locus-tag class description CLM98_00010 IPR004711 Benzoate transporter CLM98_00015 IPR029016 GAF-like domain superfamily CLM98_00015 IPR013515 Phytochrome, central region CLM98_00015 IPR001294 Phytochrome CLM98_00015 IPR016132 Phytochrome chromophore attachment domain CLM98_00015 IPR003018 GAF domain CLM98_00015 IPR013654 PAS fold-2 CLM98_00015 IPR000014 PAS domain CLM98_00015 IPR035965 PAS domain superfamily CLM98_00020 IPR016053 Haem oxygenase-like CLM98_00020 IPR016084 Haem oxygenase-like, multi-helical CLM98_00030 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CLM98_00030 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_00030 IPR011013 Galactose mutarotase-like domain superfamily CLM98_00030 IPR025532 Glucose-6-phosphate 1-epimerase CLM98_00040 IPR032710 NTF2-like domain superfamily CLM98_00040 IPR023006 Uncharacterised protein family UPF0225 CLM98_00040 IPR004027 SEC-C motif CLM98_00045 IPR002781 Transmembrane protein TauE-like CLM98_00065 IPR020602 GTP cyclohydrolase I domain CLM98_00065 IPR018234 GTP cyclohydrolase I, conserved site CLM98_00065 IPR001474 GTP cyclohydrolase I CLM98_00075 IPR012451 Protein of unknown function DUF1656 CLM98_00080 IPR006143 RND efflux pump, membrane fusion protein CLM98_00080 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_00085 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_00085 IPR003423 Outer membrane efflux protein CLM98_00090 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CLM98_00095 IPR005829 Sugar transporter, conserved site CLM98_00095 IPR004736 MFS transporter, metabolite:H symporter CLM98_00095 IPR036259 MFS transporter superfamily CLM98_00095 IPR005828 Major facilitator, sugar transporter-like CLM98_00095 IPR020846 Major facilitator superfamily domain CLM98_00105 IPR001736 Phospholipase D/Transphosphatidylase CLM98_00105 IPR025202 Phospholipase D-like domain CLM98_00105 IPR027379 Cardiolipin synthase N-terminal CLM98_00105 IPR030874 Cardiolipin synthase, Firmicutes-type CLM98_00105 IPR022924 Cardiolipin synthase CLM98_00125 IPR013321 Arc-type ribbon-helix-helix CLM98_00125 IPR010985 Ribbon-helix-helix CLM98_00130 IPR002716 PIN domain CLM98_00130 IPR029060 PIN-like domain superfamily CLM98_00130 IPR022907 VapC family CLM98_00155 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_00155 IPR006225 Pseudouridine synthase, RluC/RluD CLM98_00155 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_00155 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_00155 IPR002942 RNA-binding S4 domain CLM98_00185 IPR011054 Rudiment single hybrid motif CLM98_00185 IPR016185 Pre-ATP-grasp domain superfamily CLM98_00185 IPR011761 ATP-grasp fold CLM98_00185 IPR005482 Biotin carboxylase, C-terminal CLM98_00185 IPR011764 Biotin carboxylation domain CLM98_00185 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_00185 IPR005481 Biotin carboxylase-like, N-terminal domain CLM98_00190 IPR036928 Amidase signature (AS) superfamily CLM98_00190 IPR023631 Amidase signature domain CLM98_00190 IPR014085 Allophanate hydrolase CLM98_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00220 IPR006344 RecBCD enzyme subunit RecD CLM98_00220 IPR027785 UvrD-like helicase C-terminal domain CLM98_00225 IPR000212 DNA helicase, UvrD/REP type CLM98_00225 IPR034739 UvrD/AddA helicase, N-terminal CLM98_00225 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_00225 IPR011335 Restriction endonuclease type II-like CLM98_00225 IPR004586 RecBCD enzyme subunit RecB CLM98_00225 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CLM98_00225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00225 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLM98_00225 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_00230 IPR006697 RecBCD enzyme subunit RecC CLM98_00230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00230 IPR011335 Restriction endonuclease type II-like CLM98_00230 IPR041500 RecC, C-terminal CLM98_00230 IPR013986 DExx box DNA helicase domain superfamily CLM98_00245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00245 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CLM98_00245 IPR017871 ABC transporter, conserved site CLM98_00245 IPR003439 ABC transporter-like CLM98_00245 IPR003593 AAA+ ATPase domain CLM98_00250 IPR030802 ABC transporter permease MalE CLM98_00250 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CLM98_00255 IPR003399 Mce/MlaD CLM98_00255 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CLM98_00260 IPR042245 Tgt2/MlaC superfamily CLM98_00260 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CLM98_00270 IPR007428 MlaA lipoprotein CLM98_00280 IPR029759 Glutathione peroxidase active site CLM98_00280 IPR029760 Glutathione peroxidase conserved site CLM98_00280 IPR036249 Thioredoxin-like superfamily CLM98_00280 IPR000889 Glutathione peroxidase CLM98_00280 IPR033674 Thioredoxin/glutathione peroxidase BtuE CLM98_00290 IPR003798 DNA recombination RmuC CLM98_00295 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CLM98_00295 IPR020843 Polyketide synthase, enoylreductase domain CLM98_00295 IPR036291 NAD(P)-binding domain superfamily CLM98_00295 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_00295 IPR011032 GroES-like superfamily CLM98_00295 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_00295 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CLM98_00300 IPR005119 LysR, substrate-binding CLM98_00300 IPR000847 Transcription regulator HTH, LysR CLM98_00300 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_00300 IPR036390 Winged helix DNA-binding domain superfamily CLM98_00315 IPR004046 Glutathione S-transferase, C-terminal CLM98_00315 IPR036249 Thioredoxin-like superfamily CLM98_00315 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_00315 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_00315 IPR004045 Glutathione S-transferase, N-terminal CLM98_00325 IPR002293 Amino acid/polyamine transporter I CLM98_00325 IPR004758 Amino acid transporter CLM98_00330 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_00330 IPR041371 Glycosyl hydrolase family 92 N-terminal domain CLM98_00330 IPR005887 Alpha-1,2-mannosidase, putative CLM98_00330 IPR012939 Glycosyl hydrolase family 92 CLM98_00330 IPR008928 Six-hairpin glycosidase superfamily CLM98_00340 IPR024399 Protein of unknown function DUF2628 CLM98_00345 IPR039435 Diguanylate cyclase DosC, globin sensor domain CLM98_00345 IPR000160 GGDEF domain CLM98_00345 IPR009050 Globin-like superfamily CLM98_00345 IPR012292 Globin/Protoglobin CLM98_00345 IPR029787 Nucleotide cyclase CLM98_00350 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CLM98_00350 IPR041522 CdaR, GGDEF-like domain CLM98_00350 IPR008599 Putative sugar diacid recognition CLM98_00350 IPR025736 PucR C-terminal helix-turn-helix domain CLM98_00355 IPR004381 Glycerate kinase CLM98_00355 IPR036129 Glycerate kinase superfamily CLM98_00355 IPR018197 Glycerate kinase, restriction-enzyme-like fold CLM98_00355 IPR018193 Glycerate kinase, flavodoxin-like fold CLM98_00360 IPR036259 MFS transporter superfamily CLM98_00360 IPR011701 Major facilitator superfamily CLM98_00360 IPR020846 Major facilitator superfamily domain CLM98_00375 IPR036974 PUA domain superfamily CLM98_00375 IPR041532 RlmI, PUA-like domain CLM98_00375 IPR023542 rRNA large subunit methyltransferase I CLM98_00375 IPR002478 PUA domain CLM98_00375 IPR015947 PUA-like superfamily CLM98_00375 IPR019614 S-adenosylmethionine-dependent methyltransferase CLM98_00375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_00385 IPR005496 Integral membrane protein TerC CLM98_00385 IPR022369 Integral membrane protein TerC, riboswitch-linked CLM98_00395 IPR022764 Peptidase S54, rhomboid domain CLM98_00395 IPR035952 Rhomboid-like superfamily CLM98_00400 IPR030395 Glycerophosphodiester phosphodiesterase domain CLM98_00400 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CLM98_00410 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_00410 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLM98_00410 IPR018296 Acid phosphatase, class A, bacterial, conserved site CLM98_00410 IPR001011 Acid phosphatase, class A, bacterial CLM98_00415 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLM98_00415 IPR006073 GTP binding domain CLM98_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00415 IPR031168 TrmE-type guanine nucleotide-binding domain CLM98_00415 IPR018948 GTP-binding protein TrmE, N-terminal CLM98_00415 IPR025867 MnmE, helical domain CLM98_00415 IPR004520 tRNA modification GTPase MnmE CLM98_00415 IPR027368 tRNA modification GTPase MnmE domain 2 CLM98_00415 IPR005225 Small GTP-binding protein domain CLM98_00420 IPR026402 Chitooligosaccharide deacetylase NodB CLM98_00420 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_00420 IPR002509 NodB homology domain CLM98_00425 IPR019998 Membrane insertase YidC CLM98_00425 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLM98_00425 IPR038221 YidC, periplasmic domain superfamily CLM98_00425 IPR038210 Membrane insertase YidC, periplasmic domain CLM98_00425 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CLM98_00425 IPR028053 Membrane insertase YidC, N-terminal CLM98_00430 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_00430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_00430 IPR000100 Ribonuclease P CLM98_00430 IPR020539 Ribonuclease P, conserved site CLM98_00435 IPR020939 Ribosomal protein L34, conserved site CLM98_00435 IPR000271 Ribosomal protein L34 CLM98_00445 IPR020591 Chromosomal replication control, initiator DnaA-like CLM98_00445 IPR010921 Trp repressor/replication initiator CLM98_00445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00445 IPR038454 DnaA, N-terminal domain superfamily CLM98_00445 IPR024633 DnaA N-terminal domain CLM98_00445 IPR013159 Chromosomal replication initiator, DnaA C-terminal CLM98_00445 IPR013317 Chromosomal replication initiator protein DnaA CLM98_00445 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CLM98_00445 IPR003593 AAA+ ATPase domain CLM98_00445 IPR001957 Chromosomal replication control, initiator DnaA CLM98_00450 IPR022637 DNA polymerase III, beta sliding clamp, central CLM98_00450 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CLM98_00450 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CLM98_00450 IPR001001 DNA polymerase III, beta sliding clamp CLM98_00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00455 IPR001238 DNA-binding, RecF CLM98_00455 IPR018078 DNA-binding, RecF, conserved site CLM98_00455 IPR042174 DNA-binding RecF, domain 2 CLM98_00455 IPR003395 RecF/RecN/SMC, N-terminal CLM98_00460 IPR034160 DNA gyrase subunit B, TOPRIM domain CLM98_00460 IPR006171 TOPRIM domain CLM98_00460 IPR018522 DNA topoisomerase, type IIA, conserved site CLM98_00460 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLM98_00460 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_00460 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLM98_00460 IPR002288 DNA gyrase B subunit, C-terminal CLM98_00460 IPR011557 DNA gyrase, subunit B CLM98_00460 IPR041423 DNA gyrase subunit B insert domain CLM98_00460 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_00460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_00460 IPR001241 DNA topoisomerase, type IIA CLM98_00460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_00460 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CLM98_00470 IPR001915 Peptidase M48 CLM98_00480 IPR006260 TonB/TolA, C-terminal CLM98_00480 IPR037682 TonB, C-terminal CLM98_00485 IPR002898 MotA/TolQ/ExbB proton channel CLM98_00490 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_00495 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_00500 IPR036130 Pyridoxine 5'-phosphate synthase CLM98_00500 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CLM98_00500 IPR013785 Aldolase-type TIM barrel CLM98_00510 IPR022924 Cardiolipin synthase CLM98_00510 IPR025202 Phospholipase D-like domain CLM98_00510 IPR001736 Phospholipase D/Transphosphatidylase CLM98_00510 IPR030874 Cardiolipin synthase, Firmicutes-type CLM98_00510 IPR027379 Cardiolipin synthase N-terminal CLM98_00525 IPR013785 Aldolase-type TIM barrel CLM98_00525 IPR006638 Elp3/MiaB/NifB CLM98_00525 IPR040086 Protein MJ0683-like CLM98_00525 IPR007197 Radical SAM CLM98_00535 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CLM98_00535 IPR042117 OMPP1/FadL/TodX superfamily CLM98_00550 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLM98_00550 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_00550 IPR023756 Glyoxylate/hydroxypyruvate reductase B CLM98_00550 IPR036291 NAD(P)-binding domain superfamily CLM98_00550 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_00555 IPR036034 PDZ superfamily CLM98_00555 IPR004447 C-terminal-processing peptidase S41A CLM98_00555 IPR005151 Tail specific protease CLM98_00555 IPR029045 ClpP/crotonase-like domain superfamily CLM98_00555 IPR001478 PDZ domain CLM98_00560 IPR016047 Peptidase M23 CLM98_00560 IPR011055 Duplicated hybrid motif CLM98_00570 IPR007484 Peptidase M28 CLM98_00580 IPR017853 Glycoside hydrolase superfamily CLM98_00580 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00580 IPR001547 Glycoside hydrolase, family 5 CLM98_00590 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00590 IPR001547 Glycoside hydrolase, family 5 CLM98_00590 IPR017853 Glycoside hydrolase superfamily CLM98_00600 IPR017853 Glycoside hydrolase superfamily CLM98_00600 IPR001547 Glycoside hydrolase, family 5 CLM98_00600 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00610 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_00610 IPR036291 NAD(P)-binding domain superfamily CLM98_00610 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_00610 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_00610 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_00610 IPR020843 Polyketide synthase, enoylreductase domain CLM98_00610 IPR011032 GroES-like superfamily CLM98_00615 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_00615 IPR028261 Dihydroprymidine dehydrogenase domain II CLM98_00615 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_00615 IPR023753 FAD/NAD(P)-binding domain CLM98_00615 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CLM98_00615 IPR009051 Alpha-helical ferredoxin CLM98_00620 IPR006982 Glutamate synthase, central-N CLM98_00620 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CLM98_00620 IPR002489 Glutamate synthase, alpha subunit, C-terminal CLM98_00620 IPR002932 Glutamate synthase domain CLM98_00620 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00620 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00620 IPR013785 Aldolase-type TIM barrel CLM98_00650 IPR036390 Winged helix DNA-binding domain superfamily CLM98_00650 IPR000847 Transcription regulator HTH, LysR CLM98_00650 IPR005119 LysR, substrate-binding CLM98_00650 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_00670 IPR003362 Bacterial sugar transferase CLM98_00670 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLM98_00670 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CLM98_00675 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CLM98_00675 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CLM98_00685 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase CLM98_00685 IPR028082 Periplasmic binding protein-like I CLM98_00685 IPR004629 Glycosyl transferase WecB/TagA/CpsF CLM98_00690 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLM98_00690 IPR001296 Glycosyl transferase, family 1 CLM98_00710 IPR001962 Asparagine synthase CLM98_00710 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_00710 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00710 IPR033738 Asparagine synthase, N-terminal domain CLM98_00710 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00725 IPR005886 UDP-glucose 4-epimerase CLM98_00725 IPR016040 NAD(P)-binding domain CLM98_00725 IPR036291 NAD(P)-binding domain superfamily CLM98_00740 IPR017871 ABC transporter, conserved site CLM98_00740 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_00740 IPR011917 ABC transporter, lipid A export, MsbA CLM98_00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00740 IPR003593 AAA+ ATPase domain CLM98_00740 IPR011527 ABC transporter type 1, transmembrane domain CLM98_00740 IPR003439 ABC transporter-like CLM98_00755 IPR001962 Asparagine synthase CLM98_00755 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00755 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00755 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_00755 IPR033738 Asparagine synthase, N-terminal domain CLM98_00775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00775 IPR000863 Sulfotransferase domain CLM98_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00865 IPR001650 Helicase, C-terminal CLM98_00865 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_00865 IPR011545 DEAD/DEAH box helicase domain CLM98_00865 IPR018973 DEAD/DEAH-box helicase, putative CLM98_00870 IPR005744 Hly-III CLM98_00870 IPR004254 AdipoR/Haemolysin-III-related CLM98_00890 IPR036291 NAD(P)-binding domain superfamily CLM98_00890 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_00890 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_00895 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_00895 IPR036291 NAD(P)-binding domain superfamily CLM98_00895 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_00900 IPR036390 Winged helix DNA-binding domain superfamily CLM98_00900 IPR005119 LysR, substrate-binding CLM98_00900 IPR000847 Transcription regulator HTH, LysR CLM98_00900 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_00920 IPR003680 Flavodoxin-like fold CLM98_00920 IPR029039 Flavoprotein-like superfamily CLM98_00985 IPR036629 YjbJ superfamily CLM98_00985 IPR008462 CsbD-like domain CLM98_01005 IPR023612 Peptidase M4 CLM98_01005 IPR032475 Protealysin, N-terminal propeptide CLM98_01005 IPR001570 Peptidase M4, C-terminal CLM98_01005 IPR013856 Peptidase M4 domain CLM98_01005 IPR027268 Peptidase M4/M1, CTD superfamily CLM98_01015 IPR000086 NUDIX hydrolase domain CLM98_01015 IPR020084 NUDIX hydrolase, conserved site CLM98_01015 IPR036412 HAD-like superfamily CLM98_01015 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_01015 IPR023214 HAD superfamily CLM98_01015 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLM98_01015 IPR020476 NUDIX hydrolase CLM98_01035 IPR013766 Thioredoxin domain CLM98_01035 IPR017937 Thioredoxin, conserved site CLM98_01035 IPR005746 Thioredoxin CLM98_01035 IPR036249 Thioredoxin-like superfamily CLM98_01045 IPR004736 MFS transporter, metabolite:H symporter CLM98_01045 IPR005828 Major facilitator, sugar transporter-like CLM98_01045 IPR036259 MFS transporter superfamily CLM98_01045 IPR005829 Sugar transporter, conserved site CLM98_01045 IPR036292 Proline/betaine transporter ProP, C-terminal CLM98_01045 IPR015041 Osmosensory transporter coiled coil CLM98_01045 IPR020846 Major facilitator superfamily domain CLM98_01085 IPR011703 ATPase, AAA-3 CLM98_01085 IPR041628 ChlI/MoxR, AAA lid domain CLM98_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01115 IPR028343 Fructose-1,6-bisphosphatase CLM98_01115 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CLM98_01115 IPR000146 Fructose-1,6-bisphosphatase class 1 CLM98_01120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_01120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_01120 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_01120 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLM98_01120 IPR000796 Aspartate/other aminotransferase CLM98_01120 IPR004839 Aminotransferase, class I/classII CLM98_01125 IPR039426 Vitamin B12 transporter BtuB-like CLM98_01125 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_01125 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_01125 IPR012910 TonB-dependent receptor, plug domain CLM98_01125 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_01125 IPR010105 TonB-dependent siderophore receptor CLM98_01135 IPR019780 Germin, manganese binding site CLM98_01135 IPR013096 Cupin 2, conserved barrel CLM98_01135 IPR014710 RmlC-like jelly roll fold CLM98_01135 IPR011051 RmlC-like cupin domain superfamily CLM98_01140 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_01140 IPR015590 Aldehyde dehydrogenase domain CLM98_01140 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_01140 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_01140 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_01140 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_01165 IPR000262 FMN-dependent dehydrogenase CLM98_01165 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CLM98_01165 IPR013785 Aldolase-type TIM barrel CLM98_01165 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CLM98_01165 IPR020920 L-lactate dehydrogenase, bacterial CLM98_01165 IPR037396 FMN hydroxy acid dehydrogenase domain CLM98_01175 IPR001466 Beta-lactamase-related CLM98_01175 IPR012338 Beta-lactamase/transpeptidase-like CLM98_01180 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_01180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_01185 IPR000792 Transcription regulator LuxR, C-terminal CLM98_01185 IPR001789 Signal transduction response regulator, receiver domain CLM98_01185 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_01185 IPR011006 CheY-like superfamily CLM98_01185 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_01205 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_01205 IPR039420 Transcriptional regulatory protein WalR-like CLM98_01205 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_01205 IPR040970 CadC C-terminal domain 1 CLM98_01205 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_01205 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_01210 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative CLM98_01210 IPR024906 Enoyl reductase FAD binding domain CLM98_01210 IPR010758 Trans-2-enoyl-CoA reductase CLM98_01220 IPR011611 Carbohydrate kinase PfkB CLM98_01220 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_01220 IPR029056 Ribokinase-like CLM98_01220 IPR002139 Ribokinase/fructokinase CLM98_01285 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01285 IPR013783 Immunoglobulin-like fold CLM98_01285 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase CLM98_01285 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S CLM98_01285 IPR013780 Glycosyl hydrolase, all-beta CLM98_01285 IPR017853 Glycoside hydrolase superfamily CLM98_01290 IPR012810 Trehalose synthase/alpha-amylase, N-terminal CLM98_01290 IPR032091 Maltogenic Amylase, C-terminal CLM98_01290 IPR017853 Glycoside hydrolase superfamily CLM98_01290 IPR013780 Glycosyl hydrolase, all-beta CLM98_01290 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01295 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01295 IPR014756 Immunoglobulin E-set CLM98_01295 IPR013783 Immunoglobulin-like fold CLM98_01295 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CLM98_01295 IPR017853 Glycoside hydrolase superfamily CLM98_01295 IPR013780 Glycosyl hydrolase, all-beta CLM98_01295 IPR037439 1,4-alpha-glucan-branching enzyme CLM98_01295 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CLM98_01295 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_01305 IPR023210 NADP-dependent oxidoreductase domain CLM98_01305 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_01310 IPR002018 Carboxylesterase, type B CLM98_01310 IPR029058 Alpha/Beta hydrolase fold CLM98_01310 IPR019826 Carboxylesterase type B, active site CLM98_01315 IPR036514 SGNH hydrolase superfamily CLM98_01315 IPR029058 Alpha/Beta hydrolase fold CLM98_01315 IPR013094 Alpha/beta hydrolase fold-3 CLM98_01315 IPR013830 SGNH hydrolase-type esterase domain CLM98_01325 IPR018389 TRAP transporter solute receptor DctP/TeaA CLM98_01325 IPR004682 TRAP transporter solute receptor, DctP family CLM98_01325 IPR038404 TRAP transporter solute receptor DctP superfamily CLM98_01335 IPR004681 TRAP transporter large membrane protein DctM CLM98_01335 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLM98_01340 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLM98_01340 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CLM98_01340 IPR006710 Glycoside hydrolase, family 43 CLM98_01340 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_01345 IPR023588 Transcription regulator HTH, PurR CLM98_01345 IPR000843 LacI-type HTH domain CLM98_01345 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_01345 IPR028082 Periplasmic binding protein-like I CLM98_01355 IPR011051 RmlC-like cupin domain superfamily CLM98_01355 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal CLM98_01355 IPR007045 5-keto 4-deoxyuronate isomerase CLM98_01355 IPR021120 KduI/IolB isomerase CLM98_01355 IPR014710 RmlC-like jelly roll fold CLM98_01360 IPR036291 NAD(P)-binding domain superfamily CLM98_01360 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_01360 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_01360 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CLM98_01370 IPR001087 GDSL lipase/esterase CLM98_01370 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like CLM98_01370 IPR036514 SGNH hydrolase superfamily CLM98_01385 IPR019774 Aromatic amino acid hydroxylase, C-terminal CLM98_01385 IPR005960 Phenylalanine-4-hydroxylase, monomeric form CLM98_01385 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site CLM98_01385 IPR001273 Aromatic amino acid hydroxylase CLM98_01385 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily CLM98_01385 IPR036951 Aromatic amino acid hydroxylase superfamily CLM98_01390 IPR011008 Dimeric alpha-beta barrel CLM98_01390 IPR036390 Winged helix DNA-binding domain superfamily CLM98_01390 IPR000485 AsnC-type HTH domain CLM98_01390 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLM98_01390 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_01390 IPR019888 Transcription regulator AsnC-type CLM98_01390 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLM98_01395 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_01395 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_01395 IPR010105 TonB-dependent siderophore receptor CLM98_01395 IPR012910 TonB-dependent receptor, plug domain CLM98_01395 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_01395 IPR039423 TonB-dependent receptor-like CLM98_01395 IPR011662 Secretin/TonB, short N-terminal domain CLM98_01395 IPR010917 TonB-dependent receptor, conserved site CLM98_01400 IPR001423 Lysophospholipase patatin, conserved site CLM98_01400 IPR002641 Patatin-like phospholipase domain CLM98_01400 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_01410 IPR017871 ABC transporter, conserved site CLM98_01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01410 IPR003593 AAA+ ATPase domain CLM98_01410 IPR003439 ABC transporter-like CLM98_01425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01425 IPR017871 ABC transporter, conserved site CLM98_01425 IPR003439 ABC transporter-like CLM98_01425 IPR003593 AAA+ ATPase domain CLM98_01430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_01430 IPR035906 MetI-like superfamily CLM98_01440 IPR017806 Ergothioneine biosynthesis protein EgtB CLM98_01440 IPR042095 Sulfatase-modifying factor enzyme superfamily CLM98_01440 IPR032890 Hercynine oxygenase, Actinobacteria CLM98_01440 IPR005532 Sulfatase-modifying factor enzyme CLM98_01440 IPR016187 C-type lectin fold CLM98_01440 IPR024775 DinB-like domain CLM98_01440 IPR034660 DinB/YfiT-like putative metalloenzymes CLM98_01460 IPR017507 Transcription regulator, HipB-like CLM98_01460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_01460 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_01485 IPR002744 MIP18 family-like CLM98_01485 IPR019591 Mrp/NBP35 ATP-binding protein CLM98_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01485 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLM98_01485 IPR034904 Fe-S cluster assembly domain superfamily CLM98_01485 IPR000808 Mrp, conserved site CLM98_01490 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_01490 IPR029033 Histidine phosphatase superfamily CLM98_01500 IPR025202 Phospholipase D-like domain CLM98_01500 IPR001736 Phospholipase D/Transphosphatidylase CLM98_01505 IPR029069 HotDog domain superfamily CLM98_01505 IPR006683 Thioesterase domain CLM98_01505 IPR003736 Phenylacetic acid degradation-related domain CLM98_01535 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_01535 IPR036291 NAD(P)-binding domain superfamily CLM98_01535 IPR020843 Polyketide synthase, enoylreductase domain CLM98_01535 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_01535 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_01535 IPR011032 GroES-like superfamily CLM98_01545 IPR003824 Undecaprenyl-diphosphatase UppP CLM98_01555 IPR008147 Glutamine synthetase, beta-Grasp domain CLM98_01555 IPR004809 Glutamine synthetase type I CLM98_01555 IPR027303 Glutamine synthetase, glycine-rich site CLM98_01555 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_01555 IPR036651 Glutamine synthetase, N-terminal domain superfamily CLM98_01555 IPR001637 Glutamine synthetase class-I, adenylation site CLM98_01555 IPR027302 Glutamine synthetase, N-terminal conserved site CLM98_01555 IPR008146 Glutamine synthetase, catalytic domain CLM98_01560 IPR017918 Nitrogen regulatory protein PII, conserved site CLM98_01560 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_01560 IPR002187 Nitrogen regulatory protein PII CLM98_01560 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_01560 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLM98_01565 IPR024041 Ammonium transporter AmtB-like domain CLM98_01565 IPR018047 Ammonium transporter, conserved site CLM98_01565 IPR001905 Ammonium transporter CLM98_01565 IPR029020 Ammonium/urea transporter CLM98_01570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_01570 IPR013767 PAS fold CLM98_01570 IPR035965 PAS domain superfamily CLM98_01570 IPR000014 PAS domain CLM98_01570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_01570 IPR005467 Histidine kinase domain CLM98_01570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_01570 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_01570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_01575 IPR001789 Signal transduction response regulator, receiver domain CLM98_01575 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_01575 IPR009057 Homeobox-like domain superfamily CLM98_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01575 IPR002197 DNA binding HTH domain, Fis-type CLM98_01575 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_01575 IPR010114 DNA-binding transcriptional regulator NtrC CLM98_01575 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_01575 IPR003593 AAA+ ATPase domain CLM98_01575 IPR011006 CheY-like superfamily CLM98_01575 IPR025944 Sigma-54 interaction domain, conserved site CLM98_01580 IPR001424 Superoxide dismutase, copper/zinc binding domain CLM98_01580 IPR018152 Superoxide dismutase, copper/zinc, binding site CLM98_01580 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CLM98_01580 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CLM98_01585 IPR018152 Superoxide dismutase, copper/zinc, binding site CLM98_01585 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CLM98_01585 IPR001424 Superoxide dismutase, copper/zinc binding domain CLM98_01585 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CLM98_01595 IPR022858 Metallothiol transferase FosB CLM98_01595 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_01595 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_01595 IPR037523 Vicinal oxygen chelate (VOC) domain CLM98_01605 IPR016039 Thiolase-like CLM98_01605 IPR002155 Thiolase CLM98_01605 IPR020610 Thiolase, active site CLM98_01605 IPR012806 Acetyl-CoA C-acyltransferase FadI CLM98_01605 IPR020613 Thiolase, conserved site CLM98_01605 IPR020616 Thiolase, N-terminal CLM98_01605 IPR020617 Thiolase, C-terminal CLM98_01640 IPR001763 Rhodanese-like domain CLM98_01640 IPR036873 Rhodanese-like domain superfamily CLM98_01645 IPR003708 Bacterial protein export chaperone SecB CLM98_01645 IPR035958 SecB-like superfamily CLM98_01650 IPR036291 NAD(P)-binding domain superfamily CLM98_01650 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CLM98_01650 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CLM98_01650 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CLM98_01650 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_01650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_01665 IPR000399 TPP-binding enzyme, conserved site CLM98_01665 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLM98_01665 IPR012000 Thiamine pyrophosphate enzyme, central domain CLM98_01665 IPR029061 Thiamin diphosphate-binding fold CLM98_01665 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLM98_01665 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLM98_01670 IPR012292 Globin/Protoglobin CLM98_01670 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_01670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_01670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_01670 IPR005467 Histidine kinase domain CLM98_01670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_01670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_01670 IPR039379 Protoglobin, globin sensor domain CLM98_01670 IPR009050 Globin-like superfamily CLM98_01675 IPR002197 DNA binding HTH domain, Fis-type CLM98_01675 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_01675 IPR003593 AAA+ ATPase domain CLM98_01675 IPR011006 CheY-like superfamily CLM98_01675 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_01675 IPR010114 DNA-binding transcriptional regulator NtrC CLM98_01675 IPR009057 Homeobox-like domain superfamily CLM98_01675 IPR001789 Signal transduction response regulator, receiver domain CLM98_01675 IPR025944 Sigma-54 interaction domain, conserved site CLM98_01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01675 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_01690 IPR020846 Major facilitator superfamily domain CLM98_01690 IPR036259 MFS transporter superfamily CLM98_01690 IPR011701 Major facilitator superfamily CLM98_01695 IPR029028 Alpha/beta knot methyltransferases CLM98_01695 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_01695 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CLM98_01695 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_01710 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLM98_01710 IPR016039 Thiolase-like CLM98_01710 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_01710 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLM98_01715 IPR003812 Fido domain CLM98_01715 IPR040198 Fido domain-containing protein CLM98_01715 IPR026287 Protein adenylyltransferase SoFic-like CLM98_01715 IPR025758 Fic/DOC N-terminal CLM98_01715 IPR036597 Fido-like domain superfamily CLM98_01720 IPR029058 Alpha/Beta hydrolase fold CLM98_01720 IPR000639 Epoxide hydrolase-like CLM98_01720 IPR000073 Alpha/beta hydrolase fold-1 CLM98_01725 IPR005358 Putative zinc- or iron-chelating domain containing protein CLM98_01730 IPR042099 AMP-dependent synthetase-like superfamily CLM98_01730 IPR000873 AMP-dependent synthetase/ligase CLM98_01730 IPR020845 AMP-binding, conserved site CLM98_01735 IPR036291 NAD(P)-binding domain superfamily CLM98_01735 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CLM98_01750 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLM98_01750 IPR011095 D-alanine--D-alanine ligase, C-terminal CLM98_01750 IPR005905 D-alanine--D-alanine ligase CLM98_01750 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLM98_01750 IPR011761 ATP-grasp fold CLM98_01750 IPR016185 Pre-ATP-grasp domain superfamily CLM98_01750 IPR013815 ATP-grasp fold, subdomain 1 CLM98_01765 IPR010232 Probable protein kinase UbiB CLM98_01765 IPR011009 Protein kinase-like domain superfamily CLM98_01765 IPR004147 UbiB domain CLM98_01775 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_01775 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_01775 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_01785 IPR000352 Peptide chain release factor class I CLM98_01795 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_01795 IPR000246 Peptidase T2, asparaginase 2 CLM98_01800 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_01800 IPR001567 Peptidase M3A/M3B catalytic domain CLM98_01805 IPR001279 Metallo-beta-lactamase CLM98_01805 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CLM98_01805 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_01825 IPR018062 HTH domain AraC-type, conserved site CLM98_01825 IPR018060 DNA binding HTH domain, AraC-type CLM98_01830 IPR038770 Sodium/solute symporter superfamily CLM98_01830 IPR006153 Cation/H+ exchanger CLM98_01835 IPR036390 Winged helix DNA-binding domain superfamily CLM98_01835 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_01835 IPR005119 LysR, substrate-binding CLM98_01835 IPR000847 Transcription regulator HTH, LysR CLM98_01840 IPR006252 Malate synthase A CLM98_01840 IPR001465 Malate synthase CLM98_01840 IPR019830 Malate synthase, conserved site CLM98_01840 IPR011076 Malate synthase-like superfamily CLM98_01845 IPR006254 Isocitrate lyase CLM98_01845 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLM98_01845 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_01845 IPR040442 Pyruvate kinase-like domain superfamily CLM98_01845 IPR039556 ICL/PEPM domain CLM98_01850 IPR029787 Nucleotide cyclase CLM98_01850 IPR012292 Globin/Protoglobin CLM98_01850 IPR009050 Globin-like superfamily CLM98_01850 IPR000160 GGDEF domain CLM98_01850 IPR039435 Diguanylate cyclase DosC, globin sensor domain CLM98_01870 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_01870 IPR029058 Alpha/Beta hydrolase fold CLM98_01870 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_01875 IPR001882 Biotin-binding site CLM98_01875 IPR011053 Single hybrid motif CLM98_01875 IPR005481 Biotin carboxylase-like, N-terminal domain CLM98_01875 IPR016185 Pre-ATP-grasp domain superfamily CLM98_01875 IPR011054 Rudiment single hybrid motif CLM98_01875 IPR011764 Biotin carboxylation domain CLM98_01875 IPR000089 Biotin/lipoyl attachment CLM98_01875 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_01875 IPR005482 Biotin carboxylase, C-terminal CLM98_01875 IPR011761 ATP-grasp fold CLM98_01880 IPR034733 Acetyl-CoA carboxylase CLM98_01880 IPR029045 ClpP/crotonase-like domain superfamily CLM98_01880 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CLM98_01880 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CLM98_01885 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_01885 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_01885 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_01885 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_01885 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_01885 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_01885 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01945 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLM98_01945 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLM98_01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01965 IPR030870 Cell division protein ZapE CLM98_01965 IPR005654 ATPase, AFG1-like CLM98_01970 IPR036390 Winged helix DNA-binding domain superfamily CLM98_01970 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_01970 IPR000835 MarR-type HTH domain CLM98_01975 IPR015946 K homology domain-like, alpha/beta CLM98_01975 IPR036102 OsmC/Ohr superfamily CLM98_01975 IPR003718 OsmC/Ohr family CLM98_01975 IPR019953 Organic hydroperoxide resistance protein famiy CLM98_02005 IPR011032 GroES-like superfamily CLM98_02005 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_02005 IPR041694 Oxidoreductase, N-terminal domain CLM98_02005 IPR036291 NAD(P)-binding domain superfamily CLM98_02005 IPR020843 Polyketide synthase, enoylreductase domain CLM98_02020 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_02020 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_02020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_02020 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLM98_02020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_02025 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_02025 IPR013784 Carbohydrate-binding-like fold CLM98_02025 IPR039426 Vitamin B12 transporter BtuB-like CLM98_02035 IPR011545 DEAD/DEAH box helicase domain CLM98_02035 IPR007502 Helicase-associated domain CLM98_02035 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_02035 IPR001650 Helicase, C-terminal CLM98_02035 IPR010225 ATP-dependent helicase HrpB CLM98_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02035 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CLM98_02045 IPR009921 Domain of unknown function DUF1456 CLM98_02050 IPR023419 Transthyretin, conserved site CLM98_02050 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily CLM98_02050 IPR023416 Transthyretin/hydroxyisourate hydrolase domain CLM98_02050 IPR023418 Transthyretin, thyroxine binding site CLM98_02050 IPR014306 Hydroxyisourate hydrolase CLM98_02055 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_02055 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain CLM98_02060 IPR019842 Uricase, conserved site CLM98_02060 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CLM98_02060 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CLM98_02060 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily CLM98_02060 IPR002042 Uricase CLM98_02075 IPR000192 Aminotransferase class V domain CLM98_02075 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_02075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_02075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_02075 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CLM98_02075 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLM98_02080 IPR002933 Peptidase M20 CLM98_02080 IPR011650 Peptidase M20, dimerisation domain CLM98_02080 IPR010158 Amidase, carbamoylase-type CLM98_02080 IPR036264 Bacterial exopeptidase dimerisation domain CLM98_02085 IPR000847 Transcription regulator HTH, LysR CLM98_02085 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02085 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02085 IPR005119 LysR, substrate-binding CLM98_02090 IPR020846 Major facilitator superfamily domain CLM98_02090 IPR036259 MFS transporter superfamily CLM98_02090 IPR011701 Major facilitator superfamily CLM98_02100 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_02105 IPR000120 Amidase CLM98_02105 IPR023631 Amidase signature domain CLM98_02105 IPR036928 Amidase signature (AS) superfamily CLM98_02105 IPR014087 1-carboxybiuret hydrolase, AtzE subunit CLM98_02110 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_02110 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CLM98_02110 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CLM98_02110 IPR036452 Ribonucleoside hydrolase-like CLM98_02110 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CLM98_02120 IPR026033 Azaguanine-like transporters CLM98_02120 IPR006043 Xanthine/uracil/vitamin C permease CLM98_02130 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_02130 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_02130 IPR012675 Beta-grasp domain superfamily CLM98_02130 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_02130 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_02130 IPR000951 Phthalate dioxygenase reductase CLM98_02130 IPR017938 Riboflavin synthase-like beta-barrel CLM98_02130 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_02135 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLM98_02135 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_02140 IPR000847 Transcription regulator HTH, LysR CLM98_02140 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02140 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02140 IPR005119 LysR, substrate-binding CLM98_02145 IPR032466 Metal-dependent hydrolase CLM98_02145 IPR001130 TatD family CLM98_02145 IPR024918 3'-5' ssDNA/RNA exonuclease TatD CLM98_02145 IPR018228 Deoxyribonuclease, TatD-related, conserved site CLM98_02160 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02160 IPR005119 LysR, substrate-binding CLM98_02160 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02160 IPR000847 Transcription regulator HTH, LysR CLM98_02165 IPR020846 Major facilitator superfamily domain CLM98_02165 IPR011701 Major facilitator superfamily CLM98_02165 IPR036259 MFS transporter superfamily CLM98_02180 IPR003000 Sirtuin family CLM98_02180 IPR026587 Sirtuin, class II CLM98_02180 IPR026590 Sirtuin family, catalytic core domain CLM98_02180 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLM98_02180 IPR026591 Sirtuin, catalytic core small domain superfamily CLM98_02185 IPR013785 Aldolase-type TIM barrel CLM98_02185 IPR023663 NADPH dehydrogenase CLM98_02185 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_02190 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_02190 IPR036291 NAD(P)-binding domain superfamily CLM98_02190 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_02190 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_02190 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_02190 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLM98_02190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_02200 IPR004810 Formyltetrahydrofolate deformylase CLM98_02200 IPR036477 Formyl transferase, N-terminal domain superfamily CLM98_02200 IPR002376 Formyl transferase, N-terminal CLM98_02200 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CLM98_02200 IPR002912 ACT domain CLM98_02205 IPR011006 CheY-like superfamily CLM98_02205 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_02205 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02205 IPR039420 Transcriptional regulatory protein WalR-like CLM98_02205 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_02205 IPR001789 Signal transduction response regulator, receiver domain CLM98_02210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_02210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_02210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_02210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_02210 IPR003660 HAMP domain CLM98_02210 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_02210 IPR005467 Histidine kinase domain CLM98_02215 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_02215 IPR006143 RND efflux pump, membrane fusion protein CLM98_02220 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_02220 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_02220 IPR001036 Acriflavin resistance protein CLM98_02225 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_02225 IPR003423 Outer membrane efflux protein CLM98_02235 IPR003171 Methylenetetrahydrofolate reductase CLM98_02235 IPR029041 FAD-linked oxidoreductase-like CLM98_02240 IPR003828 Epoxyqueuosine reductase QueH CLM98_02245 IPR005119 LysR, substrate-binding CLM98_02245 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CLM98_02245 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02245 IPR000847 Transcription regulator HTH, LysR CLM98_02245 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02250 IPR019912 FMN reductase, MsuE-like CLM98_02250 IPR005025 NADPH-dependent FMN reductase-like CLM98_02250 IPR029039 Flavoprotein-like superfamily CLM98_02260 IPR038071 UROD/MetE-like superfamily CLM98_02260 IPR006276 