TP45_00005 SM00382 ATPases associated with a variety of cellular activities TP45_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain TP45_00010 SM00480 DNA polymerase III beta subunit TP45_00020 SM00387 Histidine kinase-like ATPases TP45_00020 SM00433 TopoisomeraseII TP45_00035 SM00028 Tetratricopeptide repeats TP45_00075 SM00155 Phospholipase D. Active site motifs. TP45_00090 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_00115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_00115 SM00245 tail specific protease TP45_00160 SM00829 Enoylreductase TP45_00165 SM01126 TP45_00165 TP45_00175 SM00944 Pro-kumamolisin, activation domain TP45_00200 SM00867 YceI-like domain TP45_00255 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TP45_00265 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_00265 SM00895 TP45_00265 TP45_00285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_00285 SM00331 Sigma factor PP2C-like phosphatases TP45_00310 SM01126 TP45_00310 TP45_00320 SM01126 TP45_00320 TP45_00360 SM01126 TP45_00360 TP45_00365 SM01126 TP45_00365 TP45_00375 SM01126 TP45_00375 TP45_00420 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen TP45_00440 SM00421 helix_turn_helix, Lux Regulon TP45_00440 SM00448 cheY-homologous receiver domain TP45_00460 SM00862 Transcriptional regulatory protein, C terminal TP45_00550 SM01126 TP45_00550 TP45_00635 SM01126 TP45_00635 TP45_00695 SM01126 TP45_00695 TP45_00755 SM00822 TP45_00755 TP45_00760 SM00822 TP45_00760 TP45_00780 SM00487 DEAD-like helicases superfamily TP45_00780 SM00490 helicase superfamily c-terminal domain TP45_00875 SM01126 TP45_00875 TP45_00885 SM01126 TP45_00885 TP45_00950 SM00883 Chaperonin 10 Kd subunit TP45_00985 SM00878 Biotin carboxylase C-terminal domain TP45_01010 SM00530 Helix-turn-helix XRE-family like proteins TP45_01055 SM00195 Dual specificity phosphatase, catalytic domain TP45_01070 SM00798 AICARFT/IMPCHase bienzyme TP45_01070 SM00851 MGS-like domain TP45_01080 SM01209 TP45_01080 TP45_01080 SM01210 TP45_01080 TP45_01105 SM00563 Phosphate acyltransferases TP45_01155 SM00052 Putative diguanylate phosphodiesterase TP45_01155 SM00267 diguanylate cyclase TP45_01155 SM00448 cheY-homologous receiver domain TP45_01160 SM00073 Histidine Phosphotransfer domain TP45_01160 SM00387 Histidine kinase-like ATPases TP45_01160 SM00388 His Kinase A (phosphoacceptor) domain TP45_01160 SM00448 cheY-homologous receiver domain TP45_01215 SM00100 Cyclic nucleotide-monophosphate binding domain TP45_01215 SM00419 helix_turn_helix, cAMP Regulatory protein TP45_01235 SM00903 Flavin reductase like domain TP45_01255 SM00046 Diacylglycerol kinase catalytic domain (presumed) TP45_01275 SM00271 DnaJ molecular chaperone homology domain TP45_01355 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_01375 SM00237 Domains in Na-Ca exchangers and integrin-beta4 TP45_01385 SM00861 Transketolase, pyrimidine binding domain TP45_01400 SM00487 DEAD-like helicases superfamily TP45_01410 SM00822 TP45_01410 TP45_01465 SM00642 Alpha-amylase domain TP45_01475 SM00642 Alpha-amylase domain TP45_01485 SM00642 Alpha-amylase domain TP45_01490 SM00642 Alpha-amylase domain TP45_01500 SM00267 diguanylate cyclase TP45_01530 SM01126 TP45_01530 TP45_01575 SM00342 helix_turn_helix, arabinose operon control protein TP45_01585 SM01266 TP45_01585 TP45_01605 SM00155 Phospholipase D. Active site motifs. TP45_01745 SM00421 helix_turn_helix, Lux Regulon TP45_01745 SM00448 cheY-homologous receiver domain TP45_01800 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TP45_01815 SM00346 helix_turn_helix isocitrate lyase regulation TP45_01825 SM00091 PAS domain TP45_01825 SM00387 Histidine kinase-like ATPases TP45_01825 SM00388 His Kinase A (phosphoacceptor) domain TP45_01825 SM00448 cheY-homologous receiver domain TP45_01850 SM00564 beta-propeller repeat TP45_01915 SM01126 TP45_01915 TP45_01940 SM00836 DALR anticodon binding domain TP45_01950 SM00382 ATPases associated with a variety of cellular activities TP45_01955 SM01126 TP45_01955 TP45_01965 SM01126 TP45_01965 TP45_02040 SM00354 helix_turn _helix lactose operon repressor TP45_02055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TP45_02095 SM00612 TP45_02095 TP45_02125 SM01007 Class II Aldolase and Adducin N-terminal domain TP45_02150 SM00633 Glycosyl hydrolase family 10 TP45_02180 SM00633 Glycosyl hydrolase family 10 TP45_02230 SM01126 TP45_02230 TP45_02265 SM00369 Leucine-rich repeats, typical (most populated) subfamily TP45_02365 SM00382 ATPases associated with a variety of cellular activities TP45_02400 SM01126 TP45_02400 TP45_02410 SM01126 TP45_02410 TP45_02415 SM01086 C-terminal, D2-small domain, of ClpB protein TP45_02420 SM01126 TP45_02420 TP45_02425 SM00822 TP45_02425 TP45_02430 SM00342 helix_turn_helix, arabinose operon control protein TP45_02500 SM00267 diguanylate cyclase TP45_02570 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TP45_02570 SM01232 TP45_02570 TP45_02580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_02590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_02590 SM00091 PAS domain TP45_02590 SM00267 diguanylate cyclase TP45_02595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_02595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_02595 SM01049 TP45_02595 TP45_02600 SM00637 TP45_02600 TP45_02610 SM00267 diguanylate cyclase TP45_02635 SM00448 cheY-homologous receiver domain TP45_02635 SM00850 LytTr DNA-binding domain TP45_02710 SM00382 ATPases associated with a variety of cellular activities TP45_02710 SM01086 C-terminal, D2-small domain, of ClpB protein TP45_02740 SM00267 diguanylate cyclase TP45_02745 SM01263 TP45_02745 TP45_02760 SM00564 beta-propeller repeat TP45_02765 SM00062 Bacterial periplasmic substrate-binding proteins TP45_02765 SM00248 ankyrin repeats TP45_02780 SM00829 Enoylreductase TP45_02790 SM00382 ATPases associated with a variety of cellular activities TP45_02800 SM00268 Actin TP45_02825 SM00710 Parallel beta-helix repeats TP45_02840 SM00936 Penicillin-binding protein 5, C-terminal domain TP45_02860 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_02865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_02865 SM00245 tail specific protease TP45_02920 SM01350 TP45_02920 TP45_02930 SM00749 bacterial OsmY and nodulation domain TP45_02935 SM00387 Histidine kinase-like ATPases TP45_02935 SM00388 His Kinase A (phosphoacceptor) domain TP45_02940 SM00448 cheY-homologous receiver domain TP45_02945 SM00387 Histidine kinase-like ATPases TP45_02945 SM00388 His Kinase A (phosphoacceptor) domain TP45_02945 SM00448 cheY-homologous receiver domain TP45_02975 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TP45_03000 SM00382 ATPases associated with a variety of cellular activities TP45_03070 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_03070 SM00866 TP45_03070 TP45_03080 SM00354 helix_turn _helix lactose operon repressor