23 AC028_00810 IPR011055 Duplicated hybrid motif AC028_00815 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AC028_00815 IPR032090 Peptide chain release factor 3, C-terminal AC028_00815 IPR004548 Peptide chain release factor 3 AC028_00815 IPR041732 Peptide chain release factor 3, GTP-binding domain AC028_00815 IPR005225 Small GTP-binding protein domain AC028_00815 IPR000795 Transcription factor, GTP-binding domain AC028_00815 IPR031157 Tr-type G domain, conserved site AC028_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_00815 IPR009000 Translation protein, beta-barrel domain superfamily AC028_00815 IPR035647 EF-G domain III/V-like AC028_00820 IPR004254 AdipoR/Haemolysin-III-related AC028_00820 IPR005744 Hly-III AC028_00825 IPR007844 AsmA AC028_00830 IPR000644 CBS domain AC028_00830 IPR013785 Aldolase-type TIM barrel AC028_00830 IPR005990 Inosine-5'-monophosphate dehydrogenase AC028_00830 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AC028_00830 IPR001093 IMP dehydrogenase/GMP reductase AC028_00835 IPR029044 Nucleotide-diphospho-sugar transferases AC028_00835 IPR001173 Glycosyltransferase 2-like AC028_00840 IPR001264 Glycosyl transferase, family 51 AC028_00840 IPR036950 Penicillin binding protein transglycosylase domain AC028_00840 IPR011812 Biosynthetic peptidoglycan transglycosylase AC028_00840 IPR023346 Lysozyme-like domain superfamily AC028_00845 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AC028_00845 IPR016153 Heat shock protein Hsp33, N-terminal AC028_00845 IPR016154 Heat shock protein Hsp33, C-terminal AC028_00845 IPR000397 Heat shock protein Hsp33 AC028_00855 IPR012910 TonB-dependent receptor, plug domain AC028_00855 IPR010916 TonB box, conserved site AC028_00855 IPR039426 Vitamin B12 transporter BtuB-like AC028_00855 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_00855 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_00855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_00855 IPR010917 TonB-dependent receptor, conserved site AC028_00860 IPR001647 DNA-binding HTH domain, TetR-type AC028_00860 IPR009057 Homeobox-like domain superfamily AC028_00860 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_00865 IPR000639 Epoxide hydrolase-like AC028_00865 IPR000073 Alpha/beta hydrolase fold-1 AC028_00865 IPR029058 Alpha/Beta hydrolase fold AC028_00870 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AC028_00870 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_00870 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_00870 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_00870 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_00870 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_00900 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AC028_00900 IPR011053 Single hybrid motif AC028_00900 IPR033753 Glycine cleavage system H-protein/Simiate AC028_00900 IPR002930 Glycine cleavage system H-protein AC028_00900 IPR000089 Biotin/lipoyl attachment AC028_00900 IPR017453 Glycine cleavage system H-protein, subgroup AC028_00905 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AC028_00905 IPR006222 Aminomethyltransferase, folate-binding domain AC028_00905 IPR006223 Glycine cleavage system T protein AC028_00905 IPR022903 Glycine cleavage system T protein, bacteria AC028_00905 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AC028_00905 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AC028_00905 IPR028896 Aminomethyltransferase-like AC028_00915 IPR003844 Uncharacterised protein family UPF0060 AC028_00920 IPR011551 NTP pyrophosphohydrolase MazG AC028_00920 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AC028_00925 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ AC028_00925 IPR020583 Inositol monophosphatase, metal-binding site AC028_00925 IPR000760 Inositol monophosphatase-like AC028_00925 IPR020550 Inositol monophosphatase, conserved site AC028_00930 IPR000086 NUDIX hydrolase domain AC028_00930 IPR020084 NUDIX hydrolase, conserved site AC028_00930 IPR015797 NUDIX hydrolase-like domain superfamily AC028_00935 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AC028_00935 IPR005814 Aminotransferase class-III AC028_00935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_00935 IPR015424 Pyridoxal phosphate-dependent transferase AC028_00935 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_00940 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_00940 IPR006700 Ribosomal RNA small subunit methyltransferase E AC028_00940 IPR015947 PUA-like superfamily AC028_00940 IPR029028 Alpha/beta knot methyltransferases AC028_00945 IPR003836 Glucokinase AC028_00960 IPR011583 Chitinase II AC028_00960 IPR001223 Glycoside hydrolase family 18, catalytic domain AC028_00960 IPR017853 Glycoside hydrolase superfamily AC028_00960 IPR018392 LysM domain AC028_00960 IPR036779 LysM domain superfamily AC028_00960 IPR041704 CFLE, GH18 catalytic domain AC028_00960 IPR029070 Chitinase insertion domain superfamily AC028_00965 IPR011658 PA14 domain AC028_00965 IPR037524 PA14/GLEYA domain AC028_00965 IPR025705 Beta-hexosaminidase AC028_00965 IPR029018 Beta-hexosaminidase-like, domain 2 AC028_00965 IPR017853 Glycoside hydrolase superfamily AC028_00965 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AC028_00965 IPR015883 Glycoside hydrolase family 20, catalytic domain AC028_00975 IPR026891 Fibronectin type III-like domain AC028_00975 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AC028_00975 IPR001764 Glycoside hydrolase, family 3, N-terminal AC028_00975 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AC028_00975 IPR017853 Glycoside hydrolase superfamily AC028_00975 IPR013783 Immunoglobulin-like fold AC028_00975 IPR037524 PA14/GLEYA domain AC028_00975 IPR011658 PA14 domain AC028_00975 IPR002772 Glycoside hydrolase family 3 C-terminal domain AC028_00995 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AC028_00995 IPR036291 NAD(P)-binding domain superfamily AC028_00995 IPR001088 Glycoside hydrolase, family 4 AC028_00995 IPR022616 Glycosyl hydrolase, family 4, C-terminal AC028_00995 IPR019802 Glycoside hydrolase, family 4, conserved site AC028_01005 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_01005 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AC028_01005 IPR012939 Glycosyl hydrolase family 92 AC028_01005 IPR008928 Six-hairpin glycosidase superfamily AC028_01005 IPR005887 Alpha-1,2-mannosidase, putative AC028_01010 IPR031330 Glycoside hydrolase 35, catalytic domain AC028_01010 IPR026283 Beta-galactosidase 1-like AC028_01010 IPR008979 Galactose-binding-like domain superfamily AC028_01010 IPR019801 Glycoside hydrolase, family 35, conserved site AC028_01010 IPR001944 Glycoside hydrolase, family 35 AC028_01010 IPR017853 Glycoside hydrolase superfamily AC028_01040 IPR005627 Copper homeostasis protein CutC AC028_01040 IPR036822 Copper homeostasis (CutC) domain superfamily AC028_01040 IPR023648 Copper homeostasis CutC domain AC028_01045 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_01045 IPR000246 Peptidase T2, asparaginase 2 AC028_01045 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_01060 IPR016181 Acyl-CoA N-acyltransferase AC028_01060 IPR000182 GNAT domain AC028_01075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_01075 IPR001789 Signal transduction response regulator, receiver domain AC028_01075 IPR036641 HPT domain superfamily AC028_01075 IPR005467 Histidine kinase domain AC028_01075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_01075 IPR003594 Histidine kinase/HSP90-like ATPase AC028_01075 IPR011006 CheY-like superfamily AC028_01075 IPR002545 CheW-like domain AC028_01075 IPR036061 CheW-like domain superfamily AC028_01075 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_01080 IPR029095 NarX-like, N-terminal AC028_01080 IPR004090 Chemotaxis methyl-accepting receptor AC028_01080 IPR003660 HAMP domain AC028_01080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_01085 IPR039315 Chemotaxis protein CheW AC028_01085 IPR036061 CheW-like domain superfamily AC028_01085 IPR002545 CheW-like domain AC028_01090 IPR011006 CheY-like superfamily AC028_01090 IPR001789 Signal transduction response regulator, receiver domain AC028_01095 IPR011006 CheY-like superfamily AC028_01095 IPR001789 Signal transduction response regulator, receiver domain AC028_01100 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AC028_01100 IPR013815 ATP-grasp fold, subdomain 1 AC028_01100 IPR011761 ATP-grasp fold AC028_01100 IPR004215 Prokaryotic glutathione synthetase, N-terminal AC028_01100 IPR016185 Pre-ATP-grasp domain superfamily AC028_01100 IPR006284 Glutathione synthetase, prokaryotic AC028_01115 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AC028_01115 IPR000905 Gcp-like domain AC028_01120 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AC028_01120 IPR006935 Helicase/UvrB, N-terminal AC028_01120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01120 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_01120 IPR006555 ATP-dependent helicase, C-terminal AC028_01130 IPR023346 Lysozyme-like domain superfamily AC028_01130 IPR011813 Penicillin-binding protein 1B AC028_01130 IPR036950 Penicillin binding protein transglycosylase domain AC028_01130 IPR001264 Glycosyl transferase, family 51 AC028_01130 IPR001460 Penicillin-binding protein, transpeptidase AC028_01130 IPR028166 Bifunctional transglycosylase second domain AC028_01130 IPR012338 Beta-lactamase/transpeptidase-like AC028_01135 IPR029044 Nucleotide-diphospho-sugar transferases AC028_01135 IPR001173 Glycosyltransferase 2-like AC028_01135 IPR002495 Glycosyl transferase, family 8 AC028_01145 IPR007685 RelA/SpoT AC028_01145 IPR002912 ACT domain AC028_01145 IPR004095 TGS AC028_01145 IPR012676 TGS-like AC028_01145 IPR033655 RelA, TGS domain AC028_01145 IPR003607 HD/PDEase domain AC028_01145 IPR012675 Beta-grasp domain superfamily AC028_01145 IPR004811 RelA/SpoT family AC028_01150 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_01150 IPR011842 Coenzyme PQQ biosynthesis protein B AC028_01150 IPR001279 Metallo-beta-lactamase AC028_01155 IPR016084 Haem oxygenase-like, multi-helical AC028_01155 IPR011845 Coenzyme PQQ biosynthesis protein C AC028_01155 IPR039068 Pyrroloquinoline-quinone synthase-like AC028_01155 IPR004305 Thiaminase-2/PQQC AC028_01160 IPR008792 Coenzyme PQQ synthesis protein D AC028_01160 IPR022479 Coenzyme PQQ synthesis D, bacteria AC028_01160 IPR041881 Coenzyme PQQ synthesis protein D superfamily AC028_01165 IPR017200 Coenzyme PQQ synthesis protein E AC028_01165 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AC028_01165 IPR013785 Aldolase-type TIM barrel AC028_01165 IPR007197 Radical SAM AC028_01165 IPR023885 4Fe4S-binding SPASM domain AC028_01180 IPR003836 Glucokinase AC028_01190 IPR001650 Helicase, C-terminal AC028_01190 IPR010222 RNA helicase HrpA AC028_01190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01190 IPR024590 RNA helicase HrpA, C-terminal AC028_01190 IPR003593 AAA+ ATPase domain AC028_01190 IPR011545 DEAD/DEAH box helicase domain AC028_01190 IPR011709 Domain of unknown function DUF1605 AC028_01190 IPR007502 Helicase-associated domain AC028_01190 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_01195 IPR008331 Ferritin/DPS protein domain AC028_01195 IPR023188 DNA-binding protein Dps, conserved site AC028_01195 IPR012347 Ferritin-like AC028_01195 IPR009078 Ferritin-like superfamily AC028_01195 IPR002177 DNA-binding protein Dps AC028_01200 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AC028_01200 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_01200 IPR001650 Helicase, C-terminal AC028_01200 IPR004589 DNA helicase, ATP-dependent, RecQ type AC028_01200 IPR011545 DEAD/DEAH box helicase domain AC028_01200 IPR002121 HRDC domain AC028_01200 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_01200 IPR018982 RQC domain AC028_01200 IPR010997 HRDC-like superfamily AC028_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01200 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AC028_01235 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_01235 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_01235 IPR003660 HAMP domain AC028_01235 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_01235 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_01235 IPR004090 Chemotaxis methyl-accepting receptor AC028_01255 IPR003594 Histidine kinase/HSP90-like ATPase AC028_01255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_01255 IPR035965 PAS domain superfamily AC028_01255 IPR000700 PAS-associated, C-terminal AC028_01255 IPR011102 Signal transduction histidine kinase, HWE region AC028_01255 IPR001610 PAC motif AC028_01255 IPR000014 PAS domain AC028_01260 IPR018317 Queuosine biosynthesis protein QueC AC028_01260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_01270 IPR024924 7-carboxy-7-deazaguanine synthase-like AC028_01270 IPR013785 Aldolase-type TIM barrel AC028_01270 IPR007197 Radical SAM AC028_01280 IPR039001 Peptidoglycan-associated lipoprotein AC028_01280 IPR006690 Outer membrane protein, OmpA-like, conserved site AC028_01280 IPR006664 Outer membrane protein, bacterial AC028_01280 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AC028_01280 IPR006665 OmpA-like domain AC028_01280 IPR036737 OmpA-like domain superfamily AC028_01285 IPR036752 TolB, N-terminal domain superfamily AC028_01285 IPR014167 Tol-Pal system protein TolB AC028_01285 IPR011659 WD40-like Beta Propeller AC028_01285 IPR011042 Six-bladed beta-propeller, TolB-like AC028_01285 IPR007195 TolB, N-terminal AC028_01295 IPR003400 Biopolymer transport protein ExbD/TolR AC028_01295 IPR014168 Tol-Pal system protein TolR AC028_01300 IPR014163 Tol-Pal system, TolQ AC028_01300 IPR002898 MotA/TolQ/ExbB proton channel AC028_01305 IPR029069 HotDog domain superfamily AC028_01305 IPR006683 Thioesterase domain AC028_01305 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase AC028_01305 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AC028_01305 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AC028_01310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01310 IPR004605 DNA helicase, Holliday junction RuvB-type AC028_01310 IPR041445 RuvB, AAA lid domain AC028_01310 IPR003593 AAA+ ATPase domain AC028_01310 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_01310 IPR036390 Winged helix DNA-binding domain superfamily AC028_01310 IPR008824 RuvB-like P-loop domain AC028_01310 IPR008823 RuvB C-terminal winged helix domain AC028_01315 IPR003855 Potassium transporter AC028_01315 IPR023051 Potassium uptake protein, low affinity, Kup AC028_01320 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AC028_01320 IPR012340 Nucleic acid-binding, OB-fold AC028_01320 IPR000085 Bacterial DNA recombination protein RuvA AC028_01320 IPR010994 RuvA domain 2-like AC028_01320 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AC028_01320 IPR036267 RuvA, C-terminal domain superfamily AC028_01320 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AC028_01325 IPR036397 Ribonuclease H superfamily AC028_01325 IPR002176 Crossover junction endodeoxyribonuclease RuvC AC028_01325 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AC028_01325 IPR012337 Ribonuclease H-like superfamily AC028_01330 IPR017856 Integrase-like, N-terminal AC028_01330 IPR002876 Transcriptional regulator TACO1-like AC028_01330 IPR026564 Transcriptional regulator TACO1-like, domain 3 AC028_01330 IPR029072 YebC-like AC028_01345 IPR012340 Nucleic acid-binding, OB-fold AC028_01345 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AC028_01345 IPR004115 GAD-like domain superfamily AC028_01345 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AC028_01345 IPR004524 Aspartate-tRNA ligase, type 1 AC028_01345 IPR029351 GAD domain AC028_01345 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_01345 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AC028_01360 IPR036259 MFS transporter superfamily AC028_01360 IPR020846 Major facilitator superfamily domain AC028_01360 IPR011701 Major facilitator superfamily AC028_01370 IPR007312 Phosphoesterase AC028_01370 IPR008475 Bacterial phospholipase C, C-terminal domain AC028_01370 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_01370 IPR017767 Bacterial phospholipase C, phosphocholine-specific AC028_01370 IPR017850 Alkaline-phosphatase-like, core domain superfamily AC028_01390 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_01390 IPR023650 Beta-lactamase, class-A active site AC028_01390 IPR012338 Beta-lactamase/transpeptidase-like AC028_01390 IPR000871 Beta-lactamase, class-A AC028_01395 IPR036390 Winged helix DNA-binding domain superfamily AC028_01395 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_01395 IPR000847 Transcription regulator HTH, LysR AC028_01395 IPR037420 HTH-type transcriptional activator AmpR, PBP2 AC028_01395 IPR005119 LysR, substrate-binding AC028_01405 IPR003593 AAA+ ATPase domain AC028_01405 IPR032781 ABC-transporter extension domain AC028_01405 IPR003439 ABC transporter-like AC028_01405 IPR017871 ABC transporter, conserved site AC028_01405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01410 IPR039426 Vitamin B12 transporter BtuB-like AC028_01410 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01410 IPR010105 TonB-dependent siderophore receptor AC028_01410 IPR010917 TonB-dependent receptor, conserved site AC028_01410 IPR012910 TonB-dependent receptor, plug domain AC028_01410 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01410 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01420 IPR010917 TonB-dependent receptor, conserved site AC028_01420 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01420 IPR010916 TonB box, conserved site AC028_01420 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01420 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01420 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_01420 IPR039426 Vitamin B12 transporter BtuB-like AC028_01420 IPR012910 TonB-dependent receptor, plug domain AC028_01425 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01425 IPR010105 TonB-dependent siderophore receptor AC028_01425 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01425 IPR012910 TonB-dependent receptor, plug domain AC028_01425 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01425 IPR039426 Vitamin B12 transporter BtuB-like AC028_01425 IPR010917 TonB-dependent receptor, conserved site AC028_01430 IPR001128 Cytochrome P450 AC028_01430 IPR036396 Cytochrome P450 superfamily AC028_01430 IPR017972 Cytochrome P450, conserved site AC028_01430 IPR002397 Cytochrome P450, B-class AC028_01435 IPR006153 Cation/H+ exchanger AC028_01435 IPR004771 K+/H+ exchanger AC028_01435 IPR038770 Sodium/solute symporter superfamily AC028_01435 IPR036291 NAD(P)-binding domain superfamily AC028_01435 IPR003148 Regulator of K+ conductance, N-terminal AC028_01445 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01445 IPR011662 Secretin/TonB, short N-terminal domain AC028_01445 IPR010917 TonB-dependent receptor, conserved site AC028_01445 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01445 IPR010916 TonB box, conserved site AC028_01445 IPR010105 TonB-dependent siderophore receptor AC028_01445 IPR012910 TonB-dependent receptor, plug domain AC028_01445 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01455 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal AC028_01455 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like AC028_01455 IPR022770 Ferric iron reductase FhuF domain AC028_01460 IPR036259 MFS transporter superfamily AC028_01460 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AC028_01460 IPR023692 Multidrug resistance protein MdtG AC028_01460 IPR020846 Major facilitator superfamily domain AC028_01460 IPR011701 Major facilitator superfamily AC028_01470 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AC028_01470 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AC028_01470 IPR022272 Lipocalin family conserved site AC028_01470 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AC028_01470 IPR000183 Ornithine/DAP/Arg decarboxylase AC028_01470 IPR002433 Ornithine decarboxylase AC028_01470 IPR029066 PLP-binding barrel AC028_01490 IPR009057 Homeobox-like domain superfamily AC028_01490 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_01490 IPR002514 Transposase IS3/IS911family AC028_01495 IPR001584 Integrase, catalytic core AC028_01495 IPR025948 HTH-like domain AC028_01495 IPR036397 Ribonuclease H superfamily AC028_01495 IPR012337 Ribonuclease H-like superfamily AC028_01505 IPR003805 Adenosylcobinamide-GDP ribazoletransferase AC028_01515 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AC028_01515 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily AC028_01515 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AC028_01515 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AC028_01520 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01520 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase AC028_01525 IPR029062 Class I glutamine amidotransferase-like AC028_01525 IPR004459 Cobyric acid synthase CobQ AC028_01525 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_01525 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 AC028_01525 IPR011698 CobB/CobQ-like glutamine amidotransferase AC028_01525 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01525 IPR017929 CobB/CobQ glutamine amidotransferase AC028_01530 IPR015424 Pyridoxal phosphate-dependent transferase AC028_01530 IPR005860 L-threonine-O-3-phosphate decarboxylase AC028_01530 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AC028_01530 IPR004839 Aminotransferase, class I/classII AC028_01530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_01530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_01535 IPR004485 Cobalamin biosynthesis CobD/CbiB AC028_01535 IPR031347 Protein AmpE AC028_01540 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR AC028_01540 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain AC028_01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01560 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01560 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01560 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01560 IPR012910 TonB-dependent receptor, plug domain AC028_01560 IPR039426 Vitamin B12 transporter BtuB-like AC028_01560 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_01570 IPR028299 ClpA/B, conserved site 2 AC028_01570 IPR004176 Clp, N-terminal AC028_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01570 IPR041546 ClpA/ClpB, AAA lid domain AC028_01570 IPR018368 ClpA/B, conserved site 1 AC028_01570 IPR001270 ClpA/B family AC028_01570 IPR036628 Clp, N-terminal domain superfamily AC028_01570 IPR003593 AAA+ ATPase domain AC028_01570 IPR003959 ATPase, AAA-type, core AC028_01570 IPR017730 Chaperonin ClpB AC028_01570 IPR019489 Clp ATPase, C-terminal AC028_01575 IPR017871 ABC transporter, conserved site AC028_01575 IPR003439 ABC transporter-like AC028_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01575 IPR003593 AAA+ ATPase domain AC028_01575 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AC028_01580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_01580 IPR035906 MetI-like superfamily AC028_01590 IPR023210 NADP-dependent oxidoreductase domain AC028_01590 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_01605 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01605 IPR010105 TonB-dependent siderophore receptor AC028_01605 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01605 IPR012910 TonB-dependent receptor, plug domain AC028_01605 IPR039426 Vitamin B12 transporter BtuB-like AC028_01610 IPR000305 GIY-YIG endonuclease AC028_01610 IPR035901 GIY-YIG endonuclease superfamily AC028_01645 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_01645 IPR010916 TonB box, conserved site AC028_01645 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_01645 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_01645 IPR010917 TonB-dependent receptor, conserved site AC028_01645 IPR012910 TonB-dependent receptor, plug domain AC028_01645 IPR039426 Vitamin B12 transporter BtuB-like AC028_01645 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_01650 IPR006379 HAD-superfamily hydrolase, subfamily IIB AC028_01650 IPR023214 HAD superfamily AC028_01650 IPR003337 Trehalose-phosphatase AC028_01650 IPR036412 HAD-like superfamily AC028_01655 IPR008928 Six-hairpin glycosidase superfamily AC028_01655 IPR011613 GH15-like domain AC028_01655 IPR012341 Six-hairpin glycosidase-like superfamily AC028_01660 IPR012766 Alpha,alpha-trehalose-phosphate synthase AC028_01660 IPR001830 Glycosyl transferase, family 20 AC028_01665 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_01665 IPR001479 Quinoprotein dehydrogenase, conserved site AC028_01665 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_01665 IPR017511 PQQ-dependent membrane bound dehydrogenase AC028_01665 IPR002372 Pyrrolo-quinoline quinone repeat AC028_01670 IPR004090 Chemotaxis methyl-accepting receptor AC028_01670 IPR003660 HAMP domain AC028_01670 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_01670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_01670 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_01670 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_01675 IPR007263 Protein of unknown function DUF393 AC028_01690 IPR036986 RNA-binding S4 domain superfamily AC028_01690 IPR002942 RNA-binding S4 domain AC028_01690 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_01690 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AC028_01690 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_01690 IPR006225 Pseudouridine synthase, RluC/RluD AC028_01695 IPR039565 Outer membrane lipoprotein BamD-like AC028_01695 IPR017689 Outer membrane protein assembly factor BamD AC028_01695 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_01705 IPR022310 NAD/GMP synthase AC028_01705 IPR036526 Carbon-nitrogen hydrolase superfamily AC028_01705 IPR003010 Carbon-nitrogen hydrolase AC028_01705 IPR014445 Glutamine-dependent NAD(+) synthetase AC028_01705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_01705 IPR003694 NAD(+) synthetase AC028_01705 IPR000132 Nitrilase/cyanide hydratase, conserved site AC028_01715 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AC028_01715 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AC028_01715 IPR003781 CoA-binding AC028_01715 IPR005810 Succinyl-CoA ligase, alpha subunit AC028_01715 IPR036291 NAD(P)-binding domain superfamily AC028_01715 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AC028_01715 IPR016102 Succinyl-CoA synthetase-like AC028_01720 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AC028_01720 IPR005809 Succinate--CoA synthetase, beta subunit AC028_01720 IPR011761 ATP-grasp fold AC028_01720 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AC028_01720 IPR013815 ATP-grasp fold, subdomain 1 AC028_01720 IPR016102 Succinyl-CoA synthetase-like AC028_01720 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AC028_01725 IPR003594 Histidine kinase/HSP90-like ATPase AC028_01725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_01725 IPR005467 Histidine kinase domain AC028_01725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_01725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_01725 IPR000014 PAS domain AC028_01725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_01730 IPR009057 Homeobox-like domain superfamily AC028_01730 IPR001789 Signal transduction response regulator, receiver domain AC028_01730 IPR003593 AAA+ ATPase domain AC028_01730 IPR002197 DNA binding HTH domain, Fis-type AC028_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01730 IPR011006 CheY-like superfamily AC028_01730 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_01730 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_01730 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_01730 IPR025944 Sigma-54 interaction domain, conserved site AC028_01735 IPR013374 ATPase, type IV, pilus assembly, PilB AC028_01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01735 IPR042181 Type II secretion system, protein E, N-terminal AC028_01735 IPR007831 General secretory system II, protein E, N-terminal AC028_01735 IPR037257 General secretory system II, protein E, N-terminal superfamily AC028_01735 IPR001482 Type II/IV secretion system protein AC028_01740 IPR012902 Prokaryotic N-terminal methylation site AC028_01740 IPR001082 Fimbrial protein pilin AC028_01750 IPR003004 GspF/PilC family AC028_01750 IPR018076 Type II secretion system F domain AC028_01750 IPR042094 Type II secretion system F domain superfamily AC028_01750 IPR001992 Type II secretion system conserved site AC028_01755 IPR000045 Prepilin type IV endopeptidase, peptidase domain AC028_01755 IPR014032 Peptidase A24A, prepilin type IV, bacterial AC028_01755 IPR010627 Peptidase A24A, N-terminal AC028_01760 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_01760 IPR001977 Dephospho-CoA kinase AC028_01765 IPR002559 Transposase, IS4-like AC028_01765 IPR008490 Transposase InsH, N-terminal AC028_01770 IPR025948 HTH-like domain AC028_01770 IPR001584 Integrase, catalytic core AC028_01770 IPR012337 Ribonuclease H-like superfamily AC028_01770 IPR036397 Ribonuclease H superfamily AC028_01775 IPR002514 Transposase IS3/IS911family AC028_01775 IPR009057 Homeobox-like domain superfamily AC028_01785 IPR035965 PAS domain superfamily AC028_01785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_01785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_01785 IPR005467 Histidine kinase domain AC028_01785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_01785 IPR003594 Histidine kinase/HSP90-like ATPase AC028_01785 IPR021766 Phosphate regulon sensor protein PhoR AC028_01785 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AC028_01785 IPR000014 PAS domain AC028_01785 IPR013767 PAS fold AC028_01785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_01790 IPR001789 Signal transduction response regulator, receiver domain AC028_01790 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_01790 IPR011006 CheY-like superfamily AC028_01790 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_01790 IPR039420 Transcriptional regulatory protein WalR-like AC028_01800 IPR013651 ATP-grasp fold, RimK-type AC028_01800 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AC028_01800 IPR013815 ATP-grasp fold, subdomain 1 AC028_01800 IPR041107 RimK, PreATP-grasp domain AC028_01800 IPR011761 ATP-grasp fold AC028_01800 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX AC028_01805 IPR013783 Immunoglobulin-like fold AC028_01805 IPR014756 Immunoglobulin E-set AC028_01805 IPR011837 Glycogen debranching enzyme, GlgX type AC028_01805 IPR013780 Glycosyl hydrolase, all-beta AC028_01805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_01805 IPR017853 Glycoside hydrolase superfamily AC028_01805 IPR004193 Glycoside hydrolase, family 13, N-terminal AC028_01840 IPR036397 Ribonuclease H superfamily AC028_01840 IPR012337 Ribonuclease H-like superfamily AC028_01840 IPR001584 Integrase, catalytic core AC028_01840 IPR025948 HTH-like domain AC028_01845 IPR009057 Homeobox-like domain superfamily AC028_01845 IPR002514 Transposase IS3/IS911family AC028_01860 IPR036514 SGNH hydrolase superfamily AC028_01860 IPR006315 Outer membrane autotransporter barrel AC028_01860 IPR005546 Autotransporter beta-domain AC028_01860 IPR008265 Lipase, GDSL, active site AC028_01860 IPR001087 GDSL lipase/esterase AC028_01860 IPR017186 Lipase, autotransporter EstA AC028_01860 IPR036709 Autotransporter beta-domain superfamily AC028_01870 IPR008867 Thiazole synthase AC028_01870 IPR013785 Aldolase-type TIM barrel AC028_01870 IPR033983 Thiazole synthase ThiG AC028_01875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_01875 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AC028_01880 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AC028_01880 IPR031312 Sodium/sulphate symporter, conserved site AC028_01880 IPR004680 Citrate transporter-like domain AC028_01880 IPR006037 Regulator of K+ conductance, C-terminal AC028_01900 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AC028_01900 IPR011234 Fumarylacetoacetase-like, C-terminal AC028_01905 IPR036019 Gated mechanosensitive channel AC028_01905 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AC028_01905 IPR001185 Large-conductance mechanosensitive channel AC028_01905 IPR019823 Large-conductance mechanosensitive channel, conserved site AC028_01920 IPR028082 Periplasmic binding protein-like I AC028_01920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_01920 IPR000843 LacI-type HTH domain AC028_01920 IPR023588 Transcription regulator HTH, PurR AC028_01930 IPR017853 Glycoside hydrolase superfamily AC028_01930 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AC028_01930 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AC028_01930 IPR008979 Galactose-binding-like domain superfamily AC028_01930 IPR028829 Exo-beta-D-glucosaminidase AC028_01930 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AC028_01930 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AC028_01930 IPR013783 Immunoglobulin-like fold AC028_01935 IPR017853 Glycoside hydrolase superfamily AC028_01935 IPR013780 Glycosyl hydrolase, all-beta AC028_01935 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AC028_01935 IPR019563 Glycosyl-hydrolase 97, catalytic domain AC028_01935 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain AC028_01935 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_01935 IPR013785 Aldolase-type TIM barrel AC028_01945 IPR019826 Carboxylesterase type B, active site AC028_01945 IPR000997 Cholinesterase AC028_01945 IPR002018 Carboxylesterase, type B AC028_01945 IPR019819 Carboxylesterase type B, conserved site AC028_01945 IPR029058 Alpha/Beta hydrolase fold AC028_01950 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AC028_01950 IPR029028 Alpha/beta knot methyltransferases AC028_01950 IPR004441 RNA methyltransferase TrmH family AC028_01950 IPR001537 tRNA/rRNA methyltransferase, SpoU type AC028_01950 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted AC028_01950 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_01950 IPR029064 50S ribosomal protein L30e-like AC028_01960 IPR024571 ERAP1-like C-terminal domain AC028_01960 IPR042097 Aminopeptidase N-like , N-terminal AC028_01960 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AC028_01960 IPR034016 Aminopeptidase N-type AC028_01960 IPR014782 Peptidase M1, membrane alanine aminopeptidase AC028_01985 IPR009057 Homeobox-like domain superfamily AC028_01985 IPR002514 Transposase IS3/IS911family AC028_01990 IPR025948 HTH-like domain AC028_01990 IPR001584 Integrase, catalytic core AC028_01990 IPR012337 Ribonuclease H-like superfamily AC028_01990 IPR036397 Ribonuclease H superfamily AC028_02005 IPR001584 Integrase, catalytic core AC028_02005 IPR012337 Ribonuclease H-like superfamily AC028_02005 IPR036397 Ribonuclease H superfamily AC028_02005 IPR025948 HTH-like domain AC028_02010 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02010 IPR009057 Homeobox-like domain superfamily AC028_02010 IPR002514 Transposase IS3/IS911family AC028_02020 IPR008490 Transposase InsH, N-terminal AC028_02020 IPR002559 Transposase, IS4-like AC028_02025 IPR001584 Integrase, catalytic core AC028_02025 IPR025948 HTH-like domain AC028_02025 IPR012337 Ribonuclease H-like superfamily AC028_02025 IPR036397 Ribonuclease H superfamily AC028_02030 IPR002514 Transposase IS3/IS911family AC028_02030 IPR009057 Homeobox-like domain superfamily AC028_02045 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_02045 IPR001036 Acriflavin resistance protein AC028_02050 IPR006143 RND efflux pump, membrane fusion protein AC028_02050 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_02055 IPR031157 Tr-type G domain, conserved site AC028_02055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_02055 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02055 IPR011779 Sulphate adenylyltransferase, large subunit AC028_02055 IPR000795 Transcription factor, GTP-binding domain AC028_02055 IPR009000 Translation protein, beta-barrel domain superfamily AC028_02055 IPR002891 Adenylyl-sulfate kinase AC028_02055 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AC028_02060 IPR002500 Phosphoadenosine phosphosulphate reductase AC028_02060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_02060 IPR011784 Sulphate adenylyltransferase, small subunit AC028_02065 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_02065 IPR029039 Flavoprotein-like superfamily AC028_02065 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AC028_02065 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_02065 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AC028_02065 IPR017938 Riboflavin synthase-like beta-barrel AC028_02065 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AC028_02065 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AC028_02065 IPR008254 Flavodoxin/nitric oxide synthase AC028_02065 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_02065 IPR001094 Flavodoxin-like AC028_02065 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_02070 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AC028_02070 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AC028_02070 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AC028_02070 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AC028_02070 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AC028_02075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_02075 IPR002500 Phosphoadenosine phosphosulphate reductase AC028_02075 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AC028_02075 IPR011800 Phosphoadenosine phosphosulphate reductase CysH AC028_02095 IPR036641 HPT domain superfamily AC028_02095 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_02095 IPR001789 Signal transduction response regulator, receiver domain AC028_02095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_02095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_02095 IPR005467 Histidine kinase domain AC028_02095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_02095 IPR003594 Histidine kinase/HSP90-like ATPase AC028_02095 IPR011006 CheY-like superfamily AC028_02095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_02105 IPR000847 Transcription regulator HTH, LysR AC028_02105 IPR005119 LysR, substrate-binding AC028_02105 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02105 IPR036390 Winged helix DNA-binding domain superfamily AC028_02110 IPR000878 Tetrapyrrole methylase AC028_02110 IPR035996 Tetrapyrrole methylase superfamily AC028_02110 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AC028_02110 IPR006367 Sirohaem synthase, N-terminal AC028_02110 IPR036291 NAD(P)-binding domain superfamily AC028_02110 IPR028281 Siroheme synthase, central domain AC028_02110 IPR006366 Uroporphyrin-III C-methyltransferase AC028_02110 IPR012409 Sirohaem synthase AC028_02110 IPR014777 Tetrapyrrole methylase, subdomain 1 AC028_02110 IPR014776 Tetrapyrrole methylase, subdomain 2 AC028_02110 IPR019478 Sirohaem synthase, dimerisation domain AC028_02115 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_02115 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AC028_02115 IPR005859 Cysteine synthase CysK AC028_02115 IPR005856 Cysteine synthase AC028_02115 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_02130 IPR013785 Aldolase-type TIM barrel AC028_02130 IPR000741 Fructose-bisphosphate aldolase, class-I AC028_02130 IPR029768 Fructose-bisphosphate aldolase class-I active site AC028_02135 IPR018209 Pyruvate kinase, active site AC028_02135 IPR011037 Pyruvate kinase-like, insert domain superfamily AC028_02135 IPR040442 Pyruvate kinase-like domain superfamily AC028_02135 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_02135 IPR001697 Pyruvate kinase AC028_02135 IPR015806 Pyruvate kinase, insert domain superfamily AC028_02135 IPR015793 Pyruvate kinase, barrel AC028_02135 IPR036918 Pyruvate kinase, C-terminal domain superfamily AC028_02135 IPR015795 Pyruvate kinase, C-terminal AC028_02145 IPR015824 Phosphoglycerate kinase, N-terminal AC028_02145 IPR015911 Phosphoglycerate kinase, conserved site AC028_02145 IPR001576 Phosphoglycerate kinase AC028_02145 IPR036043 Phosphoglycerate kinase superfamily AC028_02165 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AC028_02165 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AC028_02165 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AC028_02165 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AC028_02165 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AC028_02165 IPR036291 NAD(P)-binding domain superfamily AC028_02175 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AC028_02175 IPR005618 Outer membrane protein, OmpW AC028_02190 IPR005939 Beta-lactamase hydrolase-like AC028_02190 IPR001279 Metallo-beta-lactamase AC028_02190 IPR029021 Protein-tyrosine phosphatase-like AC028_02190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_02195 IPR005950 Molybdate ABC transporter, substrate-binding protein AC028_02200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_02200 IPR011867 Molybdate ABC transporter, permease protein AC028_02200 IPR035906 MetI-like superfamily AC028_02205 IPR003439 ABC transporter-like AC028_02205 IPR003593 AAA+ ATPase domain AC028_02205 IPR005116 Transport-associated OB, type 1 AC028_02205 IPR017871 ABC transporter, conserved site AC028_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02205 IPR004606 Molybdenum-pterin binding AC028_02205 IPR011868 Molybdate ABC transporter, ATP-binding protein AC028_02205 IPR015852 ABC transporter, molybdenum import, ModC AC028_02205 IPR008995 Molybdate/tungstate binding, C-terminal AC028_02240 IPR036779 LysM domain superfamily AC028_02240 IPR018392 LysM domain AC028_02240 IPR038063 L,D-transpeptidase catalytic domain-like AC028_02240 IPR005490 L,D-transpeptidase catalytic domain AC028_02245 IPR007340 Opacity-associated protein A AC028_02245 IPR011055 Duplicated hybrid motif AC028_02245 IPR016047 Peptidase M23 AC028_02250 IPR010917 TonB-dependent receptor, conserved site AC028_02250 IPR012910 TonB-dependent receptor, plug domain AC028_02250 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_02250 IPR010105 TonB-dependent siderophore receptor AC028_02250 IPR039423 TonB-dependent receptor-like AC028_02250 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_02250 IPR010916 TonB box, conserved site AC028_02250 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_02270 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02270 IPR009057 Homeobox-like domain superfamily AC028_02270 IPR002514 Transposase IS3/IS911family AC028_02275 IPR012337 Ribonuclease H-like superfamily AC028_02275 IPR001584 Integrase, catalytic core AC028_02275 IPR025948 HTH-like domain AC028_02275 IPR036397 Ribonuclease H superfamily AC028_02285 IPR008490 Transposase InsH, N-terminal AC028_02285 IPR002559 Transposase, IS4-like AC028_02290 IPR008490 Transposase InsH, N-terminal AC028_02290 IPR002559 Transposase, IS4-like AC028_02295 IPR005474 Transketolase, N-terminal AC028_02295 IPR033247 Transketolase family AC028_02295 IPR033248 Transketolase, C-terminal domain AC028_02295 IPR005478 Transketolase, bacterial-like AC028_02295 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_02295 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AC028_02295 IPR029061 Thiamin diphosphate-binding fold AC028_02295 IPR020826 Transketolase binding site AC028_02310 IPR024163 Aerotolerance regulator, N-terminal AC028_02310 IPR022933 Uncharacterised protein family UPF0353 AC028_02310 IPR036465 von Willebrand factor A-like domain superfamily AC028_02310 IPR002035 von Willebrand factor, type A AC028_02330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02330 IPR041628 ChlI/MoxR, AAA lid domain AC028_02330 IPR011703 ATPase, AAA-3 AC028_02335 IPR005644 NolW-like AC028_02335 IPR004845 Type II secretion system GspD, conserved site AC028_02335 IPR004846 Type II/III secretion system AC028_02335 IPR011662 Secretin/TonB, short N-terminal domain AC028_02335 IPR013355 Type IV pilus secretin PilQ AC028_02335 IPR038591 NolW-like superfamily AC028_02335 IPR001775 GspD/PilQ family AC028_02335 IPR021731 AMIN domain AC028_02360 IPR012338 Beta-lactamase/transpeptidase-like AC028_02360 IPR031376 Penicillin-binding protein, OB-like domain AC028_02360 IPR036950 Penicillin binding protein transglycosylase domain AC028_02360 IPR023346 Lysozyme-like domain superfamily AC028_02360 IPR001264 Glycosyl transferase, family 51 AC028_02360 IPR001460 Penicillin-binding protein, transpeptidase AC028_02370 IPR010953 Citrate synthase, type I AC028_02370 IPR016142 Citrate synthase-like, large alpha subdomain AC028_02370 IPR036969 Citrate synthase superfamily AC028_02370 IPR024176 Citrate synthase, bacterial-type AC028_02370 IPR019810 Citrate synthase active site AC028_02370 IPR016143 Citrate synthase-like, small alpha subdomain AC028_02370 IPR002020 Citrate synthase AC028_02375 IPR034704 L28p-like AC028_02375 IPR027493 Ribosomal protein L31 type B AC028_02375 IPR042105 Ribosomal protein L31 superfamily AC028_02375 IPR002150 Ribosomal protein L31 AC028_02380 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AC028_02380 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA AC028_02380 IPR036452 Ribonucleoside hydrolase-like AC028_02380 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_02380 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site AC028_02385 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_02385 IPR001650 Helicase, C-terminal AC028_02385 IPR012340 Nucleic acid-binding, OB-fold AC028_02385 IPR004609 ATP-dependent DNA helicase RecG AC028_02385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02385 IPR011545 DEAD/DEAH box helicase domain AC028_02385 IPR033454 RecG, wedge domain AC028_02390 IPR035959 RutC-like superfamily AC028_02390 IPR006056 RidA family AC028_02390 IPR019897 RidA, conserved site AC028_02390 IPR006175 YjgF/YER057c/UK114 family AC028_02395 IPR013974 SAF domain AC028_02395 IPR017654 Galactarate dehydratase GarD-like AC028_02395 IPR007392 D-galactarate/Altronate dehydratase, C-terminal AC028_02400 IPR023614 Porin domain superfamily AC028_02400 IPR005318 Outer membrane porin, bacterial AC028_02405 IPR029017 Enolase-like, N-terminal AC028_02405 IPR036849 Enolase-like, C-terminal domain superfamily AC028_02405 IPR029065 Enolase C-terminal domain-like AC028_02405 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_02405 IPR017653 Glucarate dehydratase AC028_02405 IPR034593 Mandelate racemase-like AC028_02405 IPR034598 D-Glucarate dehydratase-like AC028_02405 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_02410 IPR036259 MFS transporter superfamily AC028_02410 IPR020846 Major facilitator superfamily domain AC028_02410 IPR000849 Sugar phosphate transporter AC028_02410 IPR011701 Major facilitator superfamily AC028_02415 IPR015590 Aldehyde dehydrogenase domain AC028_02415 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_02415 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_02415 IPR016161 Aldehyde/histidinol dehydrogenase AC028_02420 IPR013785 Aldolase-type TIM barrel AC028_02420 IPR002220 DapA-like AC028_02420 IPR017655 5-dehydro-4-deoxyglucarate dehydratase AC028_02425 IPR036390 Winged helix DNA-binding domain superfamily AC028_02425 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02425 IPR000847 Transcription regulator HTH, LysR AC028_02425 IPR005119 LysR, substrate-binding AC028_02430 IPR004095 TGS AC028_02430 IPR012676 TGS-like AC028_02430 IPR007685 RelA/SpoT AC028_02430 IPR004811 RelA/SpoT family AC028_02430 IPR003607 HD/PDEase domain AC028_02430 IPR033655 RelA, TGS domain AC028_02430 IPR012675 Beta-grasp domain superfamily AC028_02430 IPR002912 ACT domain AC028_02435 IPR003716 DNA-directed RNA polymerase, omega subunit AC028_02435 IPR036161 RPB6/omega subunit-like superfamily AC028_02435 IPR012293 RNA polymerase subunit, RPB6/omega AC028_02435 IPR006110 RNA polymerase, subunit omega/K/RPB6 AC028_02440 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AC028_02440 IPR008144 Guanylate kinase-like domain AC028_02440 IPR017665 Guanylate kinase AC028_02440 IPR020590 Guanylate kinase, conserved site AC028_02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02445 IPR005229 Conserved hypothetical protein CHP00255 AC028_02445 IPR013551 Domain of unknown function DUF1732 AC028_02445 IPR013527 YicC-like, N-terminal AC028_02450 IPR018336 Ribonuclease PH, conserved site AC028_02450 IPR002381 Ribonuclease PH, bacterial-type AC028_02450 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_02450 IPR027408 PNPase/RNase PH domain superfamily AC028_02450 IPR036345 Exoribonuclease, PH domain 2 superfamily AC028_02450 IPR015847 Exoribonuclease, phosphorolytic domain 2 AC028_02450 IPR001247 Exoribonuclease, phosphorolytic domain 1 AC028_02460 IPR002637 Ham1-like protein AC028_02460 IPR020922 dITP/XTP pyrophosphatase AC028_02460 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_02465 IPR034505 Anaerobic coproporphyrinogen-III oxidase AC028_02465 IPR006638 Elp3/MiaB/NifB AC028_02465 IPR007197 Radical SAM AC028_02465 IPR023404 Radical SAM, alpha/beta horseshoe AC028_02465 IPR004559 Heme chaperone HemW-like AC028_02465 IPR010723 HemN, C-terminal AC028_02480 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AC028_02480 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AC028_02480 IPR036005 Creatinase/aminopeptidase-like AC028_02480 IPR022846 Xaa-Pro dipeptidase AC028_02480 IPR000994 Peptidase M24 AC028_02485 IPR000994 Peptidase M24 AC028_02485 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AC028_02485 IPR036005 Creatinase/aminopeptidase-like AC028_02485 IPR007865 Aminopeptidase P, N-terminal AC028_02485 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AC028_02485 IPR001714 Peptidase M24, methionine aminopeptidase AC028_02490 IPR036255 YgfB-like superfamily AC028_02490 IPR011978 Uncharacterised protein family UPF0149 AC028_02500 IPR036192 Cell division protein ZapA-like superfamily AC028_02500 IPR007838 Cell division protein ZapA-like AC028_02505 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AC028_02505 IPR037171 NagB/RpiA transferase-like AC028_02505 IPR002698 5-formyltetrahydrofolate cyclo-ligase AC028_02515 IPR037171 NagB/RpiA transferase-like AC028_02515 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AC028_02515 IPR004788 Ribose 5-phosphate isomerase, type A AC028_02525 IPR013026 Tetratricopeptide repeat-containing domain AC028_02525 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_02525 IPR019734 Tetratricopeptide repeat AC028_02525 IPR032698 Protein SirB1, N-terminal AC028_02530 IPR024935 Rubredoxin domain AC028_02530 IPR024934 Rubredoxin-like domain AC028_02530 IPR024922 Rubredoxin AC028_02530 IPR018527 Rubredoxin, iron-binding site AC028_02535 IPR036206 Thiamin phosphate synthase superfamily AC028_02535 IPR013785 Aldolase-type TIM barrel AC028_02535 IPR022998 Thiamine phosphate synthase/TenI AC028_02535 IPR034291 Thiamine phosphate synthase AC028_02545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_02545 IPR015424 Pyridoxal phosphate-dependent transferase AC028_02545 IPR005814 Aminotransferase class-III AC028_02545 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AC028_02545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_02550 IPR016032 Signal transduction response regulator, C-terminal effector AC028_02550 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_02550 IPR041617 MalT-like TPR region AC028_02550 IPR000792 Transcription regulator LuxR, C-terminal AC028_02550 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02550 IPR023768 Transcriptional regulator HTH-type, MalT AC028_02555 IPR000923 Blue (type 1) copper domain AC028_02555 IPR014068 Azurin AC028_02555 IPR008972 Cupredoxin AC028_02555 IPR028871 Blue (type 1) copper protein, binding site AC028_02560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_02560 IPR015424 Pyridoxal phosphate-dependent transferase AC028_02560 IPR005861 Histidinol-phosphate aminotransferase family AC028_02560 IPR004839 Aminotransferase, class I/classII AC028_02560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_02570 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit AC028_02570 IPR009056 Cytochrome c-like domain AC028_02570 IPR036909 Cytochrome c-like domain superfamily AC028_02575 IPR014105 Carotenoid/retinoid oxidoreductase AC028_02575 IPR002937 Amine oxidase AC028_02575 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_02590 IPR005814 Aminotransferase class-III AC028_02590 IPR004636 Acetylornithine/Succinylornithine transaminase family AC028_02590 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_02590 IPR015424 Pyridoxal phosphate-dependent transferase AC028_02590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_02595 IPR028325 Voltage-gated potassium channel AC028_02595 IPR005821 Ion transport domain AC028_02595 IPR000595 Cyclic nucleotide-binding domain AC028_02595 IPR018488 Cyclic nucleotide-binding, conserved site AC028_02595 IPR018490 Cyclic nucleotide-binding-like AC028_02595 IPR014710 RmlC-like jelly roll fold AC028_02600 IPR036291 NAD(P)-binding domain superfamily AC028_02600 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_02600 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_02610 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AC028_02610 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_02615 IPR021134 Bestrophin/UPF0187 AC028_02625 IPR000713 Mur ligase, N-terminal catalytic domain AC028_02625 IPR013221 Mur ligase, central AC028_02625 IPR036615 Mur ligase, C-terminal domain superfamily AC028_02625 IPR004101 Mur ligase, C-terminal AC028_02625 IPR036565 Mur-like, catalytic domain superfamily AC028_02625 IPR005757 Murein peptide ligase AC028_02630 IPR000850 Adenylate kinase/UMP-CMP kinase AC028_02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_02630 IPR033690 Adenylate kinase, conserved site AC028_02635 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 AC028_02635 IPR035966 Phosphofructokinase superfamily AC028_02635 IPR000023 Phosphofructokinase domain AC028_02635 IPR022953 ATP-dependent 6-phosphofructokinase AC028_02645 IPR004131 Pyrophosphate-energised proton pump AC028_02655 IPR008162 Inorganic pyrophosphatase AC028_02655 IPR036649 Inorganic pyrophosphatase superfamily AC028_02665 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_02665 IPR012910 TonB-dependent receptor, plug domain AC028_02665 IPR039426 Vitamin B12 transporter BtuB-like AC028_02665 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_02665 IPR010917 TonB-dependent receptor, conserved site AC028_02665 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_02665 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_02665 IPR010916 TonB box, conserved site AC028_02670 IPR029062 Class I glutamine amidotransferase-like AC028_02670 IPR020449 Transcription regulator HTH, AraC- type AC028_02670 IPR018062 HTH domain AraC-type, conserved site AC028_02670 IPR018060 DNA binding HTH domain, AraC-type AC028_02670 IPR009057 Homeobox-like domain superfamily AC028_02675 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02675 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_02675 IPR040970 CadC C-terminal domain 1 AC028_02675 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_02675 IPR039420 Transcriptional regulatory protein WalR-like AC028_02675 IPR016032 Signal transduction response regulator, C-terminal effector AC028_02680 IPR037509 Phosphomethylpyrimidine synthase AC028_02680 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AC028_02680 IPR038521 ThiC/Bza superfamily AC028_02680 IPR025747 ThiC-associated domain AC028_02685 IPR012910 TonB-dependent receptor, plug domain AC028_02685 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_02685 IPR010916 TonB box, conserved site AC028_02685 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_02685 IPR039426 Vitamin B12 transporter BtuB-like AC028_02685 IPR010917 TonB-dependent receptor, conserved site AC028_02685 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_02685 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_02690 IPR003660 HAMP domain AC028_02690 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_02690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_02690 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_02690 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_02690 IPR004090 Chemotaxis methyl-accepting receptor AC028_02695 IPR000101 Gamma-glutamyltranspeptidase AC028_02695 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_02700 IPR014359 Ketol-acid reductoisomerase, prokaryotic AC028_02700 IPR000506 Ketol-acid reductoisomerase, C-terminal AC028_02700 IPR013116 Ketol-acid reductoisomerase, N-terminal AC028_02700 IPR036291 NAD(P)-binding domain superfamily AC028_02700 IPR013023 Ketol-acid reductoisomerase AC028_02700 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_02705 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AC028_02705 IPR029035 DHS-like NAD/FAD-binding domain superfamily AC028_02705 IPR039368 Acetolactate synthase large subunit, TPP binding domain AC028_02705 IPR029061 Thiamin diphosphate-binding fold AC028_02705 IPR012000 Thiamine pyrophosphate enzyme, central domain AC028_02705 IPR000399 TPP-binding enzyme, conserved site AC028_02705 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AC028_02705 IPR012846 Acetolactate synthase, large subunit, biosynthetic AC028_02715 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AC028_02715 IPR005789 Threonine dehydratase, catabolic AC028_02715 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_02715 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_02720 IPR005671 2-isopropylmalate synthase, bacterial-type AC028_02720 IPR000891 Pyruvate carboxyltransferase AC028_02720 IPR013785 Aldolase-type TIM barrel AC028_02720 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AC028_02720 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AC028_02720 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AC028_02725 IPR004429 Isopropylmalate dehydrogenase AC028_02725 IPR024084 Isopropylmalate dehydrogenase-like domain AC028_02725 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AC028_02730 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_02730 IPR004431 3-isopropylmalate dehydratase, small subunit AC028_02730 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AC028_02730 IPR033940 3-isopropylmalate dehydratase, swivel domain AC028_02735 IPR004430 3-isopropylmalate dehydratase, large subunit AC028_02735 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AC028_02735 IPR036008 Aconitase, iron-sulfur domain AC028_02735 IPR018136 Aconitase family, 4Fe-4S cluster binding site AC028_02735 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AC028_02735 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AC028_02740 IPR000847 Transcription regulator HTH, LysR AC028_02740 IPR036390 Winged helix DNA-binding domain superfamily AC028_02740 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02745 IPR000160 GGDEF domain AC028_02745 IPR029787 Nucleotide cyclase AC028_02745 IPR033416 Periplasmic sensor domain CHASE7 AC028_02755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_02755 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AC028_02760 IPR003423 Outer membrane efflux protein AC028_02760 IPR010130 Type I secretion outer membrane protein, TolC AC028_02765 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AC028_02765 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily AC028_02765 IPR039901 3-deoxy-D-manno-octulosonic acid transferase AC028_02770 IPR004960 Bacterial lipid A biosynthesis acyltransferase AC028_02770 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AC028_02805 IPR012337 Ribonuclease H-like superfamily AC028_02805 IPR025948 HTH-like domain AC028_02805 IPR001584 Integrase, catalytic core AC028_02805 IPR036397 Ribonuclease H superfamily AC028_02810 IPR009057 Homeobox-like domain superfamily AC028_02810 IPR002514 Transposase IS3/IS911family AC028_02815 IPR008490 Transposase InsH, N-terminal AC028_02815 IPR002559 Transposase, IS4-like AC028_02820 IPR004839 Aminotransferase, class I/classII AC028_02820 IPR015424 Pyridoxal phosphate-dependent transferase AC028_02820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_02820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_02835 IPR026402 Chitooligosaccharide deacetylase NodB AC028_02835 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AC028_02835 IPR002509 NodB homology domain AC028_02840 IPR002109 Glutaredoxin AC028_02840 IPR004480 Monothiol glutaredoxin-related AC028_02840 IPR014434 Monothiol glutaredoxin AC028_02840 IPR033658 Glutaredoxin, PICOT-like AC028_02840 IPR036249 Thioredoxin-like superfamily AC028_02855 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_02855 IPR032466 Metal-dependent hydrolase AC028_02855 IPR006680 Amidohydrolase-related AC028_02855 IPR020043 Deacetylase Atu3266-like AC028_02860 IPR006680 Amidohydrolase-related AC028_02860 IPR023512 Deaminase MtaD/DadD AC028_02860 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_02860 IPR032466 Metal-dependent hydrolase AC028_02880 IPR003797 DegV AC028_02885 IPR023635 Peptide deformylase AC028_02885 IPR036821 Peptide deformylase superfamily AC028_02895 IPR006659 Arsenate reductase AC028_02895 IPR006660 Arsenate reductase-like AC028_02895 IPR036249 Thioredoxin-like superfamily AC028_02910 IPR003921 Cellulose synthase, subunit C AC028_02910 IPR008410 Cellulose synthase operon C, C-terminal AC028_02910 IPR013026 Tetratricopeptide repeat-containing domain AC028_02910 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_02910 IPR019734 Tetratricopeptide repeat AC028_02915 IPR008928 Six-hairpin glycosidase superfamily AC028_02915 IPR012341 Six-hairpin glycosidase-like superfamily AC028_02915 IPR002037 Glycoside hydrolase, family 8 AC028_02920 IPR008979 Galactose-binding-like domain superfamily AC028_02920 IPR018513 Cellulose synthase BcsB, bacterial AC028_02920 IPR003920 Cellulose synthase, subunit B AC028_02925 IPR009875 PilZ domain AC028_02925 IPR029044 Nucleotide-diphospho-sugar transferases AC028_02925 IPR001173 Glycosyltransferase 2-like AC028_02925 IPR005150 Cellulose synthase AC028_02925 IPR003919 Cellulose synthase, subunit A AC028_02940 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AC028_02940 IPR007229 Nicotinate phosphoribosyltransferase family AC028_02940 IPR006406 Nicotinate phosphoribosyltransferase AC028_02940 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain AC028_02940 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase AC028_02965 IPR029044 Nucleotide-diphospho-sugar transferases AC028_02980 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_02980 IPR030149 TonB-dependent siderophore receptor FcuA/FatA AC028_02980 IPR012910 TonB-dependent receptor, plug domain AC028_02980 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_02980 IPR039423 TonB-dependent receptor-like AC028_02980 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_02980 IPR010916 TonB box, conserved site AC028_02980 IPR010917 TonB-dependent receptor, conserved site AC028_02980 IPR010105 TonB-dependent siderophore receptor AC028_02990 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AC028_02990 IPR017722 Phosphonate utilization transcriptional regulator PhnR AC028_02990 IPR011663 UbiC transcription regulator-associated AC028_02990 IPR036390 Winged helix DNA-binding domain superfamily AC028_02990 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_02990 IPR000524 Transcription regulator HTH, GntR AC028_03000 IPR001775 GspD/PilQ family AC028_03000 IPR004846 Type II/III secretion system AC028_03000 IPR013356 Type II secretion system GspD AC028_03000 IPR038591 NolW-like superfamily AC028_03000 IPR004845 Type II secretion system GspD, conserved site AC028_03000 IPR005644 NolW-like AC028_03010 IPR034756 Type II secretion system (T2SS), protein M subtype b AC028_03015 IPR007813 Fimbrial assembly PilN AC028_03020 IPR038072 GspK, central domain superfamily AC028_03020 IPR005628 General secretion pathway protein K AC028_03025 IPR012902 Prokaryotic N-terminal methylation site AC028_03030 IPR012902 Prokaryotic N-terminal methylation site AC028_03030 IPR010052 Type II secretion system protein I AC028_03035 IPR022346 General secretion pathway, GspH AC028_03035 IPR002416 Type II secretion system protein H AC028_03040 IPR000983 Bacterial general secretion pathway protein G-type pilin AC028_03040 IPR012902 Prokaryotic N-terminal methylation site AC028_03040 IPR010054 General secretion pathway protein G AC028_03040 IPR013545 Type II secretion system protein G AC028_03045 IPR003004 GspF/PilC family AC028_03045 IPR001992 Type II secretion system conserved site AC028_03045 IPR018076 Type II secretion system F domain AC028_03045 IPR042094 Type II secretion system F domain superfamily AC028_03050 IPR042181 Type II secretion system, protein E, N-terminal AC028_03050 IPR003593 AAA+ ATPase domain AC028_03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03050 IPR001482 Type II/IV secretion system protein AC028_03050 IPR037257 General secretory system II, protein E, N-terminal superfamily AC028_03050 IPR013369 Type II secretion system GspE AC028_03050 IPR007831 General secretory system II, protein E, N-terminal AC028_03055 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_03055 IPR036852 Peptidase S8/S53 domain superfamily AC028_03055 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_03055 IPR000209 Peptidase S8/S53 domain AC028_03055 IPR034176 Peptidase MprA-like catalytic domain AC028_03055 IPR015500 Peptidase S8, subtilisin-related AC028_03055 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_03055 IPR022398 Peptidase S8, subtilisin, His-active site AC028_03065 IPR002559 Transposase, IS4-like AC028_03065 IPR008490 Transposase InsH, N-terminal AC028_03080 IPR029062 Class I glutamine amidotransferase-like AC028_03080 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal AC028_03080 IPR010073 Phosphoribosylformylglycinamidine synthase PurL AC028_03080 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AC028_03080 IPR010918 PurM-like, C-terminal domain AC028_03080 IPR036676 PurM-like, C-terminal domain superfamily AC028_03080 IPR017926 Glutamine amidotransferase AC028_03080 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AC028_03080 IPR036921 PurM-like, N-terminal domain superfamily AC028_03085 IPR012336 Thioredoxin-like fold AC028_03085 IPR033954 Disulphide bond isomerase, DsbC/G AC028_03085 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AC028_03085 IPR017937 Thioredoxin, conserved site AC028_03085 IPR013766 Thioredoxin domain AC028_03085 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AC028_03085 IPR036249 Thioredoxin-like superfamily AC028_03090 IPR013762 Integrase-like, catalytic domain superfamily AC028_03090 IPR002104 Integrase, catalytic domain AC028_03090 IPR010998 Integrase/recombinase, N-terminal AC028_03090 IPR004107 Integrase, SAM-like, N-terminal AC028_03090 IPR011932 Tyrosine recombinase XerD AC028_03090 IPR023009 Tyrosine recombinase XerC/XerD AC028_03090 IPR011010 DNA breaking-rejoining enzyme, catalytic core AC028_03105 IPR005495 Permease LptG/LptF-related AC028_03105 IPR030923 LPS export ABC transporter permease LptG AC028_03115 IPR023042 Peptidase M17, leucine aminopeptidase AC028_03115 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AC028_03115 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AC028_03115 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AC028_03130 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_03130 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AC028_03130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_03130 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AC028_03130 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AC028_03130 IPR002300 Aminoacyl-tRNA synthetase, class Ia AC028_03130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_03130 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AC028_03130 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AC028_03130 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AC028_03130 IPR002303 Valine-tRNA ligase AC028_03135 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_03135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_03135 IPR010917 TonB-dependent receptor, conserved site AC028_03135 IPR010916 TonB box, conserved site AC028_03135 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_03135 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_03135 IPR039426 Vitamin B12 transporter BtuB-like AC028_03135 IPR012910 TonB-dependent receptor, plug domain AC028_03140 IPR023346 Lysozyme-like domain superfamily AC028_03140 IPR008258 Transglycosylase SLT domain 1 AC028_03160 IPR000462 CDP-alcohol phosphatidyltransferase AC028_03160 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AC028_03170 IPR004154 Anticodon-binding AC028_03170 IPR036621 Anticodon-binding domain superfamily AC028_03170 IPR002316 Proline-tRNA ligase, class IIa AC028_03170 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AC028_03170 IPR033730 Prokaryote proline-tRNA ligase core domain AC028_03170 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_03170 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AC028_03170 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AC028_03170 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AC028_03170 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AC028_03195 IPR001091 Restriction/modification DNA-methylase AC028_03195 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_03195 IPR002941 DNA methylase N-4/N-6 AC028_03195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_03210 IPR010093 SinI-like, DNA-binding domain AC028_03210 IPR041657 Helix-turn-helix domain, group 17 AC028_03210 IPR009061 Putative DNA-binding domain superfamily AC028_03215 IPR026325 Protein of unknown function DUF932 AC028_03225 IPR007948 Protein of unknown function DUF736 AC028_03255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03255 IPR025669 AAA domain AC028_03280 IPR005119 LysR, substrate-binding AC028_03280 IPR000847 Transcription regulator HTH, LysR AC028_03280 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03280 