Cobalamin-independent methionine synthase CLM98_02260 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CLM98_02260 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CLM98_02265 IPR004684 2-keto-3-deoxygluconate permease CLM98_02265 IPR018395 2-keto-3-deoxygluconate permease, subgroup CLM98_02280 IPR008030 NmrA-like domain CLM98_02280 IPR036291 NAD(P)-binding domain superfamily CLM98_02285 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02285 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02285 IPR002577 Helix-turn-helix, HxlR type CLM98_02315 IPR010998 Integrase/recombinase, N-terminal CLM98_02315 IPR011946 Integrase, integron-type CLM98_02315 IPR002104 Integrase, catalytic domain CLM98_02315 IPR013762 Integrase-like, catalytic domain superfamily CLM98_02315 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_02315 IPR004107 Integrase, SAM-like, N-terminal CLM98_02320 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLM98_02320 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLM98_02320 IPR004404 Dihydroxy-acid dehydratase CLM98_02320 IPR037237 IlvD/EDD, N-terminal domain CLM98_02320 IPR042096 Dihydroxy-acid dehydratase, C-terminal CLM98_02335 IPR001451 Hexapeptide repeat CLM98_02335 IPR011004 Trimeric LpxA-like superfamily CLM98_02345 IPR005829 Sugar transporter, conserved site CLM98_02345 IPR036259 MFS transporter superfamily CLM98_02345 IPR020846 Major facilitator superfamily domain CLM98_02345 IPR011701 Major facilitator superfamily CLM98_02350 IPR021812 Protein of unknown function DUF3391 CLM98_02350 IPR006675 HDIG domain CLM98_02350 IPR037522 HD-GYP domain CLM98_02350 IPR003607 HD/PDEase domain CLM98_02350 IPR006674 HD domain CLM98_02365 IPR036291 NAD(P)-binding domain superfamily CLM98_02365 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_02370 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_02370 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_02370 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_02370 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_02370 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_02370 IPR015590 Aldehyde dehydrogenase domain CLM98_02380 IPR002938 FAD-binding domain CLM98_02380 IPR012733 4-hydroxybenzoate 3-monooxygenase CLM98_02380 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_02390 IPR000577 Carbohydrate kinase, FGGY CLM98_02390 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_02390 IPR005999 Glycerol kinase CLM98_02390 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_02390 IPR018483 Carbohydrate kinase, FGGY, conserved site CLM98_02395 IPR023271 Aquaporin-like CLM98_02395 IPR000425 Major intrinsic protein CLM98_02395 IPR022357 Major intrinsic protein, conserved site CLM98_02400 IPR006076 FAD dependent oxidoreductase CLM98_02400 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CLM98_02400 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_02400 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CLM98_02400 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CLM98_02405 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02405 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02405 IPR037171 NagB/RpiA transferase-like CLM98_02405 IPR001034 DeoR-type HTH domain CLM98_02405 IPR014036 DeoR C-terminal sensor domain CLM98_02405 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLM98_02415 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLM98_02415 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLM98_02415 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_02420 IPR037171 NagB/RpiA transferase-like CLM98_02420 IPR004165 Coenzyme A transferase family I CLM98_02425 IPR004165 Coenzyme A transferase family I CLM98_02425 IPR037171 NagB/RpiA transferase-like CLM98_02430 IPR020616 Thiolase, N-terminal CLM98_02430 IPR020613 Thiolase, conserved site CLM98_02430 IPR020617 Thiolase, C-terminal CLM98_02430 IPR020610 Thiolase, active site CLM98_02430 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_02430 IPR016039 Thiolase-like CLM98_02430 IPR002155 Thiolase CLM98_02430 IPR012793 Beta-ketoadipyl CoA thiolase CLM98_02435 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit CLM98_02435 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal CLM98_02435 IPR015889 Intradiol ring-cleavage dioxygenase, core CLM98_02435 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CLM98_02440 IPR015889 Intradiol ring-cleavage dioxygenase, core CLM98_02440 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit CLM98_02440 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CLM98_02445 IPR020557 Fumarate lyase, conserved site CLM98_02445 IPR022761 Fumarate lyase, N-terminal CLM98_02445 IPR024083 Fumarase/histidase, N-terminal CLM98_02445 IPR019468 Adenylosuccinate lyase C-terminal CLM98_02445 IPR008948 L-Aspartase-like CLM98_02445 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase CLM98_02445 IPR000362 Fumarate lyase family CLM98_02450 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02450 IPR029058 Alpha/Beta hydrolase fold CLM98_02450 IPR026968 3-oxoadipate enol-lactonase 1/2 CLM98_02450 IPR022742 Serine aminopeptidase, S33 CLM98_02455 IPR012788 4-carboxymuconolactone decarboxylase CLM98_02455 IPR003779 Carboxymuconolactone decarboxylase-like CLM98_02455 IPR029032 AhpD-like CLM98_02465 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02465 IPR005471 Transcription regulator IclR, N-terminal CLM98_02465 IPR014757 Transcription regulator IclR, C-terminal CLM98_02465 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR CLM98_02465 IPR029016 GAF-like domain superfamily CLM98_02465 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02475 IPR013094 Alpha/beta hydrolase fold-3 CLM98_02475 IPR029058 Alpha/Beta hydrolase fold CLM98_02480 IPR019619 Protein of unknown function DUF2490 CLM98_02485 IPR026904 GidA associated domain 3 CLM98_02485 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_02485 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CLM98_02485 IPR020595 MnmG-related, conserved site CLM98_02485 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CLM98_02495 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_02495 IPR005789 Threonine dehydratase, catabolic CLM98_02495 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLM98_02495 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_02515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_02515 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CLM98_02515 IPR041698 Methyltransferase domain 25 CLM98_02520 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_02520 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_02520 IPR036291 NAD(P)-binding domain superfamily CLM98_02525 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02525 IPR029058 Alpha/Beta hydrolase fold CLM98_02525 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CLM98_02535 IPR004839 Aminotransferase, class I/classII CLM98_02535 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CLM98_02535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_02535 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_02535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_02535 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CLM98_02540 IPR024177 Biotin synthase CLM98_02540 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CLM98_02540 IPR010722 Biotin and thiamin synthesis-associated domain CLM98_02540 IPR006638 Elp3/MiaB/NifB CLM98_02540 IPR013785 Aldolase-type TIM barrel CLM98_02540 IPR007197 Radical SAM CLM98_02545 IPR000836 Phosphoribosyltransferase domain CLM98_02545 IPR005222 Competence protein ComF CLM98_02545 IPR029057 Phosphoribosyltransferase-like CLM98_02550 IPR000537 UbiA prenyltransferase family CLM98_02550 IPR030470 UbiA prenyltransferase conserved site CLM98_02550 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CLM98_02550 IPR039653 Prenyltransferase CLM98_02575 IPR008718 NolX CLM98_02615 IPR006305 Flagellar biosynthesis protein FliQ CLM98_02615 IPR002191 Bacterial export protein family 3 CLM98_02620 IPR005838 Type III secretion system inner membrane P protein CLM98_02620 IPR005773 Yop virulence translocation protein R CLM98_02635 IPR001712 Type III secretion system FHIPEP CLM98_02635 IPR042194 FHIPEP, domain 1 CLM98_02635 IPR042193 FHIPEP, domain 3 CLM98_02635 IPR042196 FHIPEP, domain 4 CLM98_02635 IPR025505 FHIPEP conserved site CLM98_02640 IPR029025 Type III secretion system substrate exporter, C-terminal CLM98_02640 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CLM98_02640 IPR006135 Type III secretion system substrate exporter CLM98_02655 IPR006182 Secretory protein YscJ/FliF CLM98_02655 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CLM98_02670 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CLM98_02670 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_02670 IPR003593 AAA+ ATPase domain CLM98_02670 IPR005714 ATPase, type III secretion system, FliI/YscN CLM98_02670 IPR013380 ATPase, type III secretion system, H+-transporting CLM98_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02670 IPR040627 T3SS EscN ATPase, C-terminal CLM98_02670 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_02680 IPR002010 Type III secretion system inner membrane R protein CLM98_02680 IPR006304 Type III secretion protein SpaR/YscT CLM98_02695 IPR008258 Transglycosylase SLT domain 1 CLM98_02695 IPR023346 Lysozyme-like domain superfamily CLM98_02710 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLM98_02710 IPR006686 Mechanosensitive ion channel MscS, conserved site CLM98_02710 IPR006685 Mechanosensitive ion channel MscS CLM98_02710 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CLM98_02710 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLM98_02710 IPR010920 LSM domain superfamily CLM98_02710 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLM98_02710 IPR024393 Mechanosensitive ion channel MscS, porin domain CLM98_02715 IPR020881 Phosphoglycerol transferase I CLM98_02715 IPR000917 Sulfatase, N-terminal CLM98_02715 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLM98_02725 IPR000719 Protein kinase domain CLM98_02725 IPR004147 UbiB domain CLM98_02725 IPR011009 Protein kinase-like domain superfamily CLM98_02730 IPR008526 Inner membrane protein YedI CLM98_02735 IPR029787 Nucleotide cyclase CLM98_02735 IPR001789 Signal transduction response regulator, receiver domain CLM98_02735 IPR011006 CheY-like superfamily CLM98_02735 IPR000160 GGDEF domain CLM98_02740 IPR001296 Glycosyl transferase, family 1 CLM98_02740 IPR011835 Bacterial/plant glycogen synthase CLM98_02740 IPR013534 Starch synthase, catalytic domain CLM98_02745 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CLM98_02745 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02745 IPR013780 Glycosyl hydrolase, all-beta CLM98_02745 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CLM98_02745 IPR017853 Glycoside hydrolase superfamily CLM98_02745 IPR014756 Immunoglobulin E-set CLM98_02745 IPR037439 1,4-alpha-glucan-branching enzyme CLM98_02745 IPR013783 Immunoglobulin-like fold CLM98_02745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02750 IPR013783 Immunoglobulin-like fold CLM98_02750 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02750 IPR013780 Glycosyl hydrolase, all-beta CLM98_02750 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CLM98_02750 IPR017853 Glycoside hydrolase superfamily CLM98_02750 IPR014756 Immunoglobulin E-set CLM98_02750 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02750 IPR012768 Malto-oligosyltrehalose trehalohydrolase CLM98_02755 IPR017853 Glycoside hydrolase superfamily CLM98_02755 IPR003385 Glycoside hydrolase, family 77 CLM98_02760 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02760 IPR017853 Glycoside hydrolase superfamily CLM98_02760 IPR012767 Maltooligosyl trehalose synthase CLM98_02770 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02770 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02770 IPR013780 Glycosyl hydrolase, all-beta CLM98_02770 IPR014756 Immunoglobulin E-set CLM98_02770 IPR013783 Immunoglobulin-like fold CLM98_02770 IPR017853 Glycoside hydrolase superfamily CLM98_02770 IPR011837 Glycogen debranching enzyme, GlgX type CLM98_02775 IPR016040 NAD(P)-binding domain CLM98_02775 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLM98_02775 IPR036291 NAD(P)-binding domain superfamily CLM98_02780 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_02780 IPR036291 NAD(P)-binding domain superfamily CLM98_02780 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_02780 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_02785 IPR036291 NAD(P)-binding domain superfamily CLM98_02785 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_02785 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_02800 IPR010694 Uncharacterised protein family VirK CLM98_02805 IPR003423 Outer membrane efflux protein CLM98_02805 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_02820 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_02820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_02820 IPR001036 Acriflavin resistance protein CLM98_02825 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_02825 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_02825 IPR036291 NAD(P)-binding domain superfamily CLM98_02835 IPR014014 RNA helicase, DEAD-box type, Q motif CLM98_02835 IPR028622 ATP-dependent RNA helicase RhlE CLM98_02835 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLM98_02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02835 IPR001650 Helicase, C-terminal CLM98_02835 IPR011545 DEAD/DEAH box helicase domain CLM98_02835 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_02840 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_02840 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_02840 IPR000089 Biotin/lipoyl attachment CLM98_02840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_02840 IPR011053 Single hybrid motif CLM98_02840 IPR004167 Peripheral subunit-binding domain CLM98_02840 IPR036625 E3-binding domain superfamily CLM98_02850 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_02850 IPR029061 Thiamin diphosphate-binding fold CLM98_02850 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLM98_02850 IPR033248 Transketolase, C-terminal domain CLM98_02855 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CLM98_02855 IPR001017 Dehydrogenase, E1 component CLM98_02855 IPR029061 Thiamin diphosphate-binding fold CLM98_02865 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like CLM98_02865 IPR004981 Tryptophan 2,3-dioxygenase CLM98_02870 IPR000109 Proton-dependent oligopeptide transporter family CLM98_02870 IPR020846 Major facilitator superfamily domain CLM98_02870 IPR005279 Dipeptide/tripeptide permease CLM98_02870 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CLM98_02870 IPR036259 MFS transporter superfamily CLM98_02880 IPR000835 MarR-type HTH domain CLM98_02880 IPR023187 Transcriptional regulator MarR-type, conserved site CLM98_02880 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_02880 IPR036390 Winged helix DNA-binding domain superfamily CLM98_02885 IPR037523 Vicinal oxygen chelate (VOC) domain CLM98_02885 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal CLM98_02885 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal CLM98_02885 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_02885 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_02885 IPR005956 4-hydroxyphenylpyruvate dioxygenase CLM98_02895 IPR005708 Homogentisate 1,2-dioxygenase CLM98_02895 IPR022950 Homogentisate 1,2-dioxygenase, bacterial CLM98_02895 IPR014710 RmlC-like jelly roll fold CLM98_02895 IPR011051 RmlC-like cupin domain superfamily CLM98_02915 IPR005133 Na+/H+ antiporter subunit G CLM98_02920 IPR007208 Na(+)/H(+) antiporter subunit F-like CLM98_02930 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_02930 IPR004775 Na(+)/H(+) antiporter subunit D1 CLM98_02935 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CLM98_02935 IPR006673 Mnh complex subunit C1 CLM98_02940 IPR025383 Domain of unknown function DUF4040 CLM98_02940 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CLM98_02940 IPR005663 Monovalent cation proton antiporter subunit A CLM98_02940 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_02940 IPR005281 Monovalent cation:proton antiporter, subunit B CLM98_02940 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CLM98_02965 IPR000726 Glycoside hydrolase, family 19, catalytic CLM98_02965 IPR023346 Lysozyme-like domain superfamily CLM98_02985 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CLM98_02985 IPR028923 SAICAR synthetase/ADE2, N-terminal CLM98_02985 IPR018236 SAICAR synthetase, conserved site CLM98_02990 IPR007791 Co-chaperone DjlA, N-terminal CLM98_02990 IPR029024 TerB-like CLM98_02990 IPR036869 Chaperone J-domain superfamily CLM98_02990 IPR001623 DnaJ domain CLM98_02990 IPR023749 Co-chaperone DjlA CLM98_03000 IPR000056 Ribulose-phosphate 3-epimerase-like CLM98_03000 IPR013785 Aldolase-type TIM barrel CLM98_03000 IPR026019 Ribulose-phosphate 3-epimerase CLM98_03000 IPR011060 Ribulose-phosphate binding barrel CLM98_03005 IPR016181 Acyl-CoA N-acyltransferase CLM98_03005 IPR000182 GNAT domain CLM98_03010 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CLM98_03010 IPR022433 Lipid kinase YegS CLM98_03010 IPR001206 Diacylglycerol kinase, catalytic domain CLM98_03010 IPR005218 Diacylglycerol/lipid kinase CLM98_03010 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CLM98_03015 IPR019999 Anthranilate synthase component I-like CLM98_03015 IPR015890 Chorismate-utilising enzyme, C-terminal CLM98_03015 IPR005801 ADC synthase CLM98_03015 IPR005256 Anthranilate synthase component I, PabB-like CLM98_03015 IPR006805 Anthranilate synthase component I, N-terminal CLM98_03025 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CLM98_03025 IPR017926 Glutamine amidotransferase CLM98_03025 IPR029062 Class I glutamine amidotransferase-like CLM98_03035 IPR017459 Glycosyl transferase family 3, N-terminal domain CLM98_03035 IPR005940 Anthranilate phosphoribosyl transferase CLM98_03035 IPR000312 Glycosyl transferase, family 3 CLM98_03035 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CLM98_03035 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CLM98_03040 IPR013785 Aldolase-type TIM barrel CLM98_03040 IPR013798 Indole-3-glycerol phosphate synthase CLM98_03040 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CLM98_03040 IPR011060 Ribulose-phosphate binding barrel CLM98_03050 IPR018335 Transcription regulator HTH, Crp-type, conserved site CLM98_03050 IPR000595 Cyclic nucleotide-binding domain CLM98_03050 IPR014710 RmlC-like jelly roll fold CLM98_03050 IPR036390 Winged helix DNA-binding domain superfamily CLM98_03050 IPR018490 Cyclic nucleotide-binding-like CLM98_03050 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_03050 IPR012318 Crp-type HTH domain CLM98_03055 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CLM98_03055 IPR016067 S-adenosylmethionine decarboxylase, core CLM98_03055 IPR009165 S-adenosylmethionine decarboxylase, bacterial CLM98_03060 IPR000390 Small multidrug resistance protein family CLM98_03065 IPR011566 Ubiquinone biosynthesis protein Coq7 CLM98_03065 IPR009078 Ferritin-like superfamily CLM98_03065 IPR012347 Ferritin-like CLM98_03070 IPR023563 Ribosomal protein L13, conserved site CLM98_03070 IPR005823 Ribosomal protein L13, bacterial-type CLM98_03070 IPR005822 Ribosomal protein L13 CLM98_03070 IPR036899 Ribosomal protein L13 superfamily CLM98_03075 IPR000754 Ribosomal protein S9 CLM98_03075 IPR020574 Ribosomal protein S9, conserved site CLM98_03075 IPR023035 Ribosomal protein S9, bacterial/plastid CLM98_03075 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_03075 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_03090 IPR022927 RNA pyrophosphohydrolase RppH CLM98_03090 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_03090 IPR020084 NUDIX hydrolase, conserved site CLM98_03090 IPR000086 NUDIX hydrolase domain CLM98_03100 IPR012347 Ferritin-like CLM98_03100 IPR008331 Ferritin/DPS protein domain CLM98_03100 IPR009040 Ferritin-like diiron domain CLM98_03100 IPR002024 Bacterioferritin CLM98_03100 IPR009078 Ferritin-like superfamily CLM98_03105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_03105 IPR003660 HAMP domain CLM98_03105 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_03105 IPR005467 Histidine kinase domain CLM98_03105 IPR011006 CheY-like superfamily CLM98_03105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_03105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_03105 IPR001789 Signal transduction response regulator, receiver domain CLM98_03105 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_03105 IPR019247 Histidine kinase BarA, N-terminal CLM98_03105 IPR036641 HPT domain superfamily CLM98_03105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_03110 IPR011006 CheY-like superfamily CLM98_03110 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_03110 IPR001789 Signal transduction response regulator, receiver domain CLM98_03110 IPR039420 Transcriptional regulatory protein WalR-like CLM98_03110 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_03130 IPR023063 FeS cluster insertion protein ErpA CLM98_03130 IPR017870 FeS cluster insertion, C-terminal, conserved site CLM98_03130 IPR016092 FeS cluster insertion protein CLM98_03130 IPR000361 FeS cluster biogenesis CLM98_03130 IPR035903 HesB-like domain superfamily CLM98_03155 IPR015376 Zinc ribbon, NADH pyrophosphatase CLM98_03155 IPR000086 NUDIX hydrolase domain CLM98_03155 IPR020084 NUDIX hydrolase, conserved site CLM98_03155 IPR022925 NADH pyrophosphatase NudC CLM98_03155 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_03155 IPR015375 NADH pyrophosphatase-like, N-terminal CLM98_03160 IPR004485 Cobalamin biosynthesis CobD/CbiB CLM98_03160 IPR031347 Protein AmpE CLM98_03180 IPR036259 MFS transporter superfamily CLM98_03180 IPR011701 Major facilitator superfamily CLM98_03180 IPR023727 Lysophospholipid transporter LplT CLM98_03185 IPR036390 Winged helix DNA-binding domain superfamily CLM98_03185 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_03185 IPR000847 Transcription regulator HTH, LysR CLM98_03185 IPR005119 LysR, substrate-binding CLM98_03190 IPR036259 MFS transporter superfamily CLM98_03190 IPR020846 Major facilitator superfamily domain CLM98_03190 IPR011701 Major facilitator superfamily CLM98_03195 IPR010020 Integral membrane protein, YccS/YhfK CLM98_03195 IPR032692 Integral membrane protein YccS, N-terminal CLM98_03195 IPR010019 Integral membrane protein, YccS CLM98_03205 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLM98_03205 IPR011054 Rudiment single hybrid motif CLM98_03205 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CLM98_03205 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CLM98_03205 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CLM98_03205 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CLM98_03205 IPR016185 Pre-ATP-grasp domain superfamily CLM98_03205 IPR013815 ATP-grasp fold, subdomain 1 CLM98_03205 IPR011761 ATP-grasp fold CLM98_03205 IPR000115 Phosphoribosylglycinamide synthetase CLM98_03215 IPR024051 AICAR transformylase, duplicated domain superfamily CLM98_03215 IPR002695 Bifunctional purine biosynthesis protein PurH-like CLM98_03215 IPR016193 Cytidine deaminase-like CLM98_03215 IPR011607 Methylglyoxal synthase-like domain CLM98_03215 IPR036914 Methylglyoxal synthase-like domain superfamily CLM98_03220 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_03225 IPR022742 Serine aminopeptidase, S33 CLM98_03225 IPR022744 Methyltransferase domain, putative CLM98_03225 IPR029058 Alpha/Beta hydrolase fold CLM98_03225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_03230 IPR016130 Protein-tyrosine phosphatase, active site CLM98_03230 IPR020422 Dual specificity protein phosphatase domain CLM98_03230 IPR000340 Dual specificity phosphatase, catalytic domain CLM98_03230 IPR003595 Protein-tyrosine phosphatase, catalytic CLM98_03230 IPR000387 Tyrosine specific protein phosphatases domain CLM98_03230 IPR029021 Protein-tyrosine phosphatase-like CLM98_03255 IPR000374 Phosphatidate cytidylyltransferase CLM98_03260 IPR009057 Homeobox-like domain superfamily CLM98_03260 IPR002197 DNA binding HTH domain, Fis-type CLM98_03260 IPR005412 DNA-binding protein Fis CLM98_03270 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_03270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_03280 IPR004498 Ribosomal protein L11 methyltransferase CLM98_03280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_03305 IPR005481 Biotin carboxylase-like, N-terminal domain CLM98_03305 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_03305 IPR005482 Biotin carboxylase, C-terminal CLM98_03305 IPR013815 ATP-grasp fold, subdomain 1 CLM98_03305 IPR011764 Biotin carboxylation domain CLM98_03305 IPR016185 Pre-ATP-grasp domain superfamily CLM98_03305 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CLM98_03305 IPR011761 ATP-grasp fold CLM98_03305 IPR011054 Rudiment single hybrid motif CLM98_03315 IPR001882 Biotin-binding site CLM98_03315 IPR011053 Single hybrid motif CLM98_03315 IPR000089 Biotin/lipoyl attachment CLM98_03315 IPR001249 Acetyl-CoA biotin carboxyl carrier CLM98_03320 IPR036441 Dehydroquinase, class II superfamily CLM98_03320 IPR018509 Dehydroquinase, class II, conserved site CLM98_03320 IPR001874 Dehydroquinase, class II CLM98_03325 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CLM98_03325 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CLM98_03325 IPR036249 Thioredoxin-like superfamily CLM98_03325 IPR035671 DsbD gamma CLM98_03325 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CLM98_03325 IPR013766 Thioredoxin domain CLM98_03325 IPR022910 Thiol:disulphide interchange protein DsbD CLM98_03330 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria CLM98_03330 IPR004323 Divalent ion tolerance protein, CutA CLM98_03330 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_03330 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_03345 IPR002913 START domain CLM98_03345 IPR028347 START domain-containing protein CLM98_03345 IPR023393 START-like domain superfamily CLM98_03360 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_03360 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_03360 IPR036291 NAD(P)-binding domain superfamily CLM98_03365 IPR007346 Endonuclease I CLM98_03375 IPR037124 GroES chaperonin superfamily CLM98_03375 IPR011032 GroES-like superfamily CLM98_03375 IPR020818 GroES chaperonin family CLM98_03375 IPR018369 Chaperonin GroES, conserved site CLM98_03380 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CLM98_03380 IPR027413 GroEL-like equatorial domain superfamily CLM98_03380 IPR027409 GroEL-like apical domain superfamily CLM98_03380 IPR002423 Chaperonin Cpn60/TCP-1 family CLM98_03380 IPR018370 Chaperonin Cpn60, conserved site CLM98_03380 IPR001844 Chaperonin Cpn60 CLM98_03390 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_03390 IPR039426 Vitamin B12 transporter BtuB-like CLM98_03390 IPR012910 TonB-dependent receptor, plug domain CLM98_03390 IPR010917 TonB-dependent receptor, conserved site CLM98_03390 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_03390 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_03390 IPR010916 TonB box, conserved site CLM98_03390 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_03395 IPR006219 DHAP synthase, class 1 CLM98_03395 IPR006218 DAHP synthetase I/KDSA CLM98_03395 IPR013785 Aldolase-type TIM barrel CLM98_03410 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_03410 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_03410 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_03410 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_03420 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLM98_03420 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CLM98_03420 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CLM98_03425 IPR003744 Queuosine precursor transporter CLM98_03445 IPR029479 Nitroreductase CLM98_03445 IPR000415 Nitroreductase-like CLM98_03445 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE CLM98_03450 IPR023480 Uncharacterised protein family UPF0312/YceI CLM98_03450 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_03450 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CLM98_03475 IPR005777 Acetyl-S-ACP:malonate ACP transferase CLM98_03475 IPR037171 NagB/RpiA transferase-like CLM98_03480 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CLM98_03480 IPR009662 Malonate decarboxylase delta subunit CLM98_03485 IPR017556 Biotin-independent malonate decarboxylase, beta subunit CLM98_03485 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CLM98_03485 IPR034733 Acetyl-CoA carboxylase CLM98_03485 IPR029045 ClpP/crotonase-like domain superfamily CLM98_03495 IPR017557 Phosphoribosyl-dephospho-CoA transferase CLM98_03500 IPR002736 Triphosphoribosyl-dephospho-CoA protein CLM98_03500 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CLM98_03505 IPR014043 Acyl transferase CLM98_03505 IPR001227 Acyl transferase domain superfamily CLM98_03505 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_03505 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_03515 IPR000485 AsnC-type HTH domain CLM98_03515 IPR011711 GntR, C-terminal CLM98_03515 IPR000524 Transcription regulator HTH, GntR CLM98_03515 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_03515 IPR036390 Winged helix DNA-binding domain superfamily CLM98_03515 IPR008920 Transcription regulator FadR/GntR, C-terminal CLM98_03520 IPR023214 HAD superfamily CLM98_03520 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLM98_03520 IPR041492 Haloacid dehalogenase-like hydrolase CLM98_03520 IPR006439 HAD hydrolase, subfamily IA CLM98_03520 IPR036412 HAD-like superfamily CLM98_03520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLM98_03520 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLM98_03550 IPR011683 Glycosyl hydrolase family 53 CLM98_03550 IPR017853 Glycoside hydrolase superfamily CLM98_03555 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CLM98_03555 IPR004660 Pyruvate dehydrogenase E1 component CLM98_03555 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CLM98_03555 IPR029061 Thiamin diphosphate-binding fold CLM98_03555 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLM98_03555 IPR005474 Transketolase, N-terminal CLM98_03560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_03560 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLM98_03560 IPR001525 C-5 cytosine methyltransferase CLM98_03570 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_03570 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_03570 IPR036291 NAD(P)-binding domain superfamily CLM98_03585 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_03585 IPR036291 NAD(P)-binding domain superfamily CLM98_03585 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_03595 IPR016639 Glutathione S-transferase Omega/GSH CLM98_03595 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_03595 IPR040079 Glutathione Transferase family CLM98_03595 IPR004045 Glutathione S-transferase, N-terminal CLM98_03595 IPR036249 Thioredoxin-like superfamily CLM98_03595 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_03620 IPR023845 Domain of unknown function DUF3817, transmembrane CLM98_03620 IPR004869 Membrane transport protein MMPL domain CLM98_03620 IPR000731 Sterol-sensing domain CLM98_03630 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily CLM98_03630 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03630 IPR002469 Dipeptidylpeptidase IV, N-terminal domain CLM98_03630 IPR029058 Alpha/Beta hydrolase fold CLM98_03635 IPR011673 Protein of unknown function DUF1615 CLM98_03645 IPR007894 MASE2 CLM98_03645 IPR029787 Nucleotide cyclase CLM98_03645 IPR000160 GGDEF domain CLM98_03675 IPR000620 EamA domain CLM98_03680 IPR018313 Solute-binding protein family 3, conserved site CLM98_03680 IPR037298 Cyclohexadienyl dehydratase pheC CLM98_03680 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLM98_03690 IPR004840 Amino acid permease, conserved site CLM98_03690 IPR004841 Amino acid permease/ SLC12A domain CLM98_03710 IPR008928 Six-hairpin glycosidase superfamily CLM98_03710 IPR023720 Trehalase, periplasmic CLM98_03710 IPR018232 Glycoside hydrolase, family 37, conserved site CLM98_03710 IPR001661 Glycoside hydrolase, family 37 CLM98_03710 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_03725 IPR010979 Ribosomal protein S13-like, H2TH CLM98_03725 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CLM98_03725 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CLM98_03725 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CLM98_03725 IPR035937 MutM-like, N-terminal CLM98_03725 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CLM98_03760 IPR035919 EAL domain superfamily CLM98_03760 IPR001633 EAL domain CLM98_03760 IPR001610 PAC motif CLM98_03760 IPR029787 Nucleotide cyclase CLM98_03760 IPR000014 PAS domain CLM98_03760 IPR000700 PAS-associated, C-terminal CLM98_03760 IPR035965 PAS domain superfamily CLM98_03760 IPR013656 PAS fold-4 CLM98_03760 IPR013655 PAS fold-3 CLM98_03760 IPR000160 GGDEF domain CLM98_03765 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_03765 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_03765 IPR004090 Chemotaxis methyl-accepting receptor CLM98_03765 IPR003660 HAMP domain CLM98_03765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_03765 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_03770 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_03770 IPR001547 Glycoside hydrolase, family 5 CLM98_03770 IPR017853 Glycoside hydrolase superfamily CLM98_03770 IPR012291 CBM2, carbohydrate-binding domain superfamily CLM98_03770 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CLM98_03770 IPR001919 Carbohydrate-binding type-2 domain CLM98_03775 IPR018045 Sulphate anion transporter, conserved site CLM98_03775 IPR001902 SLC26A/SulP transporter CLM98_03775 IPR011547 SLC26A/SulP transporter domain CLM98_03775 IPR036513 STAS domain superfamily CLM98_03775 IPR002645 STAS domain CLM98_03785 IPR035965 PAS domain superfamily CLM98_03785 IPR000014 PAS domain CLM98_03785 IPR013656 PAS fold-4 CLM98_03785 IPR000160 GGDEF domain CLM98_03785 IPR029787 Nucleotide cyclase CLM98_03785 IPR000700 PAS-associated, C-terminal CLM98_03805 IPR001173 Glycosyltransferase 2-like CLM98_03805 IPR023725 Glucan biosynthesis glucosyltransferase H CLM98_03805 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_03815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_03815 IPR010559 Signal transduction histidine kinase, internal region CLM98_03815 IPR003018 GAF domain CLM98_03815 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLM98_03820 IPR001789 Signal transduction response regulator, receiver domain CLM98_03820 IPR007492 LytTR DNA-binding domain CLM98_03820 IPR011006 CheY-like superfamily CLM98_03825 IPR022418 Porphobilinogen deaminase, C-terminal CLM98_03825 IPR022417 Porphobilinogen deaminase, N-terminal CLM98_03825 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CLM98_03825 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CLM98_03825 IPR000860 Porphobilinogen deaminase CLM98_03855 IPR023302 Peptidase S9A, N-terminal domain CLM98_03855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03855 IPR002470 Peptidase S9A, prolyl oligopeptidase CLM98_03855 IPR029058 Alpha/Beta hydrolase fold CLM98_03860 IPR018022 IPP transferase CLM98_03860 IPR039657 Dimethylallyltransferase CLM98_03860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03870 IPR002470 Peptidase S9A, prolyl oligopeptidase CLM98_03870 IPR023302 Peptidase S9A, N-terminal domain CLM98_03870 IPR029058 Alpha/Beta hydrolase fold CLM98_03870 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03875 IPR007401 Protein of unknown function DUF454 CLM98_03885 IPR018510 Diaminopimelate epimerase, active site CLM98_03885 IPR001653 Diaminopimelate epimerase, DapF CLM98_03895 IPR010998 Integrase/recombinase, N-terminal CLM98_03895 IPR002104 Integrase, catalytic domain CLM98_03895 IPR023009 Tyrosine recombinase XerC/XerD CLM98_03895 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_03895 IPR004107 Integrase, SAM-like, N-terminal CLM98_03895 IPR011931 Tyrosine recombinase XerC CLM98_03895 IPR013762 Integrase-like, catalytic domain superfamily CLM98_03900 IPR022281 ATP-dependent protease, HslV subunit CLM98_03900 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_03900 IPR001353 Proteasome, subunit alpha/beta CLM98_03900 IPR023333 Proteasome B-type subunit CLM98_03905 IPR019489 Clp ATPase, C-terminal CLM98_03905 IPR004491 Heat shock protein HslU CLM98_03905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03905 IPR003959 ATPase, AAA-type, core CLM98_03905 IPR003593 AAA+ ATPase domain CLM98_03915 IPR000182 GNAT domain CLM98_03915 IPR016181 Acyl-CoA N-acyltransferase CLM98_03920 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLM98_03930 IPR023576 UbiE/COQ5 methyltransferase, conserved site CLM98_03930 IPR004033 UbiE/COQ5 methyltransferase CLM98_03930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_03935 IPR035965 PAS domain superfamily CLM98_03935 IPR029787 Nucleotide cyclase CLM98_03935 IPR005330 MHYT domain CLM98_03935 IPR000160 GGDEF domain CLM98_03935 IPR035919 EAL domain superfamily CLM98_03935 IPR001633 EAL domain CLM98_03940 IPR034016 Aminopeptidase N-type CLM98_03940 IPR014782 Peptidase M1, membrane alanine aminopeptidase CLM98_03940 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CLM98_03940 IPR024571 ERAP1-like C-terminal domain CLM98_03940 IPR042097 Aminopeptidase N-like , N-terminal CLM98_03960 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_03960 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLM98_03960 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_03960 IPR001479 Quinoprotein dehydrogenase, conserved site CLM98_03960 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family CLM98_03965 IPR022455 Methanol oxidation system protein MoxJ CLM98_03965 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLM98_03980 IPR014183 Alcohol dehydrogenase class III CLM98_03980 IPR020843 Polyketide synthase, enoylreductase domain CLM98_03980 IPR036291 NAD(P)-binding domain superfamily CLM98_03980 IPR011032 GroES-like superfamily CLM98_03980 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_03980 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_03980 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_03990 IPR002197 DNA binding HTH domain, Fis-type CLM98_03990 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_03990 IPR009057 Homeobox-like domain superfamily CLM98_03990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03990 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_03990 IPR003593 AAA+ ATPase domain CLM98_03990 IPR029016 GAF-like domain superfamily CLM98_03990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_03990 IPR025944 Sigma-54 interaction domain, conserved site CLM98_03990 IPR003018 GAF domain CLM98_03995 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_03995 IPR011611 Carbohydrate kinase PfkB CLM98_03995 IPR029056 Ribokinase-like CLM98_04000 IPR004753 Cell shape determining protein MreB CLM98_04005 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CLM98_04005 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CLM98_04005 IPR007221 Rod shape-determining protein MreC CLM98_04015 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04015 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CLM98_04015 IPR017790 Penicillin-binding protein 2 CLM98_04015 IPR001460 Penicillin-binding protein, transpeptidase CLM98_04015 IPR005311 Penicillin-binding protein, dimerisation domain CLM98_04020 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CLM98_04020 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CLM98_04020 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CLM98_04025 IPR000743 Glycoside hydrolase, family 28 CLM98_04025 IPR012334 Pectin lyase fold CLM98_04025 IPR011050 Pectin lyase fold/virulence factor CLM98_04025 IPR006626 Parallel beta-helix repeat CLM98_04030 IPR023346 Lysozyme-like domain superfamily CLM98_04030 IPR031304 Transglycosylase SLT domain 2 CLM98_04030 IPR011757 Lytic transglycosylase MltB CLM98_04035 IPR007730 Sporulation-like domain CLM98_04035 IPR012997 Rare lipoprotein A CLM98_04035 IPR036680 Sporulation-like domain superfamily CLM98_04035 IPR036908 RlpA-like domain superfamily CLM98_04035 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLM98_04035 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CLM98_04045 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04045 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CLM98_04045 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLM98_04045 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CLM98_04045 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLM98_04045 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLM98_04055 IPR027471 YbeD-like domain superfamily CLM98_04055 IPR007454 Uncharacterised protein family UPF0250 CLM98_04060 IPR000544 Octanoyltransferase CLM98_04060 IPR020605 Octanoyltransferase, conserved site CLM98_04060 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CLM98_04065 IPR006638 Elp3/MiaB/NifB CLM98_04065 IPR031691 Lipoyl synthase, N-terminal CLM98_04065 IPR007197 Radical SAM CLM98_04065 IPR013785 Aldolase-type TIM barrel CLM98_04065 IPR003698 Lipoyl synthase CLM98_04070 IPR004447 C-terminal-processing peptidase S41A CLM98_04070 IPR040573 Tail specific protease, N-terminal domain CLM98_04070 IPR036034 PDZ superfamily CLM98_04070 IPR001478 PDZ domain CLM98_04070 IPR020992 Tail specific protease, C-terminal CLM98_04070 IPR029045 ClpP/crotonase-like domain superfamily CLM98_04070 IPR005151 Tail specific protease CLM98_04080 IPR005119 LysR, substrate-binding CLM98_04080 IPR000847 Transcription regulator HTH, LysR CLM98_04080 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_04080 IPR036390 Winged helix DNA-binding domain superfamily CLM98_04090 IPR004821 Cytidyltransferase-like domain CLM98_04090 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain CLM98_04090 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_04090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_04090 IPR020084 NUDIX hydrolase, conserved site CLM98_04090 IPR000086 NUDIX hydrolase domain CLM98_04125 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_04125 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_04125 IPR006183 6-phosphogluconate dehydrogenase CLM98_04125 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CLM98_04125 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type CLM98_04125 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_04125 IPR036291 NAD(P)-binding domain superfamily CLM98_04130 IPR004104 Oxidoreductase, C-terminal CLM98_04130 IPR000683 Oxidoreductase, N-terminal CLM98_04130 IPR036291 NAD(P)-binding domain superfamily CLM98_04135 IPR007055 BON domain CLM98_04135 IPR014004 Transport-associated and nodulation domain, bacteria CLM98_04140 IPR016132 Phytochrome chromophore attachment domain CLM98_04140 IPR013654 PAS fold-2 CLM98_04140 IPR035965 PAS domain superfamily CLM98_04140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_04140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_04140 IPR001294 Phytochrome CLM98_04140 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_04140 IPR029016 GAF-like domain superfamily CLM98_04140 IPR003018 GAF domain CLM98_04140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_04140 IPR013515 Phytochrome, central region CLM98_04140 IPR005467 Histidine kinase domain CLM98_04145 IPR001789 Signal transduction response regulator, receiver domain CLM98_04145 IPR011006 CheY-like superfamily CLM98_04150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_04150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_04150 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_04150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_04150 IPR005467 Histidine kinase domain CLM98_04150 IPR029151 Periplasmic sensor-like domain superfamily CLM98_04150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04155 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLM98_04155 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CLM98_04160 IPR036291 NAD(P)-binding domain superfamily CLM98_04160 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_04160 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_04160 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_04205 IPR038591 NolW-like superfamily CLM98_04205 IPR004845 Type II secretion system GspD, conserved site CLM98_04205 IPR005644 NolW-like CLM98_04205 IPR001775 GspD/PilQ family CLM98_04205 IPR013356 Type II secretion system GspD CLM98_04205 IPR004846 Type II/III secretion system CLM98_04210 IPR013369 Type II secretion system GspE CLM98_04210 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_04210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04210 IPR001482 Type II/IV secretion system protein CLM98_04210 IPR042181 Type II secretion system, protein E, N-terminal CLM98_04215 IPR018076 Type II secretion system F domain CLM98_04215 IPR001992 Type II secretion system conserved site CLM98_04215 IPR003004 GspF/PilC family CLM98_04215 IPR042094 Type II secretion system F domain superfamily CLM98_04215 IPR011850 General secretion pathway protein F CLM98_04220 IPR013545 Type II secretion system protein G CLM98_04220 IPR012902 Prokaryotic N-terminal methylation site CLM98_04220 IPR000983 Bacterial general secretion pathway protein G-type pilin CLM98_04220 IPR010054 General secretion pathway protein G CLM98_04225 IPR022346 General secretion pathway, GspH CLM98_04225 IPR012902 Prokaryotic N-terminal methylation site CLM98_04225 IPR002416 Type II secretion system protein H CLM98_04230 IPR010052 Type II secretion system protein I CLM98_04230 IPR012902 Prokaryotic N-terminal methylation site CLM98_04230 IPR003413 Type II secretion system protein I domain CLM98_04235 IPR012902 Prokaryotic N-terminal methylation site CLM98_04235 IPR010055 Type II secretion system protein J CLM98_04240 IPR005628 General secretion pathway protein K CLM98_04240 IPR038072 GspK, central domain superfamily CLM98_04285 IPR036259 MFS transporter superfamily CLM98_04285 IPR011701 Major facilitator superfamily CLM98_04285 IPR005964 Bacterial glucose/galactose transporter CLM98_04290 IPR028082 Periplasmic binding protein-like I CLM98_04290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_04290 IPR000843 LacI-type HTH domain CLM98_04295 IPR035490 GlmS/FrlB, SIS domain 2 CLM98_04295 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CLM98_04295 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_04295 IPR001347 Sugar isomerase (SIS) CLM98_04295 IPR035466 GlmS/AgaS, SIS domain 1 CLM98_04295 IPR017932 Glutamine amidotransferase type 2 domain CLM98_04300 IPR032466 Metal-dependent hydrolase CLM98_04300 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLM98_04300 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CLM98_04300 IPR006680 Amidohydrolase-related CLM98_04310 IPR003607 HD/PDEase domain CLM98_04310 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CLM98_04310 IPR002646 Poly A polymerase, head domain CLM98_04310 IPR012006 tRNA nucleotidyltransferase, proteobacteria CLM98_04310 