TP45_03150 SM00849 Metallo-beta-lactamase superfamily TP45_03155 SM00342 helix_turn_helix, arabinose operon control protein TP45_03170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_03170 SM00387 Histidine kinase-like ATPases TP45_03170 SM00388 His Kinase A (phosphoacceptor) domain TP45_03175 SM00448 cheY-homologous receiver domain TP45_03175 SM00862 Transcriptional regulatory protein, C terminal TP45_03195 SM00829 Enoylreductase TP45_03210 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_03230 SM00382 ATPases associated with a variety of cellular activities TP45_03290 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TP45_03320 SM00387 Histidine kinase-like ATPases TP45_03320 SM00388 His Kinase A (phosphoacceptor) domain TP45_03325 SM00448 cheY-homologous receiver domain TP45_03325 SM00862 Transcriptional regulatory protein, C terminal TP45_03425 SM00842 Cell division protein FtsA TP45_03430 SM00864 Tubulin/FtsZ family, GTPase domain TP45_03430 SM00865 Tubulin/FtsZ family, C-terminal domain TP45_03450 SM00957 SecA DEAD-like domain TP45_03450 SM00958 SecA preprotein cross-linking domain TP45_03475 SM00829 Enoylreductase TP45_03480 SM00944 Pro-kumamolisin, activation domain TP45_03495 SM00642 Alpha-amylase domain TP45_03535 SM00996 S-adenosyl-L-homocysteine hydrolase TP45_03535 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TP45_03545 SM01126 TP45_03545 TP45_03660 SM00382 ATPases associated with a variety of cellular activities TP45_03680 SM00382 ATPases associated with a variety of cellular activities TP45_03690 SM00448 cheY-homologous receiver domain TP45_03690 SM00862 Transcriptional regulatory protein, C terminal TP45_03695 SM00387 Histidine kinase-like ATPases TP45_03695 SM00388 His Kinase A (phosphoacceptor) domain TP45_03745 SM00382 ATPases associated with a variety of cellular activities TP45_03755 SM00382 ATPases associated with a variety of cellular activities TP45_03815 SM00382 ATPases associated with a variety of cellular activities TP45_03830 SM00650 Ribosomal RNA adenine dimethylases TP45_03890 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_03890 SM00895 TP45_03890 TP45_03925 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_04000 SM00448 cheY-homologous receiver domain TP45_04005 SM00387 Histidine kinase-like ATPases TP45_04005 SM00388 His Kinase A (phosphoacceptor) domain TP45_04005 SM00448 cheY-homologous receiver domain TP45_04010 SM00421 helix_turn_helix, Lux Regulon TP45_04075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TP45_04075 SM00475 5'-3' exonuclease TP45_04105 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TP45_04105 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TP45_04220 SM00852 Probable molybdopterin binding domain TP45_04225 SM00028 Tetratricopeptide repeats TP45_04230 SM00937 TP45_04230 TP45_04240 SM00028 Tetratricopeptide repeats TP45_04260 SM01400 TP45_04260 TP45_04310 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TP45_04310 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TP45_04315 SM00649 Ribosomal protein L11/L12 TP45_04340 SM00663 RNA polymerase I subunit A N-terminus TP45_04355 SM00838 Elongation factor G C-terminus TP45_04355 SM00889 Elongation factor G, domain IV TP45_04365 SM01403 TP45_04365 TP45_04385 SM01382 TP45_04385 TP45_04385 SM01383 TP45_04385 TP45_04400 SM00322 K homology RNA-binding domain TP45_04420 SM01374 TP45_04420 TP45_04425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TP45_04485 SM00363 S4 RNA-binding domain TP45_04485 SM01390 TP45_04485 TP45_04490 SM00662 RNA polymerases D TP45_04535 SM00838 Elongation factor G C-terminus TP45_04565 SM00829 Enoylreductase TP45_04610 SM00382 ATPases associated with a variety of cellular activities TP45_04620 SM00829 Enoylreductase TP45_04640 SM00855 Phosphoglycerate mutase family TP45_04685 SM00014 Acid phosphatase homologues TP45_04705 SM00387 Histidine kinase-like ATPases TP45_04705 SM00388 His Kinase A (phosphoacceptor) domain TP45_04710 SM00448 cheY-homologous receiver domain TP45_04710 SM00862 Transcriptional regulatory protein, C terminal TP45_04730 SM01329 TP45_04730 TP45_04780 SM00382 ATPases associated with a variety of cellular activities TP45_04780 SM00994 ClpX C4-type zinc finger TP45_04780 SM01086 C-terminal, D2-small domain, of ClpB protein TP45_04785 SM00382 ATPases associated with a variety of cellular activities TP45_04785 SM00464 Found in ATP-dependent protease La (LON) TP45_04790 SM00411 bacterial (prokaryotic) histone like domain TP45_04815 SM00257 Lysin motif TP45_04820 SM00849 Metallo-beta-lactamase superfamily TP45_04835 SM00479 TP45_04835 TP45_04840 SM00331 Sigma factor PP2C-like phosphatases TP45_04840 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TP45_04865 SM00849 Metallo-beta-lactamase superfamily TP45_04870 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_04900 SM00382 ATPases associated with a variety of cellular activities TP45_04910 SM00493 TP45_04910 TP45_04925 SM00460 Transglutaminase/protease-like homologues TP45_04935 SM00382 ATPases associated with a variety of cellular activities TP45_04980 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TP45_04985 SM00822 TP45_04985 TP45_04995 SM00825 Beta-ketoacyl synthase TP45_05030 SM00382 ATPases associated with a variety of cellular activities TP45_05070 SM01359 TP45_05070 TP45_05070 SM01360 TP45_05070 TP45_05105 SM00271 DnaJ molecular chaperone homology domain TP45_05110 SM00448 cheY-homologous receiver domain TP45_05115 SM00244 prohibitin homologues TP45_05120 SM00244 prohibitin homologues TP45_05125 SM01321 TP45_05125 TP45_05130 SM00788 Adenylosuccinate synthetase TP45_05145 SM00822 TP45_05145 TP45_05220 SM00487 DEAD-like helicases superfamily TP45_05230 SM00220 Serine/Threonine protein kinases, catalytic domain TP45_05245 SM00855 Phosphoglycerate mutase family TP45_05255 SM01126 TP45_05255 TP45_05305 SM00052 Putative diguanylate phosphodiesterase TP45_05310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_05320 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TP45_05325 SM01092 CO dehydrogenase flavoprotein C-terminal domain TP45_05340 SM00974 TP45_05340 TP45_05360 SM00966 SpoVT / AbrB like domain TP45_05385 SM00481 DNA polymerase alpha chain like domain TP45_05395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_05425 SM01126 TP45_05425 TP45_05435 SM00091 PAS domain TP45_05435 SM00342 helix_turn_helix, arabinose operon control protein TP45_05450 SM01060 TP45_05450 TP45_05500 SM00448 cheY-homologous receiver domain TP45_05500 SM00862 Transcriptional regulatory protein, C terminal TP45_05505 SM00387 Histidine kinase-like ATPases TP45_05505 SM00388 His Kinase A (phosphoacceptor) domain TP45_05540 SM00421 helix_turn_helix, Lux Regulon TP45_05540 SM00448 cheY-homologous receiver domain TP45_05555 SM00478 endonuclease III TP45_05575 SM00244 prohibitin homologues TP45_05660 SM00904 Riboflavin kinase