IPR036390 Winged helix DNA-binding domain superfamily AC028_03285 IPR004734 Multidrug resistance protein AC028_03285 IPR011701 Major facilitator superfamily AC028_03285 IPR020846 Major facilitator superfamily domain AC028_03285 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AC028_03285 IPR036259 MFS transporter superfamily AC028_03290 IPR020846 Major facilitator superfamily domain AC028_03290 IPR036259 MFS transporter superfamily AC028_03290 IPR011701 Major facilitator superfamily AC028_03305 IPR036390 Winged helix DNA-binding domain superfamily AC028_03305 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03305 IPR000847 Transcription regulator HTH, LysR AC028_03305 IPR037416 Nodulation protein D, PBP2 AC028_03305 IPR005119 LysR, substrate-binding AC028_03310 IPR013785 Aldolase-type TIM barrel AC028_03310 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AC028_03310 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_03310 IPR023753 FAD/NAD(P)-binding domain AC028_03315 IPR036390 Winged helix DNA-binding domain superfamily AC028_03315 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03315 IPR000847 Transcription regulator HTH, LysR AC028_03315 IPR005119 LysR, substrate-binding AC028_03325 IPR003688 Type IV secretion system protein TraG/VirD4 AC028_03325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03335 IPR001482 Type II/IV secretion system protein AC028_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03335 IPR014149 Conjugative transfer, TrbB AC028_03340 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AC028_03350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03350 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain AC028_03350 IPR004346 CagE, TrbE, VirB component of type IV transporter system AC028_03350 IPR003593 AAA+ ATPase domain AC028_03380 IPR042217 Type IV secretion system, VirB10/TrbI AC028_03380 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AC028_03390 IPR002547 tRNA-binding domain AC028_03390 IPR015413 Methionyl/Leucyl tRNA synthetase AC028_03390 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_03390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_03390 IPR012340 Nucleic acid-binding, OB-fold AC028_03390 IPR029038 Methionyl-tRNA synthetase, Zn-domain AC028_03390 IPR033911 Methioninyl-tRNA synthetase core domain AC028_03390 IPR014758 Methionyl-tRNA synthetase AC028_03390 IPR023458 Methionine-tRNA ligase, type 1 AC028_03390 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_03390 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AC028_03390 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AC028_03420 IPR039425 RNA polymerase sigma-70 like AC028_03420 IPR014284 RNA polymerase sigma-70 like domain AC028_03420 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03420 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_03420 IPR013325 RNA polymerase sigma factor, region 2 AC028_03420 IPR007630 RNA polymerase sigma-70 region 4 AC028_03420 IPR007627 RNA polymerase sigma-70 region 2 AC028_03445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_03445 IPR003333 Mycolic acid cyclopropane synthase AC028_03460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_03460 IPR003333 Mycolic acid cyclopropane synthase AC028_03465 IPR035709 RutC family, YoaB-like AC028_03465 IPR006175 YjgF/YER057c/UK114 family AC028_03465 IPR035959 RutC-like superfamily AC028_03465 IPR019897 RidA, conserved site AC028_03475 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AC028_03475 IPR016181 Acyl-CoA N-acyltransferase AC028_03475 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AC028_03510 IPR036259 MFS transporter superfamily AC028_03510 IPR020846 Major facilitator superfamily domain AC028_03510 IPR011701 Major facilitator superfamily AC028_03515 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AC028_03515 IPR013785 Aldolase-type TIM barrel AC028_03520 IPR004624 PhnA protein AC028_03520 IPR013988 PhnA protein, C-terminal AC028_03520 IPR013987 PhnA protein, N-terminal AC028_03530 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AC028_03535 IPR004753 Cell shape determining protein MreB AC028_03555 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AC028_03555 IPR000962 Zinc finger, DksA/TraR C4-type AC028_03555 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AC028_03565 IPR009760 Protein of unknown function DUF1328 AC028_03570 IPR002725 Protein of unknown function DUF45 AC028_03575 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal AC028_03575 IPR036291 NAD(P)-binding domain superfamily AC028_03575 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AC028_03575 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AC028_03575 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AC028_03575 IPR033524 Leu/Phe/Val dehydrogenases active site AC028_03580 IPR036709 Autotransporter beta-domain superfamily AC028_03580 IPR034061 Autotransporter serine protease peptidase domain AC028_03580 IPR015500 Peptidase S8, subtilisin-related AC028_03580 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_03580 IPR022398 Peptidase S8, subtilisin, His-active site AC028_03580 IPR005546 Autotransporter beta-domain AC028_03580 IPR036852 Peptidase S8/S53 domain superfamily AC028_03580 IPR000209 Peptidase S8/S53 domain AC028_03580 IPR011050 Pectin lyase fold/virulence factor AC028_03580 IPR006315 Outer membrane autotransporter barrel AC028_03580 IPR013425 Autotransporter-associated beta strand repeat AC028_03585 IPR020613 Thiolase, conserved site AC028_03585 IPR020616 Thiolase, N-terminal AC028_03585 IPR020615 Thiolase, acyl-enzyme intermediate active site AC028_03585 IPR016039 Thiolase-like AC028_03585 IPR002155 Thiolase AC028_03585 IPR020617 Thiolase, C-terminal AC028_03585 IPR020610 Thiolase, active site AC028_03615 IPR000977 DNA ligase, ATP-dependent AC028_03615 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_03615 IPR012340 Nucleic acid-binding, OB-fold AC028_03615 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily AC028_03615 IPR012308 DNA ligase, ATP-dependent, N-terminal AC028_03615 IPR016059 DNA ligase, ATP-dependent, conserved site AC028_03615 IPR012309 DNA ligase, ATP-dependent, C-terminal AC028_03615 IPR012310 DNA ligase, ATP-dependent, central AC028_03625 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal AC028_03625 IPR000977 DNA ligase, ATP-dependent AC028_03625 IPR012309 DNA ligase, ATP-dependent, C-terminal AC028_03625 IPR012310 DNA ligase, ATP-dependent, central AC028_03625 IPR016059 DNA ligase, ATP-dependent, conserved site AC028_03625 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily AC028_03625 IPR012340 Nucleic acid-binding, OB-fold AC028_03625 IPR012308 DNA ligase, ATP-dependent, N-terminal AC028_03630 IPR001650 Helicase, C-terminal AC028_03630 IPR003593 AAA+ ATPase domain AC028_03630 IPR013701 DEAD/H associated AC028_03630 IPR011545 DEAD/DEAH box helicase domain AC028_03630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03630 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_03640 IPR027545 Kynurenine 3-monooxygenase AC028_03640 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_03640 IPR002938 FAD-binding domain AC028_03645 IPR012156 Cold shock, CspA AC028_03645 IPR011129 Cold shock domain AC028_03645 IPR019844 Cold-shock (CSD) domain AC028_03645 IPR002059 Cold-shock protein, DNA-binding AC028_03645 IPR012340 Nucleic acid-binding, OB-fold AC028_03650 IPR000845 Nucleoside phosphorylase domain AC028_03650 IPR010044 Methylthioadenosine phosphorylase (MTAP) AC028_03650 IPR035994 Nucleoside phosphorylase superfamily AC028_03650 IPR018099 Purine phosphorylase, family 2, conserved site AC028_03660 IPR017853 Glycoside hydrolase superfamily AC028_03660 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AC028_03660 IPR001764 Glycoside hydrolase, family 3, N-terminal AC028_03660 IPR019800 Glycoside hydrolase, family 3, active site AC028_03660 IPR022956 Beta-hexosaminidase, bacterial AC028_03665 IPR007357 Deoxyribodipyrimidine photolyase-related protein AC028_03665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_03665 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AC028_03670 IPR002937 Amine oxidase AC028_03670 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_03670 IPR034721 Bacterial renalase AC028_03675 IPR001853 DSBA-like thioredoxin domain AC028_03675 IPR036249 Thioredoxin-like superfamily AC028_03685 IPR002792 TRAM domain AC028_03685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_03685 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AC028_03685 IPR030391 RNA methyltransferase TrmA, conserved site AC028_03685 IPR012340 Nucleic acid-binding, OB-fold AC028_03685 IPR010280 (Uracil-5)-methyltransferase family AC028_03685 IPR030390 RNA methyltransferase TrmA, active site AC028_03695 IPR003717 Recombination protein O, RecO AC028_03695 IPR012340 Nucleic acid-binding, OB-fold AC028_03695 IPR022572 DNA replication/recombination mediator RecO, N-terminal AC028_03695 IPR037278 ARFGAP/RecO-like zinc finger AC028_03700 IPR015946 K homology domain-like, alpha/beta AC028_03700 IPR030388 Era-type guanine nucleotide-binding (G) domain AC028_03700 IPR004044 K Homology domain, type 2 AC028_03700 IPR005662 GTP-binding protein Era AC028_03700 IPR009019 K homology domain superfamily, prokaryotic type AC028_03700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03700 IPR005225 Small GTP-binding protein domain AC028_03700 IPR006073 GTP binding domain AC028_03705 IPR011907 Ribonuclease III AC028_03705 IPR000999 Ribonuclease III domain AC028_03705 IPR036389 Ribonuclease III, endonuclease domain superfamily AC028_03705 IPR014720 Double-stranded RNA-binding domain AC028_03715 IPR019756 Peptidase S26A, signal peptidase I, serine active site AC028_03715 IPR036286 LexA/Signal peptidase-like superfamily AC028_03715 IPR000223 Peptidase S26A, signal peptidase I AC028_03715 IPR019758 Peptidase S26A, signal peptidase I, conserved site AC028_03715 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AC028_03715 IPR019533 Peptidase S26 AC028_03720 IPR000795 Transcription factor, GTP-binding domain AC028_03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03720 IPR035654 Elongation factor 4, domain IV AC028_03720 IPR013842 GTP-binding protein LepA, C-terminal AC028_03720 IPR038363 LepA, C-terminal domain superfamily AC028_03720 IPR005225 Small GTP-binding protein domain AC028_03720 IPR031157 Tr-type G domain, conserved site AC028_03720 IPR006297 Elongation factor 4 AC028_03720 IPR035647 EF-G domain III/V-like AC028_03720 IPR000640 Elongation factor EFG, domain V-like AC028_03720 IPR004161 Translation elongation factor EFTu-like, domain 2 AC028_03725 IPR011782 Peptidase S1C, Do AC028_03725 IPR009003 Peptidase S1, PA clan AC028_03725 IPR001940 Peptidase S1C AC028_03725 IPR001478 PDZ domain AC028_03725 IPR036034 PDZ superfamily AC028_03735 IPR014286 RNA polymerase sigma-70 RpoE type AC028_03735 IPR013325 RNA polymerase sigma factor, region 2 AC028_03735 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_03735 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03735 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AC028_03735 IPR007627 RNA polymerase sigma-70 region 2 AC028_03735 IPR039425 RNA polymerase sigma-70 like AC028_03735 IPR014284 RNA polymerase sigma-70 like domain AC028_03735 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AC028_03740 IPR036291 NAD(P)-binding domain superfamily AC028_03740 IPR012802 Fatty oxidation complex, alpha subunit FadJ AC028_03740 IPR001753 Enoyl-CoA hydratase/isomerase AC028_03740 IPR029045 ClpP/crotonase-like domain superfamily AC028_03740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_03740 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AC028_03740 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AC028_03740 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AC028_03760 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AC028_03760 IPR002985 Arginine decarboxylase AC028_03760 IPR041128 Arginine decarboxylase, C-terminal helical AC028_03760 IPR040634 Arginine decarboxylase, helical bundle domain AC028_03760 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AC028_03760 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AC028_03760 IPR000183 Ornithine/DAP/Arg decarboxylase AC028_03760 IPR029066 PLP-binding barrel AC028_03765 IPR035246 Spermidine synthase, tetramerisation domain AC028_03765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_03765 IPR030373 Polyamine biosynthesis domain, conserved site AC028_03765 IPR037163 Spermidine synthase, tetramerisation domain superfamily AC028_03765 IPR001045 Spermidine/spermine synthases AC028_03765 IPR030374 Polyamine biosynthesis domain AC028_03795 IPR002187 Nitrogen regulatory protein PII AC028_03795 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_03795 IPR017918 Nitrogen regulatory protein PII, conserved site AC028_03795 IPR002332 Nitrogen regulatory protein P-II, urydylation site AC028_03795 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_03800 IPR007475 Ubiquinone biosynthesis accessory factor UbiK AC028_03805 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_03805 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_03805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_03805 IPR000523 Magnesium chelatase ChlI domain AC028_03805 IPR025158 Mg chelatase-related protein, C-terminal domain AC028_03805 IPR004482 Mg chelatase-related protein AC028_03805 IPR001208 MCM domain AC028_03805 IPR003593 AAA+ ATPase domain AC028_03820 IPR035919 EAL domain superfamily AC028_03820 IPR001633 EAL domain AC028_03820 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AC028_03825 IPR005804 Fatty acid desaturase domain AC028_03830 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_03830 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_03830 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AC028_03830 IPR012675 Beta-grasp domain superfamily AC028_03830 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_03830 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_03830 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_03830 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_03830 IPR017938 Riboflavin synthase-like beta-barrel AC028_03830 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AC028_03835 IPR001647 DNA-binding HTH domain, TetR-type AC028_03835 IPR023764 Transcriptional repressor HTH, FabR AC028_03835 IPR009057 Homeobox-like domain superfamily AC028_03855 IPR036025 tRNA-splicing ligase RtcB-like superfamily AC028_03855 IPR001233 tRNA-splicing ligase, RtcB AC028_03900 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03900 IPR039420 Transcriptional regulatory protein WalR-like AC028_03900 IPR001789 Signal transduction response regulator, receiver domain AC028_03900 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_03900 IPR011006 CheY-like superfamily AC028_03905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_03905 IPR005467 Histidine kinase domain AC028_03905 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_03905 IPR003594 Histidine kinase/HSP90-like ATPase AC028_03905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_03905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_03905 IPR013727 Two-component sensor kinase, N-terminal AC028_03930 IPR036034 PDZ superfamily AC028_03930 IPR011782 Peptidase S1C, Do AC028_03930 IPR009003 Peptidase S1, PA clan AC028_03930 IPR001940 Peptidase S1C AC028_03930 IPR001478 PDZ domain AC028_03950 IPR002549 Transmembrane protein TqsA-like AC028_03955 IPR010976 Beta-phosphoglucomutase hydrolase AC028_03955 IPR010972 Beta-phosphoglucomutase AC028_03955 IPR036412 HAD-like superfamily AC028_03955 IPR006439 HAD hydrolase, subfamily IA AC028_03955 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AC028_03955 IPR041492 Haloacid dehalogenase-like hydrolase AC028_03955 IPR023214 HAD superfamily AC028_03960 IPR023042 Peptidase M17, leucine aminopeptidase AC028_03960 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AC028_03960 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AC028_03960 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AC028_03970 IPR011614 Catalase core domain AC028_03970 IPR020835 Catalase superfamily AC028_03970 IPR018028 Catalase, mono-functional, haem-containing AC028_03970 IPR024168 Catalase, SrpA-type, predicted AC028_03985 IPR016032 Signal transduction response regulator, C-terminal effector AC028_03985 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_03985 IPR001789 Signal transduction response regulator, receiver domain AC028_03985 IPR000792 Transcription regulator LuxR, C-terminal AC028_03985 IPR011006 CheY-like superfamily AC028_03990 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AC028_03990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_03995 IPR022824 Multidrug resistance protein MdtA AC028_03995 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AC028_03995 IPR006143 RND efflux pump, membrane fusion protein AC028_04000 IPR003593 AAA+ ATPase domain AC028_04000 IPR003439 ABC transporter-like AC028_04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04000 IPR017871 ABC transporter, conserved site AC028_04020 IPR004626 RarD protein AC028_04020 IPR000620 EamA domain AC028_04025 IPR004779 Carboxylate/Amino Acid/Amine Transporter AC028_04025 IPR000620 EamA domain AC028_04040 IPR001279 Metallo-beta-lactamase AC028_04040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_04045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_04045 IPR024109 Tryptophan-tRNA ligase, bacterial-type AC028_04045 IPR036913 YegP-like superfamily AC028_04045 IPR002305 Aminoacyl-tRNA synthetase, class Ic AC028_04045 IPR002306 Tryptophan-tRNA ligase AC028_04050 IPR008462 CsbD-like domain AC028_04050 IPR026042 Stress response protein YjbJ AC028_04050 IPR036629 YjbJ superfamily AC028_04065 IPR020855 Ureohydrolase, manganese-binding site AC028_04065 IPR014033 Arginase AC028_04065 IPR006035 Ureohydrolase AC028_04065 IPR023696 Ureohydrolase domain superfamily AC028_04090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04090 IPR039430 Thymidylate kinase-like domain AC028_04090 IPR018094 Thymidylate kinase AC028_04105 IPR004619 Type III pantothenate kinase AC028_04110 IPR030855 Bifunctional ligase/repressor BirA AC028_04110 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AC028_04110 IPR004409 Biotin operon repressor, helix-turn-helix domain AC028_04110 IPR003142 Biotin protein ligase, C-terminal AC028_04110 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AC028_04110 IPR008988 Transcriptional repressor, C-terminal AC028_04110 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04110 IPR036390 Winged helix DNA-binding domain superfamily AC028_04110 IPR013196 Helix-turn-helix, type 11 AC028_04120 IPR024079 Metallopeptidase, catalytic domain superfamily AC028_04120 IPR010384 MtfA family AC028_04120 IPR042252 MtfA, N-terminal AC028_04135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_04135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_04135 IPR003660 HAMP domain AC028_04135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_04135 IPR003594 Histidine kinase/HSP90-like ATPase AC028_04135 IPR005467 Histidine kinase domain AC028_04135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_04140 IPR039420 Transcriptional regulatory protein WalR-like AC028_04140 IPR001789 Signal transduction response regulator, receiver domain AC028_04140 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_04140 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04140 IPR011006 CheY-like superfamily AC028_04150 IPR018517 tRNA-dihydrouridine synthase, conserved site AC028_04150 IPR001269 tRNA-dihydrouridine synthase AC028_04150 IPR004653 tRNA-dihydrouridine(20/20a) synthase AC028_04150 IPR035587 DUS-like, FMN-binding domain AC028_04150 IPR013785 Aldolase-type TIM barrel AC028_04165 IPR024708 Catalase active site AC028_04165 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 AC028_04165 IPR011614 Catalase core domain AC028_04165 IPR037060 Catalase core domain superfamily AC028_04165 IPR002226 Catalase haem-binding site AC028_04165 IPR018028 Catalase, mono-functional, haem-containing AC028_04165 IPR020835 Catalase superfamily AC028_04165 IPR010582 Catalase immune-responsive domain AC028_04175 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AC028_04175 IPR039000 ATP-dependent DNA helicase DinG AC028_04175 IPR010614 DEAD2 AC028_04175 IPR006555 ATP-dependent helicase, C-terminal AC028_04175 IPR001650 Helicase, C-terminal AC028_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04190 IPR036291 NAD(P)-binding domain superfamily AC028_04190 IPR022893 Shikimate dehydrogenase family AC028_04190 IPR041121 SDH, C-terminal AC028_04190 IPR011342 Shikimate dehydrogenase AC028_04190 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AC028_04190 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AC028_04200 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AC028_04200 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AC028_04200 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_04200 IPR001094 Flavodoxin-like AC028_04200 IPR029039 Flavoprotein-like superfamily AC028_04200 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_04200 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_04200 IPR017938 Riboflavin synthase-like beta-barrel AC028_04200 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_04200 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AC028_04200 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AC028_04200 IPR008254 Flavodoxin/nitric oxide synthase AC028_04210 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04210 IPR005119 LysR, substrate-binding AC028_04210 IPR000847 Transcription regulator HTH, LysR AC028_04210 IPR036390 Winged helix DNA-binding domain superfamily AC028_04220 IPR013785 Aldolase-type TIM barrel AC028_04220 IPR001731 Delta-aminolevulinic acid dehydratase AC028_04220 IPR030656 Delta-aminolevulinic acid dehydratase, active site AC028_04250 IPR029058 Alpha/Beta hydrolase fold AC028_04250 IPR002469 Dipeptidylpeptidase IV, N-terminal domain AC028_04250 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AC028_04250 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_04255 IPR036249 Thioredoxin-like superfamily AC028_04255 IPR010987 Glutathione S-transferase, C-terminal-like AC028_04255 IPR004045 Glutathione S-transferase, N-terminal AC028_04255 IPR004046 Glutathione S-transferase, C-terminal AC028_04255 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_04290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04290 IPR003593 AAA+ ATPase domain AC028_04290 IPR003439 ABC transporter-like AC028_04290 IPR017871 ABC transporter, conserved site AC028_04300 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_04300 IPR001387 Cro/C1-type helix-turn-helix domain AC028_04315 IPR003735 Metal-sensitive transcriptional repressor AC028_04315 IPR038390 Metal-sensitive transcriptional repressor superfamily AC028_04320 IPR023500 Zinc transporter ZitB AC028_04320 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AC028_04320 IPR002524 Cation efflux protein AC028_04320 IPR027469 Cation efflux transmembrane domain superfamily AC028_04325 IPR008213 CpcD-like domain AC028_04325 IPR017938 Riboflavin synthase-like beta-barrel AC028_04325 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_04325 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_04325 IPR015701 Ferredoxin--NADP reductase AC028_04325 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_04325 IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type AC028_04325 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_04330 IPR003593 AAA+ ATPase domain AC028_04330 IPR003439 ABC transporter-like AC028_04330 IPR017871 ABC transporter, conserved site AC028_04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04335 IPR013525 ABC-2 type transporter AC028_04335 IPR000412 ABC-2 transporter AC028_04340 IPR036291 NAD(P)-binding domain superfamily AC028_04340 IPR013332 Ketopantoate reductase, N-terminal domain AC028_04340 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_04340 IPR013752 Ketopantoate reductase, C-terminal domain AC028_04340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_04340 IPR003710 Ketopantoate reductase ApbA/PanE AC028_04370 IPR012348 Ribonucleotide reductase-like AC028_04370 IPR000358 Ribonucleotide reductase small subunit family AC028_04370 IPR033909 Ribonucleotide reductase small subunit AC028_04370 IPR009078 Ferritin-like superfamily AC028_04380 IPR013346 Ribonucleotide reductase, class I , alpha subunit AC028_04380 IPR000788 Ribonucleotide reductase large subunit, C-terminal AC028_04380 IPR013509 Ribonucleotide reductase large subunit, N-terminal AC028_04380 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AC028_04380 IPR039718 Ribonucleoside-diphosphate reductase large subunit AC028_04380 IPR005144 ATP-cone domain AC028_04390 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AC028_04390 IPR036291 NAD(P)-binding domain superfamily AC028_04390 IPR016102 Succinyl-CoA synthetase-like AC028_04390 IPR011761 ATP-grasp fold AC028_04390 IPR013815 ATP-grasp fold, subdomain 1 AC028_04390 IPR003781 CoA-binding AC028_04390 IPR000182 GNAT domain AC028_04390 IPR016181 Acyl-CoA N-acyltransferase AC028_04395 IPR000644 CBS domain AC028_04395 IPR038048 Magnesium transporter MgtE, transmembrane domain AC028_04395 IPR038076 MgtE, N-terminal domain superfamily AC028_04395 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AC028_04395 IPR006667 SLC41 divalent cation transporters, integral membrane domain AC028_04395 IPR006669 Magnesium transporter MgtE AC028_04395 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_04400 IPR036398 Alpha carbonic anhydrase domain superfamily AC028_04400 IPR023561 Carbonic anhydrase, alpha-class AC028_04400 IPR018338 Carbonic anhydrase, alpha-class, conserved site AC028_04400 IPR041891 Carbonic anhydrase, prokaryotic-like AC028_04400 IPR001148 Alpha carbonic anhydrase domain AC028_04405 IPR003148 Regulator of K+ conductance, N-terminal AC028_04405 IPR038770 Sodium/solute symporter superfamily AC028_04405 IPR036291 NAD(P)-binding domain superfamily AC028_04405 IPR020884 Glutathione-regulated potassium-efflux system protein KefB AC028_04405 IPR004771 K+/H+ exchanger AC028_04405 IPR006153 Cation/H+ exchanger AC028_04410 IPR036291 NAD(P)-binding domain superfamily AC028_04410 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AC028_04410 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AC028_04410 IPR019796 Glucose-6-phosphate dehydrogenase, active site AC028_04410 IPR001282 Glucose-6-phosphate dehydrogenase AC028_04415 IPR008928 Six-hairpin glycosidase superfamily AC028_04415 IPR012341 Six-hairpin glycosidase-like superfamily AC028_04415 IPR011613 GH15-like domain AC028_04425 IPR027354 YcgL domain AC028_04425 IPR038068 YcgL-like superfamily AC028_04430 IPR000794 Beta-ketoacyl synthase AC028_04430 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AC028_04430 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_04430 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_04430 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_04430 IPR018201 Beta-ketoacyl synthase, active site AC028_04430 IPR016039 Thiolase-like AC028_04440 IPR029044 Nucleotide-diphospho-sugar transferases AC028_04440 IPR039528 DPM1-like AC028_04440 IPR001173 Glycosyltransferase 2-like AC028_04450 IPR002559 Transposase, IS4-like AC028_04450 IPR008490 Transposase InsH, N-terminal AC028_04455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AC028_04455 IPR036291 NAD(P)-binding domain superfamily AC028_04455 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_04455 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_04495 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AC028_04495 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AC028_04495 IPR029069 HotDog domain superfamily AC028_04500 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AC028_04500 IPR002123 Phospholipid/glycerol acyltransferase AC028_04510 IPR036736 ACP-like superfamily AC028_04510 IPR003231 Acyl carrier protein (ACP) AC028_04510 IPR009081 Phosphopantetheine binding ACP domain AC028_04510 IPR006162 Phosphopantetheine attachment site AC028_04515 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_04515 IPR006905 Flavin-dependent halogenase AC028_04520 IPR035959 RutC-like superfamily AC028_04520 IPR031038 Chorismatase, FkbO/Hyg5 family AC028_04535 IPR011042 Six-bladed beta-propeller, TolB-like AC028_04535 IPR029058 Alpha/Beta hydrolase fold AC028_04535 IPR011659 WD40-like Beta Propeller AC028_04535 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_04550 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily AC028_04550 IPR001260 Coproporphyrinogen III oxidase, aerobic AC028_04550 IPR018375 Coproporphyrinogen III oxidase, conserved site AC028_04555 IPR001098 DNA-directed DNA polymerase, family A, palm domain AC028_04555 IPR019760 DNA-directed DNA polymerase, family A, conserved site AC028_04555 IPR036397 Ribonuclease H superfamily AC028_04555 IPR012337 Ribonuclease H-like superfamily AC028_04555 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AC028_04555 IPR002421 5'-3' exonuclease, N-terminal AC028_04555 IPR018320 DNA polymerase 1 AC028_04555 IPR002298 DNA polymerase A AC028_04555 IPR002562 3'-5' exonuclease domain AC028_04555 IPR008918 Helix-hairpin-helix motif, class 2 AC028_04555 IPR029060 PIN-like domain superfamily AC028_04555 IPR020045 DNA polymerase I-like, H3TH domain AC028_04555 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AC028_04585 IPR008271 Serine/threonine-protein kinase, active site AC028_04585 IPR017441 Protein kinase, ATP binding site AC028_04585 IPR011009 Protein kinase-like domain superfamily AC028_04585 IPR005543 PASTA domain AC028_04585 IPR000719 Protein kinase domain AC028_04590 IPR036457 PPM-type phosphatase domain superfamily AC028_04590 IPR015655 Protein phosphatase 2C family AC028_04590 IPR001932 PPM-type phosphatase domain AC028_04615 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_04615 IPR023210 NADP-dependent oxidoreductase domain AC028_04620 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04620 IPR000847 Transcription regulator HTH, LysR AC028_04620 IPR036390 Winged helix DNA-binding domain superfamily AC028_04620 IPR005119 LysR, substrate-binding AC028_04635 IPR037026 Vgr protein, OB-fold domain superfamily AC028_04635 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AC028_04635 IPR006531 Gp5 N-terminal AC028_04635 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AC028_04650 IPR017441 Protein kinase, ATP binding site AC028_04650 IPR000719 Protein kinase domain AC028_04650 IPR005543 PASTA domain AC028_04650 IPR011009 Protein kinase-like domain superfamily AC028_04650 IPR008271 Serine/threonine-protein kinase, active site AC028_04660 IPR013325 RNA polymerase sigma factor, region 2 AC028_04660 IPR007627 RNA polymerase sigma-70 region 2 AC028_04660 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_04660 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04660 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AC028_04660 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AC028_04660 IPR014284 RNA polymerase sigma-70 like domain AC028_04660 IPR039425 RNA polymerase sigma-70 like AC028_04675 IPR029033 Histidine phosphatase superfamily AC028_04675 IPR000560 Histidine phosphatase superfamily, clade-2 AC028_04675 IPR033379 Histidine acid phosphatase active site AC028_04690 IPR036397 Ribonuclease H superfamily AC028_04690 IPR025948 HTH-like domain AC028_04690 IPR012337 Ribonuclease H-like superfamily AC028_04690 IPR001584 Integrase, catalytic core AC028_04695 IPR002514 Transposase IS3/IS911family AC028_04695 IPR009057 Homeobox-like domain superfamily AC028_04710 IPR001584 Integrase, catalytic core AC028_04710 IPR012337 Ribonuclease H-like superfamily AC028_04710 IPR036397 Ribonuclease H superfamily AC028_04710 IPR025948 HTH-like domain AC028_04715 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04715 IPR002514 Transposase IS3/IS911family AC028_04715 IPR009057 Homeobox-like domain superfamily AC028_04725 IPR013785 Aldolase-type TIM barrel AC028_04725 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AC028_04725 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_04725 IPR019563 Glycosyl-hydrolase 97, catalytic domain AC028_04725 IPR017853 Glycoside hydrolase superfamily AC028_04725 IPR013780 Glycosyl hydrolase, all-beta AC028_04725 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain AC028_04745 IPR012337 Ribonuclease H-like superfamily AC028_04745 IPR025948 HTH-like domain AC028_04745 IPR001584 Integrase, catalytic core AC028_04745 IPR036397 Ribonuclease H superfamily AC028_04750 IPR002514 Transposase IS3/IS911family AC028_04750 IPR009057 Homeobox-like domain superfamily AC028_04755 IPR008490 Transposase InsH, N-terminal AC028_04755 IPR002559 Transposase, IS4-like AC028_04765 IPR036526 Carbon-nitrogen hydrolase superfamily AC028_04765 IPR003010 Carbon-nitrogen hydrolase AC028_04765 IPR014445 Glutamine-dependent NAD(+) synthetase AC028_04765 IPR022310 NAD/GMP synthase AC028_04765 IPR003694 NAD(+) synthetase AC028_04765 IPR000132 Nitrilase/cyanide hydratase, conserved site AC028_04765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_04775 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S AC028_04775 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_04775 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase AC028_04775 IPR013783 Immunoglobulin-like fold AC028_04775 IPR013780 Glycosyl hydrolase, all-beta AC028_04775 IPR017853 Glycoside hydrolase superfamily AC028_04780 IPR017853 Glycoside hydrolase superfamily AC028_04780 IPR012810 Trehalose synthase/alpha-amylase, N-terminal AC028_04780 IPR032091 Maltogenic Amylase, C-terminal AC028_04780 IPR013780 Glycosyl hydrolase, all-beta AC028_04780 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_04785 IPR004193 Glycoside hydrolase, family 13, N-terminal AC028_04785 IPR014756 Immunoglobulin E-set AC028_04785 IPR013783 Immunoglobulin-like fold AC028_04785 IPR017853 Glycoside hydrolase superfamily AC028_04785 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_04785 IPR037439 1,4-alpha-glucan-branching enzyme AC028_04785 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AC028_04785 IPR013780 Glycosyl hydrolase, all-beta AC028_04785 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta AC028_04795 IPR023210 NADP-dependent oxidoreductase domain AC028_04795 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_04800 IPR002018 Carboxylesterase, type B AC028_04800 IPR019826 Carboxylesterase type B, active site AC028_04800 IPR029058 Alpha/Beta hydrolase fold AC028_04805 IPR036514 SGNH hydrolase superfamily AC028_04805 IPR013094 Alpha/beta hydrolase fold-3 AC028_04805 IPR013830 SGNH hydrolase-type esterase domain AC028_04805 IPR029058 Alpha/Beta hydrolase fold AC028_04815 IPR018389 TRAP transporter solute receptor DctP/TeaA AC028_04815 IPR004682 TRAP transporter solute receptor, DctP family AC028_04815 IPR038404 TRAP transporter solute receptor DctP superfamily AC028_04825 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AC028_04825 IPR004681 TRAP transporter large membrane protein DctM AC028_04830 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AC028_04830 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain AC028_04830 IPR006710 Glycoside hydrolase, family 43 AC028_04830 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_04835 IPR023588 Transcription regulator HTH, PurR AC028_04835 IPR000843 LacI-type HTH domain AC028_04835 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_04835 IPR028082 Periplasmic binding protein-like I AC028_04840 IPR021120 KduI/IolB isomerase AC028_04840 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal AC028_04840 IPR007045 5-keto 4-deoxyuronate isomerase AC028_04840 IPR011051 RmlC-like cupin domain superfamily AC028_04840 IPR014710 RmlC-like jelly roll fold AC028_04845 IPR036291 NAD(P)-binding domain superfamily AC028_04845 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_04845 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_04845 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase AC028_04855 IPR001087 GDSL lipase/esterase AC028_04855 IPR036514 SGNH hydrolase superfamily AC028_04855 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like AC028_04865 IPR019774 Aromatic amino acid hydroxylase, C-terminal AC028_04865 IPR005960 Phenylalanine-4-hydroxylase, monomeric form AC028_04865 IPR001273 Aromatic amino acid hydroxylase AC028_04865 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site AC028_04865 IPR036951 Aromatic amino acid hydroxylase superfamily AC028_04865 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AC028_04870 IPR000485 AsnC-type HTH domain AC028_04870 IPR036390 Winged helix DNA-binding domain superfamily AC028_04870 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_04870 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AC028_04870 IPR019888 Transcription regulator AsnC-type AC028_04870 IPR011008 Dimeric alpha-beta barrel AC028_04870 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_04875 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_04875 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_04875 IPR010917 TonB-dependent receptor, conserved site AC028_04875 IPR039423 TonB-dependent receptor-like AC028_04875 IPR012910 TonB-dependent receptor, plug domain AC028_04875 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_04875 IPR010105 TonB-dependent siderophore receptor AC028_04875 IPR011662 Secretin/TonB, short N-terminal domain AC028_04880 IPR001423 Lysophospholipase patatin, conserved site AC028_04880 IPR002641 Patatin-like phospholipase domain AC028_04880 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_04890 IPR003593 AAA+ ATPase domain AC028_04890 IPR003439 ABC transporter-like AC028_04890 IPR017871 ABC transporter, conserved site AC028_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04905 IPR005892 Glycine betaine transport ATP-binding subunit AC028_04905 IPR003439 ABC transporter-like AC028_04905 IPR017871 ABC transporter, conserved site AC028_04905 IPR000644 CBS domain AC028_04905 IPR003593 AAA+ ATPase domain AC028_04910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_04910 IPR035906 MetI-like superfamily AC028_04920 IPR005532 Sulfatase-modifying factor enzyme AC028_04920 IPR032890 Hercynine oxygenase, Actinobacteria AC028_04920 IPR017806 Ergothioneine biosynthesis protein EgtB AC028_04920 IPR034660 DinB/YfiT-like putative metalloenzymes AC028_04920 IPR042095 Sulfatase-modifying factor enzyme superfamily AC028_04920 IPR024775 DinB-like domain AC028_04920 IPR016187 C-type lectin fold AC028_04955 IPR000808 Mrp, conserved site AC028_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_04955 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AC028_04955 IPR034904 Fe-S cluster assembly domain superfamily AC028_04955 IPR002744 MIP18 family-like AC028_04955 IPR019591 Mrp/NBP35 ATP-binding protein AC028_04960 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_04960 IPR029033 Histidine phosphatase superfamily AC028_04970 IPR025202 Phospholipase D-like domain AC028_04970 IPR001736 Phospholipase D/Transphosphatidylase AC028_04975 IPR006683 Thioesterase domain AC028_04975 IPR003736 Phenylacetic acid degradation-related domain AC028_04975 IPR029069 HotDog domain superfamily AC028_05005 IPR013149 Alcohol dehydrogenase, C-terminal AC028_05005 IPR020843 Polyketide synthase, enoylreductase domain AC028_05005 IPR013154 Alcohol dehydrogenase, N-terminal AC028_05005 IPR036291 NAD(P)-binding domain superfamily AC028_05005 IPR011032 GroES-like superfamily AC028_05005 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_05015 IPR003824 Undecaprenyl-diphosphatase UppP AC028_05020 IPR027303 Glutamine synthetase, glycine-rich site AC028_05020 IPR036651 Glutamine synthetase, N-terminal domain superfamily AC028_05020 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AC028_05020 IPR008146 Glutamine synthetase, catalytic domain AC028_05020 IPR004809 Glutamine synthetase type I AC028_05020 IPR008147 Glutamine synthetase, beta-Grasp domain AC028_05020 IPR027302 Glutamine synthetase, N-terminal conserved site AC028_05020 IPR001637 Glutamine synthetase class-I, adenylation site AC028_05025 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_05025 IPR002187 Nitrogen regulatory protein PII AC028_05025 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_05025 IPR017918 Nitrogen regulatory protein PII, conserved site AC028_05025 IPR002332 Nitrogen regulatory protein P-II, urydylation site AC028_05030 IPR024041 Ammonium transporter AmtB-like domain AC028_05030 IPR018047 Ammonium transporter, conserved site AC028_05030 IPR029020 Ammonium/urea transporter AC028_05030 IPR001905 Ammonium transporter AC028_05035 IPR005467 Histidine kinase domain AC028_05035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_05035 IPR003594 Histidine kinase/HSP90-like ATPase AC028_05035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_05035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_05035 IPR035965 PAS domain superfamily AC028_05035 IPR013767 PAS fold AC028_05035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_05035 IPR000014 PAS domain AC028_05040 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_05040 IPR003593 AAA+ ATPase domain AC028_05040 IPR011006 CheY-like superfamily AC028_05040 IPR009057 Homeobox-like domain superfamily AC028_05040 IPR002197 DNA binding HTH domain, Fis-type AC028_05040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_05040 IPR001789 Signal transduction response regulator, receiver domain AC028_05040 IPR025944 Sigma-54 interaction domain, conserved site AC028_05040 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_05040 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_05040 IPR010114 DNA-binding transcriptional regulator NtrC AC028_05045 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily AC028_05045 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone AC028_05045 IPR018152 Superoxide dismutase, copper/zinc, binding site AC028_05045 IPR001424 Superoxide dismutase, copper/zinc binding domain AC028_05050 IPR001424 Superoxide dismutase, copper/zinc binding domain AC028_05050 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily AC028_05050 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone AC028_05050 IPR018152 Superoxide dismutase, copper/zinc, binding site AC028_05055 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_05055 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_05055 IPR022858 Metallothiol transferase FosB AC028_05055 IPR037523 Vicinal oxygen chelate (VOC) domain AC028_05065 IPR020616 Thiolase, N-terminal AC028_05065 IPR012806 Acetyl-CoA C-acyltransferase FadI AC028_05065 IPR002155 Thiolase AC028_05065 IPR016039 Thiolase-like AC028_05065 IPR020610 Thiolase, active site AC028_05065 IPR020617 Thiolase, C-terminal AC028_05065 IPR020613 Thiolase, conserved site AC028_05100 IPR001763 Rhodanese-like domain AC028_05100 IPR036873 Rhodanese-like domain superfamily AC028_05105 IPR003708 Bacterial protein export chaperone SecB AC028_05105 IPR035958 SecB-like superfamily AC028_05110 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_05110 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_05110 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AC028_05110 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AC028_05110 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AC028_05110 IPR036291 NAD(P)-binding domain superfamily AC028_05130 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AC028_05130 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AC028_05130 IPR012000 Thiamine pyrophosphate enzyme, central domain AC028_05130 IPR029061 Thiamin diphosphate-binding fold AC028_05130 IPR000399 TPP-binding enzyme, conserved site AC028_05130 IPR029035 DHS-like NAD/FAD-binding domain superfamily AC028_05135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_05135 IPR009050 Globin-like superfamily AC028_05135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_05135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_05135 IPR005467 Histidine kinase domain AC028_05135 IPR012292 Globin/Protoglobin AC028_05135 IPR003594 Histidine kinase/HSP90-like ATPase AC028_05135 IPR039379 Protoglobin, globin sensor domain AC028_05135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_05140 IPR003593 AAA+ ATPase domain AC028_05140 IPR011006 CheY-like superfamily AC028_05140 IPR009057 Homeobox-like domain superfamily AC028_05140 IPR001789 Signal transduction response regulator, receiver domain AC028_05140 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_05140 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_05140 IPR025944 Sigma-54 interaction domain, conserved site AC028_05140 IPR010114 DNA-binding transcriptional regulator NtrC AC028_05140 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_05140 IPR002197 DNA binding HTH domain, Fis-type AC028_05140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_05155 IPR011701 Major facilitator superfamily AC028_05155 IPR020846 Major facilitator superfamily domain AC028_05155 IPR036259 MFS transporter superfamily AC028_05160 IPR029028 Alpha/beta knot methyltransferases AC028_05160 IPR001537 tRNA/rRNA methyltransferase, SpoU type AC028_05160 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AC028_05160 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_05175 IPR016039 Thiolase-like AC028_05175 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC028_05175 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AC028_05175 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AC028_05180 IPR036597 Fido-like domain superfamily AC028_05180 IPR003812 Fido domain AC028_05180 IPR025758 Fic/DOC N-terminal AC028_05180 IPR040198 Fido domain-containing protein AC028_05180 IPR026287 Protein adenylyltransferase SoFic-like AC028_05185 IPR029058 Alpha/Beta hydrolase fold AC028_05185 IPR000639 Epoxide hydrolase-like AC028_05185 IPR000073 Alpha/beta hydrolase fold-1 AC028_05190 IPR005358 Putative zinc- or iron-chelating domain containing protein AC028_05195 IPR000873 AMP-dependent synthetase/ligase AC028_05195 IPR020845 AMP-binding, conserved site AC028_05195 IPR042099 AMP-dependent synthetase-like superfamily AC028_05205 IPR023650 Beta-lactamase, class-A active site AC028_05205 IPR012338 Beta-lactamase/transpeptidase-like AC028_05205 IPR001466 Beta-lactamase-related AC028_05210 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase AC028_05210 IPR036291 NAD(P)-binding domain superfamily AC028_05235 IPR011009 Protein kinase-like domain superfamily AC028_05235 IPR010232 Probable protein kinase UbiB AC028_05235 IPR004147 UbiB domain AC028_05245 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_05245 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_05245 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AC028_05255 IPR000352 Peptide chain release factor class I AC028_05265 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_05265 IPR000246 Peptidase T2, asparaginase 2 AC028_05270 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_05270 IPR001567 Peptidase M3A/M3B catalytic domain AC028_05275 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_05275 IPR036291 NAD(P)-binding domain superfamily AC028_05275 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_05280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_05280 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D AC028_05280 IPR001279 Metallo-beta-lactamase AC028_05300 IPR018062 HTH domain AraC-type, conserved site AC028_05300 IPR018060 DNA binding HTH domain, AraC-type AC028_05305 IPR038770 Sodium/solute symporter superfamily AC028_05305 IPR006153 Cation/H+ exchanger AC028_05310 IPR005119 LysR, substrate-binding AC028_05310 IPR000847 Transcription regulator HTH, LysR AC028_05310 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05310 IPR036390 Winged helix DNA-binding domain superfamily AC028_05315 IPR019830 Malate synthase, conserved site AC028_05315 IPR011076 Malate synthase-like superfamily AC028_05315 IPR006252 Malate synthase A AC028_05315 IPR001465 Malate synthase AC028_05320 IPR039556 ICL/PEPM domain AC028_05320 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_05320 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AC028_05320 IPR006254 Isocitrate lyase AC028_05320 IPR040442 Pyruvate kinase-like domain superfamily AC028_05325 IPR039435 Diguanylate cyclase DosC, globin sensor domain AC028_05325 IPR029787 Nucleotide cyclase AC028_05325 IPR009050 Globin-like superfamily AC028_05325 IPR000160 GGDEF domain AC028_05325 IPR012292 Globin/Protoglobin AC028_05345 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_05345 IPR011042 Six-bladed beta-propeller, TolB-like AC028_05345 IPR029058 Alpha/Beta hydrolase fold AC028_05350 IPR012337 Ribonuclease H-like superfamily AC028_05350 IPR036397 Ribonuclease H superfamily AC028_05350 IPR025948 HTH-like domain AC028_05350 IPR001584 Integrase, catalytic core AC028_05355 IPR009057 Homeobox-like domain superfamily AC028_05355 IPR002514 Transposase IS3/IS911family AC028_05365 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AC028_05365 IPR001882 Biotin-binding site AC028_05365 IPR011764 Biotin carboxylation domain AC028_05365 IPR011054 Rudiment single hybrid motif AC028_05365 IPR011053 Single hybrid motif AC028_05365 IPR005481 Biotin carboxylase-like, N-terminal domain AC028_05365 IPR000089 Biotin/lipoyl attachment AC028_05365 IPR016185 Pre-ATP-grasp domain superfamily AC028_05365 IPR005482 Biotin carboxylase, C-terminal AC028_05365 IPR011761 ATP-grasp fold AC028_05370 IPR034733 Acetyl-CoA carboxylase AC028_05370 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AC028_05370 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AC028_05370 IPR029045 ClpP/crotonase-like domain superfamily AC028_05375 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_05375 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_05375 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_05375 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_05375 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_05375 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_05375 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_05430 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AC028_05430 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AC028_05430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_05455 IPR030870 Cell division protein ZapE AC028_05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_05455 IPR005654 ATPase, AFG1-like AC028_05460 IPR000835 MarR-type HTH domain AC028_05460 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05460 IPR036390 Winged helix DNA-binding domain superfamily AC028_05465 IPR015946 K homology domain-like, alpha/beta AC028_05465 IPR003718 OsmC/Ohr family AC028_05465 IPR036102 OsmC/Ohr superfamily AC028_05465 IPR019953 Organic hydroperoxide resistance protein famiy AC028_05495 IPR036291 NAD(P)-binding domain superfamily AC028_05495 IPR011032 GroES-like superfamily AC028_05495 IPR041694 Oxidoreductase, N-terminal domain AC028_05495 IPR013149 Alcohol dehydrogenase, C-terminal AC028_05495 IPR020843 Polyketide synthase, enoylreductase domain AC028_05510 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AC028_05510 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AC028_05510 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_05510 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_05510 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AC028_05515 IPR039426 Vitamin B12 transporter BtuB-like AC028_05515 IPR013784 Carbohydrate-binding-like fold AC028_05515 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_05525 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AC028_05525 IPR010225 ATP-dependent helicase HrpB AC028_05525 IPR001650 Helicase, C-terminal AC028_05525 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_05525 IPR007502 Helicase-associated domain AC028_05525 IPR011545 DEAD/DEAH box helicase domain AC028_05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_05530 IPR009921 Domain of unknown function DUF1456 AC028_05535 IPR014306 Hydroxyisourate hydrolase AC028_05535 IPR023418 Transthyretin, thyroxine binding site AC028_05535 IPR023416 Transthyretin/hydroxyisourate hydrolase domain AC028_05535 IPR000895 Transthyretin/hydroxyisourate hydrolase AC028_05535 IPR023419 Transthyretin, conserved site AC028_05535 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily AC028_05540 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_05540 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain AC028_05545 IPR002042 Uricase AC028_05545 IPR019842 Uricase, conserved site AC028_05545 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily AC028_05545 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 AC028_05545 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase AC028_05560 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AC028_05560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_05560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_05560 IPR015424 Pyridoxal phosphate-dependent transferase AC028_05560 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AC028_05560 IPR000192 Aminotransferase class V domain AC028_05565 IPR036264 Bacterial exopeptidase dimerisation domain AC028_05565 IPR002933 Peptidase M20 AC028_05565 IPR011650 Peptidase M20, dimerisation domain AC028_05565 IPR010158 Amidase, carbamoylase-type AC028_05570 IPR036390 Winged helix DNA-binding domain superfamily AC028_05570 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05570 IPR005119 LysR, substrate-binding AC028_05570 IPR000847 Transcription regulator HTH, LysR AC028_05575 IPR023594 Haloalkane dehalogenase, subfamily 2 AC028_05575 IPR000639 Epoxide hydrolase-like AC028_05575 IPR000073 Alpha/beta hydrolase fold-1 AC028_05575 IPR029058 Alpha/Beta hydrolase fold AC028_05585 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_05590 IPR000120 Amidase AC028_05590 IPR036928 Amidase signature (AS) superfamily AC028_05590 IPR014087 1-carboxybiuret hydrolase, AtzE subunit AC028_05590 IPR023631 Amidase signature domain AC028_05595 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site AC028_05595 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_05595 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AC028_05595 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA AC028_05595 IPR036452 Ribonucleoside hydrolase-like AC028_05605 IPR006043 Xanthine/uracil/vitamin C permease AC028_05605 IPR026033 Azaguanine-like transporters AC028_05615 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_05615 IPR017938 Riboflavin synthase-like beta-barrel AC028_05615 IPR000951 Phthalate dioxygenase reductase AC028_05615 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_05615 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_05615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_05615 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AC028_05615 IPR012675 Beta-grasp domain superfamily AC028_05620 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AC028_05620 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AC028_05625 IPR000847 Transcription regulator HTH, LysR AC028_05625 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05625 IPR005119 LysR, substrate-binding AC028_05625 IPR036390 Winged helix DNA-binding domain superfamily AC028_05630 IPR001130 TatD family AC028_05630 IPR032466 Metal-dependent hydrolase AC028_05630 IPR018228 Deoxyribonuclease, TatD-related, conserved site AC028_05630 IPR024918 3'-5' ssDNA/RNA exonuclease TatD AC028_05640 IPR005119 LysR, substrate-binding AC028_05640 IPR036390 Winged helix DNA-binding domain superfamily AC028_05640 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05640 IPR000847 Transcription regulator HTH, LysR AC028_05645 IPR020846 Major facilitator superfamily domain AC028_05645 IPR036259 MFS transporter superfamily AC028_05645 IPR011701 Major facilitator superfamily AC028_05655 IPR000073 Alpha/beta hydrolase fold-1 AC028_05655 IPR000639 Epoxide hydrolase-like AC028_05655 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AC028_05655 IPR029058 Alpha/Beta hydrolase fold AC028_05660 IPR029035 DHS-like NAD/FAD-binding domain superfamily AC028_05660 IPR003000 Sirtuin family AC028_05660 IPR026590 Sirtuin family, catalytic core domain AC028_05660 IPR026591 Sirtuin, catalytic core small domain superfamily AC028_05660 IPR026587 Sirtuin, class II AC028_05665 IPR013785 Aldolase-type TIM barrel AC028_05665 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AC028_05665 IPR023663 NADPH dehydrogenase AC028_05670 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_05670 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AC028_05670 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_05670 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AC028_05670 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AC028_05670 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AC028_05670 IPR036291 NAD(P)-binding domain superfamily AC028_05680 IPR036477 Formyl transferase, N-terminal domain superfamily AC028_05680 IPR002912 ACT domain AC028_05680 IPR002376 Formyl transferase, N-terminal AC028_05680 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AC028_05680 IPR004810 Formyltetrahydrofolate deformylase AC028_05685 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05685 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_05685 IPR039420 Transcriptional regulatory protein WalR-like AC028_05685 IPR011006 CheY-like superfamily AC028_05685 IPR001789 Signal transduction response regulator, receiver domain AC028_05685 IPR016032 Signal transduction response regulator, C-terminal effector AC028_05690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_05690 IPR005467 Histidine kinase domain AC028_05690 IPR003660 HAMP domain AC028_05690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_05690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_05690 IPR003594 Histidine kinase/HSP90-like ATPase AC028_05690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_05695 IPR006143 RND efflux pump, membrane fusion protein AC028_05695 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_05700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_05700 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AC028_05700 IPR001036 Acriflavin resistance protein AC028_05705 IPR012640 Membrane lipoprotein, lipid attachment site AC028_05705 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_05705 IPR003423 Outer membrane efflux protein AC028_05715 IPR029041 FAD-linked oxidoreductase-like AC028_05715 IPR003171 Methylenetetrahydrofolate reductase AC028_05720 IPR003828 Epoxyqueuosine reductase QueH AC028_05725 IPR036390 Winged helix DNA-binding domain superfamily AC028_05725 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05725 IPR000847 Transcription regulator HTH, LysR AC028_05725 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AC028_05725 IPR005119 LysR, substrate-binding AC028_05730 IPR029039 Flavoprotein-like superfamily AC028_05730 IPR019912 FMN reductase, MsuE-like AC028_05730 IPR005025 NADPH-dependent FMN reductase-like AC028_05740 IPR038071 UROD/MetE-like superfamily AC028_05740 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AC028_05740 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AC028_05740 IPR006276 Cobalamin-independent methionine synthase AC028_05745 IPR004684 2-keto-3-deoxygluconate permease AC028_05745 IPR018395 2-keto-3-deoxygluconate permease, subgroup AC028_05765 IPR036291 NAD(P)-binding domain superfamily AC028_05765 IPR008030 NmrA-like domain AC028_05770 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05770 IPR036390 Winged helix DNA-binding domain superfamily AC028_05770 IPR002577 Helix-turn-helix, HxlR type AC028_05805 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AC028_05805 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AC028_05805 IPR042096 Dihydroxy-acid dehydratase, C-terminal AC028_05805 IPR004404 Dihydroxy-acid dehydratase AC028_05805 IPR037237 IlvD/EDD, N-terminal domain AC028_05825 IPR011004 Trimeric LpxA-like superfamily AC028_05825 IPR001451 Hexapeptide repeat AC028_05835 IPR011701 Major facilitator superfamily AC028_05835 IPR020846 Major facilitator superfamily domain AC028_05835 IPR036259 MFS transporter superfamily AC028_05835 IPR005829 Sugar transporter, conserved site AC028_05840 IPR003607 HD/PDEase domain AC028_05840 IPR006674 HD domain AC028_05840 IPR037522 HD-GYP domain AC028_05840 IPR021812 Protein of unknown function DUF3391 AC028_05840 IPR006675 HDIG domain AC028_05855 IPR036291 NAD(P)-binding domain superfamily AC028_05855 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_05860 IPR016161 Aldehyde/histidinol dehydrogenase AC028_05860 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_05860 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_05860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AC028_05860 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_05860 IPR015590 Aldehyde dehydrogenase domain AC028_05870 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_05870 IPR012733 4-hydroxybenzoate 3-monooxygenase AC028_05870 IPR002938 FAD-binding domain AC028_05880 IPR018484 Carbohydrate kinase, FGGY, N-terminal AC028_05880 IPR005999 Glycerol kinase AC028_05880 IPR018483 Carbohydrate kinase, FGGY, conserved site AC028_05880 IPR018485 Carbohydrate kinase, FGGY, C-terminal AC028_05880 IPR000577 Carbohydrate kinase, FGGY AC028_05885 IPR022357 Major intrinsic protein, conserved site AC028_05885 IPR000425 Major intrinsic protein AC028_05885 IPR023271 Aquaporin-like AC028_05890 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AC028_05890 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AC028_05890 IPR006076 FAD dependent oxidoreductase AC028_05890 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_05890 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AC028_05895 IPR036390 Winged helix DNA-binding domain superfamily AC028_05895 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AC028_05895 IPR037171 NagB/RpiA transferase-like AC028_05895 IPR001034 DeoR-type HTH domain AC028_05895 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05895 IPR014036 DeoR C-terminal sensor domain AC028_05905 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AC028_05905 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AC028_05905 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AC028_05910 IPR004165 Coenzyme A transferase family I AC028_05910 IPR037171 NagB/RpiA transferase-like AC028_05915 IPR037171 NagB/RpiA transferase-like AC028_05915 IPR004165 Coenzyme A transferase family I AC028_05920 IPR002155 Thiolase AC028_05920 IPR016039 Thiolase-like AC028_05920 IPR012793 Beta-ketoadipyl CoA thiolase AC028_05920 IPR020615 Thiolase, acyl-enzyme intermediate active site AC028_05920 IPR020617 Thiolase, C-terminal AC028_05920 IPR020613 Thiolase, conserved site AC028_05920 IPR020610 Thiolase, active site AC028_05920 IPR020616 Thiolase, N-terminal AC028_05925 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal AC028_05925 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit AC028_05925 IPR015889 Intradiol ring-cleavage dioxygenase, core AC028_05925 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AC028_05930 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit AC028_05930 IPR015889 Intradiol ring-cleavage dioxygenase, core AC028_05930 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AC028_05935 IPR022761 Fumarate lyase, N-terminal AC028_05935 IPR008948 L-Aspartase-like AC028_05935 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase AC028_05935 IPR024083 Fumarase/histidase, N-terminal AC028_05935 IPR019468 Adenylosuccinate lyase C-terminal AC028_05935 IPR000362 Fumarate lyase family AC028_05935 IPR020557 Fumarate lyase, conserved site AC028_05940 IPR000073 Alpha/beta hydrolase fold-1 AC028_05940 IPR029058 Alpha/Beta hydrolase fold AC028_05940 IPR026968 3-oxoadipate enol-lactonase 1/2 AC028_05940 IPR022742 Serine aminopeptidase, S33 AC028_05945 IPR012788 4-carboxymuconolactone decarboxylase AC028_05945 IPR029032 AhpD-like AC028_05945 IPR003779 Carboxymuconolactone decarboxylase-like AC028_05955 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_05955 IPR005471 Transcription regulator IclR, N-terminal AC028_05955 IPR014757 Transcription regulator IclR, C-terminal AC028_05955 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AC028_05955 IPR029016 GAF-like domain superfamily AC028_05955 IPR036390 Winged helix DNA-binding domain superfamily AC028_05965 IPR029058 Alpha/Beta hydrolase fold AC028_05965 IPR013094 Alpha/beta hydrolase fold-3 AC028_05975 IPR019619 Protein of unknown function DUF2490 AC028_05980 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related AC028_05980 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG AC028_05980 IPR026904 GidA associated domain 3 AC028_05980 IPR020595 MnmG-related, conserved site AC028_05980 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_05990 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_05990 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AC028_05990 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_05990 IPR005789 Threonine dehydratase, catabolic AC028_06010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_06010 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AC028_06010 IPR041698 Methyltransferase domain 25 AC028_06015 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_06015 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_06015 IPR011283 Acetoacetyl-CoA reductase AC028_06015 IPR036291 NAD(P)-binding domain superfamily AC028_06020 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AC028_06020 IPR000073 Alpha/beta hydrolase fold-1 AC028_06020 IPR029058 Alpha/Beta hydrolase fold AC028_06030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_06030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_06030 IPR015424 Pyridoxal phosphate-dependent transferase AC028_06030 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AC028_06030 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AC028_06030 IPR004839 Aminotransferase, class I/classII AC028_06035 IPR013785 Aldolase-type TIM barrel AC028_06035 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AC028_06035 IPR024177 Biotin synthase AC028_06035 IPR006638 Elp3/MiaB/NifB AC028_06035 IPR010722 Biotin and thiamin synthesis-associated domain AC028_06035 IPR007197 Radical SAM AC028_06040 IPR000836 Phosphoribosyltransferase domain AC028_06040 IPR029057 Phosphoribosyltransferase-like AC028_06040 IPR005222 Competence protein ComF AC028_06045 IPR006370 4-hydroxybenzoate polyprenyltransferase-like AC028_06045 IPR039653 Prenyltransferase AC028_06045 IPR000537 UbiA prenyltransferase family AC028_06045 IPR030470 UbiA prenyltransferase conserved site AC028_06075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_06075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_06075 IPR013656 PAS fold-4 AC028_06075 IPR005467 Histidine kinase domain AC028_06075 IPR003594 Histidine kinase/HSP90-like ATPase AC028_06075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_06075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_06075 IPR011006 CheY-like superfamily AC028_06075 IPR035965 PAS domain superfamily AC028_06075 IPR001789 Signal transduction response regulator, receiver domain AC028_06075 IPR000014 PAS domain AC028_06080 IPR002514 Transposase IS3/IS911family AC028_06080 IPR009057 Homeobox-like domain superfamily AC028_06085 IPR001584 Integrase, catalytic core AC028_06085 IPR036397 Ribonuclease H superfamily AC028_06085 IPR025948 HTH-like domain AC028_06085 IPR012337 Ribonuclease H-like superfamily AC028_06100 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_06100 IPR013154 Alcohol dehydrogenase, N-terminal AC028_06100 IPR013149 Alcohol dehydrogenase, C-terminal AC028_06100 IPR001227 Acyl transferase domain superfamily AC028_06100 IPR036291 NAD(P)-binding domain superfamily AC028_06100 IPR011032 GroES-like superfamily AC028_06100 IPR009081 Phosphopantetheine binding ACP domain AC028_06100 IPR042104 Polyketide synthase, dehydratase domain superfamily AC028_06100 IPR016039 Thiolase-like AC028_06100 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_06100 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AC028_06100 IPR032821 Ketoacyl-synthetase, C-terminal extension AC028_06100 IPR013968 Polyketide synthase, ketoreductase domain AC028_06100 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AC028_06100 IPR020843 Polyketide synthase, enoylreductase domain AC028_06100 IPR014043 Acyl transferase AC028_06100 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_06100 IPR018201 Beta-ketoacyl synthase, active site AC028_06100 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_06100 IPR036736 ACP-like superfamily AC028_06100 IPR020807 Polyketide synthase, dehydratase domain AC028_06105 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase AC028_06105 IPR041728 GPAT/DHAPAT, acyltransferase domain AC028_06105 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB AC028_06105 IPR002123 Phospholipid/glycerol acyltransferase AC028_06115 IPR006377 Catabolite control protein A AC028_06115 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_06115 IPR000843 LacI-type HTH domain AC028_06115 IPR028082 Periplasmic binding protein-like I AC028_06135 IPR033856 Flavin-dependent tryptophan halogenase AC028_06135 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_06135 IPR006905 Flavin-dependent halogenase AC028_06140 IPR011060 Ribulose-phosphate binding barrel AC028_06140 IPR001754 Orotidine 5'-phosphate decarboxylase domain AC028_06140 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AC028_06140 IPR014732 Orotidine 5'-phosphate decarboxylase AC028_06140 IPR013785 Aldolase-type TIM barrel AC028_06145 IPR036412 HAD-like superfamily AC028_06145 IPR023214 HAD superfamily AC028_06145 IPR006423 5-nucleotidase lipoprotein e(P4) AC028_06145 IPR005519 Acid phosphatase, class B-like AC028_06150 IPR036390 Winged helix DNA-binding domain superfamily AC028_06150 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_06150 IPR007432 Protein of unknown