IPR006674 HD domain CLM98_04315 IPR012132 Glucose-methanol-choline oxidoreductase CLM98_04315 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CLM98_04315 IPR027424 Glucose Oxidase, domain 2 CLM98_04315 IPR011533 Oxygen-dependent choline dehydrogenase CLM98_04315 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_04315 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CLM98_04320 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_04320 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_04320 IPR015590 Aldehyde dehydrogenase domain CLM98_04320 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_04320 IPR011264 Betaine aldehyde dehydrogenase CLM98_04320 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_04320 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_04325 IPR000060 BCCT transporter family CLM98_04325 IPR018093 BCCT transporter, conserved site CLM98_04340 IPR001853 DSBA-like thioredoxin domain CLM98_04340 IPR036249 Thioredoxin-like superfamily CLM98_04340 IPR017937 Thioredoxin, conserved site CLM98_04340 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CLM98_04340 IPR013766 Thioredoxin domain CLM98_04350 IPR024167 Cytochrome c4-like CLM98_04350 IPR036909 Cytochrome c-like domain superfamily CLM98_04350 IPR009056 Cytochrome c-like domain CLM98_04355 IPR030393 EngB-type guanine nucleotide-binding (G) domain CLM98_04355 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CLM98_04355 IPR006073 GTP binding domain CLM98_04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04360 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLM98_04360 IPR001279 Metallo-beta-lactamase CLM98_04360 IPR022712 Beta-Casp domain CLM98_04360 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_04375 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_04375 IPR006336 Glutamate--cysteine ligase, GCS2 CLM98_04375 IPR035434 Glutamate--cysteine ligase, bacteria and plant CLM98_04375 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria CLM98_04380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_04380 IPR005467 Histidine kinase domain CLM98_04380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04380 IPR003660 HAMP domain CLM98_04380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_04380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_04380 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_04385 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_04385 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_04385 IPR001789 Signal transduction response regulator, receiver domain CLM98_04385 IPR039420 Transcriptional regulatory protein WalR-like CLM98_04385 IPR011006 CheY-like superfamily CLM98_04385 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_04400 IPR038390 Metal-sensitive transcriptional repressor superfamily CLM98_04400 IPR003735 Metal-sensitive transcriptional repressor CLM98_04405 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_04405 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_04405 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_04405 IPR020843 Polyketide synthase, enoylreductase domain CLM98_04405 IPR036291 NAD(P)-binding domain superfamily CLM98_04405 IPR014183 Alcohol dehydrogenase class III CLM98_04405 IPR011032 GroES-like superfamily CLM98_04410 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CLM98_04410 IPR014185 Glutathione-dependent formaldehyde-activating enzyme CLM98_04410 IPR011057 Mss4-like superfamily CLM98_04415 IPR014186 S-formylglutathione hydrolase CLM98_04415 IPR000801 Putative esterase CLM98_04415 IPR029058 Alpha/Beta hydrolase fold CLM98_04425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_04425 IPR000524 Transcription regulator HTH, GntR CLM98_04425 IPR036390 Winged helix DNA-binding domain superfamily CLM98_04425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_04425 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_04425 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_04425 IPR004839 Aminotransferase, class I/classII CLM98_04430 IPR003719 Phenazine biosynthesis PhzF protein CLM98_04435 IPR000620 EamA domain CLM98_04445 IPR003593 AAA+ ATPase domain CLM98_04445 IPR032781 ABC-transporter extension domain CLM98_04445 IPR017871 ABC transporter, conserved site CLM98_04445 IPR003439 ABC transporter-like CLM98_04445 IPR022374 Energy-dependent translational throttle protein EttA CLM98_04445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04455 IPR039429 Serine hydroxymethyltransferase-like domain CLM98_04455 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLM98_04455 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_04455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_04455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_04455 IPR001085 Serine hydroxymethyltransferase CLM98_04460 IPR003796 Ribonucleotide reductase regulator NrdR-like CLM98_04460 IPR005144 ATP-cone domain CLM98_04470 IPR016193 Cytidine deaminase-like CLM98_04470 IPR016192 APOBEC/CMP deaminase, zinc-binding CLM98_04470 IPR004794 Riboflavin biosynthesis protein RibD CLM98_04470 IPR011549 Riboflavin-specific deaminase, C-terminal CLM98_04470 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CLM98_04470 IPR002125 Cytidine and deoxycytidylate deaminase domain CLM98_04470 IPR024072 Dihydrofolate reductase-like domain superfamily CLM98_04480 IPR001783 Lumazine-binding protein CLM98_04480 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CLM98_04480 IPR026017 Lumazine-binding domain CLM98_04480 IPR017938 Riboflavin synthase-like beta-barrel CLM98_04485 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CLM98_04485 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLM98_04485 IPR036144 RibA-like superfamily CLM98_04485 IPR032677 GTP cyclohydrolase II CLM98_04490 IPR036467 Lumazine/riboflavin synthase superfamily CLM98_04490 IPR002180 Lumazine/riboflavin synthase CLM98_04490 IPR034964 Lumazine synthase CLM98_04495 IPR035926 NusB-like superfamily CLM98_04495 IPR006027 NusB/RsmB/TIM44 CLM98_04495 IPR011605 NusB antitermination factor CLM98_04500 IPR036921 PurM-like, N-terminal domain superfamily CLM98_04500 IPR010918 PurM-like, C-terminal domain CLM98_04500 IPR016188 PurM-like, N-terminal domain CLM98_04500 IPR036676 PurM-like, C-terminal domain superfamily CLM98_04500 IPR006283 Thiamine-monophosphate kinase CLM98_04525 IPR023298 P-type ATPase, transmembrane domain superfamily CLM98_04525 IPR004623 Potassium-transporting ATPase A chain CLM98_04530 IPR001757 P-type ATPase CLM98_04530 IPR008250 P-type ATPase, A domain superfamily CLM98_04530 IPR036412 HAD-like superfamily CLM98_04530 IPR023299 P-type ATPase, cytoplasmic domain N CLM98_04530 IPR018303 P-type ATPase, phosphorylation site CLM98_04530 IPR006391 P-type ATPase, B chain, subfamily IA CLM98_04530 IPR023298 P-type ATPase, transmembrane domain superfamily CLM98_04535 IPR003820 Potassium-transporting ATPase C chain CLM98_04540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_04540 IPR003018 GAF domain CLM98_04540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04540 IPR029016 GAF-like domain superfamily CLM98_04540 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CLM98_04540 IPR005467 Histidine kinase domain CLM98_04540 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_04540 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_04540 IPR038318 KdpD, transmembrane domain superfamily CLM98_04540 IPR025201 Sensor protein KdpD, transmembrane domain CLM98_04540 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_04545 IPR011006 CheY-like superfamily CLM98_04545 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_04545 IPR001789 Signal transduction response regulator, receiver domain CLM98_04545 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_04545 IPR039420 Transcriptional regulatory protein WalR-like CLM98_04560 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_04560 IPR016164 FAD-linked oxidase-like, C-terminal CLM98_04560 IPR004113 FAD-linked oxidase, C-terminal CLM98_04560 IPR004490 Glycolate oxidase subunit GlcD CLM98_04560 IPR006094 FAD linked oxidase, N-terminal CLM98_04560 IPR016166 FAD-binding domain, PCMH-type CLM98_04560 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLM98_04565 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLM98_04570 IPR011856 tRNA endonuclease-like domain superfamily CLM98_04570 IPR011335 Restriction endonuclease type II-like CLM98_04570 IPR003509 Uncharacterised protein family UPF0102 CLM98_04580 IPR000878 Tetrapyrrole methylase CLM98_04580 IPR035996 Tetrapyrrole methylase superfamily CLM98_04580 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_04580 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CLM98_04580 IPR014776 Tetrapyrrole methylase, subdomain 2 CLM98_04580 IPR008189 rRNA small subunit methyltransferase I CLM98_04600 IPR035642 MraZ, N-terminal CLM98_04600 IPR020603 MraZ domain CLM98_04600 IPR007159 SpoVT-AbrB domain CLM98_04600 IPR037914 SpoVT-AbrB domain superfamily CLM98_04600 IPR038619 MraZ superfamily CLM98_04600 IPR003444 Transcriptional regulator MraZ CLM98_04600 IPR035644 MraZ, C-terminal CLM98_04605 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CLM98_04605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_04605 IPR002903 Ribosomal RNA small subunit methyltransferase H CLM98_04610 IPR011922 Cell division protein FtsL CLM98_04615 IPR001460 Penicillin-binding protein, transpeptidase CLM98_04615 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CLM98_04615 IPR005311 Penicillin-binding protein, dimerisation domain CLM98_04615 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CLM98_04615 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04620 IPR013221 Mur ligase, central CLM98_04620 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CLM98_04620 IPR000713 Mur ligase, N-terminal catalytic domain CLM98_04620 IPR035911 MurE/MurF, N-terminal CLM98_04620 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_04620 IPR004101 Mur ligase, C-terminal CLM98_04620 IPR036565 Mur-like, catalytic domain superfamily CLM98_04625 IPR004101 Mur ligase, C-terminal CLM98_04625 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_04625 IPR013221 Mur ligase, central CLM98_04625 IPR000713 Mur ligase, N-terminal catalytic domain CLM98_04625 IPR035911 MurE/MurF, N-terminal CLM98_04625 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CLM98_04625 IPR036565 Mur-like, catalytic domain superfamily CLM98_04630 IPR000715 Glycosyl transferase, family 4 CLM98_04630 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CLM98_04630 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLM98_04635 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CLM98_04635 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CLM98_04640 IPR007235 Glycosyl transferase, family 28, C-terminal CLM98_04640 IPR006009 N-acetylglucosaminyltransferase, MurG CLM98_04640 IPR004276 Glycosyltransferase family 28, N-terminal domain CLM98_04645 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CLM98_04645 IPR000713 Mur ligase, N-terminal catalytic domain CLM98_04645 IPR036565 Mur-like, catalytic domain superfamily CLM98_04645 IPR013221 Mur ligase, central CLM98_04645 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_04645 IPR004101 Mur ligase, C-terminal CLM98_04650 IPR013815 ATP-grasp fold, subdomain 1 CLM98_04650 IPR005905 D-alanine--D-alanine ligase CLM98_04650 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLM98_04650 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLM98_04650 IPR011095 D-alanine--D-alanine ligase, C-terminal CLM98_04650 IPR011761 ATP-grasp fold CLM98_04650 IPR016185 Pre-ATP-grasp domain superfamily CLM98_04655 IPR026579 Cell division protein FtsQ CLM98_04655 IPR034746 POTRA domain CLM98_04655 IPR005548 Cell division protein FtsQ/DivIB CLM98_04655 IPR013685 POTRA domain, FtsQ-type CLM98_04660 IPR020823 Cell division protein FtsA CLM98_04660 IPR003494 SHS2 domain inserted in FtsA CLM98_04665 IPR000158 Cell division protein FtsZ CLM98_04665 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLM98_04665 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CLM98_04665 IPR003008 Tubulin/FtsZ, GTPase domain CLM98_04665 IPR020805 Cell division protein FtsZ, conserved site CLM98_04665 IPR024757 Cell division protein FtsZ, C-terminal CLM98_04665 IPR008280 Tubulin/FtsZ, C-terminal CLM98_04670 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CLM98_04670 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CLM98_04670 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_04670 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CLM98_04680 IPR016047 Peptidase M23 CLM98_04680 IPR011055 Duplicated hybrid motif CLM98_04680 IPR018392 LysM domain CLM98_04680 IPR013731 Opacity-associated protein A, N-terminal CLM98_04685 IPR014018 SecA motor DEAD CLM98_04685 IPR036670 SecA, preprotein cross-linking domain superfamily CLM98_04685 IPR011115 SecA DEAD-like, N-terminal CLM98_04685 IPR020937 SecA conserved site CLM98_04685 IPR000185 Protein translocase subunit SecA CLM98_04685 IPR004027 SEC-C motif CLM98_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04685 IPR011116 SecA Wing/Scaffold CLM98_04685 IPR036266 SecA, Wing/Scaffold superfamily CLM98_04685 IPR011130 SecA, preprotein cross-linking domain CLM98_04690 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_04690 IPR020084 NUDIX hydrolase, conserved site CLM98_04690 IPR000086 NUDIX hydrolase domain CLM98_04690 IPR020476 NUDIX hydrolase CLM98_04700 IPR029041 FAD-linked oxidoreductase-like CLM98_04700 IPR004620 5,10-methylenetetrahydrofolate reductase CLM98_04700 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase CLM98_04700 IPR003171 Methylenetetrahydrofolate reductase CLM98_04715 IPR032821 Ketoacyl-synthetase, C-terminal extension CLM98_04715 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_04715 IPR020807 Polyketide synthase, dehydratase domain CLM98_04715 IPR036291 NAD(P)-binding domain superfamily CLM98_04715 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_04715 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_04715 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_04715 IPR018201 Beta-ketoacyl synthase, active site CLM98_04715 IPR001227 Acyl transferase domain superfamily CLM98_04715 IPR014043 Acyl transferase CLM98_04715 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_04715 IPR036736 ACP-like superfamily CLM98_04715 IPR042104 Polyketide synthase, dehydratase domain superfamily CLM98_04715 IPR020843 Polyketide synthase, enoylreductase domain CLM98_04715 IPR013968 Polyketide synthase, ketoreductase domain CLM98_04715 IPR011032 GroES-like superfamily CLM98_04715 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_04715 IPR016039 Thiolase-like CLM98_04715 IPR009081 Phosphopantetheine binding ACP domain CLM98_04715 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_04715 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_04720 IPR036852 Peptidase S8/S53 domain superfamily CLM98_04720 IPR000209 Peptidase S8/S53 domain CLM98_04720 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_04720 IPR030400 Sedolisin domain CLM98_04720 IPR015366 Peptidase S53, activation domain CLM98_04740 IPR036291 NAD(P)-binding domain superfamily CLM98_04740 IPR000683 Oxidoreductase, N-terminal CLM98_04745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_04745 IPR017853 Glycoside hydrolase superfamily CLM98_04745 IPR006046 Alpha amylase CLM98_04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_04780 IPR041698 Methyltransferase domain 25 CLM98_04785 IPR042172 Adenosylhomocysteinase-like superfamily CLM98_04785 IPR000043 Adenosylhomocysteinase-like CLM98_04785 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLM98_04785 IPR036291 NAD(P)-binding domain superfamily CLM98_04785 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CLM98_04795 IPR033129 Phosphoenolpyruvate carboxylase, His active site CLM98_04795 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_04795 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CLM98_04795 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CLM98_04795 IPR021135 Phosphoenolpyruvate carboxylase CLM98_04830 IPR000560 Histidine phosphatase superfamily, clade-2 CLM98_04830 IPR029033 Histidine phosphatase superfamily CLM98_04830 IPR033379 Histidine acid phosphatase active site CLM98_04840 IPR022636 S-adenosylmethionine synthetase superfamily CLM98_04840 IPR002133 S-adenosylmethionine synthetase CLM98_04840 IPR022628 S-adenosylmethionine synthetase, N-terminal CLM98_04840 IPR022629 S-adenosylmethionine synthetase, central domain CLM98_04840 IPR022630 S-adenosylmethionine synthetase, C-terminal CLM98_04840 IPR022631 S-adenosylmethionine synthetase, conserved site CLM98_04850 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CLM98_04850 IPR023506 Trans-aconitate 2-methyltransferase CLM98_04850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_04850 IPR041698 Methyltransferase domain 25 CLM98_04855 IPR001269 tRNA-dihydrouridine synthase CLM98_04855 IPR032887 tRNA-dihydrouridine synthase B CLM98_04855 IPR035587 DUS-like, FMN-binding domain CLM98_04855 IPR018517 tRNA-dihydrouridine synthase, conserved site CLM98_04855 IPR013785 Aldolase-type TIM barrel CLM98_04855 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CLM98_04855 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CLM98_04865 IPR011877 Ribokinase CLM98_04865 IPR002139 Ribokinase/fructokinase CLM98_04865 IPR029056 Ribokinase-like CLM98_04865 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_04865 IPR011611 Carbohydrate kinase PfkB CLM98_04870 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CLM98_04870 IPR008276 Concentrative nucleoside transporter CLM98_04870 IPR011657 Concentrative nucleoside transporter C-terminal domain CLM98_04870 IPR002668 Concentrative nucleoside transporter N-terminal domain CLM98_04870 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CLM98_04880 IPR023210 NADP-dependent oxidoreductase domain CLM98_04880 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_04890 IPR010917 TonB-dependent receptor, conserved site CLM98_04890 IPR010916 TonB box, conserved site CLM98_04890 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_04890 IPR012910 TonB-dependent receptor, plug domain CLM98_04890 IPR039426 Vitamin B12 transporter BtuB-like CLM98_04890 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_04890 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_04910 IPR035906 MetI-like superfamily CLM98_04910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_04915 IPR003593 AAA+ ATPase domain CLM98_04915 IPR003439 ABC transporter-like CLM98_04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04915 IPR015859 ABC transporter, taurine import, TauD CLM98_04915 IPR017871 ABC transporter, conserved site CLM98_04925 IPR003819 TauD/TfdA-like domain CLM98_04925 IPR042098 Taurine dioxygenase TauD-like superfamily CLM98_04935 IPR017871 ABC transporter, conserved site CLM98_04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04935 IPR003439 ABC transporter-like CLM98_04935 IPR003593 AAA+ ATPase domain CLM98_04940 IPR013830 SGNH hydrolase-type esterase domain CLM98_04940 IPR036514 SGNH hydrolase superfamily CLM98_04945 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_04945 IPR001789 Signal transduction response regulator, receiver domain CLM98_04945 IPR011006 CheY-like superfamily CLM98_04945 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_04945 IPR039420 Transcriptional regulatory protein WalR-like CLM98_04945 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_04950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_04950 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_04950 IPR013727 Two-component sensor kinase, N-terminal CLM98_04950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_04950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_04950 IPR005467 Histidine kinase domain CLM98_04965 IPR036945 Diacylglycerol kinase (DAGK) superfamily CLM98_04965 IPR033718 Diacylglycerol kinase, prokaryotic CLM98_04965 IPR000829 DAGK family CLM98_04985 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CLM98_04990 IPR020940 Thymidylate synthase, active site CLM98_04990 IPR000398 Thymidylate synthase CLM98_04990 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CLM98_04990 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CLM98_05000 IPR024072 Dihydrofolate reductase-like domain superfamily CLM98_05000 IPR017925 Dihydrofolate reductase conserved site CLM98_05000 IPR001796 Dihydrofolate reductase domain CLM98_05000 IPR012259 Dihydrofolate reductase CLM98_05005 IPR025944 Sigma-54 interaction domain, conserved site CLM98_05005 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_05005 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_05005 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05005 IPR029995 Transcriptional activator SfnR/FlbD CLM98_05005 IPR009057 Homeobox-like domain superfamily CLM98_05005 IPR003593 AAA+ ATPase domain CLM98_05010 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLM98_05010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_05010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_05010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_05010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_05015 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CLM98_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05015 IPR003593 AAA+ ATPase domain CLM98_05015 IPR003439 ABC transporter-like CLM98_05015 IPR017871 ABC transporter, conserved site CLM98_05020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_05020 IPR035906 MetI-like superfamily CLM98_05030 IPR036661 Luciferase-like domain superfamily CLM98_05030 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CLM98_05030 IPR011251 Luciferase-like domain CLM98_05035 IPR019912 FMN reductase, MsuE-like CLM98_05035 IPR029039 Flavoprotein-like superfamily CLM98_05035 IPR005025 NADPH-dependent FMN reductase-like CLM98_05055 IPR011251 Luciferase-like domain CLM98_05055 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CLM98_05055 IPR036661 Luciferase-like domain superfamily CLM98_05060 IPR030678 Peptide/nickel binding protein, MppA-type CLM98_05060 IPR000914 Solute-binding protein family 5 domain CLM98_05060 IPR039424 Solute-binding protein family 5 CLM98_05060 IPR023765 Solute-binding protein family 5, conserved site CLM98_05065 IPR035906 MetI-like superfamily CLM98_05065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_05075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05075 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLM98_05075 IPR003593 AAA+ ATPase domain CLM98_05075 IPR017871 ABC transporter, conserved site CLM98_05075 IPR003439 ABC transporter-like CLM98_05080 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLM98_05080 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CLM98_05080 IPR029052 Metallo-dependent phosphatase-like CLM98_05080 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CLM98_05085 IPR023065 Uncharacterised protein family ApaG CLM98_05085 IPR036767 ApaG domain superfamily CLM98_05085 IPR007474 ApaG domain CLM98_05090 IPR011530 Ribosomal RNA adenine dimethylase CLM98_05090 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLM98_05090 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CLM98_05090 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLM98_05090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_05090 IPR023165 rRNA adenine dimethylase-like CLM98_05095 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CLM98_05095 IPR005255 PdxA family CLM98_05100 IPR023034 Peptidyl-prolyl isomerase SurA CLM98_05100 IPR015391 SurA N-terminal CLM98_05100 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLM98_05100 IPR027304 Trigger factor/SurA domain superfamily CLM98_05105 IPR020889 LPS-assembly protein LptD CLM98_05105 IPR005653 Organic solvent tolerance-like, N-terminal CLM98_05105 IPR007543 LptD, C-terminal CLM98_05120 IPR023801 Histone deacetylase domain CLM98_05120 IPR037138 Histone deacetylase domain superfamily CLM98_05120 IPR023696 Ureohydrolase domain superfamily CLM98_05120 IPR000286 Histone deacetylase family CLM98_05125 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CLM98_05125 IPR036451 Cobalamin adenosyltransferase-like superfamily CLM98_05125 IPR016030 Cobalamin adenosyltransferase-like CLM98_05140 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CLM98_05140 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CLM98_05140 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CLM98_05140 IPR002938 FAD-binding domain CLM98_05140 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_05145 IPR002938 FAD-binding domain CLM98_05145 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_05145 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CLM98_05145 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CLM98_05165 IPR008920 Transcription regulator FadR/GntR, C-terminal CLM98_05165 IPR000524 Transcription regulator HTH, GntR CLM98_05165 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_05165 IPR036390 Winged helix DNA-binding domain superfamily CLM98_05165 IPR011711 GntR, C-terminal CLM98_05170 IPR034937 Protocatechuate 4,5-dioxygenase beta chain CLM98_05170 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLM98_05175 IPR036622 Dioxygenase LigAB, LigA subunit superfamily CLM98_05175 IPR034940 Gallate dioxygenase, C-terminal CLM98_05175 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CLM98_05175 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLM98_05180 IPR005119 LysR, substrate-binding CLM98_05180 IPR000847 Transcription regulator HTH, LysR CLM98_05180 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_05180 IPR036390 Winged helix DNA-binding domain superfamily CLM98_05180 IPR012787 Pca transcription factor PcaQ CLM98_05185 IPR000873 AMP-dependent synthetase/ligase CLM98_05185 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_05185 IPR042099 AMP-dependent synthetase-like superfamily CLM98_05185 IPR020845 AMP-binding, conserved site CLM98_05190 IPR015590 Aldehyde dehydrogenase domain CLM98_05190 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_05190 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_05190 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_05190 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_05195 IPR029045 ClpP/crotonase-like domain superfamily CLM98_05195 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_05195 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_05215 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_05215 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_05215 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_05215 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_05220 IPR004104 Oxidoreductase, C-terminal CLM98_05220 IPR036291 NAD(P)-binding domain superfamily CLM98_05220 IPR000683 Oxidoreductase, N-terminal CLM98_05230 IPR040739 RlmM ferredoxin-like domain CLM98_05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_05230 IPR011224 Ribosomal RNA large subunit methyltransferase M CLM98_05230 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLM98_05255 IPR000620 EamA domain CLM98_05265 IPR022861 Glutamine-tRNA ligase, bacterial CLM98_05265 IPR004514 Glutamine-tRNA synthetase CLM98_05265 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_05265 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_05265 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CLM98_05265 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CLM98_05265 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CLM98_05265 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CLM98_05265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_05265 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_05280 IPR011006 CheY-like superfamily CLM98_05280 IPR000160 GGDEF domain CLM98_05280 IPR029787 Nucleotide cyclase CLM98_05280 IPR001789 Signal transduction response regulator, receiver domain CLM98_05285 IPR011006 CheY-like superfamily CLM98_05285 IPR003660 HAMP domain CLM98_05285 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_05285 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_05285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_05285 IPR036641 HPT domain superfamily CLM98_05285 IPR001789 Signal transduction response regulator, receiver domain CLM98_05285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_05285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_05285 IPR005467 Histidine kinase domain CLM98_05285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_05285 IPR019247 Histidine kinase BarA, N-terminal CLM98_05290 IPR011006 CheY-like superfamily CLM98_05290 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_05290 IPR001789 Signal transduction response regulator, receiver domain CLM98_05290 IPR000792 Transcription regulator LuxR, C-terminal CLM98_05300 IPR002569 Peptide methionine sulphoxide reductase MsrA CLM98_05300 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CLM98_05310 IPR013785 Aldolase-type TIM barrel CLM98_05310 IPR004730 Transaldolase type 1 CLM98_05310 IPR018225 Transaldolase, active site CLM98_05310 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CLM98_05315 IPR023459 Transcription elongation factor GreA/GreB family CLM98_05315 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_05315 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CLM98_05315 IPR028625 Regulator of nucleoside diphosphate kinase CLM98_05315 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CLM98_05325 IPR005119 LysR, substrate-binding CLM98_05325 IPR000847 Transcription regulator HTH, LysR CLM98_05325 IPR036390 Winged helix DNA-binding domain superfamily CLM98_05325 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_05330 IPR012081 Alkyl hydroperoxide reductase subunit F CLM98_05330 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_05330 IPR023753 FAD/NAD(P)-binding domain CLM98_05330 IPR002109 Glutaredoxin CLM98_05330 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLM98_05330 IPR012336 Thioredoxin-like fold CLM98_05330 IPR036249 Thioredoxin-like superfamily CLM98_05335 IPR013766 Thioredoxin domain CLM98_05335 IPR036249 Thioredoxin-like superfamily CLM98_05335 IPR019479 Peroxiredoxin, C-terminal CLM98_05335 IPR024706 Peroxiredoxin, AhpC-type CLM98_05335 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_05335 IPR017559 Alkyl hydroperoxide reductase subunit C CLM98_05340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_05340 IPR004556 Methyltransferase HemK-like CLM98_05340 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CLM98_05340 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CLM98_05340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_05340 IPR007848 Methyltransferase small domain CLM98_05345 IPR000073 Alpha/beta hydrolase fold-1 CLM98_05345 IPR005944 Proline iminopeptidase CLM98_05345 IPR029058 Alpha/Beta hydrolase fold CLM98_05345 IPR002410 Peptidase S33 CLM98_05355 IPR004385 Nucleoside diphosphate pyrophosphatase CLM98_05355 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_05355 IPR020084 NUDIX hydrolase, conserved site CLM98_05355 IPR000086 NUDIX hydrolase domain CLM98_05360 IPR012337 Ribonuclease H-like superfamily CLM98_05360 IPR002562 3'-5' exonuclease domain CLM98_05360 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLM98_05360 IPR002421 5'-3' exonuclease, N-terminal CLM98_05360 IPR019760 DNA-directed DNA polymerase, family A, conserved site CLM98_05360 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLM98_05360 IPR020045 DNA polymerase I-like, H3TH domain CLM98_05360 IPR018320 DNA polymerase 1 CLM98_05360 IPR002298 DNA polymerase A CLM98_05360 IPR036397 Ribonuclease H superfamily CLM98_05360 IPR008918 Helix-hairpin-helix motif, class 2 CLM98_05360 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CLM98_05360 IPR029060 PIN-like domain superfamily CLM98_05390 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CLM98_05390 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CLM98_05390 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLM98_05390 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLM98_05390 IPR036291 NAD(P)-binding domain superfamily CLM98_05390 IPR026255 NAD(P) transhydrogenase, alpha subunit CLM98_05390 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CLM98_05415 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CLM98_05420 IPR034300 NADP transhydrogenase beta-like domain CLM98_05420 IPR012136 NADP transhydrogenase, beta subunit CLM98_05420 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLM98_05435 IPR018300 Aminotransferase, class IV, conserved site CLM98_05435 IPR001544 Aminotransferase class IV CLM98_05435 IPR033939 Branched-chain aminotransferase CLM98_05435 IPR005786 Branched-chain amino acid aminotransferase II CLM98_05435 IPR036038 Aminotransferase-like, PLP-dependent enzymes CLM98_05440 IPR036852 Peptidase S8/S53 domain superfamily CLM98_05440 IPR034176 Peptidase MprA-like catalytic domain CLM98_05440 IPR015500 Peptidase S8, subtilisin-related CLM98_05440 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_05440 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_05440 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_05440 IPR000209 Peptidase S8/S53 domain CLM98_05440 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_05450 IPR036852 Peptidase S8/S53 domain superfamily CLM98_05450 IPR000209 Peptidase S8/S53 domain CLM98_05450 IPR015500 Peptidase S8, subtilisin-related CLM98_05450 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_05450 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_05450 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_05450 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_05450 IPR034176 Peptidase MprA-like catalytic domain CLM98_05455 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLM98_05455 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CLM98_05455 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLM98_05475 IPR001226 Flavodoxin, conserved site CLM98_05475 IPR010089 Flavoprotein WrbA-like CLM98_05475 IPR029039 Flavoprotein-like superfamily CLM98_05475 IPR005025 NADPH-dependent FMN reductase-like CLM98_05475 IPR008254 Flavodoxin/nitric oxide synthase CLM98_05480 IPR017039 Virulence factor BrkB CLM98_05480 IPR023679 Uncharacterised protein family UPF0761, bacterial CLM98_05485 IPR013740 Redoxin CLM98_05485 IPR036249 Thioredoxin-like superfamily CLM98_05485 IPR017937 Thioredoxin, conserved site CLM98_05485 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLM98_05485 IPR013766 Thioredoxin domain CLM98_05500 IPR016898 Polyphosphate kinase 2 CLM98_05500 IPR022488 Polyphosphate kinase-2-related CLM98_05500 IPR022486 Polyphosphate kinase 2, PA0141 CLM98_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05505 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CLM98_05505 IPR036425 MoaB/Mog-like domain superfamily CLM98_05505 IPR001453 MoaB/Mog domain CLM98_05505 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria CLM98_05505 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLM98_05515 IPR004373 Peptide chain release factor 1 CLM98_05515 IPR000352 Peptide chain release factor class I CLM98_05515 IPR005139 Peptide chain release factor CLM98_05525 IPR019734 Tetratricopeptide repeat CLM98_05525 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_05525 IPR013026 Tetratricopeptide repeat-containing domain CLM98_05530 IPR004565 Outer membrane lipoprotein LolB CLM98_05530 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLM98_05535 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05535 IPR036554 GHMP kinase, C-terminal domain superfamily CLM98_05535 IPR006204 GHMP kinase N-terminal domain CLM98_05535 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CLM98_05535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05535 IPR013750 GHMP kinase, C-terminal domain CLM98_05545 IPR029057 Phosphoribosyltransferase-like CLM98_05545 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CLM98_05545 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CLM98_05545 IPR005946 Ribose-phosphate pyrophosphokinase CLM98_05545 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CLM98_05545 IPR000836 Phosphoribosyltransferase domain CLM98_05550 IPR020055 Ribosomal protein L25, short-form CLM98_05550 IPR029751 Ribosomal protein L25 CLM98_05550 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CLM98_05550 IPR020057 Ribosomal protein L25, beta domain CLM98_05550 IPR037121 Ribosomal protein L25, C-terminal CLM98_05550 IPR001021 Ribosomal protein L25, long-form CLM98_05550 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CLM98_05555 IPR001328 Peptidyl-tRNA hydrolase CLM98_05555 IPR018171 Peptidyl-tRNA hydrolase, conserved site CLM98_05555 IPR036416 Peptidyl-tRNA hydrolase superfamily CLM98_05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05560 IPR006073 GTP binding domain CLM98_05560 IPR013029 YchF, C-terminal domain CLM98_05560 IPR012676 TGS-like CLM98_05560 IPR023192 TGS-like domain superfamily CLM98_05560 IPR031167 OBG-type guanine nucleotide-binding (G) domain CLM98_05560 IPR004095 TGS CLM98_05560 IPR012675 Beta-grasp domain superfamily CLM98_05560 IPR041706 YchF, N-terminal CLM98_05560 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CLM98_05580 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLM98_05580 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CLM98_05580 IPR004161 Translation elongation factor EFTu-like, domain 2 CLM98_05580 IPR033720 Elongation factor Tu, domain 2 CLM98_05580 IPR031157 Tr-type G domain, conserved site CLM98_05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05580 IPR005225 Small GTP-binding protein domain CLM98_05580 IPR000795 Transcription factor, GTP-binding domain CLM98_05580 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_05580 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLM98_05580 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_05590 IPR038379 SecE superfamily CLM98_05590 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CLM98_05590 IPR005807 SecE subunit of protein translocation complex, bacterial-like CLM98_05595 IPR036735 NusG, N-terminal domain superfamily CLM98_05595 IPR008991 Translation protein SH3-like domain superfamily CLM98_05595 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLM98_05595 IPR005824 KOW CLM98_05595 IPR006645 NusG, N-terminal CLM98_05595 IPR001062 Transcription antitermination protein, NusG CLM98_05595 IPR014722 Ribosomal protein L2, domain 2 CLM98_05600 IPR000911 Ribosomal protein L11/L12 CLM98_05600 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CLM98_05600 IPR020784 Ribosomal protein L11, N-terminal CLM98_05600 IPR020785 Ribosomal protein L11, conserved site CLM98_05600 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CLM98_05600 IPR020783 Ribosomal protein L11, C-terminal CLM98_05600 IPR006519 Ribosomal protein L11, bacterial-type CLM98_05605 IPR002143 Ribosomal protein L1 CLM98_05605 IPR023673 Ribosomal protein L1, conserved site CLM98_05605 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLM98_05605 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLM98_05605 IPR023674 Ribosomal protein L1-like CLM98_05605 IPR005878 Ribosomal protein L1, bacterial-type CLM98_05610 IPR022973 Ribosomal protein L10 CLM98_05610 IPR001790 Ribosomal protein L10P CLM98_05615 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CLM98_05615 IPR008932 Ribosomal protein L7/L12, oligomerisation CLM98_05615 IPR000206 Ribosomal protein L7/L12 CLM98_05615 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLM98_05615 IPR013823 Ribosomal protein L7/L12, C-terminal CLM98_05620 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CLM98_05620 IPR007641 RNA polymerase Rpb2, domain 7 CLM98_05620 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CLM98_05620 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CLM98_05620 IPR015712 DNA-directed RNA polymerase, subunit 2 CLM98_05620 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CLM98_05620 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CLM98_05620 IPR007121 RNA polymerase, beta subunit, conserved site CLM98_05620 IPR007644 RNA polymerase, beta subunit, protrusion CLM98_05620 IPR007642 RNA polymerase Rpb2, domain 2 CLM98_05620 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CLM98_05620 IPR007645 RNA polymerase Rpb2, domain 3 CLM98_05620 IPR014724 RNA polymerase Rpb2, OB-fold CLM98_05625 IPR000722 RNA polymerase, alpha subunit CLM98_05625 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CLM98_05625 IPR007081 RNA polymerase Rpb1, domain 5 CLM98_05625 IPR007083 RNA polymerase Rpb1, domain 4 CLM98_05625 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CLM98_05625 IPR007080 RNA polymerase Rpb1, domain 1 CLM98_05625 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CLM98_05625 IPR006592 RNA polymerase, N-terminal CLM98_05625 IPR007066 RNA polymerase Rpb1, domain 3 CLM98_05630 IPR012340 Nucleic acid-binding, OB-fold CLM98_05630 IPR006032 Ribosomal protein S12/S23 CLM98_05630 IPR005679 Ribosomal protein S12, bacterial-type CLM98_05635 IPR036823 Ribosomal protein S7 domain superfamily CLM98_05635 IPR023798 Ribosomal protein S7 domain CLM98_05635 IPR005717 Ribosomal protein S7, bacterial/organellar-type CLM98_05635 IPR020606 Ribosomal protein S7, conserved site CLM98_05635 IPR000235 Ribosomal protein S5/S7 CLM98_05640 IPR005517 Translation elongation factor EFG/EF2, domain IV CLM98_05640 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_05640 IPR000795 Transcription factor, GTP-binding domain CLM98_05640 IPR005225 Small GTP-binding protein domain CLM98_05640 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05640 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05640 IPR031157 Tr-type G domain, conserved site CLM98_05640 IPR004540 Translation elongation factor EFG/EF2 CLM98_05640 IPR000640 Elongation factor EFG, domain V-like CLM98_05640 IPR035649 EFG, domain V CLM98_05640 IPR035647 EF-G domain III/V-like CLM98_05640 IPR009022 Elongation factor G, domain III CLM98_05640 IPR041095 Elongation Factor G, domain II CLM98_05640 IPR004161 Translation elongation factor EFTu-like, domain 2 CLM98_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05645 IPR031157 Tr-type G domain, conserved site CLM98_05645 IPR033720 Elongation factor Tu, domain 2 CLM98_05645 IPR000795 Transcription factor, GTP-binding domain CLM98_05645 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLM98_05645 IPR004161 Translation elongation factor EFTu-like, domain 2 CLM98_05645 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_05645 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_05645 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CLM98_05645 IPR005225 Small GTP-binding protein domain CLM98_05645 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLM98_05650 IPR001848 Ribosomal protein S10 CLM98_05650 IPR018268 Ribosomal protein S10, conserved site CLM98_05650 IPR027486 Ribosomal protein S10 domain CLM98_05650 IPR036838 Ribosomal protein S10 domain superfamily CLM98_05655 IPR000597 Ribosomal protein L3 CLM98_05655 IPR019927 Ribosomal protein L3, bacterial/organelle-type CLM98_05655 IPR019926 Ribosomal protein L3, conserved site CLM98_05655 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_05660 IPR023574 Ribosomal protein L4 domain superfamily CLM98_05660 IPR013005 50S ribosomal protein uL4 CLM98_05660 IPR002136 Ribosomal protein L4/L1e CLM98_05665 IPR012678 Ribosomal protein L23/L15e core domain superfamily CLM98_05665 IPR013025 Ribosomal protein L25/L23 CLM98_05665 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLM98_05670 IPR014722 Ribosomal protein L2, domain 2 CLM98_05670 IPR008991 Translation protein SH3-like domain superfamily CLM98_05670 IPR014726 Ribosomal protein L2, domain 3 CLM98_05670 IPR022671 Ribosomal protein L2, conserved site CLM98_05670 IPR002171 Ribosomal protein L2 CLM98_05670 IPR022669 Ribosomal protein L2, C-terminal CLM98_05670 IPR022666 Ribosomal Proteins L2, RNA binding domain CLM98_05670 IPR012340 Nucleic acid-binding, OB-fold CLM98_05670 IPR005880 Ribosomal protein L2, bacterial/organellar-type CLM98_05675 IPR023575 Ribosomal protein S19, superfamily CLM98_05675 IPR005732 Ribosomal protein S19, bacterial-type CLM98_05675 IPR002222 Ribosomal protein S19/S15 CLM98_05675 IPR020934 Ribosomal protein S19 conserved site CLM98_05680 IPR001063 Ribosomal protein L22/L17 CLM98_05680 IPR018260 Ribosomal protein L22/L17, conserved site CLM98_05680 IPR036394 Ribosomal protein L22/L17 superfamily CLM98_05680 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CLM98_05685 IPR004087 K Homology domain CLM98_05685 IPR004044 K Homology domain, type 2 CLM98_05685 IPR018280 Ribosomal protein S3, conserved site CLM98_05685 IPR009019 K homology domain superfamily, prokaryotic type CLM98_05685 IPR005704 Ribosomal protein S3, bacterial-type CLM98_05685 IPR001351 Ribosomal protein S3, C-terminal CLM98_05685 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CLM98_05685 IPR015946 K homology domain-like, alpha/beta CLM98_05690 IPR000114 Ribosomal protein L16 CLM98_05690 IPR036920 Ribosomal protein L10e/L16 superfamily CLM98_05690 IPR016180 Ribosomal protein L10e/L16 CLM98_05690 IPR020798 Ribosomal protein L16, conserved site CLM98_05695 IPR001854 Ribosomal protein L29/L35 CLM98_05695 IPR036049 Ribosomal protein L29/L35 superfamily CLM98_05700 IPR000266 Ribosomal protein S17/S11 CLM98_05700 IPR012340 Nucleic acid-binding, OB-fold CLM98_05700 IPR019984 30S ribosomal protein S17 CLM98_05705 IPR019972 Ribosomal protein L14P, conserved site CLM98_05705 IPR005745 Ribosomal protein L14P, bacterial-type CLM98_05705 IPR000218 Ribosomal protein L14P CLM98_05705 IPR036853 Ribosomal protein L14 superfamily CLM98_05710 IPR014722 Ribosomal protein L2, domain 2 CLM98_05710 IPR003256 Ribosomal protein L24 CLM98_05710 IPR008991 Translation protein SH3-like domain superfamily CLM98_05710 IPR005824 KOW CLM98_05710 IPR041988 Ribosomal Protein L26/L24, KOW domain CLM98_05715 IPR020930 Ribosomal protein L5, bacterial-type CLM98_05715 IPR020929 Ribosomal protein L5, conserved site CLM98_05715 IPR022803 Ribosomal protein L5 domain superfamily CLM98_05715 IPR031310 Ribosomal protein L5, N-terminal CLM98_05715 IPR002132 Ribosomal protein L5 CLM98_05715 IPR031309 Ribosomal protein L5, C-terminal CLM98_05720 IPR023036 Ribosomal protein S14, bacterial/plastid CLM98_05720 IPR001209 Ribosomal protein S14 CLM98_05725 IPR000630 Ribosomal protein S8 CLM98_05725 IPR035987 Ribosomal protein S8 superfamily CLM98_05730 IPR000702 Ribosomal protein L6 CLM98_05730 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CLM98_05730 IPR019906 Ribosomal protein L6, bacterial-type CLM98_05730 IPR002358 Ribosomal protein L6, conserved site CLM98_05730 IPR020040 Ribosomal protein L6, alpha-beta domain CLM98_05735 IPR005484 Ribosomal protein L18 CLM98_05735 IPR004389 Ribosomal protein L18, bacterial-type CLM98_05740 IPR005324 Ribosomal protein S5, C-terminal CLM98_05740 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05740 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLM98_05740 IPR000851 Ribosomal protein S5 CLM98_05740 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05740 IPR005712 Ribosomal protein S5, bacterial-type CLM98_05740 IPR013810 Ribosomal protein S5, N-terminal CLM98_05745 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CLM98_05745 IPR005996 Ribosomal protein L30, bacterial-type