TP45_05725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_05730 SM00382 ATPases associated with a variety of cellular activities TP45_05740 SM00862 Transcriptional regulatory protein, C terminal TP45_05745 SM00342 helix_turn_helix, arabinose operon control protein TP45_05770 SM00387 Histidine kinase-like ATPases TP45_05780 SM00387 Histidine kinase-like ATPases TP45_05780 SM00388 His Kinase A (phosphoacceptor) domain TP45_05785 SM00387 Histidine kinase-like ATPases TP45_05785 SM00388 His Kinase A (phosphoacceptor) domain TP45_05785 SM00448 cheY-homologous receiver domain TP45_05815 SM00387 Histidine kinase-like ATPases TP45_05815 SM00388 His Kinase A (phosphoacceptor) domain TP45_05815 SM00448 cheY-homologous receiver domain TP45_05825 SM00138 Methyltransferase, chemotaxis proteins TP45_05830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_05830 SM00387 Histidine kinase-like ATPases TP45_05830 SM00388 His Kinase A (phosphoacceptor) domain TP45_05830 SM00448 cheY-homologous receiver domain TP45_05835 SM00091 PAS domain TP45_05835 SM00387 Histidine kinase-like ATPases TP45_05835 SM00388 His Kinase A (phosphoacceptor) domain TP45_05840 SM00448 cheY-homologous receiver domain TP45_05850 SM00813 Alpha-L-arabinofuranosidase C-terminus TP45_05870 SM00382 ATPases associated with a variety of cellular activities TP45_05870 SM00962 SRP54-type protein, GTPase domain TP45_05870 SM00963 SRP54-type protein, helical bundle domain TP45_05930 SM00363 S4 RNA-binding domain TP45_05945 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TP45_05945 SM00534 ATPase domain of DNA mismatch repair MUTS family TP45_05985 SM00812 Alpha-L-fucosidase TP45_06010 SM00530 Helix-turn-helix XRE-family like proteins TP45_06065 SM01126 TP45_06065 TP45_06080 SM01126 TP45_06080 TP45_06085 SM01126 TP45_06085 TP45_06120 SM00836 DALR anticodon binding domain TP45_06120 SM01016 Arginyl tRNA synthetase N terminal dom TP45_06150 SM01259 TP45_06150 TP45_06175 SM00470 ParB-like nuclease domain TP45_06320 SM00400 zinc finger TP45_06320 SM00493 TP45_06320 TP45_06320 SM00766 DNA primase DnaG DnaB-binding TP45_06345 SM00905 Dihydroneopterin aldolase TP45_06350 SM01217 TP45_06350 TP45_06385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TP45_06395 SM00644 TP45_06395 TP45_06450 SM01150 TP45_06450 TP45_06520 SM00357 Cold shock protein domain TP45_06520 SM00382 ATPases associated with a variety of cellular activities TP45_06520 SM00959 Rho termination factor, N-terminal domain TP45_06530 SM00487 DEAD-like helicases superfamily TP45_06530 SM00490 helicase superfamily c-terminal domain TP45_06535 SM00382 ATPases associated with a variety of cellular activities TP45_06545 SM00448 cheY-homologous receiver domain TP45_06550 SM00986 Uracil DNA glycosylase superfamily TP45_06550 SM00987 UreE urease accessory protein, C-terminal domain TP45_06585 SM00487 DEAD-like helicases superfamily TP45_06585 SM00490 helicase superfamily c-terminal domain TP45_06645 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TP45_06645 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TP45_06645 SM00493 TP45_06645 TP45_06670 SM00257 Lysin motif TP45_06765 SM01126 TP45_06765 TP45_06800 SM01126 TP45_06800 TP45_06995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_06995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_07020 SM00631 TP45_07020 TP45_07025 SM00382 ATPases associated with a variety of cellular activities TP45_07100 SM00382 ATPases associated with a variety of cellular activities TP45_07155 SM00382 ATPases associated with a variety of cellular activities TP45_07155 SM00448 cheY-homologous receiver domain TP45_07165 SM00448 cheY-homologous receiver domain TP45_07170 SM00091 PAS domain TP45_07170 SM00138 Methyltransferase, chemotaxis proteins TP45_07170 SM00911 HWE histidine kinase TP45_07210 SM00387 Histidine kinase-like ATPases TP45_07215 SM00448 cheY-homologous receiver domain TP45_07215 SM00850 LytTr DNA-binding domain TP45_07275 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_07280 SM00986 Uracil DNA glycosylase superfamily TP45_07280 SM00987 UreE urease accessory protein, C-terminal domain TP45_07285 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. TP45_07295 SM00382 ATPases associated with a variety of cellular activities TP45_07350 SM00344 helix_turn_helix ASNC type TP45_07360 SM01005 Alanine racemase, C-terminal domain TP45_07380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_07380 SM00091 PAS domain TP45_07380 SM00387 Histidine kinase-like ATPases TP45_07380 SM00388 His Kinase A (phosphoacceptor) domain TP45_07380 SM00448 cheY-homologous receiver domain TP45_07435 SM00387 Histidine kinase-like ATPases TP45_07435 SM00388 His Kinase A (phosphoacceptor) domain TP45_07435 SM00448 cheY-homologous receiver domain TP45_07455 SM00382 ATPases associated with a variety of cellular activities TP45_07455 SM00930 TP45_07455 TP45_07495 SM00986 Uracil DNA glycosylase superfamily TP45_07495 SM00987 UreE urease accessory protein, C-terminal domain TP45_07565 SM00382 ATPases associated with a variety of cellular activities TP45_07580 SM00830 Chorismate mutase type II TP45_07595 SM00387 Histidine kinase-like ATPases TP45_07600 SM00382 ATPases associated with a variety of cellular activities TP45_07600 SM00448 cheY-homologous receiver domain TP45_07625 SM00382 ATPases associated with a variety of cellular activities TP45_07730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_07750 SM01126 TP45_07750 TP45_07780 SM00487 DEAD-like helicases superfamily TP45_07780 SM00490 helicase superfamily c-terminal domain TP45_07815 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_07840 SM00382 ATPases associated with a variety of cellular activities TP45_07890 SM01126 TP45_07890 TP45_07935 SM00893 Electron transfer flavoprotein domain TP45_07940 SM00893 Electron transfer flavoprotein domain TP45_07965 SM00984 UDP binding domain TP45_07980 SM00882 Coenzyme A transferase TP45_07985 SM00882 Coenzyme A transferase TP45_08010 SM00382 ATPases associated with a variety of cellular activities TP45_08025 SM01126 TP45_08025 TP45_08050 SM00382 ATPases associated with a variety of cellular activities TP45_08135 SM00481 DNA polymerase alpha chain like domain TP45_08175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_08205 SM00267 diguanylate cyclase TP45_08230 SM00972 Spore Coat Protein U domain TP45_08245 SM00972 Spore Coat Protein U domain TP45_08255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_08275 SM01172 TP45_08275 TP45_08280 SM00710 Parallel beta-helix repeats TP45_08280 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses TP45_08305 SM00434 DNA Topoisomerase IV TP45_08310 SM00342 helix_turn_helix, arabinose operon control protein TP45_08315 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_08340 SM01217 TP45_08340 TP45_08345 SM00631 TP45_08345 TP45_08375 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_08395 