function DUF480 AC028_06160 IPR000182 GNAT domain AC028_06160 IPR016181 Acyl-CoA N-acyltransferase AC028_06165 IPR014017 UvrD-like DNA helicase, C-terminal AC028_06165 IPR000212 DNA helicase, UvrD/REP type AC028_06165 IPR005752 ATP-dependent DNA helicase Rep AC028_06165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06165 IPR014016 UvrD-like helicase, ATP-binding domain AC028_06165 IPR034739 UvrD/AddA helicase, N-terminal AC028_06165 IPR013986 DExx box DNA helicase domain superfamily AC028_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06170 IPR001267 Thymidine kinase AC028_06175 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_06175 IPR035965 PAS domain superfamily AC028_06175 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_06175 IPR013515 Phytochrome, central region AC028_06175 IPR003018 GAF domain AC028_06175 IPR016132 Phytochrome chromophore attachment domain AC028_06175 IPR029016 GAF-like domain superfamily AC028_06175 IPR003594 Histidine kinase/HSP90-like ATPase AC028_06175 IPR005467 Histidine kinase domain AC028_06175 IPR001294 Phytochrome AC028_06175 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_06175 IPR013654 PAS fold-2 AC028_06180 IPR014438 Glucan biosynthesis protein MdoG/MdoD AC028_06180 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_06180 IPR023724 Glucan biosynthesis, MdoD AC028_06180 IPR011013 Galactose mutarotase-like domain superfamily AC028_06180 IPR013783 Immunoglobulin-like fold AC028_06180 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal AC028_06180 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_06180 IPR014756 Immunoglobulin E-set AC028_06190 IPR010663 Zinc finger, FPG/IleRS-type AC028_06190 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AC028_06190 IPR010979 Ribosomal protein S13-like, H2TH AC028_06190 IPR035937 MutM-like, N-terminal AC028_06190 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AC028_06190 IPR020629 Formamidopyrimidine-DNA glycosylase AC028_06190 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AC028_06190 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AC028_06220 IPR004711 Benzoate transporter AC028_06225 IPR013654 PAS fold-2 AC028_06225 IPR016132 Phytochrome chromophore attachment domain AC028_06225 IPR001294 Phytochrome AC028_06225 IPR013515 Phytochrome, central region AC028_06225 IPR003018 GAF domain AC028_06225 IPR035965 PAS domain superfamily AC028_06225 IPR029016 GAF-like domain superfamily AC028_06225 IPR000014 PAS domain AC028_06230 IPR016053 Haem oxygenase-like AC028_06230 IPR016084 Haem oxygenase-like, multi-helical AC028_06235 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AC028_06235 IPR036259 MFS transporter superfamily AC028_06235 IPR020846 Major facilitator superfamily domain AC028_06235 IPR011701 Major facilitator superfamily AC028_06235 IPR004734 Multidrug resistance protein AC028_06235 IPR005829 Sugar transporter, conserved site AC028_06240 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AC028_06240 IPR011013 Galactose mutarotase-like domain superfamily AC028_06240 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_06240 IPR025532 Glucose-6-phosphate 1-epimerase AC028_06250 IPR023006 Uncharacterised protein family UPF0225 AC028_06250 IPR004027 SEC-C motif AC028_06250 IPR032710 NTF2-like domain superfamily AC028_06255 IPR002781 Transmembrane protein TauE-like AC028_06275 IPR020602 GTP cyclohydrolase I domain AC028_06275 IPR001474 GTP cyclohydrolase I AC028_06275 IPR018234 GTP cyclohydrolase I, conserved site AC028_06285 IPR012451 Protein of unknown function DUF1656 AC028_06290 IPR006143 RND efflux pump, membrane fusion protein AC028_06290 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_06295 IPR003423 Outer membrane efflux protein AC028_06295 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_06300 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AC028_06305 IPR020846 Major facilitator superfamily domain AC028_06305 IPR005828 Major facilitator, sugar transporter-like AC028_06305 IPR036259 MFS transporter superfamily AC028_06305 IPR004736 MFS transporter, metabolite:H symporter AC028_06305 IPR005829 Sugar transporter, conserved site AC028_06315 IPR000847 Transcription regulator HTH, LysR AC028_06315 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_06315 IPR005119 LysR, substrate-binding AC028_06315 IPR036390 Winged helix DNA-binding domain superfamily AC028_06320 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_06320 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_06320 IPR036291 NAD(P)-binding domain superfamily AC028_06330 IPR030874 Cardiolipin synthase, Firmicutes-type AC028_06330 IPR022924 Cardiolipin synthase AC028_06330 IPR027379 Cardiolipin synthase N-terminal AC028_06330 IPR025202 Phospholipase D-like domain AC028_06330 IPR001736 Phospholipase D/Transphosphatidylase AC028_06395 IPR011054 Rudiment single hybrid motif AC028_06395 IPR011764 Biotin carboxylation domain AC028_06395 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AC028_06395 IPR011761 ATP-grasp fold AC028_06395 IPR005481 Biotin carboxylase-like, N-terminal domain AC028_06395 IPR016185 Pre-ATP-grasp domain superfamily AC028_06395 IPR005482 Biotin carboxylase, C-terminal AC028_06420 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_06420 IPR036291 NAD(P)-binding domain superfamily AC028_06450 IPR006344 RecBCD enzyme subunit RecD AC028_06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06450 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain AC028_06450 IPR027785 UvrD-like helicase C-terminal domain AC028_06450 IPR003593 AAA+ ATPase domain AC028_06455 IPR000212 DNA helicase, UvrD/REP type AC028_06455 IPR014017 UvrD-like DNA helicase, C-terminal AC028_06455 IPR011604 Exonuclease, phage-type/RecB, C-terminal AC028_06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06455 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AC028_06455 IPR004586 RecBCD enzyme subunit RecB AC028_06455 IPR011335 Restriction endonuclease type II-like AC028_06455 IPR034739 UvrD/AddA helicase, N-terminal AC028_06455 IPR014016 UvrD-like helicase, ATP-binding domain AC028_06460 IPR011335 Restriction endonuclease type II-like AC028_06460 IPR013986 DExx box DNA helicase domain superfamily AC028_06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06460 IPR006697 RecBCD enzyme subunit RecC AC028_06460 IPR041500 RecC, C-terminal AC028_06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06495 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AC028_06495 IPR017871 ABC transporter, conserved site AC028_06495 IPR003439 ABC transporter-like AC028_06495 IPR003593 AAA+ ATPase domain AC028_06500 IPR030802 ABC transporter permease MalE AC028_06500 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AC028_06505 IPR003399 Mce/MlaD AC028_06505 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD AC028_06510 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AC028_06510 IPR042245 Tgt2/MlaC superfamily AC028_06520 IPR007428 MlaA lipoprotein AC028_06530 IPR033674 Thioredoxin/glutathione peroxidase BtuE AC028_06530 IPR000889 Glutathione peroxidase AC028_06530 IPR029759 Glutathione peroxidase active site AC028_06530 IPR029760 Glutathione peroxidase conserved site AC028_06530 IPR036249 Thioredoxin-like superfamily AC028_06540 IPR003798 DNA recombination RmuC AC028_06550 IPR010987 Glutathione S-transferase, C-terminal-like AC028_06550 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_06550 IPR004045 Glutathione S-transferase, N-terminal AC028_06550 IPR004046 Glutathione S-transferase, C-terminal AC028_06550 IPR036249 Thioredoxin-like superfamily AC028_06560 IPR004758 Amino acid transporter AC028_06560 IPR002293 Amino acid/polyamine transporter I AC028_06575 IPR008599 Putative sugar diacid recognition AC028_06575 IPR041522 CdaR, GGDEF-like domain AC028_06575 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AC028_06575 IPR025736 PucR C-terminal helix-turn-helix domain AC028_06580 IPR036129 Glycerate kinase superfamily AC028_06580 IPR018197 Glycerate kinase, restriction-enzyme-like fold AC028_06580 IPR004381 Glycerate kinase AC028_06580 IPR018193 Glycerate kinase, flavodoxin-like fold AC028_06585 IPR036259 MFS transporter superfamily AC028_06585 IPR020846 Major facilitator superfamily domain AC028_06585 IPR011701 Major facilitator superfamily AC028_06600 IPR002478 PUA domain AC028_06600 IPR036974 PUA domain superfamily AC028_06600 IPR041532 RlmI, PUA-like domain AC028_06600 IPR023542 rRNA large subunit methyltransferase I AC028_06600 IPR019614 S-adenosylmethionine-dependent methyltransferase AC028_06600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_06600 IPR015947 PUA-like superfamily AC028_06605 IPR022369 Integral membrane protein TerC, riboswitch-linked AC028_06605 IPR005496 Integral membrane protein TerC AC028_06610 IPR035952 Rhomboid-like superfamily AC028_06610 IPR022764 Peptidase S54, rhomboid domain AC028_06615 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily AC028_06615 IPR030395 Glycerophosphodiester phosphodiesterase domain AC028_06625 IPR001011 Acid phosphatase, class A, bacterial AC028_06625 IPR018296 Acid phosphatase, class A, bacterial, conserved site AC028_06625 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AC028_06625 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_06630 IPR004520 tRNA modification GTPase MnmE AC028_06630 IPR025867 MnmE, helical domain AC028_06630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06630 IPR005225 Small GTP-binding protein domain AC028_06630 IPR018948 GTP-binding protein TrmE, N-terminal AC028_06630 IPR031168 TrmE-type guanine nucleotide-binding domain AC028_06630 IPR006073 GTP binding domain AC028_06630 IPR027368 tRNA modification GTPase MnmE domain 2 AC028_06630 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AC028_06640 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AC028_06640 IPR028053 Membrane insertase YidC, N-terminal AC028_06640 IPR019998 Membrane insertase YidC AC028_06640 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AC028_06640 IPR038210 Membrane insertase YidC, periplasmic domain AC028_06640 IPR038221 YidC, periplasmic domain superfamily AC028_06645 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_06645 IPR020539 Ribonuclease P, conserved site AC028_06645 IPR000100 Ribonuclease P AC028_06645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_06650 IPR000271 Ribosomal protein L34 AC028_06650 IPR020939 Ribosomal protein L34, conserved site AC028_06655 IPR038454 DnaA, N-terminal domain superfamily AC028_06655 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06655 IPR010921 Trp repressor/replication initiator AC028_06655 IPR024633 DnaA N-terminal domain AC028_06655 IPR013159 Chromosomal replication initiator, DnaA C-terminal AC028_06655 IPR003593 AAA+ ATPase domain AC028_06655 IPR001957 Chromosomal replication control, initiator DnaA AC028_06655 IPR013317 Chromosomal replication initiator protein DnaA AC028_06655 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AC028_06660 IPR001001 DNA polymerase III, beta sliding clamp AC028_06660 IPR022637 DNA polymerase III, beta sliding clamp, central AC028_06660 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AC028_06660 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AC028_06665 IPR001238 DNA-binding, RecF AC028_06665 IPR018078 DNA-binding, RecF, conserved site AC028_06665 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06665 IPR042174 DNA-binding RecF, domain 2 AC028_06665 IPR003395 RecF/RecN/SMC, N-terminal AC028_06670 IPR034160 DNA gyrase subunit B, TOPRIM domain AC028_06670 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AC028_06670 IPR006171 TOPRIM domain AC028_06670 IPR018522 DNA topoisomerase, type IIA, conserved site AC028_06670 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AC028_06670 IPR002288 DNA gyrase B subunit, C-terminal AC028_06670 IPR011557 DNA gyrase, subunit B AC028_06670 IPR041423 DNA gyrase subunit B insert domain AC028_06670 IPR003594 Histidine kinase/HSP90-like ATPase AC028_06670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_06670 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_06670 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AC028_06670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_06670 IPR001241 DNA topoisomerase, type IIA AC028_06680 IPR001915 Peptidase M48 AC028_06690 IPR037682 TonB, C-terminal AC028_06690 IPR006260 TonB/TolA, C-terminal AC028_06695 IPR002898 MotA/TolQ/ExbB proton channel AC028_06700 IPR003400 Biopolymer transport protein ExbD/TolR AC028_06705 IPR003400 Biopolymer transport protein ExbD/TolR AC028_06710 IPR003400 Biopolymer transport protein ExbD/TolR AC028_06715 IPR013785 Aldolase-type TIM barrel AC028_06715 IPR036130 Pyridoxine 5'-phosphate synthase AC028_06715 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AC028_06725 IPR025202 Phospholipase D-like domain AC028_06725 IPR027379 Cardiolipin synthase N-terminal AC028_06725 IPR030874 Cardiolipin synthase, Firmicutes-type AC028_06725 IPR022924 Cardiolipin synthase AC028_06725 IPR001736 Phospholipase D/Transphosphatidylase AC028_06740 IPR006638 Elp3/MiaB/NifB AC028_06740 IPR013785 Aldolase-type TIM barrel AC028_06740 IPR007197 Radical SAM AC028_06740 IPR040086 Protein MJ0683-like AC028_06755 IPR036291 NAD(P)-binding domain superfamily AC028_06755 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_06755 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC028_06755 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AC028_06755 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AC028_06760 IPR005151 Tail specific protease AC028_06760 IPR004447 C-terminal-processing peptidase S41A AC028_06760 IPR036034 PDZ superfamily AC028_06760 IPR029045 ClpP/crotonase-like domain superfamily AC028_06760 IPR001478 PDZ domain AC028_06765 IPR016047 Peptidase M23 AC028_06765 IPR011055 Duplicated hybrid motif AC028_06775 IPR007484 Peptidase M28 AC028_06785 IPR018087 Glycoside hydrolase, family 5, conserved site AC028_06785 IPR017853 Glycoside hydrolase superfamily AC028_06785 IPR001547 Glycoside hydrolase, family 5 AC028_06790 IPR001547 Glycoside hydrolase, family 5 AC028_06790 IPR017853 Glycoside hydrolase superfamily AC028_06790 IPR018087 Glycoside hydrolase, family 5, conserved site AC028_06800 IPR017853 Glycoside hydrolase superfamily AC028_06800 IPR001547 Glycoside hydrolase, family 5 AC028_06800 IPR018087 Glycoside hydrolase, family 5, conserved site AC028_06805 IPR036291 NAD(P)-binding domain superfamily AC028_06805 IPR020843 Polyketide synthase, enoylreductase domain AC028_06805 IPR013149 Alcohol dehydrogenase, C-terminal AC028_06805 IPR011032 GroES-like superfamily AC028_06805 IPR013154 Alcohol dehydrogenase, N-terminal AC028_06805 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_06805 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_06840 IPR000415 Nitroreductase-like AC028_06840 IPR029479 Nitroreductase AC028_06840 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE AC028_06845 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_06845 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AC028_06845 IPR023480 Uncharacterised protein family UPF0312/YceI AC028_06855 IPR033379 Histidine acid phosphatase active site AC028_06855 IPR029033 Histidine phosphatase superfamily AC028_06855 IPR000560 Histidine phosphatase superfamily, clade-2 AC028_06870 IPR037171 NagB/RpiA transferase-like AC028_06870 IPR005777 Acetyl-S-ACP:malonate ACP transferase AC028_06875 IPR009662 Malonate decarboxylase delta subunit AC028_06875 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AC028_06880 IPR034733 Acetyl-CoA carboxylase AC028_06880 IPR029045 ClpP/crotonase-like domain superfamily AC028_06880 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AC028_06880 IPR017556 Biotin-independent malonate decarboxylase, beta subunit AC028_06890 IPR017557 Phosphoribosyl-dephospho-CoA transferase AC028_06895 IPR002736 Triphosphoribosyl-dephospho-CoA protein AC028_06895 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG AC028_06900 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AC028_06900 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_06900 IPR014043 Acyl transferase AC028_06900 IPR001227 Acyl transferase domain superfamily AC028_06910 IPR036390 Winged helix DNA-binding domain superfamily AC028_06910 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_06910 IPR000524 Transcription regulator HTH, GntR AC028_06910 IPR011711 GntR, C-terminal AC028_06910 IPR000485 AsnC-type HTH domain AC028_06910 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_06945 IPR017853 Glycoside hydrolase superfamily AC028_06945 IPR011683 Glycosyl hydrolase family 53 AC028_06950 IPR005474 Transketolase, N-terminal AC028_06950 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AC028_06950 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AC028_06950 IPR004660 Pyruvate dehydrogenase E1 component AC028_06950 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AC028_06950 IPR029061 Thiamin diphosphate-binding fold AC028_06970 IPR042181 Type II secretion system, protein E, N-terminal AC028_06970 IPR007831 General secretory system II, protein E, N-terminal AC028_06970 IPR037257 General secretory system II, protein E, N-terminal superfamily AC028_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_06970 IPR013374 ATPase, type IV, pilus assembly, PilB AC028_06970 IPR001482 Type II/IV secretion system protein AC028_06975 IPR006194 Glycine-tRNA synthetase, heterodimeric AC028_06975 IPR002310 Glycine-tRNA ligase, alpha subunit AC028_06980 IPR015944 Glycine-tRNA ligase, beta subunit AC028_06980 IPR008909 DALR anticodon binding AC028_06980 IPR006194 Glycine-tRNA synthetase, heterodimeric AC028_06990 IPR008490 Transposase InsH, N-terminal AC028_06990 IPR002559 Transposase, IS4-like AC028_07015 IPR025948 HTH-like domain AC028_07015 IPR001584 Integrase, catalytic core AC028_07015 IPR012337 Ribonuclease H-like superfamily AC028_07015 IPR036397 Ribonuclease H superfamily AC028_07020 IPR002514 Transposase IS3/IS911family AC028_07020 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07020 IPR009057 Homeobox-like domain superfamily AC028_07030 IPR002559 Transposase, IS4-like AC028_07030 IPR008490 Transposase InsH, N-terminal AC028_07045 IPR000184 Bacterial surface antigen (D15) AC028_07045 IPR035243 TamA, POTRA domain 1 AC028_07045 IPR039910 Surface antigen D15-like AC028_07050 IPR007452 Translocation and assembly module TamB AC028_07070 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AC028_07070 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_07070 IPR002372 Pyrrolo-quinoline quinone repeat AC028_07070 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_07070 IPR025666 Pyrrolo-quinoline quinone-like domain AC028_07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_07075 IPR006001 Carbohydrate kinase, thermoresistant glucokinase AC028_07080 IPR018043 Sodium:galactoside symporter, conserved site AC028_07080 IPR039672 Lactose permease-like AC028_07080 IPR036259 MFS transporter superfamily AC028_07080 IPR001927 Sodium:galactoside symporter AC028_07085 IPR008928 Six-hairpin glycosidase superfamily AC028_07085 IPR010383 Glycosyl hydrolase 94 AC028_07085 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AC028_07085 IPR012341 Six-hairpin glycosidase-like superfamily AC028_07085 IPR011013 Galactose mutarotase-like domain superfamily AC028_07085 IPR033432 Glycosyl hydrolase 36, catalytic domain AC028_07085 IPR037814 Cellobionic acid phosphorylase, N-terminal AC028_07095 IPR003594 Histidine kinase/HSP90-like ATPase AC028_07095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_07095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_07095 IPR005467 Histidine kinase domain AC028_07095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_07095 IPR000700 PAS-associated, C-terminal AC028_07095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_07100 IPR022929 Putative manganese efflux pump MntP AC028_07100 IPR003810 Putative manganese efflux pump AC028_07105 IPR036390 Winged helix DNA-binding domain superfamily AC028_07105 IPR029016 GAF-like domain superfamily AC028_07105 IPR014757 Transcription regulator IclR, C-terminal AC028_07105 IPR005471 Transcription regulator IclR, N-terminal AC028_07105 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07110 IPR005275 L-fucose permease FucP AC028_07110 IPR011701 Major facilitator superfamily AC028_07110 IPR020846 Major facilitator superfamily domain AC028_07110 IPR036259 MFS transporter superfamily AC028_07115 IPR011008 Dimeric alpha-beta barrel AC028_07115 IPR008000 Rhamnose/fucose mutarotase AC028_07120 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_07120 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_07120 IPR034610 L-fuconate dehydratase AC028_07120 IPR029017 Enolase-like, N-terminal AC028_07120 IPR029065 Enolase C-terminal domain-like AC028_07120 IPR036849 Enolase-like, C-terminal domain superfamily AC028_07125 IPR011234 Fumarylacetoacetase-like, C-terminal AC028_07125 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AC028_07130 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_07130 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_07130 IPR036291 NAD(P)-binding domain superfamily AC028_07140 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_07140 IPR023210 NADP-dependent oxidoreductase domain AC028_07150 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain AC028_07150 IPR006710 Glycoside hydrolase, family 43 AC028_07150 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_07150 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AC028_07175 IPR016032 Signal transduction response regulator, C-terminal effector AC028_07175 IPR001789 Signal transduction response regulator, receiver domain AC028_07175 IPR000792 Transcription regulator LuxR, C-terminal AC028_07175 IPR011006 CheY-like superfamily AC028_07180 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AC028_07180 IPR042099 AMP-dependent synthetase-like superfamily AC028_07180 IPR000873 AMP-dependent synthetase/ligase AC028_07180 IPR020845 AMP-binding, conserved site AC028_07180 IPR011904 Acetate-CoA ligase AC028_07180 IPR025110 AMP-binding enzyme, C-terminal domain AC028_07190 IPR007436 Protein of unknown function DUF485 AC028_07195 IPR014083 Cation/acetate symporter ActP AC028_07195 IPR018212 Sodium/solute symporter, conserved site AC028_07195 IPR001734 Sodium/solute symporter AC028_07195 IPR038377 Sodium/glucose symporter superfamily AC028_07205 IPR027304 Trigger factor/SurA domain superfamily AC028_07205 IPR023034 Peptidyl-prolyl isomerase SurA AC028_07205 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AC028_07205 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AC028_07205 IPR015391 SurA N-terminal AC028_07215 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07215 IPR000600 ROK family AC028_07215 IPR036390 Winged helix DNA-binding domain superfamily AC028_07220 IPR004808 AP endonuclease 1 AC028_07220 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AC028_07220 IPR037493 Exodeoxyribonuclease III-like AC028_07220 IPR005135 Endonuclease/exonuclease/phosphatase AC028_07220 IPR020848 AP endonuclease 1, conserved site AC028_07220 IPR020847 AP endonuclease 1, binding site AC028_07230 IPR007341 Transglycosylase-associated protein AC028_07240 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AC028_07240 IPR004568 Phosphopantetheine-protein transferase domain AC028_07240 IPR008278 4'-phosphopantetheinyl transferase domain AC028_07245 IPR032093 Phospholipase D, N-terminal AC028_07245 IPR018946 Alkaline phosphatase D-related AC028_07245 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_07245 IPR008963 Purple acid phosphatase-like, N-terminal AC028_07245 IPR038607 PhoD-like superfamily AC028_07250 IPR032093 Phospholipase D, N-terminal AC028_07250 IPR038607 PhoD-like superfamily AC028_07250 IPR008963 Purple acid phosphatase-like, N-terminal AC028_07250 IPR018946 Alkaline phosphatase D-related AC028_07255 IPR003682 rRNA small subunit methyltransferase G AC028_07255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_07275 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AC028_07275 IPR006143 RND efflux pump, membrane fusion protein AC028_07275 IPR022824 Multidrug resistance protein MdtA AC028_07280 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA AC028_07280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_07280 IPR001036 Acriflavin resistance protein AC028_07285 IPR037147 Ribosomal protein L28/L24 superfamily AC028_07285 IPR026569 Ribosomal protein L28/L24 AC028_07285 IPR001383 Ribosomal protein L28 AC028_07285 IPR034704 L28p-like AC028_07290 IPR018264 Ribosomal protein L33, conserved site AC028_07290 IPR001705 Ribosomal protein L33 AC028_07290 IPR038584 Ribosomal protein L33 superfamily AC028_07290 IPR011332 Zinc-binding ribosomal protein AC028_07295 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase AC028_07295 IPR032466 Metal-dependent hydrolase AC028_07295 IPR006680 Amidohydrolase-related AC028_07300 IPR007400 PrpF protein AC028_07305 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase AC028_07305 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AC028_07305 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AC028_07310 IPR036390 Winged helix DNA-binding domain superfamily AC028_07310 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain AC028_07310 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07310 IPR000847 Transcription regulator HTH, LysR AC028_07310 IPR005119 LysR, substrate-binding AC028_07315 IPR022924 Cardiolipin synthase AC028_07315 IPR027379 Cardiolipin synthase N-terminal AC028_07315 IPR025202 Phospholipase D-like domain AC028_07315 IPR001736 Phospholipase D/Transphosphatidylase AC028_07315 IPR030874 Cardiolipin synthase, Firmicutes-type AC028_07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_07325 IPR000212 DNA helicase, UvrD/REP type AC028_07325 IPR013986 DExx box DNA helicase domain superfamily AC028_07325 IPR014017 UvrD-like DNA helicase, C-terminal AC028_07325 IPR005753 DNA helicase, ATP-dependent, UvrD type AC028_07325 IPR014016 UvrD-like helicase, ATP-binding domain AC028_07325 IPR034739 UvrD/AddA helicase, N-terminal AC028_07335 IPR001451 Hexapeptide repeat AC028_07335 IPR018357 Hexapeptide transferase, conserved site AC028_07335 IPR024688 Maltose/galactoside acetyltransferase AC028_07335 IPR011004 Trimeric LpxA-like superfamily AC028_07360 IPR008514 Type VI secretion system effector, Hcp AC028_07360 IPR036624 Hcp1-like superfamily AC028_07400 IPR024393 Mechanosensitive ion channel MscS, porin domain AC028_07400 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AC028_07400 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AC028_07400 IPR006686 Mechanosensitive ion channel MscS, conserved site AC028_07400 IPR011066 Mechanosensitive ion channel MscS, C-terminal AC028_07400 IPR023408 Mechanosensitive ion channel MscS domain superfamily AC028_07400 IPR010920 LSM domain superfamily AC028_07400 IPR006685 Mechanosensitive ion channel MscS AC028_07405 IPR000917 Sulfatase, N-terminal AC028_07405 IPR020881 Phosphoglycerol transferase I AC028_07405 IPR017850 Alkaline-phosphatase-like, core domain superfamily AC028_07410 IPR004147 UbiB domain AC028_07410 IPR011009 Protein kinase-like domain superfamily AC028_07410 IPR000719 Protein kinase domain AC028_07415 IPR008526 Inner membrane protein YedI AC028_07420 IPR001789 Signal transduction response regulator, receiver domain AC028_07420 IPR029787 Nucleotide cyclase AC028_07420 IPR000160 GGDEF domain AC028_07420 IPR011006 CheY-like superfamily AC028_07425 IPR013534 Starch synthase, catalytic domain AC028_07425 IPR011835 Bacterial/plant glycogen synthase AC028_07425 IPR001296 Glycosyl transferase, family 1 AC028_07430 IPR013783 Immunoglobulin-like fold AC028_07430 IPR017853 Glycoside hydrolase superfamily AC028_07430 IPR013780 Glycosyl hydrolase, all-beta AC028_07430 IPR004193 Glycoside hydrolase, family 13, N-terminal AC028_07430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_07430 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AC028_07430 IPR037439 1,4-alpha-glucan-branching enzyme AC028_07430 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta AC028_07430 IPR014756 Immunoglobulin E-set AC028_07435 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AC028_07435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_07435 IPR004193 Glycoside hydrolase, family 13, N-terminal AC028_07435 IPR013780 Glycosyl hydrolase, all-beta AC028_07435 IPR017853 Glycoside hydrolase superfamily AC028_07435 IPR014756 Immunoglobulin E-set AC028_07435 IPR013783 Immunoglobulin-like fold AC028_07435 IPR012768 Malto-oligosyltrehalose trehalohydrolase AC028_07440 IPR017853 Glycoside hydrolase superfamily AC028_07440 IPR003385 Glycoside hydrolase, family 77 AC028_07445 IPR017853 Glycoside hydrolase superfamily AC028_07445 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_07445 IPR012767 Maltooligosyl trehalose synthase AC028_07455 IPR017853 Glycoside hydrolase superfamily AC028_07455 IPR014756 Immunoglobulin E-set AC028_07455 IPR013783 Immunoglobulin-like fold AC028_07455 IPR011837 Glycogen debranching enzyme, GlgX type AC028_07455 IPR013780 Glycosyl hydrolase, all-beta AC028_07455 IPR004193 Glycoside hydrolase, family 13, N-terminal AC028_07455 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_07460 IPR036291 NAD(P)-binding domain superfamily AC028_07460 IPR016040 NAD(P)-binding domain AC028_07460 IPR000534 Semialdehyde dehydrogenase, NAD-binding AC028_07465 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_07465 IPR036291 NAD(P)-binding domain superfamily AC028_07465 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_07480 IPR010694 Uncharacterised protein family VirK AC028_07485 IPR003423 Outer membrane efflux protein AC028_07485 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_07500 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AC028_07500 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_07500 IPR001036 Acriflavin resistance protein AC028_07505 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_07505 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_07505 IPR036291 NAD(P)-binding domain superfamily AC028_07515 IPR028622 ATP-dependent RNA helicase RhlE AC028_07515 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_07515 IPR011545 DEAD/DEAH box helicase domain AC028_07515 IPR001650 Helicase, C-terminal AC028_07515 IPR014014 RNA helicase, DEAD-box type, Q motif AC028_07515 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_07520 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AC028_07520 IPR004167 Peripheral subunit-binding domain AC028_07520 IPR000089 Biotin/lipoyl attachment AC028_07520 IPR011053 Single hybrid motif AC028_07520 IPR036625 E3-binding domain superfamily AC028_07520 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AC028_07530 IPR029061 Thiamin diphosphate-binding fold AC028_07530 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AC028_07530 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_07530 IPR033248 Transketolase, C-terminal domain AC028_07535 IPR029061 Thiamin diphosphate-binding fold AC028_07535 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha AC028_07535 IPR001017 Dehydrogenase, E1 component AC028_07545 IPR004981 Tryptophan 2,3-dioxygenase AC028_07545 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like AC028_07550 IPR036259 MFS transporter superfamily AC028_07550 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AC028_07550 IPR005279 Dipeptide/tripeptide permease AC028_07550 IPR000109 Proton-dependent oligopeptide transporter family AC028_07550 IPR020846 Major facilitator superfamily domain AC028_07560 IPR023187 Transcriptional regulator MarR-type, conserved site AC028_07560 IPR036390 Winged helix DNA-binding domain superfamily AC028_07560 IPR000835 MarR-type HTH domain AC028_07560 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07565 IPR005956 4-hydroxyphenylpyruvate dioxygenase AC028_07565 IPR037523 Vicinal oxygen chelate (VOC) domain AC028_07565 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal AC028_07565 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_07565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_07565 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal AC028_07570 IPR011051 RmlC-like cupin domain superfamily AC028_07570 IPR005708 Homogentisate 1,2-dioxygenase AC028_07570 IPR022950 Homogentisate 1,2-dioxygenase, bacterial AC028_07570 IPR014710 RmlC-like jelly roll fold AC028_07585 IPR005133 Na+/H+ antiporter subunit G AC028_07590 IPR007208 Na(+)/H(+) antiporter subunit F-like AC028_07600 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_07600 IPR004775 Na(+)/H(+) antiporter subunit D1 AC028_07605 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AC028_07605 IPR006673 Mnh complex subunit C1 AC028_07610 IPR005281 Monovalent cation:proton antiporter, subunit B AC028_07610 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AC028_07610 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_07610 IPR025383 Domain of unknown function DUF4040 AC028_07610 IPR005663 Monovalent cation proton antiporter subunit A AC028_07610 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AC028_07645 IPR028923 SAICAR synthetase/ADE2, N-terminal AC028_07645 IPR018236 SAICAR synthetase, conserved site AC028_07645 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AC028_07650 IPR029024 TerB-like AC028_07650 IPR036869 Chaperone J-domain superfamily AC028_07650 IPR001623 DnaJ domain AC028_07650 IPR023749 Co-chaperone DjlA AC028_07650 IPR007791 Co-chaperone DjlA, N-terminal AC028_07660 IPR013785 Aldolase-type TIM barrel AC028_07660 IPR026019 Ribulose-phosphate 3-epimerase AC028_07660 IPR000056 Ribulose-phosphate 3-epimerase-like AC028_07660 IPR011060 Ribulose-phosphate binding barrel AC028_07665 IPR000182 GNAT domain AC028_07665 IPR016181 Acyl-CoA N-acyltransferase AC028_07670 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AC028_07670 IPR005218 Diacylglycerol/lipid kinase AC028_07670 IPR001206 Diacylglycerol kinase, catalytic domain AC028_07670 IPR022433 Lipid kinase YegS AC028_07670 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AC028_07675 IPR005256 Anthranilate synthase component I, PabB-like AC028_07675 IPR015890 Chorismate-utilising enzyme, C-terminal AC028_07675 IPR005801 ADC synthase AC028_07675 IPR019999 Anthranilate synthase component I-like AC028_07675 IPR006805 Anthranilate synthase component I, N-terminal AC028_07685 IPR017926 Glutamine amidotransferase AC028_07685 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AC028_07685 IPR029062 Class I glutamine amidotransferase-like AC028_07695 IPR000312 Glycosyl transferase, family 3 AC028_07695 IPR017459 Glycosyl transferase family 3, N-terminal domain AC028_07695 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AC028_07695 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AC028_07695 IPR005940 Anthranilate phosphoribosyl transferase AC028_07700 IPR013798 Indole-3-glycerol phosphate synthase AC028_07700 IPR013785 Aldolase-type TIM barrel AC028_07700 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AC028_07700 IPR011060 Ribulose-phosphate binding barrel AC028_07710 IPR012318 Crp-type HTH domain AC028_07710 IPR000595 Cyclic nucleotide-binding domain AC028_07710 IPR036390 Winged helix DNA-binding domain superfamily AC028_07710 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07710 IPR018335 Transcription regulator HTH, Crp-type, conserved site AC028_07710 IPR014710 RmlC-like jelly roll fold AC028_07710 IPR018490 Cyclic nucleotide-binding-like AC028_07715 IPR016067 S-adenosylmethionine decarboxylase, core AC028_07715 IPR009165 S-adenosylmethionine decarboxylase, bacterial AC028_07715 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AC028_07720 IPR000390 Small multidrug resistance protein family AC028_07725 IPR011566 Ubiquinone biosynthesis protein Coq7 AC028_07725 IPR009078 Ferritin-like superfamily AC028_07725 IPR012347 Ferritin-like AC028_07730 IPR005823 Ribosomal protein L13, bacterial-type AC028_07730 IPR023563 Ribosomal protein L13, conserved site AC028_07730 IPR005822 Ribosomal protein L13 AC028_07730 IPR036899 Ribosomal protein L13 superfamily AC028_07735 IPR000754 Ribosomal protein S9 AC028_07735 IPR023035 Ribosomal protein S9, bacterial/plastid AC028_07735 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_07735 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_07735 IPR020574 Ribosomal protein S9, conserved site AC028_07750 IPR022927 RNA pyrophosphohydrolase RppH AC028_07750 IPR020084 NUDIX hydrolase, conserved site AC028_07750 IPR015797 NUDIX hydrolase-like domain superfamily AC028_07750 IPR000086 NUDIX hydrolase domain AC028_07760 IPR009040 Ferritin-like diiron domain AC028_07760 IPR002024 Bacterioferritin AC028_07760 IPR012347 Ferritin-like AC028_07760 IPR008331 Ferritin/DPS protein domain AC028_07760 IPR009078 Ferritin-like superfamily AC028_07765 IPR011006 CheY-like superfamily AC028_07765 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_07765 IPR001789 Signal transduction response regulator, receiver domain AC028_07765 IPR003660 HAMP domain AC028_07765 IPR036641 HPT domain superfamily AC028_07765 IPR019247 Histidine kinase BarA, N-terminal AC028_07765 IPR003594 Histidine kinase/HSP90-like ATPase AC028_07765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_07765 IPR005467 Histidine kinase domain AC028_07765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_07765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_07765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_07770 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_07770 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_07770 IPR001789 Signal transduction response regulator, receiver domain AC028_07770 IPR011006 CheY-like superfamily AC028_07770 IPR039420 Transcriptional regulatory protein WalR-like AC028_07790 IPR000361 FeS cluster biogenesis AC028_07790 IPR035903 HesB-like domain superfamily AC028_07790 IPR023063 FeS cluster insertion protein ErpA AC028_07790 IPR017870 FeS cluster insertion, C-terminal, conserved site AC028_07790 IPR016092 FeS cluster insertion protein AC028_07800 IPR022925 NADH pyrophosphatase NudC AC028_07800 IPR015375 NADH pyrophosphatase-like, N-terminal AC028_07800 IPR000086 NUDIX hydrolase domain AC028_07800 IPR015376 Zinc ribbon, NADH pyrophosphatase AC028_07800 IPR020084 NUDIX hydrolase, conserved site AC028_07800 IPR015797 NUDIX hydrolase-like domain superfamily AC028_07805 IPR031347 Protein AmpE AC028_07805 IPR004485 Cobalamin biosynthesis CobD/CbiB AC028_07820 IPR036259 MFS transporter superfamily AC028_07820 IPR011701 Major facilitator superfamily AC028_07820 IPR023727 Lysophospholipid transporter LplT AC028_07830 IPR011701 Major facilitator superfamily AC028_07830 IPR036259 MFS transporter superfamily AC028_07830 IPR020846 Major facilitator superfamily domain AC028_07835 IPR032692 Integral membrane protein YccS, N-terminal AC028_07835 IPR010020 Integral membrane protein, YccS/YhfK AC028_07835 IPR010019 Integral membrane protein, YccS AC028_07845 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AC028_07845 IPR016185 Pre-ATP-grasp domain superfamily AC028_07845 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC028_07845 IPR000115 Phosphoribosylglycinamide synthetase AC028_07845 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AC028_07845 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AC028_07845 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AC028_07845 IPR011054 Rudiment single hybrid motif AC028_07845 IPR011761 ATP-grasp fold AC028_07845 IPR013815 ATP-grasp fold, subdomain 1 AC028_07855 IPR024051 AICAR transformylase, duplicated domain superfamily AC028_07855 IPR016193 Cytidine deaminase-like AC028_07855 IPR002695 Bifunctional purine biosynthesis protein PurH-like AC028_07855 IPR011607 Methylglyoxal synthase-like domain AC028_07855 IPR036914 Methylglyoxal synthase-like domain superfamily AC028_07860 IPR000462 CDP-alcohol phosphatidyltransferase AC028_07865 IPR029058 Alpha/Beta hydrolase fold AC028_07865 IPR022744 Methyltransferase domain, putative AC028_07865 IPR022742 Serine aminopeptidase, S33 AC028_07865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_07870 IPR029021 Protein-tyrosine phosphatase-like AC028_07870 IPR016130 Protein-tyrosine phosphatase, active site AC028_07870 IPR020422 Dual specificity protein phosphatase domain AC028_07870 IPR000340 Dual specificity phosphatase, catalytic domain AC028_07870 IPR000387 Tyrosine specific protein phosphatases domain AC028_07870 IPR003595 Protein-tyrosine phosphatase, catalytic AC028_07895 IPR000374 Phosphatidate cytidylyltransferase AC028_07900 IPR002197 DNA binding HTH domain, Fis-type AC028_07900 IPR009057 Homeobox-like domain superfamily AC028_07900 IPR005412 DNA-binding protein Fis AC028_07915 IPR001387 Cro/C1-type helix-turn-helix domain AC028_07915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_07925 IPR004498 Ribosomal protein L11 methyltransferase AC028_07925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_07940 IPR011054 Rudiment single hybrid motif AC028_07940 IPR016185 Pre-ATP-grasp domain superfamily AC028_07940 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AC028_07940 IPR011761 ATP-grasp fold AC028_07940 IPR005482 Biotin carboxylase, C-terminal AC028_07940 IPR011764 Biotin carboxylation domain AC028_07940 IPR013815 ATP-grasp fold, subdomain 1 AC028_07940 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AC028_07940 IPR005481 Biotin carboxylase-like, N-terminal domain AC028_07950 IPR001882 Biotin-binding site AC028_07950 IPR000089 Biotin/lipoyl attachment AC028_07950 IPR011053 Single hybrid motif AC028_07950 IPR001249 Acetyl-CoA biotin carboxyl carrier AC028_07955 IPR036441 Dehydroquinase, class II superfamily AC028_07955 IPR001874 Dehydroquinase, class II AC028_07955 IPR018509 Dehydroquinase, class II, conserved site AC028_07960 IPR013766 Thioredoxin domain AC028_07960 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AC028_07960 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_07960 IPR035671 DsbD gamma AC028_07960 IPR022910 Thiol:disulphide interchange protein DsbD AC028_07960 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AC028_07960 IPR036249 Thioredoxin-like superfamily AC028_07965 IPR004323 Divalent ion tolerance protein, CutA AC028_07965 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_07965 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_07970 IPR007346 Endonuclease I AC028_07975 IPR037124 GroES chaperonin superfamily AC028_07975 IPR011032 GroES-like superfamily AC028_07975 IPR018369 Chaperonin GroES, conserved site AC028_07975 IPR020818 GroES chaperonin family AC028_07980 IPR027409 GroEL-like apical domain superfamily AC028_07980 IPR002423 Chaperonin Cpn60/TCP-1 family AC028_07980 IPR001844 Chaperonin Cpn60 AC028_07980 IPR018370 Chaperonin Cpn60, conserved site AC028_07980 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AC028_07980 IPR027413 GroEL-like equatorial domain superfamily AC028_07990 IPR010917 TonB-dependent receptor, conserved site AC028_07990 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_07990 IPR039426 Vitamin B12 transporter BtuB-like AC028_07990 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_07990 IPR010916 TonB box, conserved site AC028_07990 IPR012910 TonB-dependent receptor, plug domain AC028_07990 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_07990 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_07995 IPR013785 Aldolase-type TIM barrel AC028_07995 IPR006218 DAHP synthetase I/KDSA AC028_07995 IPR006219 DHAP synthase, class 1 AC028_08025 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AC028_08025 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AC028_08025 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AC028_08060 IPR023753 FAD/NAD(P)-binding domain AC028_08060 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AC028_08060 IPR009051 Alpha-helical ferredoxin AC028_08060 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_08060 IPR028261 Dihydroprymidine dehydrogenase domain II AC028_08060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_08065 IPR002932 Glutamate synthase domain AC028_08065 IPR006982 Glutamate synthase, central-N AC028_08065 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AC028_08065 IPR017932 Glutamine amidotransferase type 2 domain AC028_08065 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_08065 IPR002489 Glutamate synthase, alpha subunit, C-terminal AC028_08065 IPR013785 Aldolase-type TIM barrel AC028_08145 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_08145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_08145 IPR011545 DEAD/DEAH box helicase domain AC028_08145 IPR018973 DEAD/DEAH-box helicase, putative AC028_08145 IPR001650 Helicase, C-terminal AC028_08150 IPR004254 AdipoR/Haemolysin-III-related AC028_08150 IPR005744 Hly-III AC028_08165 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_08165 IPR036291 NAD(P)-binding domain superfamily AC028_08165 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_08170 IPR036291 NAD(P)-binding domain superfamily AC028_08170 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_08170 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_08175 IPR036390 Winged helix DNA-binding domain superfamily AC028_08175 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_08175 IPR000847 Transcription regulator HTH, LysR AC028_08175 IPR005119 LysR, substrate-binding AC028_08195 IPR029039 Flavoprotein-like superfamily AC028_08195 IPR003680 Flavodoxin-like fold AC028_08200 IPR002559 Transposase, IS4-like AC028_08200 IPR008490 Transposase InsH, N-terminal AC028_08210 IPR025948 HTH-like domain AC028_08210 IPR001584 Integrase, catalytic core AC028_08210 IPR012337 Ribonuclease H-like superfamily AC028_08210 IPR036397 Ribonuclease H superfamily AC028_08215 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_08215 IPR002514 Transposase IS3/IS911family AC028_08215 IPR009057 Homeobox-like domain superfamily AC028_08245 IPR012337 Ribonuclease H-like superfamily AC028_08245 IPR025948 HTH-like domain AC028_08245 IPR036397 Ribonuclease H superfamily AC028_08245 IPR001584 Integrase, catalytic core AC028_08250 IPR002514 Transposase IS3/IS911family AC028_08250 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_08250 IPR009057 Homeobox-like domain superfamily AC028_08255 IPR009057 Homeobox-like domain superfamily AC028_08255 IPR002514 Transposase IS3/IS911family AC028_08260 IPR036397 Ribonuclease H superfamily AC028_08260 IPR001584 Integrase, catalytic core AC028_08260 IPR025948 HTH-like domain AC028_08260 IPR012337 Ribonuclease H-like superfamily AC028_08270 IPR024072 Dihydrofolate reductase-like domain superfamily AC028_08270 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AC028_08305 IPR036629 YjbJ superfamily AC028_08305 IPR008462 CsbD-like domain AC028_08340 IPR015797 NUDIX hydrolase-like domain superfamily AC028_08340 IPR036412 HAD-like superfamily AC028_08340 IPR000086 NUDIX hydrolase domain AC028_08340 IPR020476 NUDIX hydrolase AC028_08340 IPR006357 HAD-superfamily hydrolase, subfamily IIA AC028_08340 IPR023214 HAD superfamily AC028_08340 IPR020084 NUDIX hydrolase, conserved site AC028_08360 IPR017937 Thioredoxin, conserved site AC028_08360 IPR013766 Thioredoxin domain AC028_08360 IPR036249 Thioredoxin-like superfamily AC028_08360 IPR005746 Thioredoxin AC028_08365 IPR004736 MFS transporter, metabolite:H symporter AC028_08365 IPR015041 Osmosensory transporter coiled coil AC028_08365 IPR036292 Proline/betaine transporter ProP, C-terminal AC028_08365 IPR005829 Sugar transporter, conserved site AC028_08365 IPR036259 MFS transporter superfamily AC028_08365 IPR005828 Major facilitator, sugar transporter-like AC028_08365 IPR020846 Major facilitator superfamily domain AC028_08415 IPR041628 ChlI/MoxR, AAA lid domain AC028_08415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_08415 IPR011703 ATPase, AAA-3 AC028_08440 IPR002559 Transposase, IS4-like AC028_08440 IPR008490 Transposase InsH, N-terminal AC028_08450 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AC028_08450 IPR029056 Ribokinase-like AC028_08450 IPR002139 Ribokinase/fructokinase AC028_08450 IPR011611 Carbohydrate kinase PfkB AC028_08460 IPR010758 Trans-2-enoyl-CoA reductase AC028_08460 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative AC028_08460 IPR024906 Enoyl reductase FAD binding domain AC028_08465 IPR039420 Transcriptional regulatory protein WalR-like AC028_08465 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_08465 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_08465 IPR040970 CadC C-terminal domain 1 AC028_08465 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_08465 IPR016032 Signal transduction response regulator, C-terminal effector AC028_08485 IPR011006 CheY-like superfamily AC028_08485 IPR016032 Signal transduction response regulator, C-terminal effector AC028_08485 IPR001789 Signal transduction response regulator, receiver domain AC028_08485 IPR000792 Transcription regulator LuxR, C-terminal AC028_08490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_08490 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AC028_08500 IPR020920 L-lactate dehydrogenase, bacterial AC028_08500 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AC028_08500 IPR037396 FMN hydroxy acid dehydrogenase domain AC028_08500 IPR000262 FMN-dependent dehydrogenase AC028_08500 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AC028_08500 IPR013785 Aldolase-type TIM barrel AC028_08505 IPR006164 Ku70/Ku80 beta-barrel domain AC028_08505 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AC028_08505 IPR016194 SPOC-like, C-terminal domain superfamily AC028_08525 IPR016161 Aldehyde/histidinol dehydrogenase AC028_08525 IPR015590 Aldehyde dehydrogenase domain AC028_08525 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AC028_08525 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_08525 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_08525 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_08540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_08540 IPR010105 TonB-dependent siderophore receptor AC028_08540 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_08540 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_08540 IPR039426 Vitamin B12 transporter BtuB-like AC028_08540 IPR012910 TonB-dependent receptor, plug domain AC028_08545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_08545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_08545 IPR015424 Pyridoxal phosphate-dependent transferase AC028_08545 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AC028_08545 IPR000796 Aspartate/other aminotransferase AC028_08545 IPR004839 Aminotransferase, class I/classII AC028_08570 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal AC028_08570 IPR028343 Fructose-1,6-bisphosphatase AC028_08570 IPR000146 Fructose-1,6-bisphosphatase class 1 AC028_08580 IPR008490 Transposase InsH, N-terminal AC028_08580 IPR002559 Transposase, IS4-like AC028_08595 IPR025948 HTH-like domain AC028_08595 IPR036397 Ribonuclease H superfamily AC028_08595 IPR012337 Ribonuclease H-like superfamily AC028_08595 IPR001584 Integrase, catalytic core AC028_08600 IPR009057 Homeobox-like domain superfamily AC028_08600 IPR002514 Transposase IS3/IS911family AC028_08610 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_08610 IPR002514 Transposase IS3/IS911family AC028_08610 IPR009057 Homeobox-like domain superfamily AC028_08615 IPR012337 Ribonuclease H-like superfamily AC028_08615 IPR001584 Integrase, catalytic core AC028_08615 IPR025948 HTH-like domain AC028_08615 IPR036397 Ribonuclease H superfamily AC028_08640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_08640 IPR017926 Glutamine amidotransferase AC028_08640 IPR025777 GMP synthetase ATP pyrophosphatase domain AC028_08640 IPR001674 GMP synthase, C-terminal AC028_08640 IPR029062 Class I glutamine amidotransferase-like AC028_08640 IPR004739 GMP synthase, glutamine amidotransferase AC028_08640 IPR022955 GMP synthase AC028_08650 IPR019820 Sec-independent periplasmic protein translocase, conserved site AC028_08650 IPR002033 Sec-independent periplasmic protein translocase TatC AC028_08655 IPR003369 Sec-independent protein translocase protein TatA/B/E AC028_08655 IPR018448 Twin-arginine translocation protein TatB AC028_08660 IPR003369 Sec-independent protein translocase protein TatA/B/E AC028_08660 IPR006312 Sec-independent protein translocase protein TatA/E AC028_08670 IPR001015 Ferrochelatase AC028_08670 IPR019772 Ferrochelatase, active site AC028_08670 IPR033644 Ferrochelatase, C-terminal AC028_08670 IPR033659 Ferrochelatase, N-terminal AC028_08675 IPR000639 Epoxide hydrolase-like AC028_08675 IPR029058 Alpha/Beta hydrolase fold AC028_08675 IPR000073 Alpha/beta hydrolase fold-1 AC028_08690 IPR007476 Putative exonuclease, RdgC AC028_08695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_08695 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase AC028_08695 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AC028_08695 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AC028_08700 IPR036237 Xylose isomerase-like superfamily AC028_08700 IPR013452 Xylose isomerase, bacterial-type AC028_08700 IPR001998 Xylose isomerase AC028_08705 IPR006377 Catabolite control protein A AC028_08705 IPR000843 LacI-type HTH domain AC028_08705 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_08705 IPR028082 Periplasmic binding protein-like I AC028_08710 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily AC028_08710 IPR011100 Glycosyl hydrolase family 67, catalytic domain AC028_08710 IPR017853 Glycoside hydrolase superfamily AC028_08710 IPR029018 Beta-hexosaminidase-like, domain 2 AC028_08710 IPR011395 Alpha glucuronidase AC028_08710 IPR005154 Alpha glucuronidase, N-terminal AC028_08710 IPR011099 Glycosyl hydrolase family 67, C-terminal AC028_08720 IPR029017 Enolase-like, N-terminal AC028_08720 IPR034589 D-mannonate dehydratase-like AC028_08720 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_08720 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_08720 IPR036849 Enolase-like, C-terminal domain superfamily AC028_08720 IPR034593 Mandelate racemase-like AC028_08720 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AC028_08720 IPR029065 Enolase C-terminal domain-like AC028_08725 IPR006710 Glycoside hydrolase, family 43 AC028_08725 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain AC028_08725 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AC028_08725 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_08735 IPR008490 Transposase InsH, N-terminal AC028_08735 IPR002559 Transposase, IS4-like AC028_08745 IPR023027 Mannitol dehydrogenase, conserved site AC028_08745 IPR013131 Mannitol dehydrogenase, N-terminal AC028_08745 IPR013118 Mannitol dehydrogenase, C-terminal AC028_08745 IPR000669 Mannitol dehydrogenase AC028_08745 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_08745 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_08745 IPR036291 NAD(P)-binding domain superfamily AC028_08775 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AC028_08775 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_08775 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_08775 IPR015590 Aldehyde dehydrogenase domain AC028_08775 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_08775 IPR016161 Aldehyde/histidinol dehydrogenase AC028_08775 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AC028_08790 IPR005814 Aminotransferase class-III AC028_08790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_08790 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AC028_08790 IPR015424 Pyridoxal phosphate-dependent transferase AC028_08790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_08800 IPR006000 Xylulokinase AC028_08800 IPR018483 Carbohydrate kinase, FGGY, conserved site AC028_08800 IPR000577 Carbohydrate kinase, FGGY AC028_08800 IPR018484 Carbohydrate kinase, FGGY, N-terminal AC028_08800 IPR018485 Carbohydrate kinase, FGGY, C-terminal AC028_08815 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_08815 IPR011042 Six-bladed beta-propeller, TolB-like AC028_08815 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_08815 IPR005511 Senescence marker protein-30 (SMP-30) AC028_08820 IPR001000 Glycoside hydrolase family 10 domain AC028_08820 IPR031158 Glycosyl hydrolases family 10, active site AC028_08820 IPR017853 Glycoside hydrolase superfamily AC028_08825 IPR013783 Immunoglobulin-like fold AC028_08825 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AC028_08825 IPR006103 Glycoside hydrolase family 2, catalytic domain AC028_08825 IPR023232 Glycoside hydrolase, family 2, active site AC028_08825 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AC028_08825 IPR006101 Glycoside hydrolase, family 2 AC028_08825 IPR008964 Invasin/intimin cell-adhesion fragments AC028_08825 IPR008979 Galactose-binding-like domain superfamily AC028_08825 IPR032311 Domain of unknown function DUF4982 AC028_08825 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AC028_08825 IPR017853 Glycoside hydrolase superfamily AC028_08825 IPR040605 Glycoside hydrolase family 2, domain 5 AC028_08830 IPR032466 Metal-dependent hydrolase AC028_08830 IPR003766 Uronate isomerase AC028_08850 IPR012291 CBM2, carbohydrate-binding domain superfamily AC028_08850 IPR001919 Carbohydrate-binding type-2 domain AC028_08850 IPR018366 Carbohydrate-binding type-2, conserved site AC028_08850 IPR005084 Carbohydrate binding module family 6 AC028_08850 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AC028_08850 IPR017853 Glycoside hydrolase superfamily AC028_08850 IPR031158 Glycosyl hydrolases family 10, active site AC028_08850 IPR001000 Glycoside hydrolase family 10 domain AC028_08850 IPR008979 Galactose-binding-like domain superfamily AC028_08865 IPR018043 Sodium:galactoside symporter, conserved site AC028_08865 IPR039672 Lactose permease-like AC028_08865 IPR036259 MFS transporter superfamily AC028_08865 IPR001927 Sodium:galactoside symporter AC028_08870 IPR006710 Glycoside hydrolase, family 43 AC028_08870 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_08915 IPR002514 Transposase IS3/IS911family AC028_08915 IPR009057 Homeobox-like domain superfamily AC028_08920 IPR036397 Ribonuclease H superfamily AC028_08920 IPR025948 HTH-like domain AC028_08920 IPR001584 Integrase, catalytic core AC028_08920 IPR012337 Ribonuclease H-like superfamily AC028_08940 IPR008718 NolX AC028_08950 IPR004898 Pectate lyase PlyH/PlyE-like AC028_08950 IPR011050 Pectin lyase fold/virulence factor AC028_08950 IPR012334 Pectin lyase fold AC028_08980 IPR006305 Flagellar biosynthesis protein FliQ AC028_08980 IPR002191 Bacterial export protein family 3 AC028_08985 IPR005838 Type III secretion system inner membrane P protein AC028_08985 IPR005773 Yop virulence translocation protein R AC028_09000 IPR042194 FHIPEP, domain 1 AC028_09000 IPR042193 FHIPEP, domain 3 AC028_09000 IPR025505 FHIPEP conserved site AC028_09000 IPR001712 Type III secretion system FHIPEP AC028_09000 IPR042196 FHIPEP, domain 4 AC028_09005 IPR006307 Type III exporter system, secretion apparatus protein BsaZ AC028_09005 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_09005 IPR006135 Type III secretion system substrate exporter AC028_09020 IPR006182 Secretory protein YscJ/FliF AC028_09020 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ AC028_09035 IPR003593 AAA+ ATPase domain AC028_09035 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AC028_09035 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AC028_09035 IPR040627 T3SS EscN ATPase, C-terminal AC028_09035 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AC028_09035 IPR005714 ATPase, type III secretion system, FliI/YscN AC028_09035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09035 IPR013380 ATPase, type III secretion system, H+-transporting AC028_09045 IPR006304 Type III secretion protein SpaR/YscT AC028_09045 IPR002010 Type III secretion system inner membrane R protein AC028_09060 IPR008258 Transglycosylase SLT domain 1 AC028_09060 IPR023346 Lysozyme-like domain superfamily AC028_09085 IPR004176 Clp, N-terminal AC028_09085 IPR036628 Clp, N-terminal domain superfamily AC028_09085 IPR019489 Clp ATPase, C-terminal AC028_09085 IPR003593 AAA+ ATPase domain AC028_09085 IPR003959 ATPase, AAA-type, core AC028_09085 IPR018368 ClpA/B, conserved site 1 AC028_09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09085 IPR017729 Type VI secretion system, ATPase ClpV1 AC028_09085 IPR041546 ClpA/ClpB, AAA lid domain AC028_09085 IPR001270 ClpA/B family AC028_09095 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_09095 IPR036291 NAD(P)-binding domain superfamily AC028_09095 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_09110 IPR036291 NAD(P)-binding domain superfamily AC028_09110 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_09110 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_09120 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_09120 IPR036249 Thioredoxin-like superfamily AC028_09120 IPR016639 Glutathione S-transferase Omega/GSH AC028_09120 IPR004045 Glutathione S-transferase, N-terminal AC028_09120 IPR040079 Glutathione Transferase family AC028_09120 IPR010987 Glutathione S-transferase, C-terminal-like AC028_09155 IPR002469 Dipeptidylpeptidase IV, N-terminal domain AC028_09155 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_09155 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AC028_09155 IPR029058 Alpha/Beta hydrolase fold AC028_09165 IPR011673 Protein of unknown function DUF1615 AC028_09170 IPR029787 Nucleotide cyclase AC028_09170 IPR000160 GGDEF domain AC028_09170 IPR007894 MASE2 AC028_09190 IPR000620 EamA domain AC028_09210 IPR004841 Amino acid permease/ SLC12A domain AC028_09210 IPR004840 Amino acid permease, conserved site AC028_09220 IPR004488 Magnesium/cobalt transport protein CorA AC028_09220 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AC028_09230 IPR001661 Glycoside hydrolase, family 37 AC028_09230 IPR012341 Six-hairpin glycosidase-like superfamily AC028_09230 IPR008928 Six-hairpin glycosidase superfamily AC028_09230 IPR023720 Trehalase, periplasmic AC028_09230 IPR018232 Glycoside hydrolase, family 37, conserved site AC028_09240 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AC028_09240 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AC028_09240 IPR035937 MutM-like, N-terminal AC028_09240 IPR010979 Ribosomal protein S13-like, H2TH AC028_09240 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AC028_09240 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AC028_09260 IPR035919 EAL domain superfamily AC028_09260 IPR001633 EAL domain AC028_09260 IPR000160 GGDEF domain AC028_09260 IPR029787 Nucleotide cyclase AC028_09260 IPR005330 MHYT domain AC028_09265 IPR004090 Chemotaxis methyl-accepting receptor AC028_09265 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_09265 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_09265 IPR003660 HAMP domain AC028_09265 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_09265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_09270 IPR001919 Carbohydrate-binding type-2 domain AC028_09270 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AC028_09270 IPR001547 Glycoside hydrolase, family 5 AC028_09270 IPR012291 CBM2, carbohydrate-binding domain superfamily AC028_09270 IPR017853 Glycoside hydrolase superfamily AC028_09270 IPR018087 Glycoside hydrolase, family 5, conserved site AC028_09275 IPR001902 SLC26A/SulP transporter AC028_09275 IPR018045 Sulphate anion transporter, conserved site AC028_09275 IPR011547 SLC26A/SulP transporter domain AC028_09275 IPR036513 STAS domain superfamily AC028_09275 IPR002645 STAS domain AC028_09280 IPR035965 PAS domain superfamily AC028_09280 IPR000700 PAS-associated, C-terminal AC028_09280 IPR000014 PAS domain AC028_09280 IPR000160 GGDEF domain AC028_09280 IPR013656 PAS fold-4 AC028_09280 IPR029787 Nucleotide cyclase AC028_09290 IPR023725 Glucan biosynthesis glucosyltransferase H AC028_09290 IPR001173 Glycosyltransferase 2-like AC028_09290 IPR029044 Nucleotide-diphospho-sugar transferases AC028_09300 IPR003018 GAF domain AC028_09300 IPR010559 Signal transduction histidine kinase, internal region AC028_09300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_09300 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AC028_09305 IPR001789 Signal transduction response regulator, receiver domain AC028_09305 IPR007492 LytTR DNA-binding domain AC028_09305 IPR011006 CheY-like superfamily AC028_09310 IPR022418 Porphobilinogen deaminase, C-terminal AC028_09310 IPR022417 Porphobilinogen deaminase, N-terminal AC028_09310 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AC028_09310 IPR000860 Porphobilinogen deaminase AC028_09310 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AC028_09335 IPR029058 Alpha/Beta hydrolase fold AC028_09335 IPR023302 Peptidase S9A, N-terminal domain AC028_09335 IPR002470 Peptidase S9A, prolyl oligopeptidase AC028_09335 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_09340 IPR004839 Aminotransferase, class I/classII AC028_09340 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AC028_09340 IPR015424 Pyridoxal phosphate-dependent transferase AC028_09340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_09340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_09345 IPR023302 Peptidase S9A, N-terminal domain AC028_09345 IPR029058 Alpha/Beta hydrolase fold AC028_09345 IPR002470 Peptidase S9A, prolyl oligopeptidase AC028_09345 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_09350 IPR007401 Protein of unknown function DUF454 AC028_09360 IPR001653 Diaminopimelate epimerase, DapF AC028_09360 IPR018510 Diaminopimelate epimerase, active site AC028_09370 IPR004107 Integrase, SAM-like, N-terminal AC028_09370 IPR023009 Tyrosine recombinase XerC/XerD AC028_09370 IPR010998 Integrase/recombinase, N-terminal AC028_09370 IPR002104 Integrase, catalytic domain AC028_09370 IPR011931 Tyrosine recombinase XerC AC028_09370 IPR011010 DNA breaking-rejoining enzyme, catalytic core AC028_09370 IPR013762 Integrase-like, catalytic domain superfamily AC028_09375 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_09375 IPR023333 Proteasome B-type subunit AC028_09375 IPR001353 Proteasome, subunit alpha/beta AC028_09375 IPR022281 ATP-dependent protease, HslV subunit AC028_09380 IPR003959 ATPase, AAA-type, core AC028_09380 IPR004491 Heat shock protein HslU AC028_09380 IPR003593 AAA+ ATPase domain AC028_09380 IPR019489 Clp ATPase, C-terminal AC028_09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09390 IPR000182 GNAT domain AC028_09390 IPR016181 Acyl-CoA N-acyltransferase AC028_09395 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AC028_09405 IPR004033 UbiE/COQ5 methyltransferase AC028_09405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_09405 IPR023576 UbiE/COQ5 methyltransferase, conserved site AC028_09410 IPR029787 Nucleotide cyclase AC028_09410 IPR005330 MHYT domain AC028_09410 IPR001633 EAL domain AC028_09410 IPR035919 EAL domain superfamily AC028_09410 IPR035965 PAS domain superfamily AC028_09410 IPR000160 GGDEF domain AC028_09415 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AC028_09415 IPR014782 Peptidase M1, membrane alanine aminopeptidase AC028_09415 IPR042097 Aminopeptidase N-like , N-terminal AC028_09415 IPR024571 ERAP1-like C-terminal domain AC028_09415 IPR034016 Aminopeptidase N-type AC028_09430 IPR002372 Pyrrolo-quinoline quinone repeat AC028_09430 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_09430 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_09430 IPR001479 Quinoprotein dehydrogenase, conserved site AC028_09430 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family AC028_09435 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AC028_09435 IPR022455 Methanol oxidation system protein MoxJ AC028_09450 IPR020843 Polyketide synthase, enoylreductase domain AC028_09450 IPR036291 NAD(P)-binding domain superfamily AC028_09450 IPR011032 GroES-like superfamily AC028_09450 IPR014183 Alcohol dehydrogenase class III AC028_09450 IPR013149 Alcohol dehydrogenase, C-terminal AC028_09450 IPR013154 Alcohol dehydrogenase, N-terminal AC028_09450 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_09460 IPR029016 GAF-like domain superfamily AC028_09460 IPR009057 Homeobox-like domain superfamily AC028_09460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09460 IPR025944 Sigma-54 interaction domain, conserved site AC028_09460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_09460 IPR003593 AAA+ ATPase domain AC028_09460 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_09460 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_09460 IPR003018 GAF domain AC028_09460 IPR002197 DNA binding HTH domain, Fis-type AC028_09465 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AC028_09465 IPR011611 Carbohydrate kinase PfkB AC028_09465 IPR029056 Ribokinase-like AC028_09470 IPR004753 Cell shape determining protein MreB AC028_09475 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 AC028_09475 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 AC028_09475 IPR007221 Rod shape-determining protein MreC AC028_09485 IPR012338 Beta-lactamase/transpeptidase-like AC028_09485 IPR017790 Penicillin-binding protein 2 AC028_09485 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AC028_09485 IPR001460 Penicillin-binding protein, transpeptidase AC028_09485 IPR005311 Penicillin-binding protein, dimerisation domain AC028_09490 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB AC028_09490 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AC028_09490 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AC028_09495 IPR000743 Glycoside hydrolase, family 28 AC028_09495 IPR011050 Pectin lyase fold/virulence factor AC028_09495 IPR012334 Pectin lyase fold AC028_09500 IPR023346 Lysozyme-like domain superfamily AC028_09500 IPR011757 Lytic transglycosylase MltB AC028_09500 IPR031304 Transglycosylase SLT domain 2 AC028_09505 IPR036908 RlpA-like domain superfamily AC028_09505 IPR009009 RlpA-like protein, double-psi beta-barrel domain AC028_09505 IPR012997 Rare lipoprotein A AC028_09505 IPR036680 Sporulation-like domain superfamily AC028_09505 IPR007730 Sporulation-like domain