CLM98_05745 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLM98_05750 IPR021131 Ribosomal protein L18e/L15P CLM98_05750 IPR001196 Ribosomal protein L15, conserved site CLM98_05750 IPR036227 Ribosomal L18e/L15P superfamily CLM98_05750 IPR005749 Ribosomal protein L15, bacterial-type CLM98_05750 IPR030878 Ribosomal protein L15 CLM98_05755 IPR002208 SecY/SEC61-alpha family CLM98_05755 IPR023201 SecY domain superfamily CLM98_05755 IPR026593 Protein translocase subunit SecY CLM98_05755 IPR030659 SecY conserved site CLM98_05760 IPR027437 30s ribosomal protein S13, C-terminal CLM98_05760 IPR018269 Ribosomal protein S13, conserved site CLM98_05760 IPR019980 Ribosomal protein S13, bacterial-type CLM98_05760 IPR010979 Ribosomal protein S13-like, H2TH CLM98_05760 IPR001892 Ribosomal protein S13 CLM98_05765 IPR001971 Ribosomal protein S11 CLM98_05765 IPR018102 Ribosomal S11, conserved site CLM98_05765 IPR019981 Ribosomal protein S11, bacterial-type CLM98_05765 IPR036967 Ribosomal protein S11 superfamily CLM98_05770 IPR022801 Ribosomal protein S4/S9 CLM98_05770 IPR005709 Ribosomal protein S4, bacterial-type CLM98_05770 IPR001912 Ribosomal protein S4/S9, N-terminal CLM98_05770 IPR018079 Ribosomal protein S4, conserved site CLM98_05770 IPR002942 RNA-binding S4 domain CLM98_05770 IPR036986 RNA-binding S4 domain superfamily CLM98_05775 IPR011262 DNA-directed RNA polymerase, insert domain CLM98_05775 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CLM98_05775 IPR011260 RNA polymerase, alpha subunit, C-terminal CLM98_05775 IPR036603 RNA polymerase, RBP11-like subunit CLM98_05775 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CLM98_05775 IPR011773 DNA-directed RNA polymerase, alpha subunit CLM98_05780 IPR036373 Ribosomal protein L17 superfamily CLM98_05780 IPR000456 Ribosomal protein L17 CLM98_05785 IPR023380 DsbB-like superfamily CLM98_05785 IPR022920 Disulphide bond formation protein DsbB CLM98_05785 IPR003752 Disulphide bond formation protein DsbB/BdbC CLM98_05805 IPR002480 DAHP synthetase, class II CLM98_05805 IPR013785 Aldolase-type TIM barrel CLM98_05815 IPR020556 Amidase, conserved site CLM98_05815 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLM98_05815 IPR023631 Amidase signature domain CLM98_05815 IPR000120 Amidase CLM98_05815 IPR036928 Amidase signature (AS) superfamily CLM98_05830 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CLM98_05830 IPR029000 Cyclophilin-like domain superfamily CLM98_05830 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLM98_05835 IPR036291 NAD(P)-binding domain superfamily CLM98_05835 IPR010945 Malate dehydrogenase, type 2 CLM98_05835 IPR001236 Lactate/malate dehydrogenase, N-terminal CLM98_05835 IPR022383 Lactate/malate dehydrogenase, C-terminal CLM98_05835 IPR001557 L-lactate/malate dehydrogenase CLM98_05835 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLM98_05840 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_05840 IPR004046 Glutathione S-transferase, C-terminal CLM98_05840 IPR004045 Glutathione S-transferase, N-terminal CLM98_05840 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_05840 IPR036249 Thioredoxin-like superfamily CLM98_05840 IPR040079 Glutathione Transferase family CLM98_05860 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_05860 IPR023753 FAD/NAD(P)-binding domain CLM98_05860 IPR013785 Aldolase-type TIM barrel CLM98_05860 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_05865 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CLM98_05865 IPR011032 GroES-like superfamily CLM98_05865 IPR020843 Polyketide synthase, enoylreductase domain CLM98_05865 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CLM98_05865 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_05865 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_05865 IPR036291 NAD(P)-binding domain superfamily CLM98_05875 IPR036737 OmpA-like domain superfamily CLM98_05875 IPR006664 Outer membrane protein, bacterial CLM98_05875 IPR008722 Outer membrane porin F, N-terminal CLM98_05875 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLM98_05875 IPR028974 TSP type-3 repeat CLM98_05875 IPR006665 OmpA-like domain CLM98_05875 IPR006690 Outer membrane protein, OmpA-like, conserved site CLM98_05885 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_05885 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_05885 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLM98_05885 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_05885 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_05895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_05895 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_05895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_05895 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CLM98_05895 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CLM98_05895 IPR004839 Aminotransferase, class I/classII CLM98_05900 IPR005669 Thiosulphate/Sulfate-binding protein CLM98_05900 IPR034408 Sulphate/thiosulphate-binding site CLM98_05900 IPR000957 Sulphate/thiosulphate-binding, conserved site CLM98_05905 IPR035906 MetI-like superfamily CLM98_05905 IPR011865 Sulphate ABC transporter, permease protein CysT CLM98_05905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_05905 IPR005667 Sulphate ABC transporter permease protein 2 CLM98_05910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_05910 IPR035906 MetI-like superfamily CLM98_05910 IPR005667 Sulphate ABC transporter permease protein 2 CLM98_05910 IPR011866 Sulphate ABC transporter, permease protein CysW CLM98_05915 IPR041193 CysA, C-terminal regulatory domain CLM98_05915 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CLM98_05915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05915 IPR003593 AAA+ ATPase domain CLM98_05915 IPR003439 ABC transporter-like CLM98_05915 IPR024765 TOBE-like domain CLM98_05915 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_05915 IPR017871 ABC transporter, conserved site CLM98_05915 IPR005666 Sulphate transport system permease protein 1 CLM98_05925 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_05925 IPR036291 NAD(P)-binding domain superfamily CLM98_05925 IPR020843 Polyketide synthase, enoylreductase domain CLM98_05925 IPR011032 GroES-like superfamily CLM98_05925 IPR004627 L-threonine 3-dehydrogenase CLM98_05925 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_05925 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_05945 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_05945 IPR008475 Bacterial phospholipase C, C-terminal domain CLM98_05945 IPR007312 Phosphoesterase CLM98_05945 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLM98_05945 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLM98_05955 IPR009003 Peptidase S1, PA clan CLM98_05955 IPR019500 Peptidase S46 CLM98_05960 IPR029033 Histidine phosphatase superfamily CLM98_05960 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_05965 IPR004101 Mur ligase, C-terminal CLM98_05965 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_05965 IPR018109 Folylpolyglutamate synthetase, conserved site CLM98_05965 IPR001645 Folylpolyglutamate synthetase CLM98_05965 IPR013221 Mur ligase, central CLM98_05965 IPR036565 Mur-like, catalytic domain superfamily CLM98_05980 IPR029057 Phosphoribosyltransferase-like CLM98_05980 IPR035584 Amidophosphoribosyltransferase, N-terminal CLM98_05980 IPR005854 Amidophosphoribosyltransferase CLM98_05980 IPR017932 Glutamine amidotransferase type 2 domain CLM98_05980 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_05980 IPR000836 Phosphoribosyltransferase domain CLM98_05985 IPR007402 Protein of unknown function DUF455 CLM98_05985 IPR009078 Ferritin-like superfamily CLM98_05985 IPR011197 Uncharacterised conserved protein UCP012318 CLM98_05995 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_06005 IPR010138 UDP-2,3-diacylglucosamine hydrolase CLM98_06005 IPR029052 Metallo-dependent phosphatase-like CLM98_06005 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLM98_06010 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLM98_06010 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_06015 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLM98_06015 IPR001296 Glycosyl transferase, family 1 CLM98_06020 IPR003695 Ppx/GppA phosphatase CLM98_06020 IPR030673 Pyrophosphatase, GppA/Ppx-type CLM98_06020 IPR022371 Exopolyphosphatase CLM98_06025 IPR036830 Polyphosphate kinase middle domain superfamily CLM98_06025 IPR036832 Polyphosphate kinase N-terminal domain superfamily CLM98_06025 IPR025198 Polyphosphate kinase N-terminal domain CLM98_06025 IPR041108 Polyphosphate kinase, C-terminal domain 1 CLM98_06025 IPR025200 Polyphosphate kinase C-terminal domain 2 CLM98_06025 IPR024953 Polyphosphate kinase middle domain CLM98_06025 IPR003414 Polyphosphate kinase CLM98_06030 IPR000014 PAS domain CLM98_06030 IPR035965 PAS domain superfamily CLM98_06030 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_06030 IPR013767 PAS fold CLM98_06030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_06030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_06030 IPR021766 Phosphate regulon sensor protein PhoR CLM98_06030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_06030 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CLM98_06030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_06030 IPR005467 Histidine kinase domain CLM98_06035 IPR011006 CheY-like superfamily CLM98_06035 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_06035 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_06035 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CLM98_06035 IPR001789 Signal transduction response regulator, receiver domain CLM98_06035 IPR039420 Transcriptional regulatory protein WalR-like CLM98_06035 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_06040 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_06040 IPR019734 Tetratricopeptide repeat CLM98_06040 IPR013026 Tetratricopeptide repeat-containing domain CLM98_06040 IPR030873 Beta-barrel assembly-enhancing protease CLM98_06040 IPR001915 Peptidase M48 CLM98_06045 IPR014025 Glutaredoxin subgroup CLM98_06045 IPR011900 Glutaredoxin, GrxC CLM98_06045 IPR002109 Glutaredoxin CLM98_06045 IPR036249 Thioredoxin-like superfamily CLM98_06045 IPR011767 Glutaredoxin active site CLM98_06055 IPR024084 Isopropylmalate dehydrogenase-like domain CLM98_06205 IPR027304 Trigger factor/SurA domain superfamily CLM98_06205 IPR036611 Trigger factor ribosome-binding domain superfamily CLM98_06205 IPR008881 Trigger factor, ribosome-binding, bacterial CLM98_06205 IPR037041 Trigger factor, C-terminal domain superfamily CLM98_06205 IPR008880 Trigger factor, C-terminal CLM98_06205 IPR005215 Trigger factor CLM98_06210 IPR029045 ClpP/crotonase-like domain superfamily CLM98_06210 IPR033135 ClpP, histidine active site CLM98_06210 IPR001907 ATP-dependent Clp protease proteolytic subunit CLM98_06210 IPR018215 ClpP, Ser active site CLM98_06210 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLM98_06215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06215 IPR004487 Clp protease, ATP-binding subunit ClpX CLM98_06215 IPR019489 Clp ATPase, C-terminal CLM98_06215 IPR003959 ATPase, AAA-type, core CLM98_06215 IPR003593 AAA+ ATPase domain CLM98_06215 IPR038366 Zinc finger, ClpX C4-type superfamily CLM98_06215 IPR010603 Zinc finger, ClpX C4-type CLM98_06220 IPR027543 Lon protease, bacterial CLM98_06220 IPR008268 Peptidase S16, active site CLM98_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06220 IPR003111 Lon, substrate-binding domain CLM98_06220 IPR027065 Lon protease CLM98_06220 IPR008269 Peptidase S16, Lon proteolytic domain CLM98_06220 IPR004815 Lon protease, bacterial/eukaryotic-type CLM98_06220 IPR015947 PUA-like superfamily CLM98_06220 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_06220 IPR003593 AAA+ ATPase domain CLM98_06220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_06220 IPR003959 ATPase, AAA-type, core CLM98_06225 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLM98_06225 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_06225 IPR000119 Histone-like DNA-binding protein CLM98_06245 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLM98_06245 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLM98_06250 IPR036779 LysM domain superfamily CLM98_06250 IPR038765 Papain-like cysteine peptidase superfamily CLM98_06250 IPR018392 LysM domain CLM98_06250 IPR007921 CHAP domain CLM98_06255 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CLM98_06255 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_06255 IPR001279 Metallo-beta-lactamase CLM98_06255 IPR017782 Hydroxyacylglutathione hydrolase CLM98_06255 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CLM98_06265 IPR012337 Ribonuclease H-like superfamily CLM98_06265 IPR002156 Ribonuclease H domain CLM98_06265 IPR036397 Ribonuclease H superfamily CLM98_06265 IPR022892 Ribonuclease HI CLM98_06270 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CLM98_06270 IPR006309 DNA polymerase 3, epsilon subunit CLM98_06270 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_06270 IPR012337 Ribonuclease H-like superfamily CLM98_06270 IPR036397 Ribonuclease H superfamily CLM98_06275 IPR001932 PPM-type phosphatase domain CLM98_06275 IPR036457 PPM-type phosphatase domain superfamily CLM98_06275 IPR015655 Protein phosphatase 2C family CLM98_06290 IPR002201 Glycosyl transferase, family 9 CLM98_06295 IPR011009 Protein kinase-like domain superfamily CLM98_06295 IPR022826 3-deoxy-D-manno-octulosonic acid kinase CLM98_06300 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_06300 IPR001279 Metallo-beta-lactamase CLM98_06300 IPR013471 Ribonuclease Z/BN CLM98_06305 IPR013483 Molybdenum cofactor biosynthesis protein A CLM98_06305 IPR013785 Aldolase-type TIM barrel CLM98_06305 IPR006638 Elp3/MiaB/NifB CLM98_06305 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLM98_06305 IPR010505 Molybdenum cofactor synthesis C-terminal CLM98_06305 IPR007197 Radical SAM CLM98_06315 IPR023045 Molybdenum cofactor biosynthesis C CLM98_06315 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CLM98_06315 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CLM98_06320 IPR012675 Beta-grasp domain superfamily CLM98_06320 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLM98_06320 IPR003749 Sulfur carrier ThiS/MoaD-like CLM98_06325 IPR003448 Molybdopterin biosynthesis MoaE CLM98_06325 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CLM98_06335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_06370 IPR012763 DNA polymerase III, subunit gamma/ tau CLM98_06370 IPR022754 DNA polymerase III, gamma subunit, domain III CLM98_06370 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CLM98_06370 IPR021029 DNA polymerase III, tau subunit, domain V CLM98_06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06370 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CLM98_06370 IPR003593 AAA+ ATPase domain CLM98_06370 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLM98_06370 IPR001270 ClpA/B family CLM98_06375 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CLM98_06375 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLM98_06380 IPR023628 Recombination protein RecR, C4-type zinc finger CLM98_06380 IPR000093 DNA recombination protein RecR CLM98_06380 IPR015967 Recombination protein RecR, conserved site CLM98_06380 IPR034137 RecR, TOPRIM domain CLM98_06380 IPR006171 TOPRIM domain CLM98_06380 IPR023627 Recombination protein RecR CLM98_06385 IPR011146 HIT-like domain CLM98_06385 IPR001310 Histidine triad (HIT) protein CLM98_06385 IPR019808 Histidine triad, conserved site CLM98_06385 IPR036265 HIT-like superfamily CLM98_06395 IPR025403 Domain of unknown function DUF4129 CLM98_06395 IPR038765 Papain-like cysteine peptidase superfamily CLM98_06395 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal CLM98_06395 IPR002931 Transglutaminase-like CLM98_06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06405 IPR041628 ChlI/MoxR, AAA lid domain CLM98_06405 IPR011703 ATPase, AAA-3 CLM98_06425 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CLM98_06425 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_06430 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CLM98_06430 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CLM98_06435 IPR011332 Zinc-binding ribosomal protein CLM98_06435 IPR002677 Ribosomal protein L32p CLM98_06440 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLM98_06440 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLM98_06440 IPR016039 Thiolase-like CLM98_06440 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_06450 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_06450 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_06450 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CLM98_06450 IPR024925 Malonyl CoA-acyl carrier protein transacylase CLM98_06450 IPR014043 Acyl transferase CLM98_06450 IPR001227 Acyl transferase domain superfamily CLM98_06455 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_06455 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_06455 IPR036291 NAD(P)-binding domain superfamily CLM98_06455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_06460 IPR009081 Phosphopantetheine binding ACP domain CLM98_06460 IPR003231 Acyl carrier protein (ACP) CLM98_06460 IPR006162 Phosphopantetheine attachment site CLM98_06460 IPR036736 ACP-like superfamily CLM98_06465 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_06465 IPR016039 Thiolase-like CLM98_06465 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_06465 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CLM98_06465 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_06465 IPR000794 Beta-ketoacyl synthase CLM98_06465 IPR018201 Beta-ketoacyl synthase, active site CLM98_06470 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I CLM98_06470 IPR006805 Anthranilate synthase component I, N-terminal CLM98_06470 IPR019999 Anthranilate synthase component I-like CLM98_06470 IPR005801 ADC synthase CLM98_06470 IPR015890 Chorismate-utilising enzyme, C-terminal CLM98_06475 IPR003770 Endolytic murein transglycosylase CLM98_06480 IPR004622 DNA polymerase III, delta prime subunit CLM98_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06480 IPR015199 DNA polymerase III, delta subunit, C-terminal CLM98_06500 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_06500 IPR025944 Sigma-54 interaction domain, conserved site CLM98_06500 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR CLM98_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06500 IPR009057 Homeobox-like domain superfamily CLM98_06500 IPR003593 AAA+ ATPase domain CLM98_06500 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal CLM98_06500 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_06500 IPR002197 DNA binding HTH domain, Fis-type CLM98_06505 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_06505 IPR040442 Pyruvate kinase-like domain superfamily CLM98_06505 IPR012695 2-methylisocitrate lyase CLM98_06505 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLM98_06505 IPR039556 ICL/PEPM domain CLM98_06510 IPR036969 Citrate synthase superfamily CLM98_06510 IPR024176 Citrate synthase, bacterial-type CLM98_06510 IPR016142 Citrate synthase-like, large alpha subdomain CLM98_06510 IPR016143 Citrate synthase-like, small alpha subdomain CLM98_06510 IPR002020 Citrate synthase CLM98_06510 IPR011278 2-methylcitrate synthase/citrate synthase type I CLM98_06510 IPR019810 Citrate synthase active site CLM98_06515 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_06515 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLM98_06515 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CLM98_06515 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_06515 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent CLM98_06515 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLM98_06515 IPR036008 Aconitase, iron-sulfur domain CLM98_06520 IPR022789 Antitoxin ParD CLM98_06520 IPR038296 Antitoxin ParD superfamily CLM98_06520 IPR010985 Ribbon-helix-helix CLM98_06535 IPR012709 2-methyl-aconitate isomerase PrpF CLM98_06535 IPR007400 PrpF protein CLM98_06540 IPR010105 TonB-dependent siderophore receptor CLM98_06540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_06540 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_06540 IPR012910 TonB-dependent receptor, plug domain CLM98_06540 IPR039426 Vitamin B12 transporter BtuB-like CLM98_06555 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain CLM98_06555 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLM98_06555 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain CLM98_06555 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain CLM98_06555 IPR001599 Alpha-2-macroglobulin CLM98_06555 IPR002890 Macroglobulin domain CLM98_06555 IPR011625 Alpha-2-macroglobulin, bait region domain CLM98_06555 IPR040639 Alpha-2-macroglobulin, MG1 domain CLM98_06555 IPR021868 Alpha-2-macroglobulin MG3 domain CLM98_06555 IPR026284 Alpha-2-macroglobulin, bacteria CLM98_06575 IPR001460 Penicillin-binding protein, transpeptidase CLM98_06575 IPR001264 Glycosyl transferase, family 51 CLM98_06575 IPR012338 Beta-lactamase/transpeptidase-like CLM98_06575 IPR023346 Lysozyme-like domain superfamily CLM98_06575 IPR011815 Penicillin-binding protein 1C CLM98_06575 IPR009647 Penicillin-binding, C-terminal CLM98_06575 IPR036950 Penicillin binding protein transglycosylase domain CLM98_06585 IPR036249 Thioredoxin-like superfamily CLM98_06585 IPR013766 Thioredoxin domain CLM98_06585 IPR013740 Redoxin CLM98_06585 IPR037944 Peroxiredoxin-5-like CLM98_06595 IPR018253 DnaJ domain, conserved site CLM98_06595 IPR008971 HSP40/DnaJ peptide-binding CLM98_06595 IPR036869 Chaperone J-domain superfamily CLM98_06595 IPR002939 Chaperone DnaJ, C-terminal CLM98_06595 IPR023859 DNA-binding protein, curved-DNA CLM98_06595 IPR001623 DnaJ domain CLM98_06600 IPR001789 Signal transduction response regulator, receiver domain CLM98_06600 IPR011006 CheY-like superfamily CLM98_06605 IPR001107 Band 7 domain CLM98_06605 IPR001972 Stomatin family CLM98_06605 IPR036013 Band 7/SPFH domain superfamily CLM98_06605 IPR020980 Menbrane protein HflK, N-terminal CLM98_06605 IPR010201 HflK CLM98_06610 IPR010200 HflC CLM98_06610 IPR001107 Band 7 domain CLM98_06610 IPR036013 Band 7/SPFH domain superfamily CLM98_06620 IPR033128 Adenylosuccinate synthase, active site CLM98_06620 IPR018220 Adenylosuccinate synthase, GTP-binding site CLM98_06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06620 IPR042110 Adenylosuccinate synthetase, domain 2 CLM98_06620 IPR001114 Adenylosuccinate synthetase CLM98_06620 IPR042109 Adenylosuccinate synthetase, domain 1 CLM98_06620 IPR042111 Adenylosuccinate synthetase, domain 3 CLM98_06625 IPR034016 Aminopeptidase N-type CLM98_06625 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CLM98_06625 IPR014782 Peptidase M1, membrane alanine aminopeptidase CLM98_06625 IPR024571 ERAP1-like C-terminal domain CLM98_06625 IPR042097 Aminopeptidase N-like , N-terminal CLM98_06630 IPR036291 NAD(P)-binding domain superfamily CLM98_06630 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_06630 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_06635 IPR001647 DNA-binding HTH domain, TetR-type CLM98_06635 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_06635 IPR009057 Homeobox-like domain superfamily CLM98_06635 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLM98_06710 IPR002156 Ribonuclease H domain CLM98_06710 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_06710 IPR029033 Histidine phosphatase superfamily CLM98_06710 IPR012337 Ribonuclease H-like superfamily CLM98_06710 IPR014636 RNase H, phosphoglycerate mutase domain-containing CLM98_06710 IPR036397 Ribonuclease H superfamily CLM98_06715 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CLM98_06715 IPR029056 Ribokinase-like CLM98_06725 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_06725 IPR008928 Six-hairpin glycosidase superfamily CLM98_06725 IPR011613 GH15-like domain CLM98_06730 IPR036291 NAD(P)-binding domain superfamily CLM98_06730 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_06730 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_06740 IPR041371 Glycosyl hydrolase family 92 N-terminal domain CLM98_06740 IPR008928 Six-hairpin glycosidase superfamily CLM98_06740 IPR005887 Alpha-1,2-mannosidase, putative CLM98_06740 IPR012939 Glycosyl hydrolase family 92 CLM98_06740 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_06760 IPR005982 Thioredoxin reductase CLM98_06760 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLM98_06760 IPR023753 FAD/NAD(P)-binding domain CLM98_06760 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_06780 IPR041552 UvrA DNA-binding domain CLM98_06780 IPR017871 ABC transporter, conserved site CLM98_06780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06785 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLM98_06785 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLM98_06785 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLM98_06785 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLM98_06790 IPR016166 FAD-binding domain, PCMH-type CLM98_06790 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CLM98_06790 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_06790 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLM98_06790 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_06790 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLM98_06795 IPR012675 Beta-grasp domain superfamily CLM98_06795 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_06795 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_06795 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_06795 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_06795 IPR002888 [2Fe-2S]-binding CLM98_06795 IPR036884 [2Fe-2S]-binding domain superfamily CLM98_06830 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_06830 IPR039418 LexA-like CLM98_06830 IPR006197 Peptidase S24, LexA-like CLM98_06830 IPR036390 Winged helix DNA-binding domain superfamily CLM98_06830 IPR006199 LexA repressor, DNA-binding domain CLM98_06830 IPR036286 LexA/Signal peptidase-like superfamily CLM98_06830 IPR006200 Transcription regulator LexA CLM98_06830 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_06845 IPR023073 DNA polymerase, error-prone CLM98_06845 IPR029460 DNA polymerase, helix-hairpin-helix motif CLM98_06845 IPR004013 PHP domain CLM98_06845 IPR040982 DNA polymerase III alpha subunit finger domain CLM98_06845 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLM98_06845 IPR016195 Polymerase/histidinol phosphatase-like CLM98_06845 IPR004805 DNA polymerase III, alpha subunit CLM98_06845 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLM98_06855 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_06855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_06855 IPR029058 Alpha/Beta hydrolase fold CLM98_06865 IPR004813 Oligopeptide transporter, OPT superfamily CLM98_06865 IPR004814 Oligopeptide transporter OPT CLM98_06880 IPR002469 Dipeptidylpeptidase IV, N-terminal domain CLM98_06880 IPR011659 WD40-like Beta Propeller CLM98_06880 IPR029058 Alpha/Beta hydrolase fold CLM98_06880 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_06880 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_06895 IPR003313 AraC-type arabinose-binding/dimerisation domain CLM98_06895 IPR009057 Homeobox-like domain superfamily CLM98_06895 IPR037923 Transcription regulator HTH-like CLM98_06895 IPR014710 RmlC-like jelly roll fold CLM98_06895 IPR018060 DNA binding HTH domain, AraC-type CLM98_06915 IPR029062 Class I glutamine amidotransferase-like CLM98_06915 IPR010582 Catalase immune-responsive domain CLM98_06915 IPR018028 Catalase, mono-functional, haem-containing CLM98_06915 IPR024708 Catalase active site CLM98_06915 IPR041399 Large catalase, C-terminal domain CLM98_06915 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CLM98_06915 IPR002226 Catalase haem-binding site CLM98_06915 IPR037060 Catalase core domain superfamily CLM98_06915 IPR011614 Catalase core domain CLM98_06915 IPR020835 Catalase superfamily CLM98_06920 IPR020471 Aldo/keto reductase CLM98_06920 IPR023210 NADP-dependent oxidoreductase domain CLM98_06920 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_06925 IPR029058 Alpha/Beta hydrolase fold CLM98_06925 IPR002018 Carboxylesterase, type B CLM98_06925 IPR019826 Carboxylesterase type B, active site CLM98_06930 IPR003437 Glycine dehydrogenase (decarboxylating) CLM98_06930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_06930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_06930 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_06930 IPR020581 Glycine cleavage system P protein CLM98_06935 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLM98_06935 IPR020846 Major facilitator superfamily domain CLM98_06935 IPR036259 MFS transporter superfamily CLM98_06935 IPR004734 Multidrug resistance protein CLM98_06935 IPR011701 Major facilitator superfamily CLM98_06965 IPR001789 Signal transduction response regulator, receiver domain CLM98_06965 IPR039420 Transcriptional regulatory protein WalR-like CLM98_06965 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_06965 IPR011006 CheY-like superfamily CLM98_06965 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_06970 IPR003660 HAMP domain CLM98_06970 IPR013727 Two-component sensor kinase, N-terminal CLM98_06970 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_06970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_06970 IPR005467 Histidine kinase domain CLM98_06970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_06970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_06970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_06980 IPR036707 Cell division topological specificity factor MinE superfamily CLM98_06980 IPR005527 Cell division topological specificity factor MinE CLM98_06985 IPR025501 ATP binding protein MinD CLM98_06985 IPR010223 ATP binding protein MinD, bacterial-type CLM98_06985 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06990 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CLM98_06990 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CLM98_06990 IPR007874 Septum formation inhibitor MinC, N-terminal CLM98_06990 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CLM98_06990 IPR005526 Septum formation inhibitor MinC, C-terminal CLM98_06990 IPR013033 Septum formation inhibitor MinC CLM98_07005 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_07005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07005 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07010 IPR011006 CheY-like superfamily CLM98_07010 IPR001789 Signal transduction response regulator, receiver domain CLM98_07010 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_07010 IPR000792 Transcription regulator LuxR, C-terminal CLM98_07025 IPR003265 HhH-GPD domain CLM98_07025 IPR011257 DNA glycosylase CLM98_07055 IPR011054 Rudiment single hybrid motif CLM98_07055 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase CLM98_07055 IPR016185 Pre-ATP-grasp domain superfamily CLM98_07055 IPR013815 ATP-grasp fold, subdomain 1 CLM98_07055 IPR011761 ATP-grasp fold CLM98_07055 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLM98_07065 IPR007471 N-end aminoacyl transferase, N-terminal CLM98_07065 IPR007472 N-end rule aminoacyl transferase, C-terminal CLM98_07065 IPR030700 N-end rule aminoacyl transferase CLM98_07065 IPR017138 Aspartate/glutamate leucyltransferase CLM98_07065 IPR016181 Acyl-CoA N-acyltransferase CLM98_07085 IPR029069 HotDog domain superfamily CLM98_07085 IPR003703 Acyl-CoA thioesterase CLM98_07090 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_07090 IPR029045 ClpP/crotonase-like domain superfamily CLM98_07100 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CLM98_07100 IPR029069 HotDog domain superfamily CLM98_07105 IPR041552 UvrA DNA-binding domain CLM98_07105 IPR004602 UvrABC system subunit A CLM98_07105 IPR041102 UvrA, interaction domain CLM98_07105 IPR003439 ABC transporter-like CLM98_07105 IPR017871 ABC transporter, conserved site CLM98_07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07110 IPR001787 Ribosomal protein L21 CLM98_07110 IPR028909 Ribosomal protein L21-like CLM98_07110 IPR036164 L21-like superfamily CLM98_07110 IPR018258 Ribosomal protein L21, conserved site CLM98_07115 IPR018261 Ribosomal protein L27, conserved site CLM98_07115 IPR001684 Ribosomal protein L27 CLM98_07120 IPR006074 GTP1/OBG, conserved site CLM98_07120 IPR014100 GTP-binding protein Obg/CgtA CLM98_07120 IPR036726 GTP1/OBG domain superfamily CLM98_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07120 IPR035101 GTP-binding protein, Obg-type CLM98_07120 IPR006073 GTP binding domain CLM98_07120 IPR031167 OBG-type guanine nucleotide-binding (G) domain CLM98_07120 IPR006169 GTP1/OBG domain CLM98_07125 IPR036510 Ribosomal protein S20 superfamily CLM98_07125 IPR002583 Ribosomal protein S20 CLM98_07130 IPR004268 Peptidoglycan biosynthesis protein MurJ CLM98_07135 IPR015864 FAD synthetase CLM98_07135 IPR023465 Riboflavin kinase domain superfamily CLM98_07135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07135 IPR002606 Riboflavin kinase, bacterial CLM98_07135 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CLM98_07135 IPR023468 Riboflavin kinase CLM98_07140 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CLM98_07140 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_07140 IPR002301 Isoleucine-tRNA ligase CLM98_07140 IPR023585 Isoleucine-tRNA ligase, type 1 CLM98_07140 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_07140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_07140 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_07140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07140 IPR010663 Zinc finger, FPG/IleRS-type CLM98_07140 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_07145 IPR001872 Peptidase A8, signal peptidase II CLM98_07150 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CLM98_07165 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLM98_07165 IPR000883 Cytochrome c oxidase subunit I CLM98_07165 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLM98_07165 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CLM98_07165 IPR023616 Cytochrome c oxidase-like, subunit I domain CLM98_07170 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CLM98_07170 IPR000298 Cytochrome c oxidase subunit III-like CLM98_07170 IPR035973 Cytochrome c oxidase subunit III-like superfamily CLM98_07170 IPR024791 Cytochrome c oxidase subunit III CLM98_07170 IPR033946 Ubiquinol oxidase subunit III domain CLM98_07170 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CLM98_07175 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CLM98_07175 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CLM98_07185 IPR003593 AAA+ ATPase domain CLM98_07185 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_07185 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_07185 IPR041166 LapB, rubredoxin metal binding domain CLM98_07185 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CLM98_07185 IPR004504 DNA repair protein RadA CLM98_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07190 IPR008523 Protein of unknown function DUF805 CLM98_07200 IPR018060 DNA binding HTH domain, AraC-type CLM98_07200 IPR018062 HTH domain AraC-type, conserved site CLM98_07205 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07205 IPR037196 HSP90, C-terminal domain CLM98_07205 IPR001404 Heat shock protein Hsp90 family CLM98_07205 IPR020575 Heat shock protein Hsp90, N-terminal CLM98_07205 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_07220 IPR036513 STAS domain superfamily CLM98_07220 IPR002645 STAS domain CLM98_07220 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain CLM98_07220 IPR012292 Globin/Protoglobin CLM98_07225 IPR036513 STAS domain superfamily CLM98_07225 IPR002645 STAS domain CLM98_07230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07230 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07240 IPR036641 HPT domain superfamily CLM98_07240 IPR003660 HAMP domain CLM98_07240 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07240 IPR011006 CheY-like superfamily CLM98_07240 IPR005467 Histidine kinase domain CLM98_07240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_07240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_07240 IPR033414 Periplasmic sensor domain CLM98_07240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07240 IPR001789 Signal transduction response regulator, receiver domain CLM98_07240 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_07245 IPR001789 Signal transduction response regulator, receiver domain CLM98_07245 IPR005467 Histidine kinase domain CLM98_07245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_07245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_07245 IPR035965 PAS domain superfamily CLM98_07245 IPR011006 CheY-like superfamily CLM98_07245 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07245 IPR013656 PAS fold-4 CLM98_07245 IPR000014 PAS domain CLM98_07250 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLM98_07250 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CLM98_07250 IPR006710 Glycoside hydrolase, family 43 CLM98_07250 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_07255 IPR010105 TonB-dependent siderophore receptor CLM98_07255 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_07255 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_07255 IPR039426 Vitamin B12 transporter BtuB-like CLM98_07255 IPR012910 TonB-dependent receptor, plug domain CLM98_07260 IPR017937 Thioredoxin, conserved site CLM98_07260 IPR013766 Thioredoxin domain CLM98_07260 IPR036249 Thioredoxin-like superfamily CLM98_07260 IPR005746 Thioredoxin CLM98_07265 IPR009874 Protein of unknown function DUF1428 CLM98_07265 IPR011008 Dimeric alpha-beta barrel CLM98_07270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07270 IPR029016 GAF-like domain superfamily CLM98_07270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_07270 IPR038318 KdpD, transmembrane domain superfamily CLM98_07270 IPR003018 GAF domain CLM98_07270 IPR025201 Sensor protein KdpD, transmembrane domain CLM98_07270 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07270 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CLM98_07270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_07270 IPR005467 Histidine kinase domain CLM98_07275 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_07275 IPR035909 Methylesterase CheB, C-terminal CLM98_07280 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_07280 IPR000780 MCP methyltransferase, CheR-type CLM98_07280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_07280 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLM98_07285 IPR001789 Signal transduction response regulator, receiver domain CLM98_07285 IPR011006 CheY-like superfamily CLM98_07285 IPR003660 HAMP domain CLM98_07285 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07285 IPR005467 Histidine kinase domain CLM98_07285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_07285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07285 IPR036641 HPT domain superfamily CLM98_07285 IPR019247 Histidine kinase BarA, N-terminal CLM98_07285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_07285 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_07290 IPR001789 Signal transduction response regulator, receiver domain CLM98_07290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07290 IPR035965 PAS domain superfamily CLM98_07290 IPR000700 PAS-associated, C-terminal CLM98_07290 IPR000014 PAS domain CLM98_07290 IPR001610 PAC motif CLM98_07290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_07290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_07290 IPR005467 Histidine kinase domain CLM98_07290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_07290 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_07290 IPR011006 CheY-like superfamily CLM98_07295 IPR011006 CheY-like superfamily CLM98_07295 IPR001789 Signal transduction response regulator, receiver domain CLM98_07300 IPR008263 Glycoside hydrolase, family 16, active site CLM98_07300 IPR000757 Glycoside hydrolase family 16 CLM98_07300 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLM98_07305 IPR017853 Glycoside hydrolase superfamily CLM98_07305 IPR013780 Glycosyl hydrolase, all-beta CLM98_07305 IPR010720 Alpha-L-arabinofuranosidase, C-terminal CLM98_07310 IPR011013 Galactose mutarotase-like domain superfamily CLM98_07310 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CLM98_07310 IPR015443 Aldose 1-epimerase CLM98_07310 IPR018052 Aldose 1-epimerase, conserved site CLM98_07310 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_07315 IPR002541 Cytochrome c assembly protein CLM98_07315 IPR017562 Cytochrome c-type biogenesis protein CcsA CLM98_07320 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CLM98_07320 IPR013822 Signal recognition particle SRP54, helical bundle CLM98_07320 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CLM98_07320 IPR004780 Signal recognition particle protein CLM98_07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07320 IPR022941 Signal recognition particle, SRP54 subunit CLM98_07320 IPR003593 AAA+ ATPase domain CLM98_07320 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_07320 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CLM98_07325 IPR004136 Nitronate monooxygenase CLM98_07325 IPR013785 Aldolase-type TIM barrel CLM98_07330 IPR001544 Aminotransferase class IV CLM98_07330 IPR005785 Branched-chain amino acid aminotransferase I CLM98_07330 IPR033939 Branched-chain aminotransferase CLM98_07330 IPR036038 Aminotransferase-like, PLP-dependent enzymes CLM98_07330 IPR018300 Aminotransferase, class IV, conserved site CLM98_07335 IPR000307 Ribosomal protein S16 CLM98_07335 IPR020592 Ribosomal protein S16, conserved site CLM98_07335 IPR023803 Ribosomal protein S16 domain superfamily CLM98_07340 IPR011961 16S rRNA processing protein RimM CLM98_07340 IPR027275 PRC-barrel domain CLM98_07340 IPR011033 PRC-barrel-like superfamily CLM98_07340 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_07340 IPR002676 RimM, N-terminal CLM98_07340 IPR036976 RimM, N-terminal domain superfamily CLM98_07345 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CLM98_07345 IPR029028 Alpha/beta knot methyltransferases CLM98_07345 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CLM98_07345 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CLM98_07345 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_07350 IPR008991 Translation protein SH3-like domain superfamily CLM98_07350 IPR038657 Ribosomal protein L19 superfamily CLM98_07350 IPR001857 Ribosomal protein L19 CLM98_07350 IPR018257 Ribosomal protein L19, conserved site CLM98_07370 IPR002942 RNA-binding S4 domain CLM98_07370 IPR036986 RNA-binding S4 domain superfamily CLM98_07370 IPR025708 Heat shock protein 15 CLM98_07375 IPR019793 Peroxidases heam-ligand binding site CLM98_07375 IPR019794 Peroxidase, active site CLM98_07375 IPR010255 Haem peroxidase superfamily CLM98_07375 IPR002016 Haem peroxidase CLM98_07375 IPR000763 Catalase-peroxidase haem CLM98_07385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07385 IPR036678 MutS, connector domain superfamily CLM98_07385 IPR007860 DNA mismatch repair protein MutS, connector domain CLM98_07385 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLM98_07385 IPR016151 DNA mismatch repair protein MutS, N-terminal CLM98_07385 IPR007696 DNA mismatch repair protein MutS, core CLM98_07385 IPR007861 DNA mismatch repair protein MutS, clamp CLM98_07385 IPR017261 DNA mismatch repair protein MutS/MSH CLM98_07385 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CLM98_07385 IPR000432 DNA mismatch repair protein MutS, C-terminal CLM98_07385 IPR005748 DNA mismatch repair protein MutS CLM98_07395 IPR006530 YD repeat CLM98_07395 IPR031325 RHS repeat CLM98_07395 IPR022385 Rhs repeat-associated core CLM98_07395 IPR001826 RHS protein CLM98_07420 IPR040605 Glycoside hydrolase family 2, domain 5 CLM98_07420 IPR017853 Glycoside hydrolase superfamily CLM98_07420 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_07420 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CLM98_07420 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_07420 IPR006103 Glycoside hydrolase family 2, catalytic domain CLM98_07420 IPR008964 Invasin/intimin cell-adhesion fragments CLM98_07420 IPR013783 Immunoglobulin-like fold CLM98_07420 IPR032311 Domain of unknown function DUF4982 CLM98_07420 IPR006101 Glycoside hydrolase, family 2 CLM98_07420 IPR023232 Glycoside hydrolase, family 2, active site CLM98_07420 IPR008979 Galactose-binding-like domain superfamily CLM98_07425 IPR017853 Glycoside hydrolase superfamily CLM98_07425 IPR011683 Glycosyl hydrolase family 53 CLM98_07435 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_07435 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_07435 IPR010359 IrrE N-terminal-like domain CLM98_07435 IPR026281 HTH-type transcriptional regulator RamB CLM98_07435 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CLM98_07440 IPR010061 Methylmalonate-semialdehyde dehydrogenase CLM98_07440 IPR015590 Aldehyde dehydrogenase domain CLM98_07440 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_07440 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_07440 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_07440 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_07445 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_07445 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_07445 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_07445 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_07445 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_07445 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_07445 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_07450 IPR014748 Enoyl-CoA hydratase, C-terminal CLM98_07450 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_07450 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_07450 IPR029045 ClpP/crotonase-like domain superfamily CLM98_07455 IPR036291 NAD(P)-binding domain superfamily CLM98_07455 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLM98_07455 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_07455 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLM98_07455 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLM98_07455 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_07455 IPR029045 ClpP/crotonase-like domain superfamily CLM98_07455 IPR012802 Fatty oxidation complex, alpha subunit FadJ CLM98_07455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_07460 IPR036291 NAD(P)-binding domain superfamily CLM98_07460 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_07460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_07460 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_07460 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_07460 IPR011548 3-hydroxyisobutyrate dehydrogenase CLM98_07460 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLM98_07460 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_07465 IPR027469 Cation efflux transmembrane domain superfamily CLM98_07465 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CLM98_07465 