SM00382 ATPases associated with a variety of cellular activities TP45_08410 SM00947 Carbonic anhydrase TP45_08425 SM00357 Cold shock protein domain TP45_08540 SM00267 diguanylate cyclase TP45_08575 SM00465 GIY-YIG type nucleases (URI domain) TP45_08580 SM00382 ATPases associated with a variety of cellular activities TP45_08610 SM01126 TP45_08610 TP45_08635 SM00965 Secretin and TonB N terminus short domain TP45_08660 SM01126 TP45_08660 TP45_08675 SM01126 TP45_08675 TP45_08710 SM00642 Alpha-amylase domain TP45_08725 SM00354 helix_turn _helix lactose operon repressor TP45_08735 SM00822 TP45_08735 TP45_08750 SM00448 cheY-homologous receiver domain TP45_08750 SM00862 Transcriptional regulatory protein, C terminal TP45_08755 SM00387 Histidine kinase-like ATPases TP45_08755 SM00388 His Kinase A (phosphoacceptor) domain TP45_08765 SM00421 helix_turn_helix, Lux Regulon TP45_08765 SM00448 cheY-homologous receiver domain TP45_08805 SM00387 Histidine kinase-like ATPases TP45_08805 SM00388 His Kinase A (phosphoacceptor) domain TP45_08805 SM00448 cheY-homologous receiver domain TP45_08825 SM00919 Malic enzyme, NAD binding domain TP45_08825 SM01274 TP45_08825 TP45_08835 SM00530 Helix-turn-helix XRE-family like proteins TP45_08845 SM01126 TP45_08845 TP45_08850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_08925 SM00271 DnaJ molecular chaperone homology domain TP45_08965 SM00382 ATPases associated with a variety of cellular activities TP45_08990 SM00861 Transketolase, pyrimidine binding domain TP45_09000 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TP45_09025 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_09025 SM01091 Transporter associated domain TP45_09055 SM00382 ATPases associated with a variety of cellular activities TP45_09060 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_09075 SM00984 UDP binding domain TP45_09095 SM00354 helix_turn _helix lactose operon repressor TP45_09115 SM01018 B12 binding domain TP45_09125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TP45_09185 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_09185 SM00357 Cold shock protein domain TP45_09185 SM00955 TP45_09185 TP45_09195 SM01126 TP45_09195 TP45_09205 SM00967 RNA 2'-O ribose methyltransferase substrate binding TP45_09210 SM00267 diguanylate cyclase TP45_09215 SM00479 TP45_09215 TP45_09230 SM00382 ATPases associated with a variety of cellular activities TP45_09265 SM00947 Carbonic anhydrase TP45_09275 SM00478 endonuclease III TP45_09300 SM00450 Rhodanese Homology Domain TP45_09310 SM00644 TP45_09310 TP45_09330 SM00382 ATPases associated with a variety of cellular activities TP45_09335 SM00981 TP45_09335 TP45_09360 SM00479 TP45_09360 TP45_09385 SM00947 Carbonic anhydrase TP45_09430 SM00421 helix_turn_helix, Lux Regulon TP45_09430 SM00448 cheY-homologous receiver domain TP45_09500 SM00968 SMC proteins Flexible Hinge Domain TP45_09505 SM00771 ZipA, C-terminal domain (FtsZ-binding) TP45_09520 SM00292 breast cancer carboxy-terminal domain TP45_09520 SM00532 Ligase N family TP45_09540 SM00434 DNA Topoisomerase IV TP45_09545 SM00564 beta-propeller repeat TP45_09585 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_09585 SM00866 TP45_09585 TP45_09605 SM00240 Forkhead associated domain TP45_09625 SM00830 Chorismate mutase type II TP45_09670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_09670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_09680 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_09695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_09695 SM00091 PAS domain TP45_09695 SM00387 Histidine kinase-like ATPases TP45_09695 SM00388 His Kinase A (phosphoacceptor) domain TP45_09695 SM00448 cheY-homologous receiver domain TP45_09700 SM00448 cheY-homologous receiver domain TP45_09705 SM00382 ATPases associated with a variety of cellular activities TP45_09710 SM00091 PAS domain TP45_09710 SM00387 Histidine kinase-like ATPases TP45_09710 SM00388 His Kinase A (phosphoacceptor) domain TP45_09710 SM00448 cheY-homologous receiver domain TP45_09860 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_09870 SM00382 ATPases associated with a variety of cellular activities TP45_09895 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_09895 SM01091 Transporter associated domain TP45_09920 SM00387 Histidine kinase-like ATPases TP45_09920 SM00433 TopoisomeraseII TP45_09945 SM01192 TP45_09945 TP45_09945 SM01193 TP45_09945 TP45_09970 SM00463 Small MutS-related domain TP45_09990 SM00257 Lysin motif TP45_10000 SM01103 TP45_10000 TP45_10010 SM00382 ATPases associated with a variety of cellular activities TP45_10050 SM00382 ATPases associated with a variety of cellular activities TP45_10060 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TP45_10075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_10075 SM00091 PAS domain TP45_10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10130 SM00670 Large family of predicted nucleotide-binding domains TP45_10150 SM01130 TP45_10150 TP45_10175 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TP45_10220 SM00758 TP45_10220 TP45_10255 SM01126 TP45_10255 TP45_10330 SM00052 Putative diguanylate phosphodiesterase TP45_10330 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_10330 SM00267 diguanylate cyclase TP45_10340 SM00448 cheY-homologous receiver domain TP45_10345 SM00387 Histidine kinase-like ATPases TP45_10355 SM00014 Acid phosphatase homologues TP45_10450 SM00100 Cyclic nucleotide-monophosphate binding domain TP45_10450 SM00419 helix_turn_helix, cAMP Regulatory protein TP45_10515 SM01126 TP45_10515 TP45_10530 SM01007 Class II Aldolase and Adducin N-terminal domain TP45_10575 SM00841 Elongation factor P, C-terminal TP45_10575 SM01185 TP45_10575 TP45_10580 SM00822 TP45_10580 TP45_10600 SM00899 TP45_10600 TP45_10635 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TP45_10645 SM00851 MGS-like domain TP45_10645 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TP45_10670 SM00850 LytTr DNA-binding domain TP45_10675 SM00937 TP45_10675 TP45_10685 SM00448 cheY-homologous receiver domain TP45_10685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_10695 SM00073 Histidine Phosphotransfer domain TP45_10695 SM00387 Histidine kinase-like ATPases TP45_10695 SM00388 His Kinase A (phosphoacceptor) domain TP45_10695 SM00448 cheY-homologous receiver domain TP45_10725 SM00966 SpoVT / AbrB like domain TP45_10745 SM00052 Putative diguanylate phosphodiesterase TP45_10745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_10745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_10745 SM00091 PAS domain TP45_10745 SM00267 diguanylate cyclase TP45_10750 SM00448 cheY-homologous receiver domain TP45_10760 SM00138 Methyltransferase, chemotaxis proteins TP45_10765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10775 SM00260 Two component signalling adaptor domain TP45_10785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10825 