AC028_09505 IPR034718 Endolytic peptidoglycan transglycosylase RlpA AC028_09510 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AC028_09510 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AC028_09510 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AC028_09510 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AC028_09510 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AC028_09510 IPR012338 Beta-lactamase/transpeptidase-like AC028_09520 IPR027471 YbeD-like domain superfamily AC028_09520 IPR007454 Uncharacterised protein family UPF0250 AC028_09525 IPR000544 Octanoyltransferase AC028_09525 IPR020605 Octanoyltransferase, conserved site AC028_09525 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AC028_09530 IPR007197 Radical SAM AC028_09530 IPR006638 Elp3/MiaB/NifB AC028_09530 IPR031691 Lipoyl synthase, N-terminal AC028_09530 IPR003698 Lipoyl synthase AC028_09530 IPR013785 Aldolase-type TIM barrel AC028_09535 IPR005151 Tail specific protease AC028_09535 IPR001478 PDZ domain AC028_09535 IPR036034 PDZ superfamily AC028_09535 IPR020992 Tail specific protease, C-terminal AC028_09535 IPR004447 C-terminal-processing peptidase S41A AC028_09535 IPR040573 Tail specific protease, N-terminal domain AC028_09535 IPR029045 ClpP/crotonase-like domain superfamily AC028_09545 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_09545 IPR000847 Transcription regulator HTH, LysR AC028_09545 IPR005119 LysR, substrate-binding AC028_09545 IPR036390 Winged helix DNA-binding domain superfamily AC028_09555 IPR015797 NUDIX hydrolase-like domain superfamily AC028_09555 IPR020084 NUDIX hydrolase, conserved site AC028_09555 IPR004821 Cytidyltransferase-like domain AC028_09555 IPR000086 NUDIX hydrolase domain AC028_09555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_09555 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain AC028_09590 IPR006183 6-phosphogluconate dehydrogenase AC028_09590 IPR036291 NAD(P)-binding domain superfamily AC028_09590 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AC028_09590 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_09590 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_09590 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AC028_09590 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type AC028_09600 IPR007055 BON domain AC028_09600 IPR014004 Transport-associated and nodulation domain, bacteria AC028_09605 IPR013654 PAS fold-2 AC028_09605 IPR035965 PAS domain superfamily AC028_09605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_09605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_09605 IPR005467 Histidine kinase domain AC028_09605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_09605 IPR003594 Histidine kinase/HSP90-like ATPase AC028_09605 IPR029016 GAF-like domain superfamily AC028_09605 IPR003018 GAF domain AC028_09605 IPR016132 Phytochrome chromophore attachment domain AC028_09605 IPR001294 Phytochrome AC028_09605 IPR013515 Phytochrome, central region AC028_09610 IPR011006 CheY-like superfamily AC028_09610 IPR001789 Signal transduction response regulator, receiver domain AC028_09615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_09615 IPR003594 Histidine kinase/HSP90-like ATPase AC028_09615 IPR005467 Histidine kinase domain AC028_09615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_09615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_09615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_09615 IPR029151 Periplasmic sensor-like domain superfamily AC028_09620 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AC028_09620 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AC028_09625 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_09625 IPR036291 NAD(P)-binding domain superfamily AC028_09625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AC028_09625 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_09665 IPR013356 Type II secretion system GspD AC028_09665 IPR038591 NolW-like superfamily AC028_09665 IPR004846 Type II/III secretion system AC028_09665 IPR005644 NolW-like AC028_09665 IPR001775 GspD/PilQ family AC028_09665 IPR004845 Type II secretion system GspD, conserved site AC028_09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09670 IPR001482 Type II/IV secretion system protein AC028_09670 IPR013369 Type II secretion system GspE AC028_09670 IPR042181 Type II secretion system, protein E, N-terminal AC028_09670 IPR037257 General secretory system II, protein E, N-terminal superfamily AC028_09675 IPR042094 Type II secretion system F domain superfamily AC028_09675 IPR001992 Type II secretion system conserved site AC028_09675 IPR011850 General secretion pathway protein F AC028_09675 IPR003004 GspF/PilC family AC028_09675 IPR018076 Type II secretion system F domain AC028_09680 IPR010054 General secretion pathway protein G AC028_09680 IPR013545 Type II secretion system protein G AC028_09680 IPR012902 Prokaryotic N-terminal methylation site AC028_09680 IPR000983 Bacterial general secretion pathway protein G-type pilin AC028_09685 IPR012902 Prokaryotic N-terminal methylation site AC028_09685 IPR022346 General secretion pathway, GspH AC028_09685 IPR002416 Type II secretion system protein H AC028_09690 IPR010052 Type II secretion system protein I AC028_09690 IPR003413 Type II secretion system protein I domain AC028_09690 IPR012902 Prokaryotic N-terminal methylation site AC028_09695 IPR010055 Type II secretion system protein J AC028_09695 IPR012902 Prokaryotic N-terminal methylation site AC028_09700 IPR038072 GspK, central domain superfamily AC028_09700 IPR005628 General secretion pathway protein K AC028_09725 IPR032311 Domain of unknown function DUF4982 AC028_09725 IPR008979 Galactose-binding-like domain superfamily AC028_09725 IPR040605 Glycoside hydrolase family 2, domain 5 AC028_09725 IPR017853 Glycoside hydrolase superfamily AC028_09725 IPR013783 Immunoglobulin-like fold AC028_09725 IPR023232 Glycoside hydrolase, family 2, active site AC028_09725 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AC028_09725 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AC028_09725 IPR006103 Glycoside hydrolase family 2, catalytic domain AC028_09725 IPR006101 Glycoside hydrolase, family 2 AC028_09725 IPR008964 Invasin/intimin cell-adhesion fragments AC028_09725 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AC028_09745 IPR005964 Bacterial glucose/galactose transporter AC028_09745 IPR036259 MFS transporter superfamily AC028_09745 IPR011701 Major facilitator superfamily AC028_09750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_09750 IPR000843 LacI-type HTH domain AC028_09750 IPR028082 Periplasmic binding protein-like I AC028_09755 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AC028_09755 IPR035466 GlmS/AgaS, SIS domain 1 AC028_09755 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_09755 IPR001347 Sugar isomerase (SIS) AC028_09755 IPR035490 GlmS/FrlB, SIS domain 2 AC028_09755 IPR017932 Glutamine amidotransferase type 2 domain AC028_09760 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_09760 IPR003764 N-acetylglucosamine-6-phosphate deacetylase AC028_09760 IPR032466 Metal-dependent hydrolase AC028_09760 IPR006680 Amidohydrolase-related AC028_09775 IPR006674 HD domain AC028_09775 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AC028_09775 IPR002646 Poly A polymerase, head domain AC028_09775 IPR003607 HD/PDEase domain AC028_09775 IPR012006 tRNA nucleotidyltransferase, proteobacteria AC028_09780 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AC028_09780 IPR012132 Glucose-methanol-choline oxidoreductase AC028_09780 IPR027424 Glucose Oxidase, domain 2 AC028_09780 IPR011533 Oxygen-dependent choline dehydrogenase AC028_09780 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AC028_09780 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_09785 IPR015590 Aldehyde dehydrogenase domain AC028_09785 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_09785 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AC028_09785 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_09785 IPR011264 Betaine aldehyde dehydrogenase AC028_09785 IPR016161 Aldehyde/histidinol dehydrogenase AC028_09785 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_09790 IPR000060 BCCT transporter family AC028_09790 IPR018093 BCCT transporter, conserved site AC028_09800 IPR001853 DSBA-like thioredoxin domain AC028_09800 IPR017937 Thioredoxin, conserved site AC028_09800 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AC028_09800 IPR036249 Thioredoxin-like superfamily AC028_09800 IPR013766 Thioredoxin domain AC028_09810 IPR024167 Cytochrome c4-like AC028_09810 IPR036909 Cytochrome c-like domain superfamily AC028_09810 IPR009056 Cytochrome c-like domain AC028_09815 IPR006073 GTP binding domain AC028_09815 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AC028_09815 IPR030393 EngB-type guanine nucleotide-binding (G) domain AC028_09815 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09820 IPR001279 Metallo-beta-lactamase AC028_09820 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_09820 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AC028_09820 IPR022712 Beta-Casp domain AC028_09830 IPR006336 Glutamate--cysteine ligase, GCS2 AC028_09830 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria AC028_09830 IPR035434 Glutamate--cysteine ligase, bacteria and plant AC028_09830 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AC028_09840 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_09840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_09840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_09840 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_09840 IPR003594 Histidine kinase/HSP90-like ATPase AC028_09840 IPR003660 HAMP domain AC028_09840 IPR005467 Histidine kinase domain AC028_09845 IPR001789 Signal transduction response regulator, receiver domain AC028_09845 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_09845 IPR016032 Signal transduction response regulator, C-terminal effector AC028_09845 IPR039420 Transcriptional regulatory protein WalR-like AC028_09845 IPR011006 CheY-like superfamily AC028_09845 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_09860 IPR038390 Metal-sensitive transcriptional repressor superfamily AC028_09860 IPR003735 Metal-sensitive transcriptional repressor AC028_09865 IPR020843 Polyketide synthase, enoylreductase domain AC028_09865 IPR011032 GroES-like superfamily AC028_09865 IPR036291 NAD(P)-binding domain superfamily AC028_09865 IPR013154 Alcohol dehydrogenase, N-terminal AC028_09865 IPR013149 Alcohol dehydrogenase, C-terminal AC028_09865 IPR014183 Alcohol dehydrogenase class III AC028_09865 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_09870 IPR011057 Mss4-like superfamily AC028_09870 IPR014185 Glutathione-dependent formaldehyde-activating enzyme AC028_09870 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AC028_09875 IPR014186 S-formylglutathione hydrolase AC028_09875 IPR029058 Alpha/Beta hydrolase fold AC028_09875 IPR000801 Putative esterase AC028_09885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_09885 IPR015424 Pyridoxal phosphate-dependent transferase AC028_09885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_09885 IPR036390 Winged helix DNA-binding domain superfamily AC028_09885 IPR004839 Aminotransferase, class I/classII AC028_09885 IPR000524 Transcription regulator HTH, GntR AC028_09885 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_09890 IPR003719 Phenazine biosynthesis PhzF protein AC028_09895 IPR000620 EamA domain AC028_09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_09905 IPR022374 Energy-dependent translational throttle protein EttA AC028_09905 IPR017871 ABC transporter, conserved site AC028_09905 IPR003593 AAA+ ATPase domain AC028_09905 IPR003439 ABC transporter-like AC028_09905 IPR032781 ABC-transporter extension domain AC028_09915 IPR001085 Serine hydroxymethyltransferase AC028_09915 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AC028_09915 IPR039429 Serine hydroxymethyltransferase-like domain AC028_09915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_09915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_09915 IPR015424 Pyridoxal phosphate-dependent transferase AC028_09920 IPR003796 Ribonucleotide reductase regulator NrdR-like AC028_09920 IPR005144 ATP-cone domain AC028_09930 IPR004794 Riboflavin biosynthesis protein RibD AC028_09930 IPR002125 Cytidine and deoxycytidylate deaminase domain AC028_09930 IPR016193 Cytidine deaminase-like AC028_09930 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AC028_09930 IPR011549 Riboflavin-specific deaminase, C-terminal AC028_09930 IPR016192 APOBEC/CMP deaminase, zinc-binding AC028_09930 IPR024072 Dihydrofolate reductase-like domain superfamily AC028_09940 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AC028_09940 IPR026017 Lumazine-binding domain AC028_09940 IPR017938 Riboflavin synthase-like beta-barrel AC028_09940 IPR001783 Lumazine-binding protein AC028_09945 IPR036144 RibA-like superfamily AC028_09945 IPR032677 GTP cyclohydrolase II AC028_09945 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AC028_09945 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AC028_09950 IPR002180 Lumazine/riboflavin synthase AC028_09950 IPR036467 Lumazine/riboflavin synthase superfamily AC028_09950 IPR034964 Lumazine synthase AC028_09955 IPR011605 NusB antitermination factor AC028_09955 IPR035926 NusB-like superfamily AC028_09955 IPR006027 NusB/RsmB/TIM44 AC028_09960 IPR036921 PurM-like, N-terminal domain superfamily AC028_09960 IPR016188 PurM-like, N-terminal domain AC028_09960 IPR036676 PurM-like, C-terminal domain superfamily AC028_09960 IPR010918 PurM-like, C-terminal domain AC028_09960 IPR006283 Thiamine-monophosphate kinase AC028_09980 IPR004623 Potassium-transporting ATPase A chain AC028_09980 IPR023298 P-type ATPase, transmembrane domain superfamily AC028_09985 IPR023298 P-type ATPase, transmembrane domain superfamily AC028_09985 IPR023299 P-type ATPase, cytoplasmic domain N AC028_09985 IPR018303 P-type ATPase, phosphorylation site AC028_09985 IPR008250 P-type ATPase, A domain superfamily AC028_09985 IPR036412 HAD-like superfamily AC028_09985 IPR006391 P-type ATPase, B chain, subfamily IA AC028_09985 IPR001757 P-type ATPase AC028_09990 IPR003820 Potassium-transporting ATPase C chain AC028_09995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_09995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_09995 IPR029016 GAF-like domain superfamily AC028_09995 IPR003018 GAF domain AC028_09995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_09995 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal AC028_09995 IPR005467 Histidine kinase domain AC028_09995 IPR003594 Histidine kinase/HSP90-like ATPase AC028_09995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_09995 IPR025201 Sensor protein KdpD, transmembrane domain AC028_09995 IPR038318 KdpD, transmembrane domain superfamily AC028_10000 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_10000 IPR039420 Transcriptional regulatory protein WalR-like AC028_10000 IPR001789 Signal transduction response regulator, receiver domain AC028_10000 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_10000 IPR011006 CheY-like superfamily AC028_10005 IPR004490 Glycolate oxidase subunit GlcD AC028_10005 IPR006094 FAD linked oxidase, N-terminal AC028_10005 IPR016166 FAD-binding domain, PCMH-type AC028_10005 IPR036318 FAD-binding, type PCMH-like superfamily AC028_10005 IPR016164 FAD-linked oxidase-like, C-terminal AC028_10005 IPR004113 FAD-linked oxidase, C-terminal AC028_10005 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AC028_10010 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AC028_10015 IPR011856 tRNA endonuclease-like domain superfamily AC028_10015 IPR003509 Uncharacterised protein family UPF0102 AC028_10015 IPR011335 Restriction endonuclease type II-like AC028_10025 IPR035996 Tetrapyrrole methylase superfamily AC028_10025 IPR014777 Tetrapyrrole methylase, subdomain 1 AC028_10025 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AC028_10025 IPR014776 Tetrapyrrole methylase, subdomain 2 AC028_10025 IPR008189 rRNA small subunit methyltransferase I AC028_10025 IPR000878 Tetrapyrrole methylase AC028_10035 IPR038619 MraZ superfamily AC028_10035 IPR007159 SpoVT-AbrB domain AC028_10035 IPR037914 SpoVT-AbrB domain superfamily AC028_10035 IPR035644 MraZ, C-terminal AC028_10035 IPR035642 MraZ, N-terminal AC028_10035 IPR003444 Transcriptional regulator MraZ AC028_10035 IPR020603 MraZ domain AC028_10040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10040 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AC028_10040 IPR002903 Ribosomal RNA small subunit methyltransferase H AC028_10045 IPR011922 Cell division protein FtsL AC028_10055 IPR037532 Peptidoglycan D,D-transpeptidase FtsI AC028_10055 IPR001460 Penicillin-binding protein, transpeptidase AC028_10055 IPR012338 Beta-lactamase/transpeptidase-like AC028_10055 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AC028_10055 IPR005311 Penicillin-binding protein, dimerisation domain AC028_10060 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AC028_10060 IPR036565 Mur-like, catalytic domain superfamily AC028_10060 IPR004101 Mur ligase, C-terminal AC028_10060 IPR035911 MurE/MurF, N-terminal AC028_10060 IPR000713 Mur ligase, N-terminal catalytic domain AC028_10060 IPR013221 Mur ligase, central AC028_10060 IPR036615 Mur ligase, C-terminal domain superfamily AC028_10065 IPR036615 Mur ligase, C-terminal domain superfamily AC028_10065 IPR004101 Mur ligase, C-terminal AC028_10065 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase AC028_10065 IPR035911 MurE/MurF, N-terminal AC028_10065 IPR036565 Mur-like, catalytic domain superfamily AC028_10065 IPR013221 Mur ligase, central AC028_10065 IPR000713 Mur ligase, N-terminal catalytic domain AC028_10070 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AC028_10070 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AC028_10070 IPR000715 Glycosyl transferase, family 4 AC028_10075 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AC028_10075 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AC028_10080 IPR004276 Glycosyltransferase family 28, N-terminal domain AC028_10080 IPR007235 Glycosyl transferase, family 28, C-terminal AC028_10080 IPR006009 N-acetylglucosaminyltransferase, MurG AC028_10085 IPR004101 Mur ligase, C-terminal AC028_10085 IPR036565 Mur-like, catalytic domain superfamily AC028_10085 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AC028_10085 IPR013221 Mur ligase, central AC028_10085 IPR000713 Mur ligase, N-terminal catalytic domain AC028_10085 IPR036615 Mur ligase, C-terminal domain superfamily AC028_10090 IPR016185 Pre-ATP-grasp domain superfamily AC028_10090 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AC028_10090 IPR011095 D-alanine--D-alanine ligase, C-terminal AC028_10090 IPR005905 D-alanine--D-alanine ligase AC028_10090 IPR013815 ATP-grasp fold, subdomain 1 AC028_10090 IPR011761 ATP-grasp fold AC028_10090 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AC028_10095 IPR005548 Cell division protein FtsQ/DivIB AC028_10095 IPR026579 Cell division protein FtsQ AC028_10095 IPR034746 POTRA domain AC028_10095 IPR013685 POTRA domain, FtsQ-type AC028_10100 IPR020823 Cell division protein FtsA AC028_10100 IPR003494 SHS2 domain inserted in FtsA AC028_10105 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AC028_10105 IPR003008 Tubulin/FtsZ, GTPase domain AC028_10105 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AC028_10105 IPR008280 Tubulin/FtsZ, C-terminal AC028_10105 IPR024757 Cell division protein FtsZ, C-terminal AC028_10105 IPR020805 Cell division protein FtsZ, conserved site AC028_10105 IPR000158 Cell division protein FtsZ AC028_10110 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_10110 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AC028_10110 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AC028_10110 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AC028_10120 IPR016047 Peptidase M23 AC028_10120 IPR013731 Opacity-associated protein A, N-terminal AC028_10120 IPR018392 LysM domain AC028_10120 IPR011055 Duplicated hybrid motif AC028_10125 IPR036266 SecA, Wing/Scaffold superfamily AC028_10125 IPR011116 SecA Wing/Scaffold AC028_10125 IPR000185 Protein translocase subunit SecA AC028_10125 IPR014018 SecA motor DEAD AC028_10125 IPR011115 SecA DEAD-like, N-terminal AC028_10125 IPR011130 SecA, preprotein cross-linking domain AC028_10125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10125 IPR004027 SEC-C motif AC028_10125 IPR020937 SecA conserved site AC028_10125 IPR036670 SecA, preprotein cross-linking domain superfamily AC028_10130 IPR020476 NUDIX hydrolase AC028_10130 IPR000086 NUDIX hydrolase domain AC028_10130 IPR015797 NUDIX hydrolase-like domain superfamily AC028_10130 IPR020084 NUDIX hydrolase, conserved site AC028_10140 IPR003171 Methylenetetrahydrofolate reductase AC028_10140 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase AC028_10140 IPR029041 FAD-linked oxidoreductase-like AC028_10140 IPR004620 5,10-methylenetetrahydrofolate reductase AC028_10150 IPR014043 Acyl transferase AC028_10150 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_10150 IPR013149 Alcohol dehydrogenase, C-terminal AC028_10150 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_10150 IPR013154 Alcohol dehydrogenase, N-terminal AC028_10150 IPR016039 Thiolase-like AC028_10150 IPR036736 ACP-like superfamily AC028_10150 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AC028_10150 IPR036291 NAD(P)-binding domain superfamily AC028_10150 IPR032821 Ketoacyl-synthetase, C-terminal extension AC028_10150 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_10150 IPR020807 Polyketide synthase, dehydratase domain AC028_10150 IPR042104 Polyketide synthase, dehydratase domain superfamily AC028_10150 IPR018201 Beta-ketoacyl synthase, active site AC028_10150 IPR009081 Phosphopantetheine binding ACP domain AC028_10150 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AC028_10150 IPR013968 Polyketide synthase, ketoreductase domain AC028_10150 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_10150 IPR001227 Acyl transferase domain superfamily AC028_10150 IPR011032 GroES-like superfamily AC028_10150 IPR020843 Polyketide synthase, enoylreductase domain AC028_10155 IPR036852 Peptidase S8/S53 domain superfamily AC028_10155 IPR000209 Peptidase S8/S53 domain AC028_10155 IPR030400 Sedolisin domain AC028_10155 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_10155 IPR015366 Peptidase S53, activation domain AC028_10165 IPR036291 NAD(P)-binding domain superfamily AC028_10165 IPR000683 Oxidoreductase, N-terminal AC028_10170 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_10170 IPR006046 Alpha amylase AC028_10170 IPR017853 Glycoside hydrolase superfamily AC028_10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10195 IPR000863 Sulfotransferase domain AC028_10205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10205 IPR041698 Methyltransferase domain 25 AC028_10210 IPR000043 Adenosylhomocysteinase-like AC028_10210 IPR042172 Adenosylhomocysteinase-like superfamily AC028_10210 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC028_10210 IPR036291 NAD(P)-binding domain superfamily AC028_10210 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AC028_10225 IPR033129 Phosphoenolpyruvate carboxylase, His active site AC028_10225 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site AC028_10225 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AC028_10225 IPR021135 Phosphoenolpyruvate carboxylase AC028_10225 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_10245 IPR036737 OmpA-like domain superfamily AC028_10245 IPR002368 Outer membrane protein, OmpA AC028_10245 IPR000498 Outer membrane protein OmpA-like, transmembrane domain AC028_10245 IPR006665 OmpA-like domain AC028_10245 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AC028_10245 IPR006664 Outer membrane protein, bacterial AC028_10245 IPR006690 Outer membrane protein, OmpA-like, conserved site AC028_10260 IPR033379 Histidine acid phosphatase active site AC028_10260 IPR029033 Histidine phosphatase superfamily AC028_10260 IPR000560 Histidine phosphatase superfamily, clade-2 AC028_10265 IPR022631 S-adenosylmethionine synthetase, conserved site AC028_10265 IPR022630 S-adenosylmethionine synthetase, C-terminal AC028_10265 IPR022629 S-adenosylmethionine synthetase, central domain AC028_10265 IPR022628 S-adenosylmethionine synthetase, N-terminal AC028_10265 IPR022636 S-adenosylmethionine synthetase superfamily AC028_10265 IPR002133 S-adenosylmethionine synthetase AC028_10275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10275 IPR023506 Trans-aconitate 2-methyltransferase AC028_10275 IPR041698 Methyltransferase domain 25 AC028_10275 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal AC028_10280 IPR018517 tRNA-dihydrouridine synthase, conserved site AC028_10280 IPR013785 Aldolase-type TIM barrel AC028_10280 IPR032887 tRNA-dihydrouridine synthase B AC028_10280 IPR035587 DUS-like, FMN-binding domain AC028_10280 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AC028_10280 IPR001269 tRNA-dihydrouridine synthase AC028_10280 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AC028_10290 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AC028_10290 IPR011877 Ribokinase AC028_10290 IPR011611 Carbohydrate kinase PfkB AC028_10290 IPR002139 Ribokinase/fructokinase AC028_10290 IPR029056 Ribokinase-like AC028_10295 IPR002668 Concentrative nucleoside transporter N-terminal domain AC028_10295 IPR011657 Concentrative nucleoside transporter C-terminal domain AC028_10295 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AC028_10295 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial AC028_10295 IPR008276 Concentrative nucleoside transporter AC028_10300 IPR023210 NADP-dependent oxidoreductase domain AC028_10300 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_10310 IPR039426 Vitamin B12 transporter BtuB-like AC028_10310 IPR012910 TonB-dependent receptor, plug domain AC028_10310 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_10310 IPR010917 TonB-dependent receptor, conserved site AC028_10310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_10310 IPR010916 TonB box, conserved site AC028_10310 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_10330 IPR035906 MetI-like superfamily AC028_10330 IPR005889 Nitrate transport permease AC028_10330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_10335 IPR003593 AAA+ ATPase domain AC028_10335 IPR003439 ABC transporter-like AC028_10335 IPR015859 ABC transporter, taurine import, TauD AC028_10335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10335 IPR017871 ABC transporter, conserved site AC028_10345 IPR042098 Taurine dioxygenase TauD-like superfamily AC028_10345 IPR003819 TauD/TfdA-like domain AC028_10355 IPR003439 ABC transporter-like AC028_10355 IPR003593 AAA+ ATPase domain AC028_10355 IPR017871 ABC transporter, conserved site AC028_10355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10360 IPR013830 SGNH hydrolase-type esterase domain AC028_10360 IPR036514 SGNH hydrolase superfamily AC028_10365 IPR016032 Signal transduction response regulator, C-terminal effector AC028_10365 IPR001789 Signal transduction response regulator, receiver domain AC028_10365 IPR039420 Transcriptional regulatory protein WalR-like AC028_10365 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_10365 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_10365 IPR011006 CheY-like superfamily AC028_10370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_10370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_10370 IPR005467 Histidine kinase domain AC028_10370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_10370 IPR003594 Histidine kinase/HSP90-like ATPase AC028_10370 IPR013727 Two-component sensor kinase, N-terminal AC028_10370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_10380 IPR000829 DAGK family AC028_10380 IPR033718 Diacylglycerol kinase, prokaryotic AC028_10380 IPR036945 Diacylglycerol kinase (DAGK) superfamily AC028_10400 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AC028_10405 IPR020940 Thymidylate synthase, active site AC028_10405 IPR000398 Thymidylate synthase AC028_10405 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AC028_10405 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AC028_10415 IPR017925 Dihydrofolate reductase conserved site AC028_10415 IPR024072 Dihydrofolate reductase-like domain superfamily AC028_10415 IPR012259 Dihydrofolate reductase AC028_10415 IPR001796 Dihydrofolate reductase domain AC028_10420 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_10420 IPR029995 Transcriptional activator SfnR/FlbD AC028_10420 IPR003593 AAA+ ATPase domain AC028_10420 IPR009057 Homeobox-like domain superfamily AC028_10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10420 IPR025944 Sigma-54 interaction domain, conserved site AC028_10420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_10420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_10425 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_10425 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_10425 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AC028_10425 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_10425 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_10430 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AC028_10430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10430 IPR003439 ABC transporter-like AC028_10430 IPR003593 AAA+ ATPase domain AC028_10430 IPR017871 ABC transporter, conserved site AC028_10435 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_10435 IPR035906 MetI-like superfamily AC028_10445 IPR011251 Luciferase-like domain AC028_10445 IPR036661 Luciferase-like domain superfamily AC028_10445 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AC028_10450 IPR005025 NADPH-dependent FMN reductase-like AC028_10450 IPR019912 FMN reductase, MsuE-like AC028_10450 IPR029039 Flavoprotein-like superfamily AC028_10460 IPR002559 Transposase, IS4-like AC028_10460 IPR008490 Transposase InsH, N-terminal AC028_10470 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AC028_10470 IPR036661 Luciferase-like domain superfamily AC028_10470 IPR011251 Luciferase-like domain AC028_10475 IPR011980 Nickel ABC transporter, substrate-binding protein NikA AC028_10475 IPR030678 Peptide/nickel binding protein, MppA-type AC028_10475 IPR039424 Solute-binding protein family 5 AC028_10475 IPR023765 Solute-binding protein family 5, conserved site AC028_10475 IPR000914 Solute-binding protein family 5 domain AC028_10480 IPR035906 MetI-like superfamily AC028_10480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_10490 IPR003593 AAA+ ATPase domain AC028_10490 IPR003439 ABC transporter-like AC028_10490 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AC028_10490 IPR017871 ABC transporter, conserved site AC028_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10495 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AC028_10495 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AC028_10495 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AC028_10495 IPR029052 Metallo-dependent phosphatase-like AC028_10500 IPR023065 Uncharacterised protein family ApaG AC028_10500 IPR007474 ApaG domain AC028_10500 IPR036767 ApaG domain superfamily AC028_10505 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AC028_10505 IPR023165 rRNA adenine dimethylase-like AC028_10505 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AC028_10505 IPR011530 Ribosomal RNA adenine dimethylase AC028_10505 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AC028_10505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10510 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase AC028_10510 IPR005255 PdxA family AC028_10515 IPR015391 SurA N-terminal AC028_10515 IPR027304 Trigger factor/SurA domain superfamily AC028_10515 IPR023034 Peptidyl-prolyl isomerase SurA AC028_10515 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AC028_10520 IPR007543 LptD, C-terminal AC028_10520 IPR005653 Organic solvent tolerance-like, N-terminal AC028_10520 IPR020889 LPS-assembly protein LptD AC028_10525 IPR000286 Histone deacetylase family AC028_10525 IPR023696 Ureohydrolase domain superfamily AC028_10525 IPR037138 Histone deacetylase domain superfamily AC028_10525 IPR023801 Histone deacetylase domain AC028_10530 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AC028_10530 IPR016030 Cobalamin adenosyltransferase-like AC028_10530 IPR036451 Cobalamin adenosyltransferase-like superfamily AC028_10540 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AC028_10540 IPR002938 FAD-binding domain AC028_10540 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_10540 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AC028_10540 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AC028_10545 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AC028_10545 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AC028_10545 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_10545 IPR002938 FAD-binding domain AC028_10565 IPR000524 Transcription regulator HTH, GntR AC028_10565 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_10565 IPR036390 Winged helix DNA-binding domain superfamily AC028_10565 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_10565 IPR011711 GntR, C-terminal AC028_10570 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AC028_10570 IPR034937 Protocatechuate 4,5-dioxygenase beta chain AC028_10575 IPR036622 Dioxygenase LigAB, LigA subunit superfamily AC028_10575 IPR034940 Gallate dioxygenase, C-terminal AC028_10575 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AC028_10575 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AC028_10580 IPR005119 LysR, substrate-binding AC028_10580 IPR012787 Pca transcription factor PcaQ AC028_10580 IPR000847 Transcription regulator HTH, LysR AC028_10580 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_10580 IPR036390 Winged helix DNA-binding domain superfamily AC028_10585 IPR000873 AMP-dependent synthetase/ligase AC028_10585 IPR020845 AMP-binding, conserved site AC028_10585 IPR025110 AMP-binding enzyme, C-terminal domain AC028_10585 IPR042099 AMP-dependent synthetase-like superfamily AC028_10595 IPR001753 Enoyl-CoA hydratase/isomerase AC028_10595 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_10595 IPR029045 ClpP/crotonase-like domain superfamily AC028_10620 IPR004104 Oxidoreductase, C-terminal AC028_10620 IPR036291 NAD(P)-binding domain superfamily AC028_10620 IPR000683 Oxidoreductase, N-terminal AC028_10625 IPR040739 RlmM ferredoxin-like domain AC028_10625 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AC028_10625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10625 IPR011224 Ribosomal RNA large subunit methyltransferase M AC028_10650 IPR000620 EamA domain AC028_10660 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AC028_10660 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_10660 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AC028_10660 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AC028_10660 IPR004514 Glutamine-tRNA synthetase AC028_10660 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AC028_10660 IPR022861 Glutamine-tRNA ligase, bacterial AC028_10660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_10660 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AC028_10660 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AC028_10675 IPR011006 CheY-like superfamily AC028_10675 IPR001789 Signal transduction response regulator, receiver domain AC028_10675 IPR029787 Nucleotide cyclase AC028_10675 IPR000160 GGDEF domain AC028_10680 IPR003660 HAMP domain AC028_10680 IPR005467 Histidine kinase domain AC028_10680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_10680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_10680 IPR036641 HPT domain superfamily AC028_10680 IPR033414 Periplasmic sensor domain AC028_10680 IPR003594 Histidine kinase/HSP90-like ATPase AC028_10680 IPR001789 Signal transduction response regulator, receiver domain AC028_10680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_10680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_10680 IPR011006 CheY-like superfamily AC028_10680 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_10685 IPR001789 Signal transduction response regulator, receiver domain AC028_10685 IPR000792 Transcription regulator LuxR, C-terminal AC028_10685 IPR011006 CheY-like superfamily AC028_10685 IPR016032 Signal transduction response regulator, C-terminal effector AC028_10695 IPR002569 Peptide methionine sulphoxide reductase MsrA AC028_10695 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AC028_10705 IPR018225 Transaldolase, active site AC028_10705 IPR004730 Transaldolase type 1 AC028_10705 IPR013785 Aldolase-type TIM barrel AC028_10705 IPR001585 Transaldolase/Fructose-6-phosphate aldolase AC028_10710 IPR028625 Regulator of nucleoside diphosphate kinase AC028_10710 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AC028_10710 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AC028_10710 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AC028_10710 IPR023459 Transcription elongation factor GreA/GreB family AC028_10715 IPR036390 Winged helix DNA-binding domain superfamily AC028_10715 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_10715 IPR000847 Transcription regulator HTH, LysR AC028_10715 IPR005119 LysR, substrate-binding AC028_10720 IPR012081 Alkyl hydroperoxide reductase subunit F AC028_10720 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_10720 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AC028_10720 IPR002109 Glutaredoxin AC028_10720 IPR036249 Thioredoxin-like superfamily AC028_10720 IPR012336 Thioredoxin-like fold AC028_10720 IPR023753 FAD/NAD(P)-binding domain AC028_10725 IPR036249 Thioredoxin-like superfamily AC028_10725 IPR013766 Thioredoxin domain AC028_10725 IPR019479 Peroxiredoxin, C-terminal AC028_10725 IPR024706 Peroxiredoxin, AhpC-type AC028_10725 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AC028_10725 IPR017559 Alkyl hydroperoxide reductase subunit C AC028_10730 IPR007848 Methyltransferase small domain AC028_10730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_10730 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AC028_10730 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AC028_10730 IPR004556 Methyltransferase HemK-like AC028_10730 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_10735 IPR005944 Proline iminopeptidase AC028_10735 IPR002410 Peptidase S33 AC028_10735 IPR000073 Alpha/beta hydrolase fold-1 AC028_10735 IPR029058 Alpha/Beta hydrolase fold AC028_10745 IPR004385 Nucleoside diphosphate pyrophosphatase AC028_10745 IPR000086 NUDIX hydrolase domain AC028_10745 IPR020084 NUDIX hydrolase, conserved site AC028_10745 IPR015797 NUDIX hydrolase-like domain superfamily AC028_10750 IPR002562 3'-5' exonuclease domain AC028_10750 IPR029060 PIN-like domain superfamily AC028_10750 IPR036397 Ribonuclease H superfamily AC028_10750 IPR012337 Ribonuclease H-like superfamily AC028_10750 IPR018320 DNA polymerase 1 AC028_10750 IPR020045 DNA polymerase I-like, H3TH domain AC028_10750 IPR001098 DNA-directed DNA polymerase, family A, palm domain AC028_10750 IPR019760 DNA-directed DNA polymerase, family A, conserved site AC028_10750 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AC028_10750 IPR002421 5'-3' exonuclease, N-terminal AC028_10750 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AC028_10750 IPR008918 Helix-hairpin-helix motif, class 2 AC028_10750 IPR002298 DNA polymerase A AC028_10780 IPR036291 NAD(P)-binding domain superfamily AC028_10780 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AC028_10780 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AC028_10780 IPR026255 NAD(P) transhydrogenase, alpha subunit AC028_10780 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AC028_10780 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AC028_10780 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AC028_10800 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AC028_10805 IPR034300 NADP transhydrogenase beta-like domain AC028_10805 IPR012136 NADP transhydrogenase, beta subunit AC028_10805 IPR029035 DHS-like NAD/FAD-binding domain superfamily AC028_10820 IPR018300 Aminotransferase, class IV, conserved site AC028_10820 IPR036038 Aminotransferase-like, PLP-dependent enzymes AC028_10820 IPR001544 Aminotransferase class IV AC028_10820 IPR005786 Branched-chain amino acid aminotransferase II AC028_10820 IPR033939 Branched-chain aminotransferase AC028_10825 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_10825 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_10825 IPR036852 Peptidase S8/S53 domain superfamily AC028_10825 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_10825 IPR022398 Peptidase S8, subtilisin, His-active site AC028_10825 IPR034176 Peptidase MprA-like catalytic domain AC028_10825 IPR015500 Peptidase S8, subtilisin-related AC028_10825 IPR000209 Peptidase S8/S53 domain AC028_10830 IPR036852 Peptidase S8/S53 domain superfamily AC028_10830 IPR000209 Peptidase S8/S53 domain AC028_10830 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_10830 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_10830 IPR015500 Peptidase S8, subtilisin-related AC028_10830 IPR022398 Peptidase S8, subtilisin, His-active site AC028_10830 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_10830 IPR034176 Peptidase MprA-like catalytic domain AC028_10835 IPR022398 Peptidase S8, subtilisin, His-active site AC028_10835 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_10835 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_10835 IPR000209 Peptidase S8/S53 domain AC028_10835 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_10835 IPR015500 Peptidase S8, subtilisin-related AC028_10835 IPR036852 Peptidase S8/S53 domain superfamily AC028_10835 IPR034176 Peptidase MprA-like catalytic domain AC028_10840 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AC028_10840 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AC028_10840 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AC028_10855 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain AC028_10855 IPR013780 Glycosyl hydrolase, all-beta AC028_10855 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain AC028_10855 IPR017853 Glycoside hydrolase superfamily AC028_10855 IPR001139 Glycoside hydrolase family 30 AC028_10865 IPR010089 Flavoprotein WrbA-like AC028_10865 IPR001226 Flavodoxin, conserved site AC028_10865 IPR029039 Flavoprotein-like superfamily AC028_10865 IPR005025 NADPH-dependent FMN reductase-like AC028_10865 IPR008254 Flavodoxin/nitric oxide synthase AC028_10870 IPR017039 Virulence factor BrkB AC028_10870 IPR023679 Uncharacterised protein family UPF0761, bacterial AC028_10875 IPR013740 Redoxin AC028_10875 IPR036249 Thioredoxin-like superfamily AC028_10875 IPR017937 Thioredoxin, conserved site AC028_10875 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AC028_10875 IPR013766 Thioredoxin domain AC028_10880 IPR036046 Acylphosphatase-like domain superfamily AC028_10880 IPR001792 Acylphosphatase-like domain AC028_10880 IPR020456 Acylphosphatase AC028_10890 IPR022488 Polyphosphate kinase-2-related AC028_10890 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10890 IPR016898 Polyphosphate kinase 2 AC028_10890 IPR022486 Polyphosphate kinase 2, PA0141 AC028_10895 IPR036425 MoaB/Mog-like domain superfamily AC028_10895 IPR001453 MoaB/Mog domain AC028_10895 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AC028_10895 IPR008284 Molybdenum cofactor biosynthesis, conserved site AC028_10895 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AC028_10905 IPR004373 Peptide chain release factor 1 AC028_10905 IPR000352 Peptide chain release factor class I AC028_10905 IPR005139 Peptide chain release factor AC028_10910 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AC028_10910 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AC028_10910 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AC028_10910 IPR018214 Glutamyl-tRNA reductase, conserved site AC028_10910 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AC028_10910 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AC028_10910 IPR036291 NAD(P)-binding domain superfamily AC028_10910 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AC028_10915 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_10915 IPR019734 Tetratricopeptide repeat AC028_10915 IPR013026 Tetratricopeptide repeat-containing domain AC028_10920 IPR029046 Lipoprotein localisation LolA/LolB/LppX AC028_10920 IPR004565 Outer membrane lipoprotein LolB AC028_10925 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AC028_10925 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_10925 IPR013750 GHMP kinase, C-terminal domain AC028_10925 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_10925 IPR006204 GHMP kinase N-terminal domain AC028_10925 IPR036554 GHMP kinase, C-terminal domain superfamily AC028_10935 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AC028_10935 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AC028_10935 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AC028_10935 IPR005946 Ribose-phosphate pyrophosphokinase AC028_10935 IPR000836 Phosphoribosyltransferase domain AC028_10935 IPR029057 Phosphoribosyltransferase-like AC028_10940 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AC028_10940 IPR037121 Ribosomal protein L25, C-terminal AC028_10940 IPR020057 Ribosomal protein L25, beta domain AC028_10940 IPR001021 Ribosomal protein L25, long-form AC028_10940 IPR020055 Ribosomal protein L25, short-form AC028_10940 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AC028_10940 IPR029751 Ribosomal protein L25 AC028_10945 IPR018171 Peptidyl-tRNA hydrolase, conserved site AC028_10945 IPR001328 Peptidyl-tRNA hydrolase AC028_10945 IPR036416 Peptidyl-tRNA hydrolase superfamily AC028_10950 IPR012676 TGS-like AC028_10950 IPR012675 Beta-grasp domain superfamily AC028_10950 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AC028_10950 IPR006073 GTP binding domain AC028_10950 IPR031167 OBG-type guanine nucleotide-binding (G) domain AC028_10950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10950 IPR013029 YchF, C-terminal domain AC028_10950 IPR041706 YchF, N-terminal AC028_10950 IPR023192 TGS-like domain superfamily AC028_10950 IPR004095 TGS AC028_10970 IPR009000 Translation protein, beta-barrel domain superfamily AC028_10970 IPR033720 Elongation factor Tu, domain 2 AC028_10970 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_10970 IPR031157 Tr-type G domain, conserved site AC028_10970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_10970 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AC028_10970 IPR005225 Small GTP-binding protein domain AC028_10970 IPR004161 Translation elongation factor EFTu-like, domain 2 AC028_10970 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AC028_10970 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AC028_10970 IPR000795 Transcription factor, GTP-binding domain AC028_10980 IPR005807 SecE subunit of protein translocation complex, bacterial-like AC028_10980 IPR038379 SecE superfamily AC028_10980 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AC028_10985 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AC028_10985 IPR001062 Transcription antitermination protein, NusG AC028_10985 IPR014722 Ribosomal protein L2, domain 2 AC028_10985 IPR006645 NusG, N-terminal AC028_10985 IPR005824 KOW AC028_10985 IPR008991 Translation protein SH3-like domain superfamily AC028_10985 IPR036735 NusG, N-terminal domain superfamily AC028_10990 IPR006519 Ribosomal protein L11, bacterial-type AC028_10990 IPR020784 Ribosomal protein L11, N-terminal AC028_10990 IPR020783 Ribosomal protein L11, C-terminal AC028_10990 IPR000911 Ribosomal protein L11/L12 AC028_10990 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AC028_10990 IPR020785 Ribosomal protein L11, conserved site AC028_10990 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AC028_10995 IPR002143 Ribosomal protein L1 AC028_10995 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AC028_10995 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AC028_10995 IPR005878 Ribosomal protein L1, bacterial-type AC028_10995 IPR023673 Ribosomal protein L1, conserved site AC028_10995 IPR023674 Ribosomal protein L1-like AC028_11000 IPR022973 Ribosomal protein L10 AC028_11000 IPR001790 Ribosomal protein L10P AC028_11005 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_11005 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AC028_11005 IPR000206 Ribosomal protein L7/L12 AC028_11005 IPR008932 Ribosomal protein L7/L12, oligomerisation AC028_11005 IPR013823 Ribosomal protein L7/L12, C-terminal AC028_11010 IPR007642 RNA polymerase Rpb2, domain 2 AC028_11010 IPR014724 RNA polymerase Rpb2, OB-fold AC028_11010 IPR007641 RNA polymerase Rpb2, domain 7 AC028_11010 IPR007645 RNA polymerase Rpb2, domain 3 AC028_11010 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AC028_11010 IPR015712 DNA-directed RNA polymerase, subunit 2 AC028_11010 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AC028_11010 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AC028_11010 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AC028_11010 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AC028_11010 IPR007121 RNA polymerase, beta subunit, conserved site AC028_11010 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily AC028_11010 IPR007644 RNA polymerase, beta subunit, protrusion AC028_11015 IPR000722 RNA polymerase, alpha subunit AC028_11015 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AC028_11015 IPR007083 RNA polymerase Rpb1, domain 4 AC028_11015 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AC028_11015 IPR006592 RNA polymerase, N-terminal AC028_11015 IPR007080 RNA polymerase Rpb1, domain 1 AC028_11015 IPR007066 RNA polymerase Rpb1, domain 3 AC028_11015 IPR007081 RNA polymerase Rpb1, domain 5 AC028_11015 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AC028_11020 IPR006032 Ribosomal protein S12/S23 AC028_11020 IPR005679 Ribosomal protein S12, bacterial-type AC028_11020 IPR012340 Nucleic acid-binding, OB-fold AC028_11025 IPR000235 Ribosomal protein S5/S7 AC028_11025 IPR005717 Ribosomal protein S7, bacterial/organellar-type AC028_11025 IPR020606 Ribosomal protein S7, conserved site AC028_11025 IPR023798 Ribosomal protein S7 domain AC028_11025 IPR036823 Ribosomal protein S7 domain superfamily AC028_11030 IPR004540 Translation elongation factor EFG/EF2 AC028_11030 IPR005517 Translation elongation factor EFG/EF2, domain IV AC028_11030 IPR041095 Elongation Factor G, domain II AC028_11030 IPR009022 Elongation factor G, domain III AC028_11030 IPR035649 EFG, domain V AC028_11030 IPR035647 EF-G domain III/V-like AC028_11030 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_11030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_11030 IPR005225 Small GTP-binding protein domain AC028_11030 IPR000640 Elongation factor EFG, domain V-like AC028_11030 IPR004161 Translation elongation factor EFTu-like, domain 2 AC028_11030 IPR009000 Translation protein, beta-barrel domain superfamily AC028_11030 IPR000795 Transcription factor, GTP-binding domain AC028_11030 IPR031157 Tr-type G domain, conserved site AC028_11035 IPR000795 Transcription factor, GTP-binding domain AC028_11035 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AC028_11035 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_11035 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AC028_11035 IPR005225 Small GTP-binding protein domain AC028_11035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11035 IPR009000 Translation protein, beta-barrel domain superfamily AC028_11035 IPR004161 Translation elongation factor EFTu-like, domain 2 AC028_11035 IPR033720 Elongation factor Tu, domain 2 AC028_11035 IPR031157 Tr-type G domain, conserved site AC028_11035 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AC028_11040 IPR001848 Ribosomal protein S10 AC028_11040 IPR027486 Ribosomal protein S10 domain AC028_11040 IPR018268 Ribosomal protein S10, conserved site AC028_11040 IPR036838 Ribosomal protein S10 domain superfamily AC028_11045 IPR019926 Ribosomal protein L3, conserved site AC028_11045 IPR019927 Ribosomal protein L3, bacterial/organelle-type AC028_11045 IPR000597 Ribosomal protein L3 AC028_11045 IPR009000 Translation protein, beta-barrel domain superfamily AC028_11050 IPR013005 50S ribosomal protein uL4 AC028_11050 IPR002136 Ribosomal protein L4/L1e AC028_11050 IPR023574 Ribosomal protein L4 domain superfamily AC028_11055 IPR012678 Ribosomal protein L23/L15e core domain superfamily AC028_11055 IPR013025 Ribosomal protein L25/L23 AC028_11055 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AC028_11060 IPR005880 Ribosomal protein L2, bacterial/organellar-type AC028_11060 IPR012340 Nucleic acid-binding, OB-fold AC028_11060 IPR022666 Ribosomal Proteins L2, RNA binding domain AC028_11060 IPR008991 Translation protein SH3-like domain superfamily AC028_11060 IPR002171 Ribosomal protein L2 AC028_11060 IPR022669 Ribosomal protein L2, C-terminal AC028_11060 IPR014722 Ribosomal protein L2, domain 2 AC028_11060 IPR014726 Ribosomal protein L2, domain 3 AC028_11060 IPR022671 Ribosomal protein L2, conserved site AC028_11065 IPR002222 Ribosomal protein S19/S15 AC028_11065 IPR023575 Ribosomal protein S19, superfamily AC028_11065 IPR005732 Ribosomal protein S19, bacterial-type AC028_11065 IPR020934 Ribosomal protein S19 conserved site AC028_11070 IPR018260 Ribosomal protein L22/L17, conserved site AC028_11070 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AC028_11070 IPR001063 Ribosomal protein L22/L17 AC028_11070 IPR036394 Ribosomal protein L22/L17 superfamily AC028_11075 IPR004087 K Homology domain AC028_11075 IPR009019 K homology domain superfamily, prokaryotic type AC028_11075 IPR004044 K Homology domain, type 2 AC028_11075 IPR005704 Ribosomal protein S3, bacterial-type AC028_11075 IPR018280 Ribosomal protein S3, conserved site AC028_11075 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AC028_11075 IPR015946 K homology domain-like, alpha/beta AC028_11075 IPR001351 Ribosomal protein S3, C-terminal AC028_11080 IPR000114 Ribosomal protein L16 AC028_11080 IPR036920 Ribosomal protein L10e/L16 superfamily AC028_11080 IPR016180 Ribosomal protein L10e/L16 AC028_11080 IPR020798 Ribosomal protein L16, conserved site AC028_11085 IPR036049 Ribosomal protein L29/L35 superfamily AC028_11085 IPR001854 Ribosomal protein L29/L35 AC028_11090 IPR012340 Nucleic acid-binding, OB-fold AC028_11090 IPR019984 30S ribosomal protein S17 AC028_11090 IPR000266 Ribosomal protein S17/S11 AC028_11095 IPR000218 Ribosomal protein L14P AC028_11095 IPR036853 Ribosomal protein L14 superfamily AC028_11095 IPR019972 Ribosomal protein L14P, conserved site AC028_11095 IPR005745 Ribosomal protein L14P, bacterial-type AC028_11100 IPR005824 KOW AC028_11100 IPR003256 Ribosomal protein L24 AC028_11100 IPR014722 Ribosomal protein L2, domain 2 AC028_11100 IPR041988 Ribosomal Protein L26/L24, KOW domain AC028_11100 IPR008991 Translation protein SH3-like domain superfamily AC028_11105 IPR031310 Ribosomal protein L5, N-terminal AC028_11105 IPR020929 Ribosomal protein L5, conserved site AC028_11105 IPR031309 Ribosomal protein L5, C-terminal AC028_11105 IPR022803 Ribosomal protein L5 domain superfamily AC028_11105 IPR002132 Ribosomal protein L5 AC028_11105 IPR020930 Ribosomal protein L5, bacterial-type AC028_11110 IPR023036 Ribosomal protein S14, bacterial/plastid AC028_11110 IPR001209 Ribosomal protein S14 AC028_11115 IPR035987 Ribosomal protein S8 superfamily AC028_11115 IPR000630 Ribosomal protein S8 AC028_11120 IPR000702 Ribosomal protein L6 AC028_11120 IPR020040 Ribosomal protein L6, alpha-beta domain AC028_11120 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AC028_11120 IPR019906 Ribosomal protein L6, bacterial-type AC028_11120 IPR002358 Ribosomal protein L6, conserved site AC028_11125 IPR004389 Ribosomal protein L18, bacterial-type AC028_11125 IPR005484 Ribosomal protein L18 AC028_11130 IPR005324 Ribosomal protein S5, C-terminal AC028_11130 IPR005712 Ribosomal protein S5, bacterial-type AC028_11130 IPR018192 Ribosomal protein S5, N-terminal, conserved site AC028_11130 IPR013810 Ribosomal protein S5, N-terminal AC028_11130 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_11130 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_11130 IPR000851 Ribosomal protein S5 AC028_11135 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AC028_11135 IPR005996 Ribosomal protein L30, bacterial-type AC028_11135 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AC028_11140 IPR036227 Ribosomal L18e/L15P superfamily AC028_11140 IPR030878 Ribosomal protein L15 AC028_11140 IPR005749 Ribosomal protein L15, bacterial-type AC028_11140 IPR001196 Ribosomal protein L15, conserved site AC028_11140 IPR021131 Ribosomal protein L18e/L15P AC028_11145 IPR026593 Protein translocase subunit SecY AC028_11145 IPR002208 SecY/SEC61-alpha family AC028_11145 IPR030659 SecY conserved site AC028_11145 IPR023201 SecY domain superfamily AC028_11150 IPR010979 Ribosomal protein S13-like, H2TH AC028_11150 IPR027437 30s ribosomal protein S13, C-terminal AC028_11150 IPR019980 Ribosomal protein S13, bacterial-type AC028_11150 IPR018269 Ribosomal protein S13, conserved site AC028_11150 IPR001892 Ribosomal protein S13 AC028_11155 IPR036967 Ribosomal protein S11 superfamily AC028_11155 IPR018102 Ribosomal S11, conserved site AC028_11155 IPR019981 Ribosomal protein S11, bacterial-type AC028_11155 IPR001971 Ribosomal protein S11 AC028_11160 IPR036986 RNA-binding S4 domain superfamily AC028_11160 IPR022801 Ribosomal protein S4/S9 AC028_11160 IPR005709 Ribosomal protein S4, bacterial-type AC028_11160 IPR018079 Ribosomal protein S4, conserved site AC028_11160 IPR002942 RNA-binding S4 domain AC028_11160 IPR001912 Ribosomal protein S4/S9, N-terminal AC028_11165 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AC028_11165 IPR011260 RNA polymerase, alpha subunit, C-terminal AC028_11165 IPR036603 RNA polymerase, RBP11-like subunit AC028_11165 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AC028_11165 IPR011773 DNA-directed RNA polymerase, alpha subunit AC028_11165 IPR011262 DNA-directed RNA polymerase, insert domain AC028_11170 IPR000456 Ribosomal protein L17 AC028_11170 IPR036373 Ribosomal protein L17 superfamily AC028_11175 IPR023380 DsbB-like superfamily AC028_11175 IPR022920 Disulphide bond formation protein DsbB AC028_11175 IPR003752 Disulphide bond formation protein DsbB/BdbC AC028_11190 IPR002480 DAHP synthetase, class II AC028_11190 IPR013785 Aldolase-type TIM barrel AC028_11200 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AC028_11200 IPR036928 Amidase signature (AS) superfamily AC028_11200 IPR023631 Amidase signature domain AC028_11200 IPR020556 Amidase, conserved site AC028_11200 IPR000120 Amidase AC028_11215 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AC028_11215 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AC028_11215 IPR029000 Cyclophilin-like domain superfamily AC028_11220 IPR022383 Lactate/malate dehydrogenase, C-terminal AC028_11220 IPR001236 Lactate/malate dehydrogenase, N-terminal AC028_11220 IPR001557 L-lactate/malate dehydrogenase AC028_11220 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AC028_11220 IPR036291 NAD(P)-binding domain superfamily AC028_11220 IPR010945 Malate dehydrogenase, type 2 AC028_11225 IPR036249 Thioredoxin-like superfamily AC028_11225 IPR004046 Glutathione S-transferase, C-terminal AC028_11225 IPR004045 Glutathione S-transferase, N-terminal AC028_11225 IPR040079 Glutathione Transferase family AC028_11225 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_11225 IPR010987 Glutathione S-transferase, C-terminal-like AC028_11235 IPR023753 FAD/NAD(P)-binding domain AC028_11235 IPR013785 Aldolase-type TIM barrel AC028_11235 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_11235 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AC028_11240 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 AC028_11240 IPR011032 GroES-like superfamily AC028_11240 IPR013154 Alcohol dehydrogenase, N-terminal AC028_11240 IPR020843 Polyketide synthase, enoylreductase domain AC028_11240 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AC028_11240 IPR036291 NAD(P)-binding domain superfamily AC028_11240 IPR013149 Alcohol dehydrogenase, C-terminal AC028_11245 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AC028_11245 IPR006664 Outer membrane protein, bacterial AC028_11245 IPR006665 OmpA-like domain AC028_11245 IPR028974 TSP type-3 repeat AC028_11245 IPR036737 OmpA-like domain superfamily AC028_11245 IPR006690 Outer membrane protein, OmpA-like, conserved site AC028_11245 IPR008722 Outer membrane porin F, N-terminal AC028_11255 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AC028_11255 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_11255 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_11255 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AC028_11255 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AC028_11265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_11265 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase AC028_11265 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AC028_11265 IPR004839 Aminotransferase, class I/classII AC028_11265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_11265 IPR015424 Pyridoxal phosphate-dependent transferase AC028_11270 IPR005669 Thiosulphate/Sulfate-binding protein AC028_11270 IPR034408 Sulphate/thiosulphate-binding site AC028_11270 IPR000957 Sulphate/thiosulphate-binding, conserved site AC028_11275 IPR011865 Sulphate ABC transporter, permease protein CysT AC028_11275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_11275 IPR035906 MetI-like superfamily AC028_11275 IPR005667 Sulphate ABC transporter permease protein 2 AC028_11280 IPR035906 MetI-like superfamily AC028_11280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_11280 IPR005667 Sulphate ABC transporter permease protein 2 AC028_11280 IPR011866 Sulphate ABC transporter, permease protein CysW AC028_11285 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AC028_11285 IPR041193 CysA, C-terminal regulatory domain AC028_11285 IPR008995 Molybdate/tungstate binding, C-terminal AC028_11285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11285 IPR005666 Sulphate transport system permease protein 1 AC028_11285 IPR003593 AAA+ ATPase domain AC028_11285 IPR003439 ABC transporter-like AC028_11285 IPR024765 TOBE-like domain AC028_11285 IPR017871 ABC transporter, conserved site AC028_11295 IPR036291 NAD(P)-binding domain superfamily AC028_11295 IPR004627 L-threonine 3-dehydrogenase AC028_11295 IPR011032 GroES-like superfamily AC028_11295 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_11295 IPR013154 Alcohol dehydrogenase, N-terminal AC028_11295 IPR013149 Alcohol dehydrogenase, C-terminal AC028_11295 IPR020843 Polyketide synthase, enoylreductase domain AC028_11305 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_11305 IPR017850 Alkaline-phosphatase-like, core domain superfamily AC028_11305 IPR017767 Bacterial phospholipase C, phosphocholine-specific AC028_11305 IPR007312 Phosphoesterase AC028_11305 IPR008475 Bacterial phospholipase C, C-terminal domain AC028_11310 IPR009003 Peptidase S1, PA clan AC028_11310 IPR019500 Peptidase S46 AC028_11315 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_11315 IPR029033 Histidine phosphatase superfamily AC028_11320 IPR036565 Mur-like, catalytic domain superfamily AC028_11320 IPR004101 Mur ligase, C-terminal AC028_11320 IPR036615 Mur ligase, C-terminal domain superfamily AC028_11320 IPR001645 Folylpolyglutamate synthetase AC028_11320 IPR018109 Folylpolyglutamate synthetase, conserved site AC028_11320 IPR013221 Mur ligase, central AC028_11335 IPR005854 Amidophosphoribosyltransferase AC028_11335 IPR000836 Phosphoribosyltransferase domain AC028_11335 IPR029057 Phosphoribosyltransferase-like AC028_11335 IPR035584 Amidophosphoribosyltransferase, N-terminal AC028_11335 IPR017932 Glutamine amidotransferase type 2 domain AC028_11335 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_11340 IPR009078 Ferritin-like superfamily AC028_11340 IPR011197 Uncharacterised conserved protein UCP012318 AC028_11340 IPR007402 Protein of unknown function DUF455 AC028_11355 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AC028_11355 IPR029052 Metallo-dependent phosphatase-like AC028_11355 IPR010138 UDP-2,3-diacylglucosamine hydrolase AC028_11360 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_11360 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AC028_11365 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AC028_11365 IPR001296 Glycosyl transferase, family 1 AC028_11370 IPR030673 Pyrophosphatase, GppA/Ppx-type AC028_11370 IPR003695 Ppx/GppA phosphatase AC028_11370 IPR022371 Exopolyphosphatase AC028_11375 IPR025198 Polyphosphate kinase N-terminal domain AC028_11375 IPR024953 Polyphosphate kinase middle domain AC028_11375 IPR036832 Polyphosphate kinase N-terminal domain superfamily AC028_11375 IPR025200 Polyphosphate kinase C-terminal domain 2 AC028_11375 IPR036830 Polyphosphate kinase middle domain superfamily AC028_11375 IPR003414 Polyphosphate kinase AC028_11375 IPR041108 Polyphosphate kinase, C-terminal domain 1 AC028_11380 IPR005467 Histidine kinase domain AC028_11380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_11380 IPR021766 Phosphate regulon sensor protein PhoR AC028_11380 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AC028_11380 IPR035965 PAS domain superfamily AC028_11380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_11380 IPR000014 PAS domain AC028_11380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_11380 IPR003594 Histidine kinase/HSP90-like ATPase AC028_11380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_11380 IPR013767 PAS fold AC028_11385 IPR001789 Signal transduction response regulator, receiver domain AC028_11385 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_11385 IPR039420 Transcriptional regulatory protein WalR-like AC028_11385 IPR011006 CheY-like superfamily AC028_11385 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_11385 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AC028_11385 IPR016032 Signal transduction response regulator, C-terminal effector AC028_11390 IPR013026 Tetratricopeptide repeat-containing domain AC028_11390 IPR030873 Beta-barrel assembly-enhancing protease AC028_11390 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_11390 IPR001915 Peptidase M48 AC028_11390 IPR019734 Tetratricopeptide repeat AC028_11395 IPR011767 Glutaredoxin active site AC028_11395 IPR011900 Glutaredoxin, GrxC AC028_11395 IPR014025 Glutaredoxin subgroup AC028_11395 IPR002109 Glutaredoxin AC028_11395 IPR036249 Thioredoxin-like superfamily AC028_11405 IPR024084 Isopropylmalate dehydrogenase-like domain AC028_11450 IPR005215 Trigger factor AC028_11450 IPR008880 Trigger factor, C-terminal AC028_11450 IPR037041 Trigger factor, C-terminal domain superfamily AC028_11450 IPR008881 Trigger factor, ribosome-binding, bacterial AC028_11450 IPR036611 Trigger factor ribosome-binding domain superfamily AC028_11450 IPR027304 Trigger factor/SurA domain superfamily AC028_11455 IPR001907 ATP-dependent Clp protease proteolytic subunit AC028_11455 IPR029045 ClpP/crotonase-like domain superfamily AC028_11455 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AC028_11455 IPR033135 ClpP, histidine active site AC028_11455 IPR018215 ClpP, Ser active site AC028_11460 IPR003593 AAA+ ATPase domain AC028_11460 IPR038366 Zinc finger, ClpX C4-type superfamily AC028_11460 IPR003959 ATPase, AAA-type, core AC028_11460 IPR010603 Zinc finger, ClpX C4-type AC028_11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11460 IPR004487 Clp protease, ATP-binding subunit ClpX AC028_11460 IPR019489 Clp ATPase, C-terminal AC028_11465 IPR015947 PUA-like superfamily AC028_11465 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_11465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_11465 IPR003593 AAA+ ATPase domain AC028_11465 IPR027065 Lon protease AC028_11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11465 IPR003111 Lon, substrate-binding domain AC028_11465 IPR004815 Lon protease, bacterial/eukaryotic-type AC028_11465 IPR008268 Peptidase S16, active site AC028_11465 IPR008269 Peptidase S16, Lon proteolytic domain AC028_11465 IPR003959 ATPase, AAA-type, core AC028_11465 IPR027543 Lon protease, bacterial AC028_11470 IPR020816 Histone-like DNA-binding protein, conserved site AC028_11470 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AC028_11470 IPR000119 Histone-like DNA-binding protein AC028_11490 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AC028_11490 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AC028_11490 IPR023059 Foldase protein PrsA AC028_11490 IPR027304 Trigger factor/SurA domain superfamily AC028_11500 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_11500 IPR001279 Metallo-beta-lactamase AC028_11500 IPR017782 Hydroxyacylglutathione hydrolase AC028_11500 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AC028_11500 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AC028_11510 IPR022892 Ribonuclease HI AC028_11510 IPR036397 Ribonuclease H superfamily AC028_11510 IPR012337 Ribonuclease H-like superfamily AC028_11510 IPR002156 Ribonuclease H domain AC028_11515 IPR036397 Ribonuclease H superfamily AC028_11515 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AC028_11515 IPR006309 DNA polymerase 3, epsilon subunit AC028_11515 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_11515 IPR012337 Ribonuclease H-like superfamily AC028_11520 IPR015655 Protein phosphatase 2C family AC028_11520 IPR001932 PPM-type phosphatase domain AC028_11520 IPR036457 PPM-type phosphatase domain superfamily AC028_11535 IPR002201 Glycosyl transferase, family 9 AC028_11540 IPR011009 Protein kinase-like domain superfamily AC028_11540 IPR022826 3-deoxy-D-manno-octulosonic acid kinase AC028_11545 IPR013471 Ribonuclease Z/BN AC028_11545 