IPR002524 Cation efflux protein CLM98_07470 IPR036291 NAD(P)-binding domain superfamily CLM98_07470 IPR029045 ClpP/crotonase-like domain superfamily CLM98_07470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_07470 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLM98_07470 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLM98_07470 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLM98_07470 IPR012802 Fatty oxidation complex, alpha subunit FadJ CLM98_07470 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_07475 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLM98_07475 IPR007627 RNA polymerase sigma-70 region 2 CLM98_07475 IPR014286 RNA polymerase sigma-70 RpoE type CLM98_07475 IPR013325 RNA polymerase sigma factor, region 2 CLM98_07475 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_07475 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_07475 IPR039425 RNA polymerase sigma-70 like CLM98_07475 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_07475 IPR014284 RNA polymerase sigma-70 like domain CLM98_07485 IPR001940 Peptidase S1C CLM98_07485 IPR011782 Peptidase S1C, Do CLM98_07485 IPR036034 PDZ superfamily CLM98_07485 IPR001478 PDZ domain CLM98_07485 IPR009003 Peptidase S1, PA clan CLM98_07490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07490 IPR005225 Small GTP-binding protein domain CLM98_07490 IPR006297 Elongation factor 4 CLM98_07490 IPR013842 GTP-binding protein LepA, C-terminal CLM98_07490 IPR035654 Elongation factor 4, domain IV CLM98_07490 IPR000640 Elongation factor EFG, domain V-like CLM98_07490 IPR004161 Translation elongation factor EFTu-like, domain 2 CLM98_07490 IPR031157 Tr-type G domain, conserved site CLM98_07490 IPR035647 EF-G domain III/V-like CLM98_07490 IPR000795 Transcription factor, GTP-binding domain CLM98_07490 IPR038363 LepA, C-terminal domain superfamily CLM98_07495 IPR036286 LexA/Signal peptidase-like superfamily CLM98_07495 IPR000223 Peptidase S26A, signal peptidase I CLM98_07495 IPR019758 Peptidase S26A, signal peptidase I, conserved site CLM98_07495 IPR019756 Peptidase S26A, signal peptidase I, serine active site CLM98_07495 IPR019533 Peptidase S26 CLM98_07495 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CLM98_07505 IPR036389 Ribonuclease III, endonuclease domain superfamily CLM98_07505 IPR014720 Double-stranded RNA-binding domain CLM98_07505 IPR000999 Ribonuclease III domain CLM98_07505 IPR011907 Ribonuclease III CLM98_07515 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLM98_07515 IPR012340 Nucleic acid-binding, OB-fold CLM98_07515 IPR037278 ARFGAP/RecO-like zinc finger CLM98_07515 IPR003717 Recombination protein O, RecO CLM98_07525 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CLM98_07525 IPR012340 Nucleic acid-binding, OB-fold CLM98_07525 IPR030391 RNA methyltransferase TrmA, conserved site CLM98_07525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_07525 IPR030390 RNA methyltransferase TrmA, active site CLM98_07525 IPR010280 (Uracil-5)-methyltransferase family CLM98_07525 IPR002792 TRAM domain CLM98_07535 IPR036249 Thioredoxin-like superfamily CLM98_07535 IPR001853 DSBA-like thioredoxin domain CLM98_07540 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_07540 IPR034721 Bacterial renalase CLM98_07540 IPR002937 Amine oxidase CLM98_07545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07545 IPR007357 Deoxyribodipyrimidine photolyase-related protein CLM98_07545 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CLM98_07550 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_07550 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_07550 IPR019800 Glycoside hydrolase, family 3, active site CLM98_07550 IPR022956 Beta-hexosaminidase, bacterial CLM98_07550 IPR017853 Glycoside hydrolase superfamily CLM98_07560 IPR018099 Purine phosphorylase, family 2, conserved site CLM98_07560 IPR000845 Nucleoside phosphorylase domain CLM98_07560 IPR010044 Methylthioadenosine phosphorylase (MTAP) CLM98_07560 IPR035994 Nucleoside phosphorylase superfamily CLM98_07565 IPR019844 Cold-shock (CSD) domain CLM98_07565 IPR002059 Cold-shock protein, DNA-binding CLM98_07565 IPR012340 Nucleic acid-binding, OB-fold CLM98_07565 IPR011129 Cold shock domain CLM98_07565 IPR012156 Cold shock, CspA CLM98_07570 IPR027545 Kynurenine 3-monooxygenase CLM98_07570 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_07570 IPR002938 FAD-binding domain CLM98_07580 IPR003593 AAA+ ATPase domain CLM98_07580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07580 IPR001650 Helicase, C-terminal CLM98_07580 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_07580 IPR011545 DEAD/DEAH box helicase domain CLM98_07580 IPR013701 DEAD/H associated CLM98_07585 IPR012310 DNA ligase, ATP-dependent, central CLM98_07585 IPR016059 DNA ligase, ATP-dependent, conserved site CLM98_07585 IPR012308 DNA ligase, ATP-dependent, N-terminal CLM98_07585 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily CLM98_07585 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal CLM98_07585 IPR000977 DNA ligase, ATP-dependent CLM98_07585 IPR012309 DNA ligase, ATP-dependent, C-terminal CLM98_07585 IPR012340 Nucleic acid-binding, OB-fold CLM98_07595 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_07595 IPR000977 DNA ligase, ATP-dependent CLM98_07595 IPR012309 DNA ligase, ATP-dependent, C-terminal CLM98_07595 IPR016059 DNA ligase, ATP-dependent, conserved site CLM98_07595 IPR012340 Nucleic acid-binding, OB-fold CLM98_07595 IPR012308 DNA ligase, ATP-dependent, N-terminal CLM98_07595 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily CLM98_07595 IPR012310 DNA ligase, ATP-dependent, central CLM98_07610 IPR011006 CheY-like superfamily CLM98_07610 IPR000160 GGDEF domain CLM98_07610 IPR029787 Nucleotide cyclase CLM98_07610 IPR001789 Signal transduction response regulator, receiver domain CLM98_07630 IPR020610 Thiolase, active site CLM98_07630 IPR002155 Thiolase CLM98_07630 IPR016039 Thiolase-like CLM98_07630 IPR020613 Thiolase, conserved site CLM98_07630 IPR020616 Thiolase, N-terminal CLM98_07630 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_07630 IPR020617 Thiolase, C-terminal CLM98_07635 IPR011050 Pectin lyase fold/virulence factor CLM98_07635 IPR036709 Autotransporter beta-domain superfamily CLM98_07635 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_07635 IPR005546 Autotransporter beta-domain CLM98_07635 IPR000209 Peptidase S8/S53 domain CLM98_07635 IPR034061 Autotransporter serine protease peptidase domain CLM98_07635 IPR013425 Autotransporter-associated beta strand repeat CLM98_07635 IPR006315 Outer membrane autotransporter barrel CLM98_07635 IPR015500 Peptidase S8, subtilisin-related CLM98_07635 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_07635 IPR036852 Peptidase S8/S53 domain superfamily CLM98_07640 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CLM98_07640 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal CLM98_07640 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CLM98_07640 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CLM98_07640 IPR036291 NAD(P)-binding domain superfamily CLM98_07640 IPR033524 Leu/Phe/Val dehydrogenases active site CLM98_07655 IPR002725 Protein of unknown function DUF45 CLM98_07660 IPR009760 Protein of unknown function DUF1328 CLM98_07670 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CLM98_07670 IPR000962 Zinc finger, DksA/TraR C4-type CLM98_07670 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CLM98_07685 IPR004753 Cell shape determining protein MreB CLM98_07690 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLM98_07700 IPR013988 PhnA protein, C-terminal CLM98_07700 IPR004624 PhnA protein CLM98_07700 IPR013987 PhnA protein, N-terminal CLM98_07710 IPR013785 Aldolase-type TIM barrel CLM98_07710 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_07715 IPR011701 Major facilitator superfamily CLM98_07715 IPR020846 Major facilitator superfamily domain CLM98_07715 IPR036259 MFS transporter superfamily CLM98_07750 IPR016181 Acyl-CoA N-acyltransferase CLM98_07750 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CLM98_07750 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CLM98_07760 IPR035959 RutC-like superfamily CLM98_07760 IPR006175 YjgF/YER057c/UK114 family CLM98_07760 IPR035709 RutC family, YoaB-like CLM98_07760 IPR019897 RidA, conserved site CLM98_07765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_07765 IPR003333 Mycolic acid cyclopropane synthase CLM98_07780 IPR003333 Mycolic acid cyclopropane synthase CLM98_07780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_07805 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_07805 IPR013325 RNA polymerase sigma factor, region 2 CLM98_07805 IPR007630 RNA polymerase sigma-70 region 4 CLM98_07805 IPR007627 RNA polymerase sigma-70 region 2 CLM98_07805 IPR014284 RNA polymerase sigma-70 like domain CLM98_07805 IPR039425 RNA polymerase sigma-70 like CLM98_07805 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_07825 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CLM98_07825 IPR007202 4Fe-4S domain CLM98_07825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_07825 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_07825 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CLM98_07835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07835 IPR002547 tRNA-binding domain CLM98_07835 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_07835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_07835 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CLM98_07835 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CLM98_07835 IPR023458 Methionine-tRNA ligase, type 1 CLM98_07835 IPR014758 Methionyl-tRNA synthetase CLM98_07835 IPR015413 Methionyl/Leucyl tRNA synthetase CLM98_07835 IPR012340 Nucleic acid-binding, OB-fold CLM98_07835 IPR029038 Methionyl-tRNA synthetase, Zn-domain CLM98_07835 IPR033911 Methioninyl-tRNA synthetase core domain CLM98_07850 IPR003593 AAA+ ATPase domain CLM98_07850 IPR003439 ABC transporter-like CLM98_07850 IPR017871 ABC transporter, conserved site CLM98_07850 IPR025302 Domain of unknown function DUF4162 CLM98_07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07855 IPR037523 Vicinal oxygen chelate (VOC) domain CLM98_07855 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_07855 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_07855 IPR037478 YwkD-like domain CLM98_07860 IPR004841 Amino acid permease/ SLC12A domain CLM98_07860 IPR004840 Amino acid permease, conserved site CLM98_07865 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT CLM98_07865 IPR036589 Homocysteine-binding domain superfamily CLM98_07865 IPR003726 Homocysteine-binding domain CLM98_07875 IPR003744 Queuosine precursor transporter CLM98_07895 IPR005149 Transcription regulator PadR, N-terminal CLM98_07895 IPR011991 ArsR-like helix-turn-helix domain CLM98_07895 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_07895 IPR036390 Winged helix DNA-binding domain superfamily CLM98_07930 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CLM98_07930 IPR029045 ClpP/crotonase-like domain superfamily CLM98_07930 IPR001095 Acetyl-CoA carboxylase, alpha subunit CLM98_07935 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLM98_07935 IPR040982 DNA polymerase III alpha subunit finger domain CLM98_07935 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CLM98_07935 IPR029460 DNA polymerase, helix-hairpin-helix motif CLM98_07935 IPR016195 Polymerase/histidinol phosphatase-like CLM98_07935 IPR012340 Nucleic acid-binding, OB-fold CLM98_07935 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLM98_07935 IPR004013 PHP domain CLM98_07935 IPR004805 DNA polymerase III, alpha subunit CLM98_07935 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_07940 IPR012337 Ribonuclease H-like superfamily CLM98_07940 IPR001352 Ribonuclease HII/HIII CLM98_07940 IPR024567 Ribonuclease HII/HIII domain CLM98_07940 IPR036397 Ribonuclease H superfamily CLM98_07940 IPR022898 Ribonuclease HII CLM98_07945 IPR003835 Glycosyl transferase, family 19 CLM98_07950 IPR011004 Trimeric LpxA-like superfamily CLM98_07950 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CLM98_07950 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CLM98_07950 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CLM98_07950 IPR001451 Hexapeptide repeat CLM98_07955 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_07955 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CLM98_07955 IPR029069 HotDog domain superfamily CLM98_07960 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CLM98_07960 IPR011004 Trimeric LpxA-like superfamily CLM98_07960 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CLM98_07960 IPR001451 Hexapeptide repeat CLM98_07970 IPR039910 Surface antigen D15-like CLM98_07970 IPR034746 POTRA domain CLM98_07970 IPR023707 Outer membrane protein assembly factor BamA CLM98_07970 IPR010827 POTRA domain, BamA/TamA-like CLM98_07970 IPR000184 Bacterial surface antigen (D15) CLM98_07975 IPR008915 Peptidase M50 CLM98_07975 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CLM98_07975 IPR036034 PDZ superfamily CLM98_07975 IPR041489 PDZ domain 6 CLM98_07975 IPR001478 PDZ domain CLM98_07980 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CLM98_07980 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLM98_07980 IPR026877 DXP reductoisomerase C-terminal domain CLM98_07980 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CLM98_07980 IPR036291 NAD(P)-binding domain superfamily CLM98_07980 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CLM98_07985 IPR000374 Phosphatidate cytidylyltransferase CLM98_07990 IPR036424 Decaprenyl diphosphate synthase-like superfamily CLM98_07990 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CLM98_07990 IPR001441 Decaprenyl diphosphate synthase-like CLM98_07995 IPR002661 Ribosome recycling factor CLM98_07995 IPR036191 RRF superfamily CLM98_07995 IPR023584 Ribosome recycling factor domain CLM98_08000 IPR011817 Uridylate kinase CLM98_08000 IPR015963 Uridylate kinase, bacteria CLM98_08000 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_08000 IPR036393 Acetylglutamate kinase-like superfamily CLM98_08005 IPR000160 GGDEF domain CLM98_08005 IPR011006 CheY-like superfamily CLM98_08005 IPR001789 Signal transduction response regulator, receiver domain CLM98_08005 IPR029787 Nucleotide cyclase CLM98_08010 IPR036402 Elongation factor Ts, dimerisation domain superfamily CLM98_08010 IPR001816 Translation elongation factor EFTs/EF1B CLM98_08010 IPR018101 Translation elongation factor Ts, conserved site CLM98_08010 IPR009060 UBA-like superfamily CLM98_08010 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CLM98_08015 IPR018130 Ribosomal protein S2, conserved site CLM98_08015 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CLM98_08015 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CLM98_08015 IPR001865 Ribosomal protein S2 CLM98_08050 IPR000994 Peptidase M24 CLM98_08050 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_08050 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLM98_08050 IPR036005 Creatinase/aminopeptidase-like CLM98_08055 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CLM98_08055 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLM98_08055 IPR002934 Polymerase, nucleotidyl transferase domain CLM98_08055 IPR002912 ACT domain CLM98_08055 IPR003607 HD/PDEase domain CLM98_08055 IPR006674 HD domain CLM98_08060 IPR011004 Trimeric LpxA-like superfamily CLM98_08060 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CLM98_08060 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CLM98_08060 IPR001451 Hexapeptide repeat CLM98_08060 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CLM98_08065 IPR036249 Thioredoxin-like superfamily CLM98_08065 IPR006504 Transcriptional regulator Spx/MgsR CLM98_08065 IPR006660 Arsenate reductase-like CLM98_08070 IPR011650 Peptidase M20, dimerisation domain CLM98_08070 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLM98_08070 IPR036264 Bacterial exopeptidase dimerisation domain CLM98_08070 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CLM98_08070 IPR002933 Peptidase M20 CLM98_08080 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_08080 IPR017932 Glutamine amidotransferase type 2 domain CLM98_08080 IPR033738 Asparagine synthase, N-terminal domain CLM98_08080 IPR001962 Asparagine synthase CLM98_08080 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_08080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08090 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_08090 IPR012910 TonB-dependent receptor, plug domain CLM98_08090 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_08090 IPR010105 TonB-dependent siderophore receptor CLM98_08090 IPR030148 Catecholate siderophore receptor Fiu CLM98_08090 IPR039423 TonB-dependent receptor-like CLM98_08090 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_08105 IPR009078 Ferritin-like superfamily CLM98_08105 IPR009040 Ferritin-like diiron domain CLM98_08105 IPR012347 Ferritin-like CLM98_08105 IPR002024 Bacterioferritin CLM98_08105 IPR008331 Ferritin/DPS protein domain CLM98_08110 IPR008854 TPMT family CLM98_08110 IPR025835 Thiopurine S-methyltransferase CLM98_08110 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification CLM98_08110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_08120 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLM98_08120 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLM98_08120 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CLM98_08120 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLM98_08120 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLM98_08120 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CLM98_08120 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CLM98_08135 IPR003423 Outer membrane efflux protein CLM98_08135 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_08140 IPR005694 Efflux pump membrane protein CLM98_08140 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_08145 IPR036259 MFS transporter superfamily CLM98_08145 IPR004638 Drug resistance transporter EmrB-like CLM98_08145 IPR011701 Major facilitator superfamily CLM98_08145 IPR020846 Major facilitator superfamily domain CLM98_08155 IPR026891 Fibronectin type III-like domain CLM98_08155 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_08155 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_08155 IPR017853 Glycoside hydrolase superfamily CLM98_08155 IPR013783 Immunoglobulin-like fold CLM98_08155 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CLM98_08155 IPR019800 Glycoside hydrolase, family 3, active site CLM98_08155 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_08165 IPR005279 Dipeptide/tripeptide permease CLM98_08165 IPR036259 MFS transporter superfamily CLM98_08165 IPR020846 Major facilitator superfamily domain CLM98_08165 IPR000109 Proton-dependent oligopeptide transporter family CLM98_08165 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CLM98_08190 IPR000835 MarR-type HTH domain CLM98_08190 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08190 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08190 IPR023187 Transcriptional regulator MarR-type, conserved site CLM98_08195 IPR001567 Peptidase M3A/M3B catalytic domain CLM98_08195 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_08205 IPR029760 Glutathione peroxidase conserved site CLM98_08205 IPR029759 Glutathione peroxidase active site CLM98_08205 IPR036249 Thioredoxin-like superfamily CLM98_08205 IPR000889 Glutathione peroxidase CLM98_08210 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_08210 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_08210 IPR033892 Ferredoxin--NADP reductase, bacteria CLM98_08210 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_08210 IPR017938 Riboflavin synthase-like beta-barrel CLM98_08210 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_08210 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLM98_08215 IPR039421 Type I protein exporter CLM98_08215 IPR003439 ABC transporter-like CLM98_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08215 IPR003593 AAA+ ATPase domain CLM98_08215 IPR011527 ABC transporter type 1, transmembrane domain CLM98_08215 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_08215 IPR017871 ABC transporter, conserved site CLM98_08220 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CLM98_08220 IPR011167 Iron-dependent fumarate hydratase CLM98_08220 IPR020557 Fumarate lyase, conserved site CLM98_08220 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CLM98_08220 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CLM98_08230 IPR036874 Carbonic anhydrase superfamily CLM98_08230 IPR001765 Carbonic anhydrase CLM98_08230 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08235 IPR036541 Phospholipase A1 superfamily CLM98_08235 IPR003187 Phospholipase A1 CLM98_08245 IPR012340 Nucleic acid-binding, OB-fold CLM98_08245 IPR002059 Cold-shock protein, DNA-binding CLM98_08245 IPR019844 Cold-shock (CSD) domain CLM98_08245 IPR011129 Cold shock domain CLM98_08245 IPR012156 Cold shock, CspA CLM98_08260 IPR035985 Ubiquitin-activating enzyme CLM98_08260 IPR000594 THIF-type NAD/FAD binding fold CLM98_08280 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_08280 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_08280 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_08280 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_08280 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_08280 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_08280 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08290 IPR036249 Thioredoxin-like superfamily CLM98_08290 IPR004046 Glutathione S-transferase, C-terminal CLM98_08290 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_08290 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_08290 IPR004045 Glutathione S-transferase, N-terminal CLM98_08300 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_08300 IPR001962 Asparagine synthase CLM98_08300 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_08300 IPR017932 Glutamine amidotransferase type 2 domain CLM98_08300 IPR033738 Asparagine synthase, N-terminal domain CLM98_08305 IPR005025 NADPH-dependent FMN reductase-like CLM98_08305 IPR029039 Flavoprotein-like superfamily CLM98_08310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08310 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLM98_08310 IPR007693 DNA helicase, DnaB-like, N-terminal CLM98_08310 IPR007694 DNA helicase, DnaB-like, C-terminal CLM98_08310 IPR007692 DNA helicase, DnaB type CLM98_08310 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CLM98_08310 IPR003593 AAA+ ATPase domain CLM98_08315 IPR002081 Cryptochrome/DNA photolyase class 1 CLM98_08315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08315 IPR006050 DNA photolyase, N-terminal CLM98_08315 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CLM98_08315 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CLM98_08315 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CLM98_08315 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CLM98_08325 IPR028974 TSP type-3 repeat CLM98_08325 IPR006665 OmpA-like domain CLM98_08325 IPR006690 Outer membrane protein, OmpA-like, conserved site CLM98_08325 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLM98_08325 IPR036737 OmpA-like domain superfamily CLM98_08325 IPR008722 Outer membrane porin F, N-terminal CLM98_08325 IPR006664 Outer membrane protein, bacterial CLM98_08330 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08330 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08330 IPR000847 Transcription regulator HTH, LysR CLM98_08330 IPR005119 LysR, substrate-binding CLM98_08345 IPR006143 RND efflux pump, membrane fusion protein CLM98_08345 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_08350 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_08350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_08350 IPR001036 Acriflavin resistance protein CLM98_08355 IPR036291 NAD(P)-binding domain superfamily CLM98_08355 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_08355 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_08360 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_08360 IPR003423 Outer membrane efflux protein CLM98_08365 IPR035965 PAS domain superfamily CLM98_08365 IPR013656 PAS fold-4 CLM98_08365 IPR000014 PAS domain CLM98_08365 IPR029787 Nucleotide cyclase CLM98_08365 IPR000160 GGDEF domain CLM98_08365 IPR000700 PAS-associated, C-terminal CLM98_08375 IPR000160 GGDEF domain CLM98_08375 IPR029787 Nucleotide cyclase CLM98_08495 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_08495 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_08495 IPR015500 Peptidase S8, subtilisin-related CLM98_08495 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_08495 IPR036852 Peptidase S8/S53 domain superfamily CLM98_08495 IPR000209 Peptidase S8/S53 domain CLM98_08500 IPR020081 SsrA-binding protein, conserved site CLM98_08500 IPR000037 SsrA-binding protein CLM98_08500 IPR023620 Small protein B CLM98_08505 IPR005031 Coenzyme Q-binding protein COQ10, START domain CLM98_08505 IPR023393 START-like domain superfamily CLM98_08510 IPR037021 RnfH superfamily CLM98_08510 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLM98_08510 IPR005346 RnfH protein CLM98_08515 IPR037873 BamE-like CLM98_08515 IPR007450 Lipoprotein SmpA/OmlA CLM98_08515 IPR026592 Outer membrane protein assembly factor BamE CLM98_08520 IPR002481 Ferric-uptake regulator CLM98_08520 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08520 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08525 IPR004604 DNA recombination/repair protein RecN CLM98_08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08525 IPR003395 RecF/RecN/SMC, N-terminal CLM98_08530 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CLM98_08530 IPR002571 Heat-inducible transcription repressor HrcA CLM98_08530 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CLM98_08530 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08530 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08530 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain CLM98_08530 IPR029016 GAF-like domain superfamily CLM98_08535 IPR009012 GrpE nucleotide exchange factor, head CLM98_08535 IPR013805 GrpE nucleotide exchange factor, coiled-coil CLM98_08535 IPR000740 GrpE nucleotide exchange factor CLM98_08540 IPR018181 Heat shock protein 70, conserved site CLM98_08540 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CLM98_08540 IPR012725 Chaperone DnaK CLM98_08540 IPR013126 Heat shock protein 70 family CLM98_08540 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CLM98_08545 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CLM98_08545 IPR008971 HSP40/DnaJ peptide-binding CLM98_08545 IPR001623 DnaJ domain CLM98_08545 IPR002939 Chaperone DnaJ, C-terminal CLM98_08545 IPR012724 Chaperone DnaJ CLM98_08545 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CLM98_08545 IPR036869 Chaperone J-domain superfamily CLM98_08555 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase CLM98_08555 IPR029056 Ribokinase-like CLM98_08555 IPR004625 Pyridoxine kinase CLM98_08555 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLM98_08580 IPR010132 ATPase, type I secretion system, HlyB CLM98_08580 IPR017871 ABC transporter, conserved site CLM98_08580 IPR003439 ABC transporter-like CLM98_08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08580 IPR005074 Peptidase C39, bacteriocin processing CLM98_08580 IPR039395 Peptidase C39-like A CLM98_08580 IPR003593 AAA+ ATPase domain CLM98_08580 IPR011527 ABC transporter type 1, transmembrane domain CLM98_08580 IPR039421 Type I protein exporter CLM98_08580 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_08585 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08585 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08585 IPR000847 Transcription regulator HTH, LysR CLM98_08585 IPR005119 LysR, substrate-binding CLM98_08590 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_08590 IPR011527 ABC transporter type 1, transmembrane domain CLM98_08590 IPR003593 AAA+ ATPase domain CLM98_08590 IPR003439 ABC transporter-like CLM98_08590 IPR017871 ABC transporter, conserved site CLM98_08590 IPR039421 Type I protein exporter CLM98_08590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08590 IPR011917 ABC transporter, lipid A export, MsbA CLM98_08595 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_08595 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLM98_08595 IPR036956 Impact, N-terminal domain superfamily CLM98_08595 IPR001498 Impact, N-terminal CLM98_08595 IPR023582 Impact family CLM98_08595 IPR035647 EF-G domain III/V-like CLM98_08600 IPR031100 LOG family CLM98_08600 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CLM98_08605 IPR006258 Dihydrolipoamide dehydrogenase CLM98_08605 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLM98_08605 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLM98_08605 IPR023753 FAD/NAD(P)-binding domain CLM98_08605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_08605 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_08605 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_08610 IPR006255 Dihydrolipoamide succinyltransferase CLM98_08610 IPR011053 Single hybrid motif CLM98_08610 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_08610 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_08610 IPR004167 Peripheral subunit-binding domain CLM98_08610 IPR036625 E3-binding domain superfamily CLM98_08610 IPR000089 Biotin/lipoyl attachment CLM98_08610 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_08615 IPR029061 Thiamin diphosphate-binding fold CLM98_08615 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CLM98_08615 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_08615 IPR001017 Dehydrogenase, E1 component CLM98_08615 IPR011603 2-oxoglutarate dehydrogenase E1 component CLM98_08615 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CLM98_08615 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CLM98_08625 IPR039994 JmjC domain-containing CLM98_08625 IPR003347 JmjC domain CLM98_08635 IPR024083 Fumarase/histidase, N-terminal CLM98_08635 IPR020557 Fumarate lyase, conserved site CLM98_08635 IPR000362 Fumarate lyase family CLM98_08635 IPR022761 Fumarate lyase, N-terminal CLM98_08635 IPR008948 L-Aspartase-like CLM98_08635 IPR004769 Adenylosuccinate lyase CLM98_08635 IPR013539 Adenylosuccinate lyase PurB, C-terminal CLM98_08645 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_08645 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_08645 IPR005170 Transporter-associated domain CLM98_08645 IPR000644 CBS domain CLM98_08645 IPR002550 CNNM, transmembrane domain CLM98_08650 IPR005677 Fumarate hydratase, class II CLM98_08650 IPR020557 Fumarate lyase, conserved site CLM98_08650 IPR008948 L-Aspartase-like CLM98_08650 IPR022761 Fumarate lyase, N-terminal CLM98_08650 IPR018951 Fumarase C, C-terminal CLM98_08650 IPR024083 Fumarase/histidase, N-terminal CLM98_08650 IPR000362 Fumarate lyase family CLM98_08675 IPR003593 AAA+ ATPase domain CLM98_08675 IPR003439 ABC transporter-like CLM98_08675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08680 IPR000524 Transcription regulator HTH, GntR CLM98_08680 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_08680 IPR036390 Winged helix DNA-binding domain superfamily CLM98_08690 IPR000889 Glutathione peroxidase CLM98_08690 IPR029760 Glutathione peroxidase conserved site CLM98_08690 IPR029759 Glutathione peroxidase active site CLM98_08690 IPR036249 Thioredoxin-like superfamily CLM98_08695 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLM98_08695 IPR008104 Macrophage infectivity potentiator CLM98_08695 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CLM98_08695 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CLM98_08700 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_08700 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CLM98_08700 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_08700 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CLM98_08700 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_08700 IPR036291 NAD(P)-binding domain superfamily CLM98_08700 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_08700 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_08705 IPR007236 SlyX CLM98_08720 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_08720 IPR023588 Transcription regulator HTH, PurR CLM98_08720 IPR028082 Periplasmic binding protein-like I CLM98_08720 IPR000843 LacI-type HTH domain CLM98_08725 IPR005964 Bacterial glucose/galactose transporter CLM98_08725 IPR011701 Major facilitator superfamily CLM98_08725 IPR036259 MFS transporter superfamily CLM98_08730 IPR029056 Ribokinase-like CLM98_08730 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_08730 IPR011611 Carbohydrate kinase PfkB CLM98_08730 IPR002139 Ribokinase/fructokinase CLM98_08740 IPR036594 Methionine synthase domain CLM98_08740 IPR011822 Cobalamin-dependent methionine synthase CLM98_08740 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLM98_08740 IPR000489 Pterin-binding domain CLM98_08740 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CLM98_08740 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CLM98_08740 IPR033706 Methionine synthase, B12-binding domain CLM98_08740 IPR036589 Homocysteine-binding domain superfamily CLM98_08740 IPR003726 Homocysteine-binding domain CLM98_08740 IPR011005 Dihydropteroate synthase-like CLM98_08740 IPR036724 Cobalamin-binding domain superfamily CLM98_08740 IPR006158 Cobalamin (vitamin B12)-binding domain CLM98_08745 IPR003726 Homocysteine-binding domain CLM98_08745 IPR011005 Dihydropteroate synthase-like CLM98_08745 IPR036589 Homocysteine-binding domain superfamily CLM98_08745 IPR000489 Pterin-binding domain CLM98_08750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_08750 IPR004033 UbiE/COQ5 methyltransferase CLM98_08750 IPR023576 UbiE/COQ5 methyltransferase, conserved site CLM98_08755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_08755 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_08755 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_08755 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_08755 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_08755 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08755 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_08760 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_08760 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_08760 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_08760 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_08760 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_08760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08760 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_08780 IPR011805 Ribonuclease R CLM98_08780 IPR004476 Ribonuclease II/ribonuclease R CLM98_08780 IPR022966 Ribonuclease II/R, conserved site CLM98_08780 IPR001900 Ribonuclease II/R CLM98_08780 IPR013223 Ribonuclease B, N-terminal OB domain CLM98_08780 IPR012340 Nucleic acid-binding, OB-fold CLM98_08780 IPR022967 RNA-binding domain, S1 CLM98_08780 IPR003029 S1 domain CLM98_08780 IPR013668 Ribonuclease R winged-helix domain CLM98_08780 IPR040476 RNase II/RNase R, cold shock domain CLM98_08780 IPR011129 Cold shock domain CLM98_08790 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CLM98_08790 IPR029028 Alpha/beta knot methyltransferases CLM98_08790 IPR029064 50S ribosomal protein L30e-like CLM98_08790 IPR004441 RNA methyltransferase TrmH family CLM98_08790 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_08790 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLM98_08790 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_08800 IPR000160 GGDEF domain CLM98_08800 IPR029787 Nucleotide cyclase CLM98_08800 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLM98_08805 IPR012337 Ribonuclease H-like superfamily CLM98_08805 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_08805 IPR005987 Ribonuclease T CLM98_08805 IPR036397 Ribonuclease H superfamily CLM98_08815 IPR028366 Phosphate transport system protein PhoU CLM98_08815 IPR038078 PhoU-like domain superfamily CLM98_08815 IPR026022 PhoU domain CLM98_08820 IPR003439 ABC transporter-like CLM98_08820 IPR017871 ABC transporter, conserved site CLM98_08820 IPR003593 AAA+ ATPase domain CLM98_08820 IPR005670 Phosphate transport system permease protein 1 CLM98_08820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08820 IPR015850 ABC transporter, phosphate import, PstB CLM98_08825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_08825 IPR035906 MetI-like superfamily CLM98_08825 IPR005672 Phosphate transport system permease protein PstA CLM98_08830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_08830 IPR011864 Phosphate ABC transporter, permease protein PstC CLM98_08830 IPR035906 MetI-like superfamily CLM98_08835 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CLM98_08835 IPR024370 PBP domain CLM98_08840 IPR024370 PBP domain CLM98_08840 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CLM98_08855 IPR001765 Carbonic anhydrase CLM98_08855 IPR036874 Carbonic anhydrase superfamily CLM98_08855 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08860 IPR011547 SLC26A/SulP transporter domain CLM98_08860 IPR001902 SLC26A/SulP transporter CLM98_08860 IPR002645 STAS domain CLM98_08860 IPR036513 STAS domain superfamily CLM98_08865 IPR005759 Endonuclease III CLM98_08865 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLM98_08865 IPR011257 DNA glycosylase CLM98_08865 IPR004035 Endonuclease III, iron-sulphur binding site CLM98_08865 IPR000445 Helix-hairpin-helix motif CLM98_08865 IPR003265 HhH-GPD domain CLM98_08865 IPR004036 Endonuclease III-like, conserved site-2 CLM98_08865 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLM98_08875 IPR014748 Enoyl-CoA hydratase, C-terminal CLM98_08875 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_08875 IPR029045 ClpP/crotonase-like domain superfamily CLM98_08875 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_08880 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLM98_08880 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CLM98_08880 IPR008104 Macrophage infectivity potentiator CLM98_08880 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CLM98_08885 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_08885 IPR000086 NUDIX hydrolase domain CLM98_08885 IPR023735 Uncharacterised nudix hydrolase NudL CLM98_08885 IPR000059 NUDIX hydrolase, NudL, conserved site CLM98_08890 IPR036873 Rhodanese-like domain superfamily CLM98_08890 IPR001763 Rhodanese-like domain CLM98_08930 IPR019614 S-adenosylmethionine-dependent methyltransferase CLM98_08930 IPR000241 Putative RNA methylase domain CLM98_08930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_08930 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CLM98_08930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_08930 IPR004114 THUMP domain CLM98_08935 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CLM98_08935 IPR002504 NAD kinase CLM98_08935 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CLM98_08935 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CLM98_08960 IPR012337 Ribonuclease H-like superfamily CLM98_08960 IPR036397 Ribonuclease H superfamily CLM98_08960 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_08960 IPR034748 Exonuclease I, C-terminal alpha-helical domain CLM98_08960 IPR023607 Exodeoxyribonuclease I CLM98_08960 IPR038649 Exonuclease I, SH3-like domain superfamily CLM98_08960 IPR013620 Exodeoxyribonuclease I, C-terminal CLM98_08960 IPR034747 Exonuclease I, SH3-like domain CLM98_08970 IPR002938 FAD-binding domain CLM98_08970 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_08970 IPR027545 Kynurenine 3-monooxygenase CLM98_08975 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_08975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_08975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_08975 IPR000192 Aminotransferase class V domain CLM98_08975 IPR010111 Kynureninase CLM98_08985 IPR010329 3-hydroxyanthranilic acid dioxygenase CLM98_08985 IPR014710 RmlC-like jelly roll fold CLM98_08985 IPR011051 RmlC-like cupin domain superfamily CLM98_08990 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08990 IPR036874 Carbonic anhydrase superfamily CLM98_08990 IPR001765 Carbonic anhydrase CLM98_09035 IPR011006 CheY-like superfamily CLM98_09035 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_09035 IPR001789 Signal transduction response regulator, receiver domain CLM98_09035 IPR000792 Transcription regulator LuxR, C-terminal CLM98_09055 IPR012349 FMN-binding split barrel CLM98_09055 IPR007396 Transcriptional regulator PAI 2-type CLM98_09075 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLM98_09075 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_09075 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_09075 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_09075 IPR012340 Nucleic acid-binding, OB-fold CLM98_09075 IPR004522 Asparagine-tRNA ligase CLM98_09085 IPR000361 FeS cluster biogenesis CLM98_09085 IPR016092 FeS cluster insertion protein CLM98_09085 IPR017870 FeS cluster insertion, C-terminal, conserved site CLM98_09085 IPR035903 HesB-like domain superfamily CLM98_09090 IPR035980 Ribosomal protein S6 superfamily CLM98_09090 IPR020814 Ribosomal protein S6, plastid/chloroplast CLM98_09090 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLM98_09090 IPR000529 Ribosomal protein S6 CLM98_09095 IPR001648 Ribosomal protein S18 CLM98_09095 IPR018275 Ribosomal protein S18, conserved site CLM98_09095 IPR036870 Ribosomal protein S18 superfamily CLM98_09100 IPR000244 Ribosomal protein L9 CLM98_09100 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CLM98_09100 IPR020070 Ribosomal protein L9, N-terminal CLM98_09100 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CLM98_09100 IPR020069 Ribosomal protein L9, C-terminal CLM98_09100 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLM98_09100 IPR020594 Ribosomal protein L9, bacteria/chloroplast CLM98_09105 IPR010935 SMCs flexible hinge CLM98_09105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09105 IPR003395 RecF/RecN/SMC, N-terminal CLM98_09105 IPR024704 Structural maintenance of chromosomes protein CLM98_09105 IPR036277 SMCs flexible hinge superfamily CLM98_09105 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CLM98_09110 IPR011919 Cell division protein ZipA CLM98_09110 IPR007449 ZipA, C-terminal FtsZ-binding domain CLM98_09110 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily CLM98_09120 IPR005861 Histidinol-phosphate aminotransferase family CLM98_09120 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CLM98_09120 IPR004839 Aminotransferase, class I/classII CLM98_09120 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_09120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_09125 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CLM98_09125 IPR004150 NAD-dependent DNA ligase, OB-fold CLM98_09125 IPR013839 NAD-dependent DNA ligase, adenylation CLM98_09125 IPR001679 NAD-dependent DNA ligase CLM98_09125 IPR036420 BRCT domain superfamily CLM98_09125 IPR001357 BRCT domain CLM98_09125 IPR012340 Nucleic acid-binding, OB-fold CLM98_09125 IPR010994 RuvA domain 2-like CLM98_09125 IPR018239 NAD-dependent DNA ligase, active site CLM98_09125 IPR041663 DisA/LigA, helix-hairpin-helix motif CLM98_09125 IPR013840 NAD-dependent DNA ligase, N-terminal CLM98_09130 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_09130 IPR004525 Elongation factor P--(R)-beta-lysine ligase CLM98_09130 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLM98_09130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_09145 IPR000649 Initiation factor 2B-related CLM98_09145 IPR011559 Initiation factor 2B alpha/beta/delta CLM98_09145 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal CLM98_09145 IPR037171 NagB/RpiA transferase-like CLM98_09145 IPR005251 Methylthioribose-1-phosphate isomerase CLM98_09150 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLM98_09150 IPR005743 DNA gyrase, subunit A CLM98_09150 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLM98_09150 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLM98_09150 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CLM98_09150 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLM98_09150 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CLM98_09165 IPR023637 Urocanase CLM98_09165 IPR035401 Urocanase, C-terminal domain CLM98_09165 IPR038364 Urocanase, central domain superfamily CLM98_09165 IPR036190 Urocanase superfamily CLM98_09165 IPR035085 Urocanase, Rossmann-like domain CLM98_09165 IPR035400 Urocanase, N-terminal domain CLM98_09165 IPR023636 Urocanase conserved site CLM98_09175 IPR001106 Aromatic amino acid lyase CLM98_09175 IPR024083 Fumarase/histidase, N-terminal CLM98_09175 IPR005921 Histidine ammonia-lyase CLM98_09175 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CLM98_09175 IPR008948 L-Aspartase-like CLM98_09180 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLM98_09180 IPR032466 Metal-dependent hydrolase CLM98_09180 IPR005920 Imidazolonepropionase CLM98_09180 IPR013108 Amidohydrolase 3 CLM98_09195 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLM98_09195 IPR010248 Histidine utilization repressor CLM98_09195 IPR000524 Transcription regulator HTH, GntR CLM98_09195 IPR011663 UbiC transcription regulator-associated CLM98_09195 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09195 IPR036390 Winged helix DNA-binding domain superfamily CLM98_09225 IPR013130 Ferric reductase transmembrane component-like domain CLM98_09225 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CLM98_09230 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CLM98_09230 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CLM98_09230 IPR000572 Oxidoreductase, molybdopterin-binding domain CLM98_09235 IPR022278 Phosphoserine aminotransferase CLM98_09235 IPR000192 Aminotransferase class V domain CLM98_09235 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLM98_09235 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_09235 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_09235 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09240 IPR001086 Prephenate dehydratase CLM98_09240 IPR002912 ACT domain CLM98_09240 IPR036263 Chorismate mutase type II superfamily CLM98_09240 IPR036979 Chorismate mutase domain superfamily CLM98_09240 IPR002701 Chorismate mutase II, prokaryotic-type CLM98_09240 IPR018528 Prephenate dehydratase, conserved site CLM98_09240 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CLM98_09240 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CLM98_09245 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLM98_09245 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CLM98_09245 IPR001986 Enolpyruvate transferase domain CLM98_09245 IPR036968 Enolpyruvate transferase domain superfamily CLM98_09245 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CLM98_09255 IPR037682 TonB, C-terminal CLM98_09255 IPR006260 TonB/TolA, C-terminal CLM98_09260 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLM98_09260 IPR015866 Serine-tRNA synthetase, type1, N-terminal CLM98_09260 IPR033729 Serine-tRNA ligase