SM01126 TP45_10825 TP45_10830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10845 SM01049 TP45_10845 TP45_10860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_10860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_10865 SM00073 Histidine Phosphotransfer domain TP45_10865 SM00260 Two component signalling adaptor domain TP45_10865 SM00387 Histidine kinase-like ATPases TP45_10865 SM01231 TP45_10865 TP45_10870 SM00448 cheY-homologous receiver domain TP45_10880 SM00260 Two component signalling adaptor domain TP45_10910 SM01126 TP45_10910 TP45_10935 SM01126 TP45_10935 TP45_10965 SM00073 Histidine Phosphotransfer domain TP45_10965 SM00260 Two component signalling adaptor domain TP45_10965 SM00387 Histidine kinase-like ATPases TP45_10965 SM01231 TP45_10965 TP45_10975 SM00448 cheY-homologous receiver domain TP45_10990 SM00382 ATPases associated with a variety of cellular activities TP45_10990 SM00962 SRP54-type protein, GTPase domain TP45_11005 SM00052 Putative diguanylate phosphodiesterase TP45_11005 SM00267 diguanylate cyclase TP45_11010 SM00267 diguanylate cyclase TP45_11035 SM01126 TP45_11035 TP45_11075 SM00382 ATPases associated with a variety of cellular activities TP45_11105 SM01126 TP45_11105 TP45_11140 SM01126 TP45_11140 TP45_11185 SM00382 ATPases associated with a variety of cellular activities TP45_11190 SM00448 cheY-homologous receiver domain TP45_11200 SM00421 helix_turn_helix, Lux Regulon TP45_11200 SM00448 cheY-homologous receiver domain TP45_11240 SM00047 Lysozyme subfamily 2 TP45_11285 SM00260 Two component signalling adaptor domain TP45_11285 SM00448 cheY-homologous receiver domain TP45_11290 SM00858 TP45_11290 TP45_11305 SM00387 Histidine kinase-like ATPases TP45_11310 SM00052 Putative diguanylate phosphodiesterase TP45_11310 SM00267 diguanylate cyclase TP45_11310 SM00448 cheY-homologous receiver domain TP45_11315 SM00091 PAS domain TP45_11315 SM00387 Histidine kinase-like ATPases TP45_11320 SM00052 Putative diguanylate phosphodiesterase TP45_11320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_11320 SM00091 PAS domain TP45_11320 SM00267 diguanylate cyclase TP45_11330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_11355 SM00382 ATPases associated with a variety of cellular activities TP45_11355 SM01086 C-terminal, D2-small domain, of ClpB protein TP45_11360 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_11380 SM00382 ATPases associated with a variety of cellular activities TP45_11380 SM00843 TP45_11380 TP45_11400 SM00382 ATPases associated with a variety of cellular activities TP45_11425 SM00562 TP45_11425 TP45_11435 SM00028 Tetratricopeptide repeats TP45_11450 SM00564 beta-propeller repeat TP45_11455 SM00382 ATPases associated with a variety of cellular activities TP45_11460 SM00852 Probable molybdopterin binding domain TP45_11465 SM00450 Rhodanese Homology Domain TP45_11510 SM00852 Probable molybdopterin binding domain TP45_11525 SM00342 helix_turn_helix, arabinose operon control protein TP45_11530 SM00822 TP45_11530 TP45_11550 SM00529 Helix-turn-helix diphteria tox regulatory element TP45_11560 SM00479 TP45_11560 TP45_11630 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_11630 SM00732 Likely ribonuclease with RNase H fold. TP45_11640 SM00448 cheY-homologous receiver domain TP45_11730 SM00382 ATPases associated with a variety of cellular activities TP45_11780 SM00382 ATPases associated with a variety of cellular activities TP45_11790 SM00849 Metallo-beta-lactamase superfamily TP45_11805 SM00382 ATPases associated with a variety of cellular activities TP45_11820 SM00226 Low molecular weight phosphatase family TP45_11845 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TP45_11845 SM00465 GIY-YIG type nucleases (URI domain) TP45_11875 SM00984 UDP binding domain TP45_11895 SM00450 Rhodanese Homology Domain TP45_11900 SM00421 helix_turn_helix, Lux Regulon TP45_11900 SM00448 cheY-homologous receiver domain TP45_11910 SM00363 S4 RNA-binding domain TP45_11975 SM01126 TP45_11975 TP45_11980 SM01126 TP45_11980 TP45_11990 SM00448 cheY-homologous receiver domain TP45_11990 SM00911 HWE histidine kinase TP45_12015 SM01126 TP45_12015 TP45_12100 SM01034 Sensors of blue-light using FAD TP45_12105 SM01126 TP45_12105 TP45_12110 SM00052 Putative diguanylate phosphodiesterase TP45_12180 SM00342 helix_turn_helix, arabinose operon control protein TP45_12185 SM00387 Histidine kinase-like ATPases TP45_12195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_12265 SM01126 TP45_12265 TP45_12290 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_12290 SM01240 TP45_12290 TP45_12315 SM00822 TP45_12315 TP45_12325 SM00028 Tetratricopeptide repeats TP45_12335 SM00411 bacterial (prokaryotic) histone like domain TP45_12340 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_12415 SM00354 helix_turn _helix lactose operon repressor TP45_12440 SM00363 S4 RNA-binding domain TP45_12465 SM00382 ATPases associated with a variety of cellular activities TP45_12515 SM00357 Cold shock protein domain TP45_12520 SM00382 ATPases associated with a variety of cellular activities TP45_12525 SM00382 ATPases associated with a variety of cellular activities TP45_12565 SM00530 Helix-turn-helix XRE-family like proteins TP45_12570 SM00382 ATPases associated with a variety of cellular activities TP45_12595 SM01126 TP45_12595 TP45_12665 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TP45_12680 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TP45_12695 SM00859 Semialdehyde dehydrogenase, NAD binding domain TP45_12735 SM00840 TP45_12735 TP45_12760 SM01234 TP45_12760 TP45_12795 SM00849 Metallo-beta-lactamase superfamily TP45_12810 SM01126 TP45_12810 TP45_12830 SM01126 TP45_12830 TP45_12850 SM00841 Elongation factor P, C-terminal TP45_12850 SM01185 TP45_12850 TP45_12860 SM00052 Putative diguanylate phosphodiesterase TP45_12860 SM00267 diguanylate cyclase TP45_12860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_12895 SM00382 ATPases associated with a variety of cellular activities TP45_12900 SM00382 ATPases associated with a variety of cellular activities TP45_12900 SM00487 DEAD-like helicases superfamily TP45_12900 SM00490 helicase superfamily c-terminal domain TP45_12925 SM00357 Cold shock protein domain TP45_12930 SM01322 TP45_12930 TP45_12940 SM00052 Putative diguanylate phosphodiesterase TP45_12940 SM00267 diguanylate cyclase TP45_12955 SM00822 TP45_12955 TP45_12975 SM00853 MutL C terminal dimerisation domain TP45_12975 SM01340 TP45_12975 TP45_12980 SM00646 TP45_12980 TP45_13015 SM00474 3'-5' exonuclease TP45_13030 SM00528 Domain in histone-like proteins of HNS family TP45_13045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_13045 SM00267 diguanylate cyclase TP45_13050 SM00260 Two component signalling adaptor domain TP45_13055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_13055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_13065 