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_11545 IPR001279 Metallo-beta-lactamase AC028_11550 IPR013785 Aldolase-type TIM barrel AC028_11550 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AC028_11550 IPR007197 Radical SAM AC028_11550 IPR010505 Molybdenum cofactor synthesis C-terminal AC028_11550 IPR006638 Elp3/MiaB/NifB AC028_11550 IPR013483 Molybdenum cofactor biosynthesis protein A AC028_11560 IPR023045 Molybdenum cofactor biosynthesis C AC028_11560 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AC028_11560 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AC028_11565 IPR012675 Beta-grasp domain superfamily AC028_11565 IPR003749 Sulfur carrier ThiS/MoaD-like AC028_11565 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AC028_11570 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AC028_11570 IPR003448 Molybdopterin biosynthesis MoaE AC028_11580 IPR021029 DNA polymerase III, tau subunit, domain V AC028_11580 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily AC028_11580 IPR003593 AAA+ ATPase domain AC028_11580 IPR001270 ClpA/B family AC028_11580 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AC028_11580 IPR012763 DNA polymerase III, subunit gamma/ tau AC028_11580 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AC028_11580 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11580 IPR022754 DNA polymerase III, gamma subunit, domain III AC028_11585 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_11585 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AC028_11590 IPR006171 TOPRIM domain AC028_11590 IPR034137 RecR, TOPRIM domain AC028_11590 IPR023628 Recombination protein RecR, C4-type zinc finger AC028_11590 IPR015967 Recombination protein RecR, conserved site AC028_11590 IPR023627 Recombination protein RecR AC028_11590 IPR000093 DNA recombination protein RecR AC028_11595 IPR019808 Histidine triad, conserved site AC028_11595 IPR001310 Histidine triad (HIT) protein AC028_11595 IPR011146 HIT-like domain AC028_11595 IPR036265 HIT-like superfamily AC028_11605 IPR002931 Transglutaminase-like AC028_11605 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal AC028_11605 IPR038765 Papain-like cysteine peptidase superfamily AC028_11605 IPR025403 Domain of unknown function DUF4129 AC028_11615 IPR041628 ChlI/MoxR, AAA lid domain AC028_11615 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11615 IPR011703 ATPase, AAA-3 AC028_11625 IPR029044 Nucleotide-diphospho-sugar transferases AC028_11635 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_11635 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AC028_11640 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria AC028_11640 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AC028_11645 IPR002677 Ribosomal protein L32p AC028_11645 IPR011332 Zinc-binding ribosomal protein AC028_11650 IPR016039 Thiolase-like AC028_11650 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC028_11650 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AC028_11650 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AC028_11660 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AC028_11660 IPR024925 Malonyl CoA-acyl carrier protein transacylase AC028_11660 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AC028_11660 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AC028_11660 IPR014043 Acyl transferase AC028_11660 IPR001227 Acyl transferase domain superfamily AC028_11665 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_11665 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AC028_11665 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_11665 IPR036291 NAD(P)-binding domain superfamily AC028_11670 IPR009081 Phosphopantetheine binding ACP domain AC028_11670 IPR003231 Acyl carrier protein (ACP) AC028_11670 IPR006162 Phosphopantetheine attachment site AC028_11670 IPR036736 ACP-like superfamily AC028_11675 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AC028_11675 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_11675 IPR016039 Thiolase-like AC028_11675 IPR000794 Beta-ketoacyl synthase AC028_11675 IPR018201 Beta-ketoacyl synthase, active site AC028_11675 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_11675 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_11680 IPR005801 ADC synthase AC028_11680 IPR019999 Anthranilate synthase component I-like AC028_11680 IPR006805 Anthranilate synthase component I, N-terminal AC028_11680 IPR015890 Chorismate-utilising enzyme, C-terminal AC028_11680 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I AC028_11685 IPR003770 Endolytic murein transglycosylase AC028_11690 IPR004622 DNA polymerase III, delta prime subunit AC028_11690 IPR015199 DNA polymerase III, delta subunit, C-terminal AC028_11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11710 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR AC028_11710 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_11710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_11710 IPR025944 Sigma-54 interaction domain, conserved site AC028_11710 IPR003593 AAA+ ATPase domain AC028_11710 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal AC028_11710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11710 IPR009057 Homeobox-like domain superfamily AC028_11710 IPR002197 DNA binding HTH domain, Fis-type AC028_11715 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AC028_11715 IPR039556 ICL/PEPM domain AC028_11715 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_11715 IPR040442 Pyruvate kinase-like domain superfamily AC028_11715 IPR012695 2-methylisocitrate lyase AC028_11720 IPR036969 Citrate synthase superfamily AC028_11720 IPR024176 Citrate synthase, bacterial-type AC028_11720 IPR002020 Citrate synthase AC028_11720 IPR019810 Citrate synthase active site AC028_11720 IPR016142 Citrate synthase-like, large alpha subdomain AC028_11720 IPR011278 2-methylcitrate synthase/citrate synthase type I AC028_11720 IPR016143 Citrate synthase-like, small alpha subdomain AC028_11725 IPR036008 Aconitase, iron-sulfur domain AC028_11725 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent AC028_11725 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AC028_11725 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AC028_11725 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AC028_11725 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_11725 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AC028_11735 IPR012709 2-methyl-aconitate isomerase PrpF AC028_11735 IPR007400 PrpF protein AC028_11740 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_11740 IPR012910 TonB-dependent receptor, plug domain AC028_11740 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_11740 IPR010105 TonB-dependent siderophore receptor AC028_11740 IPR039426 Vitamin B12 transporter BtuB-like AC028_11750 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AC028_11750 IPR001599 Alpha-2-macroglobulin AC028_11750 IPR021868 Alpha-2-macroglobulin MG3 domain AC028_11750 IPR040639 Alpha-2-macroglobulin, MG1 domain AC028_11750 IPR026284 Alpha-2-macroglobulin, bacteria AC028_11750 IPR002890 Macroglobulin domain AC028_11750 IPR011625 Alpha-2-macroglobulin, bait region domain AC028_11750 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain AC028_11750 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain AC028_11750 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain AC028_11765 IPR012338 Beta-lactamase/transpeptidase-like AC028_11765 IPR001264 Glycosyl transferase, family 51 AC028_11765 IPR023346 Lysozyme-like domain superfamily AC028_11765 IPR009647 Penicillin-binding, C-terminal AC028_11765 IPR036950 Penicillin binding protein transglycosylase domain AC028_11765 IPR011815 Penicillin-binding protein 1C AC028_11765 IPR001460 Penicillin-binding protein, transpeptidase AC028_11775 IPR013740 Redoxin AC028_11775 IPR036249 Thioredoxin-like superfamily AC028_11775 IPR013766 Thioredoxin domain AC028_11775 IPR037944 Peroxiredoxin-5-like AC028_11785 IPR008971 HSP40/DnaJ peptide-binding AC028_11785 IPR023859 DNA-binding protein, curved-DNA AC028_11785 IPR018253 DnaJ domain, conserved site AC028_11785 IPR002939 Chaperone DnaJ, C-terminal AC028_11785 IPR001623 DnaJ domain AC028_11785 IPR036869 Chaperone J-domain superfamily AC028_11790 IPR011006 CheY-like superfamily AC028_11790 IPR001789 Signal transduction response regulator, receiver domain AC028_11795 IPR001107 Band 7 domain AC028_11795 IPR001972 Stomatin family AC028_11795 IPR020980 Menbrane protein HflK, N-terminal AC028_11795 IPR010201 HflK AC028_11795 IPR036013 Band 7/SPFH domain superfamily AC028_11800 IPR001107 Band 7 domain AC028_11800 IPR036013 Band 7/SPFH domain superfamily AC028_11800 IPR010200 HflC AC028_11810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11810 IPR018220 Adenylosuccinate synthase, GTP-binding site AC028_11810 IPR033128 Adenylosuccinate synthase, active site AC028_11810 IPR042109 Adenylosuccinate synthetase, domain 1 AC028_11810 IPR042110 Adenylosuccinate synthetase, domain 2 AC028_11810 IPR001114 Adenylosuccinate synthetase AC028_11810 IPR042111 Adenylosuccinate synthetase, domain 3 AC028_11815 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AC028_11815 IPR014782 Peptidase M1, membrane alanine aminopeptidase AC028_11815 IPR034016 Aminopeptidase N-type AC028_11815 IPR042097 Aminopeptidase N-like , N-terminal AC028_11815 IPR024571 ERAP1-like C-terminal domain AC028_11825 IPR036291 NAD(P)-binding domain superfamily AC028_11825 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_11825 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_11830 IPR009057 Homeobox-like domain superfamily AC028_11830 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_11830 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AC028_11830 IPR001647 DNA-binding HTH domain, TetR-type AC028_11845 IPR002514 Transposase IS3/IS911family AC028_11845 IPR009057 Homeobox-like domain superfamily AC028_11845 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_11850 IPR012337 Ribonuclease H-like superfamily AC028_11850 IPR036397 Ribonuclease H superfamily AC028_11850 IPR025948 HTH-like domain AC028_11850 IPR001584 Integrase, catalytic core AC028_11885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_11885 IPR003356 DNA methylase, adenine-specific AC028_11885 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AC028_11890 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 AC028_11895 IPR000055 Restriction endonuclease, type I, HsdS AC028_11900 IPR004473 Restriction endonuclease, type I, HsdR AC028_11900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11900 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_11900 IPR040980 SWI2/SNF2 ATPase AC028_11900 IPR021810 Protein of unknown function DUF3387 AC028_11900 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AC028_11925 IPR036397 Ribonuclease H superfamily AC028_11925 IPR029033 Histidine phosphatase superfamily AC028_11925 IPR012337 Ribonuclease H-like superfamily AC028_11925 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_11925 IPR002156 Ribonuclease H domain AC028_11925 IPR014636 RNase H, phosphoglycerate mutase domain-containing AC028_11930 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AC028_11930 IPR029056 Ribokinase-like AC028_11945 IPR011613 GH15-like domain AC028_11945 IPR012341 Six-hairpin glycosidase-like superfamily AC028_11945 IPR008928 Six-hairpin glycosidase superfamily AC028_11950 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_11950 IPR036291 NAD(P)-binding domain superfamily AC028_11950 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_11955 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AC028_11955 IPR005887 Alpha-1,2-mannosidase, putative AC028_11955 IPR012939 Glycosyl hydrolase family 92 AC028_11955 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_11955 IPR008928 Six-hairpin glycosidase superfamily AC028_11960 IPR036291 NAD(P)-binding domain superfamily AC028_11960 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_11960 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_11975 IPR005982 Thioredoxin reductase AC028_11975 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AC028_11975 IPR023753 FAD/NAD(P)-binding domain AC028_11975 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_11995 IPR041552 UvrA DNA-binding domain AC028_11995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_11995 IPR017871 ABC transporter, conserved site AC028_12000 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AC028_12000 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AC028_12000 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AC028_12000 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_12005 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_12005 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AC028_12005 IPR016166 FAD-binding domain, PCMH-type AC028_12005 IPR036318 FAD-binding, type PCMH-like superfamily AC028_12005 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_12005 IPR002346 Molybdopterin dehydrogenase, FAD-binding AC028_12010 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_12010 IPR012675 Beta-grasp domain superfamily AC028_12010 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AC028_12010 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_12010 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_12010 IPR002888 [2Fe-2S]-binding AC028_12010 IPR036884 [2Fe-2S]-binding domain superfamily AC028_12045 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_12045 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_12045 IPR036390 Winged helix DNA-binding domain superfamily AC028_12045 IPR006200 Transcription regulator LexA AC028_12045 IPR006199 LexA repressor, DNA-binding domain AC028_12045 IPR039418 LexA-like AC028_12045 IPR036286 LexA/Signal peptidase-like superfamily AC028_12045 IPR006197 Peptidase S24, LexA-like AC028_12065 IPR023073 DNA polymerase, error-prone AC028_12065 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AC028_12065 IPR040982 DNA polymerase III alpha subunit finger domain AC028_12065 IPR004805 DNA polymerase III, alpha subunit AC028_12065 IPR029460 DNA polymerase, helix-hairpin-helix motif AC028_12065 IPR016195 Polymerase/histidinol phosphatase-like AC028_12065 IPR003141 Polymerase/histidinol phosphatase, N-terminal AC028_12065 IPR004013 PHP domain AC028_12080 IPR004813 Oligopeptide transporter, OPT superfamily AC028_12080 IPR004814 Oligopeptide transporter OPT AC028_12095 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AC028_12095 IPR011042 Six-bladed beta-propeller, TolB-like AC028_12095 IPR029058 Alpha/Beta hydrolase fold AC028_12095 IPR002469 Dipeptidylpeptidase IV, N-terminal domain AC028_12095 IPR011659 WD40-like Beta Propeller AC028_12115 IPR014710 RmlC-like jelly roll fold AC028_12115 IPR018060 DNA binding HTH domain, AraC-type AC028_12115 IPR037923 Transcription regulator HTH-like AC028_12115 IPR009057 Homeobox-like domain superfamily AC028_12115 IPR003313 AraC-type arabinose-binding/dimerisation domain AC028_12130 IPR024708 Catalase active site AC028_12130 IPR018028 Catalase, mono-functional, haem-containing AC028_12130 IPR002226 Catalase haem-binding site AC028_12130 IPR011614 Catalase core domain AC028_12130 IPR037060 Catalase core domain superfamily AC028_12130 IPR010582 Catalase immune-responsive domain AC028_12130 IPR041399 Large catalase, C-terminal domain AC028_12130 IPR024712 Catalase, mono-functional, haem-containing, clade 2 AC028_12130 IPR029062 Class I glutamine amidotransferase-like AC028_12130 IPR020835 Catalase superfamily AC028_12135 IPR020471 Aldo/keto reductase AC028_12135 IPR023210 NADP-dependent oxidoreductase domain AC028_12135 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_12140 IPR019826 Carboxylesterase type B, active site AC028_12140 IPR002018 Carboxylesterase, type B AC028_12140 IPR029058 Alpha/Beta hydrolase fold AC028_12145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_12145 IPR020581 Glycine cleavage system P protein AC028_12145 IPR003437 Glycine dehydrogenase (decarboxylating) AC028_12145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_12145 IPR015424 Pyridoxal phosphate-dependent transferase AC028_12150 IPR004734 Multidrug resistance protein AC028_12150 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AC028_12150 IPR036259 MFS transporter superfamily AC028_12150 IPR020846 Major facilitator superfamily domain AC028_12150 IPR011701 Major facilitator superfamily AC028_12165 IPR000917 Sulfatase, N-terminal AC028_12165 IPR040423 Phosphoethanolamine transferase AC028_12165 IPR017850 Alkaline-phosphatase-like, core domain superfamily AC028_12165 IPR012549 Phosphoethanolamine transferase, N-terminal AC028_12180 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_12180 IPR001789 Signal transduction response regulator, receiver domain AC028_12180 IPR011006 CheY-like superfamily AC028_12180 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_12180 IPR039420 Transcriptional regulatory protein WalR-like AC028_12185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12185 IPR005467 Histidine kinase domain AC028_12185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12185 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12185 IPR003660 HAMP domain AC028_12185 IPR013727 Two-component sensor kinase, N-terminal AC028_12195 IPR005527 Cell division topological specificity factor MinE AC028_12195 IPR036707 Cell division topological specificity factor MinE superfamily AC028_12200 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_12200 IPR010223 ATP binding protein MinD, bacterial-type AC028_12200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12200 IPR025501 ATP binding protein MinD AC028_12205 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AC028_12205 IPR013033 Septum formation inhibitor MinC AC028_12205 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily AC028_12205 IPR007874 Septum formation inhibitor MinC, N-terminal AC028_12205 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AC028_12205 IPR005526 Septum formation inhibitor MinC, C-terminal AC028_12215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12215 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AC028_12215 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12220 IPR000792 Transcription regulator LuxR, C-terminal AC028_12220 IPR011006 CheY-like superfamily AC028_12220 IPR016032 Signal transduction response regulator, C-terminal effector AC028_12220 IPR001789 Signal transduction response regulator, receiver domain AC028_12235 IPR011257 DNA glycosylase AC028_12235 IPR003265 HhH-GPD domain AC028_12260 IPR016185 Pre-ATP-grasp domain superfamily AC028_12260 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AC028_12260 IPR013815 ATP-grasp fold, subdomain 1 AC028_12260 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase AC028_12260 IPR011054 Rudiment single hybrid motif AC028_12260 IPR011761 ATP-grasp fold AC028_12270 IPR007472 N-end rule aminoacyl transferase, C-terminal AC028_12270 IPR030700 N-end rule aminoacyl transferase AC028_12270 IPR017138 Aspartate/glutamate leucyltransferase AC028_12270 IPR016181 Acyl-CoA N-acyltransferase AC028_12270 IPR007471 N-end aminoacyl transferase, N-terminal AC028_12290 IPR029069 HotDog domain superfamily AC028_12290 IPR003703 Acyl-CoA thioesterase AC028_12295 IPR001753 Enoyl-CoA hydratase/isomerase AC028_12295 IPR029045 ClpP/crotonase-like domain superfamily AC028_12305 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AC028_12305 IPR029069 HotDog domain superfamily AC028_12310 IPR017871 ABC transporter, conserved site AC028_12310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12310 IPR004602 UvrABC system subunit A AC028_12310 IPR041552 UvrA DNA-binding domain AC028_12310 IPR041102 UvrA, interaction domain AC028_12310 IPR003439 ABC transporter-like AC028_12315 IPR036164 L21-like superfamily AC028_12315 IPR028909 Ribosomal protein L21-like AC028_12315 IPR001787 Ribosomal protein L21 AC028_12315 IPR018258 Ribosomal protein L21, conserved site AC028_12320 IPR001684 Ribosomal protein L27 AC028_12320 IPR018261 Ribosomal protein L27, conserved site AC028_12325 IPR006169 GTP1/OBG domain AC028_12325 IPR006074 GTP1/OBG, conserved site AC028_12325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12325 IPR031167 OBG-type guanine nucleotide-binding (G) domain AC028_12325 IPR036726 GTP1/OBG domain superfamily AC028_12325 IPR035101 GTP-binding protein, Obg-type AC028_12325 IPR006073 GTP binding domain AC028_12325 IPR014100 GTP-binding protein Obg/CgtA AC028_12330 IPR002583 Ribosomal protein S20 AC028_12330 IPR036510 Ribosomal protein S20 superfamily AC028_12335 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_12340 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AC028_12340 IPR023468 Riboflavin kinase AC028_12340 IPR015864 FAD synthetase AC028_12340 IPR023465 Riboflavin kinase domain superfamily AC028_12340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_12340 IPR002606 Riboflavin kinase, bacterial AC028_12345 IPR002300 Aminoacyl-tRNA synthetase, class Ia AC028_12345 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AC028_12345 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_12345 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain AC028_12345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_12345 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AC028_12345 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_12345 IPR023585 Isoleucine-tRNA ligase, type 1 AC028_12345 IPR002301 Isoleucine-tRNA ligase AC028_12345 IPR010663 Zinc finger, FPG/IleRS-type AC028_12350 IPR001872 Peptidase A8, signal peptidase II AC028_12355 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AC028_12385 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain AC028_12385 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AC028_12385 IPR010514 COX aromatic rich motif AC028_12385 IPR008972 Cupredoxin AC028_12385 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AC028_12385 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AC028_12385 IPR006333 Cytochrome o ubiquinol oxidase subunit II AC028_12390 IPR023616 Cytochrome c oxidase-like, subunit I domain AC028_12390 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AC028_12390 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AC028_12390 IPR014207 Cytochrome o ubiquinol oxidase, subunit I AC028_12390 IPR000883 Cytochrome c oxidase subunit I AC028_12395 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AC028_12395 IPR000298 Cytochrome c oxidase subunit III-like AC028_12395 IPR014206 Cytochrome o ubiquinol oxidase, subunit III AC028_12395 IPR033946 Ubiquinol oxidase subunit III domain AC028_12395 IPR024791 Cytochrome c oxidase subunit III AC028_12395 IPR035973 Cytochrome c oxidase subunit III-like superfamily AC028_12400 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes AC028_12400 IPR014210 Cytochrome o ubiquinol oxidase subunit IV AC028_12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12410 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AC028_12410 IPR004504 DNA repair protein RadA AC028_12410 IPR003593 AAA+ ATPase domain AC028_12410 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_12410 IPR041166 LapB, rubredoxin metal binding domain AC028_12410 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_12415 IPR008523 Protein of unknown function DUF805 AC028_12425 IPR018060 DNA binding HTH domain, AraC-type AC028_12425 IPR018062 HTH domain AraC-type, conserved site AC028_12430 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_12430 IPR020575 Heat shock protein Hsp90, N-terminal AC028_12430 IPR001404 Heat shock protein Hsp90 family AC028_12430 IPR037196 HSP90, C-terminal domain AC028_12430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12430 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12440 IPR036513 STAS domain superfamily AC028_12440 IPR002645 STAS domain AC028_12440 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain AC028_12440 IPR012292 Globin/Protoglobin AC028_12445 IPR002645 STAS domain AC028_12445 IPR036513 STAS domain superfamily AC028_12450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12450 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12460 IPR011006 CheY-like superfamily AC028_12460 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12460 IPR003660 HAMP domain AC028_12460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12460 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_12460 IPR001789 Signal transduction response regulator, receiver domain AC028_12460 IPR036641 HPT domain superfamily AC028_12460 IPR005467 Histidine kinase domain AC028_12460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12460 IPR033414 Periplasmic sensor domain AC028_12460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12465 IPR000014 PAS domain AC028_12465 IPR035965 PAS domain superfamily AC028_12465 IPR013656 PAS fold-4 AC028_12465 IPR001789 Signal transduction response regulator, receiver domain AC028_12465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12465 IPR005467 Histidine kinase domain AC028_12465 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12465 IPR011006 CheY-like superfamily AC028_12465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12470 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_12470 IPR006710 Glycoside hydrolase, family 43 AC028_12470 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain AC028_12470 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AC028_12475 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_12475 IPR010105 TonB-dependent siderophore receptor AC028_12475 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_12475 IPR039426 Vitamin B12 transporter BtuB-like AC028_12475 IPR012910 TonB-dependent receptor, plug domain AC028_12480 IPR013766 Thioredoxin domain AC028_12480 IPR005746 Thioredoxin AC028_12480 IPR036249 Thioredoxin-like superfamily AC028_12480 IPR017937 Thioredoxin, conserved site AC028_12485 IPR009874 Protein of unknown function DUF1428 AC028_12485 IPR011008 Dimeric alpha-beta barrel AC028_12495 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12495 IPR029016 GAF-like domain superfamily AC028_12495 IPR003018 GAF domain AC028_12495 IPR005467 Histidine kinase domain AC028_12495 IPR038318 KdpD, transmembrane domain superfamily AC028_12495 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12495 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12495 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal AC028_12495 IPR025201 Sensor protein KdpD, transmembrane domain AC028_12495 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12500 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_12500 IPR035909 Methylesterase CheB, C-terminal AC028_12505 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_12505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_12505 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_12505 IPR000780 MCP methyltransferase, CheR-type AC028_12510 IPR005467 Histidine kinase domain AC028_12510 IPR011006 CheY-like superfamily AC028_12510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12510 IPR019247 Histidine kinase BarA, N-terminal AC028_12510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12510 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12510 IPR003660 HAMP domain AC028_12510 IPR001789 Signal transduction response regulator, receiver domain AC028_12510 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_12510 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12510 IPR036641 HPT domain superfamily AC028_12515 IPR003594 Histidine kinase/HSP90-like ATPase AC028_12515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_12515 IPR005467 Histidine kinase domain AC028_12515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_12515 IPR001789 Signal transduction response regulator, receiver domain AC028_12515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_12515 IPR035965 PAS domain superfamily AC028_12515 IPR000014 PAS domain AC028_12515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_12515 IPR001610 PAC motif AC028_12515 IPR011006 CheY-like superfamily AC028_12515 IPR000700 PAS-associated, C-terminal AC028_12520 IPR011006 CheY-like superfamily AC028_12520 IPR001789 Signal transduction response regulator, receiver domain AC028_12530 IPR013780 Glycosyl hydrolase, all-beta AC028_12530 IPR017853 Glycoside hydrolase superfamily AC028_12530 IPR010720 Alpha-L-arabinofuranosidase, C-terminal AC028_12540 IPR014718 Glycoside hydrolase-type carbohydrate-binding AC028_12540 IPR011013 Galactose mutarotase-like domain superfamily AC028_12540 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AC028_12540 IPR015443 Aldose 1-epimerase AC028_12540 IPR018052 Aldose 1-epimerase, conserved site AC028_12545 IPR002541 Cytochrome c assembly protein AC028_12545 IPR017562 Cytochrome c-type biogenesis protein CcsA AC028_12550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12550 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AC028_12550 IPR004780 Signal recognition particle protein AC028_12550 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AC028_12550 IPR013822 Signal recognition particle SRP54, helical bundle AC028_12550 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AC028_12550 IPR022941 Signal recognition particle, SRP54 subunit AC028_12550 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AC028_12550 IPR003593 AAA+ ATPase domain AC028_12560 IPR013785 Aldolase-type TIM barrel AC028_12560 IPR004136 Nitronate monooxygenase AC028_12565 IPR001544 Aminotransferase class IV AC028_12565 IPR018300 Aminotransferase, class IV, conserved site AC028_12565 IPR036038 Aminotransferase-like, PLP-dependent enzymes AC028_12565 IPR033939 Branched-chain aminotransferase AC028_12565 IPR005785 Branched-chain amino acid aminotransferase I AC028_12570 IPR023803 Ribosomal protein S16 domain superfamily AC028_12570 IPR020592 Ribosomal protein S16, conserved site AC028_12570 IPR000307 Ribosomal protein S16 AC028_12575 IPR027275 PRC-barrel domain AC028_12575 IPR011033 PRC-barrel-like superfamily AC028_12575 IPR002676 RimM, N-terminal AC028_12575 IPR036976 RimM, N-terminal domain superfamily AC028_12575 IPR009000 Translation protein, beta-barrel domain superfamily AC028_12575 IPR011961 16S rRNA processing protein RimM AC028_12580 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_12580 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AC028_12580 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AC028_12580 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AC028_12580 IPR029028 Alpha/beta knot methyltransferases AC028_12585 IPR038657 Ribosomal protein L19 superfamily AC028_12585 IPR001857 Ribosomal protein L19 AC028_12585 IPR018257 Ribosomal protein L19, conserved site AC028_12585 IPR008991 Translation protein SH3-like domain superfamily AC028_12590 IPR002528 Multi antimicrobial extrusion protein AC028_12610 IPR036986 RNA-binding S4 domain superfamily AC028_12610 IPR002942 RNA-binding S4 domain AC028_12610 IPR025708 Heat shock protein 15 AC028_12615 IPR019793 Peroxidases heam-ligand binding site AC028_12615 IPR019794 Peroxidase, active site AC028_12615 IPR000763 Catalase-peroxidase haem AC028_12615 IPR002016 Haem peroxidase AC028_12615 IPR010255 Haem peroxidase superfamily AC028_12625 IPR017261 DNA mismatch repair protein MutS/MSH AC028_12625 IPR000432 DNA mismatch repair protein MutS, C-terminal AC028_12625 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AC028_12625 IPR005748 DNA mismatch repair protein MutS AC028_12625 IPR007861 DNA mismatch repair protein MutS, clamp AC028_12625 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AC028_12625 IPR016151 DNA mismatch repair protein MutS, N-terminal AC028_12625 IPR007696 DNA mismatch repair protein MutS, core AC028_12625 IPR007860 DNA mismatch repair protein MutS, connector domain AC028_12625 IPR036678 MutS, connector domain superfamily AC028_12625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12635 IPR004981 Tryptophan 2,3-dioxygenase AC028_12635 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like AC028_12650 IPR036291 NAD(P)-binding domain superfamily AC028_12650 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_12650 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_12675 IPR023232 Glycoside hydrolase, family 2, active site AC028_12675 IPR006101 Glycoside hydrolase, family 2 AC028_12675 IPR040605 Glycoside hydrolase family 2, domain 5 AC028_12675 IPR008979 Galactose-binding-like domain superfamily AC028_12675 IPR008964 Invasin/intimin cell-adhesion fragments AC028_12675 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AC028_12675 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AC028_12675 IPR006103 Glycoside hydrolase family 2, catalytic domain AC028_12675 IPR032311 Domain of unknown function DUF4982 AC028_12675 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AC028_12675 IPR013783 Immunoglobulin-like fold AC028_12675 IPR017853 Glycoside hydrolase superfamily AC028_12680 IPR017853 Glycoside hydrolase superfamily AC028_12680 IPR011683 Glycosyl hydrolase family 53 AC028_12690 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AC028_12690 IPR026281 HTH-type transcriptional regulator RamB AC028_12690 IPR001387 Cro/C1-type helix-turn-helix domain AC028_12690 IPR010359 IrrE N-terminal-like domain AC028_12690 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_12695 IPR016161 Aldehyde/histidinol dehydrogenase AC028_12695 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_12695 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_12695 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_12695 IPR015590 Aldehyde dehydrogenase domain AC028_12695 IPR010061 Methylmalonate-semialdehyde dehydrogenase AC028_12700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_12700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_12700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_12700 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_12700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_12700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_12700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_12705 IPR001753 Enoyl-CoA hydratase/isomerase AC028_12705 IPR014748 Enoyl-CoA hydratase, C-terminal AC028_12705 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_12705 IPR029045 ClpP/crotonase-like domain superfamily AC028_12710 IPR001753 Enoyl-CoA hydratase/isomerase AC028_12710 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_12710 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AC028_12710 IPR029045 ClpP/crotonase-like domain superfamily AC028_12710 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AC028_12710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_12710 IPR036291 NAD(P)-binding domain superfamily AC028_12710 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AC028_12710 IPR012802 Fatty oxidation complex, alpha subunit FadJ AC028_12715 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AC028_12715 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AC028_12715 IPR036291 NAD(P)-binding domain superfamily AC028_12715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_12715 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AC028_12715 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AC028_12715 IPR011548 3-hydroxyisobutyrate dehydrogenase AC028_12715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_12720 IPR027469 Cation efflux transmembrane domain superfamily AC028_12720 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AC028_12720 IPR002524 Cation efflux protein AC028_12725 IPR012337 Ribonuclease H-like superfamily AC028_12725 IPR001584 Integrase, catalytic core AC028_12725 IPR036397 Ribonuclease H superfamily AC028_12725 IPR025948 HTH-like domain AC028_12730 IPR009057 Homeobox-like domain superfamily AC028_12730 IPR002514 Transposase IS3/IS911family AC028_12740 IPR009057 Homeobox-like domain superfamily AC028_12740 IPR002514 Transposase IS3/IS911family AC028_12740 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_12745 IPR001584 Integrase, catalytic core AC028_12745 IPR025948 HTH-like domain AC028_12745 IPR036397 Ribonuclease H superfamily AC028_12745 IPR012337 Ribonuclease H-like superfamily AC028_12750 IPR002559 Transposase, IS4-like AC028_12750 IPR008490 Transposase InsH, N-terminal AC028_12755 IPR008490 Transposase InsH, N-terminal AC028_12755 IPR002559 Transposase, IS4-like AC028_12770 IPR004276 Glycosyltransferase family 28, N-terminal domain AC028_12775 IPR002656 Acyltransferase 3 AC028_12775 IPR036514 SGNH hydrolase superfamily AC028_12780 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_12780 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_12780 IPR036291 NAD(P)-binding domain superfamily AC028_12795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_12795 IPR008909 DALR anticodon binding AC028_12795 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AC028_12795 IPR001278 Arginine-tRNA ligase AC028_12795 IPR005148 Arginyl tRNA synthetase N-terminal domain AC028_12795 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AC028_12795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_12795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_12800 IPR025657 RadC-like JAB domain AC028_12800 IPR010994 RuvA domain 2-like AC028_12800 IPR037518 MPN domain AC028_12800 IPR001405 Uncharacterised protein family UPF0758 AC028_12800 IPR020891 Uncharacterised protein family UPF0758, conserved site AC028_12805 IPR035929 CoaB-like superfamily AC028_12805 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AC028_12805 IPR003382 Flavoprotein AC028_12805 IPR036551 Flavin prenyltransferase-like AC028_12805 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AC028_12810 IPR033704 dUTPase, trimeric AC028_12810 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AC028_12810 IPR029054 dUTPase-like AC028_12810 IPR036157 dUTPase-like superfamily AC028_12815 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AC028_12815 IPR016066 Alpha-D-phosphohexomutase, conserved site AC028_12815 IPR005841 Alpha-D-phosphohexomutase superfamily AC028_12815 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AC028_12815 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AC028_12815 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AC028_12815 IPR005843 Alpha-D-phosphohexomutase, C-terminal AC028_12815 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AC028_12830 IPR029044 Nucleotide-diphospho-sugar transferases AC028_12830 IPR001173 Glycosyltransferase 2-like AC028_12835 IPR001509 NAD-dependent epimerase/dehydratase AC028_12835 IPR036291 NAD(P)-binding domain superfamily AC028_12850 IPR041468 ParB/Spo0J, HTH domain AC028_12850 IPR003115 ParB/Sulfiredoxin AC028_12850 IPR036086 ParB/Sulfiredoxin superfamily AC028_12850 IPR004437 ParB/RepB/Spo0J partition protein AC028_12855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_12855 IPR025669 AAA domain AC028_12865 IPR000836 Phosphoribosyltransferase domain AC028_12865 IPR023031 Orotate phosphoribosyltransferase AC028_12865 IPR004467 Orotate phosphoribosyl transferase domain AC028_12865 IPR029057 Phosphoribosyltransferase-like AC028_12870 IPR004808 AP endonuclease 1 AC028_12870 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AC028_12870 IPR005135 Endonuclease/exonuclease/phosphatase AC028_12870 IPR020848 AP endonuclease 1, conserved site AC028_12870 IPR020847 AP endonuclease 1, binding site AC028_12875 IPR011701 Major facilitator superfamily AC028_12875 IPR036259 MFS transporter superfamily AC028_12875 IPR020846 Major facilitator superfamily domain AC028_12875 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 AC028_12885 IPR005338 Anhydro-N-acetylmuramic acid kinase AC028_12890 IPR016047 Peptidase M23 AC028_12890 IPR007340 Opacity-associated protein A AC028_12890 IPR011055 Duplicated hybrid motif AC028_12895 IPR002942 RNA-binding S4 domain AC028_12895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_12895 IPR002305 Aminoacyl-tRNA synthetase, class Ic AC028_12895 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AC028_12895 IPR024088 Tyrosine-tRNA ligase, bacterial-type AC028_12895 IPR002307 Tyrosine-tRNA ligase AC028_12895 IPR036986 RNA-binding S4 domain superfamily AC028_12895 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_12925 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_12925 IPR016161 Aldehyde/histidinol dehydrogenase AC028_12925 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AC028_12925 IPR025703 Bifunctional protein PutA AC028_12925 IPR024089 Proline dehydrogenase PutA, domain I/II AC028_12925 IPR013321 Arc-type ribbon-helix-helix AC028_12925 IPR010985 Ribbon-helix-helix AC028_12925 IPR002872 Proline dehydrogenase domain AC028_12925 IPR024082 Proline dehydrogenase PutA, domain II AC028_12925 IPR015590 Aldehyde dehydrogenase domain AC028_12925 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_12925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AC028_12925 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_12925 IPR029041 FAD-linked oxidoreductase-like AC028_12925 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain AC028_12925 IPR024090 Proline dehydrogenase PutA, domain I AC028_12935 IPR014222 Cytochrome c oxidase, subunit II AC028_12935 IPR005728 Rickettsial palindromic element AC028_12935 IPR001505 Copper centre Cu(A) AC028_12935 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AC028_12935 IPR034210 Cytochrome c oxidase subunit 2, C-terminal AC028_12935 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AC028_12935 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AC028_12935 IPR008972 Cupredoxin AC028_12940 IPR000883 Cytochrome c oxidase subunit I AC028_12940 IPR014241 Cytochrome c oxidase, subunit I bacterial type AC028_12940 IPR033944 Cytochrome c oxidase subunit I domain AC028_12940 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AC028_12940 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AC028_12940 IPR023616 Cytochrome c oxidase-like, subunit I domain AC028_12950 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily AC028_12950 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 AC028_12955 IPR024791 Cytochrome c oxidase subunit III AC028_12955 IPR035973 Cytochrome c oxidase subunit III-like superfamily AC028_12955 IPR000298 Cytochrome c oxidase subunit III-like AC028_12955 IPR033945 Cytochrome c oxidase subunit III domain AC028_12955 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AC028_12980 IPR006369 Protohaem IX farnesyltransferase AC028_12980 IPR030470 UbiA prenyltransferase conserved site AC028_12980 IPR000537 UbiA prenyltransferase family AC028_12990 IPR016833 Putative sodium bile acid cotransporter AC028_12990 IPR038770 Sodium/solute symporter superfamily AC028_12995 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AC028_12995 IPR006295 DNA primase, DnaG AC028_12995 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AC028_12995 IPR019475 DNA primase, DnaB-helicase binding domain AC028_12995 IPR013264 DNA primase, catalytic core, N-terminal AC028_12995 IPR013173 DNA primase DnaG, DnaB-binding domain AC028_12995 IPR036977 DNA Primase, CHC2-type zinc finger AC028_12995 IPR030846 DNA primase DnaG, bacteria AC028_12995 IPR002694 Zinc finger, CHC2-type AC028_12995 IPR006171 TOPRIM domain AC028_12995 IPR034151 Bacterial DnaG primase, TOPRIM domain AC028_13000 IPR023679 Uncharacterised protein family UPF0761, bacterial AC028_13000 IPR017039 Virulence factor BrkB AC028_13005 IPR042184 YqeY/Aim41, N-terminal domain AC028_13005 IPR019004 Uncharacterised protein YqeY/Aim41 AC028_13005 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AC028_13005 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AC028_13010 IPR018278 Ribosomal protein S21, conserved site AC028_13010 IPR001911 Ribosomal protein S21 AC028_13010 IPR038380 Ribosomal protein S21 superfamily AC028_13015 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AC028_13015 IPR017861 Kae1/TsaD family AC028_13015 IPR000905 Gcp-like domain AC028_13015 IPR017860 Peptidase M22, conserved site AC028_13020 IPR006156 Dihydroneopterin aldolase AC028_13020 IPR006157 Dihydroneopterin aldolase/epimerase domain AC028_13025 IPR026891 Fibronectin type III-like domain AC028_13025 IPR019800 Glycoside hydrolase, family 3, active site AC028_13025 IPR002772 Glycoside hydrolase family 3 C-terminal domain AC028_13025 IPR013783 Immunoglobulin-like fold AC028_13025 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AC028_13025 IPR001764 Glycoside hydrolase, family 3, N-terminal AC028_13025 IPR017853 Glycoside hydrolase superfamily AC028_13025 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AC028_13030 IPR012938 Glucose/Sorbosone dehydrogenase AC028_13030 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AC028_13030 IPR011042 Six-bladed beta-propeller, TolB-like AC028_13035 IPR038972 Inner membrane protein YiaA-like AC028_13035 IPR008024 YiaAB two helix AC028_13050 IPR002293 Amino acid/polyamine transporter I AC028_13050 IPR004754 Amino acid antiporter AC028_13060 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_13060 IPR034603 Dipeptide epimerase AC028_13060 IPR036849 Enolase-like, C-terminal domain superfamily AC028_13060 IPR029017 Enolase-like, N-terminal AC028_13060 IPR029065 Enolase C-terminal domain-like AC028_13060 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AC028_13060 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_13070 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AC028_13070 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AC028_13070 IPR036365 PGBD-like superfamily AC028_13070 IPR036366 PGBD superfamily AC028_13075 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily AC028_13075 IPR000755 D-alanyl-D-alanine dipeptidase AC028_13120 IPR009770 Domain of unknown function DUF1338 AC028_13135 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_13135 IPR023931 Multidrug resistance protein MdtC AC028_13135 IPR001036 Acriflavin resistance protein AC028_13140 IPR001036 Acriflavin resistance protein AC028_13140 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_13140 IPR022831 Multidrug resistance protein MdtB AC028_13145 IPR022824 Multidrug resistance protein MdtA AC028_13145 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_13145 IPR006143 RND efflux pump, membrane fusion protein AC028_13150 IPR002933 Peptidase M20 AC028_13150 IPR011650 Peptidase M20, dimerisation domain AC028_13150 IPR036264 Bacterial exopeptidase dimerisation domain AC028_13150 IPR017439 Amidohydrolase AC028_13155 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AC028_13155 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AC028_13155 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AC028_13170 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric AC028_13180 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13180 IPR005119 LysR, substrate-binding AC028_13180 IPR036390 Winged helix DNA-binding domain superfamily AC028_13180 IPR000847 Transcription regulator HTH, LysR AC028_13185 IPR010452 Isocitrate dehydrogenase kinasephosphatase AC028_13190 IPR011129 Cold shock domain AC028_13190 IPR012340 Nucleic acid-binding, OB-fold AC028_13190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13190 IPR003593 AAA+ ATPase domain AC028_13190 IPR041703 Transcription termination factor Rho, ATP binding domain AC028_13190 IPR011112 Rho termination factor, N-terminal AC028_13190 IPR011113 Rho termination factor, RNA-binding domain AC028_13190 IPR004665 Transcription termination factor Rho AC028_13190 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AC028_13195 IPR013766 Thioredoxin domain AC028_13195 IPR017937 Thioredoxin, conserved site AC028_13195 IPR005746 Thioredoxin AC028_13195 IPR036249 Thioredoxin-like superfamily AC028_13200 IPR014014 RNA helicase, DEAD-box type, Q motif AC028_13200 IPR011545 DEAD/DEAH box helicase domain AC028_13200 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_13200 IPR001650 Helicase, C-terminal AC028_13200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13200 IPR022077 ATP-dependent RNA helicase RhlB AC028_13200 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_13200 IPR023554 ATP-dependent RNA helicase RhlB type AC028_13205 IPR003439 ABC transporter-like AC028_13205 IPR017871 ABC transporter, conserved site AC028_13205 IPR003593 AAA+ ATPase domain AC028_13205 IPR005286 Cell division protein FtsE, ATP-binding AC028_13205 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13210 IPR040690 FtsX, extracellular domain AC028_13210 IPR004513 Cell division protein FtsX AC028_13215 IPR035909 Methylesterase CheB, C-terminal AC028_13215 IPR011006 CheY-like superfamily AC028_13215 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_13215 IPR001789 Signal transduction response regulator, receiver domain AC028_13215 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AC028_13220 IPR018085 Uracil-DNA glycosylase, active site AC028_13220 IPR005122 Uracil-DNA glycosylase-like AC028_13220 IPR002043 Uracil-DNA glycosylase family 1 AC028_13220 IPR036895 Uracil-DNA glycosylase-like domain superfamily AC028_13225 IPR007627 RNA polymerase sigma-70 region 2 AC028_13225 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13225 IPR014284 RNA polymerase sigma-70 like domain AC028_13225 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_13225 IPR013325 RNA polymerase sigma factor, region 2 AC028_13225 IPR007630 RNA polymerase sigma-70 region 4 AC028_13225 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AC028_13225 IPR000943 RNA polymerase sigma-70 AC028_13230 IPR005115 Uncharacterised domain UPF0126 AC028_13235 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_13235 IPR023753 FAD/NAD(P)-binding domain AC028_13250 IPR010987 Glutathione S-transferase, C-terminal-like AC028_13250 IPR036249 Thioredoxin-like superfamily AC028_13250 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_13250 IPR004045 Glutathione S-transferase, N-terminal AC028_13250 IPR004046 Glutathione S-transferase, C-terminal AC028_13275 IPR002528 Multi antimicrobial extrusion protein AC028_13280 IPR004634 Peptidase S49, protease IV AC028_13280 IPR029045 ClpP/crotonase-like domain superfamily AC028_13280 IPR004635 Peptidase S49, SppA AC028_13280 IPR002142 Peptidase S49 AC028_13280 IPR033854 Signal peptide peptidase A AC028_13295 IPR036291 NAD(P)-binding domain superfamily AC028_13295 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_13295 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_13310 IPR006070 YrdC-like domain AC028_13310 IPR023535 Threonylcarbamoyl-AMP synthase AC028_13310 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AC028_13315 IPR000380 DNA topoisomerase, type IA AC028_13315 IPR023406 DNA topoisomerase, type IA, active site AC028_13315 IPR013497 DNA topoisomerase, type IA, central AC028_13315 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AC028_13315 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AC028_13315 IPR003601 DNA topoisomerase, type IA, domain 2 AC028_13315 IPR023405 DNA topoisomerase, type IA, core domain AC028_13315 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AC028_13315 IPR005733 DNA topoisomerase I, bacterial-type AC028_13315 IPR028612 DNA topoisomerase I, type IA AC028_13315 IPR034149 DNA topoisomerase 1, TOPRIM domain AC028_13315 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AC028_13315 IPR006171 TOPRIM domain AC028_13315 IPR025589 Topoisomerase C-terminal repeat AC028_13325 IPR001082 Fimbrial protein pilin AC028_13325 IPR012902 Prokaryotic N-terminal methylation site AC028_13330 IPR007456 Smg AC028_13335 IPR041614 DprA, winged helix domain AC028_13335 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13335 IPR003488 DNA recombination-mediator protein A AC028_13340 IPR036779 LysM domain superfamily AC028_13340 IPR018392 LysM domain AC028_13345 IPR036821 Peptide deformylase superfamily AC028_13345 IPR023635 Peptide deformylase AC028_13350 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AC028_13350 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AC028_13350 IPR002376 Formyl transferase, N-terminal AC028_13350 IPR011034 Formyl transferase-like, C-terminal domain superfamily AC028_13350 IPR036477 Formyl transferase, N-terminal domain superfamily AC028_13350 IPR037022 Formyl transferase, C-terminal domain superfamily AC028_13350 IPR005793 Formyl transferase, C-terminal AC028_13350 IPR005794 Methionyl-tRNA formyltransferase AC028_13355 IPR004573 rRNA small subunit methyltransferase B AC028_13355 IPR023267 RNA (C5-cytosine) methyltransferase AC028_13355 IPR006027 NusB/RsmB/TIM44 AC028_13355 IPR035926 NusB-like superfamily AC028_13355 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AC028_13355 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AC028_13355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_13370 IPR001173 Glycosyltransferase 2-like AC028_13370 IPR029044 Nucleotide-diphospho-sugar transferases AC028_13390 IPR036144 RibA-like superfamily AC028_13390 IPR032677 GTP cyclohydrolase II AC028_13390 IPR000926 GTP cyclohydrolase II, RibA AC028_13400 IPR000182 GNAT domain AC028_13400 IPR016181 Acyl-CoA N-acyltransferase AC028_13405 IPR004960 Bacterial lipid A biosynthesis acyltransferase AC028_13405 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AC028_13405 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP AC028_13410 IPR003732 D-aminoacyl-tRNA deacylase DTD AC028_13410 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AC028_13415 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AC028_13415 IPR007127 RNA polymerase sigma factor 70, region 1.1 AC028_13415 IPR007624 RNA polymerase sigma-70 region 3 AC028_13415 IPR007627 RNA polymerase sigma-70 region 2 AC028_13415 IPR042189 Sigma-70 factor, region 1.1 superfamily AC028_13415 IPR007630 RNA polymerase sigma-70 region 4 AC028_13415 IPR014284 RNA polymerase sigma-70 like domain AC028_13415 IPR013325 RNA polymerase sigma factor, region 2 AC028_13415 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_13415 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13415 IPR028630 RNA polymerase sigma factor RpoD AC028_13415 IPR000943 RNA polymerase sigma-70 AC028_13415 IPR009042 RNA polymerase sigma-70 region 1.2 AC028_13415 IPR007631 RNA polymerase sigma factor 70, non-essential domain AC028_13430 IPR035069 TTHA1013/TTHA0281-like AC028_13430 IPR010998 Integrase/recombinase, N-terminal AC028_13430 IPR002104 Integrase, catalytic domain AC028_13430 IPR013762 Integrase-like, catalytic domain superfamily AC028_13430 IPR011010 DNA breaking-rejoining enzyme, catalytic core AC028_13445 IPR025948 HTH-like domain AC028_13445 IPR001584 Integrase, catalytic core AC028_13445 IPR012337 Ribonuclease H-like superfamily AC028_13445 IPR036397 Ribonuclease H superfamily AC028_13450 IPR009057 Homeobox-like domain superfamily AC028_13450 IPR002514 Transposase IS3/IS911family AC028_13450 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_13460 IPR003356 DNA methylase, adenine-specific AC028_13480 IPR002514 Transposase IS3/IS911family AC028_13480 IPR009057 Homeobox-like domain superfamily AC028_13485 IPR012337 Ribonuclease H-like superfamily AC028_13485 IPR025948 HTH-like domain AC028_13485 IPR001584 Integrase, catalytic core AC028_13485 IPR036397 Ribonuclease H superfamily AC028_13555 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13555 IPR009057 Homeobox-like domain superfamily AC028_13555 IPR002514 Transposase IS3/IS911family AC028_13560 IPR036397 Ribonuclease H superfamily AC028_13560 IPR012337 Ribonuclease H-like superfamily AC028_13560 IPR001584 Integrase, catalytic core AC028_13560 IPR025948 HTH-like domain AC028_13565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_13565 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_13565 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_13565 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_13565 IPR004090 Chemotaxis methyl-accepting receptor AC028_13565 IPR003660 HAMP domain AC028_13580 IPR006175 YjgF/YER057c/UK114 family AC028_13580 IPR035959 RutC-like superfamily AC028_13580 IPR038743 YjgH-like AC028_13585 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13585 IPR000847 Transcription regulator HTH, LysR AC028_13585 IPR005119 LysR, substrate-binding AC028_13585 IPR036390 Winged helix DNA-binding domain superfamily AC028_13595 IPR017871 ABC transporter, conserved site AC028_13595 IPR003439 ABC transporter-like AC028_13595 IPR003593 AAA+ ATPase domain AC028_13595 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13610 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_13610 IPR012910 TonB-dependent receptor, plug domain AC028_13610 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_13610 IPR039423 TonB-dependent receptor-like AC028_13610 IPR010105 TonB-dependent siderophore receptor AC028_13610 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_13655 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_13655 IPR027399 Alcohol dehydrogenase GroES-associated AC028_13655 IPR013149 Alcohol dehydrogenase, C-terminal AC028_13655 IPR011032 GroES-like superfamily AC028_13655 IPR013154 Alcohol dehydrogenase, N-terminal AC028_13655 IPR036291 NAD(P)-binding domain superfamily AC028_13670 IPR003593 AAA+ ATPase domain AC028_13670 IPR011527 ABC transporter type 1, transmembrane domain AC028_13670 IPR003439 ABC transporter-like AC028_13670 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_13670 IPR017871 ABC transporter, conserved site AC028_13670 IPR039421 Type I protein exporter AC028_13670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13680 IPR015899 UDP-galactopyranose mutase, C-terminal AC028_13680 IPR004379 UDP-galactopyranose mutase AC028_13690 IPR005886 UDP-glucose 4-epimerase AC028_13690 IPR036291 NAD(P)-binding domain superfamily AC028_13690 IPR016040 NAD(P)-binding domain AC028_13695 IPR036291 NAD(P)-binding domain superfamily AC028_13695 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_13695 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_13710 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AC028_13715 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AC028_13725 IPR025944 Sigma-54 interaction domain, conserved site AC028_13725 IPR010114 DNA-binding transcriptional regulator NtrC AC028_13725 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_13725 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_13725 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_13725 IPR001789 Signal transduction response regulator, receiver domain AC028_13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13725 IPR002197 DNA binding HTH domain, Fis-type AC028_13725 IPR009057 Homeobox-like domain superfamily AC028_13725 IPR003593 AAA+ ATPase domain AC028_13725 IPR011006 CheY-like superfamily AC028_13740 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_13740 IPR035909 Methylesterase CheB, C-terminal AC028_13740 IPR000780 MCP methyltransferase, CheR-type AC028_13740 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_13740 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_13740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_13740 IPR000014 PAS domain AC028_13740 IPR035965 PAS domain superfamily AC028_13740 IPR013656 PAS fold-4 AC028_13760 IPR009078 Ferritin-like superfamily AC028_13760 IPR012347 Ferritin-like AC028_13760 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain AC028_13760 IPR027407 Manganese catalase, C-terminal AC028_13760 IPR007760 Manganese catalase AC028_13765 IPR012347 Ferritin-like AC028_13765 IPR010287 Domain of unknown function DUF892 AC028_13765 IPR009078 Ferritin-like superfamily AC028_13780 IPR033479 Double Cache domain 1 AC028_13780 IPR003660 HAMP domain AC028_13780 IPR003594 Histidine kinase/HSP90-like ATPase AC028_13780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_13780 IPR005467 Histidine kinase domain AC028_13780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_13780 IPR010559 Signal transduction histidine kinase, internal region AC028_13785 IPR011006 CheY-like superfamily AC028_13785 IPR007492 LytTR DNA-binding domain AC028_13785 IPR001789 Signal transduction response regulator, receiver domain AC028_13795 IPR002293 Amino acid/polyamine transporter I AC028_13810 IPR000718 Peptidase M13 AC028_13810 IPR042089 Peptidase M13, domain 2 AC028_13810 IPR008753 Peptidase M13, N-terminal domain AC028_13810 IPR024079 Metallopeptidase, catalytic domain superfamily AC028_13810 IPR018497 Peptidase M13, C-terminal domain AC028_13820 IPR020471 Aldo/keto reductase AC028_13820 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_13820 IPR023210 NADP-dependent oxidoreductase domain AC028_13825 IPR005025 NADPH-dependent FMN reductase-like AC028_13825 IPR029039 Flavoprotein-like superfamily AC028_13825 IPR008254 Flavodoxin/nitric oxide synthase AC028_13830 IPR036390 Winged helix DNA-binding domain superfamily AC028_13830 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13830 IPR005119 LysR, substrate-binding AC028_13830 IPR000847 Transcription regulator HTH, LysR AC028_13840 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AC028_13840 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AC028_13850 IPR005122 Uracil-DNA glycosylase-like AC028_13850 IPR005273 Uracil-DNA glycosylase family 4 AC028_13850 IPR036895 Uracil-DNA glycosylase-like domain superfamily AC028_13855 IPR000782 FAS1 domain AC028_13855 IPR036378 FAS1 domain superfamily AC028_13860 IPR038770 Sodium/solute symporter superfamily AC028_13860 IPR018422 Cation/H+ exchanger, CPA1 family AC028_13860 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria AC028_13860 IPR006153 Cation/H+ exchanger AC028_13865 IPR003593 AAA+ ATPase domain AC028_13865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_13865 IPR017871 ABC transporter, conserved site AC028_13865 IPR003439 ABC transporter-like AC028_13870 IPR000412 ABC-2 transporter AC028_13870 IPR013525 ABC-2 type transporter AC028_13895 IPR006665 OmpA-like domain AC028_13895 IPR025713 Motility protein B, N-terminal domain AC028_13895 IPR036737 OmpA-like domain superfamily AC028_13900 IPR022522 Flagellar motor stator, MotA AC028_13900 IPR000540 Flagellar motor protein MotA, conserved site AC028_13900 IPR002898 MotA/TolQ/ExbB proton channel AC028_13910 IPR011057 Mss4-like superfamily AC028_13910 IPR002579 Peptide methionine sulphoxide reductase MrsB AC028_13910 IPR028427 Peptide methionine sulfoxide reductase AC028_13920 IPR011991 ArsR-like helix-turn-helix domain AC028_13920 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_13920 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AC028_13920 IPR019888 Transcription regulator AsnC-type AC028_13920 IPR011008 Dimeric alpha-beta barrel AC028_13920 IPR000485 AsnC-type HTH domain AC028_13920 IPR036390 Winged helix DNA-binding domain superfamily AC028_13920 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_13925 IPR023080 D-amino acid dehydrogenase DadA AC028_13925 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_13925 IPR006076 FAD dependent oxidoreductase AC028_13930 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AC028_13930 IPR029066 PLP-binding barrel AC028_13930 IPR011079 Alanine racemase, C-terminal AC028_13930 IPR000821 Alanine racemase AC028_13930 IPR001608 Alanine racemase, N-terminal AC028_13930 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AC028_13950 IPR005467 Histidine kinase domain AC028_13950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_13950 IPR003594 Histidine kinase/HSP90-like ATPase AC028_13950 IPR013767 PAS fold AC028_13950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_13950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_13950 IPR000014 PAS domain AC028_13950 IPR035965 PAS domain superfamily AC028_13950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_13960 IPR011042 Six-bladed beta-propeller, TolB-like AC028_13960 IPR012938 Glucose/Sorbosone dehydrogenase AC028_13960 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AC028_13970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_13970 IPR023543 rRNA small subunit methyltransferase C AC028_13970 IPR013675 Methyltransferase small, N-terminal AC028_13970 IPR007848 Methyltransferase small domain AC028_13970 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_13975 IPR036986 RNA-binding S4 domain superfamily AC028_13975 IPR002942 RNA-binding S4 domain AC028_13975 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AC028_13975 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_13975 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AC028_13975 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AC028_13975 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_13980 IPR036412 HAD-like superfamily AC028_13980 IPR006439 HAD hydrolase, subfamily IA AC028_13980 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AC028_13980 IPR023214 HAD superfamily AC028_13980 IPR041492 Haloacid dehalogenase-like hydrolase AC028_13985 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_13985 IPR036291 NAD(P)-binding domain superfamily AC028_13985 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_14005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_14005 IPR003594 Histidine kinase/HSP90-like ATPase AC028_14005 IPR011006 CheY-like superfamily AC028_14005 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_14005 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AC028_14005 IPR005467 Histidine kinase domain AC028_14005 IPR013767 PAS fold AC028_14005 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB AC028_14005 IPR001789 Signal transduction response regulator, receiver domain AC028_14005 IPR036641 HPT domain superfamily AC028_14005 IPR040642 Histidine kinase receptor ArcB, transmembrane domain AC028_14005 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_14005 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_14005 IPR000014 PAS domain AC028_14005 IPR000700 PAS-associated, C-terminal AC028_14005 IPR035965 PAS domain superfamily AC028_14005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_14015 IPR036183 YajQ-like superfamily AC028_14015 IPR035570 UPF0234, N-terminal AC028_14015 IPR035571 UPF0234-like, C-terminal AC028_14015 IPR007551 Protein of unknown function DUF520 AC028_14020 IPR000620 EamA domain AC028_14025 IPR018449 NIL domain AC028_14025 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain AC028_14025 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal AC028_14025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14025 IPR017871 ABC transporter, conserved site AC028_14025 IPR003439 ABC transporter-like AC028_14025 IPR026253 Methionine import ATP-binding protein MetN AC028_14025 IPR003593 AAA+ ATPase domain AC028_14030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_14030 IPR035906 MetI-like superfamily AC028_14035 IPR004872 Lipoprotein NlpA family AC028_14055 IPR002559 Transposase, IS4-like AC028_14055 IPR008490 Transposase InsH, N-terminal AC028_14075 IPR004167 Peripheral subunit-binding domain AC028_14075 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AC028_14075 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AC028_14075 IPR011053 Single hybrid motif AC028_14075 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AC028_14075 IPR000089 Biotin/lipoyl attachment AC028_14075 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AC028_14075 IPR036625 E3-binding domain superfamily AC028_14085 IPR006258 Dihydrolipoamide dehydrogenase AC028_14085 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AC028_14085 IPR023753 FAD/NAD(P)-binding domain AC028_14085 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_14085 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AC028_14085 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AC028_14085 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC028_14105 IPR035908 ATP synthase, F0 complex, subunit A superfamily AC028_14105 IPR023011 ATP synthase, F0 complex, subunit A, active site AC028_14105 IPR000568 ATP synthase, F0 complex, subunit A AC028_14110 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AC028_14110 IPR000454 ATP synthase, F0 complex, subunit C AC028_14110 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast AC028_14110 IPR038662 F1F0 ATP synthase subunit C superfamily AC028_14110 IPR035921 F/V-ATP synthase subunit C superfamily AC028_14110 IPR002379 V-ATPase proteolipid subunit C-like domain AC028_14115 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AC028_14115 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AC028_14115 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AC028_14120 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AC028_14120 IPR000711 ATPase, OSCP/delta subunit AC028_14125 IPR005294 ATP synthase, F1 complex, alpha subunit AC028_14125 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AC028_14125 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AC028_14125 IPR000793 ATP synthase, alpha subunit, C-terminal AC028_14125 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AC028_14125 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AC028_14125 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AC028_14125 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AC028_14125 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AC028_14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14130 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site AC028_14130 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AC028_14130 IPR000131 ATP synthase, F1 complex, gamma subunit AC028_14135 IPR003593 AAA+ ATPase domain AC028_14135 IPR005722 ATP synthase, F1 complex, beta subunit AC028_14135 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AC028_14135 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AC028_14135 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AC028_14135 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AC028_14135 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AC028_14135 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14140 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily AC028_14140 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AC028_14140 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AC028_14140 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AC028_14140 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AC028_14160 IPR025877 MobA-like NTP transferase AC028_14160 IPR018357 