catalytic core domain CLM98_09260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLM98_09260 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_09260 IPR002317 Serine-tRNA ligase, type1 CLM98_09260 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CLM98_09265 IPR023048 NADH-azoreductase, FMN-dependent CLM98_09265 IPR003680 Flavodoxin-like fold CLM98_09265 IPR029039 Flavoprotein-like superfamily CLM98_09270 IPR000847 Transcription regulator HTH, LysR CLM98_09270 IPR005119 LysR, substrate-binding CLM98_09270 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09270 IPR036390 Winged helix DNA-binding domain superfamily CLM98_09325 IPR003660 HAMP domain CLM98_09325 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_09325 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_09325 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_09325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_09325 IPR004090 Chemotaxis methyl-accepting receptor CLM98_09345 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_09345 IPR035965 PAS domain superfamily CLM98_09345 IPR005467 Histidine kinase domain CLM98_09345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_09345 IPR001789 Signal transduction response regulator, receiver domain CLM98_09345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_09345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_09345 IPR013656 PAS fold-4 CLM98_09345 IPR000014 PAS domain CLM98_09345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_09345 IPR011006 CheY-like superfamily CLM98_09350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_09350 IPR001789 Signal transduction response regulator, receiver domain CLM98_09350 IPR036641 HPT domain superfamily CLM98_09350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_09350 IPR019247 Histidine kinase BarA, N-terminal CLM98_09350 IPR011006 CheY-like superfamily CLM98_09350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_09350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_09350 IPR005467 Histidine kinase domain CLM98_09350 IPR003660 HAMP domain CLM98_09350 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_09350 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_09360 IPR003593 AAA+ ATPase domain CLM98_09360 IPR030665 Circadian clock protein kinase KaiC CLM98_09360 IPR014774 KaiC-like domain CLM98_09360 IPR010624 KaiC domain CLM98_09360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09365 IPR001610 PAC motif CLM98_09365 IPR011006 CheY-like superfamily CLM98_09365 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_09365 IPR000014 PAS domain CLM98_09365 IPR001789 Signal transduction response regulator, receiver domain CLM98_09365 IPR005467 Histidine kinase domain CLM98_09365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_09365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_09365 IPR035965 PAS domain superfamily CLM98_09365 IPR000700 PAS-associated, C-terminal CLM98_09365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_09365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_09375 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CLM98_09375 IPR005616 CcmH/CycL/Ccl2/NrfF family CLM98_09380 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLM98_09380 IPR013740 Redoxin CLM98_09380 IPR017937 Thioredoxin, conserved site CLM98_09380 IPR013766 Thioredoxin domain CLM98_09380 IPR036249 Thioredoxin-like superfamily CLM98_09385 IPR003568 Cytochrome c-type biogenesis protein CcmF CLM98_09385 IPR002541 Cytochrome c assembly protein CLM98_09385 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CLM98_09385 IPR003567 Cytochrome c-type biogenesis protein CLM98_09390 IPR004329 CcmE/CycJ protein CLM98_09390 IPR036127 CcmE-like superfamily CLM98_09400 IPR003557 Cytochrome c-type biogenesis protein CcmC CLM98_09400 IPR002541 Cytochrome c assembly protein CLM98_09405 IPR034084 Thermitase-like, domain CLM98_09405 IPR015500 Peptidase S8, subtilisin-related CLM98_09405 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_09405 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_09405 IPR000209 Peptidase S8/S53 domain CLM98_09405 IPR036852 Peptidase S8/S53 domain superfamily CLM98_09405 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_09415 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_09415 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09415 IPR039425 RNA polymerase sigma-70 like CLM98_09415 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLM98_09415 IPR007627 RNA polymerase sigma-70 region 2 CLM98_09415 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_09415 IPR014286 RNA polymerase sigma-70 RpoE type CLM98_09415 IPR014284 RNA polymerase sigma-70 like domain CLM98_09415 IPR013325 RNA polymerase sigma factor, region 2 CLM98_09430 IPR002327 Cytochrome c, class IA/ IB CLM98_09430 IPR036909 Cytochrome c-like domain superfamily CLM98_09430 IPR009056 Cytochrome c-like domain CLM98_09445 IPR008894 WxcM-like, C-terminal CLM98_09445 IPR011051 RmlC-like cupin domain superfamily CLM98_09445 IPR014710 RmlC-like jelly roll fold CLM98_09465 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09465 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_09465 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_09465 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLM98_09470 IPR032896 Lipid III flippase WzxE CLM98_09470 IPR002797 Polysaccharide biosynthesis protein CLM98_09475 IPR001173 Glycosyltransferase 2-like CLM98_09475 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_09490 IPR013216 Methyltransferase type 11 CLM98_09490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_09505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_09505 IPR004498 Ribosomal protein L11 methyltransferase CLM98_09515 IPR001296 Glycosyl transferase, family 1 CLM98_09515 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLM98_09515 IPR017814 Mycothiol biosynthesis protein, MshA CLM98_09530 IPR015854 ABC transporter, lipoprotein release, LolD CLM98_09530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09530 IPR011924 Lipoprotein releasing system, ATP-binding protein CLM98_09530 IPR003593 AAA+ ATPase domain CLM98_09530 IPR003439 ABC transporter-like CLM98_09530 IPR017871 ABC transporter, conserved site CLM98_09535 IPR039421 Type I protein exporter CLM98_09535 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_09535 IPR011527 ABC transporter type 1, transmembrane domain CLM98_09535 IPR011917 ABC transporter, lipid A export, MsbA CLM98_09535 IPR017871 ABC transporter, conserved site CLM98_09535 IPR003439 ABC transporter-like CLM98_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09535 IPR003593 AAA+ ATPase domain CLM98_09540 IPR011701 Major facilitator superfamily CLM98_09540 IPR020846 Major facilitator superfamily domain CLM98_09540 IPR005829 Sugar transporter, conserved site CLM98_09540 IPR036259 MFS transporter superfamily CLM98_09545 IPR011251 Luciferase-like domain CLM98_09545 IPR019949 Luciferase family oxidoreductase, group 1 CLM98_09545 IPR036661 Luciferase-like domain superfamily CLM98_09560 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_09560 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_09560 IPR002550 CNNM, transmembrane domain CLM98_09560 IPR005170 Transporter-associated domain CLM98_09560 IPR000644 CBS domain CLM98_09575 IPR001204 Phosphate transporter CLM98_09590 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_09590 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_09590 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_09590 IPR002288 DNA gyrase B subunit, C-terminal CLM98_09590 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLM98_09590 IPR018522 DNA topoisomerase, type IIA, conserved site CLM98_09590 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CLM98_09590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_09590 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLM98_09590 IPR006171 TOPRIM domain CLM98_09590 IPR001241 DNA topoisomerase, type IIA CLM98_09590 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CLM98_09600 IPR017926 Glutamine amidotransferase CLM98_09600 IPR017456 CTP synthase, N-terminal CLM98_09600 IPR033828 CTP synthase GATase domain CLM98_09600 IPR004468 CTP synthase CLM98_09600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09600 IPR029062 Class I glutamine amidotransferase-like CLM98_09605 IPR006269 3-deoxy-8-phosphooctulonate synthase CLM98_09605 IPR006218 DAHP synthetase I/KDSA CLM98_09605 IPR013785 Aldolase-type TIM barrel CLM98_09615 IPR020811 Enolase, N-terminal CLM98_09615 IPR000941 Enolase CLM98_09615 IPR020809 Enolase, conserved site CLM98_09615 IPR036849 Enolase-like, C-terminal domain superfamily CLM98_09615 IPR020810 Enolase, C-terminal TIM barrel domain CLM98_09615 IPR029017 Enolase-like, N-terminal CLM98_09620 IPR023081 Cell division protein FtsB CLM98_09620 IPR007060 Septum formation initiator FtsL/DivIC CLM98_09625 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_09625 IPR034683 Cytidylyltransferase IspD/TarI CLM98_09625 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CLM98_09625 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLM98_09630 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CLM98_09630 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CLM98_09630 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CLM98_09635 IPR042214 Pseudouridine synthase, TruD, catalytic domain CLM98_09635 IPR011760 Pseudouridine synthase, TruD, insertion domain CLM98_09635 IPR020119 Pseudouridine synthase TruD, conserved site CLM98_09635 IPR001656 Pseudouridine synthase, TruD CLM98_09635 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_09640 IPR002625 Smr domain CLM98_09640 IPR036063 Smr domain superfamily CLM98_09640 IPR022990 Uncharacterised protein family UPF0115 CLM98_09645 IPR030048 Survival protein SurE CLM98_09645 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CLM98_09645 IPR036523 SurE-like phosphatase/nucleotidase superfamily CLM98_09650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_09650 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CLM98_09655 IPR032816 SNARE associated Golgi protein CLM98_09660 IPR016047 Peptidase M23 CLM98_09660 IPR011055 Duplicated hybrid motif CLM98_09660 IPR018392 LysM domain CLM98_09660 IPR036779 LysM domain superfamily CLM98_09665 IPR007523 NDUFAF3/Mth938 domain-containing protein CLM98_09665 IPR036748 MTH938-like superfamily CLM98_09670 IPR035920 YhbY-like superfamily CLM98_09670 IPR017924 RNA-binding protein YhbY CLM98_09670 IPR001890 RNA-binding, CRM domain CLM98_09675 IPR015507 Ribosomal RNA large subunit methyltransferase E CLM98_09675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_09675 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLM98_09680 IPR000642 Peptidase M41 CLM98_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09680 IPR037219 Peptidase M41-like CLM98_09680 IPR005936 Peptidase, FtsH CLM98_09680 IPR003960 ATPase, AAA-type, conserved site CLM98_09680 IPR041569 AAA ATPase, AAA+ lid domain CLM98_09680 IPR003593 AAA+ ATPase domain CLM98_09680 IPR011546 Peptidase M41, FtsH extracellular CLM98_09680 IPR003959 ATPase, AAA-type, core CLM98_09685 IPR000489 Pterin-binding domain CLM98_09685 IPR011005 Dihydropteroate synthase-like CLM98_09685 IPR006390 Dihydropteroate synthase CLM98_09690 IPR018022 IPP transferase CLM98_09690 IPR039657 Dimethylallyltransferase CLM98_09690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09695 IPR010920 LSM domain superfamily CLM98_09695 IPR005001 RNA-binding protein Hfq CLM98_09700 IPR025121 GTPase HflX, N-terminal CLM98_09700 IPR035647 EF-G domain III/V-like CLM98_09700 IPR030394 HflX-type guanine nucleotide-binding (G) domain CLM98_09700 IPR032305 GTP-binding protein, middle domain CLM98_09700 IPR016496 GTPase HflX CLM98_09700 IPR042108 GTPase HflX, N-terminal domain superfamily CLM98_09700 IPR006073 GTP binding domain CLM98_09700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09705 IPR036653 CinA-like, C-terminal CLM98_09705 IPR008136 CinA, C-terminal CLM98_09710 IPR004147 UbiB domain CLM98_09710 IPR011009 Protein kinase-like domain superfamily CLM98_09710 IPR010232 Probable protein kinase UbiB CLM98_09715 IPR036390 Winged helix DNA-binding domain superfamily CLM98_09715 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09715 IPR006200 Transcription regulator LexA CLM98_09715 IPR006199 LexA repressor, DNA-binding domain CLM98_09715 IPR036286 LexA/Signal peptidase-like superfamily CLM98_09715 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_09715 IPR006197 Peptidase S24, LexA-like CLM98_09715 IPR039418 LexA-like CLM98_09720 IPR013765 DNA recombination and repair protein RecA CLM98_09720 IPR003593 AAA+ ATPase domain CLM98_09720 IPR020584 DNA recombination/repair protein RecA, conserved site CLM98_09720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09720 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CLM98_09720 IPR023400 DNA recombination and repair protein RecA, C-terminal CLM98_09720 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CLM98_09730 IPR003783 Regulatory protein RecX CLM98_09730 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09735 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_09735 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CLM98_09735 IPR003156 DHHA1 domain CLM98_09735 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CLM98_09735 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CLM98_09735 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CLM98_09735 IPR002318 Alanine-tRNA ligase, class IIc CLM98_09735 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLM98_09735 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CLM98_09740 IPR003751 Translational regulator CsrA CLM98_09740 IPR036107 Carbon storage regulator superfamily CLM98_09755 IPR013655 PAS fold-3 CLM98_09755 IPR035965 PAS domain superfamily CLM98_09755 IPR001610 PAC motif CLM98_09755 IPR004090 Chemotaxis methyl-accepting receptor CLM98_09755 IPR000014 PAS domain CLM98_09755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_09755 IPR000700 PAS-associated, C-terminal CLM98_09760 IPR012093 Pirin CLM98_09760 IPR003829 Pirin, N-terminal domain CLM98_09760 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CLM98_09760 IPR014710 RmlC-like jelly roll fold CLM98_09760 IPR011051 RmlC-like cupin domain superfamily CLM98_09765 IPR005119 LysR, substrate-binding CLM98_09765 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09765 IPR000847 Transcription regulator HTH, LysR CLM98_09765 IPR036390 Winged helix DNA-binding domain superfamily CLM98_09790 IPR034291 Thiamine phosphate synthase CLM98_09790 IPR022998 Thiamine phosphate synthase/TenI CLM98_09790 IPR036206 Thiamin phosphate synthase superfamily CLM98_09790 IPR029056 Ribokinase-like CLM98_09790 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLM98_09790 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLM98_09790 IPR013785 Aldolase-type TIM barrel CLM98_09805 IPR002716 PIN domain CLM98_09805 IPR029060 PIN-like domain superfamily CLM98_09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09805 IPR003714 PhoH-like protein CLM98_09810 IPR013766 Thioredoxin domain CLM98_09810 IPR036249 Thioredoxin-like superfamily CLM98_09810 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_09825 IPR013785 Aldolase-type TIM barrel CLM98_09825 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLM98_09825 IPR020624 Schiff base-forming aldolase, conserved site CLM98_09825 IPR020625 Schiff base-forming aldolase, active site CLM98_09825 IPR002220 DapA-like CLM98_09835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_09835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_09835 IPR000813 7Fe ferredoxin CLM98_09835 IPR022569 Ferredoxin, C-terminal CLM98_09840 IPR007729 2-keto-3-deoxy-galactonokinase CLM98_09840 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain CLM98_09840 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal CLM98_09845 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_09845 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_09845 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_09850 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_09850 IPR029065 Enolase C-terminal domain-like CLM98_09850 IPR029017 Enolase-like, N-terminal CLM98_09850 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_09850 IPR034593 Mandelate racemase-like CLM98_09850 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_09850 IPR036849 Enolase-like, C-terminal domain superfamily CLM98_09850 IPR023592 D-galactonate dehydratase CLM98_09855 IPR013785 Aldolase-type TIM barrel CLM98_09855 IPR000887 KDPG/KHG aldolase CLM98_09865 IPR036390 Winged helix DNA-binding domain superfamily CLM98_09865 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_09865 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain CLM98_09865 IPR000847 Transcription regulator HTH, LysR CLM98_09865 IPR005119 LysR, substrate-binding CLM98_09880 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLM98_09880 IPR001956 Carbohydrate-binding module 3 CLM98_09880 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CLM98_09880 IPR013783 Immunoglobulin-like fold CLM98_09880 IPR014756 Immunoglobulin E-set CLM98_09880 IPR005102 Carbohydrate binding X2 domain CLM98_09880 IPR036966 Carbohydrate-binding module 3 superfamily CLM98_09895 IPR000322 Glycoside hydrolase family 31 CLM98_09895 IPR011013 Galactose mutarotase-like domain superfamily CLM98_09895 IPR033403 Domain of unknown function DUF5110 CLM98_09895 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 CLM98_09895 IPR013780 Glycosyl hydrolase, all-beta CLM98_09895 IPR017853 Glycoside hydrolase superfamily CLM98_09895 IPR037524 PA14/GLEYA domain CLM98_09905 IPR018483 Carbohydrate kinase, FGGY, conserved site CLM98_09905 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_09905 IPR006000 Xylulokinase CLM98_09905 IPR000577 Carbohydrate kinase, FGGY CLM98_09905 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_09910 IPR001998 Xylose isomerase CLM98_09910 IPR013452 Xylose isomerase, bacterial-type CLM98_09910 IPR036237 Xylose isomerase-like superfamily CLM98_09915 IPR003663 Sugar/inositol transporter CLM98_09915 IPR036259 MFS transporter superfamily CLM98_09915 IPR005828 Major facilitator, sugar transporter-like CLM98_09915 IPR020846 Major facilitator superfamily domain CLM98_09915 IPR005829 Sugar transporter, conserved site CLM98_09935 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_09935 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CLM98_09940 IPR003801 GTP cyclohydrolase FolE2/MptA CLM98_09940 IPR022838 GTP cyclohydrolase FolE2 CLM98_09950 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CLM98_09950 IPR010206 Poly(A) polymerase I CLM98_09950 IPR002646 Poly A polymerase, head domain CLM98_09950 IPR025866 Polymerase A arginine-rich C-terminal domain CLM98_09955 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLM98_09955 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CLM98_09960 IPR040442 Pyruvate kinase-like domain superfamily CLM98_09960 IPR003700 Ketopantoate hydroxymethyltransferase CLM98_09960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_09965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_09965 IPR003721 Pantoate-beta-alanine ligase CLM98_09965 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CLM98_09970 IPR003190 Aspartate decarboxylase CLM98_09970 IPR009010 Aspartate decarboxylase-like domain superfamily CLM98_09975 IPR001672 Phosphoglucose isomerase (PGI) CLM98_09975 IPR023096 Phosphoglucose isomerase, C-terminal CLM98_09975 IPR018189 Phosphoglucose isomerase, conserved site CLM98_09975 IPR035476 Phosphoglucose isomerase, SIS domain 1 CLM98_09975 IPR035482 Phosphoglucose isomerase, SIS domain 2 CLM98_10000 IPR026891 Fibronectin type III-like domain CLM98_10000 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CLM98_10000 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_10000 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_10000 IPR017853 Glycoside hydrolase superfamily CLM98_10000 IPR013783 Immunoglobulin-like fold CLM98_10000 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_10010 IPR038377 Sodium/glucose symporter superfamily CLM98_10010 IPR001734 Sodium/solute symporter CLM98_10010 IPR018212 Sodium/solute symporter, conserved site CLM98_10015 IPR001633 EAL domain CLM98_10015 IPR035919 EAL domain superfamily CLM98_10015 IPR003018 GAF domain CLM98_10015 IPR029016 GAF-like domain superfamily CLM98_10015 IPR000160 GGDEF domain CLM98_10015 IPR029787 Nucleotide cyclase CLM98_10015 IPR016132 Phytochrome chromophore attachment domain CLM98_10015 IPR013515 Phytochrome, central region CLM98_10015 IPR001294 Phytochrome CLM98_10025 IPR017853 Glycoside hydrolase superfamily CLM98_10025 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_10025 IPR001547 Glycoside hydrolase, family 5 CLM98_10025 IPR009031 Carbohydrate binding module family 10 CLM98_10025 IPR036601 CBM10 superfamily CLM98_10025 IPR002883 CBM10/dockerin domain CLM98_10030 IPR001789 Signal transduction response regulator, receiver domain CLM98_10030 IPR011006 CheY-like superfamily CLM98_10045 IPR011005 Dihydropteroate synthase-like CLM98_10045 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CLM98_10045 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CLM98_10050 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_10050 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLM98_10060 IPR020846 Major facilitator superfamily domain CLM98_10060 IPR011701 Major facilitator superfamily CLM98_10060 IPR036259 MFS transporter superfamily CLM98_10060 IPR005829 Sugar transporter, conserved site CLM98_10065 IPR015942 Asp/Glu/hydantoin racemase CLM98_10065 IPR001920 Asp/Glu racemase CLM98_10065 IPR018187 Asp/Glu racemase, active site 1 CLM98_10065 IPR033134 Asp/Glu racemase, active site 2 CLM98_10065 IPR004380 Aspartate racemase CLM98_10075 IPR000620 EamA domain CLM98_10080 IPR006094 FAD linked oxidase, N-terminal CLM98_10080 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CLM98_10080 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CLM98_10080 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CLM98_10080 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_10080 IPR016167 FAD-binding, type PCMH, subdomain 1 CLM98_10080 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_10080 IPR016166 FAD-binding domain, PCMH-type CLM98_10085 IPR001295 Dihydroorotate dehydrogenase, conserved site CLM98_10085 IPR013785 Aldolase-type TIM barrel CLM98_10085 IPR005720 Dihydroorotate dehydrogenase domain CLM98_10085 IPR005719 Dihydroorotate dehydrogenase, class 2 CLM98_10085 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CLM98_10105 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_10105 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_10105 IPR015590 Aldehyde dehydrogenase domain CLM98_10105 IPR010061 Methylmalonate-semialdehyde dehydrogenase CLM98_10105 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_10105 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria CLM98_10105 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_10120 IPR001173 Glycosyltransferase 2-like CLM98_10120 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_10120 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CLM98_10125 IPR002509 NodB homology domain CLM98_10125 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CLM98_10125 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_10125 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CLM98_10135 IPR027282 Two partner secretion pathway transporter CLM98_10135 IPR035251 ShlB, POTRA domain CLM98_10135 IPR034746 POTRA domain CLM98_10135 IPR005565 Haemolysin activator HlyB, C-terminal CLM98_10135 IPR013686 Polypeptide-transport-associated, ShlB-type CLM98_10140 IPR006914 VENN motif-containing domain CLM98_10140 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CLM98_10140 IPR012334 Pectin lyase fold CLM98_10140 IPR025157 Hemagglutinin repeat CLM98_10140 IPR008619 Filamentous haemagglutinin repeat CLM98_10150 IPR006914 VENN motif-containing domain CLM98_10150 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CLM98_10150 IPR008619 Filamentous haemagglutinin repeat CLM98_10150 IPR012334 Pectin lyase fold CLM98_10150 IPR025157 Hemagglutinin repeat CLM98_10160 IPR040559 tRNA nuclease CdiA, C-terminal CLM98_10160 IPR024973 ESPR domain CLM98_10160 IPR008619 Filamentous haemagglutinin repeat CLM98_10160 IPR008638 Filamentous haemagglutinin, N-terminal CLM98_10160 IPR025157 Hemagglutinin repeat CLM98_10160 IPR012334 Pectin lyase fold CLM98_10160 IPR011050 Pectin lyase fold/virulence factor CLM98_10160 IPR033806 CDI toxin, Bp1026b-like CLM98_10170 IPR036291 NAD(P)-binding domain superfamily CLM98_10170 IPR001342 Homoserine dehydrogenase, catalytic CLM98_10170 IPR027795 CASTOR, ACT domain CLM98_10170 IPR019811 Homoserine dehydrogenase, conserved site CLM98_10170 IPR036393 Acetylglutamate kinase-like superfamily CLM98_10170 IPR002912 ACT domain CLM98_10170 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CLM98_10170 IPR018042 Aspartate kinase, conserved site CLM98_10170 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLM98_10170 IPR001341 Aspartate kinase CLM98_10170 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CLM98_10170 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_10175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_10175 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_10175 IPR000870 Homoserine kinase CLM98_10175 IPR006204 GHMP kinase N-terminal domain CLM98_10175 IPR036554 GHMP kinase, C-terminal domain superfamily CLM98_10175 IPR013750 GHMP kinase, C-terminal domain CLM98_10185 IPR004450 Threonine synthase-like CLM98_10185 IPR029144 Threonine synthase, N-terminal CLM98_10185 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLM98_10185 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_10185 IPR037158 Threonine synthase, N-terminal domain superfamily CLM98_10185 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_10195 IPR000595 Cyclic nucleotide-binding domain CLM98_10195 IPR018490 Cyclic nucleotide-binding-like CLM98_10195 IPR018335 Transcription regulator HTH, Crp-type, conserved site CLM98_10195 IPR036390 Winged helix DNA-binding domain superfamily CLM98_10195 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_10195 IPR014710 RmlC-like jelly roll fold CLM98_10195 IPR012318 Crp-type HTH domain CLM98_10200 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_10200 IPR036621 Anticodon-binding domain superfamily CLM98_10200 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CLM98_10200 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLM98_10200 IPR015807 Histidine-tRNA ligase CLM98_10200 IPR004154 Anticodon-binding CLM98_10200 IPR033656 Histidyl-anticodon-binding CLM98_10210 IPR013820 ATP phosphoribosyltransferase, catalytic domain CLM98_10210 IPR018198 ATP phosphoribosyltransferase, conserved site CLM98_10210 IPR001348 ATP phosphoribosyltransferase HisG CLM98_10210 IPR020621 ATP phosphoribosyltransferase HisG, long form CLM98_10210 IPR013115 Histidine biosynthesis HisG, C-terminal CLM98_10210 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_10215 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_10215 IPR022695 Histidinol dehydrogenase, monofunctional CLM98_10215 IPR012131 Histidinol dehydrogenase CLM98_10215 IPR001692 Histidinol dehydrogenase, conserved site CLM98_10220 IPR004839 Aminotransferase, class I/classII CLM98_10220 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_10220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_10220 IPR005861 Histidinol-phosphate aminotransferase family CLM98_10225 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CLM98_10225 IPR000807 Imidazoleglycerol-phosphate dehydratase CLM98_10225 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CLM98_10225 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CLM98_10225 IPR036412 HAD-like superfamily CLM98_10225 IPR005954 Histidinol-phosphatase CLM98_10225 IPR020566 Histidine biosynthesis bifunctional protein HisB CLM98_10225 IPR006543 Histidinol-phosphate phosphatase CLM98_10225 IPR023214 HAD superfamily CLM98_10225 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_10230 IPR010139 Imidazole glycerol phosphate synthase, subunit H CLM98_10230 IPR029062 Class I glutamine amidotransferase-like CLM98_10230 IPR017926 Glutamine amidotransferase CLM98_10235 IPR011060 Ribulose-phosphate binding barrel CLM98_10235 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CLM98_10235 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CLM98_10235 IPR006062 Histidine biosynthesis CLM98_10235 IPR013785 Aldolase-type TIM barrel CLM98_10240 IPR011060 Ribulose-phosphate binding barrel CLM98_10240 IPR004651 Histidine biosynthesis, HisF CLM98_10240 IPR006062 Histidine biosynthesis CLM98_10240 IPR013785 Aldolase-type TIM barrel CLM98_10245 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CLM98_10245 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CLM98_10245 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CLM98_10245 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CLM98_10245 IPR023019 Histidine biosynthesis bifunctional protein HisIE CLM98_10260 IPR036412 HAD-like superfamily CLM98_10260 IPR023943 Enolase-phosphatase E1 CLM98_10260 IPR006439 HAD hydrolase, subfamily IA CLM98_10260 IPR023214 HAD superfamily CLM98_10265 IPR023956 Acireductone dioxygenase ARD, bacteria CLM98_10265 IPR014710 RmlC-like jelly roll fold CLM98_10265 IPR011051 RmlC-like cupin domain superfamily CLM98_10265 IPR004313 Acireductone dioxygenase ARD family CLM98_10270 IPR017714 Methylthioribulose-1-phosphate dehydratase CLM98_10270 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLM98_10270 IPR001303 Class II aldolase/adducin N-terminal CLM98_10275 IPR002293 Amino acid/polyamine transporter I CLM98_10275 IPR004758 Amino acid transporter CLM98_10280 IPR002293 Amino acid/polyamine transporter I CLM98_10280 IPR004758 Amino acid transporter CLM98_10290 IPR002912 ACT domain CLM98_10290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_10290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLM98_10290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_10290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_10290 IPR036291 NAD(P)-binding domain superfamily CLM98_10295 IPR004490 Glycolate oxidase subunit GlcD CLM98_10295 IPR016164 FAD-linked oxidase-like, C-terminal CLM98_10295 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLM98_10295 IPR004113 FAD-linked oxidase, C-terminal CLM98_10295 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_10295 IPR016166 FAD-binding domain, PCMH-type CLM98_10295 IPR006094 FAD linked oxidase, N-terminal CLM98_10315 IPR008991 Translation protein SH3-like domain superfamily CLM98_10315 IPR013852 Translation elongation factor P/YeiP, conserved site CLM98_10315 IPR011897 Translation elongation factor P-like, YeiP CLM98_10315 IPR013185 Translation elongation factor, KOW-like CLM98_10315 IPR020599 Translation elongation factor P/YeiP CLM98_10315 IPR014722 Ribosomal protein L2, domain 2 CLM98_10315 IPR012340 Nucleic acid-binding, OB-fold CLM98_10315 IPR015365 Elongation factor P, C-terminal CLM98_10315 IPR001059 Translation elongation factor P/YeiP, central CLM98_10320 IPR036291 NAD(P)-binding domain superfamily CLM98_10320 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_10320 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_10325 IPR000891 Pyruvate carboxyltransferase CLM98_10325 IPR013785 Aldolase-type TIM barrel CLM98_10325 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site CLM98_10335 IPR014748 Enoyl-CoA hydratase, C-terminal CLM98_10335 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_10335 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_10335 IPR029045 ClpP/crotonase-like domain superfamily CLM98_10345 IPR003373 Ferrous iron transport protein B CLM98_10345 IPR011640 Ferrous iron transport protein B, C-terminal CLM98_10345 IPR006073 GTP binding domain CLM98_10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10345 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CLM98_10345 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CLM98_10360 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10360 IPR004839 Aminotransferase, class I/classII CLM98_10360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_10360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_10365 IPR005163 3-alpha domain CLM98_10365 IPR005302 Molybdenum cofactor sulfurase, C-terminal CLM98_10365 IPR011037 Pyruvate kinase-like, insert domain superfamily CLM98_10370 IPR000846 Dihydrodipicolinate reductase, N-terminal CLM98_10370 IPR022664 Dihydrodipicolinate reductase, conserved site CLM98_10370 IPR022663 Dihydrodipicolinate reductase, C-terminal CLM98_10370 IPR036291 NAD(P)-binding domain superfamily CLM98_10370 IPR023940 Dihydrodipicolinate reductase CLM98_10375 IPR017926 Glutamine amidotransferase CLM98_10375 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CLM98_10375 IPR029062 Class I glutamine amidotransferase-like CLM98_10375 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CLM98_10375 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CLM98_10375 IPR006274 Carbamoyl-phosphate synthase, small subunit CLM98_10385 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CLM98_10385 IPR011607 Methylglyoxal synthase-like domain CLM98_10385 IPR036914 Methylglyoxal synthase-like domain superfamily CLM98_10385 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_10385 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CLM98_10385 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CLM98_10385 IPR006275 Carbamoyl-phosphate synthase, large subunit CLM98_10385 IPR011761 ATP-grasp fold CLM98_10385 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CLM98_10385 IPR016185 Pre-ATP-grasp domain superfamily CLM98_10390 IPR006359 Transcription elongation factor GreA CLM98_10390 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLM98_10390 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CLM98_10390 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_10390 IPR023459 Transcription elongation factor GreA/GreB family CLM98_10390 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLM98_10390 IPR028624 Transcription elongation factor GreA/GreB CLM98_10390 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CLM98_10400 IPR001667 DDH domain CLM98_10400 IPR038763 DHH phosphoesterase superfamily CLM98_10400 IPR003156 DHHA1 domain CLM98_10400 IPR004610 Bacterial RecJ exonuclease CLM98_10400 IPR041122 RecJ, OB domain CLM98_10440 IPR001789 Signal transduction response regulator, receiver domain CLM98_10440 IPR007492 LytTR DNA-binding domain CLM98_10440 IPR011006 CheY-like superfamily CLM98_10445 IPR000352 Peptide chain release factor class I CLM98_10445 IPR004374 Peptide chain release factor 2 CLM98_10445 IPR005139 Peptide chain release factor CLM98_10450 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLM98_10450 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_10450 IPR002313 Lysine-tRNA ligase, class II CLM98_10450 IPR012340 Nucleic acid-binding, OB-fold CLM98_10450 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_10450 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_10455 IPR011006 CheY-like superfamily CLM98_10455 IPR003607 HD/PDEase domain CLM98_10455 IPR037522 HD-GYP domain CLM98_10455 IPR001789 Signal transduction response regulator, receiver domain CLM98_10460 IPR001789 Signal transduction response regulator, receiver domain CLM98_10460 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10460 IPR036641 HPT domain superfamily CLM98_10460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_10460 IPR005467 Histidine kinase domain CLM98_10460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_10460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_10460 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_10460 IPR011006 CheY-like superfamily CLM98_10465 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_10465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_10465 IPR029045 ClpP/crotonase-like domain superfamily CLM98_10470 IPR042099 AMP-dependent synthetase-like superfamily CLM98_10470 IPR000873 AMP-dependent synthetase/ligase CLM98_10470 IPR020845 AMP-binding, conserved site CLM98_10470 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_10480 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CLM98_10480 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLM98_10480 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLM98_10480 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_10480 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_10480 IPR036008 Aconitase, iron-sulfur domain CLM98_10480 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_10495 IPR015932 Aconitase, domain 2 CLM98_10495 IPR015929 Aconitase B, swivel CLM98_10495 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_10495 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_10495 IPR004406 Aconitase B CLM98_10495 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLM98_10495 IPR036008 Aconitase, iron-sulfur domain CLM98_10495 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_10495 IPR036288 Aconitase B, HEAT-like domain superfamily CLM98_10495 IPR015933 Aconitase B, HEAT-like domain CLM98_10500 IPR019913 Pyrimidine utilisation protein RutD CLM98_10500 IPR000073 Alpha/beta hydrolase fold-1 CLM98_10500 IPR029058 Alpha/Beta hydrolase fold CLM98_10505 IPR035919 EAL domain superfamily CLM98_10505 IPR001633 EAL domain CLM98_10505 IPR029787 Nucleotide cyclase CLM98_10505 IPR000160 GGDEF domain CLM98_10505 IPR005330 MHYT domain CLM98_10510 IPR001789 Signal transduction response regulator, receiver domain CLM98_10510 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_10510 IPR011006 CheY-like superfamily CLM98_10510 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CLM98_10510 IPR035909 Methylesterase CheB, C-terminal CLM98_10515 IPR038592 CheD-like superfamily CLM98_10515 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLM98_10515 IPR005659 Chemoreceptor glutamine deamidase CheD CLM98_10520 IPR026024 Chemotaxis protein methyltransferase CheR CLM98_10520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_10520 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLM98_10520 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLM98_10520 IPR000780 MCP methyltransferase, CheR-type CLM98_10520 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_10525 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10525 IPR003660 HAMP domain CLM98_10525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10525 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10525 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10525 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10535 IPR036061 CheW-like domain superfamily CLM98_10535 IPR039315 Chemotaxis protein CheW CLM98_10535 IPR002545 CheW-like domain CLM98_10540 IPR023787 Type III secretion system flagellar brake protein YcgR CLM98_10540 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLM98_10540 IPR009875 PilZ domain CLM98_10540 IPR012349 FMN-binding split barrel CLM98_10550 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10550 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10550 IPR003660 HAMP domain CLM98_10550 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10550 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10550 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10555 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10555 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10555 IPR003660 HAMP domain CLM98_10555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10555 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10555 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10560 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10560 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10560 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10560 IPR003660 HAMP domain CLM98_10560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10560 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10565 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10565 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10565 IPR003660 HAMP domain CLM98_10565 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10565 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10570 IPR003660 HAMP domain CLM98_10570 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10570 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10570 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10570 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10580 IPR003660 HAMP domain CLM98_10580 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10580 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10580 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10580 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10585 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10585 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10585 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10585 IPR003660 HAMP domain CLM98_10585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10585 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10590 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10590 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10590 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10590 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10590 IPR003660 HAMP domain CLM98_10595 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10595 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10595 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10595 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10595 IPR003660 HAMP domain CLM98_10610 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_10610 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10610 IPR003660 HAMP domain CLM98_10610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10610 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_10610 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_10615 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10615 IPR003660 HAMP domain CLM98_10615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10615 IPR033480 Single Cache domain 2 CLM98_10630 IPR005467 Histidine kinase domain CLM98_10630 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_10630 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CLM98_10630 IPR036061 CheW-like domain superfamily CLM98_10630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_10630 IPR002545 CheW-like domain CLM98_10630 IPR035891 CheY-binding domain of CheA CLM98_10630 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_10630 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10630 IPR036641 HPT domain superfamily CLM98_10630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_10630 IPR015162 CheY binding CLM98_10635 IPR001789 Signal transduction response regulator, receiver domain CLM98_10635 IPR011006 CheY-like superfamily CLM98_10645 IPR002545 CheW-like domain CLM98_10645 IPR039315 Chemotaxis protein CheW CLM98_10645 IPR036061 CheW-like domain superfamily CLM98_10650 IPR025669 AAA domain CLM98_10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10655 IPR025713 Motility protein B, N-terminal domain CLM98_10655 IPR036737 OmpA-like domain superfamily CLM98_10655 IPR006665 OmpA-like domain CLM98_10660 IPR002898 MotA/TolQ/ExbB proton channel CLM98_10660 IPR000540 Flagellar motor protein MotA, conserved site CLM98_10680 IPR008271 Serine/threonine-protein kinase, active site CLM98_10680 IPR017441 Protein kinase, ATP binding site CLM98_10680 IPR000719 Protein kinase domain CLM98_10680 IPR005543 PASTA domain CLM98_10680 IPR011009 Protein kinase-like domain superfamily CLM98_10740 IPR018752 Uncharacterised protein family UPF0753 CLM98_10775 IPR013785 Aldolase-type TIM barrel CLM98_10775 IPR023885 4Fe4S-binding SPASM domain CLM98_10775 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CLM98_10775 IPR007197 Radical SAM CLM98_10795 IPR035891 CheY-binding domain of CheA CLM98_10795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10795 IPR036641 HPT domain superfamily CLM98_10795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_10795 IPR005467 Histidine kinase domain CLM98_10795 IPR002545 CheW-like domain CLM98_10795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_10795 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CLM98_10795 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10795 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_10795 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_10795 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CLM98_10795 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CLM98_10795 IPR036061 CheW-like domain superfamily CLM98_10800 IPR007439 Chemotaxis phosphatase, CheZ CLM98_10805 IPR011006 CheY-like superfamily CLM98_10805 IPR001789 Signal transduction response regulator, receiver domain CLM98_10810 IPR028617 RNA polymerase sigma factor FliA CLM98_10810 IPR007627 RNA polymerase sigma-70 region 2 CLM98_10810 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_10810 IPR013325 RNA polymerase sigma factor, region 2 CLM98_10810 IPR012845 RNA polymerase sigma factor, FliA/WhiG CLM98_10810 IPR007630 RNA polymerase sigma-70 region 4 CLM98_10810 IPR007624 RNA polymerase sigma-70 region 3 CLM98_10810 IPR000943 RNA polymerase sigma-70 CLM98_10810 IPR014284 RNA polymerase sigma-70 like domain CLM98_10815 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLM98_10815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10815 IPR025501 ATP binding protein MinD CLM98_10820 IPR020006 Flagellar biosynthesis protein FlhF CLM98_10820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10820 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_10820 IPR003593 AAA+ ATPase domain CLM98_10825 IPR042196 FHIPEP, domain 4 CLM98_10825 IPR001712 Type III secretion system FHIPEP CLM98_10825 IPR042194 FHIPEP, domain 1 CLM98_10825 IPR006301 Flagellar biosynthesis protein FlhA CLM98_10825 IPR042193 FHIPEP, domain 3 CLM98_10825 IPR025505 FHIPEP conserved site CLM98_10830 IPR006136 Flagellar biosynthetic protein FlhB CLM98_10830 IPR006135 Type III secretion system substrate exporter CLM98_10830 IPR029025 Type III secretion system substrate exporter, C-terminal CLM98_10835 IPR029787 Nucleotide cyclase CLM98_10835 IPR001633 EAL domain CLM98_10835 IPR035919 EAL domain superfamily CLM98_10835 IPR000160 GGDEF domain CLM98_10835 IPR005330 MHYT domain CLM98_10840 IPR035965 PAS domain superfamily CLM98_10840 IPR000014 PAS domain CLM98_10840 IPR005330 MHYT domain CLM98_10840 IPR029787 Nucleotide cyclase CLM98_10840 IPR035919 EAL domain superfamily CLM98_10840 IPR000160 GGDEF domain CLM98_10840 IPR001633 EAL domain CLM98_10850 IPR001633 EAL domain CLM98_10850 IPR035919 EAL domain superfamily CLM98_10850 IPR000014 PAS domain CLM98_10850 IPR029787 Nucleotide cyclase CLM98_10850 IPR005330 MHYT domain CLM98_10850 IPR035965 PAS domain superfamily CLM98_10850 IPR000160 GGDEF domain CLM98_10855 IPR002010 Type III secretion system inner membrane R protein CLM98_10855 IPR006303 Flagellar biosynthesis protein FliR CLM98_10860 IPR006305 Flagellar biosynthesis protein FliQ CLM98_10860 IPR002191 Bacterial export protein