SM00487 DEAD-like helicases superfamily TP45_13065 SM00490 helicase superfamily c-terminal domain TP45_13120 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_13145 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_13145 SM01091 Transporter associated domain TP45_13180 SM00382 ATPases associated with a variety of cellular activities TP45_13210 SM01230 TP45_13210 TP45_13220 SM01230 TP45_13220 TP45_13230 SM00267 diguanylate cyclase TP45_13230 SM00448 cheY-homologous receiver domain TP45_13245 SM01126 TP45_13245 TP45_13285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_13285 SM00091 PAS domain TP45_13285 SM00387 Histidine kinase-like ATPases TP45_13285 SM00388 His Kinase A (phosphoacceptor) domain TP45_13285 SM00448 cheY-homologous receiver domain TP45_13285 SM01079 TP45_13285 TP45_13290 SM00448 cheY-homologous receiver domain TP45_13290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_13345 SM00354 helix_turn _helix lactose operon repressor TP45_13395 SM01323 TP45_13395 TP45_13410 SM00344 helix_turn_helix ASNC type TP45_13500 SM00387 Histidine kinase-like ATPases TP45_13510 SM01126 TP45_13510 TP45_13525 SM01126 TP45_13525 TP45_13575 SM00944 Pro-kumamolisin, activation domain TP45_13625 SM01130 TP45_13625 TP45_13650 SM00342 helix_turn_helix, arabinose operon control protein TP45_13655 SM00382 ATPases associated with a variety of cellular activities TP45_13655 SM00962 SRP54-type protein, GTPase domain TP45_13655 SM00963 SRP54-type protein, helical bundle domain TP45_13660 SM00478 endonuclease III TP45_13670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_13670 SM00091 PAS domain TP45_13670 SM00387 Histidine kinase-like ATPases TP45_13670 SM00388 His Kinase A (phosphoacceptor) domain TP45_13670 SM00448 cheY-homologous receiver domain TP45_13685 SM00465 GIY-YIG type nucleases (URI domain) TP45_13715 SM00507 HNH nucleases TP45_13720 SM00861 Transketolase, pyrimidine binding domain TP45_13745 SM00849 Metallo-beta-lactamase superfamily TP45_13830 SM00422 helix_turn_helix, mercury resistance TP45_13835 SM00411 bacterial (prokaryotic) histone like domain TP45_13840 SM00873 B3/4 domain TP45_13840 SM00874 tRNA synthetase B5 domain TP45_13840 SM00896 Ferredoxin-fold anticodon binding domain TP45_13865 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TP45_13870 SM00354 helix_turn _helix lactose operon repressor TP45_13880 SM01126 TP45_13880 TP45_13890 SM01126 TP45_13890 TP45_13925 SM00487 DEAD-like helicases superfamily TP45_13925 SM00490 helicase superfamily c-terminal domain TP45_14020 SM01001 AIR carboxylase TP45_14040 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_14040 SM00322 K homology RNA-binding domain TP45_14045 SM01387 TP45_14045 TP45_14065 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_14065 SM00322 K homology RNA-binding domain TP45_14115 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TP45_14120 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TP45_14165 SM00822 TP45_14165 TP45_14185 SM00052 Putative diguanylate phosphodiesterase TP45_14185 SM00267 diguanylate cyclase TP45_14185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_14260 SM00859 Semialdehyde dehydrogenase, NAD binding domain TP45_14290 SM00257 Lysin motif TP45_14320 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_14385 SM01160 TP45_14385 TP45_14440 SM00098 Alkaline phosphatase homologues TP45_14445 SM00977 TilS substrate C-terminal domain TP45_14495 SM00316 Ribosomal protein S1-like RNA-binding domain TP45_14570 SM01126 TP45_14570 TP45_14640 SM00382 ATPases associated with a variety of cellular activities TP45_14655 SM01126 TP45_14655 TP45_14665 SM00448 cheY-homologous receiver domain TP45_14665 SM00862 Transcriptional regulatory protein, C terminal TP45_14670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_14670 SM00387 Histidine kinase-like ATPases TP45_14670 SM00388 His Kinase A (phosphoacceptor) domain TP45_14705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_14705 SM00267 diguanylate cyclase TP45_14710 SM00363 S4 RNA-binding domain TP45_14715 SM00052 Putative diguanylate phosphodiesterase TP45_14715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TP45_14715 SM00091 PAS domain TP45_14715 SM00267 diguanylate cyclase TP45_14720 SM00487 DEAD-like helicases superfamily TP45_14720 SM00490 helicase superfamily c-terminal domain TP45_14760 SM00342 helix_turn_helix, arabinose operon control protein TP45_14760 SM00478 endonuclease III TP45_14760 SM01009 AlkA N-terminal domain TP45_14780 SM00829 Enoylreductase TP45_14815 SM01126 TP45_14815 TP45_14850 SM00342 helix_turn_helix, arabinose operon control protein TP45_14890 SM01126 TP45_14890 TP45_14940 SM00645 Papain family cysteine protease TP45_14950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_14950 SM00387 Histidine kinase-like ATPases TP45_14950 SM00388 His Kinase A (phosphoacceptor) domain TP45_14955 SM00448 cheY-homologous receiver domain TP45_14955 SM00862 Transcriptional regulatory protein, C terminal TP45_14970 SM01126 TP45_14970 TP45_14975 SM00487 DEAD-like helicases superfamily TP45_14975 SM00490 helicase superfamily c-terminal domain TP45_14975 SM00982 TP45_14975 TP45_14975 SM01058 CarD-like/TRCF domain TP45_14985 SM00073 Histidine Phosphotransfer domain TP45_14985 SM00260 Two component signalling adaptor domain TP45_14985 SM00387 Histidine kinase-like ATPases TP45_14985 SM01231 TP45_14985 TP45_14990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_14990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_14995 SM00260 Two component signalling adaptor domain TP45_15000 SM00052 Putative diguanylate phosphodiesterase TP45_15000 SM00448 cheY-homologous receiver domain TP45_15005 SM00138 Methyltransferase, chemotaxis proteins TP45_15010 SM00448 cheY-homologous receiver domain TP45_15015 SM00155 Phospholipase D. Active site motifs. TP45_15030 SM00855 Phosphoglycerate mutase family TP45_15075 SM01126 TP45_15075 TP45_15085 SM00248 ankyrin repeats TP45_15125 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TP45_15130 SM01092 CO dehydrogenase flavoprotein C-terminal domain TP45_15140 SM00829 Enoylreductase TP45_15145 SM00267 diguanylate cyclase TP45_15210 SM00732 Likely ribonuclease with RNase H fold. TP45_15245 SM00382 ATPases associated with a variety of cellular activities TP45_15260 SM00411 bacterial (prokaryotic) histone like domain TP45_15290 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain TP45_15305 SM00382 ATPases associated with a variety of cellular activities TP45_15335 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TP45_15340 SM00671 Sel1-like repeats. TP45_15455 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_15475 SM00382 ATPases associated with a variety of cellular activities TP45_15520 SM00924 MgtE intracellular N domain TP45_15550 SM00656 TP45_15550 TP45_15565 SM00421 helix_turn_helix, Lux Regulon TP45_15580 SM01126 TP45_15580 