Hexapeptide transferase, conserved site AC028_14160 IPR001451 Hexapeptide repeat AC028_14160 IPR038009 GlmU, C-terminal LbH domain AC028_14160 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AC028_14160 IPR011004 Trimeric LpxA-like superfamily AC028_14160 IPR029044 Nucleotide-diphospho-sugar transferases AC028_14165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_14165 IPR003594 Histidine kinase/HSP90-like ATPase AC028_14165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_14165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_14165 IPR005467 Histidine kinase domain AC028_14165 IPR029151 Periplasmic sensor-like domain superfamily AC028_14165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_14170 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_14170 IPR025944 Sigma-54 interaction domain, conserved site AC028_14170 IPR009057 Homeobox-like domain superfamily AC028_14170 IPR011006 CheY-like superfamily AC028_14170 IPR002197 DNA binding HTH domain, Fis-type AC028_14170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14170 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_14170 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_14170 IPR003593 AAA+ ATPase domain AC028_14170 IPR001789 Signal transduction response regulator, receiver domain AC028_14180 IPR025857 MacB-like periplasmic core domain AC028_14180 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14180 IPR003838 ABC transporter permease protein domain AC028_14180 IPR017911 ABC transporter, macrolide export, ATP-binding domain AC028_14180 IPR017871 ABC transporter, conserved site AC028_14180 IPR003439 ABC transporter-like AC028_14180 IPR003593 AAA+ ATPase domain AC028_14185 IPR025857 MacB-like periplasmic core domain AC028_14185 IPR003838 ABC transporter permease protein domain AC028_14185 IPR005085 Carbohydrate binding module family 25 AC028_14190 IPR002559 Transposase, IS4-like AC028_14190 IPR008490 Transposase InsH, N-terminal AC028_14195 IPR003439 ABC transporter-like AC028_14195 IPR017871 ABC transporter, conserved site AC028_14195 IPR003593 AAA+ ATPase domain AC028_14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14200 IPR030190 Macrolide export protein MacA AC028_14200 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_14200 IPR006143 RND efflux pump, membrane fusion protein AC028_14205 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_14205 IPR017932 Glutamine amidotransferase type 2 domain AC028_14205 IPR035466 GlmS/AgaS, SIS domain 1 AC028_14205 IPR035490 GlmS/FrlB, SIS domain 2 AC028_14205 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AC028_14205 IPR001347 Sugar isomerase (SIS) AC028_14230 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_14230 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_14230 IPR004361 Glyoxalase I AC028_14230 IPR037523 Vicinal oxygen chelate (VOC) domain AC028_14230 IPR018146 Glyoxalase I, conserved site AC028_14235 IPR007939 Copper resistance B precursor AC028_14240 IPR011707 Multicopper oxidase, type 3 AC028_14240 IPR006376 Copper-resistance protein CopA AC028_14240 IPR002355 Multicopper oxidase, copper-binding site AC028_14240 IPR008972 Cupredoxin AC028_14240 IPR034284 Copper resistance protein, first cupredoxin domain AC028_14240 IPR034282 Copper resistance protein CopA, second cupredoxin domain AC028_14240 IPR033138 Multicopper oxidases, conserved site AC028_14240 IPR011706 Multicopper oxidase, type 2 AC028_14240 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_14240 IPR001117 Multicopper oxidase, type 1 AC028_14240 IPR034279 Copper resistance protein, third cupredoxin domain AC028_14240 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_14255 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_14255 IPR001567 Peptidase M3A/M3B catalytic domain AC028_14270 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AC028_14270 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AC028_14270 IPR029069 HotDog domain superfamily AC028_14275 IPR001126 UmuC domain AC028_14275 IPR022880 DNA polymerase IV AC028_14275 IPR017961 DNA polymerase, Y-family, little finger domain AC028_14275 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AC028_14280 IPR037512 Phosphoglycolate phosphatase, prokaryotic AC028_14280 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AC028_14280 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AC028_14280 IPR023214 HAD superfamily AC028_14280 IPR041492 Haloacid dehalogenase-like hydrolase AC028_14280 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AC028_14280 IPR006439 HAD hydrolase, subfamily IA AC028_14280 IPR036412 HAD-like superfamily AC028_14285 IPR010917 TonB-dependent receptor, conserved site AC028_14285 IPR010105 TonB-dependent siderophore receptor AC028_14285 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_14285 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_14285 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_14285 IPR012910 TonB-dependent receptor, plug domain AC028_14285 IPR039426 Vitamin B12 transporter BtuB-like AC028_14290 IPR000801 Putative esterase AC028_14290 IPR029058 Alpha/Beta hydrolase fold AC028_14300 IPR029016 GAF-like domain superfamily AC028_14300 IPR000614 Free Met sulfoxide reductase conserved site AC028_14300 IPR003018 GAF domain AC028_14305 IPR004472 Dethiobiotin synthase BioD AC028_14305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14335 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily AC028_14335 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family AC028_14340 IPR012910 TonB-dependent receptor, plug domain AC028_14340 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_14340 IPR039426 Vitamin B12 transporter BtuB-like AC028_14340 IPR010917 TonB-dependent receptor, conserved site AC028_14340 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_14340 IPR010916 TonB box, conserved site AC028_14340 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_14350 IPR011545 DEAD/DEAH box helicase domain AC028_14350 IPR028622 ATP-dependent RNA helicase RhlE AC028_14350 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_14350 IPR014014 RNA helicase, DEAD-box type, Q motif AC028_14350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14350 IPR001650 Helicase, C-terminal AC028_14350 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_14360 IPR036249 Thioredoxin-like superfamily AC028_14360 IPR040079 Glutathione Transferase family AC028_14360 IPR034330 Glutathione S-transferases, class Zeta , C-terminal AC028_14360 IPR005955 Glutathione S-transferases, class Zeta AC028_14360 IPR004046 Glutathione S-transferase, C-terminal AC028_14360 IPR004045 Glutathione S-transferase, N-terminal AC028_14360 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_14360 IPR010987 Glutathione S-transferase, C-terminal-like AC028_14360 IPR034333 Glutathione S-transferases, class Zeta , N-terminal AC028_14365 IPR001482 Type II/IV secretion system protein AC028_14365 IPR006321 Pilus retraction protein PilT AC028_14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14365 IPR003593 AAA+ ATPase domain AC028_14385 IPR000644 CBS domain AC028_14385 IPR005857 Cystathionine beta-synthase AC028_14385 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_14385 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_14390 IPR015424 Pyridoxal phosphate-dependent transferase AC028_14390 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AC028_14390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_14390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_14400 IPR001296 Glycosyl transferase, family 1 AC028_14400 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AC028_14410 IPR003593 AAA+ ATPase domain AC028_14410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14410 IPR003439 ABC transporter-like AC028_14410 IPR017871 ABC transporter, conserved site AC028_14415 IPR000719 Protein kinase domain AC028_14415 IPR025714 Methyltransferase domain AC028_14415 IPR011009 Protein kinase-like domain superfamily AC028_14415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_14425 IPR001296 Glycosyl transferase, family 1 AC028_14425 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AC028_14430 IPR016040 NAD(P)-binding domain AC028_14430 IPR036291 NAD(P)-binding domain superfamily AC028_14430 IPR006368 GDP-mannose 4,6-dehydratase AC028_14435 IPR036291 NAD(P)-binding domain superfamily AC028_14435 IPR016040 NAD(P)-binding domain AC028_14445 IPR009057 Homeobox-like domain superfamily AC028_14445 IPR002514 Transposase IS3/IS911family AC028_14455 IPR025948 HTH-like domain AC028_14455 IPR012337 Ribonuclease H-like superfamily AC028_14455 IPR036397 Ribonuclease H superfamily AC028_14455 IPR001584 Integrase, catalytic core AC028_14460 IPR002514 Transposase IS3/IS911family AC028_14460 IPR009057 Homeobox-like domain superfamily AC028_14480 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AC028_14480 IPR023753 FAD/NAD(P)-binding domain AC028_14480 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_14480 IPR013785 Aldolase-type TIM barrel AC028_14485 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase AC028_14485 IPR036291 NAD(P)-binding domain superfamily AC028_14485 IPR001509 NAD-dependent epimerase/dehydratase AC028_14490 IPR036291 NAD(P)-binding domain superfamily AC028_14490 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_14490 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_14495 IPR036318 FAD-binding, type PCMH-like superfamily AC028_14495 IPR016166 FAD-binding domain, PCMH-type AC028_14495 IPR007173 D-arabinono-1,4-lactone oxidase AC028_14495 IPR006094 FAD linked oxidase, N-terminal AC028_14495 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_14495 IPR016167 FAD-binding, type PCMH, subdomain 1 AC028_14500 IPR023214 HAD superfamily AC028_14500 IPR039653 Prenyltransferase AC028_14500 IPR000537 UbiA prenyltransferase family AC028_14500 IPR036412 HAD-like superfamily AC028_14510 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AC028_14510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_14510 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AC028_14510 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AC028_14510 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AC028_14510 IPR029035 DHS-like NAD/FAD-binding domain superfamily AC028_14510 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AC028_14515 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AC028_14515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_14515 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AC028_14515 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AC028_14515 IPR012255 Electron transfer flavoprotein, beta subunit AC028_14520 IPR005888 dTDP-glucose 4,6-dehydratase AC028_14520 IPR016040 NAD(P)-binding domain AC028_14520 IPR036291 NAD(P)-binding domain superfamily AC028_14525 IPR029044 Nucleotide-diphospho-sugar transferases AC028_14525 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AC028_14525 IPR005835 Nucleotidyl transferase domain AC028_14530 IPR011051 RmlC-like cupin domain superfamily AC028_14530 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AC028_14530 IPR014710 RmlC-like jelly roll fold AC028_14535 IPR005913 dTDP-4-dehydrorhamnose reductase family AC028_14535 IPR036291 NAD(P)-binding domain superfamily AC028_14535 IPR029903 RmlD-like substrate binding domain AC028_14540 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AC028_14540 IPR036291 NAD(P)-binding domain superfamily AC028_14540 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AC028_14540 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AC028_14540 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_14540 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AC028_14540 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AC028_14540 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AC028_14545 IPR014710 RmlC-like jelly roll fold AC028_14545 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AC028_14545 IPR011051 RmlC-like cupin domain superfamily AC028_14545 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AC028_14545 IPR005835 Nucleotidyl transferase domain AC028_14545 IPR029044 Nucleotide-diphospho-sugar transferases AC028_14550 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AC028_14550 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AC028_14550 IPR005843 Alpha-D-phosphohexomutase, C-terminal AC028_14550 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AC028_14550 IPR016066 Alpha-D-phosphohexomutase, conserved site AC028_14550 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AC028_14550 IPR005841 Alpha-D-phosphohexomutase superfamily AC028_14550 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AC028_14555 IPR004165 Coenzyme A transferase family I AC028_14555 IPR012792 3-oxoacid CoA-transferase, subunit A AC028_14555 IPR037171 NagB/RpiA transferase-like AC028_14555 IPR004163 Coenzyme A transferase binding site AC028_14560 IPR004164 Coenzyme A transferase active site AC028_14560 IPR037171 NagB/RpiA transferase-like AC028_14560 IPR012791 3-oxoacid CoA-transferase, subunit B AC028_14560 IPR004165 Coenzyme A transferase family I AC028_14565 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_14565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_14565 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase AC028_14580 IPR005586 ABC-type transport auxiliary lipoprotein component AC028_14580 IPR003399 Mce/MlaD AC028_14585 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AC028_14585 IPR017871 ABC transporter, conserved site AC028_14585 IPR003439 ABC transporter-like AC028_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14585 IPR003593 AAA+ ATPase domain AC028_14590 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AC028_14590 IPR030802 ABC transporter permease MalE AC028_14625 IPR003593 AAA+ ATPase domain AC028_14625 IPR025302 Domain of unknown function DUF4162 AC028_14625 IPR017871 ABC transporter, conserved site AC028_14625 IPR003439 ABC transporter-like AC028_14625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14630 IPR037478 YwkD-like domain AC028_14630 IPR037523 Vicinal oxygen chelate (VOC) domain AC028_14630 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_14630 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_14635 IPR004840 Amino acid permease, conserved site AC028_14635 IPR004841 Amino acid permease/ SLC12A domain AC028_14640 IPR003726 Homocysteine-binding domain AC028_14640 IPR036589 Homocysteine-binding domain superfamily AC028_14640 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT AC028_14650 IPR003744 Queuosine precursor transporter AC028_14670 IPR005149 Transcription regulator PadR, N-terminal AC028_14670 IPR011991 ArsR-like helix-turn-helix domain AC028_14670 IPR036390 Winged helix DNA-binding domain superfamily AC028_14670 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_14705 IPR001095 Acetyl-CoA carboxylase, alpha subunit AC028_14705 IPR029045 ClpP/crotonase-like domain superfamily AC028_14705 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AC028_14710 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AC028_14710 IPR012340 Nucleic acid-binding, OB-fold AC028_14710 IPR003141 Polymerase/histidinol phosphatase, N-terminal AC028_14710 IPR004805 DNA polymerase III, alpha subunit AC028_14710 IPR004013 PHP domain AC028_14710 IPR016195 Polymerase/histidinol phosphatase-like AC028_14710 IPR040982 DNA polymerase III alpha subunit finger domain AC028_14710 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AC028_14710 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AC028_14710 IPR029460 DNA polymerase, helix-hairpin-helix motif AC028_14715 IPR036397 Ribonuclease H superfamily AC028_14715 IPR012337 Ribonuclease H-like superfamily AC028_14715 IPR001352 Ribonuclease HII/HIII AC028_14715 IPR024567 Ribonuclease HII/HIII domain AC028_14715 IPR022898 Ribonuclease HII AC028_14720 IPR003835 Glycosyl transferase, family 19 AC028_14725 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AC028_14725 IPR001451 Hexapeptide repeat AC028_14725 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AC028_14725 IPR011004 Trimeric LpxA-like superfamily AC028_14725 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AC028_14730 IPR029069 HotDog domain superfamily AC028_14730 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AC028_14730 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AC028_14735 IPR001451 Hexapeptide repeat AC028_14735 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD AC028_14735 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AC028_14735 IPR011004 Trimeric LpxA-like superfamily AC028_14745 IPR039910 Surface antigen D15-like AC028_14745 IPR023707 Outer membrane protein assembly factor BamA AC028_14745 IPR000184 Bacterial surface antigen (D15) AC028_14745 IPR034746 POTRA domain AC028_14745 IPR010827 POTRA domain, BamA/TamA-like AC028_14750 IPR041489 PDZ domain 6 AC028_14750 IPR036034 PDZ superfamily AC028_14750 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AC028_14750 IPR008915 Peptidase M50 AC028_14750 IPR001478 PDZ domain AC028_14755 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC028_14755 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AC028_14755 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AC028_14755 IPR036169 DXP reductoisomerase, C-terminal domain superfamily AC028_14755 IPR036291 NAD(P)-binding domain superfamily AC028_14755 IPR026877 DXP reductoisomerase C-terminal domain AC028_14760 IPR000374 Phosphatidate cytidylyltransferase AC028_14765 IPR001441 Decaprenyl diphosphate synthase-like AC028_14765 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AC028_14765 IPR036424 Decaprenyl diphosphate synthase-like superfamily AC028_14770 IPR036191 RRF superfamily AC028_14770 IPR002661 Ribosome recycling factor AC028_14770 IPR023584 Ribosome recycling factor domain AC028_14775 IPR001048 Aspartate/glutamate/uridylate kinase AC028_14775 IPR015963 Uridylate kinase, bacteria AC028_14775 IPR011817 Uridylate kinase AC028_14775 IPR036393 Acetylglutamate kinase-like superfamily AC028_14780 IPR000160 GGDEF domain AC028_14780 IPR001789 Signal transduction response regulator, receiver domain AC028_14780 IPR029787 Nucleotide cyclase AC028_14780 IPR011006 CheY-like superfamily AC028_14785 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AC028_14785 IPR009060 UBA-like superfamily AC028_14785 IPR018101 Translation elongation factor Ts, conserved site AC028_14785 IPR036402 Elongation factor Ts, dimerisation domain superfamily AC028_14785 IPR001816 Translation elongation factor EFTs/EF1B AC028_14790 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AC028_14790 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AC028_14790 IPR018130 Ribosomal protein S2, conserved site AC028_14790 IPR001865 Ribosomal protein S2 AC028_14825 IPR001714 Peptidase M24, methionine aminopeptidase AC028_14825 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AC028_14825 IPR036005 Creatinase/aminopeptidase-like AC028_14825 IPR000994 Peptidase M24 AC028_14830 IPR003607 HD/PDEase domain AC028_14830 IPR006674 HD domain AC028_14830 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AC028_14830 IPR002934 Polymerase, nucleotidyl transferase domain AC028_14830 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AC028_14830 IPR002912 ACT domain AC028_14835 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily AC028_14835 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 AC028_14835 IPR001451 Hexapeptide repeat AC028_14835 IPR011004 Trimeric LpxA-like superfamily AC028_14835 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family AC028_14840 IPR006660 Arsenate reductase-like AC028_14840 IPR006504 Transcriptional regulator Spx/MgsR AC028_14840 IPR036249 Thioredoxin-like superfamily AC028_14845 IPR036264 Bacterial exopeptidase dimerisation domain AC028_14845 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AC028_14845 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AC028_14845 IPR011650 Peptidase M20, dimerisation domain AC028_14845 IPR002933 Peptidase M20 AC028_14850 IPR006426 Asparagine synthase, glutamine-hydrolyzing AC028_14850 IPR001962 Asparagine synthase AC028_14850 IPR033738 Asparagine synthase, N-terminal domain AC028_14850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_14850 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_14850 IPR017932 Glutamine amidotransferase type 2 domain AC028_14860 IPR030148 Catecholate siderophore receptor Fiu AC028_14860 IPR012910 TonB-dependent receptor, plug domain AC028_14860 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_14860 IPR039423 TonB-dependent receptor-like AC028_14860 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_14860 IPR010105 TonB-dependent siderophore receptor AC028_14860 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_14865 IPR014395 Penicillin/GL-7-ACA/AHL acylase AC028_14865 IPR023343 Penicillin amidase type, domain 1 AC028_14865 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_14865 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase AC028_14870 IPR009078 Ferritin-like superfamily AC028_14870 IPR012347 Ferritin-like AC028_14870 IPR009040 Ferritin-like diiron domain AC028_14870 IPR002024 Bacterioferritin AC028_14870 IPR008331 Ferritin/DPS protein domain AC028_14875 IPR025835 Thiopurine S-methyltransferase AC028_14875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_14875 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification AC028_14875 IPR008854 TPMT family AC028_14880 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AC028_14880 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AC028_14880 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AC028_14880 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AC028_14880 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AC028_14880 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AC028_14880 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AC028_14895 IPR003423 Outer membrane efflux protein AC028_14895 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_14900 IPR005694 Efflux pump membrane protein AC028_14900 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_14905 IPR036259 MFS transporter superfamily AC028_14905 IPR004638 Drug resistance transporter EmrB-like AC028_14905 IPR020846 Major facilitator superfamily domain AC028_14905 IPR011701 Major facilitator superfamily AC028_14915 IPR026891 Fibronectin type III-like domain AC028_14915 IPR013783 Immunoglobulin-like fold AC028_14915 IPR017853 Glycoside hydrolase superfamily AC028_14915 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AC028_14915 IPR001764 Glycoside hydrolase, family 3, N-terminal AC028_14915 IPR019800 Glycoside hydrolase, family 3, active site AC028_14915 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AC028_14915 IPR002772 Glycoside hydrolase family 3 C-terminal domain AC028_14950 IPR036390 Winged helix DNA-binding domain superfamily AC028_14950 IPR000835 MarR-type HTH domain AC028_14950 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_14950 IPR023187 Transcriptional regulator MarR-type, conserved site AC028_14955 IPR001567 Peptidase M3A/M3B catalytic domain AC028_14955 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_14960 IPR029759 Glutathione peroxidase active site AC028_14960 IPR029760 Glutathione peroxidase conserved site AC028_14960 IPR036249 Thioredoxin-like superfamily AC028_14960 IPR000889 Glutathione peroxidase AC028_14965 IPR017938 Riboflavin synthase-like beta-barrel AC028_14965 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AC028_14965 IPR017927 FAD-binding domain, ferredoxin reductase-type AC028_14965 IPR001433 Oxidoreductase FAD/NAD(P)-binding AC028_14965 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AC028_14965 IPR033892 Ferredoxin--NADP reductase, bacteria AC028_14965 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AC028_14970 IPR017871 ABC transporter, conserved site AC028_14970 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_14970 IPR039421 Type I protein exporter AC028_14970 IPR003439 ABC transporter-like AC028_14970 IPR011527 ABC transporter type 1, transmembrane domain AC028_14970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_14970 IPR003593 AAA+ ATPase domain AC028_14975 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AC028_14975 IPR020557 Fumarate lyase, conserved site AC028_14975 IPR011167 Iron-dependent fumarate hydratase AC028_14975 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AC028_14975 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AC028_14985 IPR001765 Carbonic anhydrase AC028_14985 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AC028_14985 IPR036874 Carbonic anhydrase superfamily AC028_14990 IPR036541 Phospholipase A1 superfamily AC028_14990 IPR003187 Phospholipase A1 AC028_15000 IPR002059 Cold-shock protein, DNA-binding AC028_15000 IPR012156 Cold shock, CspA AC028_15000 IPR011129 Cold shock domain AC028_15000 IPR012340 Nucleic acid-binding, OB-fold AC028_15000 IPR019844 Cold-shock (CSD) domain AC028_15015 IPR000594 THIF-type NAD/FAD binding fold AC028_15015 IPR035985 Ubiquitin-activating enzyme AC028_15020 IPR001130 TatD family AC028_15020 IPR032466 Metal-dependent hydrolase AC028_15020 IPR018228 Deoxyribonuclease, TatD-related, conserved site AC028_15035 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15035 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15035 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15035 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15035 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15035 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15035 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15045 IPR036249 Thioredoxin-like superfamily AC028_15045 IPR004045 Glutathione S-transferase, N-terminal AC028_15045 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_15045 IPR010987 Glutathione S-transferase, C-terminal-like AC028_15045 IPR004046 Glutathione S-transferase, C-terminal AC028_15055 IPR006426 Asparagine synthase, glutamine-hydrolyzing AC028_15055 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_15055 IPR033738 Asparagine synthase, N-terminal domain AC028_15055 IPR001962 Asparagine synthase AC028_15055 IPR017932 Glutamine amidotransferase type 2 domain AC028_15060 IPR029039 Flavoprotein-like superfamily AC028_15060 IPR005025 NADPH-dependent FMN reductase-like AC028_15065 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15065 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AC028_15065 IPR007694 DNA helicase, DnaB-like, C-terminal AC028_15065 IPR007693 DNA helicase, DnaB-like, N-terminal AC028_15065 IPR007692 DNA helicase, DnaB type AC028_15065 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AC028_15065 IPR003593 AAA+ ATPase domain AC028_15070 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AC028_15070 IPR002081 Cryptochrome/DNA photolyase class 1 AC028_15070 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AC028_15070 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AC028_15070 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AC028_15070 IPR006050 DNA photolyase, N-terminal AC028_15070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_15075 IPR006664 Outer membrane protein, bacterial AC028_15075 IPR006665 OmpA-like domain AC028_15075 IPR028974 TSP type-3 repeat AC028_15075 IPR008722 Outer membrane porin F, N-terminal AC028_15075 IPR036737 OmpA-like domain superfamily AC028_15075 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AC028_15075 IPR006690 Outer membrane protein, OmpA-like, conserved site AC028_15080 IPR005119 LysR, substrate-binding AC028_15080 IPR000847 Transcription regulator HTH, LysR AC028_15080 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15080 IPR036390 Winged helix DNA-binding domain superfamily AC028_15095 IPR006143 RND efflux pump, membrane fusion protein AC028_15095 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_15100 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_15100 IPR001036 Acriflavin resistance protein AC028_15100 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AC028_15105 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_15105 IPR036291 NAD(P)-binding domain superfamily AC028_15105 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_15110 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_15110 IPR003423 Outer membrane efflux protein AC028_15115 IPR035965 PAS domain superfamily AC028_15115 IPR013656 PAS fold-4 AC028_15115 IPR000160 GGDEF domain AC028_15115 IPR029787 Nucleotide cyclase AC028_15115 IPR000700 PAS-associated, C-terminal AC028_15115 IPR000014 PAS domain AC028_15150 IPR000305 GIY-YIG endonuclease AC028_15150 IPR035901 GIY-YIG endonuclease superfamily AC028_15155 IPR003593 AAA+ ATPase domain AC028_15155 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AC028_15155 IPR002611 IstB-like ATP-binding protein AC028_15155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15160 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type AC028_15160 IPR012337 Ribonuclease H-like superfamily AC028_15160 IPR036397 Ribonuclease H superfamily AC028_15160 IPR001584 Integrase, catalytic core AC028_15190 IPR008490 Transposase InsH, N-terminal AC028_15190 IPR002559 Transposase, IS4-like AC028_15200 IPR039425 RNA polymerase sigma-70 like AC028_15200 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AC028_15200 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15200 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AC028_15200 IPR013325 RNA polymerase sigma factor, region 2 AC028_15200 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_15200 IPR007627 RNA polymerase sigma-70 region 2 AC028_15200 IPR014284 RNA polymerase sigma-70 like domain AC028_15205 IPR006860 FecR protein AC028_15205 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AC028_15205 IPR032623 FecR, N-terminal AC028_15215 IPR009057 Homeobox-like domain superfamily AC028_15215 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15215 IPR002514 Transposase IS3/IS911family AC028_15220 IPR025948 HTH-like domain AC028_15220 IPR012337 Ribonuclease H-like superfamily AC028_15220 IPR001584 Integrase, catalytic core AC028_15220 IPR036397 Ribonuclease H superfamily AC028_15230 IPR010917 TonB-dependent receptor, conserved site AC028_15230 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_15230 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_15230 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_15230 IPR039426 Vitamin B12 transporter BtuB-like AC028_15230 IPR010916 TonB box, conserved site AC028_15230 IPR012910 TonB-dependent receptor, plug domain AC028_15230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_15245 IPR002559 Transposase, IS4-like AC028_15245 IPR008490 Transposase InsH, N-terminal AC028_15260 IPR008490 Transposase InsH, N-terminal AC028_15260 IPR002559 Transposase, IS4-like AC028_15270 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AC028_15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15270 IPR004881 Ribosome biogenesis GTPase RsgA AC028_15270 IPR010914 RsgA GTPase domain AC028_15285 IPR013780 Glycosyl hydrolase, all-beta AC028_15285 IPR017853 Glycoside hydrolase superfamily AC028_15285 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AC028_15295 IPR036259 MFS transporter superfamily AC028_15295 IPR018043 Sodium:galactoside symporter, conserved site AC028_15295 IPR039672 Lactose permease-like AC028_15300 IPR000843 LacI-type HTH domain AC028_15300 IPR023588 Transcription regulator HTH, PurR AC028_15300 IPR028082 Periplasmic binding protein-like I AC028_15300 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_15305 IPR008490 Transposase InsH, N-terminal AC028_15305 IPR002559 Transposase, IS4-like AC028_15310 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_15310 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_15310 IPR036291 NAD(P)-binding domain superfamily AC028_15310 IPR011283 Acetoacetyl-CoA reductase AC028_15315 IPR004680 Citrate transporter-like domain AC028_15315 IPR014738 Citrate transporter AC028_15325 IPR011006 CheY-like superfamily AC028_15325 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_15325 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15325 IPR016032 Signal transduction response regulator, C-terminal effector AC028_15325 IPR039420 Transcriptional regulatory protein WalR-like AC028_15325 IPR001789 Signal transduction response regulator, receiver domain AC028_15330 IPR003594 Histidine kinase/HSP90-like ATPase AC028_15330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_15330 IPR005467 Histidine kinase domain AC028_15330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_15330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_15330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_15330 IPR013727 Two-component sensor kinase, N-terminal AC028_15340 IPR011006 CheY-like superfamily AC028_15340 IPR001789 Signal transduction response regulator, receiver domain AC028_15340 IPR000792 Transcription regulator LuxR, C-terminal AC028_15340 IPR016032 Signal transduction response regulator, C-terminal effector AC028_15355 IPR023210 NADP-dependent oxidoreductase domain AC028_15355 IPR036812 NADP-dependent oxidoreductase domain superfamily AC028_15365 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15365 IPR000847 Transcription regulator HTH, LysR AC028_15365 IPR005119 LysR, substrate-binding AC028_15365 IPR036390 Winged helix DNA-binding domain superfamily AC028_15375 IPR011701 Major facilitator superfamily AC028_15375 IPR020846 Major facilitator superfamily domain AC028_15375 IPR036259 MFS transporter superfamily AC028_15375 IPR004736 MFS transporter, metabolite:H symporter AC028_15375 IPR005829 Sugar transporter, conserved site AC028_15380 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AC028_15380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_15380 IPR033479 Double Cache domain 1 AC028_15380 IPR003594 Histidine kinase/HSP90-like ATPase AC028_15380 IPR029151 Periplasmic sensor-like domain superfamily AC028_15380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_15380 IPR005467 Histidine kinase domain AC028_15380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_15380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_15390 IPR018107 Sodium:dicarboxylate symporter, conserved site AC028_15390 IPR036458 Sodium:dicarboxylate symporter superfamily AC028_15390 IPR023954 C4-dicarboxylate transport protein AC028_15390 IPR001991 Sodium:dicarboxylate symporter AC028_15395 IPR012302 Malic enzyme, NAD-binding AC028_15395 IPR012188 NAD(P)-dependent malic enzyme AC028_15395 IPR042113 Phosphate acetyltransferase, domain 1 AC028_15395 IPR037062 Malic enzyme, N-terminal domain superfamily AC028_15395 IPR036291 NAD(P)-binding domain superfamily AC028_15395 IPR002505 Phosphate acetyl/butaryl transferase AC028_15395 IPR012301 Malic enzyme, N-terminal domain AC028_15395 IPR015884 Malic enzyme, conserved site AC028_15395 IPR042112 Phosphate acetyltransferase, domain 2 AC028_15410 IPR006144 Secretion protein HlyD, conserved site AC028_15410 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_15425 IPR012337 Ribonuclease H-like superfamily AC028_15425 IPR025948 HTH-like domain AC028_15425 IPR036397 Ribonuclease H superfamily AC028_15425 IPR001584 Integrase, catalytic core AC028_15430 IPR009057 Homeobox-like domain superfamily AC028_15430 IPR002514 Transposase IS3/IS911family AC028_15445 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_15445 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_15445 IPR022398 Peptidase S8, subtilisin, His-active site AC028_15445 IPR000209 Peptidase S8/S53 domain AC028_15445 IPR015500 Peptidase S8, subtilisin-related AC028_15445 IPR036852 Peptidase S8/S53 domain superfamily AC028_15450 IPR000037 SsrA-binding protein AC028_15450 IPR020081 SsrA-binding protein, conserved site AC028_15450 IPR023620 Small protein B AC028_15455 IPR005031 Coenzyme Q-binding protein COQ10, START domain AC028_15455 IPR023393 START-like domain superfamily AC028_15460 IPR005346 RnfH protein AC028_15460 IPR037021 RnfH superfamily AC028_15460 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AC028_15465 IPR026592 Outer membrane protein assembly factor BamE AC028_15465 IPR037873 BamE-like AC028_15465 IPR007450 Lipoprotein SmpA/OmlA AC028_15470 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15470 IPR002481 Ferric-uptake regulator AC028_15470 IPR036390 Winged helix DNA-binding domain superfamily AC028_15475 IPR003395 RecF/RecN/SMC, N-terminal AC028_15475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15475 IPR004604 DNA recombination/repair protein RecN AC028_15480 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal AC028_15480 IPR002571 Heat-inducible transcription repressor HrcA AC028_15480 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AC028_15480 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15480 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain AC028_15480 IPR036390 Winged helix DNA-binding domain superfamily AC028_15480 IPR029016 GAF-like domain superfamily AC028_15485 IPR009012 GrpE nucleotide exchange factor, head AC028_15485 IPR000740 GrpE nucleotide exchange factor AC028_15485 IPR013805 GrpE nucleotide exchange factor, coiled-coil AC028_15490 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AC028_15490 IPR018181 Heat shock protein 70, conserved site AC028_15490 IPR012725 Chaperone DnaK AC028_15490 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AC028_15490 IPR013126 Heat shock protein 70 family AC028_15495 IPR008971 HSP40/DnaJ peptide-binding AC028_15495 IPR001623 DnaJ domain AC028_15495 IPR012724 Chaperone DnaJ AC028_15495 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AC028_15495 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AC028_15495 IPR036869 Chaperone J-domain superfamily AC028_15495 IPR002939 Chaperone DnaJ, C-terminal AC028_15500 IPR029056 Ribokinase-like AC028_15500 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AC028_15500 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase AC028_15500 IPR004625 Pyridoxine kinase AC028_15525 IPR039421 Type I protein exporter AC028_15525 IPR039395 Peptidase C39-like A AC028_15525 IPR005074 Peptidase C39, bacteriocin processing AC028_15525 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15525 IPR017871 ABC transporter, conserved site AC028_15525 IPR010132 ATPase, type I secretion system, HlyB AC028_15525 IPR011527 ABC transporter type 1, transmembrane domain AC028_15525 IPR003593 AAA+ ATPase domain AC028_15525 IPR003439 ABC transporter-like AC028_15525 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_15530 IPR005119 LysR, substrate-binding AC028_15530 IPR036390 Winged helix DNA-binding domain superfamily AC028_15530 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15530 IPR000847 Transcription regulator HTH, LysR AC028_15535 IPR003593 AAA+ ATPase domain AC028_15535 IPR039421 Type I protein exporter AC028_15535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15535 IPR011917 ABC transporter, lipid A export, MsbA AC028_15535 IPR011527 ABC transporter type 1, transmembrane domain AC028_15535 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_15535 IPR003439 ABC transporter-like AC028_15535 IPR017871 ABC transporter, conserved site AC028_15540 IPR023582 Impact family AC028_15540 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AC028_15540 IPR035647 EF-G domain III/V-like AC028_15540 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_15540 IPR036956 Impact, N-terminal domain superfamily AC028_15540 IPR001498 Impact, N-terminal AC028_15545 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AC028_15545 IPR031100 LOG family AC028_15550 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AC028_15550 IPR023753 FAD/NAD(P)-binding domain AC028_15550 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC028_15550 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AC028_15550 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_15550 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AC028_15550 IPR006258 Dihydrolipoamide dehydrogenase AC028_15555 IPR036625 E3-binding domain superfamily AC028_15555 IPR004167 Peripheral subunit-binding domain AC028_15555 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AC028_15555 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AC028_15555 IPR000089 Biotin/lipoyl attachment AC028_15555 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AC028_15555 IPR006255 Dihydrolipoamide succinyltransferase AC028_15555 IPR011053 Single hybrid motif AC028_15560 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain AC028_15560 IPR011603 2-oxoglutarate dehydrogenase E1 component AC028_15560 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily AC028_15560 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal AC028_15560 IPR001017 Dehydrogenase, E1 component AC028_15560 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_15560 IPR029061 Thiamin diphosphate-binding fold AC028_15570 IPR039994 JmjC domain-containing AC028_15570 IPR003347 JmjC domain AC028_15575 IPR002514 Transposase IS3/IS911family AC028_15575 IPR009057 Homeobox-like domain superfamily AC028_15575 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15580 IPR025948 HTH-like domain AC028_15580 IPR001584 Integrase, catalytic core AC028_15580 IPR012337 Ribonuclease H-like superfamily AC028_15580 IPR036397 Ribonuclease H superfamily AC028_15585 IPR009057 Homeobox-like domain superfamily AC028_15585 IPR002514 Transposase IS3/IS911family AC028_15585 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15590 IPR025948 HTH-like domain AC028_15590 IPR001584 Integrase, catalytic core AC028_15590 IPR012337 Ribonuclease H-like superfamily AC028_15590 IPR036397 Ribonuclease H superfamily AC028_15600 IPR000362 Fumarate lyase family AC028_15600 IPR013539 Adenylosuccinate lyase PurB, C-terminal AC028_15600 IPR004769 Adenylosuccinate lyase AC028_15600 IPR020557 Fumarate lyase, conserved site AC028_15600 IPR024083 Fumarase/histidase, N-terminal AC028_15600 IPR022761 Fumarate lyase, N-terminal AC028_15600 IPR008948 L-Aspartase-like AC028_15605 IPR002550 CNNM, transmembrane domain AC028_15605 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_15605 IPR005170 Transporter-associated domain AC028_15605 IPR036318 FAD-binding, type PCMH-like superfamily AC028_15605 IPR000644 CBS domain AC028_15610 IPR024083 Fumarase/histidase, N-terminal AC028_15610 IPR005677 Fumarate hydratase, class II AC028_15610 IPR020557 Fumarate lyase, conserved site AC028_15610 IPR022761 Fumarate lyase, N-terminal AC028_15610 IPR008948 L-Aspartase-like AC028_15610 IPR018951 Fumarase C, C-terminal AC028_15610 IPR000362 Fumarate lyase family AC028_15635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15635 IPR003439 ABC transporter-like AC028_15635 IPR003593 AAA+ ATPase domain AC028_15640 IPR036390 Winged helix DNA-binding domain superfamily AC028_15640 IPR000524 Transcription regulator HTH, GntR AC028_15640 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_15645 IPR036249 Thioredoxin-like superfamily AC028_15645 IPR029760 Glutathione peroxidase conserved site AC028_15645 IPR029759 Glutathione peroxidase active site AC028_15645 IPR000889 Glutathione peroxidase AC028_15650 IPR008104 Macrophage infectivity potentiator AC028_15650 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AC028_15650 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AC028_15650 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AC028_15655 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AC028_15655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_15655 IPR036291 NAD(P)-binding domain superfamily AC028_15655 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AC028_15655 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AC028_15655 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AC028_15655 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AC028_15655 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AC028_15660 IPR007236 SlyX AC028_15675 IPR023588 Transcription regulator HTH, PurR AC028_15675 IPR000843 LacI-type HTH domain AC028_15675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_15675 IPR028082 Periplasmic binding protein-like I AC028_15680 IPR005964 Bacterial glucose/galactose transporter AC028_15680 IPR011701 Major facilitator superfamily AC028_15680 IPR036259 MFS transporter superfamily AC028_15685 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AC028_15685 IPR002139 Ribokinase/fructokinase AC028_15685 IPR029056 Ribokinase-like AC028_15685 IPR011611 Carbohydrate kinase PfkB AC028_15695 IPR036589 Homocysteine-binding domain superfamily AC028_15695 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AC028_15695 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AC028_15695 IPR000489 Pterin-binding domain AC028_15695 IPR036594 Methionine synthase domain AC028_15695 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AC028_15695 IPR011822 Cobalamin-dependent methionine synthase AC028_15695 IPR033706 Methionine synthase, B12-binding domain AC028_15695 IPR003726 Homocysteine-binding domain AC028_15695 IPR011005 Dihydropteroate synthase-like AC028_15695 IPR036724 Cobalamin-binding domain superfamily AC028_15695 IPR006158 Cobalamin (vitamin B12)-binding domain AC028_15700 IPR011005 Dihydropteroate synthase-like AC028_15700 IPR003726 Homocysteine-binding domain AC028_15700 IPR000489 Pterin-binding domain AC028_15700 IPR036589 Homocysteine-binding domain superfamily AC028_15705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_15705 IPR004033 UbiE/COQ5 methyltransferase AC028_15705 IPR023576 UbiE/COQ5 methyltransferase, conserved site AC028_15710 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15710 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15710 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15710 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15710 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15710 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15710 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15715 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15715 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15715 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15715 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15715 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15715 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15715 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15720 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15720 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15720 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15720 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15720 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15720 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15720 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15725 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15725 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15725 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15725 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15725 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15725 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15725 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15730 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15730 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15730 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15735 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15735 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15735 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15735 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15740 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15740 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15745 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15745 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15745 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15745 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15745 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15745 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15745 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_15750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_15750 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_15750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_15750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_15750 IPR006089 Acyl-CoA dehydrogenase, conserved site AC028_15750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_15765 IPR013668 Ribonuclease R winged-helix domain AC028_15765 IPR022966 Ribonuclease II/R, conserved site AC028_15765 IPR011129 Cold shock domain AC028_15765 IPR040476 RNase II/RNase R, cold shock domain AC028_15765 IPR012340 Nucleic acid-binding, OB-fold AC028_15765 IPR013223 Ribonuclease B, N-terminal OB domain AC028_15765 IPR001900 Ribonuclease II/R AC028_15765 IPR004476 Ribonuclease II/ribonuclease R AC028_15765 IPR003029 S1 domain AC028_15765 IPR011805 Ribonuclease R AC028_15765 IPR022967 RNA-binding domain, S1 AC028_15785 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AC028_15785 IPR029064 50S ribosomal protein L30e-like AC028_15785 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_15785 IPR029028 Alpha/beta knot methyltransferases AC028_15785 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AC028_15785 IPR004441 RNA methyltransferase TrmH family AC028_15785 IPR001537 tRNA/rRNA methyltransferase, SpoU type AC028_15790 IPR000160 GGDEF domain AC028_15790 IPR029787 Nucleotide cyclase AC028_15790 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AC028_15795 IPR005987 Ribonuclease T AC028_15795 IPR012337 Ribonuclease H-like superfamily AC028_15795 IPR036397 Ribonuclease H superfamily AC028_15795 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_15805 IPR026022 PhoU domain AC028_15805 IPR038078 PhoU-like domain superfamily AC028_15805 IPR028366 Phosphate transport system protein PhoU AC028_15810 IPR015850 ABC transporter, phosphate import, PstB AC028_15810 IPR005670 Phosphate transport system permease protein 1 AC028_15810 IPR003593 AAA+ ATPase domain AC028_15810 IPR017871 ABC transporter, conserved site AC028_15810 IPR003439 ABC transporter-like AC028_15810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_15815 IPR005672 Phosphate transport system permease protein PstA AC028_15815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_15815 IPR035906 MetI-like superfamily AC028_15820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_15820 IPR035906 MetI-like superfamily AC028_15820 IPR011864 Phosphate ABC transporter, permease protein PstC AC028_15825 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AC028_15825 IPR024370 PBP domain AC028_15830 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AC028_15830 IPR024370 PBP domain AC028_15845 IPR001765 Carbonic anhydrase AC028_15845 IPR036874 Carbonic anhydrase superfamily AC028_15845 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AC028_15850 IPR036513 STAS domain superfamily AC028_15850 IPR002645 STAS domain AC028_15850 IPR001902 SLC26A/SulP transporter AC028_15850 IPR011547 SLC26A/SulP transporter domain AC028_15855 IPR005759 Endonuclease III AC028_15855 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AC028_15855 IPR000445 Helix-hairpin-helix motif AC028_15855 IPR003265 HhH-GPD domain AC028_15855 IPR004035 Endonuclease III, iron-sulphur binding site AC028_15855 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AC028_15855 IPR004036 Endonuclease III-like, conserved site-2 AC028_15855 IPR011257 DNA glycosylase AC028_15865 IPR014748 Enoyl-CoA hydratase, C-terminal AC028_15865 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_15865 IPR001753 Enoyl-CoA hydratase/isomerase AC028_15865 IPR029045 ClpP/crotonase-like domain superfamily AC028_15870 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AC028_15870 IPR008104 Macrophage infectivity potentiator AC028_15870 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AC028_15870 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AC028_15875 IPR023735 Uncharacterised nudix hydrolase NudL AC028_15875 IPR000059 NUDIX hydrolase, NudL, conserved site AC028_15875 IPR000086 NUDIX hydrolase domain AC028_15875 IPR015797 NUDIX hydrolase-like domain superfamily AC028_15880 IPR001763 Rhodanese-like domain AC028_15880 IPR036873 Rhodanese-like domain superfamily AC028_15915 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_15915 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AC028_15915 IPR000241 Putative RNA methylase domain AC028_15915 IPR019614 S-adenosylmethionine-dependent methyltransferase AC028_15915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_15915 IPR004114 THUMP domain AC028_15920 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AC028_15920 IPR002504 NAD kinase AC028_15920 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AC028_15920 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AC028_15940 IPR013620 Exodeoxyribonuclease I, C-terminal AC028_15940 IPR012337 Ribonuclease H-like superfamily AC028_15940 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_15940 IPR038649 Exonuclease I, SH3-like domain superfamily AC028_15940 IPR034747 Exonuclease I, SH3-like domain AC028_15940 IPR034748 Exonuclease I, C-terminal alpha-helical domain AC028_15940 IPR023607 Exodeoxyribonuclease I AC028_15940 IPR036397 Ribonuclease H superfamily AC028_15945 IPR002938 FAD-binding domain AC028_15945 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_15945 IPR027545 Kynurenine 3-monooxygenase AC028_15950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_15950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_15950 IPR015424 Pyridoxal phosphate-dependent transferase AC028_15950 IPR010111 Kynureninase AC028_15950 IPR000192 Aminotransferase class V domain AC028_15960 IPR014710 RmlC-like jelly roll fold AC028_15960 IPR010329 3-hydroxyanthranilic acid dioxygenase AC028_15960 IPR011051 RmlC-like cupin domain superfamily AC028_15965 IPR001765 Carbonic anhydrase AC028_15965 IPR036874 Carbonic anhydrase superfamily AC028_15965 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AC028_16010 IPR000792 Transcription regulator LuxR, C-terminal AC028_16010 IPR011006 CheY-like superfamily AC028_16010 IPR016032 Signal transduction response regulator, C-terminal effector AC028_16010 IPR001789 Signal transduction response regulator, receiver domain AC028_16050 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AC028_16050 IPR004522 Asparagine-tRNA ligase AC028_16050 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AC028_16050 IPR012340 Nucleic acid-binding, OB-fold AC028_16050 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AC028_16050 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_16055 IPR016092 FeS cluster insertion protein AC028_16055 IPR000361 FeS cluster biogenesis AC028_16055 IPR035903 HesB-like domain superfamily AC028_16055 IPR017870 FeS cluster insertion, C-terminal, conserved site AC028_16060 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AC028_16060 IPR035980 Ribosomal protein S6 superfamily AC028_16060 IPR020814 Ribosomal protein S6, plastid/chloroplast AC028_16060 IPR000529 Ribosomal protein S6 AC028_16065 IPR018275 Ribosomal protein S18, conserved site AC028_16065 IPR036870 Ribosomal protein S18 superfamily AC028_16065 IPR001648 Ribosomal protein S18 AC028_16070 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AC028_16070 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AC028_16070 IPR020070 Ribosomal protein L9, N-terminal AC028_16070 IPR020069 Ribosomal protein L9, C-terminal AC028_16070 IPR020594 Ribosomal protein L9, bacteria/chloroplast AC028_16070 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AC028_16070 IPR000244 Ribosomal protein L9 AC028_16080 IPR036277 SMCs flexible hinge superfamily AC028_16080 IPR003395 RecF/RecN/SMC, N-terminal AC028_16080 IPR024704 Structural maintenance of chromosomes protein AC028_16080 IPR010935 SMCs flexible hinge AC028_16080 IPR011890 Structural maintenance of chromosomes protein, prokaryotic AC028_16080 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16085 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily AC028_16085 IPR007449 ZipA, C-terminal FtsZ-binding domain AC028_16085 IPR011919 Cell division protein ZipA AC028_16100 IPR013840 NAD-dependent DNA ligase, N-terminal AC028_16100 IPR012340 Nucleic acid-binding, OB-fold AC028_16100 IPR036420 BRCT domain superfamily AC028_16100 IPR001357 BRCT domain AC028_16100 IPR004150 NAD-dependent DNA ligase, OB-fold AC028_16100 IPR041663 DisA/LigA, helix-hairpin-helix motif AC028_16100 IPR013839 NAD-dependent DNA ligase, adenylation AC028_16100 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AC028_16100 IPR001679 NAD-dependent DNA ligase AC028_16100 IPR018239 NAD-dependent DNA ligase, active site AC028_16100 IPR010994 RuvA domain 2-like AC028_16105 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AC028_16105 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_16105 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AC028_16105 IPR004525 Elongation factor P--(R)-beta-lysine ligase AC028_16115 IPR011559 Initiation factor 2B alpha/beta/delta AC028_16115 IPR037171 NagB/RpiA transferase-like AC028_16115 IPR005251 Methylthioribose-1-phosphate isomerase AC028_16115 IPR000649 Initiation factor 2B-related AC028_16115 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal AC028_16120 IPR005743 DNA gyrase, subunit A AC028_16120 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AC028_16120 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AC028_16120 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AC028_16120 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AC028_16120 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AC028_16120 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AC028_16125 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_16125 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_16125 IPR017511 PQQ-dependent membrane bound dehydrogenase AC028_16125 IPR002372 Pyrrolo-quinoline quinone repeat AC028_16135 IPR035085 Urocanase, Rossmann-like domain AC028_16135 IPR023636 Urocanase conserved site AC028_16135 IPR035400 Urocanase, N-terminal domain AC028_16135 IPR038364 Urocanase, central domain superfamily AC028_16135 IPR036190 Urocanase superfamily AC028_16135 IPR023637 Urocanase AC028_16135 IPR035401 Urocanase, C-terminal domain AC028_16145 IPR024083 Fumarase/histidase, N-terminal AC028_16145 IPR005921 Histidine ammonia-lyase AC028_16145 IPR008948 L-Aspartase-like AC028_16145 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AC028_16145 IPR001106 Aromatic amino acid lyase AC028_16150 IPR005920 Imidazolonepropionase AC028_16150 IPR013108 Amidohydrolase 3 AC028_16150 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_16150 IPR032466 Metal-dependent hydrolase AC028_16165 IPR036390 Winged helix DNA-binding domain superfamily AC028_16165 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16165 IPR011663 UbiC transcription regulator-associated AC028_16165 IPR000524 Transcription regulator HTH, GntR AC028_16165 IPR010248 Histidine utilization repressor AC028_16165 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AC028_16190 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ AC028_16190 IPR013130 Ferric reductase transmembrane component-like domain AC028_16195 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP AC028_16195 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily AC028_16195 IPR000572 Oxidoreductase, molybdopterin-binding domain AC028_16200 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AC028_16200 IPR022278 Phosphoserine aminotransferase AC028_16200 IPR000192 Aminotransferase class V domain AC028_16200 IPR015424 Pyridoxal phosphate-dependent transferase AC028_16200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_16200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_16205 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AC028_16205 IPR001086 Prephenate dehydratase AC028_16205 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain AC028_16205 IPR002912 ACT domain AC028_16205 IPR002701 Chorismate mutase II, prokaryotic-type AC028_16205 IPR018528 Prephenate dehydratase, conserved site AC028_16205 IPR036979 Chorismate mutase domain superfamily AC028_16205 IPR036263 Chorismate mutase type II superfamily AC028_16210 IPR036968 Enolpyruvate transferase domain superfamily AC028_16210 IPR001986 Enolpyruvate transferase domain AC028_16210 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AC028_16210 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AC028_16210 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AC028_16220 IPR037682 TonB, C-terminal AC028_16220 IPR006260 TonB/TolA, C-terminal AC028_16225 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_16225 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AC028_16225 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AC028_16225 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AC028_16225 IPR002317 Serine-tRNA ligase, type1 AC028_16225 IPR033729 Serine-tRNA ligase catalytic core domain AC028_16225 IPR015866 Serine-tRNA synthetase, type1, N-terminal AC028_16230 IPR003680 Flavodoxin-like fold AC028_16230 IPR029039 Flavoprotein-like superfamily AC028_16230 IPR023048 NADH-azoreductase, FMN-dependent AC028_16235 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16235 IPR036390 Winged helix DNA-binding domain superfamily AC028_16235 IPR000847 Transcription regulator HTH, LysR AC028_16235 IPR005119 LysR, substrate-binding AC028_16250 IPR004090 Chemotaxis methyl-accepting receptor AC028_16250 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_16250 IPR003660 HAMP domain AC028_16250 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_16250 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_16250 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_16275 IPR001789 Signal transduction response regulator, receiver domain AC028_16275 IPR005467 Histidine kinase domain AC028_16275 IPR011006 CheY-like superfamily AC028_16275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_16275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_16275 IPR000014 PAS domain AC028_16275 IPR035965 PAS domain superfamily AC028_16275 IPR013656 PAS fold-4 AC028_16275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_16275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_16275 IPR003594 Histidine kinase/HSP90-like ATPase AC028_16280 IPR001789 Signal transduction response regulator, receiver domain AC028_16280 IPR036641 HPT domain superfamily AC028_16280 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_16280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_16280 IPR005467 Histidine kinase domain AC028_16280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_16280 IPR003594 Histidine kinase/HSP90-like ATPase AC028_16280 IPR003660 HAMP domain AC028_16280 IPR019247 Histidine kinase BarA, N-terminal AC028_16280 IPR011006 CheY-like superfamily AC028_16280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_16280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_16285 IPR010624 KaiC domain AC028_16285 IPR014774 KaiC-like domain AC028_16285 IPR030665 Circadian clock protein kinase KaiC AC028_16285 IPR003593 AAA+ ATPase domain AC028_16285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_16290 IPR001789 Signal transduction response regulator, receiver domain AC028_16290 IPR000014 PAS domain AC028_16290 IPR011006 CheY-like superfamily AC028_16290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_16290 IPR001610 PAC motif AC028_16290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_16290 IPR035965 PAS domain superfamily AC028_16290 IPR005467 Histidine kinase domain AC028_16290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_16290 IPR000700 PAS-associated, C-terminal AC028_16290 IPR003594 Histidine kinase/HSP90-like ATPase AC028_16300 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AC028_16300 IPR005616 CcmH/CycL/Ccl2/NrfF family AC028_16305 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AC028_16305 IPR017937 Thioredoxin, conserved site AC028_16305 IPR036249 Thioredoxin-like superfamily AC028_16305 IPR013766 Thioredoxin domain AC028_16305 IPR013740 Redoxin AC028_16310 IPR002541 Cytochrome c assembly protein AC028_16310 IPR003568 Cytochrome c-type biogenesis protein CcmF AC028_16310 IPR003567 Cytochrome c-type biogenesis protein AC028_16310 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AC028_16315 IPR036127 CcmE-like superfamily AC028_16315 IPR004329 CcmE/CycJ protein AC028_16320 IPR007078 Haem exporter protein D (CcmD) AC028_16325 IPR002541 Cytochrome c assembly protein AC028_16325 IPR003557 Cytochrome c-type biogenesis protein CcmC AC028_16330 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_16330 IPR022398 Peptidase S8, subtilisin, His-active site AC028_16330 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_16330 IPR036852 Peptidase S8/S53 domain superfamily AC028_16330 IPR015500 Peptidase S8, subtilisin-related AC028_16330 IPR034084 Thermitase-like, domain AC028_16330 IPR000209 Peptidase S8/S53 domain AC028_16340 IPR013325 RNA polymerase sigma factor, region 2 AC028_16340 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AC028_16340 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16340 IPR014286 RNA polymerase sigma-70 RpoE type AC028_16340 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_16340 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AC028_16340 IPR039425 RNA polymerase sigma-70 like AC028_16340 IPR014284 RNA polymerase sigma-70 like domain AC028_16340 IPR007627 RNA polymerase sigma-70 region 2 AC028_16350 IPR009056 Cytochrome c-like domain AC028_16350 IPR036909 Cytochrome c-like domain superfamily AC028_16350 IPR002327 Cytochrome c, class IA/ IB AC028_16365 IPR014710 RmlC-like jelly roll fold AC028_16365 IPR008894 WxcM-like, C-terminal AC028_16365 IPR011051 RmlC-like cupin domain superfamily AC028_16385 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_16385 IPR015424 Pyridoxal phosphate-dependent transferase AC028_16385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_16385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_16390 IPR032896 Lipid III flippase WzxE AC028_16390 IPR002797 Polysaccharide biosynthesis protein AC028_16395 IPR029044 Nucleotide-diphospho-sugar transferases AC028_16395 IPR001173 Glycosyltransferase 2-like AC028_16410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_16410 IPR013216 Methyltransferase type 11 AC028_16420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_16420 IPR004498 Ribosomal protein L11 methyltransferase AC028_16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16445 IPR011924 Lipoprotein releasing system, ATP-binding protein AC028_16445 IPR015854 ABC transporter, lipoprotein release, LolD AC028_16445 IPR003439 ABC transporter-like AC028_16445 IPR003593 AAA+ ATPase domain AC028_16450 IPR039421 Type I protein exporter AC028_16450 IPR017871 ABC transporter, conserved site AC028_16450 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_16450 IPR011917 ABC transporter, lipid A export, MsbA AC028_16450 IPR003593 AAA+ ATPase domain AC028_16450 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16450 IPR003439 ABC transporter-like AC028_16450 IPR011527 ABC transporter type 1, transmembrane domain AC028_16455 IPR020846 Major facilitator superfamily domain AC028_16455 IPR005829 Sugar transporter, conserved site AC028_16455 IPR036259 MFS transporter superfamily AC028_16455 IPR011701 Major facilitator superfamily AC028_16460 IPR011251 Luciferase-like domain AC028_16460 IPR036661 Luciferase-like domain superfamily AC028_16460 IPR019949 Luciferase family oxidoreductase, group 1 AC028_16475 IPR000644 CBS domain AC028_16475 IPR002550 CNNM, transmembrane domain AC028_16475 IPR036318 FAD-binding, type PCMH-like superfamily AC028_16475 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_16475 IPR005170 Transporter-associated domain AC028_16485 IPR001204 Phosphate transporter AC028_16500 IPR002288 DNA gyrase B subunit, C-terminal AC028_16500 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AC028_16500 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AC028_16500 IPR003594 Histidine kinase/HSP90-like ATPase AC028_16500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_16500 IPR006171 TOPRIM domain AC028_16500 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_16500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_16500 IPR001241 DNA topoisomerase, type IIA AC028_16500 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AC028_16500 IPR018522 DNA topoisomerase, type IIA, conserved site AC028_16500 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AC028_16510 IPR029062 Class I glutamine amidotransferase-like AC028_16510 IPR017926 Glutamine amidotransferase AC028_16510 IPR017456 CTP synthase, N-terminal AC028_16510 IPR033828 CTP synthase GATase domain AC028_16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16510 IPR004468 CTP synthase AC028_16515 IPR006269 3-deoxy-8-phosphooctulonate synthase AC028_16515 IPR013785 Aldolase-type TIM barrel AC028_16515 IPR006218 DAHP synthetase I/KDSA AC028_16525 IPR020809 Enolase, conserved site AC028_16525 IPR029017 Enolase-like, N-terminal AC028_16525 IPR000941 Enolase AC028_16525 IPR036849 Enolase-like, C-terminal domain superfamily AC028_16525 IPR020811 Enolase, N-terminal AC028_16525 IPR020810 Enolase, C-terminal TIM barrel domain AC028_16530 IPR023081 Cell division protein FtsB AC028_16530 IPR007060 Septum formation initiator FtsL/DivIC AC028_16535 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AC028_16535 IPR034683 Cytidylyltransferase IspD/TarI AC028_16535 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC028_16535 IPR029044 Nucleotide-diphospho-sugar transferases AC028_16540 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AC028_16540 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AC028_16540 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily AC028_16545 IPR020119 Pseudouridine synthase TruD, conserved site AC028_16545 IPR001656 Pseudouridine synthase, TruD AC028_16545 IPR011760 Pseudouridine synthase, TruD, insertion domain AC028_16545 IPR042214 Pseudouridine