family 3 CLM98_10865 IPR005838 Type III secretion system inner membrane P protein CLM98_10865 IPR005837 Flagellar transport protein FliP CLM98_10870 IPR022781 Flagellar biosynthesis protein, FliO CLM98_10875 IPR012826 Flagellar motor switch FliN CLM98_10875 IPR036429 SpoA-like superfamily CLM98_10875 IPR001543 Surface presentation of antigen (SpoA) CLM98_10875 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CLM98_10880 IPR036429 SpoA-like superfamily CLM98_10880 IPR028976 CheC-like superfamily CLM98_10880 IPR001689 Flagellar motor switch protein FliM CLM98_10880 IPR001543 Surface presentation of antigen (SpoA) CLM98_10900 IPR020005 Flagellar export ATPase FliI, clade 1 CLM98_10900 IPR032463 ATPase, type III secretion system, FliI CLM98_10900 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_10900 IPR040627 T3SS EscN ATPase, C-terminal CLM98_10900 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_10900 IPR003593 AAA+ ATPase domain CLM98_10900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10900 IPR005714 ATPase, type III secretion system, FliI/YscN CLM98_10910 IPR000090 Flagellar motor switch protein FliG CLM98_10910 IPR023087 Flagellar motor switch protein FliG, C-terminal CLM98_10910 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLM98_10910 IPR032779 Flagellar motor switch protein FliG, middle domain CLM98_10910 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLM98_10915 IPR000067 Flagellar M-ring protein FliF CLM98_10915 IPR013556 Flagellar M-ring C-terminal CLM98_10915 IPR006182 Secretory protein YscJ/FliF CLM98_10920 IPR001624 Flagellar hook-basal body complex protein FliE CLM98_10925 IPR001296 Glycosyl transferase, family 1 CLM98_10925 IPR001173 Glycosyltransferase 2-like CLM98_10925 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_10950 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_10950 IPR036291 NAD(P)-binding domain superfamily CLM98_10950 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_10955 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_10955 IPR036291 NAD(P)-binding domain superfamily CLM98_10955 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_10960 IPR016039 Thiolase-like CLM98_10960 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_10960 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLM98_10960 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLM98_10970 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLM98_10970 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_10975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_10975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_10975 IPR010114 DNA-binding transcriptional regulator NtrC CLM98_10975 IPR003593 AAA+ ATPase domain CLM98_10975 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_10975 IPR001789 Signal transduction response regulator, receiver domain CLM98_10975 IPR025944 Sigma-54 interaction domain, conserved site CLM98_10975 IPR002197 DNA binding HTH domain, Fis-type CLM98_10975 IPR011006 CheY-like superfamily CLM98_10975 IPR009057 Homeobox-like domain superfamily CLM98_10975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10980 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CLM98_10980 IPR035909 Methylesterase CheB, C-terminal CLM98_10980 IPR011006 CheY-like superfamily CLM98_10980 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_10980 IPR001789 Signal transduction response regulator, receiver domain CLM98_10985 IPR007046 RNA polymerase sigma factor 54, core-binding domain CLM98_10985 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLM98_10985 IPR000394 RNA polymerase sigma factor 54 CLM98_10985 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CLM98_10990 IPR011006 CheY-like superfamily CLM98_10990 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_10990 IPR001789 Signal transduction response regulator, receiver domain CLM98_10990 IPR000792 Transcription regulator LuxR, C-terminal CLM98_11005 IPR003713 Flagellar protein FliS CLM98_11005 IPR036584 Flagellar protein FliS superfamily CLM98_11010 IPR003481 Flagellar hook-associated protein 2, N-terminal CLM98_11010 IPR010810 Flagellin hook, IN motif CLM98_11010 IPR010809 Flagellar hook-associated protein 2, C-terminal CLM98_11010 IPR040026 Flagellar hook-associated protein 2 CLM98_11015 IPR001029 Flagellin, D0/D1 domain CLM98_11015 IPR001492 Flagellin CLM98_11015 IPR042187 Flagellin, C-terminal domain, subdomain 2 CLM98_11020 IPR013384 Flagellar hook-associated protein 3 CLM98_11020 IPR001029 Flagellin, D0/D1 domain CLM98_11025 IPR010810 Flagellin hook, IN motif CLM98_11025 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11025 IPR002371 Flagellar hook-associated protein 1 CLM98_11030 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLM98_11030 IPR013377 Peptidoglycan hydrolase FlgJ CLM98_11030 IPR019301 Flagellar protein FlgJ, N-terminal CLM98_11035 IPR001782 Flagellar P-ring protein CLM98_11040 IPR000527 Flagellar L-ring protein CLM98_11045 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLM98_11045 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11045 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLM98_11045 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11045 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11045 IPR012834 Flagellar basal-body rod FlgG CLM98_11050 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11050 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLM98_11050 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11050 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11050 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLM98_11055 IPR011491 Flagellar hook protein FlgE CLM98_11055 IPR037058 Flagellar hook protein FlgE superfamily CLM98_11055 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11055 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11055 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLM98_11055 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLM98_11055 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11060 IPR005648 Flagellar hook capping protein CLM98_11065 IPR006299 Flagellar basal-body rod protein FlgC CLM98_11065 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11065 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11065 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11070 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11070 IPR006300 Flagellar basal-body rod protein FlgB CLM98_11075 IPR001789 Signal transduction response regulator, receiver domain CLM98_11075 IPR011006 CheY-like superfamily CLM98_11075 IPR024181 Chemotaxis response regulator CheV CLM98_11075 IPR036061 CheW-like domain superfamily CLM98_11075 IPR002545 CheW-like domain CLM98_11095 IPR005467 Histidine kinase domain CLM98_11095 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_11095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_11095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_11095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_11095 IPR013767 PAS fold CLM98_11095 IPR035965 PAS domain superfamily CLM98_11095 IPR000014 PAS domain CLM98_11100 IPR000160 GGDEF domain CLM98_11100 IPR005330 MHYT domain CLM98_11100 IPR029787 Nucleotide cyclase CLM98_11100 IPR035919 EAL domain superfamily CLM98_11100 IPR001633 EAL domain CLM98_11105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11105 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_11105 IPR005467 Histidine kinase domain CLM98_11105 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_11105 IPR017203 Signal transduction histidine kinase, NreB CLM98_11105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_11110 IPR000160 GGDEF domain CLM98_11110 IPR035919 EAL domain superfamily CLM98_11110 IPR001633 EAL domain CLM98_11110 IPR005330 MHYT domain CLM98_11110 IPR029787 Nucleotide cyclase CLM98_11120 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLM98_11120 IPR003660 HAMP domain CLM98_11120 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_11120 IPR004090 Chemotaxis methyl-accepting receptor CLM98_11120 IPR000727 Target SNARE coiled-coil homology domain CLM98_11125 IPR007451 High frequency lysogenization protein HflD CLM98_11125 IPR035932 HflD-like superfamily CLM98_11130 IPR004506 tRNA-specific 2-thiouridylase CLM98_11130 IPR023382 Adenine nucleotide alpha hydrolase-like domains CLM98_11130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_11135 IPR033713 Phosphatase NudJ CLM98_11135 IPR000086 NUDIX hydrolase domain CLM98_11135 IPR020084 NUDIX hydrolase, conserved site CLM98_11135 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_11135 IPR020476 NUDIX hydrolase CLM98_11140 IPR003769 Adaptor protein ClpS, core CLM98_11140 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CLM98_11140 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLM98_11145 IPR018368 ClpA/B, conserved site 1 CLM98_11145 IPR028299 ClpA/B, conserved site 2 CLM98_11145 IPR036628 Clp, N-terminal domain superfamily CLM98_11145 IPR019489 Clp ATPase, C-terminal CLM98_11145 IPR003593 AAA+ ATPase domain CLM98_11145 IPR001270 ClpA/B family CLM98_11145 IPR041546 ClpA/ClpB, AAA lid domain CLM98_11145 IPR004176 Clp, N-terminal CLM98_11145 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CLM98_11145 IPR003959 ATPase, AAA-type, core CLM98_11145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11150 IPR012340 Nucleic acid-binding, OB-fold CLM98_11150 IPR022967 RNA-binding domain, S1 CLM98_11150 IPR004368 Translation initiation factor IF-1 CLM98_11150 IPR006196 RNA-binding domain, S1, IF1 type CLM98_11155 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CLM98_11155 IPR016181 Acyl-CoA N-acyltransferase CLM98_11155 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CLM98_11165 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_11165 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLM98_11165 IPR005982 Thioredoxin reductase CLM98_11165 IPR023753 FAD/NAD(P)-binding domain CLM98_11170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11170 IPR003593 AAA+ ATPase domain CLM98_11170 IPR025199 DNA translocase FtsK, 4TM region CLM98_11170 IPR041027 FtsK alpha domain CLM98_11170 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_11170 IPR018541 FtsK gamma domain CLM98_11170 IPR002543 FtsK domain CLM98_11170 IPR036390 Winged helix DNA-binding domain superfamily CLM98_11180 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLM98_11180 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CLM98_11180 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CLM98_11190 IPR021886 MgsA AAA+ ATPase C-terminal CLM98_11190 IPR003593 AAA+ ATPase domain CLM98_11190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11190 IPR032423 AAA C-terminal domain CLM98_11190 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLM98_11190 IPR003959 ATPase, AAA-type, core CLM98_11195 IPR003691 Putative fluoride ion transporter CrcB CLM98_11205 IPR016039 Thiolase-like CLM98_11205 IPR020613 Thiolase, conserved site CLM98_11205 IPR020617 Thiolase, C-terminal CLM98_11205 IPR020610 Thiolase, active site CLM98_11205 IPR002155 Thiolase CLM98_11205 IPR020616 Thiolase, N-terminal CLM98_11205 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_11210 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLM98_11210 IPR036291 NAD(P)-binding domain superfamily CLM98_11210 IPR001753 Enoyl-CoA hydratase/isomerase CLM98_11210 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_11210 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLM98_11210 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_11210 IPR029045 ClpP/crotonase-like domain superfamily CLM98_11220 IPR034907 Nucleoside diphosphate kinase-like domain CLM98_11220 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CLM98_11220 IPR001564 Nucleoside diphosphate kinase CLM98_11220 IPR023005 Nucleoside diphosphate kinase, active site CLM98_11225 IPR007197 Radical SAM CLM98_11225 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CLM98_11225 IPR027492 Dual-specificity RNA methyltransferase RlmN CLM98_11225 IPR013785 Aldolase-type TIM barrel CLM98_11225 IPR040072 Methyltransferase (Class A) CLM98_11235 IPR025194 Domain of unknown function DUF4115 CLM98_11235 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_11235 IPR023690 Cytoskeleton protein RodZ CLM98_11235 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_11245 IPR017687 Outer membrane protein assembly factor BamB CLM98_11245 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_11245 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_11245 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLM98_11245 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLM98_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11250 IPR005225 Small GTP-binding protein domain CLM98_11250 IPR015946 K homology domain-like, alpha/beta CLM98_11250 IPR031166 EngA-type guanine nucleotide-binding (G) domain CLM98_11250 IPR016484 GTP-binding protein EngA CLM98_11250 IPR032859 GTPase Der, C-terminal KH-domain-like CLM98_11250 IPR003593 AAA+ ATPase domain CLM98_11250 IPR006073 GTP binding domain CLM98_11255 IPR036688 MoeA, C-terminal, domain IV superfamily CLM98_11255 IPR005111 MoeA, C-terminal, domain IV CLM98_11255 IPR005110 MoeA, N-terminal and linker domain CLM98_11255 IPR036425 MoaB/Mog-like domain superfamily CLM98_11255 IPR036135 MoeA, N-terminal and linker domain superfamily CLM98_11255 IPR001453 MoaB/Mog domain CLM98_11255 IPR038987 Molybdopterin biosynthesis protein MoeA-like CLM98_11255 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLM98_11260 IPR000594 THIF-type NAD/FAD binding fold CLM98_11260 IPR035985 Ubiquitin-activating enzyme CLM98_11290 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_11290 IPR036291 NAD(P)-binding domain superfamily CLM98_11290 IPR011032 GroES-like superfamily CLM98_11290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_11290 IPR027399 Alcohol dehydrogenase GroES-associated CLM98_11290 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_11300 IPR020847 AP endonuclease 1, binding site CLM98_11300 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLM98_11300 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_11300 IPR037493 Exodeoxyribonuclease III-like CLM98_11300 IPR020848 AP endonuclease 1, conserved site CLM98_11300 IPR004808 AP endonuclease 1 CLM98_11310 IPR001453 MoaB/Mog domain CLM98_11310 IPR005110 MoeA, N-terminal and linker domain CLM98_11310 IPR036135 MoeA, N-terminal and linker domain superfamily CLM98_11310 IPR036688 MoeA, C-terminal, domain IV superfamily CLM98_11310 IPR005111 MoeA, C-terminal, domain IV CLM98_11310 IPR038987 Molybdopterin biosynthesis protein MoeA-like CLM98_11310 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLM98_11310 IPR036425 MoaB/Mog-like domain superfamily CLM98_11315 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_11315 IPR025877 MobA-like NTP transferase CLM98_11315 IPR013482 Molybdenum cofactor guanylyltransferase CLM98_11325 IPR000639 Epoxide hydrolase-like CLM98_11325 IPR029058 Alpha/Beta hydrolase fold CLM98_11325 IPR000073 Alpha/beta hydrolase fold-1 CLM98_11330 IPR001046 NRAMP family CLM98_11335 IPR022687 DTXR-type HTH domain CLM98_11335 IPR022689 Iron dependent repressor CLM98_11335 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CLM98_11335 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_11335 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CLM98_11335 IPR036390 Winged helix DNA-binding domain superfamily CLM98_11340 IPR028883 tRNA-specific adenosine deaminase CLM98_11340 IPR016193 Cytidine deaminase-like CLM98_11340 IPR002125 Cytidine and deoxycytidylate deaminase domain CLM98_11340 IPR016192 APOBEC/CMP deaminase, zinc-binding CLM98_11345 IPR036397 Ribonuclease H superfamily CLM98_11345 IPR022894 Oligoribonuclease CLM98_11345 IPR012337 Ribonuclease H-like superfamily CLM98_11345 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_11350 IPR008910 Conserved TM helix CLM98_11350 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLM98_11350 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLM98_11350 IPR006686 Mechanosensitive ion channel MscS, conserved site CLM98_11350 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLM98_11350 IPR006685 Mechanosensitive ion channel MscS CLM98_11350 IPR010920 LSM domain superfamily CLM98_11355 IPR018274 PEP-utilising enzyme, active site CLM98_11355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_11355 IPR036637 Phosphohistidine domain superfamily CLM98_11355 IPR013815 ATP-grasp fold, subdomain 1 CLM98_11355 IPR023151 PEP-utilising enzyme, conserved site CLM98_11355 IPR000121 PEP-utilising enzyme, C-terminal CLM98_11355 IPR008279 PEP-utilising enzyme, mobile domain CLM98_11355 IPR006319 Phosphoenolpyruvate synthase CLM98_11355 IPR040442 Pyruvate kinase-like domain superfamily CLM98_11355 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CLM98_11360 IPR026530 Phosphoenolpyruvate synthase regulatory protein CLM98_11360 IPR005177 Bifunctional kinase-pyrophosphorylase CLM98_11375 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_11375 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_11375 IPR036291 NAD(P)-binding domain superfamily CLM98_11375 IPR011294 3-hydroxybutyrate dehydrogenase CLM98_11380 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_11380 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CLM98_11390 IPR029058 Alpha/Beta hydrolase fold CLM98_11390 IPR000073 Alpha/beta hydrolase fold-1 CLM98_11390 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit CLM98_11405 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_11405 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_11405 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLM98_11405 IPR005805 Rieske iron-sulphur protein, C-terminal CLM98_11405 IPR038010 YhfW, C-terminal Rieske domain CLM98_11405 IPR006076 FAD dependent oxidoreductase CLM98_11415 IPR037027 YqgF/RNase H-like domain superfamily CLM98_11415 IPR006641 YqgF/RNase H-like domain CLM98_11415 IPR022967 RNA-binding domain, S1 CLM98_11415 IPR012340 Nucleic acid-binding, OB-fold CLM98_11415 IPR041692 HHH domain 9 CLM98_11415 IPR012337 Ribonuclease H-like superfamily CLM98_11415 IPR010994 RuvA domain 2-like CLM98_11415 IPR003029 S1 domain CLM98_11415 IPR023319 Tex-like protein, HTH domain superfamily CLM98_11415 IPR023323 Tex-like domain superfamily CLM98_11415 IPR018974 Tex-like protein, N-terminal CLM98_11415 IPR032639 Tex protein, YqgF-like domain CLM98_11420 IPR005467 Histidine kinase domain CLM98_11420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_11420 IPR035965 PAS domain superfamily CLM98_11420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11420 IPR015387 LuxQ, periplasmic CLM98_11420 IPR001789 Signal transduction response regulator, receiver domain CLM98_11420 IPR011006 CheY-like superfamily CLM98_11420 IPR029151 Periplasmic sensor-like domain superfamily CLM98_11420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_11420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_11420 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_11465 IPR009056 Cytochrome c-like domain CLM98_11465 IPR036909 Cytochrome c-like domain superfamily CLM98_11475 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_11475 IPR006143 RND efflux pump, membrane fusion protein CLM98_11480 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11480 IPR001036 Acriflavin resistance protein CLM98_11485 IPR001036 Acriflavin resistance protein CLM98_11485 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11485 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_11495 IPR031337 KDPG/KHG aldolase, active site 1 CLM98_11495 IPR000887 KDPG/KHG aldolase CLM98_11495 IPR031338 KDPG/KHG aldolase, active site 2 CLM98_11495 IPR013785 Aldolase-type TIM barrel CLM98_11500 IPR004786 6-phosphogluconate dehydratase CLM98_11500 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLM98_11500 IPR042096 Dihydroxy-acid dehydratase, C-terminal CLM98_11500 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLM98_11500 IPR037237 IlvD/EDD, N-terminal domain CLM98_11505 IPR005900 6-phosphogluconolactonase, DevB-type CLM98_11505 IPR037171 NagB/RpiA transferase-like CLM98_11505 IPR039104 6-Phosphogluconolactonase CLM98_11505 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CLM98_11510 IPR003836 Glucokinase CLM98_11515 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CLM98_11515 IPR036291 NAD(P)-binding domain superfamily CLM98_11515 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CLM98_11515 IPR001282 Glucose-6-phosphate dehydrogenase CLM98_11515 IPR019796 Glucose-6-phosphate dehydrogenase, active site CLM98_11520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11520 IPR040582 MalK, OB fold domain CLM98_11520 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_11520 IPR017871 ABC transporter, conserved site CLM98_11520 IPR003439 ABC transporter-like CLM98_11520 IPR003593 AAA+ ATPase domain CLM98_11520 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CLM98_11525 IPR023758 tRNA-modifying protein YgfZ CLM98_11525 IPR017703 YgfZ/GcvT conserved site CLM98_11525 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CLM98_11535 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CLM98_11535 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CLM98_11535 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CLM98_11535 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CLM98_11540 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CLM98_11540 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CLM98_11540 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CLM98_11545 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CLM98_11545 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CLM98_11545 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_11545 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CLM98_11545 IPR011281 Succinate dehydrogenase, flavoprotein subunit CLM98_11545 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CLM98_11545 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CLM98_11545 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CLM98_11555 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CLM98_11555 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_11555 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_11555 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_11555 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_11555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_11555 IPR012675 Beta-grasp domain superfamily CLM98_11555 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CLM98_11555 IPR009051 Alpha-helical ferredoxin CLM98_11560 IPR005631 Flavinator of succinate dehydrogenase CLM98_11560 IPR036714 Flavinator of succinate dehydrogenase superfamily CLM98_11570 IPR025857 MacB-like periplasmic core domain CLM98_11570 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CLM98_11570 IPR003838 ABC transporter permease protein domain CLM98_11575 IPR003593 AAA+ ATPase domain CLM98_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11575 IPR011924 Lipoprotein releasing system, ATP-binding protein CLM98_11575 IPR015854 ABC transporter, lipoprotein release, LolD CLM98_11575 IPR003439 ABC transporter-like CLM98_11585 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_11585 IPR001279 Metallo-beta-lactamase CLM98_11585 IPR004797 Competence protein ComEC/Rec2 CLM98_11585 IPR004477 ComEC/Rec2-related protein CLM98_11585 IPR035681 ComA-like, MBL domain CLM98_11590 IPR002898 MotA/TolQ/ExbB proton channel CLM98_11600 IPR011917 ABC transporter, lipid A export, MsbA CLM98_11600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11600 IPR039421 Type I protein exporter CLM98_11600 IPR017871 ABC transporter, conserved site CLM98_11600 IPR003439 ABC transporter-like CLM98_11600 IPR011527 ABC transporter type 1, transmembrane domain CLM98_11600 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_11600 IPR003593 AAA+ ATPase domain CLM98_11605 IPR003758 Tetraacyldisaccharide 4'-kinase CLM98_11605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11610 IPR003329 Acylneuraminate cytidylyltransferase CLM98_11610 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CLM98_11610 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_11615 IPR017867 Protein-tyrosine phosphatase, low molecular weight CLM98_11615 IPR023485 Phosphotyrosine protein phosphatase I CLM98_11615 IPR036196 Phosphotyrosine protein phosphatase I superfamily CLM98_11625 IPR035901 GIY-YIG endonuclease superfamily CLM98_11625 IPR038476 UvrC homology region 2 superfamily CLM98_11625 IPR000305 GIY-YIG endonuclease CLM98_11625 IPR004791 UvrABC system, subunit C CLM98_11625 IPR036876 UVR domain superfamily CLM98_11625 IPR001943 UVR domain CLM98_11625 IPR010994 RuvA domain 2-like CLM98_11625 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLM98_11625 IPR001162 UvrC family homology region CLM98_11630 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CLM98_11630 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CLM98_11630 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_11650 IPR010071 Amino acid adenylation domain CLM98_11650 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_11650 IPR020845 AMP-binding, conserved site CLM98_11650 IPR000873 AMP-dependent synthetase/ligase CLM98_11650 IPR036736 ACP-like superfamily CLM98_11650 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_11650 IPR001242 Condensation domain CLM98_11650 IPR010060 Non-ribosomal peptide synthase CLM98_11650 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_11650 IPR009081 Phosphopantetheine binding ACP domain CLM98_11650 IPR006162 Phosphopantetheine attachment site CLM98_11650 IPR042099 AMP-dependent synthetase-like superfamily CLM98_11655 IPR001242 Condensation domain CLM98_11655 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_11655 IPR020802 Polyketide synthase, thioesterase domain CLM98_11655 IPR009081 Phosphopantetheine binding ACP domain CLM98_11655 IPR000873 AMP-dependent synthetase/ligase CLM98_11655 IPR036736 ACP-like superfamily CLM98_11655 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_11655 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_11655 IPR029058 Alpha/Beta hydrolase fold CLM98_11655 IPR010071 Amino acid adenylation domain CLM98_11655 IPR001031 Thioesterase CLM98_11655 IPR020845 AMP-binding, conserved site CLM98_11655 IPR042099 AMP-dependent synthetase-like superfamily CLM98_11670 IPR002104 Integrase, catalytic domain CLM98_11670 IPR010998 Integrase/recombinase, N-terminal CLM98_11670 IPR013762 Integrase-like, catalytic domain superfamily CLM98_11670 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_11680 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CLM98_11680 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_11680 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_11680 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CLM98_11680 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_11680 IPR036291 NAD(P)-binding domain superfamily CLM98_11680 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_11680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_11690 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLM98_11705 IPR011006 CheY-like superfamily CLM98_11705 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_11705 IPR001789 Signal transduction response regulator, receiver domain CLM98_11705 IPR000792 Transcription regulator LuxR, C-terminal CLM98_11710 IPR003029 S1 domain CLM98_11710 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLM98_11710 IPR021968 Polyribonucleotide phosphorylase C-terminal CLM98_11710 IPR012340 Nucleic acid-binding, OB-fold CLM98_11710 IPR028878 Ribonuclease E CLM98_11710 IPR022967 RNA-binding domain, S1 CLM98_11710 IPR004659 Ribonuclease E/G CLM98_11715 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_11715 IPR006225 Pseudouridine synthase, RluC/RluD CLM98_11715 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_11715 IPR036986 RNA-binding S4 domain superfamily CLM98_11715 IPR002942 RNA-binding S4 domain CLM98_11715 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_11720 IPR021728 Protein of unknown function DUF3300 CLM98_11725 IPR023498 Zinc transporter ZupT CLM98_11725 IPR003689 Zinc/iron permease CLM98_11735 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily CLM98_11735 IPR001533 Pterin 4 alpha carbinolamine dehydratase CLM98_11740 IPR017726 Fe/S biogenesis protein NfuA CLM98_11740 IPR034904 Fe-S cluster assembly domain superfamily CLM98_11740 IPR035903 HesB-like domain superfamily CLM98_11740 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CLM98_11795 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_11795 IPR036291 NAD(P)-binding domain superfamily CLM98_11795 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_11845 IPR012340 Nucleic acid-binding, OB-fold CLM98_11845 IPR003512 Bacteriophage M13, G5P, DNA-binding CLM98_11875 IPR002938 FAD-binding domain CLM98_11875 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_11880 IPR032816 SNARE associated Golgi protein CLM98_11895 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_11895 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_11895 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_11905 IPR001466 Beta-lactamase-related CLM98_11905 IPR012338 Beta-lactamase/transpeptidase-like CLM98_11915 IPR001789 Signal transduction response regulator, receiver domain CLM98_11915 IPR011006 CheY-like superfamily CLM98_11915 IPR007492 LytTR DNA-binding domain CLM98_11920 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_11920 IPR010559 Signal transduction histidine kinase, internal region CLM98_11920 IPR003018 GAF domain CLM98_11920 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLM98_11920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_11935 IPR034061 Autotransporter serine protease peptidase domain CLM98_11935 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_11935 IPR036852 Peptidase S8/S53 domain superfamily CLM98_11935 IPR000209 Peptidase S8/S53 domain CLM98_11935 IPR005546 Autotransporter beta-domain CLM98_11935 IPR015500 Peptidase S8, subtilisin-related CLM98_11935 IPR036709 Autotransporter beta-domain superfamily CLM98_11945 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_11945 IPR006143 RND efflux pump, membrane fusion protein CLM98_11945 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CLM98_11950 IPR001036 Acriflavin resistance protein CLM98_11950 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11950 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_11960 IPR035965 PAS domain superfamily CLM98_11960 IPR013656 PAS fold-4 CLM98_11960 IPR000700 PAS-associated, C-terminal CLM98_11960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_11960 IPR000014 PAS domain CLM98_11960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11960 IPR001610 PAC motif CLM98_11960 IPR011006 CheY-like superfamily CLM98_11960 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_11960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_11960 IPR005467 Histidine kinase domain CLM98_11960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_11960 IPR001789 Signal transduction response regulator, receiver domain CLM98_11965 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_11965 IPR000792 Transcription regulator LuxR, C-terminal CLM98_11965 IPR011006 CheY-like superfamily CLM98_11965 IPR001789 Signal transduction response regulator, receiver domain CLM98_11970 IPR013425 Autotransporter-associated beta strand repeat CLM98_11970 IPR011050 Pectin lyase fold/virulence factor CLM98_11970 IPR012332 P22 tailspike-like, C-terminal domain superfamily CLM98_11970 IPR006315 Outer membrane autotransporter barrel CLM98_11970 IPR006315 Outer membrane autotransporter barrel CLM98_11970 IPR013425 Autotransporter-associated beta strand repeat CLM98_11970 IPR036709 Autotransporter beta-domain superfamily CLM98_11970 IPR005546 Autotransporter beta-domain CLM98_11970 IPR036709 Autotransporter beta-domain superfamily CLM98_11970 IPR012332 P22 tailspike-like, C-terminal domain superfamily CLM98_11970 IPR011050 Pectin lyase fold/virulence factor CLM98_11970 IPR005546 Autotransporter beta-domain CLM98_11975 IPR035919 EAL domain superfamily CLM98_11975 IPR000014 PAS domain CLM98_11975 IPR001610 PAC motif CLM98_11975 IPR000700 PAS-associated, C-terminal CLM98_11975 IPR029787 Nucleotide cyclase CLM98_11975 IPR000160 GGDEF domain CLM98_11975 IPR035965 PAS domain superfamily CLM98_11975 IPR013656 PAS fold-4 CLM98_11975 IPR001633 EAL domain CLM98_11975 IPR013655 PAS fold-3 CLM98_11995 IPR010287 Domain of unknown function DUF892 CLM98_11995 IPR012347 Ferritin-like CLM98_11995 IPR009078 Ferritin-like superfamily CLM98_12020 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_12020 IPR000878 Tetrapyrrole methylase CLM98_12020 IPR006367 Sirohaem synthase, N-terminal CLM98_12020 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLM98_12020 IPR035996 Tetrapyrrole methylase superfamily CLM98_12020 IPR019478 Sirohaem synthase, dimerisation domain CLM98_12020 IPR028281 Siroheme synthase, central domain CLM98_12020 IPR012409 Sirohaem synthase CLM98_12020 IPR006366 Uroporphyrin-III C-methyltransferase CLM98_12020 IPR036291 NAD(P)-binding domain superfamily CLM98_12020 IPR014776 Tetrapyrrole methylase, subdomain 2 CLM98_12035 IPR010290 Transmembrane secretion effector CLM98_12035 IPR020846 Major facilitator superfamily domain CLM98_12035 IPR036259 MFS transporter superfamily CLM98_12050 IPR036380 Isochorismatase-like superfamily CLM98_12050 IPR000868 Isochorismatase-like CLM98_12065 IPR001789 Signal transduction response regulator, receiver domain CLM98_12065 IPR011006 CheY-like superfamily CLM98_12065 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_12065 IPR000792 Transcription regulator LuxR, C-terminal CLM98_12085 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CLM98_12085 IPR005119 LysR, substrate-binding CLM98_12085 IPR000847 Transcription regulator HTH, LysR CLM98_12085 IPR036390 Winged helix DNA-binding domain superfamily CLM98_12085 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_12090 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CLM98_12090 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal CLM98_12090 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_12090 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CLM98_12090 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CLM98_12095 IPR018752 Uncharacterised protein family UPF0753 CLM98_12105 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_12105 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_12110 IPR007948 Protein of unknown function DUF736 CLM98_12115 IPR037518 MPN domain CLM98_12115 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_12115 IPR001405 Uncharacterised protein family UPF0758 CLM98_12115 IPR025657 RadC-like JAB domain CLM98_12140 IPR002104 Integrase, catalytic domain CLM98_12140 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_12140 IPR025166 Integrase, DNA-binding domain CLM98_12140 IPR038488 Integrase, DNA-binding domain superfamily CLM98_12140 IPR010998 Integrase/recombinase, N-terminal CLM98_12140 IPR013762 Integrase-like, catalytic domain superfamily CLM98_12150 IPR039423 TonB-dependent receptor-like CLM98_12150 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_12150 IPR010105 TonB-dependent siderophore receptor CLM98_12150 IPR010916 TonB box, conserved site CLM98_12150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_12150 IPR010917 TonB-dependent receptor, conserved site CLM98_12150 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_12150 IPR012910 TonB-dependent receptor, plug domain CLM98_12170 IPR037914 SpoVT-AbrB domain superfamily CLM98_12170 IPR007159 SpoVT-AbrB domain CLM98_12170 IPR039052 Antitoxin PemI-like CLM98_12195 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_12195 IPR039426 Vitamin B12 transporter BtuB-like CLM98_12195 IPR012910 TonB-dependent receptor, plug domain CLM98_12195 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_12195 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_12195 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_12195 IPR010917 TonB-dependent receptor, conserved site CLM98_12195 IPR010916 TonB box, conserved site CLM98_12205 IPR024399 Protein of unknown function DUF2628 CLM98_12230 IPR010129 Type I secretion membrane fusion protein, HlyD family CLM98_12230 IPR006144 Secretion protein HlyD, conserved site CLM98_12235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12235 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12235 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_12235 IPR039395 Peptidase C39-like A CLM98_12235 IPR010132 ATPase, type I secretion system, HlyB CLM98_12235 IPR017871 ABC transporter, conserved site CLM98_12235 IPR003439 ABC transporter-like CLM98_12235 IPR039421 Type I protein exporter CLM98_12235 IPR005074 Peptidase C39, bacteriocin processing CLM98_12235 IPR003593 AAA+ ATPase domain CLM98_12245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12245 IPR025669 AAA domain CLM98_12285 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLM98_12285 IPR023405 DNA topoisomerase, type IA, core domain CLM98_12285 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLM98_12285 IPR003601 DNA topoisomerase, type IA, domain 2 CLM98_12285 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLM98_12285 IPR000380 DNA topoisomerase, type IA CLM98_12285 IPR023406 DNA topoisomerase, type IA, active site CLM98_12285 IPR013497 DNA topoisomerase, type IA, central CLM98_12285 IPR006171 TOPRIM domain CLM98_12285 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CLM98_12285 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLM98_12285 IPR005738 DNA topoisomerase III CLM98_12290 IPR001525 C-5 cytosine methyltransferase CLM98_12290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_12290 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLM98_12340 IPR041527 YhcG, N-terminal CLM98_12340 IPR009362 YhcG PDDEXK nuclease domain CLM98_12350 IPR000620 EamA domain CLM98_12355 IPR000620 EamA domain CLM98_12365 IPR003680 Flavodoxin-like fold CLM98_12365 IPR029039 Flavoprotein-like superfamily CLM98_12370 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_12370 IPR004046 Glutathione S-transferase, C-terminal CLM98_12370 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_12370 IPR004045 Glutathione S-transferase, N-terminal CLM98_12370 IPR036249 Thioredoxin-like superfamily CLM98_12375 IPR008794 Proline racemase family CLM98_12380 IPR029039 Flavoprotein-like superfamily CLM98_12380 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CLM98_12380 IPR005025 NADPH-dependent FMN reductase-like CLM98_12380 IPR010089 Flavoprotein WrbA-like CLM98_12380 IPR008254 Flavodoxin/nitric oxide synthase CLM98_12390 IPR020846 Major facilitator superfamily domain CLM98_12390 IPR004747 Cyanate transport system protein CLM98_12390 IPR011701 Major facilitator superfamily CLM98_12390 IPR036259 MFS transporter superfamily CLM98_12395 IPR003313 AraC-type arabinose-binding/dimerisation domain CLM98_12395 IPR009057 Homeobox-like domain superfamily CLM98_12395 IPR018060 DNA binding HTH domain, AraC-type CLM98_12395 IPR018062 HTH domain AraC-type, conserved site CLM98_12395 IPR014710 RmlC-like jelly roll fold CLM98_12395 IPR011051 RmlC-like cupin domain superfamily CLM98_12545 IPR022161 DNA helicase IV, N-terminal domain CLM98_12545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12545 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_12545 IPR000212 DNA helicase, UvrD/REP type CLM98_12545 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_12545 IPR034739 UvrD/AddA helicase, N-terminal CLM98_12620 IPR037424 Regulatory protein NocR, PBP2 domain CLM98_12620 IPR036390 Winged helix DNA-binding domain superfamily CLM98_12620 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_12620 IPR000847 Transcription regulator HTH, LysR CLM98_12620 IPR005119 LysR, substrate-binding CLM98_12625 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_12625 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_12625 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_12625 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLM98_12625 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_12625 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_12625 IPR036291 NAD(P)-binding domain superfamily CLM98_12630 IPR042100 Bordetella uptake gene, domain 1 CLM98_12630 IPR005064 Bordetella uptake gene CLM98_12645 IPR025657 RadC-like JAB domain CLM98_12645 IPR001405 Uncharacterised protein family UPF0758 CLM98_12645 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_12645 IPR010994 RuvA domain 2-like CLM98_12645 IPR037518 MPN domain CLM98_12680 IPR010998 Integrase/recombinase, N-terminal CLM98_12680 IPR025166 Integrase, DNA-binding domain CLM98_12680 IPR038488 Integrase, DNA-binding domain superfamily CLM98_12680 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_12680 IPR013762 Integrase-like, catalytic domain superfamily CLM98_12680 IPR002104 Integrase, catalytic domain CLM98_12685 IPR017926 Glutamine amidotransferase CLM98_12685 IPR022310 NAD/GMP synthase CLM98_12685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_12685 IPR022955 GMP synthase CLM98_12685 IPR004739 GMP synthase, glutamine amidotransferase CLM98_12685 IPR029062 Class I glutamine amidotransferase-like CLM98_12685 IPR025777 GMP synthetase ATP pyrophosphatase domain CLM98_12685 IPR001674 GMP synthase, C-terminal CLM98_12690 IPR001093 IMP dehydrogenase/GMP reductase CLM98_12690 IPR005990 Inosine-5'-monophosphate dehydrogenase CLM98_12690 IPR000644 CBS domain CLM98_12690 IPR013785 Aldolase-type TIM barrel CLM98_12690 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLM98_12695 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLM98_12695 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLM98_12695 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CLM98_12695 IPR036291 NAD(P)-binding domain superfamily CLM98_12695 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CLM98_12705 IPR036291 NAD(P)-binding domain superfamily CLM98_12705 IPR003148 Regulator of K+ conductance, N-terminal CLM98_12705 IPR038770 Sodium/solute symporter superfamily CLM98_12705 IPR006153 Cation/H+ exchanger CLM98_12705 IPR004771 K+/H+ exchanger CLM98_12710 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_12710 IPR005835 Nucleotidyl transferase domain CLM98_12710 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CLM98_12715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_12715 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLM98_12715 IPR036291 NAD(P)-binding domain superfamily CLM98_12720 IPR000715 Glycosyl transferase, family 4 CLM98_12725 IPR041166 LapB, rubredoxin metal binding domain CLM98_12725 IPR019734 Tetratricopeptide repeat CLM98_12725 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_12725 IPR013026 Tetratricopeptide repeat-containing domain CLM98_12725 IPR030865 Lipopolysaccharide assembly protein B CLM98_12735 IPR005685 Integration host factor, beta subunit CLM98_12735 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLM98_12735 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_12735 IPR000119 Histone-like DNA-binding protein CLM98_12740 IPR022967 RNA-binding domain, S1 CLM98_12740 IPR012340 Nucleic acid-binding, OB-fold CLM98_12740 IPR003029 S1 domain CLM98_12740 IPR000110 Ribosomal protein S1 CLM98_12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12745 IPR011994 Cytidylate kinase domain CLM98_12745 IPR003136 Cytidylate kinase CLM98_12750 IPR035977 Ribosomal protein L36 superfamily CLM98_12750 IPR000473 Ribosomal protein L36 CLM98_12765 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CLM98_12765 IPR017754 Agmatine deiminase CLM98_12770 IPR036526 Carbon-nitrogen hydrolase superfamily CLM98_12770 IPR003010 Carbon-nitrogen hydrolase CLM98_12770 IPR001110 Uncharacterised protein family UPF0012, conserved site CLM98_12775 IPR000182 GNAT domain CLM98_12775 IPR016181 Acyl-CoA N-acyltransferase CLM98_12795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_12795 IPR035906 MetI-like superfamily CLM98_12800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_12800 IPR035906 MetI-like superfamily CLM98_12820 IPR000843 LacI-type HTH domain CLM98_12820 IPR028082 Periplasmic binding protein-like I CLM98_12820 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_12830 IPR011008 Dimeric alpha-beta barrel CLM98_12830 IPR005545 YCII-related CLM98_12835 IPR003768 Segregation and condensation protein A CLM98_12840 IPR005234 Chromosome segregation/condensation protein ScpB CLM98_12840 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_12840 IPR036390 Winged helix DNA-binding domain superfamily CLM98_12845 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLM98_12845 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_12845 IPR002942 RNA-binding S4 domain CLM98_12845 IPR036986 RNA-binding S4 domain superfamily CLM98_12845 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_12845 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_12845 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_12860 IPR036526 Carbon-nitrogen hydrolase superfamily CLM98_12860 IPR003010 Carbon-nitrogen hydrolase CLM98_12860 IPR001110 Uncharacterised protein family UPF0012, conserved site CLM98_12865 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_12865 IPR004839 Aminotransferase, class I/classII CLM98_12865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_12865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_12870 IPR003593 AAA+ ATPase domain CLM98_12870 IPR017871 ABC transporter, conserved site CLM98_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12870 IPR005895 ABC transporter, haem export, CcmA CLM98_12870 IPR003439 ABC transporter-like CLM98_12875 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CLM98_12875 IPR003544 Cytochrome c-type biogenesis protein CcmB CLM98_12880 IPR002541 Cytochrome c assembly protein CLM98_12880 IPR003557 Cytochrome c-type biogenesis protein CcmC CLM98_12890 IPR036127 CcmE-like superfamily CLM98_12890 IPR004329 CcmE/CycJ protein CLM98_12895 IPR003568 Cytochrome c-type biogenesis protein CcmF CLM98_12895 IPR002541 Cytochrome c assembly protein CLM98_12895 IPR003567 Cytochrome c-type biogenesis protein CLM98_12895 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CLM98_12900 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLM98_12900 IPR013766 Thioredoxin domain CLM98_12900 IPR036249 Thioredoxin-like superfamily CLM98_12900 IPR013740 Redoxin CLM98_12900 IPR017937 Thioredoxin, conserved site CLM98_12905 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CLM98_12905 IPR005616 CcmH/CycL/Ccl2/NrfF family CLM98_12910 IPR017560 Cytochrome c-type biogenesis protein CcmI CLM98_12910 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_12910 IPR019734 Tetratricopeptide repeat CLM98_12910 IPR013026 Tetratricopeptide repeat-containing domain CLM98_12915 IPR000073 Alpha/beta hydrolase fold-1 CLM98_12915 IPR008220 Homoserine/serine acetyltransferase MetX-like CLM98_12915 IPR029058 Alpha/Beta hydrolase fold CLM98_12920 IPR002059 Cold-shock protein, DNA-binding CLM98_12920 IPR019844 Cold-shock (CSD) domain CLM98_12920 IPR012156 Cold shock, CspA CLM98_12920 IPR012340 Nucleic acid-binding, OB-fold CLM98_12920 IPR011129 Cold shock domain CLM98_12925 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12925 