TP45_15605 SM00849 Metallo-beta-lactamase superfamily TP45_15615 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TP45_15640 SM00422 helix_turn_helix, mercury resistance TP45_15720 SM00387 Histidine kinase-like ATPases TP45_15720 SM00388 His Kinase A (phosphoacceptor) domain TP45_15720 SM00448 cheY-homologous receiver domain TP45_15740 SM01126 TP45_15740 TP45_15750 SM00387 Histidine kinase-like ATPases TP45_15750 SM00388 His Kinase A (phosphoacceptor) domain TP45_15750 SM00448 cheY-homologous receiver domain TP45_15755 SM00867 YceI-like domain TP45_15765 SM00867 YceI-like domain TP45_15825 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_15950 SM00812 Alpha-L-fucosidase TP45_15955 SM00636 TP45_15955 TP45_15970 SM00758 TP45_15970 TP45_15970 SM01217 TP45_15970 TP45_15995 SM01149 TP45_15995 TP45_16045 SM01126 TP45_16045 TP45_16060 SM00260 Two component signalling adaptor domain TP45_16070 SM00073 Histidine Phosphotransfer domain TP45_16070 SM00260 Two component signalling adaptor domain TP45_16070 SM00387 Histidine kinase-like ATPases TP45_16070 SM00448 cheY-homologous receiver domain TP45_16070 SM01231 TP45_16070 TP45_16075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_16080 SM00260 Two component signalling adaptor domain TP45_16085 SM00448 cheY-homologous receiver domain TP45_16090 SM00448 cheY-homologous receiver domain TP45_16115 SM00491 TP45_16115 TP45_16140 SM00954 Region found in RelA / SpoT proteins TP45_16185 SM00382 ATPases associated with a variety of cellular activities TP45_16185 SM00487 DEAD-like helicases superfamily TP45_16185 SM00490 helicase superfamily c-terminal domain TP45_16185 SM00847 Helicase associated domain (HA2) Add an annotation TP45_16195 SM00341 Helicase and RNase D C-terminal TP45_16195 SM00487 DEAD-like helicases superfamily TP45_16195 SM00490 helicase superfamily c-terminal domain TP45_16195 SM00956 TP45_16195 TP45_16205 SM00448 cheY-homologous receiver domain TP45_16230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_16230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_16245 SM00448 cheY-homologous receiver domain TP45_16250 SM00091 PAS domain TP45_16250 SM00911 HWE histidine kinase TP45_16305 SM00382 ATPases associated with a variety of cellular activities TP45_16315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TP45_16350 SM00834 Putative regulatory protein TP45_16380 SM01126 TP45_16380 TP45_16400 SM00382 ATPases associated with a variety of cellular activities TP45_16505 SM00855 Phosphoglycerate mutase family TP45_16565 SM00382 ATPases associated with a variety of cellular activities TP45_16565 SM01086 C-terminal, D2-small domain, of ClpB protein TP45_16575 SM00382 ATPases associated with a variety of cellular activities TP45_16600 SM01126 TP45_16600 TP45_16665 SM00564 beta-propeller repeat TP45_16670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_16715 SM00881 CoA binding domain TP45_16725 SM00387 Histidine kinase-like ATPases TP45_16725 SM00388 His Kinase A (phosphoacceptor) domain TP45_16730 SM00382 ATPases associated with a variety of cellular activities TP45_16730 SM00448 cheY-homologous receiver domain TP45_16785 SM00387 Histidine kinase-like ATPases TP45_16785 SM00388 His Kinase A (phosphoacceptor) domain TP45_16790 SM00448 cheY-homologous receiver domain TP45_16790 SM00862 Transcriptional regulatory protein, C terminal TP45_16805 SM00642 Alpha-amylase domain TP45_16810 SM01126 TP45_16810 TP45_16815 SM00528 Domain in histone-like proteins of HNS family TP45_16825 SM00318 Staphylococcal nuclease homologues TP45_16860 SM00869 Autotransporter beta-domain TP45_16920 SM00354 helix_turn _helix lactose operon repressor TP45_16950 SM00967 RNA 2'-O ribose methyltransferase substrate binding TP45_17035 SM01126 TP45_17035 TP45_17095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_17095 SM00387 Histidine kinase-like ATPases TP45_17165 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TP45_17190 SM00849 Metallo-beta-lactamase superfamily TP45_17205 SM00382 ATPases associated with a variety of cellular activities TP45_17295 SM00861 Transketolase, pyrimidine binding domain TP45_17310 SM00028 Tetratricopeptide repeats TP45_17310 SM00327 von Willebrand factor (vWF) type A domain TP45_17315 SM00327 von Willebrand factor (vWF) type A domain TP45_17330 SM00382 ATPases associated with a variety of cellular activities TP45_17335 SM00965 Secretin and TonB N terminus short domain TP45_17355 SM00842 Cell division protein FtsA TP45_17385 SM00487 DEAD-like helicases superfamily TP45_17385 SM00490 helicase superfamily c-terminal domain TP45_17395 SM00858 TP45_17395 TP45_17405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TP45_17420 SM01130 TP45_17420 TP45_17430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_17430 SM00954 Region found in RelA / SpoT proteins TP45_17435 SM01409 TP45_17435 TP45_17440 SM00072 Guanylate kinase homologues. TP45_17465 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_17485 SM01011 Aminopeptidase P, N-terminal domain TP45_17550 SM00028 Tetratricopeptide repeats TP45_17550 SM00382 ATPases associated with a variety of cellular activities TP45_17550 SM00421 helix_turn_helix, Lux Regulon TP45_17620 SM00464 Found in ATP-dependent protease La (LON) TP45_17670 SM00342 helix_turn_helix, arabinose operon control protein TP45_17675 SM00862 Transcriptional regulatory protein, C terminal TP45_17690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP45_17720 SM00917 LeuA allosteric (dimerisation) domain TP45_17725 SM01329 TP45_17725 TP45_17745 SM00267 diguanylate cyclase TP45_17825 SM01126 TP45_17825 TP45_17865 SM00450 Rhodanese Homology Domain TP45_17935 SM00028 Tetratricopeptide repeats TP45_18015 SM00345 helix_turn_helix gluconate operon transcriptional repressor TP45_18015 SM00866 TP45_18015 TP45_18075 SM00382 ATPases associated with a variety of cellular activities TP45_18095 SM01126 TP45_18095 TP45_18105 SM01211 TP45_18105 TP45_18200 SM01126 TP45_18200 TP45_18210 SM01126 TP45_18210 TP45_18375 SM00382 ATPases associated with a variety of cellular activities TP45_18600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TP45_18605 SM00869 Autotransporter beta-domain TP45_18655 SM00487 DEAD-like helicases superfamily TP45_18655 SM00490 helicase superfamily c-terminal domain TP45_18670 SM00357 Cold shock protein domain TP45_18705 SM01118 TP45_18705 TP45_18715 SM00448 cheY-homologous receiver domain TP45_18730 SM00358 Double-stranded RNA binding motif TP45_18730 SM00535 Ribonuclease III family TP45_18745 SM00838 Elongation factor G C-terminus TP45_18750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_18780 SM01126 TP45_18780 TP45_18820 SM00938 Nitrogen regulatory protein P-II TP45_18830 SM00382 ATPases associated with a variety of cellular activities TP45_18845 SM00052 Putative diguanylate phosphodiesterase TP45_18865 SM01126 TP45_18865 TP45_18875 SM00244 prohibitin