synthase, TruD, catalytic domain AC028_16545 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_16550 IPR002625 Smr domain AC028_16550 IPR022990 Uncharacterised protein family UPF0115 AC028_16550 IPR036063 Smr domain superfamily AC028_16555 IPR036523 SurE-like phosphatase/nucleotidase superfamily AC028_16555 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AC028_16555 IPR030048 Survival protein SurE AC028_16560 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AC028_16560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_16565 IPR032816 SNARE associated Golgi protein AC028_16570 IPR036779 LysM domain superfamily AC028_16570 IPR018392 LysM domain AC028_16570 IPR016047 Peptidase M23 AC028_16570 IPR011055 Duplicated hybrid motif AC028_16575 IPR036748 MTH938-like superfamily AC028_16575 IPR007523 NDUFAF3/Mth938 domain-containing protein AC028_16580 IPR017924 RNA-binding protein YhbY AC028_16580 IPR035920 YhbY-like superfamily AC028_16580 IPR001890 RNA-binding, CRM domain AC028_16585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_16585 IPR015507 Ribosomal RNA large subunit methyltransferase E AC028_16585 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AC028_16590 IPR037219 Peptidase M41-like AC028_16590 IPR011546 Peptidase M41, FtsH extracellular AC028_16590 IPR000642 Peptidase M41 AC028_16590 IPR041569 AAA ATPase, AAA+ lid domain AC028_16590 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16590 IPR005936 Peptidase, FtsH AC028_16590 IPR003960 ATPase, AAA-type, conserved site AC028_16590 IPR003959 ATPase, AAA-type, core AC028_16590 IPR003593 AAA+ ATPase domain AC028_16595 IPR000489 Pterin-binding domain AC028_16595 IPR006390 Dihydropteroate synthase AC028_16595 IPR011005 Dihydropteroate synthase-like AC028_16600 IPR018022 IPP transferase AC028_16600 IPR039657 Dimethylallyltransferase AC028_16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16605 IPR005001 RNA-binding protein Hfq AC028_16605 IPR010920 LSM domain superfamily AC028_16610 IPR025121 GTPase HflX, N-terminal AC028_16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16610 IPR016496 GTPase HflX AC028_16610 IPR006073 GTP binding domain AC028_16610 IPR032305 GTP-binding protein, middle domain AC028_16610 IPR030394 HflX-type guanine nucleotide-binding (G) domain AC028_16610 IPR035647 EF-G domain III/V-like AC028_16610 IPR042108 GTPase HflX, N-terminal domain superfamily AC028_16615 IPR008136 CinA, C-terminal AC028_16615 IPR036653 CinA-like, C-terminal AC028_16620 IPR004147 UbiB domain AC028_16620 IPR010232 Probable protein kinase UbiB AC028_16620 IPR011009 Protein kinase-like domain superfamily AC028_16625 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_16625 IPR006200 Transcription regulator LexA AC028_16625 IPR039418 LexA-like AC028_16625 IPR036286 LexA/Signal peptidase-like superfamily AC028_16625 IPR036390 Winged helix DNA-binding domain superfamily AC028_16625 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16625 IPR006197 Peptidase S24, LexA-like AC028_16625 IPR006199 LexA repressor, DNA-binding domain AC028_16630 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface AC028_16630 IPR023400 DNA recombination and repair protein RecA, C-terminal AC028_16630 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AC028_16630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16630 IPR013765 DNA recombination and repair protein RecA AC028_16630 IPR003593 AAA+ ATPase domain AC028_16630 IPR020584 DNA recombination/repair protein RecA, conserved site AC028_16635 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16635 IPR003783 Regulatory protein RecX AC028_16640 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AC028_16640 IPR009000 Translation protein, beta-barrel domain superfamily AC028_16640 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AC028_16640 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AC028_16640 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AC028_16640 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AC028_16640 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AC028_16640 IPR003156 DHHA1 domain AC028_16640 IPR002318 Alanine-tRNA ligase, class IIc AC028_16645 IPR003751 Translational regulator CsrA AC028_16645 IPR036107 Carbon storage regulator superfamily AC028_16655 IPR004090 Chemotaxis methyl-accepting receptor AC028_16655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_16655 IPR001610 PAC motif AC028_16655 IPR000014 PAS domain AC028_16655 IPR000700 PAS-associated, C-terminal AC028_16655 IPR035965 PAS domain superfamily AC028_16655 IPR013655 PAS fold-3 AC028_16660 IPR012093 Pirin AC028_16660 IPR014710 RmlC-like jelly roll fold AC028_16660 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain AC028_16660 IPR003829 Pirin, N-terminal domain AC028_16660 IPR011051 RmlC-like cupin domain superfamily AC028_16670 IPR005119 LysR, substrate-binding AC028_16670 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16670 IPR036390 Winged helix DNA-binding domain superfamily AC028_16670 IPR000847 Transcription regulator HTH, LysR AC028_16695 IPR029056 Ribokinase-like AC028_16695 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AC028_16695 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AC028_16710 IPR002716 PIN domain AC028_16710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_16710 IPR003714 PhoH-like protein AC028_16710 IPR029060 PIN-like domain superfamily AC028_16715 IPR013766 Thioredoxin domain AC028_16715 IPR036249 Thioredoxin-like superfamily AC028_16715 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AC028_16730 IPR020624 Schiff base-forming aldolase, conserved site AC028_16730 IPR013785 Aldolase-type TIM barrel AC028_16730 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AC028_16730 IPR002220 DapA-like AC028_16730 IPR020625 Schiff base-forming aldolase, active site AC028_16740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_16740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_16740 IPR000813 7Fe ferredoxin AC028_16740 IPR022569 Ferredoxin, C-terminal AC028_16745 IPR007729 2-keto-3-deoxy-galactonokinase AC028_16745 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain AC028_16745 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal AC028_16750 IPR011042 Six-bladed beta-propeller, TolB-like AC028_16750 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_16750 IPR005511 Senescence marker protein-30 (SMP-30) AC028_16755 IPR029017 Enolase-like, N-terminal AC028_16755 IPR029065 Enolase C-terminal domain-like AC028_16755 IPR036849 Enolase-like, C-terminal domain superfamily AC028_16755 IPR023592 D-galactonate dehydratase AC028_16755 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_16755 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_16755 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AC028_16755 IPR034593 Mandelate racemase-like AC028_16760 IPR013785 Aldolase-type TIM barrel AC028_16760 IPR000887 KDPG/KHG aldolase AC028_16770 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain AC028_16770 IPR000847 Transcription regulator HTH, LysR AC028_16770 IPR036390 Winged helix DNA-binding domain superfamily AC028_16770 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_16770 IPR005119 LysR, substrate-binding AC028_16785 IPR001956 Carbohydrate-binding module 3 AC028_16785 IPR036966 Carbohydrate-binding module 3 superfamily AC028_16785 IPR013783 Immunoglobulin-like fold AC028_16785 IPR005102 Carbohydrate binding X2 domain AC028_16785 IPR014756 Immunoglobulin E-set AC028_16785 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AC028_16785 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AC028_16795 IPR013739 Beta-galactosidase C-terminal AC028_16795 IPR017853 Glycoside hydrolase superfamily AC028_16795 IPR013780 Glycosyl hydrolase, all-beta AC028_16795 IPR013529 Glycoside hydrolase, family 42, N-terminal AC028_16795 IPR003476 Glycoside hydrolase, family 42 AC028_16795 IPR029062 Class I glutamine amidotransferase-like AC028_16795 IPR013738 Beta-galactosidase trimerisation AC028_16800 IPR000322 Glycoside hydrolase family 31 AC028_16800 IPR037524 PA14/GLEYA domain AC028_16800 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 AC028_16800 IPR017853 Glycoside hydrolase superfamily AC028_16800 IPR033403 Domain of unknown function DUF5110 AC028_16800 IPR011013 Galactose mutarotase-like domain superfamily AC028_16800 IPR013780 Glycosyl hydrolase, all-beta AC028_16810 IPR000577 Carbohydrate kinase, FGGY AC028_16810 IPR006000 Xylulokinase AC028_16810 IPR018484 Carbohydrate kinase, FGGY, N-terminal AC028_16810 IPR018483 Carbohydrate kinase, FGGY, conserved site AC028_16810 IPR018485 Carbohydrate kinase, FGGY, C-terminal AC028_16815 IPR013452 Xylose isomerase, bacterial-type AC028_16815 IPR036237 Xylose isomerase-like superfamily AC028_16815 IPR001998 Xylose isomerase AC028_16820 IPR005829 Sugar transporter, conserved site AC028_16820 IPR003663 Sugar/inositol transporter AC028_16820 IPR036259 MFS transporter superfamily AC028_16820 IPR020846 Major facilitator superfamily domain AC028_16820 IPR005828 Major facilitator, sugar transporter-like AC028_16845 IPR003801 GTP cyclohydrolase FolE2/MptA AC028_16845 IPR022838 GTP cyclohydrolase FolE2 AC028_16855 IPR025866 Polymerase A arginine-rich C-terminal domain AC028_16855 IPR002646 Poly A polymerase, head domain AC028_16855 IPR010206 Poly(A) polymerase I AC028_16855 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AC028_16860 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AC028_16860 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AC028_16865 IPR040442 Pyruvate kinase-like domain superfamily AC028_16865 IPR003700 Ketopantoate hydroxymethyltransferase AC028_16865 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_16870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_16870 IPR003721 Pantoate-beta-alanine ligase AC028_16870 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AC028_16875 IPR009010 Aspartate decarboxylase-like domain superfamily AC028_16875 IPR003190 Aspartate decarboxylase AC028_16880 IPR035482 Phosphoglucose isomerase, SIS domain 2 AC028_16880 IPR018189 Phosphoglucose isomerase, conserved site AC028_16880 IPR035476 Phosphoglucose isomerase, SIS domain 1 AC028_16880 IPR023096 Phosphoglucose isomerase, C-terminal AC028_16880 IPR001672 Phosphoglucose isomerase (PGI) AC028_16900 IPR002772 Glycoside hydrolase family 3 C-terminal domain AC028_16900 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AC028_16900 IPR001764 Glycoside hydrolase, family 3, N-terminal AC028_16900 IPR013783 Immunoglobulin-like fold AC028_16900 IPR017853 Glycoside hydrolase superfamily AC028_16900 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AC028_16900 IPR026891 Fibronectin type III-like domain AC028_16905 IPR001734 Sodium/solute symporter AC028_16905 IPR018212 Sodium/solute symporter, conserved site AC028_16905 IPR038377 Sodium/glucose symporter superfamily AC028_16910 IPR029787 Nucleotide cyclase AC028_16910 IPR003018 GAF domain AC028_16910 IPR035919 EAL domain superfamily AC028_16910 IPR001633 EAL domain AC028_16910 IPR001294 Phytochrome AC028_16910 IPR013515 Phytochrome, central region AC028_16910 IPR000160 GGDEF domain AC028_16910 IPR029016 GAF-like domain superfamily AC028_16910 IPR016132 Phytochrome chromophore attachment domain AC028_16915 IPR002883 CBM10/dockerin domain AC028_16915 IPR036601 CBM10 superfamily AC028_16915 IPR009031 Carbohydrate binding module family 10 AC028_16915 IPR017853 Glycoside hydrolase superfamily AC028_16915 IPR018087 Glycoside hydrolase, family 5, conserved site AC028_16915 IPR001547 Glycoside hydrolase, family 5 AC028_16920 IPR011006 CheY-like superfamily AC028_16920 IPR001789 Signal transduction response regulator, receiver domain AC028_16930 IPR011005 Dihydropteroate synthase-like AC028_16930 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AC028_16930 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AC028_16935 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AC028_16935 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_16940 IPR020846 Major facilitator superfamily domain AC028_16940 IPR011701 Major facilitator superfamily AC028_16940 IPR005829 Sugar transporter, conserved site AC028_16940 IPR036259 MFS transporter superfamily AC028_16945 IPR015942 Asp/Glu/hydantoin racemase AC028_16945 IPR004380 Aspartate racemase AC028_16945 IPR033134 Asp/Glu racemase, active site 2 AC028_16945 IPR018187 Asp/Glu racemase, active site 1 AC028_16945 IPR001920 Asp/Glu racemase AC028_16950 IPR000620 EamA domain AC028_16955 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AC028_16955 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AC028_16955 IPR036318 FAD-binding, type PCMH-like superfamily AC028_16955 IPR016166 FAD-binding domain, PCMH-type AC028_16955 IPR016167 FAD-binding, type PCMH, subdomain 1 AC028_16955 IPR006094 FAD linked oxidase, N-terminal AC028_16955 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_16955 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AC028_16960 IPR013785 Aldolase-type TIM barrel AC028_16960 IPR005720 Dihydroorotate dehydrogenase domain AC028_16960 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AC028_16960 IPR005719 Dihydroorotate dehydrogenase, class 2 AC028_16960 IPR001295 Dihydroorotate dehydrogenase, conserved site AC028_16975 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria AC028_16975 IPR010061 Methylmalonate-semialdehyde dehydrogenase AC028_16975 IPR015590 Aldehyde dehydrogenase domain AC028_16975 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_16975 IPR016160 Aldehyde dehydrogenase, cysteine active site AC028_16975 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_16975 IPR016161 Aldehyde/histidinol dehydrogenase AC028_16985 IPR002559 Transposase, IS4-like AC028_16985 IPR008490 Transposase InsH, N-terminal AC028_16990 IPR009057 Homeobox-like domain superfamily AC028_16990 IPR002514 Transposase IS3/IS911family AC028_16995 IPR036397 Ribonuclease H superfamily AC028_16995 IPR025948 HTH-like domain AC028_16995 IPR001584 Integrase, catalytic core AC028_16995 IPR012337 Ribonuclease H-like superfamily AC028_17005 IPR002912 ACT domain AC028_17005 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain AC028_17005 IPR036393 Acetylglutamate kinase-like superfamily AC028_17005 IPR001048 Aspartate/glutamate/uridylate kinase AC028_17005 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AC028_17005 IPR036291 NAD(P)-binding domain superfamily AC028_17005 IPR019811 Homoserine dehydrogenase, conserved site AC028_17005 IPR001342 Homoserine dehydrogenase, catalytic AC028_17005 IPR027795 CASTOR, ACT domain AC028_17005 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AC028_17005 IPR018042 Aspartate kinase, conserved site AC028_17005 IPR001341 Aspartate kinase AC028_17010 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_17010 IPR013750 GHMP kinase, C-terminal domain AC028_17010 IPR036554 GHMP kinase, C-terminal domain superfamily AC028_17010 IPR006204 GHMP kinase N-terminal domain AC028_17010 IPR000870 Homoserine kinase AC028_17010 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_17020 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_17020 IPR004450 Threonine synthase-like AC028_17020 IPR037158 Threonine synthase, N-terminal domain superfamily AC028_17020 IPR029144 Threonine synthase, N-terminal AC028_17020 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AC028_17020 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_17030 IPR018490 Cyclic nucleotide-binding-like AC028_17030 IPR000595 Cyclic nucleotide-binding domain AC028_17030 IPR012318 Crp-type HTH domain AC028_17030 IPR014710 RmlC-like jelly roll fold AC028_17030 IPR018335 Transcription regulator HTH, Crp-type, conserved site AC028_17030 IPR036390 Winged helix DNA-binding domain superfamily AC028_17030 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_17035 IPR033656 Histidyl-anticodon-binding AC028_17035 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AC028_17035 IPR015807 Histidine-tRNA ligase AC028_17035 IPR036621 Anticodon-binding domain superfamily AC028_17035 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AC028_17035 IPR004154 Anticodon-binding AC028_17035 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_17045 IPR020621 ATP phosphoribosyltransferase HisG, long form AC028_17045 IPR013115 Histidine biosynthesis HisG, C-terminal AC028_17045 IPR018198 ATP phosphoribosyltransferase, conserved site AC028_17045 IPR013820 ATP phosphoribosyltransferase, catalytic domain AC028_17045 IPR001348 ATP phosphoribosyltransferase HisG AC028_17045 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_17050 IPR022695 Histidinol dehydrogenase, monofunctional AC028_17050 IPR001692 Histidinol dehydrogenase, conserved site AC028_17050 IPR012131 Histidinol dehydrogenase AC028_17050 IPR016161 Aldehyde/histidinol dehydrogenase AC028_17055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_17055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_17055 IPR015424 Pyridoxal phosphate-dependent transferase AC028_17055 IPR005861 Histidinol-phosphate aminotransferase family AC028_17055 IPR004839 Aminotransferase, class I/classII AC028_17060 IPR000807 Imidazoleglycerol-phosphate dehydratase AC028_17060 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AC028_17060 IPR006543 Histidinol-phosphate phosphatase AC028_17060 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_17060 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AC028_17060 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AC028_17060 IPR023214 HAD superfamily AC028_17060 IPR020566 Histidine biosynthesis bifunctional protein HisB AC028_17060 IPR005954 Histidinol-phosphatase AC028_17060 IPR036412 HAD-like superfamily AC028_17065 IPR010139 Imidazole glycerol phosphate synthase, subunit H AC028_17065 IPR017926 Glutamine amidotransferase AC028_17065 IPR029062 Class I glutamine amidotransferase-like AC028_17070 IPR006062 Histidine biosynthesis AC028_17070 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AC028_17070 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AC028_17070 IPR011060 Ribulose-phosphate binding barrel AC028_17070 IPR013785 Aldolase-type TIM barrel AC028_17075 IPR006062 Histidine biosynthesis AC028_17075 IPR004651 Histidine biosynthesis, HisF AC028_17075 IPR013785 Aldolase-type TIM barrel AC028_17075 IPR011060 Ribulose-phosphate binding barrel AC028_17080 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AC028_17080 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AC028_17080 IPR023019 Histidine biosynthesis bifunctional protein HisIE AC028_17080 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AC028_17080 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AC028_17100 IPR023943 Enolase-phosphatase E1 AC028_17100 IPR036412 HAD-like superfamily AC028_17100 IPR006439 HAD hydrolase, subfamily IA AC028_17100 IPR023214 HAD superfamily AC028_17105 IPR011051 RmlC-like cupin domain superfamily AC028_17105 IPR014710 RmlC-like jelly roll fold AC028_17105 IPR023956 Acireductone dioxygenase ARD, bacteria AC028_17105 IPR004313 Acireductone dioxygenase ARD family AC028_17110 IPR001303 Class II aldolase/adducin N-terminal AC028_17110 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AC028_17110 IPR017714 Methylthioribulose-1-phosphate dehydratase AC028_17115 IPR004758 Amino acid transporter AC028_17115 IPR002293 Amino acid/polyamine transporter I AC028_17120 IPR004758 Amino acid transporter AC028_17120 IPR002293 Amino acid/polyamine transporter I AC028_17130 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AC028_17130 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC028_17130 IPR002912 ACT domain AC028_17130 IPR036291 NAD(P)-binding domain superfamily AC028_17130 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AC028_17130 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_17135 IPR016166 FAD-binding domain, PCMH-type AC028_17135 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AC028_17135 IPR006094 FAD linked oxidase, N-terminal AC028_17135 IPR036318 FAD-binding, type PCMH-like superfamily AC028_17135 IPR016164 FAD-linked oxidase-like, C-terminal AC028_17135 IPR004490 Glycolate oxidase subunit GlcD AC028_17135 IPR004113 FAD-linked oxidase, C-terminal AC028_17155 IPR001059 Translation elongation factor P/YeiP, central AC028_17155 IPR013852 Translation elongation factor P/YeiP, conserved site AC028_17155 IPR012340 Nucleic acid-binding, OB-fold AC028_17155 IPR011897 Translation elongation factor P-like, YeiP AC028_17155 IPR014722 Ribosomal protein L2, domain 2 AC028_17155 IPR008991 Translation protein SH3-like domain superfamily AC028_17155 IPR015365 Elongation factor P, C-terminal AC028_17155 IPR020599 Translation elongation factor P/YeiP AC028_17155 IPR013185 Translation elongation factor, KOW-like AC028_17160 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_17160 IPR036291 NAD(P)-binding domain superfamily AC028_17160 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_17165 IPR000891 Pyruvate carboxyltransferase AC028_17165 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site AC028_17165 IPR013785 Aldolase-type TIM barrel AC028_17175 IPR001753 Enoyl-CoA hydratase/isomerase AC028_17175 IPR014748 Enoyl-CoA hydratase, C-terminal AC028_17175 IPR029045 ClpP/crotonase-like domain superfamily AC028_17175 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_17185 IPR003373 Ferrous iron transport protein B AC028_17185 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AC028_17185 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AC028_17185 IPR006073 GTP binding domain AC028_17185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17185 IPR011640 Ferrous iron transport protein B, C-terminal AC028_17200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_17200 IPR015424 Pyridoxal phosphate-dependent transferase AC028_17200 IPR004839 Aminotransferase, class I/classII AC028_17200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_17205 IPR005163 3-alpha domain AC028_17205 IPR011037 Pyruvate kinase-like, insert domain superfamily AC028_17205 IPR005302 Molybdenum cofactor sulfurase, C-terminal AC028_17210 IPR023940 Dihydrodipicolinate reductase AC028_17210 IPR036291 NAD(P)-binding domain superfamily AC028_17210 IPR022664 Dihydrodipicolinate reductase, conserved site AC028_17210 IPR000846 Dihydrodipicolinate reductase, N-terminal AC028_17210 IPR022663 Dihydrodipicolinate reductase, C-terminal AC028_17215 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AC028_17215 IPR017926 Glutamine amidotransferase AC028_17215 IPR029062 Class I glutamine amidotransferase-like AC028_17215 IPR006274 Carbamoyl-phosphate synthase, small subunit AC028_17215 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AC028_17215 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AC028_17225 IPR011761 ATP-grasp fold AC028_17225 IPR006275 Carbamoyl-phosphate synthase, large subunit AC028_17225 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AC028_17225 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AC028_17225 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AC028_17225 IPR011607 Methylglyoxal synthase-like domain AC028_17225 IPR016185 Pre-ATP-grasp domain superfamily AC028_17225 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AC028_17225 IPR036914 Methylglyoxal synthase-like domain superfamily AC028_17225 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AC028_17230 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AC028_17230 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AC028_17230 IPR006359 Transcription elongation factor GreA AC028_17230 IPR028624 Transcription elongation factor GreA/GreB AC028_17230 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AC028_17230 IPR023459 Transcription elongation factor GreA/GreB family AC028_17230 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AC028_17230 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AC028_17240 IPR041122 RecJ, OB domain AC028_17240 IPR001667 DDH domain AC028_17240 IPR004610 Bacterial RecJ exonuclease AC028_17240 IPR003156 DHHA1 domain AC028_17240 IPR038763 DHH phosphoesterase superfamily AC028_17250 IPR011006 CheY-like superfamily AC028_17250 IPR001789 Signal transduction response regulator, receiver domain AC028_17250 IPR007492 LytTR DNA-binding domain AC028_17255 IPR004374 Peptide chain release factor 2 AC028_17255 IPR000352 Peptide chain release factor class I AC028_17255 IPR005139 Peptide chain release factor AC028_17260 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AC028_17260 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_17260 IPR002313 Lysine-tRNA ligase, class II AC028_17260 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AC028_17260 IPR012340 Nucleic acid-binding, OB-fold AC028_17260 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AC028_17265 IPR011006 CheY-like superfamily AC028_17265 IPR003607 HD/PDEase domain AC028_17265 IPR001789 Signal transduction response regulator, receiver domain AC028_17265 IPR037522 HD-GYP domain AC028_17270 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_17270 IPR011006 CheY-like superfamily AC028_17270 IPR001789 Signal transduction response regulator, receiver domain AC028_17270 IPR036641 HPT domain superfamily AC028_17270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_17270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_17270 IPR005467 Histidine kinase domain AC028_17270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17270 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17275 IPR001789 Signal transduction response regulator, receiver domain AC028_17275 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_17275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17275 IPR036641 HPT domain superfamily AC028_17275 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_17275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_17275 IPR005467 Histidine kinase domain AC028_17275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17275 IPR011006 CheY-like superfamily AC028_17280 IPR001753 Enoyl-CoA hydratase/isomerase AC028_17280 IPR014748 Enoyl-CoA hydratase, C-terminal AC028_17280 IPR029045 ClpP/crotonase-like domain superfamily AC028_17280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AC028_17300 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AC028_17300 IPR036008 Aconitase, iron-sulfur domain AC028_17300 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AC028_17300 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AC028_17300 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_17300 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AC028_17300 IPR018136 Aconitase family, 4Fe-4S cluster binding site AC028_17315 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AC028_17315 IPR004406 Aconitase B AC028_17315 IPR015933 Aconitase B, HEAT-like domain AC028_17315 IPR036288 Aconitase B, HEAT-like domain superfamily AC028_17315 IPR015929 Aconitase B, swivel AC028_17315 IPR015932 Aconitase, domain 2 AC028_17315 IPR036008 Aconitase, iron-sulfur domain AC028_17315 IPR018136 Aconitase family, 4Fe-4S cluster binding site AC028_17315 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_17315 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AC028_17320 IPR029058 Alpha/Beta hydrolase fold AC028_17320 IPR000073 Alpha/beta hydrolase fold-1 AC028_17320 IPR019913 Pyrimidine utilisation protein RutD AC028_17325 IPR029787 Nucleotide cyclase AC028_17325 IPR005330 MHYT domain AC028_17325 IPR035919 EAL domain superfamily AC028_17325 IPR001633 EAL domain AC028_17325 IPR000160 GGDEF domain AC028_17330 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AC028_17330 IPR035909 Methylesterase CheB, C-terminal AC028_17330 IPR001789 Signal transduction response regulator, receiver domain AC028_17330 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_17330 IPR011006 CheY-like superfamily AC028_17335 IPR005659 Chemoreceptor glutamine deamidase CheD AC028_17335 IPR011324 Cytotoxic necrotizing factor-like, catalytic AC028_17335 IPR038592 CheD-like superfamily AC028_17340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_17340 IPR000780 MCP methyltransferase, CheR-type AC028_17340 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AC028_17340 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_17340 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_17340 IPR026024 Chemotaxis protein methyltransferase CheR AC028_17345 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17345 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17345 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17345 IPR003660 HAMP domain AC028_17345 IPR004090 Chemotaxis methyl-accepting receptor AC028_17345 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17355 IPR039315 Chemotaxis protein CheW AC028_17355 IPR002545 CheW-like domain AC028_17355 IPR036061 CheW-like domain superfamily AC028_17360 IPR009875 PilZ domain AC028_17360 IPR012349 FMN-binding split barrel AC028_17360 IPR023787 Type III secretion system flagellar brake protein YcgR AC028_17360 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AC028_17365 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17365 IPR003660 HAMP domain AC028_17365 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17365 IPR004090 Chemotaxis methyl-accepting receptor AC028_17365 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17370 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17370 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17370 IPR004090 Chemotaxis methyl-accepting receptor AC028_17370 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17370 IPR003660 HAMP domain AC028_17370 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17375 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17375 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17375 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17375 IPR003660 HAMP domain AC028_17375 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17375 IPR004090 Chemotaxis methyl-accepting receptor AC028_17380 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17380 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17380 IPR004090 Chemotaxis methyl-accepting receptor AC028_17380 IPR003660 HAMP domain AC028_17380 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17385 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17385 IPR003660 HAMP domain AC028_17385 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17385 IPR004090 Chemotaxis methyl-accepting receptor AC028_17385 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17395 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17395 IPR004090 Chemotaxis methyl-accepting receptor AC028_17395 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17395 IPR003660 HAMP domain AC028_17395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17395 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17410 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17410 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17410 IPR004090 Chemotaxis methyl-accepting receptor AC028_17410 IPR003660 HAMP domain AC028_17410 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17420 IPR003660 HAMP domain AC028_17420 IPR004090 Chemotaxis methyl-accepting receptor AC028_17420 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17420 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17420 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17425 IPR033480 Single Cache domain 2 AC028_17425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17425 IPR003660 HAMP domain AC028_17425 IPR004090 Chemotaxis methyl-accepting receptor AC028_17425 IPR004090 Chemotaxis methyl-accepting receptor AC028_17425 IPR003660 HAMP domain AC028_17425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17425 IPR033480 Single Cache domain 2 AC028_17440 IPR003660 HAMP domain AC028_17440 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_17440 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17440 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_17440 IPR004090 Chemotaxis methyl-accepting receptor AC028_17440 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_17445 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AC028_17445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17445 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17445 IPR002545 CheW-like domain AC028_17445 IPR036061 CheW-like domain superfamily AC028_17445 IPR015162 CheY binding AC028_17445 IPR035891 CheY-binding domain of CheA AC028_17445 IPR004105 Histidine kinase CheA-like, homodimeric domain AC028_17445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17445 IPR036641 HPT domain superfamily AC028_17445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_17445 IPR005467 Histidine kinase domain AC028_17445 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_17450 IPR001789 Signal transduction response regulator, receiver domain AC028_17450 IPR011006 CheY-like superfamily AC028_17460 IPR036061 CheW-like domain superfamily AC028_17460 IPR002545 CheW-like domain AC028_17460 IPR039315 Chemotaxis protein CheW AC028_17465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17465 IPR025669 AAA domain AC028_17470 IPR036737 OmpA-like domain superfamily AC028_17470 IPR006665 OmpA-like domain AC028_17470 IPR025713 Motility protein B, N-terminal domain AC028_17475 IPR002898 MotA/TolQ/ExbB proton channel AC028_17475 IPR000540 Flagellar motor protein MotA, conserved site AC028_17500 IPR009057 Homeobox-like domain superfamily AC028_17500 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_17500 IPR002514 Transposase IS3/IS911family AC028_17505 IPR036397 Ribonuclease H superfamily AC028_17505 IPR012337 Ribonuclease H-like superfamily AC028_17505 IPR001584 Integrase, catalytic core AC028_17505 IPR025948 HTH-like domain AC028_17545 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AC028_17545 IPR004105 Histidine kinase CheA-like, homodimeric domain AC028_17545 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily AC028_17545 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_17545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17545 IPR036641 HPT domain superfamily AC028_17545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_17545 IPR005467 Histidine kinase domain AC028_17545 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding AC028_17545 IPR036061 CheW-like domain superfamily AC028_17545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17545 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17545 IPR002545 CheW-like domain AC028_17545 IPR035891 CheY-binding domain of CheA AC028_17550 IPR007439 Chemotaxis phosphatase, CheZ AC028_17555 IPR001789 Signal transduction response regulator, receiver domain AC028_17555 IPR011006 CheY-like superfamily AC028_17560 IPR014284 RNA polymerase sigma-70 like domain AC028_17560 IPR000943 RNA polymerase sigma-70 AC028_17560 IPR007627 RNA polymerase sigma-70 region 2 AC028_17560 IPR007624 RNA polymerase sigma-70 region 3 AC028_17560 IPR007630 RNA polymerase sigma-70 region 4 AC028_17560 IPR012845 RNA polymerase sigma factor, FliA/WhiG AC028_17560 IPR013325 RNA polymerase sigma factor, region 2 AC028_17560 IPR013324 RNA polymerase sigma factor, region 3/4-like AC028_17560 IPR028617 RNA polymerase sigma factor FliA AC028_17565 IPR025501 ATP binding protein MinD AC028_17565 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AC028_17565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17570 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AC028_17570 IPR003593 AAA+ ATPase domain AC028_17570 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17570 IPR020006 Flagellar biosynthesis protein FlhF AC028_17575 IPR001712 Type III secretion system FHIPEP AC028_17575 IPR006301 Flagellar biosynthesis protein FlhA AC028_17575 IPR025505 FHIPEP conserved site AC028_17575 IPR042196 FHIPEP, domain 4 AC028_17575 IPR042193 FHIPEP, domain 3 AC028_17575 IPR042194 FHIPEP, domain 1 AC028_17580 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_17580 IPR006135 Type III secretion system substrate exporter AC028_17580 IPR006136 Flagellar biosynthetic protein FlhB AC028_17585 IPR029787 Nucleotide cyclase AC028_17585 IPR005330 MHYT domain AC028_17585 IPR000160 GGDEF domain AC028_17585 IPR035919 EAL domain superfamily AC028_17585 IPR001633 EAL domain AC028_17590 IPR000014 PAS domain AC028_17590 IPR035965 PAS domain superfamily AC028_17590 IPR005330 MHYT domain AC028_17590 IPR000160 GGDEF domain AC028_17590 IPR029787 Nucleotide cyclase AC028_17590 IPR035919 EAL domain superfamily AC028_17590 IPR001633 EAL domain AC028_17605 IPR002010 Type III secretion system inner membrane R protein AC028_17605 IPR006303 Flagellar biosynthesis protein FliR AC028_17610 IPR006305 Flagellar biosynthesis protein FliQ AC028_17610 IPR002191 Bacterial export protein family 3 AC028_17620 IPR005838 Type III secretion system inner membrane P protein AC028_17620 IPR005837 Flagellar transport protein FliP AC028_17625 IPR022781 Flagellar biosynthesis protein, FliO AC028_17630 IPR012826 Flagellar motor switch FliN AC028_17630 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AC028_17630 IPR001543 Surface presentation of antigen (SpoA) AC028_17630 IPR036429 SpoA-like superfamily AC028_17635 IPR028976 CheC-like superfamily AC028_17635 IPR001689 Flagellar motor switch protein FliM AC028_17635 IPR001543 Surface presentation of antigen (SpoA) AC028_17635 IPR036429 SpoA-like superfamily AC028_17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17655 IPR040627 T3SS EscN ATPase, C-terminal AC028_17655 IPR003593 AAA+ ATPase domain AC028_17655 IPR032463 ATPase, type III secretion system, FliI AC028_17655 IPR005714 ATPase, type III secretion system, FliI/YscN AC028_17655 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AC028_17655 IPR020005 Flagellar export ATPase FliI, clade 1 AC028_17655 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AC028_17665 IPR023087 Flagellar motor switch protein FliG, C-terminal AC028_17665 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_17665 IPR032779 Flagellar motor switch protein FliG, middle domain AC028_17665 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AC028_17665 IPR000090 Flagellar motor switch protein FliG AC028_17670 IPR006182 Secretory protein YscJ/FliF AC028_17670 IPR013556 Flagellar M-ring C-terminal AC028_17670 IPR000067 Flagellar M-ring protein FliF AC028_17675 IPR001624 Flagellar hook-basal body complex protein FliE AC028_17680 IPR001296 Glycosyl transferase, family 1 AC028_17680 IPR001173 Glycosyltransferase 2-like AC028_17680 IPR029044 Nucleotide-diphospho-sugar transferases AC028_17690 IPR012337 Ribonuclease H-like superfamily AC028_17690 IPR001584 Integrase, catalytic core AC028_17690 IPR025948 HTH-like domain AC028_17690 IPR036397 Ribonuclease H superfamily AC028_17695 IPR009057 Homeobox-like domain superfamily AC028_17695 IPR002514 Transposase IS3/IS911family AC028_17695 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_17735 IPR002559 Transposase, IS4-like AC028_17735 IPR008490 Transposase InsH, N-terminal AC028_17745 IPR036291 NAD(P)-binding domain superfamily AC028_17745 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_17745 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_17750 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC028_17750 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AC028_17750 IPR016039 Thiolase-like AC028_17750 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AC028_17760 IPR015424 Pyridoxal phosphate-dependent transferase AC028_17760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_17760 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_17765 IPR011006 CheY-like superfamily AC028_17765 IPR009057 Homeobox-like domain superfamily AC028_17765 IPR002197 DNA binding HTH domain, Fis-type AC028_17765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_17765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_17765 IPR003593 AAA+ ATPase domain AC028_17765 IPR010114 DNA-binding transcriptional regulator NtrC AC028_17765 IPR025944 Sigma-54 interaction domain, conserved site AC028_17765 IPR001789 Signal transduction response regulator, receiver domain AC028_17765 IPR002078 RNA polymerase sigma factor 54 interaction domain AC028_17770 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AC028_17770 IPR035909 Methylesterase CheB, C-terminal AC028_17770 IPR001789 Signal transduction response regulator, receiver domain AC028_17770 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AC028_17770 IPR011006 CheY-like superfamily AC028_17775 IPR007634 RNA polymerase sigma factor 54, DNA-binding AC028_17775 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AC028_17775 IPR007046 RNA polymerase sigma factor 54, core-binding domain AC028_17775 IPR000394 RNA polymerase sigma factor 54 AC028_17780 IPR011006 CheY-like superfamily AC028_17780 IPR016032 Signal transduction response regulator, C-terminal effector AC028_17780 IPR000792 Transcription regulator LuxR, C-terminal AC028_17780 IPR001789 Signal transduction response regulator, receiver domain AC028_17795 IPR003713 Flagellar protein FliS AC028_17795 IPR036584 Flagellar protein FliS superfamily AC028_17800 IPR010810 Flagellin hook, IN motif AC028_17800 IPR040026 Flagellar hook-associated protein 2 AC028_17800 IPR010809 Flagellar hook-associated protein 2, C-terminal AC028_17800 IPR003481 Flagellar hook-associated protein 2, N-terminal AC028_17805 IPR001029 Flagellin, D0/D1 domain AC028_17805 IPR001492 Flagellin AC028_17810 IPR001029 Flagellin, D0/D1 domain AC028_17810 IPR013384 Flagellar hook-associated protein 3 AC028_17815 IPR002371 Flagellar hook-associated protein 1 AC028_17815 IPR010810 Flagellin hook, IN motif AC028_17815 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_17820 IPR019301 Flagellar protein FlgJ, N-terminal AC028_17820 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AC028_17820 IPR013377 Peptidoglycan hydrolase FlgJ AC028_17825 IPR001782 Flagellar P-ring protein AC028_17830 IPR000527 Flagellar L-ring protein AC028_17835 IPR001444 Flagellar basal body rod protein, N-terminal AC028_17835 IPR019776 Flagellar basal body rod protein, conserved site AC028_17835 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_17835 IPR012834 Flagellar basal-body rod FlgG AC028_17835 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AC028_17835 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AC028_17840 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_17840 IPR019776 Flagellar basal body rod protein, conserved site AC028_17840 IPR001444 Flagellar basal body rod protein, N-terminal AC028_17840 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AC028_17840 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AC028_17845 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AC028_17845 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_17845 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AC028_17845 IPR019776 Flagellar basal body rod protein, conserved site AC028_17845 IPR037058 Flagellar hook protein FlgE superfamily AC028_17845 IPR011491 Flagellar hook protein FlgE AC028_17845 IPR001444 Flagellar basal body rod protein, N-terminal AC028_17850 IPR005648 Flagellar hook capping protein AC028_17855 IPR006299 Flagellar basal-body rod protein FlgC AC028_17855 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_17855 IPR019776 Flagellar basal body rod protein, conserved site AC028_17855 IPR001444 Flagellar basal body rod protein, N-terminal AC028_17860 IPR006300 Flagellar basal-body rod protein FlgB AC028_17860 IPR019776 Flagellar basal body rod protein, conserved site AC028_17865 IPR001789 Signal transduction response regulator, receiver domain AC028_17865 IPR002545 CheW-like domain AC028_17865 IPR036061 CheW-like domain superfamily AC028_17865 IPR011006 CheY-like superfamily AC028_17865 IPR024181 Chemotaxis response regulator CheV AC028_17885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_17885 IPR000014 PAS domain AC028_17885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_17885 IPR035965 PAS domain superfamily AC028_17885 IPR013767 PAS fold AC028_17885 IPR005467 Histidine kinase domain AC028_17885 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17890 IPR001633 EAL domain AC028_17890 IPR029787 Nucleotide cyclase AC028_17890 IPR005330 MHYT domain AC028_17890 IPR000160 GGDEF domain AC028_17890 IPR035919 EAL domain superfamily AC028_17895 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AC028_17895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_17895 IPR005467 Histidine kinase domain AC028_17895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_17895 IPR017203 Signal transduction histidine kinase, NreB AC028_17895 IPR003594 Histidine kinase/HSP90-like ATPase AC028_17900 IPR035919 EAL domain superfamily AC028_17900 IPR005330 MHYT domain AC028_17900 IPR000160 GGDEF domain AC028_17900 IPR001633 EAL domain AC028_17900 IPR029787 Nucleotide cyclase AC028_17910 IPR004090 Chemotaxis methyl-accepting receptor AC028_17910 IPR003660 HAMP domain AC028_17910 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AC028_17910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_17910 IPR000727 Target SNARE coiled-coil homology domain AC028_17915 IPR007451 High frequency lysogenization protein HflD AC028_17915 IPR035932 HflD-like superfamily AC028_17920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_17920 IPR023382 Adenine nucleotide alpha hydrolase-like domains AC028_17920 IPR004506 tRNA-specific 2-thiouridylase AC028_17925 IPR020476 NUDIX hydrolase AC028_17925 IPR000086 NUDIX hydrolase domain AC028_17925 IPR015797 NUDIX hydrolase-like domain superfamily AC028_17925 IPR033713 Phosphatase NudJ AC028_17925 IPR020084 NUDIX hydrolase, conserved site AC028_17930 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AC028_17930 IPR003769 Adaptor protein ClpS, core AC028_17930 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_17935 IPR019489 Clp ATPase, C-terminal AC028_17935 IPR003959 ATPase, AAA-type, core AC028_17935 IPR036628 Clp, N-terminal domain superfamily AC028_17935 IPR003593 AAA+ ATPase domain AC028_17935 IPR041546 ClpA/ClpB, AAA lid domain AC028_17935 IPR028299 ClpA/B, conserved site 2 AC028_17935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17935 IPR001270 ClpA/B family AC028_17935 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AC028_17935 IPR018368 ClpA/B, conserved site 1 AC028_17935 IPR004176 Clp, N-terminal AC028_17940 IPR004368 Translation initiation factor IF-1 AC028_17940 IPR022967 RNA-binding domain, S1 AC028_17940 IPR012340 Nucleic acid-binding, OB-fold AC028_17940 IPR006196 RNA-binding domain, S1, IF1 type AC028_17945 IPR016181 Acyl-CoA N-acyltransferase AC028_17945 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AC028_17945 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal AC028_17955 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_17955 IPR023753 FAD/NAD(P)-binding domain AC028_17955 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AC028_17955 IPR005982 Thioredoxin reductase AC028_17960 IPR036390 Winged helix DNA-binding domain superfamily AC028_17960 IPR003593 AAA+ ATPase domain AC028_17960 IPR018541 FtsK gamma domain AC028_17960 IPR025199 DNA translocase FtsK, 4TM region AC028_17960 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17960 IPR002543 FtsK domain AC028_17960 IPR041027 FtsK alpha domain AC028_17960 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_17970 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AC028_17970 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AC028_17970 IPR029046 Lipoprotein localisation LolA/LolB/LppX AC028_17980 IPR021886 MgsA AAA+ ATPase C-terminal AC028_17980 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AC028_17980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_17980 IPR032423 AAA C-terminal domain AC028_17980 IPR003593 AAA+ ATPase domain AC028_17980 IPR003959 ATPase, AAA-type, core AC028_17985 IPR003691 Putative fluoride ion transporter CrcB AC028_17990 IPR020613 Thiolase, conserved site AC028_17990 IPR002155 Thiolase AC028_17990 IPR020615 Thiolase, acyl-enzyme intermediate active site AC028_17990 IPR020610 Thiolase, active site AC028_17990 IPR020617 Thiolase, C-terminal AC028_17990 IPR016039 Thiolase-like AC028_17990 IPR020616 Thiolase, N-terminal AC028_17995 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AC028_17995 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AC028_17995 IPR036291 NAD(P)-binding domain superfamily AC028_17995 IPR001753 Enoyl-CoA hydratase/isomerase AC028_17995 IPR029045 ClpP/crotonase-like domain superfamily AC028_17995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_17995 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AC028_18005 IPR034907 Nucleoside diphosphate kinase-like domain AC028_18005 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AC028_18005 IPR023005 Nucleoside diphosphate kinase, active site AC028_18005 IPR001564 Nucleoside diphosphate kinase AC028_18010 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AC028_18010 IPR007197 Radical SAM AC028_18010 IPR040072 Methyltransferase (Class A) AC028_18010 IPR013785 Aldolase-type TIM barrel AC028_18010 IPR027492 Dual-specificity RNA methyltransferase RlmN AC028_18020 IPR001387 Cro/C1-type helix-turn-helix domain AC028_18020 IPR025194 Domain of unknown function DUF4115 AC028_18020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_18020 IPR023690 Cytoskeleton protein RodZ AC028_18030 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AC028_18030 IPR002372 Pyrrolo-quinoline quinone repeat AC028_18030 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_18030 IPR017687 Outer membrane protein assembly factor BamB AC028_18030 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_18035 IPR005225 Small GTP-binding protein domain AC028_18035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18035 IPR015946 K homology domain-like, alpha/beta AC028_18035 IPR032859 GTPase Der, C-terminal KH-domain-like AC028_18035 IPR006073 GTP binding domain AC028_18035 IPR016484 GTP-binding protein EngA AC028_18035 IPR031166 EngA-type guanine nucleotide-binding (G) domain AC028_18035 IPR003593 AAA+ ATPase domain AC028_18040 IPR036425 MoaB/Mog-like domain superfamily AC028_18040 IPR001453 MoaB/Mog domain AC028_18040 IPR008284 Molybdenum cofactor biosynthesis, conserved site AC028_18040 IPR038987 Molybdopterin biosynthesis protein MoeA-like AC028_18040 IPR005111 MoeA, C-terminal, domain IV AC028_18040 IPR036688 MoeA, C-terminal, domain IV superfamily AC028_18040 IPR005110 MoeA, N-terminal and linker domain AC028_18040 IPR036135 MoeA, N-terminal and linker domain superfamily AC028_18045 IPR000594 THIF-type NAD/FAD binding fold AC028_18045 IPR035985 Ubiquitin-activating enzyme AC028_18070 IPR027399 Alcohol dehydrogenase GroES-associated AC028_18070 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AC028_18070 IPR011032 GroES-like superfamily AC028_18070 IPR036291 NAD(P)-binding domain superfamily AC028_18070 IPR013154 Alcohol dehydrogenase, N-terminal AC028_18070 IPR013149 Alcohol dehydrogenase, C-terminal AC028_18080 IPR037493 Exodeoxyribonuclease III-like AC028_18080 IPR005135 Endonuclease/exonuclease/phosphatase AC028_18080 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AC028_18080 IPR004808 AP endonuclease 1 AC028_18080 IPR020848 AP endonuclease 1, conserved site AC028_18080 IPR020847 AP endonuclease 1, binding site AC028_18090 IPR036425 MoaB/Mog-like domain superfamily AC028_18090 IPR001453 MoaB/Mog domain AC028_18090 IPR036688 MoeA, C-terminal, domain IV superfamily AC028_18090 IPR005111 MoeA, C-terminal, domain IV AC028_18090 IPR008284 Molybdenum cofactor biosynthesis, conserved site AC028_18090 IPR036135 MoeA, N-terminal and linker domain superfamily AC028_18090 IPR038987 Molybdopterin biosynthesis protein MoeA-like AC028_18090 IPR005110 MoeA, N-terminal and linker domain AC028_18095 IPR025877 MobA-like NTP transferase AC028_18095 IPR029044 Nucleotide-diphospho-sugar transferases AC028_18095 IPR013482 Molybdenum cofactor guanylyltransferase AC028_18110 IPR036291 NAD(P)-binding domain superfamily AC028_18110 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_18110 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_18115 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_18120 IPR029058 Alpha/Beta hydrolase fold AC028_18120 IPR000073 Alpha/beta hydrolase fold-1 AC028_18120 IPR000639 Epoxide hydrolase-like AC028_18125 IPR001046 NRAMP family AC028_18130 IPR001367 Iron dependent repressor, metal binding and dimerisation domain AC028_18130 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily AC028_18130 IPR036390 Winged helix DNA-binding domain superfamily AC028_18130 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_18130 IPR022689 Iron dependent repressor AC028_18130 IPR022687 DTXR-type HTH domain AC028_18135 IPR016192 APOBEC/CMP deaminase, zinc-binding AC028_18135 IPR016193 Cytidine deaminase-like AC028_18135 IPR028883 tRNA-specific adenosine deaminase AC028_18135 IPR002125 Cytidine and deoxycytidylate deaminase domain AC028_18140 IPR036397 Ribonuclease H superfamily AC028_18140 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_18140 IPR012337 Ribonuclease H-like superfamily AC028_18140 IPR022894 Oligoribonuclease AC028_18145 IPR006685 Mechanosensitive ion channel MscS AC028_18145 IPR011066 Mechanosensitive ion channel MscS, C-terminal AC028_18145 IPR010920 LSM domain superfamily AC028_18145 IPR008910 Conserved TM helix AC028_18145 IPR023408 Mechanosensitive ion channel MscS domain superfamily AC028_18145 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AC028_18145 IPR006686 Mechanosensitive ion channel MscS, conserved site AC028_18150 IPR023151 PEP-utilising enzyme, conserved site AC028_18150 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AC028_18150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_18150 IPR040442 Pyruvate kinase-like domain superfamily AC028_18150 IPR036637 Phosphohistidine domain superfamily AC028_18150 IPR013815 ATP-grasp fold, subdomain 1 AC028_18150 IPR018274 PEP-utilising enzyme, active site AC028_18150 IPR000121 PEP-utilising enzyme, C-terminal AC028_18150 IPR008279 PEP-utilising enzyme, mobile domain AC028_18150 IPR006319 Phosphoenolpyruvate synthase AC028_18155 IPR005177 Bifunctional kinase-pyrophosphorylase AC028_18155 IPR026530 Phosphoenolpyruvate synthase regulatory protein AC028_18170 IPR036291 NAD(P)-binding domain superfamily AC028_18170 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_18170 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_18170 IPR011294 3-hydroxybutyrate dehydrogenase AC028_18175 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AC028_18175 IPR000462 CDP-alcohol phosphatidyltransferase AC028_18185 IPR000073 Alpha/beta hydrolase fold-1 AC028_18185 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit AC028_18185 IPR029058 Alpha/Beta hydrolase fold AC028_18200 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_18200 IPR006076 FAD dependent oxidoreductase AC028_18200 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AC028_18200 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AC028_18200 IPR005805 Rieske iron-sulphur protein, C-terminal AC028_18200 IPR038010 YhfW, C-terminal Rieske domain AC028_18210 IPR023319 Tex-like protein, HTH domain superfamily AC028_18210 IPR018974 Tex-like protein, N-terminal AC028_18210 IPR032639 Tex protein, YqgF-like domain AC028_18210 IPR006641 YqgF/RNase H-like domain AC028_18210 IPR037027 YqgF/RNase H-like domain superfamily AC028_18210 IPR012337 Ribonuclease H-like superfamily AC028_18210 IPR012340 Nucleic acid-binding, OB-fold AC028_18210 IPR003029 S1 domain AC028_18210 IPR010994 RuvA domain 2-like AC028_18210 IPR041692 HHH domain 9 AC028_18210 IPR023323 Tex-like domain superfamily AC028_18210 IPR022967 RNA-binding domain, S1 AC028_18260 IPR009056 Cytochrome c-like domain AC028_18260 IPR036909 Cytochrome c-like domain superfamily AC028_18270 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_18270 IPR006143 RND efflux pump, membrane fusion protein AC028_18275 IPR001036 Acriflavin resistance protein AC028_18275 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_18280 IPR001036 Acriflavin resistance protein AC028_18280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_18280 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AC028_18285 IPR000887 KDPG/KHG aldolase AC028_18285 IPR013785 Aldolase-type TIM barrel AC028_18285 IPR031338 KDPG/KHG aldolase, active site 2 AC028_18285 IPR031337 KDPG/KHG aldolase, active site 1 AC028_18290 IPR004786 6-phosphogluconate dehydratase AC028_18290 IPR042096 Dihydroxy-acid dehydratase, C-terminal AC028_18290 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AC028_18290 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AC028_18290 IPR037237 IlvD/EDD, N-terminal domain AC028_18295 IPR005900 6-phosphogluconolactonase, DevB-type AC028_18295 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AC028_18295 IPR037171 NagB/RpiA transferase-like AC028_18295 IPR039104 6-Phosphogluconolactonase AC028_18300 IPR003836 Glucokinase AC028_18305 IPR001282 Glucose-6-phosphate dehydrogenase AC028_18305 IPR036291 NAD(P)-binding domain superfamily AC028_18305 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AC028_18305 IPR019796 Glucose-6-phosphate dehydrogenase, active site AC028_18305 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AC028_18310 IPR003439 ABC transporter-like AC028_18310 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC AC028_18310 IPR008995 Molybdate/tungstate binding, C-terminal AC028_18310 IPR003593 AAA+ ATPase domain AC028_18310 IPR040582 MalK, OB fold domain AC028_18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18310 IPR017871 ABC transporter, conserved site AC028_18315 IPR023758 tRNA-modifying protein YgfZ AC028_18315 IPR006222 Aminomethyltransferase, folate-binding domain AC028_18315 IPR017703 YgfZ/GcvT conserved site AC028_18315 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AC028_18320 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AC028_18320 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AC028_18320 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AC028_18320 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AC028_18325 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AC028_18325 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor AC028_18325 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AC028_18330 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AC028_18330 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AC028_18330 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AC028_18330 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AC028_18330 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_18330 IPR011281 Succinate dehydrogenase, flavoprotein subunit AC028_18330 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AC028_18330 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AC028_18340 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_18340 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_18340 IPR012675 Beta-grasp domain superfamily AC028_18340 IPR009051 Alpha-helical ferredoxin AC028_18340 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AC028_18340 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AC028_18340 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_18340 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AC028_18340 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_18345 IPR036714 Flavinator of succinate dehydrogenase superfamily AC028_18345 IPR005631 Flavinator of succinate dehydrogenase AC028_18355 IPR003838 ABC transporter permease protein domain AC028_18355 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E AC028_18355 IPR025857 MacB-like periplasmic core domain AC028_18360 IPR015854 ABC transporter, lipoprotein release, LolD AC028_18360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18360 IPR003439 ABC transporter-like AC028_18360 IPR003593 AAA+ ATPase domain AC028_18360 IPR011924 Lipoprotein releasing system, ATP-binding protein AC028_18370 IPR035681 ComA-like, MBL domain AC028_18370 IPR004797 Competence protein ComEC/Rec2 AC028_18370 IPR001279 Metallo-beta-lactamase AC028_18370 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_18370 IPR004477 ComEC/Rec2-related protein AC028_18375 IPR002898 MotA/TolQ/ExbB proton channel AC028_18380 IPR003400 Biopolymer transport protein ExbD/TolR AC028_18385 IPR003439 ABC transporter-like AC028_18385 IPR039421 Type I protein exporter AC028_18385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18385 IPR003593 AAA+ ATPase domain AC028_18385 IPR011917 ABC transporter, lipid A export, MsbA AC028_18385 IPR017871 ABC transporter, conserved site AC028_18385 IPR011527 ABC transporter type 1, transmembrane domain AC028_18385 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_18390 IPR003758 Tetraacyldisaccharide 4'-kinase AC028_18390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18395 IPR029044 Nucleotide-diphospho-sugar transferases AC028_18395 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AC028_18395 IPR003329 Acylneuraminate cytidylyltransferase AC028_18400 IPR017867 Protein-tyrosine phosphatase, low molecular weight AC028_18400 IPR036196 Phosphotyrosine protein phosphatase I superfamily AC028_18400 IPR023485 Phosphotyrosine protein phosphatase I AC028_18410 IPR002514 Transposase IS3/IS911family AC028_18410 IPR009057 Homeobox-like domain superfamily AC028_18410 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_18415 IPR012337 Ribonuclease H-like superfamily AC028_18415 IPR001584 Integrase, catalytic core AC028_18415 IPR025948 HTH-like domain AC028_18415 IPR036397 Ribonuclease H superfamily AC028_18425 IPR010994 RuvA domain 2-like AC028_18425 IPR001162 UvrC family homology region AC028_18425 IPR004791 UvrABC system, subunit C AC028_18425 IPR036876 UVR domain superfamily AC028_18425 IPR001943 UVR domain AC028_18425 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AC028_18425 IPR035901 GIY-YIG endonuclease superfamily AC028_18425 IPR000305 GIY-YIG endonuclease AC028_18425 IPR038476 UvrC homology region 2 superfamily AC028_18430 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AC028_18430 IPR000462 CDP-alcohol phosphatidyltransferase AC028_18430 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AC028_18455 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase AC028_18455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AC028_18455 IPR036291 NAD(P)-binding domain superfamily AC028_18455 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AC028_18455 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AC028_18455 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AC028_18455 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AC028_18455 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AC028_18465 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AC028_18480 IPR000792 Transcription regulator LuxR, C-terminal AC028_18480 IPR001789 Signal transduction response regulator, receiver domain AC028_18480 IPR016032 Signal transduction response regulator, C-terminal effector AC028_18480 IPR011006 CheY-like superfamily AC028_18490 IPR006225 Pseudouridine synthase, RluC/RluD AC028_18490 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AC028_18490 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_18490 IPR002942 RNA-binding S4 domain AC028_18490 IPR036986 RNA-binding S4 domain superfamily AC028_18490 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_18495 IPR021728 Protein of unknown function DUF3300 AC028_18500 IPR003689 Zinc/iron permease AC028_18500 IPR023498 Zinc transporter ZupT AC028_18510 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily AC028_18510 IPR001533 Pterin 4 alpha carbinolamine dehydratase AC028_18515 IPR035903 HesB-like domain superfamily AC028_18515 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AC028_18515 IPR017726 Fe/S biogenesis protein NfuA AC028_18515 IPR034904 Fe-S cluster assembly domain superfamily AC028_18535 IPR031304 Transglycosylase SLT domain 2 AC028_18535 IPR011757 Lytic transglycosylase MltB AC028_18535 IPR023346 Lysozyme-like domain superfamily AC028_18540 IPR002513 Tn3 transposase DDE domain AC028_18540 IPR025296 Domain of unknown function DUF4158 AC028_18565 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_18565 IPR002938 FAD-binding domain AC028_18570 IPR011102 Signal transduction histidine kinase, HWE region AC028_18570 IPR000014 PAS domain AC028_18570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_18570 IPR003594 Histidine kinase/HSP90-like ATPase AC028_18570 IPR035965 PAS domain superfamily AC028_18570 IPR000700 PAS-associated, C-terminal AC028_18570 IPR001610 PAC motif AC028_18585 IPR008490 Transposase InsH, N-terminal AC028_18585 IPR002559 Transposase, IS4-like AC028_18605 IPR036390 Winged helix DNA-binding domain superfamily AC028_18605 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_18605 IPR000847 Transcription regulator HTH, LysR AC028_18605 IPR005119 LysR, substrate-binding AC028_18615 IPR002514 Transposase IS3/IS911family AC028_18615 IPR009057 Homeobox-like domain superfamily AC028_18640 IPR036291 NAD(P)-binding domain superfamily AC028_18640 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_18640 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_18645 IPR027424 Glucose Oxidase, domain 2 AC028_18645 IPR012132 Glucose-methanol-choline oxidoreductase AC028_18645 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AC028_18645 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AC028_18645 IPR011533 Oxygen-dependent choline dehydrogenase AC028_18645 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_18650 IPR029058 Alpha/Beta hydrolase fold AC028_18650 IPR000073 Alpha/beta hydrolase fold-1 AC028_18650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_18650 IPR013216 Methyltransferase type 11 AC028_18650 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AC028_18690 IPR001610 PAC motif AC028_18690 IPR029787 Nucleotide cyclase AC028_18690 IPR001633 EAL domain AC028_18690 IPR035919 EAL domain superfamily AC028_18690 IPR000160 GGDEF domain AC028_18690 IPR000014 PAS domain AC028_18690 IPR000700 PAS-associated, C-terminal AC028_18690 IPR013655 PAS fold-3 AC028_18690 IPR013656 PAS fold-4 AC028_18690 IPR035965 PAS domain superfamily AC028_18710 IPR009078 Ferritin-like superfamily AC028_18710 IPR012347 Ferritin-like AC028_18710 IPR010287 Domain of unknown function DUF892 AC028_18725 IPR000878 Tetrapyrrole methylase AC028_18725 IPR014777 Tetrapyrrole methylase, subdomain 1 AC028_18725 IPR014776 Tetrapyrrole methylase, subdomain 2 AC028_18725 IPR035996 Tetrapyrrole methylase superfamily AC028_18725 IPR006366 Uroporphyrin-III C-methyltransferase AC028_18725 IPR036291 NAD(P)-binding domain superfamily AC028_18725 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AC028_18725 IPR006367 Sirohaem synthase, N-terminal AC028_18725 IPR019478 Sirohaem synthase, dimerisation domain AC028_18725 IPR028281 Siroheme synthase, central domain AC028_18725 IPR012409 Sirohaem synthase AC028_18740 IPR010290 Transmembrane secretion effector AC028_18740 IPR036259 MFS transporter superfamily AC028_18740 IPR020846 Major facilitator superfamily domain AC028_18745 IPR013108 Amidohydrolase 3 AC028_18745 IPR032466 Metal-dependent hydrolase AC028_18745 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_18755 IPR000868 Isochorismatase-like AC028_18755 IPR036380 Isochorismatase-like superfamily AC028_18760 IPR018062 HTH domain AraC-type, conserved site AC028_18760 IPR018060 DNA binding HTH domain, AraC-type AC028_18760 IPR009057 Homeobox-like domain superfamily AC028_18795 IPR005119 LysR, substrate-binding AC028_18795 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AC028_18795 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_18795 IPR036390 Winged helix DNA-binding domain superfamily AC028_18795 IPR000847 Transcription regulator HTH, LysR AC028_18800 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AC028_18800 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal AC028_18800 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AC028_18800 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AC028_18800 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_18805 IPR018752 Uncharacterised protein family UPF0753 AC028_18825 IPR012337 Ribonuclease H-like superfamily AC028_18825 IPR001584 Integrase, catalytic core AC028_18825 IPR025948 HTH-like domain AC028_18825 IPR036397 Ribonuclease H superfamily AC028_18830 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_18830 IPR009057 Homeobox-like domain superfamily AC028_18830 IPR002514 Transposase IS3/IS911family AC028_18860 IPR002104 Integrase, catalytic domain AC028_18860 IPR038488 Integrase, DNA-binding domain superfamily AC028_18860 IPR025166 Integrase, DNA-binding domain AC028_18860 IPR011010 DNA breaking-rejoining enzyme, catalytic core AC028_18860 IPR010998 Integrase/recombinase, N-terminal AC028_18860 IPR013762 Integrase-like, catalytic domain superfamily AC028_18865 IPR001674 GMP synthase, C-terminal AC028_18865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_18865 IPR029062 Class I glutamine amidotransferase-like AC028_18865 IPR022955 GMP synthase AC028_18865 IPR025777 GMP synthetase ATP pyrophosphatase domain AC028_18865 IPR022310 NAD/GMP synthase AC028_18865 IPR017926 Glutamine amidotransferase AC028_18865 IPR004739 GMP synthase, glutamine amidotransferase AC028_18870 IPR005990 Inosine-5'-monophosphate dehydrogenase AC028_18870 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AC028_18870 IPR013785 Aldolase-type TIM barrel AC028_18870 IPR000644 CBS domain AC028_18870 IPR001093 IMP dehydrogenase/GMP reductase AC028_18875 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AC028_18875 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC028_18875 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC028_18875 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AC028_18875 IPR036291 NAD(P)-binding domain superfamily AC028_18885 IPR003148 Regulator of K+ conductance, N-terminal AC028_18885 IPR036291 NAD(P)-binding domain superfamily AC028_18885 IPR038770 Sodium/solute symporter superfamily AC028_18885 IPR004771 K+/H+ exchanger AC028_18885 IPR006153 Cation/H+ exchanger AC028_18890 