homologues TP45_18925 SM00448 cheY-homologous receiver domain TP45_18925 SM00862 Transcriptional regulatory protein, C terminal TP45_18930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_18930 SM00387 Histidine kinase-like ATPases TP45_18930 SM00388 His Kinase A (phosphoacceptor) domain TP45_18955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP45_18995 SM01060 TP45_18995 TP45_19010 SM00421 helix_turn_helix, Lux Regulon TP45_19010 SM00448 cheY-homologous receiver domain TP45_19025 SM00382 ATPases associated with a variety of cellular activities TP45_19065 SM00849 Metallo-beta-lactamase superfamily TP45_19095 SM00960 Roadblock/LC7 domain TP45_19160 SM00387 Histidine kinase-like ATPases TP45_19160 SM00388 His Kinase A (phosphoacceptor) domain TP45_19165 SM00448 cheY-homologous receiver domain TP45_19165 SM00862 Transcriptional regulatory protein, C terminal TP45_19185 SM00248 ankyrin repeats TP45_19190 SM01060 TP45_19190 TP45_19200 SM00491 TP45_19200 TP45_19230 SM00477 DNA/RNA non-specific endonuclease TP45_19230 SM00892 DNA/RNA non-specific endonuclease TP45_19245 SM01004 Delta-aminolevulinic acid dehydratase TP45_19270 SM01126 TP45_19270 TP45_19295 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TP45_19315 SM00382 ATPases associated with a variety of cellular activities TP45_19325 SM00530 Helix-turn-helix XRE-family like proteins TP45_19355 SM00382 ATPases associated with a variety of cellular activities TP45_19415 SM00881 CoA binding domain TP45_19420 SM00116 Domain in cystathionine beta-synthase and other proteins. TP45_19420 SM00924 MgtE intracellular N domain TP45_19425 SM01057 Eukaryotic-type carbonic anhydrase TP45_19445 SM00248 ankyrin repeats TP45_19455 SM00825 Beta-ketoacyl synthase TP45_19480 SM00822 TP45_19480 TP45_19525 SM00563 Phosphate acyltransferases TP45_19580 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TP45_19580 SM00474 3'-5' exonuclease TP45_19580 SM00475 5'-3' exonuclease TP45_19580 SM00482 DNA polymerase A domain TP45_19595 SM00912 haemagglutination activity domain TP45_19615 SM00331 Sigma factor PP2C-like phosphatases TP45_19615 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TP45_19650 SM00240 Forkhead associated domain TP45_19665 SM00028 Tetratricopeptide repeats TP45_19675 SM00220 Serine/Threonine protein kinases, catalytic domain TP45_19695 SM00965 Secretin and TonB N terminus short domain TP45_19705 SM00915 Jacalin-like lectin domain TP45_19725 SM01126 TP45_19725 TP45_19745 SM01126 TP45_19745 TP45_19800 SM00642 Alpha-amylase domain TP45_19805 SM00642 Alpha-amylase domain TP45_19810 SM00642 Alpha-amylase domain TP45_19860 SM00354 helix_turn _helix lactose operon repressor TP45_19895 SM00344 helix_turn_helix ASNC type TP45_19915 SM00382 ATPases associated with a variety of cellular activities TP45_19930 SM00382 ATPases associated with a variety of cellular activities TP45_19985 SM00855 Phosphoglycerate mutase family TP45_19990 SM00867 YceI-like domain TP45_19995 SM00155 Phospholipase D. Active site motifs. TP45_20005 SM00563 Phosphate acyltransferases TP45_20020 SM00028 Tetratricopeptide repeats TP45_20030 SM00829 Enoylreductase TP45_20045 SM01230 TP45_20045 TP45_20050 SM00938 Nitrogen regulatory protein P-II TP45_20060 SM00387 Histidine kinase-like ATPases TP45_20060 SM00388 His Kinase A (phosphoacceptor) domain TP45_20065 SM00382 ATPases associated with a variety of cellular activities TP45_20065 SM00448 cheY-homologous receiver domain TP45_20125 SM00450 Rhodanese Homology Domain TP45_20150 SM01126 TP45_20150 TP45_20160 SM00387 Histidine kinase-like ATPases TP45_20160 SM00388 His Kinase A (phosphoacceptor) domain TP45_20165 SM00382 ATPases associated with a variety of cellular activities TP45_20165 SM00448 cheY-homologous receiver domain TP45_20225 SM00028 Tetratricopeptide repeats TP45_20225 SM00862 Transcriptional regulatory protein, C terminal TP45_20285 SM00563 Phosphate acyltransferases TP45_20325 SM00342 helix_turn_helix, arabinose operon control protein TP45_20350 SM00100 Cyclic nucleotide-monophosphate binding domain TP45_20350 SM00267 diguanylate cyclase TP45_20390 SM00878 Biotin carboxylase C-terminal domain TP45_20415 SM00953 TP45_20415 TP45_20455 SM00833 Cobalamin synthesis protein cobW C-terminal domain TP45_20485 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_20520 SM00829 Enoylreductase TP45_20550 SM00487 DEAD-like helicases superfamily TP45_20550 SM00490 helicase superfamily c-terminal domain TP45_20550 SM00847 Helicase associated domain (HA2) Add an annotation TP45_20675 SM00422 helix_turn_helix, mercury resistance TP45_20710 SM00448 cheY-homologous receiver domain TP45_20710 SM00862 Transcriptional regulatory protein, C terminal TP45_20715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP45_20715 SM00387 Histidine kinase-like ATPases TP45_20715 SM00388 His Kinase A (phosphoacceptor) domain TP45_20860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP45_20865 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_20885 SM00342 helix_turn_helix, arabinose operon control protein TP45_20915 SM00420 helix_turn_helix, Deoxyribose operon repressor TP45_20915 SM01134 TP45_20915 TP45_20930 SM00882 Coenzyme A transferase TP45_20935 SM00882 Coenzyme A transferase TP45_20955 SM00998 Adenylosuccinate lyase C-terminus TP45_20975 SM00346 helix_turn_helix isocitrate lyase regulation TP45_20980 SM00090 RIO-like kinase TP45_21000 SM01228 TP45_21000 TP45_21055 SM00729 Elongator protein 3, MiaB family, Radical SAM TP45_21055 SM00876 Biotin and Thiamin Synthesis associated domain TP45_21080 SM01126 TP45_21080 TP45_21085 SM01126 TP45_21085 TP45_21090 SM01126 TP45_21090 TP45_21095 SM00448 cheY-homologous receiver domain TP45_21120 SM00829 Enoylreductase TP45_21125 SM00563 Phosphate acyltransferases TP45_21135 SM00354 helix_turn _helix lactose operon repressor TP45_21160 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TP45_21195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_21195 SM00388 His Kinase A (phosphoacceptor) domain TP45_21210 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TP45_21210 SM01232 TP45_21210 TP45_21245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TP45_21245 SM00091 PAS domain TP45_21300 SM00347 helix_turn_helix multiple antibiotic resistance protein TP45_21350 SM00155 Phospholipase D. Active site motifs. TP45_21390 SM01126 TP45_21390 TP45_21405 SM01126 TP45_21405 TP45_21435 SM00822 TP45_21435 TP45_21480 SM00237 Domains in Na-Ca exchangers and integrin-beta4 TP45_21480 SM00736 Dystroglycan-type cadherin-like domains. TP45_21480 SM00869 Autotransporter beta-domain TP45_21510 SM00382 ATPases associated with a variety of cellular activities TP45_21615 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TP45_21640 SM00014 Acid phosphatase homologues TP45_21705 SM00857 Resolvase, N terminal domain TP45_21710 SM01126 TP45_21710 TP45_21745 SM00857 Resolvase, N terminal domain