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AC028_18890 IPR005835 Nucleotidyl transferase domain AC028_18890 IPR029044 Nucleotide-diphospho-sugar transferases AC028_18895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_18895 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AC028_18895 IPR036291 NAD(P)-binding domain superfamily AC028_18900 IPR000715 Glycosyl transferase, family 4 AC028_18905 IPR041166 LapB, rubredoxin metal binding domain AC028_18905 IPR019734 Tetratricopeptide repeat AC028_18905 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_18905 IPR013026 Tetratricopeptide repeat-containing domain AC028_18905 IPR030865 Lipopolysaccharide assembly protein B AC028_18915 IPR005685 Integration host factor, beta subunit AC028_18915 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AC028_18915 IPR000119 Histone-like DNA-binding protein AC028_18915 IPR020816 Histone-like DNA-binding protein, conserved site AC028_18920 IPR003029 S1 domain AC028_18920 IPR022967 RNA-binding domain, S1 AC028_18920 IPR000110 Ribosomal protein S1 AC028_18920 IPR012340 Nucleic acid-binding, OB-fold AC028_18925 IPR003136 Cytidylate kinase AC028_18925 IPR011994 Cytidylate kinase domain AC028_18925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_18930 IPR035977 Ribosomal protein L36 superfamily AC028_18930 IPR000473 Ribosomal protein L36 AC028_18940 IPR017754 Agmatine deiminase AC028_18940 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type AC028_18945 IPR036526 Carbon-nitrogen hydrolase superfamily AC028_18945 IPR003010 Carbon-nitrogen hydrolase AC028_18945 IPR001110 Uncharacterised protein family UPF0012, conserved site AC028_18950 IPR016181 Acyl-CoA N-acyltransferase AC028_18950 IPR000182 GNAT domain AC028_18970 IPR035906 MetI-like superfamily AC028_18970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_18975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_18975 IPR035906 MetI-like superfamily AC028_18995 IPR028082 Periplasmic binding protein-like I AC028_18995 IPR000843 LacI-type HTH domain AC028_18995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_19005 IPR011008 Dimeric alpha-beta barrel AC028_19005 IPR005545 YCII-related AC028_19010 IPR003768 Segregation and condensation protein A AC028_19015 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_19015 IPR005234 Chromosome segregation/condensation protein ScpB AC028_19015 IPR036390 Winged helix DNA-binding domain superfamily AC028_19020 IPR036986 RNA-binding S4 domain superfamily AC028_19020 IPR002942 RNA-binding S4 domain AC028_19020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AC028_19020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AC028_19020 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_19020 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AC028_19020 IPR006145 Pseudouridine synthase, RsuA/RluA AC028_19035 IPR001110 Uncharacterised protein family UPF0012, conserved site AC028_19035 IPR036526 Carbon-nitrogen hydrolase superfamily AC028_19035 IPR003010 Carbon-nitrogen hydrolase AC028_19040 IPR004839 Aminotransferase, class I/classII AC028_19040 IPR015424 Pyridoxal phosphate-dependent transferase AC028_19040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_19040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_19045 IPR003593 AAA+ ATPase domain AC028_19045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19045 IPR017871 ABC transporter, conserved site AC028_19045 IPR003439 ABC transporter-like AC028_19045 IPR005895 ABC transporter, haem export, CcmA AC028_19050 IPR003544 Cytochrome c-type biogenesis protein CcmB AC028_19050 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AC028_19055 IPR003557 Cytochrome c-type biogenesis protein CcmC AC028_19055 IPR002541 Cytochrome c assembly protein AC028_19065 IPR004329 CcmE/CycJ protein AC028_19065 IPR036127 CcmE-like superfamily AC028_19070 IPR003568 Cytochrome c-type biogenesis protein CcmF AC028_19070 IPR003567 Cytochrome c-type biogenesis protein AC028_19070 IPR002541 Cytochrome c assembly protein AC028_19070 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AC028_19075 IPR013740 Redoxin AC028_19075 IPR036249 Thioredoxin-like superfamily AC028_19075 IPR017937 Thioredoxin, conserved site AC028_19075 IPR013766 Thioredoxin domain AC028_19075 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AC028_19080 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AC028_19080 IPR005616 CcmH/CycL/Ccl2/NrfF family AC028_19085 IPR019734 Tetratricopeptide repeat AC028_19085 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_19085 IPR013026 Tetratricopeptide repeat-containing domain AC028_19085 IPR017560 Cytochrome c-type biogenesis protein CcmI AC028_19090 IPR029058 Alpha/Beta hydrolase fold AC028_19090 IPR000073 Alpha/beta hydrolase fold-1 AC028_19090 IPR008220 Homoserine/serine acetyltransferase MetX-like AC028_19095 IPR012340 Nucleic acid-binding, OB-fold AC028_19095 IPR019844 Cold-shock (CSD) domain AC028_19095 IPR011129 Cold shock domain AC028_19095 IPR012156 Cold shock, CspA AC028_19095 IPR002059 Cold-shock protein, DNA-binding AC028_19100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19100 IPR017871 ABC transporter, conserved site AC028_19100 IPR003593 AAA+ ATPase domain AC028_19100 IPR011527 ABC transporter type 1, transmembrane domain AC028_19100 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC AC028_19100 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_19100 IPR003439 ABC transporter-like AC028_19105 IPR011527 ABC transporter type 1, transmembrane domain AC028_19105 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_19105 IPR003439 ABC transporter-like AC028_19105 IPR017871 ABC transporter, conserved site AC028_19105 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AC028_19105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19105 IPR039421 Type I protein exporter AC028_19105 IPR003593 AAA+ ATPase domain AC028_19110 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AC028_19115 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AC028_19145 IPR001387 Cro/C1-type helix-turn-helix domain AC028_19145 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_19150 IPR003593 AAA+ ATPase domain AC028_19150 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19150 IPR003959 ATPase, AAA-type, core AC028_19235 IPR011010 DNA breaking-rejoining enzyme, catalytic core AC028_19235 IPR013762 Integrase-like, catalytic domain superfamily AC028_19235 IPR002104 Integrase, catalytic domain AC028_19235 IPR010998 Integrase/recombinase, N-terminal AC028_19235 IPR035069 TTHA1013/TTHA0281-like AC028_19245 IPR008979 Galactose-binding-like domain superfamily AC028_19245 IPR005674 CocE/Serine esterase AC028_19245 IPR029058 Alpha/Beta hydrolase fold AC028_19245 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AC028_19245 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AC028_19255 IPR000965 GPR domain AC028_19255 IPR012134 Glutamate-5-semialdehyde dehydrogenase AC028_19255 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AC028_19255 IPR016161 Aldehyde/histidinol dehydrogenase AC028_19255 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_19255 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_19255 IPR015590 Aldehyde dehydrogenase domain AC028_19260 IPR011529 Glutamate 5-kinase AC028_19260 IPR041739 Glutamate-5-kinase domain AC028_19260 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AC028_19260 IPR036974 PUA domain superfamily AC028_19260 IPR015947 PUA-like superfamily AC028_19260 IPR002478 PUA domain AC028_19260 IPR019797 Glutamate 5-kinase, conserved site AC028_19260 IPR001048 Aspartate/glutamate/uridylate kinase AC028_19260 IPR036393 Acetylglutamate kinase-like superfamily AC028_19260 IPR001057 Glutamate/acetylglutamate kinase AC028_19270 IPR024083 Fumarase/histidase, N-terminal AC028_19270 IPR020557 Fumarate lyase, conserved site AC028_19270 IPR000362 Fumarate lyase family AC028_19270 IPR022761 Fumarate lyase, N-terminal AC028_19270 IPR008948 L-Aspartase-like AC028_19270 IPR009049 Argininosuccinate lyase AC028_19275 IPR000534 Semialdehyde dehydrogenase, NAD-binding AC028_19275 IPR036291 NAD(P)-binding domain superfamily AC028_19275 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AC028_19275 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AC028_19285 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type AC028_19285 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain AC028_19285 IPR001048 Aspartate/glutamate/uridylate kinase AC028_19285 IPR036393 Acetylglutamate kinase-like superfamily AC028_19285 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing AC028_19285 IPR016181 Acyl-CoA N-acyltransferase AC028_19285 IPR004662 Acetylglutamate kinase family AC028_19300 IPR018223 Argininosuccinate synthase, conserved site AC028_19300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_19300 IPR001518 Argininosuccinate synthase AC028_19300 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AC028_19300 IPR023434 Argininosuccinate synthase, type 1 subfamily AC028_19305 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AC028_19305 IPR006130 Aspartate/ornithine carbamoyltransferase AC028_19305 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AC028_19305 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AC028_19315 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_19315 IPR015803 Cysteine-tRNA ligase AC028_19315 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AC028_19315 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AC028_19315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_19315 IPR032678 tRNA synthetases class I, catalytic domain AC028_19320 IPR003808 Fe-S metabolism associated domain, SufE-like AC028_19320 IPR023939 Cysteine desulfuration protein SufE AC028_19330 IPR037187 DksA, N-terminal domain superfamily AC028_19330 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AC028_19330 IPR012784 RNA polymerase-binding transcription factor DksA AC028_19330 IPR000962 Zinc finger, DksA/TraR C4-type AC028_19340 IPR002696 Putative membrane protein insertion efficiency factor AC028_19345 IPR032466 Metal-dependent hydrolase AC028_19345 IPR006680 Amidohydrolase-related AC028_19345 IPR004722 Dihydroorotase AC028_19345 IPR002195 Dihydroorotase, conserved site AC028_19345 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_19350 IPR003646 SH3-like domain, bacterial-type AC028_19350 IPR011055 Duplicated hybrid motif AC028_19350 IPR016047 Peptidase M23 AC028_19360 IPR013785 Aldolase-type TIM barrel AC028_19360 IPR010628 Ethanolamine ammonia lyase large subunit AC028_19365 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal AC028_19365 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal AC028_19365 IPR009246 Ethanolamine ammonia-lyase light chain AC028_19375 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_19375 IPR001279 Metallo-beta-lactamase AC028_19395 IPR000743 Glycoside hydrolase, family 28 AC028_19395 IPR012334 Pectin lyase fold AC028_19395 IPR011050 Pectin lyase fold/virulence factor AC028_19405 IPR037512 Phosphoglycolate phosphatase, prokaryotic AC028_19405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AC028_19405 IPR023214 HAD superfamily AC028_19405 IPR041492 Haloacid dehalogenase-like hydrolase AC028_19405 IPR036412 HAD-like superfamily AC028_19405 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AC028_19405 IPR006439 HAD hydrolase, subfamily IA AC028_19415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_19415 IPR010233 Ubiquinone biosynthesis O-methyltransferase AC028_19420 IPR032466 Metal-dependent hydrolase AC028_19420 IPR006680 Amidohydrolase-related AC028_19420 IPR011059 Metal-dependent hydrolase, composite domain superfamily AC028_19420 IPR023512 Deaminase MtaD/DadD AC028_19430 IPR020599 Translation elongation factor P/YeiP AC028_19430 IPR013185 Translation elongation factor, KOW-like AC028_19430 IPR001059 Translation elongation factor P/YeiP, central AC028_19430 IPR014722 Ribosomal protein L2, domain 2 AC028_19430 IPR013852 Translation elongation factor P/YeiP, conserved site AC028_19430 IPR012340 Nucleic acid-binding, OB-fold AC028_19430 IPR015365 Elongation factor P, C-terminal AC028_19430 IPR011768 Translation elongation factor P AC028_19430 IPR008991 Translation protein SH3-like domain superfamily AC028_19435 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AC028_19435 IPR007197 Radical SAM AC028_19435 IPR013785 Aldolase-type TIM barrel AC028_19435 IPR022462 Lysine-2,3-aminomutase-like AC028_19440 IPR000014 PAS domain AC028_19440 IPR035965 PAS domain superfamily AC028_19440 IPR029787 Nucleotide cyclase AC028_19440 IPR000160 GGDEF domain AC028_19440 IPR005330 MHYT domain AC028_19440 IPR035919 EAL domain superfamily AC028_19440 IPR001633 EAL domain AC028_19450 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_19450 IPR029028 Alpha/beta knot methyltransferases AC028_19450 IPR004384 RNA methyltransferase TrmJ/LasT AC028_19450 IPR001537 tRNA/rRNA methyltransferase, SpoU type AC028_19455 IPR020550 Inositol monophosphatase, conserved site AC028_19455 IPR022337 Inositol monophosphatase, SuhB AC028_19455 IPR000760 Inositol monophosphatase-like AC028_19455 IPR033942 Inositol monophosphatase AC028_19455 IPR020583 Inositol monophosphatase, metal-binding site AC028_19460 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AC028_19460 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AC028_19460 IPR019831 Manganese/iron superoxide dismutase, N-terminal AC028_19460 IPR019832 Manganese/iron superoxide dismutase, C-terminal AC028_19460 IPR019833 Manganese/iron superoxide dismutase, binding site AC028_19460 IPR001189 Manganese/iron superoxide dismutase AC028_19465 IPR000026 Guanine-specific ribonuclease N1/T1/U2 AC028_19465 IPR016191 Ribonuclease/ribotoxin AC028_19480 IPR014014 RNA helicase, DEAD-box type, Q motif AC028_19480 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AC028_19480 IPR011545 DEAD/DEAH box helicase domain AC028_19480 IPR028619 ATP-dependent RNA helicase DbpA AC028_19480 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_19480 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AC028_19480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19480 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_19480 IPR001650 Helicase, C-terminal AC028_19485 IPR029057 Phosphoribosyltransferase-like AC028_19485 IPR000836 Phosphoribosyltransferase domain AC028_19485 IPR005764 Adenine phosphoribosyl transferase AC028_19490 IPR003846 Protein adenylyltransferase SelO AC028_19495 IPR013094 Alpha/beta hydrolase fold-3 AC028_19495 IPR029058 Alpha/Beta hydrolase fold AC028_19500 IPR004046 Glutathione S-transferase, C-terminal AC028_19500 IPR004045 Glutathione S-transferase, N-terminal AC028_19500 IPR034330 Glutathione S-transferases, class Zeta , C-terminal AC028_19500 IPR034333 Glutathione S-transferases, class Zeta , N-terminal AC028_19500 IPR036249 Thioredoxin-like superfamily AC028_19500 IPR040079 Glutathione Transferase family AC028_19500 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_19500 IPR010987 Glutathione S-transferase, C-terminal-like AC028_19500 IPR005955 Glutathione S-transferases, class Zeta AC028_19505 IPR012156 Cold shock, CspA AC028_19505 IPR011129 Cold shock domain AC028_19505 IPR019844 Cold-shock (CSD) domain AC028_19505 IPR012340 Nucleic acid-binding, OB-fold AC028_19505 IPR002059 Cold-shock protein, DNA-binding AC028_19510 IPR011335 Restriction endonuclease type II-like AC028_19510 IPR009822 YaeQ AC028_19510 IPR038590 YaeQ superfamily AC028_19515 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like AC028_19515 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_19515 IPR023166 HI0933-like insert domain superfamily AC028_19520 IPR001633 EAL domain AC028_19520 IPR035919 EAL domain superfamily AC028_19520 IPR000160 GGDEF domain AC028_19520 IPR029787 Nucleotide cyclase AC028_19520 IPR001789 Signal transduction response regulator, receiver domain AC028_19520 IPR011006 CheY-like superfamily AC028_19525 IPR022919 Peptidase M48, protease HtpX, putative AC028_19525 IPR001915 Peptidase M48 AC028_19530 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AC028_19530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_19530 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AC028_19530 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AC028_19535 IPR011283 Acetoacetyl-CoA reductase AC028_19535 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_19535 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_19535 IPR036291 NAD(P)-binding domain superfamily AC028_19540 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AC028_19540 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AC028_19540 IPR007897 PHB accumulation regulatory AC028_19560 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain AC028_19560 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_19560 IPR021731 AMIN domain AC028_19565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19565 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AC028_19570 IPR036652 YjeF N-terminal domain superfamily AC028_19570 IPR004443 YjeF N-terminal domain AC028_19570 IPR029056 Ribokinase-like AC028_19570 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AC028_19570 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AC028_19570 IPR017953 Carbohydrate kinase, predicted, conserved site AC028_19575 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_19575 IPR004453 Epoxyqueuosine reductase QueG AC028_19575 IPR013542 Domain of unknown function DUF1730 AC028_19575 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_19580 IPR020579 Exonuclease VII, large subunit, C-terminal AC028_19580 IPR003753 Exonuclease VII, large subunit AC028_19580 IPR025824 OB-fold nucleic acid binding domain AC028_19590 IPR042095 Sulfatase-modifying factor enzyme superfamily AC028_19590 IPR016187 C-type lectin fold AC028_19590 IPR005532 Sulfatase-modifying factor enzyme AC028_19595 IPR006292 Ribonuclease D AC028_19595 IPR012337 Ribonuclease H-like superfamily AC028_19595 IPR036397 Ribonuclease H superfamily AC028_19595 IPR002562 3'-5' exonuclease domain AC028_19595 IPR010997 HRDC-like superfamily AC028_19595 IPR002121 HRDC domain AC028_19600 IPR012340 Nucleic acid-binding, OB-fold AC028_19600 IPR014145 DNA ligase D, polymerase domain AC028_19600 IPR012310 DNA ligase, ATP-dependent, central AC028_19600 IPR014143 DNA ligase D AC028_19600 IPR012309 DNA ligase, ATP-dependent, C-terminal AC028_19600 IPR014144 DNA ligase D, 3'-phosphoesterase domain AC028_19600 IPR033651 LigD polymerase domain, PaeLigD-type AC028_19600 IPR014146 DNA ligase D, ligase domain AC028_19630 IPR036061 CheW-like domain superfamily AC028_19630 IPR002545 CheW-like domain AC028_19630 IPR039315 Chemotaxis protein CheW AC028_19635 IPR029151 Periplasmic sensor-like domain superfamily AC028_19635 IPR033479 Double Cache domain 1 AC028_19635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_19635 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_19635 IPR003660 HAMP domain AC028_19640 IPR011034 Formyl transferase-like, C-terminal domain superfamily AC028_19640 IPR003180 Methylpurine-DNA glycosylase AC028_19640 IPR036995 Methylpurine-DNA glycosylase superfamily AC028_19645 IPR001650 Helicase, C-terminal AC028_19645 IPR003593 AAA+ ATPase domain AC028_19645 IPR013701 DEAD/H associated AC028_19645 IPR011545 DEAD/DEAH box helicase domain AC028_19645 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_19645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19660 IPR007481 Stringent starvation protein B AC028_19660 IPR036760 SspB-like superfamily AC028_19665 IPR004045 Glutathione S-transferase, N-terminal AC028_19665 IPR010987 Glutathione S-transferase, C-terminal-like AC028_19665 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AC028_19665 IPR040079 Glutathione Transferase family AC028_19665 IPR004046 Glutathione S-transferase, C-terminal AC028_19665 IPR034341 Stringent starvation protein A, N-terminal AC028_19665 IPR036249 Thioredoxin-like superfamily AC028_19670 IPR002326 Cytochrome c1 AC028_19670 IPR036909 Cytochrome c-like domain superfamily AC028_19670 IPR009056 Cytochrome c-like domain AC028_19675 IPR036150 Cytochrome b/b6, C-terminal domain superfamily AC028_19675 IPR005797 Cytochrome b/b6, N-terminal AC028_19675 IPR027387 Cytochrome b/b6-like domain superfamily AC028_19675 IPR005798 Cytochrome b/b6, C-terminal AC028_19675 IPR016174 Di-haem cytochrome, transmembrane AC028_19675 IPR030689 Cytochrome b AC028_19680 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AC028_19680 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AC028_19680 IPR014349 Rieske iron-sulphur protein AC028_19680 IPR005805 Rieske iron-sulphur protein, C-terminal AC028_19680 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal AC028_19680 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit AC028_19685 IPR008258 Transglycosylase SLT domain 1 AC028_19685 IPR000189 Prokaryotic transglycosylase, active site AC028_19685 IPR023346 Lysozyme-like domain superfamily AC028_19700 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AC028_19700 IPR038135 Methylthiotransferase, N-terminal domain superfamily AC028_19700 IPR020612 Methylthiotransferase, conserved site AC028_19700 IPR013848 Methylthiotransferase, N-terminal AC028_19700 IPR007197 Radical SAM AC028_19700 IPR005839 Methylthiotransferase AC028_19700 IPR006638 Elp3/MiaB/NifB AC028_19700 IPR002792 TRAM domain AC028_19700 IPR023404 Radical SAM, alpha/beta horseshoe AC028_19705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19705 IPR003714 PhoH-like protein AC028_19715 IPR023091 Metalloprotease catalytic domain superfamily, predicted AC028_19715 IPR020549 Endoribonuclease YbeY, conserved site AC028_19715 IPR002036 Endoribonuclease YbeY AC028_19725 IPR000644 CBS domain AC028_19725 IPR005170 Transporter-associated domain AC028_19725 IPR036318 FAD-binding, type PCMH-like superfamily AC028_19725 IPR016169 FAD-binding, type PCMH, subdomain 2 AC028_19740 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_19740 IPR016161 Aldehyde/histidinol dehydrogenase AC028_19740 IPR015590 Aldehyde dehydrogenase domain AC028_19740 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_19750 IPR035906 MetI-like superfamily AC028_19750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_19755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AC028_19755 IPR035906 MetI-like superfamily AC028_19760 IPR003593 AAA+ ATPase domain AC028_19760 IPR008995 Molybdate/tungstate binding, C-terminal AC028_19760 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_19760 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AC028_19760 IPR013611 Transport-associated OB, type 2 AC028_19760 IPR017871 ABC transporter, conserved site AC028_19760 IPR003439 ABC transporter-like AC028_19765 IPR003423 Outer membrane efflux protein AC028_19765 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AC028_19770 IPR020846 Major facilitator superfamily domain AC028_19770 IPR036259 MFS transporter superfamily AC028_19770 IPR004638 Drug resistance transporter EmrB-like AC028_19770 IPR011701 Major facilitator superfamily AC028_19775 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AC028_19780 IPR006059 Bacterial extracellular solute-binding protein AC028_19780 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AC028_19785 IPR015424 Pyridoxal phosphate-dependent transferase AC028_19785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AC028_19785 IPR005814 Aminotransferase class-III AC028_19785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AC028_19790 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AC028_19790 IPR008146 Glutamine synthetase, catalytic domain AC028_19790 IPR036651 Glutamine synthetase, N-terminal domain superfamily AC028_19795 IPR017926 Glutamine amidotransferase AC028_19795 IPR011697 Peptidase C26 AC028_19795 IPR029062 Class I glutamine amidotransferase-like AC028_19800 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AC028_19800 IPR036651 Glutamine synthetase, N-terminal domain superfamily AC028_19800 IPR027303 Glutamine synthetase, glycine-rich site AC028_19800 IPR008146 Glutamine synthetase, catalytic domain AC028_19805 IPR006076 FAD dependent oxidoreductase AC028_19805 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_19810 IPR000160 GGDEF domain AC028_19810 IPR001789 Signal transduction response regulator, receiver domain AC028_19810 IPR029787 Nucleotide cyclase AC028_19810 IPR011006 CheY-like superfamily AC028_19815 IPR035938 Hemerythrin-like superfamily AC028_19815 IPR012827 Haemerythrin, metal-binding domain AC028_19815 IPR016131 Haemerythrin, iron-binding site AC028_19815 IPR012312 Haemerythrin-like AC028_19815 IPR023504 Bacteriohemerythrin-like protein AC028_19820 IPR011701 Major facilitator superfamily AC028_19820 IPR020846 Major facilitator superfamily domain AC028_19820 IPR036259 MFS transporter superfamily AC028_19820 IPR004736 MFS transporter, metabolite:H symporter AC028_19820 IPR005829 Sugar transporter, conserved site AC028_19820 IPR005828 Major facilitator, sugar transporter-like AC028_19835 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain AC028_19835 IPR009010 Aspartate decarboxylase-like domain superfamily AC028_19835 IPR010046 Oxidoreductase alpha (molybdopterin) subunit AC028_19835 IPR006656 Molybdopterin oxidoreductase AC028_19835 IPR037951 YdeP-like, MopB domain AC028_19840 IPR003786 Sulfur carrier protein FdhD AC028_19840 IPR016193 Cytidine deaminase-like AC028_19845 IPR004741 Oxalate/formate antiporter family transporter AC028_19845 IPR020846 Major facilitator superfamily domain AC028_19845 IPR026355 Oxalate/formate antiporter AC028_19845 IPR036259 MFS transporter superfamily AC028_19845 IPR011701 Major facilitator superfamily AC028_19860 IPR007383 Protein of unknown function DUF445 AC028_19865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_19865 IPR011006 CheY-like superfamily AC028_19865 IPR005467 Histidine kinase domain AC028_19865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_19865 IPR003660 HAMP domain AC028_19865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_19865 IPR003594 Histidine kinase/HSP90-like ATPase AC028_19865 IPR019247 Histidine kinase BarA, N-terminal AC028_19865 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_19865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_19865 IPR036641 HPT domain superfamily AC028_19865 IPR001789 Signal transduction response regulator, receiver domain AC028_19870 IPR001789 Signal transduction response regulator, receiver domain AC028_19870 IPR037522 HD-GYP domain AC028_19870 IPR003607 HD/PDEase domain AC028_19870 IPR011006 CheY-like superfamily AC028_19875 IPR011701 Major facilitator superfamily AC028_19875 IPR036259 MFS transporter superfamily AC028_19875 IPR020846 Major facilitator superfamily domain AC028_19875 IPR004638 Drug resistance transporter EmrB-like AC028_19905 IPR036291 NAD(P)-binding domain superfamily AC028_19905 IPR028971 NAD-glutamate dehydrogenase AC028_19905 IPR007780 NAD-glutamate dehydrogenase, bacteria AC028_19915 IPR006143 RND efflux pump, membrane fusion protein AC028_19915 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_19920 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AC028_19920 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_19920 IPR001036 Acriflavin resistance protein AC028_19925 IPR028082 Periplasmic binding protein-like I AC028_19925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_19925 IPR000843 LacI-type HTH domain AC028_19925 IPR012310 DNA ligase, ATP-dependent, central AC028_19930 IPR000121 PEP-utilising enzyme, C-terminal AC028_19930 IPR006318 Phosphotransferase system, enzyme I-like AC028_19930 IPR040442 Pyruvate kinase-like domain superfamily AC028_19930 IPR016152 Phosphotransferase/anion transporter AC028_19930 IPR018274 PEP-utilising enzyme, active site AC028_19930 IPR008279 PEP-utilising enzyme, mobile domain AC028_19930 IPR035895 HPr-like superfamily AC028_19930 IPR036637 Phosphohistidine domain superfamily AC028_19930 IPR008731 Phosphotransferase system, enzyme I N-terminal AC028_19930 IPR002178 PTS EIIA type-2 domain AC028_19930 IPR000032 Phosphocarrier protein HPr-like AC028_19930 IPR036618 PtsI, HPr-binding domain superfamily AC028_19930 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AC028_19930 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AC028_19930 IPR023151 PEP-utilising enzyme, conserved site AC028_19930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AC028_19935 IPR017583 Tagatose/fructose phosphokinase AC028_19935 IPR022463 Fructose 1-phosphate kinase AC028_19935 IPR011611 Carbohydrate kinase PfkB AC028_19935 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AC028_19935 IPR029056 Ribokinase-like AC028_19940 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AC028_19940 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AC028_19940 IPR013011 Phosphotransferase system, EIIB component, type 2 AC028_19940 IPR036095 PTS system IIB component-like superfamily AC028_19940 IPR006327 Phosphotransferase system, fructose IIC component AC028_19940 IPR013014 Phosphotransferase system, EIIC component, type 2 AC028_19945 IPR012337 Ribonuclease H-like superfamily AC028_19945 IPR036397 Ribonuclease H superfamily AC028_19945 IPR001584 Integrase, catalytic core AC028_19945 IPR025948 HTH-like domain AC028_19950 IPR009057 Homeobox-like domain superfamily AC028_19950 IPR002514 Transposase IS3/IS911family AC028_19965 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AC028_19965 IPR005665 Protein-export membrane protein SecF, bacterial AC028_19965 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_19965 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AC028_19970 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AC028_19970 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_19970 IPR027398 SecD export protein N-terminal TM domain AC028_19970 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AC028_19970 IPR005791 Protein translocase subunit SecD AC028_19975 IPR003849 Preprotein translocase YajC AC028_19980 IPR002616 tRNA-guanine(15) transglycosylase-like AC028_19980 IPR004803 tRNA-guanine transglycosylase AC028_19980 IPR036511 Queuine tRNA-ribosyltransferase-like AC028_19985 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AC028_19985 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AC028_19985 IPR042118 QueA, domain 1 AC028_19985 IPR042119 QueA, domain 2 AC028_20025 IPR005765 Uracil phosphoribosyl transferase AC028_20025 IPR000836 Phosphoribosyltransferase domain AC028_20025 IPR029057 Phosphoribosyltransferase-like AC028_20025 IPR034332 Uracil phosphoribosyltransferase, bacterial-type AC028_20030 IPR001584 Integrase, catalytic core AC028_20030 IPR012337 Ribonuclease H-like superfamily AC028_20030 IPR025948 HTH-like domain AC028_20030 IPR036397 Ribonuclease H superfamily AC028_20035 IPR009057 Homeobox-like domain superfamily AC028_20035 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_20035 IPR002514 Transposase IS3/IS911family AC028_20040 IPR004197 Cellulase, Ig-like domain AC028_20040 IPR012341 Six-hairpin glycosidase-like superfamily AC028_20040 IPR001701 Glycoside hydrolase family 9 AC028_20040 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites AC028_20040 IPR013783 Immunoglobulin-like fold AC028_20040 IPR014756 Immunoglobulin E-set AC028_20040 IPR008928 Six-hairpin glycosidase superfamily AC028_20040 IPR018221 Glycoside hydrolase family 9, His active site AC028_20050 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_20050 IPR000101 Gamma-glutamyltranspeptidase AC028_20055 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_20055 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_20070 IPR004821 Cytidyltransferase-like domain AC028_20070 IPR001980 Phosphopantetheine adenylyltransferase AC028_20070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_20075 IPR004398 RNA methyltransferase, RsmD AC028_20075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_20075 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_20080 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_20080 IPR020575 Heat shock protein Hsp90, N-terminal AC028_20080 IPR037196 HSP90, C-terminal domain AC028_20080 IPR019805 Heat shock protein Hsp90, conserved site AC028_20080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_20080 IPR003594 Histidine kinase/HSP90-like ATPase AC028_20080 IPR001404 Heat shock protein Hsp90 family AC028_20095 IPR009057 Homeobox-like domain superfamily AC028_20095 IPR002514 Transposase IS3/IS911family AC028_20095 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_20100 IPR036397 Ribonuclease H superfamily AC028_20100 IPR012337 Ribonuclease H-like superfamily AC028_20100 IPR001584 Integrase, catalytic core AC028_20100 IPR025948 HTH-like domain AC028_20110 IPR002559 Transposase, IS4-like AC028_20110 IPR008490 Transposase InsH, N-terminal AC028_20125 IPR010916 TonB box, conserved site AC028_20125 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_20125 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_20125 IPR010917 TonB-dependent receptor, conserved site AC028_20125 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_20125 IPR039426 Vitamin B12 transporter BtuB-like AC028_20125 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_20125 IPR012910 TonB-dependent receptor, plug domain AC028_20135 IPR006710 Glycoside hydrolase, family 43 AC028_20135 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AC028_20140 IPR006311 Twin-arginine translocation pathway, signal sequence AC028_20140 IPR013783 Immunoglobulin-like fold AC028_20140 IPR008979 Galactose-binding-like domain superfamily AC028_20140 IPR011081 Bacterial Ig-related AC028_20140 IPR012341 Six-hairpin glycosidase-like superfamily AC028_20140 IPR008928 Six-hairpin glycosidase superfamily AC028_20145 IPR039426 Vitamin B12 transporter BtuB-like AC028_20145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_20145 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_20145 IPR010917 TonB-dependent receptor, conserved site AC028_20145 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_20145 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_20145 IPR012910 TonB-dependent receptor, plug domain AC028_20145 IPR010916 TonB box, conserved site AC028_20155 IPR036852 Peptidase S8/S53 domain superfamily AC028_20155 IPR015366 Peptidase S53, activation domain AC028_20155 IPR030400 Sedolisin domain AC028_20155 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_20155 IPR000209 Peptidase S8/S53 domain AC028_20180 IPR002293 Amino acid/polyamine transporter I AC028_20195 IPR001714 Peptidase M24, methionine aminopeptidase AC028_20195 IPR036005 Creatinase/aminopeptidase-like AC028_20195 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AC028_20195 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AC028_20195 IPR000994 Peptidase M24 AC028_20195 IPR000587 Creatinase, N-terminal AC028_20200 IPR015590 Aldehyde dehydrogenase domain AC028_20200 IPR016162 Aldehyde dehydrogenase, N-terminal AC028_20200 IPR016163 Aldehyde dehydrogenase, C-terminal AC028_20200 IPR016161 Aldehyde/histidinol dehydrogenase AC028_20205 IPR020624 Schiff base-forming aldolase, conserved site AC028_20205 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AC028_20205 IPR020625 Schiff base-forming aldolase, active site AC028_20205 IPR013785 Aldolase-type TIM barrel AC028_20205 IPR002220 DapA-like AC028_20210 IPR007419 BFD-like [2Fe-2S]-binding domain AC028_20210 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B AC028_20210 IPR023753 FAD/NAD(P)-binding domain AC028_20210 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AC028_20210 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_20220 IPR012727 Glycine oxidase ThiO AC028_20220 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_20220 IPR006076 FAD dependent oxidoreductase AC028_20225 IPR008794 Proline racemase family AC028_20235 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AC028_20235 IPR003593 AAA+ ATPase domain AC028_20235 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20235 IPR013822 Signal recognition particle SRP54, helical bundle AC028_20235 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AC028_20235 IPR004390 Signal-recognition particle receptor FtsY AC028_20235 IPR036225 SRP/SRP receptor, N-terminal AC028_20240 IPR003265 HhH-GPD domain AC028_20240 IPR004035 Endonuclease III, iron-sulphur binding site AC028_20240 IPR029119 MutY, C-terminal AC028_20240 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AC028_20240 IPR015797 NUDIX hydrolase-like domain superfamily AC028_20240 IPR000445 Helix-hairpin-helix motif AC028_20240 IPR004036 Endonuclease III-like, conserved site-2 AC028_20240 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AC028_20240 IPR005760 A/G-specific adenine glycosylase MutY AC028_20240 IPR011257 DNA glycosylase AC028_20245 IPR036766 Fe(II) trafficking protein YggX superfamily AC028_20245 IPR007457 Fe(II) trafficking protein YggX AC028_20250 IPR011006 CheY-like superfamily AC028_20250 IPR003594 Histidine kinase/HSP90-like ATPase AC028_20250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_20250 IPR005467 Histidine kinase domain AC028_20250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_20250 IPR001610 PAC motif AC028_20250 IPR000014 PAS domain AC028_20250 IPR000700 PAS-associated, C-terminal AC028_20250 IPR035965 PAS domain superfamily AC028_20250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_20250 IPR001789 Signal transduction response regulator, receiver domain AC028_20250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_20265 IPR000305 GIY-YIG endonuclease AC028_20265 IPR035901 GIY-YIG endonuclease superfamily AC028_20280 IPR012674 Calycin AC028_20280 IPR022271 Lipocalin, ApoD type AC028_20280 IPR002446 Lipocalin, bacterial AC028_20280 IPR022272 Lipocalin family conserved site AC028_20280 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AC028_20290 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AC028_20290 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AC028_20290 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AC028_20290 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AC028_20290 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AC028_20290 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AC028_20290 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AC028_20300 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_20300 IPR029061 Thiamin diphosphate-binding fold AC028_20300 IPR005477 Deoxyxylulose-5-phosphate synthase AC028_20300 IPR020826 Transketolase binding site AC028_20300 IPR033248 Transketolase, C-terminal domain AC028_20300 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AC028_20300 IPR005474 Transketolase, N-terminal AC028_20320 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase AC028_20320 IPR036291 NAD(P)-binding domain superfamily AC028_20325 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AC028_20325 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AC028_20325 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AC028_20325 IPR001279 Metallo-beta-lactamase AC028_20325 IPR017782 Hydroxyacylglutathione hydrolase AC028_20330 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC028_20330 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AC028_20330 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AC028_20330 IPR016039 Thiolase-like AC028_20345 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase AC028_20345 IPR004629 Glycosyl transferase WecB/TagA/CpsF AC028_20360 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AC028_20370 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AC028_20370 IPR001296 Glycosyl transferase, family 1 AC028_20390 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AC028_20390 IPR003362 Bacterial sugar transferase AC028_20390 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AC028_20410 IPR009061 Putative DNA-binding domain superfamily AC028_20410 IPR000551 MerR-type HTH domain AC028_20415 IPR005684 Integration host factor, alpha subunit AC028_20415 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AC028_20415 IPR020816 Histone-like DNA-binding protein, conserved site AC028_20415 IPR000119 Histone-like DNA-binding protein AC028_20420 IPR005147 tRNA synthetase, B5-domain AC028_20420 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AC028_20420 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AC028_20420 IPR012340 Nucleic acid-binding, OB-fold AC028_20420 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AC028_20420 IPR005121 Ferrodoxin-fold anticodon-binding domain AC028_20420 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AC028_20420 IPR009061 Putative DNA-binding domain superfamily AC028_20420 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AC028_20420 IPR005146 B3/B4 tRNA-binding domain AC028_20420 IPR002547 tRNA-binding domain AC028_20425 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AC028_20425 IPR002319 Phenylalanyl-tRNA synthetase AC028_20425 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AC028_20425 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AC028_20425 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_20425 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AC028_20430 IPR005813 Ribosomal protein L20 AC028_20430 IPR035566 Ribosomal protein L20, C-terminal AC028_20435 IPR021137 Ribosomal protein L35 AC028_20435 IPR037229 Ribosomal protein L35 superfamily AC028_20435 IPR001706 Ribosomal protein L35, non-mitochondrial AC028_20435 IPR018265 Ribosomal protein L35, conserved site AC028_20440 IPR019814 Translation initiation factor 3, N-terminal AC028_20440 IPR019813 Translation initiation factor 3, conserved site AC028_20440 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AC028_20440 IPR001288 Translation initiation factor 3 AC028_20440 IPR019815 Translation initiation factor 3, C-terminal AC028_20440 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AC028_20445 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AC028_20445 IPR006195 Aminoacyl-tRNA synthetase, class II AC028_20445 IPR004154 Anticodon-binding AC028_20445 IPR036621 Anticodon-binding domain superfamily AC028_20445 IPR004095 TGS AC028_20445 IPR012676 TGS-like AC028_20445 IPR002320 Threonine-tRNA ligase, class IIa AC028_20445 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AC028_20445 IPR033728 Threonine-tRNA ligase catalytic core domain AC028_20445 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AC028_20445 IPR012675 Beta-grasp domain superfamily AC028_20450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AC028_20450 IPR000843 LacI-type HTH domain AC028_20450 IPR028082 Periplasmic binding protein-like I AC028_20480 IPR002514 Transposase IS3/IS911family AC028_20480 IPR009057 Homeobox-like domain superfamily AC028_20480 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_20485 IPR012337 Ribonuclease H-like superfamily AC028_20485 IPR036397 Ribonuclease H superfamily AC028_20485 IPR025948 HTH-like domain AC028_20485 IPR001584 Integrase, catalytic core AC028_20490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20490 IPR003688 Type IV secretion system protein TraG/VirD4 AC028_20505 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_20505 IPR001943 UVR domain AC028_20505 IPR001650 Helicase, C-terminal AC028_20505 IPR004807 UvrABC system, subunit B AC028_20505 IPR024759 UvrB, YAD/RRR-motif-containing domain AC028_20505 IPR036876 UVR domain superfamily AC028_20505 IPR041471 UvrB, interaction domain AC028_20505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20505 IPR006935 Helicase/UvrB, N-terminal AC028_20510 IPR000983 Bacterial general secretion pathway protein G-type pilin AC028_20510 IPR012902 Prokaryotic N-terminal methylation site AC028_20510 IPR001082 Fimbrial protein pilin AC028_20515 IPR002559 Transposase, IS4-like AC028_20515 IPR008490 Transposase InsH, N-terminal AC028_20520 IPR012337 Ribonuclease H-like superfamily AC028_20520 IPR025948 HTH-like domain AC028_20520 IPR036397 Ribonuclease H superfamily AC028_20520 IPR001584 Integrase, catalytic core AC028_20525 IPR009057 Homeobox-like domain superfamily AC028_20525 IPR002514 Transposase IS3/IS911family AC028_20540 IPR008707 PilC beta-propeller domain AC028_20540 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_20560 IPR012902 Prokaryotic N-terminal methylation site AC028_20565 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily AC028_20565 IPR021826 Domain of unknown function DUF3412 AC028_20565 IPR031100 LOG family AC028_20565 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal AC028_20570 IPR039426 Vitamin B12 transporter BtuB-like AC028_20570 IPR013784 Carbohydrate-binding-like fold AC028_20570 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_20575 IPR002771 Multiple antibiotic resistance (MarC)-related AC028_20585 IPR036249 Thioredoxin-like superfamily AC028_20585 IPR004480 Monothiol glutaredoxin-related AC028_20585 IPR002109 Glutaredoxin AC028_20585 IPR033658 Glutaredoxin, PICOT-like AC028_20585 IPR014434 Monothiol glutaredoxin AC028_20590 IPR019832 Manganese/iron superoxide dismutase, C-terminal AC028_20590 IPR019833 Manganese/iron superoxide dismutase, binding site AC028_20590 IPR001189 Manganese/iron superoxide dismutase AC028_20590 IPR019831 Manganese/iron superoxide dismutase, N-terminal AC028_20590 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AC028_20590 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AC028_20595 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AC028_20595 IPR016185 Pre-ATP-grasp domain superfamily AC028_20595 IPR013815 ATP-grasp fold, subdomain 1 AC028_20595 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AC028_20595 IPR011761 ATP-grasp fold AC028_20595 IPR011054 Rudiment single hybrid motif AC028_20595 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AC028_20600 IPR024694 PurE, prokaryotic type AC028_20600 IPR000031 PurE domain AC028_20600 IPR035893 PurE domain superfamily AC028_20600 IPR033747 Class I PurE AC028_20610 IPR013785 Aldolase-type TIM barrel AC028_20610 IPR004393 Nicotinate-nucleotide pyrophosphorylase AC028_20610 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AC028_20610 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AC028_20610 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AC028_20610 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AC028_20610 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AC028_20620 IPR012340 Nucleic acid-binding, OB-fold AC028_20620 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AC028_20620 IPR012162 Polyribonucleotide nucleotidyltransferase AC028_20620 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_20620 IPR001247 Exoribonuclease, phosphorolytic domain 1 AC028_20620 IPR015847 Exoribonuclease, phosphorolytic domain 2 AC028_20620 IPR004087 K Homology domain AC028_20620 IPR036345 Exoribonuclease, PH domain 2 superfamily AC028_20620 IPR004088 K Homology domain, type 1 AC028_20620 IPR036612 K Homology domain, type 1 superfamily AC028_20620 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AC028_20620 IPR022967 RNA-binding domain, S1 AC028_20620 IPR003029 S1 domain AC028_20620 IPR027408 PNPase/RNase PH domain superfamily AC028_20625 IPR005290 Ribosomal protein S15, bacterial-type AC028_20625 IPR009068 S15/NS1, RNA-binding AC028_20625 IPR000589 Ribosomal protein S15 AC028_20630 IPR002501 Pseudouridine synthase II, N-terminal AC028_20630 IPR015947 PUA-like superfamily AC028_20630 IPR014780 tRNA pseudouridine synthase II, TruB AC028_20630 IPR032819 tRNA pseudouridylate synthase B, C-terminal AC028_20630 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AC028_20630 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_20635 IPR020053 Ribosome-binding factor A, conserved site AC028_20635 IPR023799 Ribosome-binding factor A domain superfamily AC028_20635 IPR000238 Ribosome-binding factor A AC028_20635 IPR015946 K homology domain-like, alpha/beta AC028_20640 IPR000178 Translation initiation factor aIF-2, bacterial-like AC028_20640 IPR006847 Translation initiation factor IF-2, N-terminal AC028_20640 IPR013575 Initiation factor 2 associated domain, bacterial AC028_20640 IPR000795 Transcription factor, GTP-binding domain AC028_20640 IPR005225 Small GTP-binding protein domain AC028_20640 IPR023115 Translation initiation factor IF- 2, domain 3 AC028_20640 IPR009061 Putative DNA-binding domain superfamily AC028_20640 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AC028_20640 IPR009000 Translation protein, beta-barrel domain superfamily AC028_20640 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20640 IPR015760 Translation initiation factor IF- 2 AC028_20645 IPR010213 Transcription termination factor NusA AC028_20645 IPR012340 Nucleic acid-binding, OB-fold AC028_20645 IPR015946 K homology domain-like, alpha/beta AC028_20645 IPR025249 KH domain, NusA-like AC028_20645 IPR010214 Transcription termination factor NusA, C-terminal duplication AC028_20645 IPR036555 NusA, N-terminal domain superfamily AC028_20645 IPR022967 RNA-binding domain, S1 AC028_20645 IPR003029 S1 domain AC028_20645 IPR013735 Transcription factor NusA, N-terminal AC028_20645 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AC028_20645 IPR030842 Transcription termination/antitermination protein NusA, bacterial AC028_20645 IPR009019 K homology domain superfamily, prokaryotic type AC028_20650 IPR003728 Ribosome maturation factor RimP AC028_20650 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AC028_20650 IPR028998 Ribosome maturation factor RimP, C-terminal AC028_20650 IPR035956 RimP, N-terminal domain superfamily AC028_20650 IPR028989 Ribosome maturation factor RimP, N-terminal AC028_20660 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AC028_20660 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_20665 IPR003918 NADH:ubiquinone oxidoreductase AC028_20665 IPR010227 NADH-quinone oxidoreductase, chain M/4 AC028_20665 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_20665 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal AC028_20670 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AC028_20670 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AC028_20670 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AC028_20670 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AC028_20675 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AC028_20675 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AC028_20680 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ AC028_20680 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AC028_20685 IPR010226 NADH-quinone oxidoreductase, chain I AC028_20685 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_20685 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_20690 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AC028_20690 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AC028_20695 IPR036010 2Fe-2S ferredoxin-like superfamily AC028_20695 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AC028_20695 IPR006656 Molybdopterin oxidoreductase AC028_20695 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AC028_20695 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AC028_20695 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AC028_20695 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AC028_20695 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal AC028_20700 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AC028_20700 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AC028_20700 IPR019554 Soluble ligand binding domain AC028_20700 IPR011537 NADH ubiquinone oxidoreductase, F subunit AC028_20700 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AC028_20700 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AC028_20700 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AC028_20705 IPR042128 NuoE domain AC028_20705 IPR002023 NADH-quinone oxidoreductase subunit E-like AC028_20705 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal AC028_20705 IPR036249 Thioredoxin-like superfamily AC028_20710 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AC028_20710 IPR001135 NADH-quinone oxidoreductase, subunit D AC028_20710 IPR029014 [NiFe]-hydrogenase, large subunit AC028_20710 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AC028_20710 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AC028_20715 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily AC028_20715 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AC028_20715 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site AC028_20715 IPR010218 NADH dehydrogenase, subunit C AC028_20720 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AC028_20720 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AC028_20725 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily AC028_20725 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AC028_20725 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AC028_20740 IPR000652 Triosephosphate isomerase AC028_20740 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AC028_20740 IPR020861 Triosephosphate isomerase, active site AC028_20740 IPR035990 Triosephosphate isomerase superfamily AC028_20740 IPR013785 Aldolase-type TIM barrel AC028_20745 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_20745 IPR036291 NAD(P)-binding domain superfamily AC028_20745 IPR020904 Short-chain dehydrogenase/reductase, conserved site AC028_20750 IPR002559 Transposase, IS4-like AC028_20750 IPR008490 Transposase InsH, N-terminal AC028_20765 IPR005330 MHYT domain AC028_20765 IPR029787 Nucleotide cyclase AC028_20765 IPR035919 EAL domain superfamily AC028_20765 IPR000160 GGDEF domain AC028_20765 IPR001633 EAL domain AC028_20785 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AC028_20785 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AC028_20785 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AC028_20785 IPR005843 Alpha-D-phosphohexomutase, C-terminal AC028_20785 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AC028_20785 IPR016066 Alpha-D-phosphohexomutase, conserved site AC028_20785 IPR006352 Phosphoglucosamine mutase, bacterial type AC028_20785 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AC028_20785 IPR005841 Alpha-D-phosphohexomutase superfamily AC028_20790 IPR041010 Acetyl-coA carboxylase zinc finger domain AC028_20790 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AC028_20790 IPR034733 Acetyl-CoA carboxylase AC028_20790 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AC028_20790 IPR029045 ClpP/crotonase-like domain superfamily AC028_20795 IPR018204 Tryptophan synthase, alpha chain, active site AC028_20795 IPR011060 Ribulose-phosphate binding barrel AC028_20795 IPR002028 Tryptophan synthase, alpha chain AC028_20795 IPR013785 Aldolase-type TIM barrel AC028_20805 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_20805 IPR001926 Pyridoxal-phosphate dependent enzyme AC028_20805 IPR006653 Tryptophan synthase, beta chain, conserved site AC028_20805 IPR006654 Tryptophan synthase, beta chain AC028_20805 IPR023026 Tryptophan synthase beta chain/beta chain-like AC028_20810 IPR005119 LysR, substrate-binding AC028_20810 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 AC028_20810 IPR000847 Transcription regulator HTH, LysR AC028_20810 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_20810 IPR036390 Winged helix DNA-binding domain superfamily AC028_20815 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AC028_20815 IPR013785 Aldolase-type TIM barrel AC028_20815 IPR011060 Ribulose-phosphate binding barrel AC028_20820 IPR020103 Pseudouridine synthase, catalytic domain superfamily AC028_20820 IPR001406 Pseudouridine synthase I, TruA AC028_20820 IPR020095 Pseudouridine synthase I, TruA, C-terminal AC028_20820 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AC028_20840 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type AC028_20840 IPR012080 Aspartate-semialdehyde dehydrogenase AC028_20840 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AC028_20840 IPR036291 NAD(P)-binding domain superfamily AC028_20840 IPR000534 Semialdehyde dehydrogenase, NAD-binding AC028_20845 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC028_20845 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AC028_20845 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_20845 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AC028_20845 IPR036291 NAD(P)-binding domain superfamily AC028_20850 IPR000453 Chorismate synthase AC028_20850 IPR035904 Chorismate synthase AroC superfamily AC028_20850 IPR020541 Chorismate synthase, conserved site AC028_20855 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_20855 IPR004556 Methyltransferase HemK-like AC028_20855 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AC028_20855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_20855 IPR007848 Methyltransferase small domain AC028_20860 IPR036249 Thioredoxin-like superfamily AC028_20860 IPR003782 Copper chaperone SCO1/SenC AC028_20865 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 AC028_20865 IPR033177 Phosphatidylserine decarboxylase AC028_20865 IPR003817 Phosphatidylserine decarboxylase-related AC028_20875 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20875 IPR033186 Helicase HerA-like C-terminal AC028_20880 IPR015797 NUDIX hydrolase-like domain superfamily AC028_20880 IPR004385 Nucleoside diphosphate pyrophosphatase AC028_20880 IPR000086 NUDIX hydrolase domain AC028_20895 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AC028_20895 IPR023459 Transcription elongation factor GreA/GreB family AC028_20895 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AC028_20895 IPR006358 Transcription elongation factor GreB AC028_20895 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AC028_20895 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AC028_20895 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AC028_20895 IPR028624 Transcription elongation factor GreA/GreB AC028_20900 IPR002792 TRAM domain AC028_20900 IPR023404 Radical SAM, alpha/beta horseshoe AC028_20900 IPR007197 Radical SAM AC028_20900 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AC028_20900 IPR038135 Methylthiotransferase, N-terminal domain superfamily AC028_20900 IPR041582 RimO, TRAM domain AC028_20900 IPR020612 Methylthiotransferase, conserved site AC028_20900 IPR005839 Methylthiotransferase AC028_20900 IPR006638 Elp3/MiaB/NifB AC028_20900 IPR013848 Methylthiotransferase, N-terminal AC028_20905 IPR002925 Dienelactone hydrolase AC028_20905 IPR029058 Alpha/Beta hydrolase fold AC028_20925 IPR033704 dUTPase, trimeric AC028_20925 IPR036157 dUTPase-like superfamily AC028_20925 IPR029054 dUTPase-like AC028_20925 IPR011962 dCTP deaminase AC028_20930 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AC028_20930 IPR000808 Mrp, conserved site AC028_20930 IPR019591 Mrp/NBP35 ATP-binding protein AC028_20930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_20935 IPR010917 TonB-dependent receptor, conserved site AC028_20935 IPR037066 TonB-dependent receptor, plug domain superfamily AC028_20935 IPR012910 TonB-dependent receptor, plug domain AC028_20935 IPR039426 Vitamin B12 transporter BtuB-like AC028_20935 IPR010101 TonB-dependent vitamin B12 transporter BtuB AC028_20935 IPR000531 TonB-dependent receptor-like, beta-barrel AC028_20935 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AC028_20945 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_20950 IPR024079 Metallopeptidase, catalytic domain superfamily AC028_20950 IPR000718 Peptidase M13 AC028_20950 IPR018497 Peptidase M13, C-terminal domain AC028_20950 IPR042089 Peptidase M13, domain 2 AC028_20950 IPR008753 Peptidase M13, N-terminal domain AC028_20955 IPR018497 Peptidase M13, C-terminal domain AC028_20955 IPR000718 Peptidase M13 AC028_20955 IPR024079 Metallopeptidase, catalytic domain superfamily AC028_20955 IPR042089 Peptidase M13, domain 2 AC028_20955 IPR008753 Peptidase M13, N-terminal domain AC028_20975 IPR023753 FAD/NAD(P)-binding domain AC028_20975 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AC028_20975 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC028_20975 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AC028_20975 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AC028_20975 IPR006322 Glutathione reductase, eukaryote/bacterial AC028_20975 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_20980 IPR023080 D-amino acid dehydrogenase DadA AC028_20980 IPR006076 FAD dependent oxidoreductase AC028_20980 IPR036188 FAD/NAD(P)-binding domain superfamily AC028_20985 IPR007349 Domain of unknown function DUF418 AC028_20990 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AC028_20995 IPR038765 Papain-like cysteine peptidase superfamily AC028_20995 IPR000064 Endopeptidase, NLPC/P60 domain AC028_21000 IPR038765 Papain-like cysteine peptidase superfamily AC028_21000 IPR000064 Endopeptidase, NLPC/P60 domain AC028_21010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_21010 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AC028_21015 IPR036458 Sodium:dicarboxylate symporter superfamily AC028_21015 IPR001991 Sodium:dicarboxylate symporter AC028_21015 IPR023954 C4-dicarboxylate transport protein AC028_21015 IPR018107 Sodium:dicarboxylate symporter, conserved site AC028_21020 IPR001952 Alkaline phosphatase AC028_21020 IPR018299 Alkaline phosphatase, active site AC028_21020 IPR017850 Alkaline-phosphatase-like, core domain superfamily AC028_21025 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AC028_21025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_21025 IPR012094 tRNA(Ile)-lysidine synthase AC028_21025 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AC028_21025 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AC028_21025 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain AC028_21030 IPR037004 Exonuclease VII, small subunit superfamily AC028_21030 IPR003761 Exonuclease VII, small subunit AC028_21035 IPR033749 Polyprenyl synthetase, conserved site AC028_21035 IPR000092 Polyprenyl synthetase AC028_21035 IPR008949 Isoprenoid synthase domain superfamily AC028_21050 IPR036059 Metalloprotease TldD/PmbA superfamily AC028_21050 IPR035068 Metalloprotease TldD/PmbA, N-terminal AC028_21050 IPR002510 Metalloprotease TldD/PmbA AC028_21055 IPR023153 PSPTO4464-like domain superfamily AC028_21055 IPR006839 Ribosome-associated, YjgA AC028_21060 IPR002510 Metalloprotease TldD/PmbA AC028_21060 IPR036059 Metalloprotease TldD/PmbA superfamily AC028_21060 IPR025502 TldD AC028_21060 IPR035068 Metalloprotease TldD/PmbA, N-terminal AC028_21070 IPR025263 Domain of unknown function DUF3971 AC028_21070 IPR032712 AsmA-like, C-terminal AC028_21070 IPR011836 Conserved hypothetical protein CHP02099 AC028_21075 IPR003029 S1 domain AC028_21075 IPR022967 RNA-binding domain, S1 AC028_21075 IPR012340 Nucleic acid-binding, OB-fold AC028_21075 IPR004659 Ribonuclease E/G AC028_21075 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AC028_21080 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AC028_21080 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_21085 IPR007497 Protein of unknown function DUF541 AC028_21100 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_21100 IPR003742 RNA methyltransferase RlmH AC028_21100 IPR029028 Alpha/beta knot methyltransferases AC028_21110 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AC028_21115 IPR004821 Cytidyltransferase-like domain AC028_21115 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase AC028_21115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_21130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_21130 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AC028_21130 IPR025709 Leucyl-tRNA synthetase, editing domain AC028_21130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_21130 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AC028_21130 IPR002300 Aminoacyl-tRNA synthetase, class Ia AC028_21130 IPR002302 Leucine-tRNA ligase AC028_21130 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AC028_21140 IPR013766 Thioredoxin domain AC028_21140 IPR011990 Tetratricopeptide-like helical domain superfamily AC028_21140 IPR036249 Thioredoxin-like superfamily AC028_21175 IPR007211 Protein of unknown function DUF378 AC028_21180 IPR029000 Cyclophilin-like domain superfamily AC028_21180 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AC028_21180 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AC028_21180 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AC028_21190 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_21190 IPR036390 Winged helix DNA-binding domain superfamily AC028_21190 IPR005119 LysR, substrate-binding AC028_21190 IPR000847 Transcription regulator HTH, LysR AC028_21220 IPR039421 Type I protein exporter AC028_21220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_21220 IPR017871 ABC transporter, conserved site AC028_21220 IPR003439 ABC transporter-like AC028_21220 IPR036640 ABC transporter type 1, transmembrane domain superfamily AC028_21220 IPR011527 ABC transporter type 1, transmembrane domain AC028_21220 IPR003593 AAA+ ATPase domain AC028_21240 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_21240 IPR006143 RND efflux pump, membrane fusion protein AC028_21250 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_21250 IPR002481 Ferric-uptake regulator AC028_21250 IPR036390 Winged helix DNA-binding domain superfamily AC028_21255 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AC028_21255 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AC028_21255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_21255 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AC028_21255 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AC028_21255 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AC028_21255 IPR033910 Glutamyl-tRNA synthetase AC028_21255 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AC028_21280 IPR010364 Uncharacterised protein family, inner membrane CreD AC028_21295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_21295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_21295 IPR003660 HAMP domain AC028_21295 IPR029151 Periplasmic sensor-like domain superfamily AC028_21295 IPR003594 Histidine kinase/HSP90-like ATPase AC028_21295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_21295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AC028_21295 IPR005467 Histidine kinase domain AC028_21300 IPR036388 Winged helix-like DNA-binding domain superfamily AC028_21300 IPR039420 Transcriptional regulatory protein WalR-like AC028_21300 IPR011006 CheY-like superfamily AC028_21300 IPR001867 OmpR/PhoB-type DNA-binding domain AC028_21300 IPR001789 Signal transduction response regulator, receiver domain AC028_21300 IPR016032 Signal transduction response regulator, C-terminal effector AC028_21305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_21305 IPR007473 Ribosomal RNA large subunit methyltransferase J AC028_21305 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AC028_21320 IPR005118 Transcription-repair-coupling factor, C-terminal domain AC028_21320 IPR036101 CarD-like/TRCF domain superfamily AC028_21320 IPR003711 CarD-like/TRCF domain AC028_21320 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_21320 IPR011545 DEAD/DEAH box helicase domain AC028_21320 IPR037235 TRCF-like, C-terminal domain AC028_21320 IPR004576 Transcription-repair coupling factor AC028_21320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_21320 IPR041471 UvrB, interaction domain AC028_21320 IPR001650 Helicase, C-terminal AC028_21330 IPR036641 HPT domain superfamily AC028_21330 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AC028_21330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AC028_21330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AC028_21330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AC028_21330 IPR003594 Histidine kinase/HSP90-like ATPase AC028_21330 IPR035891 CheY-binding domain of CheA AC028_21330 IPR015162 CheY binding AC028_21330 IPR002545 CheW-like domain AC028_21330 IPR036061 CheW-like domain superfamily AC028_21330 IPR005467 Histidine kinase domain AC028_21330 IPR004105 Histidine kinase CheA-like, homodimeric domain AC028_21330 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AC028_21335 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AC028_21335 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AC028_21335 IPR003660 HAMP domain AC028_21335 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AC028_21335 IPR004090 Chemotaxis methyl-accepting receptor AC028_21335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AC028_21340 IPR039315 Chemotaxis protein CheW AC028_21340 IPR002545 CheW-like domain AC028_21340 IPR036061 CheW-like domain superfamily AC028_21380 IPR011978 Uncharacterised protein family UPF0149 AC028_21380 IPR004027 SEC-C motif AC028_21380 IPR036255 YgfB-like superfamily AC028_21395 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AC028_21395 IPR006119 Resolvase, N-terminal catalytic domain AC028_21395 IPR006118 Recombinase, conserved site AC028_21395 IPR006120 Resolvase, HTH domain AC028_21400 IPR007337 RelB antitoxin/Antitoxin DinJ AC028_21400 IPR013321 Arc-type ribbon-helix-helix AC028_21405 IPR004386 Toxin-antitoxin system, YafQ-like toxin AC028_21405 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AC028_21405 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AC028_21465 IPR001736 Phospholipase D/Transphosphatidylase AC028_21465 IPR025202 Phospholipase D-like domain AC028_21475 IPR008258 Transglycosylase SLT domain 1 AC028_21475 IPR023346 Lysozyme-like domain superfamily AC028_21480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_21480 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_21480 IPR001482 Type II/IV secretion system protein AC028_21480 IPR014155 Type IV secretion system protein VirB11 AC028_21485 IPR042217 Type IV secretion system, VirB10/TrbI AC028_21485 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AC028_21490 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AC028_21490 IPR033645 VirB9/CagX/TrbG, C-terminal AC028_21490 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily AC028_21490 IPR014148 P-type conjugative transfer protein VirB9 AC028_21500 IPR007688 Plasmid conjugal transfer TrbL/VirB6 AC028_21550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_21550 IPR025669 AAA domain