IPR003593 AAA+ ATPase domain CLM98_12925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12925 IPR017871 ABC transporter, conserved site CLM98_12925 IPR003439 ABC transporter-like CLM98_12925 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CLM98_12925 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_12930 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CLM98_12930 IPR039421 Type I protein exporter CLM98_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12930 IPR003593 AAA+ ATPase domain CLM98_12930 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12930 IPR017871 ABC transporter, conserved site CLM98_12930 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_12930 IPR003439 ABC transporter-like CLM98_12935 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CLM98_12940 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CLM98_12960 IPR005674 CocE/Serine esterase CLM98_12960 IPR008979 Galactose-binding-like domain superfamily CLM98_12960 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CLM98_12960 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CLM98_12960 IPR029058 Alpha/Beta hydrolase fold CLM98_12970 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_12970 IPR000965 GPR domain CLM98_12970 IPR012134 Glutamate-5-semialdehyde dehydrogenase CLM98_12970 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CLM98_12970 IPR015590 Aldehyde dehydrogenase domain CLM98_12970 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_12970 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_12975 IPR036974 PUA domain superfamily CLM98_12975 IPR041739 Glutamate-5-kinase domain CLM98_12975 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_12975 IPR011529 Glutamate 5-kinase CLM98_12975 IPR036393 Acetylglutamate kinase-like superfamily CLM98_12975 IPR015947 PUA-like superfamily CLM98_12975 IPR001057 Glutamate/acetylglutamate kinase CLM98_12975 IPR002478 PUA domain CLM98_12975 IPR019797 Glutamate 5-kinase, conserved site CLM98_12975 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CLM98_12985 IPR024083 Fumarase/histidase, N-terminal CLM98_12985 IPR020557 Fumarate lyase, conserved site CLM98_12985 IPR000362 Fumarate lyase family CLM98_12985 IPR022761 Fumarate lyase, N-terminal CLM98_12985 IPR009049 Argininosuccinate lyase CLM98_12985 IPR008948 L-Aspartase-like CLM98_12990 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLM98_12990 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CLM98_12990 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CLM98_12990 IPR036291 NAD(P)-binding domain superfamily CLM98_13000 IPR016181 Acyl-CoA N-acyltransferase CLM98_13000 IPR004662 Acetylglutamate kinase family CLM98_13000 IPR036393 Acetylglutamate kinase-like superfamily CLM98_13000 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type CLM98_13000 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain CLM98_13000 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_13000 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing CLM98_13015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13015 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CLM98_13015 IPR023434 Argininosuccinate synthase, type 1 subfamily CLM98_13015 IPR018223 Argininosuccinate synthase, conserved site CLM98_13015 IPR001518 Argininosuccinate synthase CLM98_13020 IPR006130 Aspartate/ornithine carbamoyltransferase CLM98_13020 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CLM98_13020 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLM98_13020 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLM98_13030 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_13030 IPR032678 tRNA synthetases class I, catalytic domain CLM98_13030 IPR015803 Cysteine-tRNA ligase CLM98_13030 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CLM98_13030 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CLM98_13030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13035 IPR023939 Cysteine desulfuration protein SufE CLM98_13035 IPR003808 Fe-S metabolism associated domain, SufE-like CLM98_13045 IPR000962 Zinc finger, DksA/TraR C4-type CLM98_13045 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CLM98_13045 IPR037187 DksA, N-terminal domain superfamily CLM98_13045 IPR012784 RNA polymerase-binding transcription factor DksA CLM98_13050 IPR002696 Putative membrane protein insertion efficiency factor CLM98_13055 IPR004722 Dihydroorotase CLM98_13055 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLM98_13055 IPR002195 Dihydroorotase, conserved site CLM98_13055 IPR032466 Metal-dependent hydrolase CLM98_13055 IPR006680 Amidohydrolase-related CLM98_13060 IPR011055 Duplicated hybrid motif CLM98_13060 IPR016047 Peptidase M23 CLM98_13060 IPR003646 SH3-like domain, bacterial-type CLM98_13080 IPR013785 Aldolase-type TIM barrel CLM98_13080 IPR010628 Ethanolamine ammonia lyase large subunit CLM98_13085 IPR009246 Ethanolamine ammonia-lyase light chain CLM98_13085 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal CLM98_13085 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal CLM98_13095 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_13095 IPR001279 Metallo-beta-lactamase CLM98_13130 IPR012334 Pectin lyase fold CLM98_13130 IPR011050 Pectin lyase fold/virulence factor CLM98_13130 IPR000743 Glycoside hydrolase, family 28 CLM98_13140 IPR006439 HAD hydrolase, subfamily IA CLM98_13140 IPR041492 Haloacid dehalogenase-like hydrolase CLM98_13140 IPR036412 HAD-like superfamily CLM98_13140 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLM98_13140 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLM98_13140 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLM98_13140 IPR023214 HAD superfamily CLM98_13145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_13145 IPR010233 Ubiquinone biosynthesis O-methyltransferase CLM98_13150 IPR032466 Metal-dependent hydrolase CLM98_13150 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLM98_13150 IPR023512 Deaminase MtaD/DadD CLM98_13150 IPR006680 Amidohydrolase-related CLM98_13160 IPR020599 Translation elongation factor P/YeiP CLM98_13160 IPR013852 Translation elongation factor P/YeiP, conserved site CLM98_13160 IPR013185 Translation elongation factor, KOW-like CLM98_13160 IPR001059 Translation elongation factor P/YeiP, central CLM98_13160 IPR008991 Translation protein SH3-like domain superfamily CLM98_13160 IPR011768 Translation elongation factor P CLM98_13160 IPR012340 Nucleic acid-binding, OB-fold CLM98_13160 IPR014722 Ribosomal protein L2, domain 2 CLM98_13160 IPR015365 Elongation factor P, C-terminal CLM98_13165 IPR013785 Aldolase-type TIM barrel CLM98_13165 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CLM98_13165 IPR007197 Radical SAM CLM98_13165 IPR022462 Lysine-2,3-aminomutase-like CLM98_13170 IPR035965 PAS domain superfamily CLM98_13170 IPR035919 EAL domain superfamily CLM98_13170 IPR000160 GGDEF domain CLM98_13170 IPR000014 PAS domain CLM98_13170 IPR001633 EAL domain CLM98_13170 IPR029787 Nucleotide cyclase CLM98_13170 IPR005330 MHYT domain CLM98_13180 IPR004384 RNA methyltransferase TrmJ/LasT CLM98_13180 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_13180 IPR029028 Alpha/beta knot methyltransferases CLM98_13180 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_13185 IPR020583 Inositol monophosphatase, metal-binding site CLM98_13185 IPR020550 Inositol monophosphatase, conserved site CLM98_13185 IPR022337 Inositol monophosphatase, SuhB CLM98_13185 IPR000760 Inositol monophosphatase-like CLM98_13185 IPR033942 Inositol monophosphatase CLM98_13190 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLM98_13190 IPR019833 Manganese/iron superoxide dismutase, binding site CLM98_13190 IPR001189 Manganese/iron superoxide dismutase CLM98_13190 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CLM98_13190 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLM98_13190 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CLM98_13195 IPR000026 Guanine-specific ribonuclease N1/T1/U2 CLM98_13195 IPR016191 Ribonuclease/ribotoxin CLM98_13215 IPR011545 DEAD/DEAH box helicase domain CLM98_13215 IPR014014 RNA helicase, DEAD-box type, Q motif CLM98_13215 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLM98_13215 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CLM98_13215 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLM98_13215 IPR001650 Helicase, C-terminal CLM98_13215 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_13215 IPR028619 ATP-dependent RNA helicase DbpA CLM98_13215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13220 IPR029057 Phosphoribosyltransferase-like CLM98_13220 IPR000836 Phosphoribosyltransferase domain CLM98_13220 IPR005764 Adenine phosphoribosyl transferase CLM98_13225 IPR003846 Protein adenylyltransferase SelO CLM98_13230 IPR019826 Carboxylesterase type B, active site CLM98_13230 IPR029058 Alpha/Beta hydrolase fold CLM98_13230 IPR002018 Carboxylesterase, type B CLM98_13230 IPR019819 Carboxylesterase type B, conserved site CLM98_13235 IPR004046 Glutathione S-transferase, C-terminal CLM98_13235 IPR005955 Glutathione S-transferases, class Zeta CLM98_13235 IPR040079 Glutathione Transferase family CLM98_13235 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CLM98_13235 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_13235 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_13235 IPR036249 Thioredoxin-like superfamily CLM98_13235 IPR004045 Glutathione S-transferase, N-terminal CLM98_13235 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CLM98_13240 IPR012156 Cold shock, CspA CLM98_13240 IPR011129 Cold shock domain CLM98_13240 IPR019844 Cold-shock (CSD) domain CLM98_13240 IPR012340 Nucleic acid-binding, OB-fold CLM98_13240 IPR002059 Cold-shock protein, DNA-binding CLM98_13245 IPR011335 Restriction endonuclease type II-like CLM98_13245 IPR009822 YaeQ CLM98_13245 IPR038590 YaeQ superfamily CLM98_13250 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_13250 IPR023166 HI0933-like insert domain superfamily CLM98_13250 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CLM98_13255 IPR035919 EAL domain superfamily CLM98_13255 IPR011006 CheY-like superfamily CLM98_13255 IPR001789 Signal transduction response regulator, receiver domain CLM98_13255 IPR029787 Nucleotide cyclase CLM98_13255 IPR000160 GGDEF domain CLM98_13255 IPR001633 EAL domain CLM98_13260 IPR022919 Peptidase M48, protease HtpX, putative CLM98_13260 IPR001915 Peptidase M48 CLM98_13265 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CLM98_13265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13265 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_13265 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_13270 IPR036291 NAD(P)-binding domain superfamily CLM98_13270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_13270 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_13270 IPR011283 Acetoacetyl-CoA reductase CLM98_13275 IPR007897 PHB accumulation regulatory CLM98_13275 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CLM98_13275 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CLM98_13295 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_13295 IPR014762 DNA mismatch repair, conserved site CLM98_13295 IPR020667 DNA mismatch repair protein, MutL CLM98_13295 IPR002099 DNA mismatch repair protein family, N-terminal CLM98_13295 IPR042120 MutL, C-terminal domain, dimerisation subdomain CLM98_13295 IPR014790 MutL, C-terminal, dimerisation CLM98_13295 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CLM98_13295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_13295 IPR037198 MutL, C-terminal domain superfamily CLM98_13295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_13295 IPR042121 MutL, C-terminal domain, regulatory subdomain CLM98_13295 IPR013507 DNA mismatch repair protein, S5 domain 2-like CLM98_13300 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CLM98_13300 IPR021731 AMIN domain CLM98_13300 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_13305 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CLM98_13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13310 IPR017953 Carbohydrate kinase, predicted, conserved site CLM98_13310 IPR036652 YjeF N-terminal domain superfamily CLM98_13310 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CLM98_13310 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CLM98_13310 IPR029056 Ribokinase-like CLM98_13310 IPR004443 YjeF N-terminal domain CLM98_13315 IPR004453 Epoxyqueuosine reductase QueG CLM98_13315 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_13315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_13315 IPR013542 Domain of unknown function DUF1730 CLM98_13320 IPR003753 Exonuclease VII, large subunit CLM98_13320 IPR020579 Exonuclease VII, large subunit, C-terminal CLM98_13320 IPR025824 OB-fold nucleic acid binding domain CLM98_13330 IPR042095 Sulfatase-modifying factor enzyme superfamily CLM98_13330 IPR005532 Sulfatase-modifying factor enzyme CLM98_13330 IPR016187 C-type lectin fold CLM98_13345 IPR036397 Ribonuclease H superfamily CLM98_13345 IPR012337 Ribonuclease H-like superfamily CLM98_13345 IPR002562 3'-5' exonuclease domain CLM98_13345 IPR006292 Ribonuclease D CLM98_13345 IPR010997 HRDC-like superfamily CLM98_13345 IPR002121 HRDC domain CLM98_13350 IPR014144 DNA ligase D, 3'-phosphoesterase domain CLM98_13350 IPR012309 DNA ligase, ATP-dependent, C-terminal CLM98_13350 IPR012310 DNA ligase, ATP-dependent, central CLM98_13350 IPR033651 LigD polymerase domain, PaeLigD-type CLM98_13350 IPR014143 DNA ligase D CLM98_13350 IPR012340 Nucleic acid-binding, OB-fold CLM98_13350 IPR014145 DNA ligase D, polymerase domain CLM98_13350 IPR014146 DNA ligase D, ligase domain CLM98_13370 IPR002104 Integrase, catalytic domain CLM98_13370 IPR013762 Integrase-like, catalytic domain superfamily CLM98_13370 IPR035069 TTHA1013/TTHA0281-like CLM98_13370 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_13370 IPR010998 Integrase/recombinase, N-terminal CLM98_13425 IPR024082 Proline dehydrogenase PutA, domain II CLM98_13425 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_13425 IPR013321 Arc-type ribbon-helix-helix CLM98_13425 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_13425 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_13425 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_13425 IPR002872 Proline dehydrogenase domain CLM98_13425 IPR010985 Ribbon-helix-helix CLM98_13425 IPR024089 Proline dehydrogenase PutA, domain I/II CLM98_13425 IPR024090 Proline dehydrogenase PutA, domain I CLM98_13425 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_13425 IPR015590 Aldehyde dehydrogenase domain CLM98_13425 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CLM98_13425 IPR029041 FAD-linked oxidoreductase-like CLM98_13425 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CLM98_13425 IPR025703 Bifunctional protein PutA CLM98_13440 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_13440 IPR006120 Resolvase, HTH domain CLM98_13440 IPR006118 Recombinase, conserved site CLM98_13440 IPR006119 Resolvase, N-terminal catalytic domain CLM98_13455 IPR003356 DNA methylase, adenine-specific CLM98_13455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_13460 IPR019072 Restriction endonuclease, type II, XamI CLM98_13515 IPR002545 CheW-like domain CLM98_13515 IPR036061 CheW-like domain superfamily CLM98_13515 IPR039315 Chemotaxis protein CheW CLM98_13520 IPR003660 HAMP domain CLM98_13520 IPR033479 Double Cache domain 1 CLM98_13520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_13520 IPR029151 Periplasmic sensor-like domain superfamily CLM98_13520 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_13525 IPR036995 Methylpurine-DNA glycosylase superfamily CLM98_13525 IPR003180 Methylpurine-DNA glycosylase CLM98_13525 IPR011034 Formyl transferase-like, C-terminal domain superfamily CLM98_13530 IPR013701 DEAD/H associated CLM98_13530 IPR011545 DEAD/DEAH box helicase domain CLM98_13530 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_13530 IPR001650 Helicase, C-terminal CLM98_13530 IPR003593 AAA+ ATPase domain CLM98_13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13550 IPR007481 Stringent starvation protein B CLM98_13550 IPR036760 SspB-like superfamily CLM98_13555 IPR004046 Glutathione S-transferase, C-terminal CLM98_13555 IPR034341 Stringent starvation protein A, N-terminal CLM98_13555 IPR004045 Glutathione S-transferase, N-terminal CLM98_13555 IPR040079 Glutathione Transferase family CLM98_13555 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_13555 IPR036249 Thioredoxin-like superfamily CLM98_13555 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_13560 IPR002326 Cytochrome c1 CLM98_13560 IPR036909 Cytochrome c-like domain superfamily CLM98_13560 IPR009056 Cytochrome c-like domain CLM98_13565 IPR016174 Di-haem cytochrome, transmembrane CLM98_13565 IPR005797 Cytochrome b/b6, N-terminal CLM98_13565 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CLM98_13565 IPR027387 Cytochrome b/b6-like domain superfamily CLM98_13565 IPR030689 Cytochrome b CLM98_13565 IPR005798 Cytochrome b/b6, C-terminal CLM98_13570 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CLM98_13570 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CLM98_13570 IPR005805 Rieske iron-sulphur protein, C-terminal CLM98_13570 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLM98_13570 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_13570 IPR014349 Rieske iron-sulphur protein CLM98_13580 IPR008258 Transglycosylase SLT domain 1 CLM98_13580 IPR023346 Lysozyme-like domain superfamily CLM98_13580 IPR000189 Prokaryotic transglycosylase, active site CLM98_13595 IPR013848 Methylthiotransferase, N-terminal CLM98_13595 IPR020612 Methylthiotransferase, conserved site CLM98_13595 IPR005839 Methylthiotransferase CLM98_13595 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLM98_13595 IPR006638 Elp3/MiaB/NifB CLM98_13595 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CLM98_13595 IPR007197 Radical SAM CLM98_13595 IPR002792 TRAM domain CLM98_13595 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_13600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13600 IPR003714 PhoH-like protein CLM98_13610 IPR020549 Endoribonuclease YbeY, conserved site CLM98_13610 IPR002036 Endoribonuclease YbeY CLM98_13610 IPR023091 Metalloprotease catalytic domain superfamily, predicted CLM98_13620 IPR005170 Transporter-associated domain CLM98_13620 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_13620 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_13620 IPR000644 CBS domain CLM98_13635 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_13635 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_13635 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_13635 IPR015590 Aldehyde dehydrogenase domain CLM98_13640 IPR035906 MetI-like superfamily CLM98_13640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_13645 IPR035906 MetI-like superfamily CLM98_13645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_13650 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_13650 IPR013611 Transport-associated OB, type 2 CLM98_13650 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLM98_13650 IPR017871 ABC transporter, conserved site CLM98_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13650 IPR003439 ABC transporter-like CLM98_13650 IPR003593 AAA+ ATPase domain CLM98_13655 IPR003423 Outer membrane efflux protein CLM98_13655 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_13660 IPR011701 Major facilitator superfamily CLM98_13660 IPR020846 Major facilitator superfamily domain CLM98_13660 IPR036259 MFS transporter superfamily CLM98_13660 IPR004638 Drug resistance transporter EmrB-like CLM98_13665 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLM98_13670 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CLM98_13670 IPR006059 Bacterial extracellular solute-binding protein CLM98_13675 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_13675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_13675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_13675 IPR005814 Aminotransferase class-III CLM98_13680 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_13680 IPR036651 Glutamine synthetase, N-terminal domain superfamily CLM98_13680 IPR008146 Glutamine synthetase, catalytic domain CLM98_13685 IPR011697 Peptidase C26 CLM98_13685 IPR029062 Class I glutamine amidotransferase-like CLM98_13685 IPR017926 Glutamine amidotransferase CLM98_13690 IPR008146 Glutamine synthetase, catalytic domain CLM98_13690 IPR027303 Glutamine synthetase, glycine-rich site CLM98_13690 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_13690 IPR036651 Glutamine synthetase, N-terminal domain superfamily CLM98_13695 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_13695 IPR006076 FAD dependent oxidoreductase CLM98_13700 IPR001789 Signal transduction response regulator, receiver domain CLM98_13700 IPR029787 Nucleotide cyclase CLM98_13700 IPR000160 GGDEF domain CLM98_13700 IPR011006 CheY-like superfamily CLM98_13705 IPR023504 Bacteriohemerythrin-like protein CLM98_13705 IPR012312 Haemerythrin-like CLM98_13705 IPR016131 Haemerythrin, iron-binding site CLM98_13705 IPR035938 Hemerythrin-like superfamily CLM98_13705 IPR012827 Haemerythrin, metal-binding domain CLM98_13710 IPR005828 Major facilitator, sugar transporter-like CLM98_13710 IPR005829 Sugar transporter, conserved site CLM98_13710 IPR020846 Major facilitator superfamily domain CLM98_13710 IPR011701 Major facilitator superfamily CLM98_13710 IPR004736 MFS transporter, metabolite:H symporter CLM98_13710 IPR036259 MFS transporter superfamily CLM98_13720 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain CLM98_13720 IPR037951 YdeP-like, MopB domain CLM98_13720 IPR010046 Oxidoreductase alpha (molybdopterin) subunit CLM98_13720 IPR006656 Molybdopterin oxidoreductase CLM98_13720 IPR009010 Aspartate decarboxylase-like domain superfamily CLM98_13725 IPR003786 Sulfur carrier protein FdhD CLM98_13725 IPR016193 Cytidine deaminase-like CLM98_13730 IPR020846 Major facilitator superfamily domain CLM98_13730 IPR011701 Major facilitator superfamily CLM98_13730 IPR004741 Oxalate/formate antiporter family transporter CLM98_13730 IPR026355 Oxalate/formate antiporter CLM98_13730 IPR036259 MFS transporter superfamily CLM98_13745 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_13745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_13745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_13745 IPR005814 Aminotransferase class-III CLM98_13755 IPR007383 Protein of unknown function DUF445 CLM98_13760 IPR011006 CheY-like superfamily CLM98_13760 IPR019247 Histidine kinase BarA, N-terminal CLM98_13760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_13760 IPR001789 Signal transduction response regulator, receiver domain CLM98_13760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_13760 IPR005467 Histidine kinase domain CLM98_13760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_13760 IPR003660 HAMP domain CLM98_13760 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_13760 IPR036641 HPT domain superfamily CLM98_13760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_13760 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_13765 IPR011006 CheY-like superfamily CLM98_13765 IPR001789 Signal transduction response regulator, receiver domain CLM98_13765 IPR037522 HD-GYP domain CLM98_13765 IPR003607 HD/PDEase domain CLM98_13770 IPR004638 Drug resistance transporter EmrB-like CLM98_13770 IPR020846 Major facilitator superfamily domain CLM98_13770 IPR011701 Major facilitator superfamily CLM98_13770 IPR036259 MFS transporter superfamily CLM98_13780 IPR036291 NAD(P)-binding domain superfamily CLM98_13780 IPR007780 NAD-glutamate dehydrogenase, bacteria CLM98_13780 IPR028971 NAD-glutamate dehydrogenase CLM98_13790 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_13790 IPR006143 RND efflux pump, membrane fusion protein CLM98_13795 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_13795 IPR001036 Acriflavin resistance protein CLM98_13795 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_13800 IPR012310 DNA ligase, ATP-dependent, central CLM98_13800 IPR028082 Periplasmic binding protein-like I CLM98_13800 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_13800 IPR000843 LacI-type HTH domain CLM98_13805 IPR035895 HPr-like superfamily CLM98_13805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_13805 IPR036618 PtsI, HPr-binding domain superfamily CLM98_13805 IPR000032 Phosphocarrier protein HPr-like CLM98_13805 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLM98_13805 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLM98_13805 IPR008731 Phosphotransferase system, enzyme I N-terminal CLM98_13805 IPR018274 PEP-utilising enzyme, active site CLM98_13805 IPR002178 PTS EIIA type-2 domain CLM98_13805 IPR008279 PEP-utilising enzyme, mobile domain CLM98_13805 IPR006318 Phosphotransferase system, enzyme I-like CLM98_13805 IPR040442 Pyruvate kinase-like domain superfamily CLM98_13805 IPR016152 Phosphotransferase/anion transporter CLM98_13805 IPR036637 Phosphohistidine domain superfamily CLM98_13805 IPR000121 PEP-utilising enzyme, C-terminal CLM98_13805 IPR023151 PEP-utilising enzyme, conserved site CLM98_13810 IPR022463 Fructose 1-phosphate kinase CLM98_13810 IPR017583 Tagatose/fructose phosphokinase CLM98_13810 IPR011611 Carbohydrate kinase PfkB CLM98_13810 IPR029056 Ribokinase-like CLM98_13810 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_13815 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLM98_13815 IPR013011 Phosphotransferase system, EIIB component, type 2 CLM98_13815 IPR036095 PTS system IIB component-like superfamily CLM98_13815 IPR006327 Phosphotransferase system, fructose IIC component CLM98_13815 IPR013014 Phosphotransferase system, EIIC component, type 2 CLM98_13815 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CLM98_13855 IPR005665 Protein-export membrane protein SecF, bacterial CLM98_13855 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLM98_13855 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLM98_13855 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLM98_13860 IPR005791 Protein translocase subunit SecD CLM98_13860 IPR027398 SecD export protein N-terminal TM domain CLM98_13860 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLM98_13860 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLM98_13860 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLM98_13865 IPR003849 Preprotein translocase YajC CLM98_13870 IPR002616 tRNA-guanine(15) transglycosylase-like CLM98_13870 IPR004803 tRNA-guanine transglycosylase CLM98_13870 IPR036511 Queuine tRNA-ribosyltransferase-like CLM98_13875 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CLM98_13875 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CLM98_13875 IPR042118 QueA, domain 1 CLM98_13875 IPR042119 QueA, domain 2 CLM98_13910 IPR000836 Phosphoribosyltransferase domain CLM98_13910 IPR029057 Phosphoribosyltransferase-like CLM98_13910 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CLM98_13910 IPR005765 Uracil phosphoribosyl transferase CLM98_13915 IPR008928 Six-hairpin glycosidase superfamily CLM98_13915 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_13915 IPR018221 Glycoside hydrolase family 9, His active site CLM98_13915 IPR004197 Cellulase, Ig-like domain CLM98_13915 IPR001701 Glycoside hydrolase family 9 CLM98_13915 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites CLM98_13915 IPR014756 Immunoglobulin E-set CLM98_13915 IPR013783 Immunoglobulin-like fold CLM98_13920 IPR000101 Gamma-glutamyltranspeptidase CLM98_13920 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_13925 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_13925 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_13940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13940 IPR001980 Phosphopantetheine adenylyltransferase CLM98_13940 IPR004821 Cytidyltransferase-like domain CLM98_13945 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_13945 IPR004398 RNA methyltransferase, RsmD CLM98_13945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_13950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_13950 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_13950 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_13950 IPR001404 Heat shock protein Hsp90 family CLM98_13950 IPR037196 HSP90, C-terminal domain CLM98_13950 IPR019805 Heat shock protein Hsp90, conserved site CLM98_13950 IPR020575 Heat shock protein Hsp90, N-terminal CLM98_13970 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_13970 IPR010916 TonB box, conserved site CLM98_13970 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_13970 IPR010917 TonB-dependent receptor, conserved site CLM98_13970 IPR039426 Vitamin B12 transporter BtuB-like CLM98_13970 IPR012910 TonB-dependent receptor, plug domain CLM98_13970 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_13970 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_13980 IPR006710 Glycoside hydrolase, family 43 CLM98_13980 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_13985 IPR008928 Six-hairpin glycosidase superfamily CLM98_13985 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_13985 IPR011081 Bacterial Ig-related CLM98_13985 IPR008979 Galactose-binding-like domain superfamily CLM98_13985 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_13985 IPR013783 Immunoglobulin-like fold CLM98_13995 IPR010916 TonB box, conserved site CLM98_13995 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_13995 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_13995 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_13995 IPR012910 TonB-dependent receptor, plug domain CLM98_13995 IPR039426 Vitamin B12 transporter BtuB-like CLM98_13995 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_13995 IPR010917 TonB-dependent receptor, conserved site CLM98_14005 IPR000209 Peptidase S8/S53 domain CLM98_14005 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_14005 IPR036852 Peptidase S8/S53 domain superfamily CLM98_14005 IPR030400 Sedolisin domain CLM98_14005 IPR015366 Peptidase S53, activation domain CLM98_14035 IPR002293 Amino acid/polyamine transporter I CLM98_14050 IPR036005 Creatinase/aminopeptidase-like CLM98_14050 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_14050 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_14050 IPR000587 Creatinase, N-terminal CLM98_14050 IPR000994 Peptidase M24 CLM98_14050 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLM98_14055 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_14055 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_14055 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_14055 IPR015590 Aldehyde dehydrogenase domain CLM98_14060 IPR020624 Schiff base-forming aldolase, conserved site CLM98_14060 IPR020625 Schiff base-forming aldolase, active site CLM98_14060 IPR002220 DapA-like CLM98_14060 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLM98_14060 IPR013785 Aldolase-type TIM barrel CLM98_14065 IPR023753 FAD/NAD(P)-binding domain CLM98_14065 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B CLM98_14065 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CLM98_14065 IPR007419 BFD-like [2Fe-2S]-binding domain CLM98_14065 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_14075 IPR012727 Glycine oxidase ThiO CLM98_14075 IPR006076 FAD dependent oxidoreductase CLM98_14075 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_14080 IPR008794 Proline racemase family CLM98_14090 IPR013822 Signal recognition particle SRP54, helical bundle CLM98_14090 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_14090 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CLM98_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14090 IPR036225 SRP/SRP receptor, N-terminal CLM98_14090 IPR003593 AAA+ ATPase domain CLM98_14090 IPR004390 Signal-recognition particle receptor FtsY CLM98_14100 IPR000445 Helix-hairpin-helix motif CLM98_14100 IPR004035 Endonuclease III, iron-sulphur binding site CLM98_14100 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLM98_14100 IPR029119 MutY, C-terminal CLM98_14100 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_14100 IPR004036 Endonuclease III-like, conserved site-2 CLM98_14100 IPR011257 DNA glycosylase CLM98_14100 IPR005760 A/G-specific adenine glycosylase MutY CLM98_14100 IPR003265 HhH-GPD domain CLM98_14100 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLM98_14105 IPR007457 Fe(II) trafficking protein YggX CLM98_14105 IPR036766 Fe(II) trafficking protein YggX superfamily CLM98_14110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_14110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_14110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_14110 IPR001610 PAC motif CLM98_14110 IPR000014 PAS domain CLM98_14110 IPR000700 PAS-associated, C-terminal CLM98_14110 IPR005467 Histidine kinase domain CLM98_14110 IPR001789 Signal transduction response regulator, receiver domain CLM98_14110 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_14110 IPR035965 PAS domain superfamily CLM98_14110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_14110 IPR011006 CheY-like superfamily CLM98_14125 IPR000305 GIY-YIG endonuclease CLM98_14125 IPR035901 GIY-YIG endonuclease superfamily CLM98_14140 IPR012674 Calycin CLM98_14140 IPR022272 Lipocalin family conserved site CLM98_14140 IPR002446 Lipocalin, bacterial CLM98_14140 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CLM98_14140 IPR022271 Lipocalin, ApoD type CLM98_14155 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_14155 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_14155 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_14155 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CLM98_14155 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_14155 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_14155 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_14165 IPR020826 Transketolase binding site CLM98_14165 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_14165 IPR005474 Transketolase, N-terminal CLM98_14165 IPR033248 Transketolase, C-terminal domain CLM98_14165 IPR005477 Deoxyxylulose-5-phosphate synthase CLM98_14165 IPR029061 Thiamin diphosphate-binding fold CLM98_14165 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLM98_14185 IPR036291 NAD(P)-binding domain superfamily CLM98_14185 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CLM98_14190 IPR001279 Metallo-beta-lactamase CLM98_14190 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CLM98_14190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_14190 IPR017782 Hydroxyacylglutathione hydrolase CLM98_14190 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CLM98_14195 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLM98_14195 IPR016039 Thiolase-like CLM98_14195 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLM98_14195 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_14210 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase CLM98_14210 IPR004629 Glycosyl transferase WecB/TagA/CpsF CLM98_14225 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLM98_14235 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLM98_14235 IPR001296 Glycosyl transferase, family 1 CLM98_14255 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CLM98_14255 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLM98_14255 IPR003362 Bacterial sugar transferase CLM98_14275 IPR000551 MerR-type HTH domain CLM98_14275 IPR009061 Putative DNA-binding domain superfamily CLM98_14280 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLM98_14280 IPR005684 Integration host factor, alpha subunit CLM98_14280 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_14280 IPR000119 Histone-like DNA-binding protein CLM98_14285 IPR002547 tRNA-binding domain CLM98_14285 IPR005146 B3/B4 tRNA-binding domain CLM98_14285 IPR009061 Putative DNA-binding domain superfamily CLM98_14285 IPR005147 tRNA synthetase, B5-domain CLM98_14285 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CLM98_14285 IPR012340 Nucleic acid-binding, OB-fold CLM98_14285 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CLM98_14285 IPR005121 Ferrodoxin-fold anticodon-binding domain CLM98_14285 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLM98_14285 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CLM98_14285 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CLM98_14290 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_14290 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CLM98_14290 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CLM98_14290 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CLM98_14290 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLM98_14290 IPR002319 Phenylalanyl-tRNA synthetase CLM98_14295 IPR005813 Ribosomal protein L20 CLM98_14295 IPR035566 Ribosomal protein L20, C-terminal CLM98_14300 IPR037229 Ribosomal protein L35 superfamily CLM98_14300 IPR018265 Ribosomal protein L35, conserved site CLM98_14300 IPR021137 Ribosomal protein L35 CLM98_14300 IPR001706 Ribosomal protein L35, non-mitochondrial CLM98_14305 IPR019815 Translation initiation factor 3, C-terminal CLM98_14305 IPR019814 Translation initiation factor 3, N-terminal CLM98_14305 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CLM98_14305 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CLM98_14305 IPR019813 Translation initiation factor 3, conserved site CLM98_14305 IPR001288 Translation initiation factor 3 CLM98_14310 IPR033728 Threonine-tRNA ligase catalytic core domain CLM98_14310 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CLM98_14310 IPR002320 Threonine-tRNA ligase, class IIa CLM98_14310 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLM98_14310 IPR012676 TGS-like CLM98_14310 IPR004095 TGS CLM98_14310 IPR012675 Beta-grasp domain superfamily CLM98_14310 IPR036621 Anticodon-binding domain superfamily CLM98_14310 IPR004154 Anticodon-binding CLM98_14310 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_14310 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLM98_14315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_14315 IPR000843 LacI-type HTH domain CLM98_14315 IPR028082 Periplasmic binding protein-like I CLM98_14320 IPR031319 Alpha-amylase, C-terminal domain CLM98_14320 IPR017853 Glycoside hydrolase superfamily CLM98_14320 IPR013780 Glycosyl hydrolase, all-beta CLM98_14320 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_14320 IPR002044 Carbohydrate binding module family 20 CLM98_14320 IPR013784 Carbohydrate-binding-like fold CLM98_14320 IPR013783 Immunoglobulin-like fold CLM98_14325 IPR001927 Sodium:galactoside symporter CLM98_14325 IPR036259 MFS transporter superfamily CLM98_14325 IPR011055 Duplicated hybrid motif CLM98_14325 IPR039672 Lactose permease-like CLM98_14325 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLM98_14325 IPR018043 Sodium:galactoside symporter, conserved site CLM98_14335 IPR013780 Glycosyl hydrolase, all-beta CLM98_14335 IPR029486 Glycosyl-hydrolase 97, N-terminal domain CLM98_14335 IPR019563 Glycosyl-hydrolase 97, catalytic domain CLM98_14335 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain CLM98_14335 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_14335 IPR013785 Aldolase-type TIM barrel CLM98_14335 IPR017853 Glycoside hydrolase superfamily CLM98_14350 IPR017853 Glycoside hydrolase superfamily CLM98_14350 IPR013780 Glycosyl hydrolase, all-beta CLM98_14350 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_14405 IPR004346 CagE, TrbE, VirB component of type IV transporter system CLM98_14405 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CLM98_14405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14410 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CLM98_14420 IPR023346 Lysozyme-like domain superfamily CLM98_14420 IPR008258 Transglycosylase SLT domain 1 CLM98_14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14425 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_14425 IPR001482 Type II/IV secretion system protein CLM98_14425 IPR014155 Type IV secretion system protein VirB11 CLM98_14430 IPR042217 Type IV secretion system, VirB10/TrbI CLM98_14430 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLM98_14450 IPR003688 Type IV secretion system protein TraG/VirD4 CLM98_14450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14470 IPR041471 UvrB, interaction domain CLM98_14470 IPR004807 UvrABC system, subunit B CLM98_14470 IPR001650 Helicase, C-terminal CLM98_14470 IPR036876 UVR domain superfamily CLM98_14470 IPR006935 Helicase/UvrB, N-terminal CLM98_14470 IPR001943 UVR domain CLM98_14470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14470 IPR024759 UvrB, YAD/RRR-motif-containing domain CLM98_14470 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_14545 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_14545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_14545 IPR001091 Restriction/modification DNA-methylase CLM98_14545 IPR002941 DNA methylase N-4/N-6 CLM98_14555 IPR030935 Phage portal protein PBSX family, Proteobacteria CLM98_14555 IPR006430 Phage portal protein PBSX family CLM98_14600 IPR000726 Glycoside hydrolase, family 19, catalytic CLM98_14600 IPR023346 Lysozyme-like domain superfamily CLM98_14665 IPR001082 Fimbrial protein pilin CLM98_14665 IPR012902 Prokaryotic N-terminal methylation site CLM98_14670 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLM98_14670 IPR008707 PilC beta-propeller domain CLM98_14695 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_14695 IPR029016 GAF-like domain superfamily CLM98_14695 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLM98_14695 IPR010559 Signal transduction histidine kinase, internal region CLM98_14695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_14700 IPR021826 Domain of unknown function DUF3412 CLM98_14700 IPR031100 LOG family CLM98_14700 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily CLM98_14700 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal CLM98_14705 IPR039426 Vitamin B12 transporter BtuB-like CLM98_14705 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_14705 IPR013784 Carbohydrate-binding-like fold CLM98_14715 IPR002771 Multiple antibiotic resistance (MarC)-related CLM98_14725 IPR036249 Thioredoxin-like superfamily CLM98_14725 IPR002109 Glutaredoxin CLM98_14725 IPR033658 Glutaredoxin, PICOT-like CLM98_14725 IPR014434 Monothiol glutaredoxin CLM98_14725 IPR004480 Monothiol glutaredoxin-related CLM98_14730 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CLM98_14730 IPR001189 Manganese/iron superoxide dismutase CLM98_14730 IPR019833 Manganese/iron superoxide dismutase, binding site CLM98_14730 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLM98_14730 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLM98_14730 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CLM98_14735 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CLM98_14735 IPR011054 Rudiment single hybrid motif CLM98_14735 IPR011761 ATP-grasp fold CLM98_14735 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLM98_14735 IPR013815 ATP-grasp fold, subdomain 1 CLM98_14735 IPR016185 Pre-ATP-grasp domain superfamily CLM98_14735 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CLM98_14740 IPR000031 PurE domain CLM98_14740 IPR024694 PurE, prokaryotic type CLM98_14740 IPR035893 PurE domain superfamily CLM98_14740 IPR033747 Class I PurE CLM98_14750 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CLM98_14750 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLM98_14750 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CLM98_14750 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLM98_14750 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CLM98_14750 IPR013785 Aldolase-type TIM barrel CLM98_14750 IPR004393 Nicotinate-nucleotide pyrophosphorylase CLM98_14760 IPR003029 S1 domain CLM98_14760 IPR022967 RNA-binding domain, S1 CLM98_14760 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLM98_14760 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLM98_14760 IPR036345 Exoribonuclease, PH domain 2 superfamily CLM98_14760 IPR004087 K Homology domain CLM98_14760 IPR036612 K Homology domain, type 1 superfamily CLM98_14760 IPR012340 Nucleic acid-binding, OB-fold CLM98_14760 IPR012162 Polyribonucleotide nucleotidyltransferase CLM98_14760 IPR027408 PNPase/RNase PH domain superfamily CLM98_14760 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CLM98_14760 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CLM98_14760 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_14760 IPR004088 K Homology domain, type 1 CLM98_14765 IPR005290 Ribosomal protein S15, bacterial-type CLM98_14765 IPR009068 S15/NS1, RNA-binding CLM98_14765 IPR000589 Ribosomal protein S15 CLM98_14770 IPR002501 Pseudouridine synthase II, N-terminal CLM98_14770 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_14770 IPR014780 tRNA pseudouridine synthase II, TruB CLM98_14770 IPR015947 PUA-like superfamily CLM98_14770 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CLM98_14770 IPR032819 tRNA pseudouridylate synthase B, C-terminal CLM98_14775 IPR000238 Ribosome-binding factor A CLM98_14775 IPR015946 K homology domain-like, alpha/beta CLM98_14775 IPR023799 Ribosome-binding factor A domain superfamily CLM98_14775 IPR020053 Ribosome-binding factor A, conserved site CLM98_14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14780 IPR013575 Initiation factor 2 associated domain, bacterial CLM98_14780 IPR006847 Translation initiation factor IF-2, N-terminal CLM98_14780 IPR005225 Small GTP-binding protein domain CLM98_14780 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_14780 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CLM98_14780 IPR023115 Translation initiation factor IF- 2, domain 3 CLM98_14780 IPR015760 Translation initiation factor IF- 2 CLM98_14780 IPR000178 Translation initiation factor aIF-2, bacterial-like CLM98_14780 IPR000795 Transcription factor, GTP-binding domain CLM98_14780 IPR009061 Putative DNA-binding domain superfamily CLM98_14785 IPR010214 Transcription termination factor NusA, C-terminal duplication CLM98_14785 IPR009019 K homology domain superfamily, prokaryotic type CLM98_14785 IPR012340 Nucleic acid-binding, OB-fold CLM98_14785 IPR036555 NusA, N-terminal domain superfamily CLM98_14785 IPR025249 KH domain, NusA-like CLM98_14785 IPR010213 Transcription termination factor NusA CLM98_14785 IPR015946 K homology domain-like, alpha/beta CLM98_14785 IPR030842 Transcription termination/antitermination protein NusA, bacterial CLM98_14785 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CLM98_14785 IPR022967 RNA-binding domain, S1 CLM98_14785 IPR003029 S1 domain CLM98_14785 IPR013735 Transcription factor NusA, N-terminal CLM98_14790 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CLM98_14790 IPR028989 Ribosome maturation factor RimP, N-terminal CLM98_14790 IPR035956 RimP, N-terminal domain superfamily CLM98_14790 IPR003728 Ribosome maturation factor RimP CLM98_14790 IPR028998 Ribosome maturation factor RimP, C-terminal CLM98_14800 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_14800 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CLM98_14805 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_14805 IPR003918 NADH:ubiquinone oxidoreductase CLM98_14805 IPR010227 NADH-quinone oxidoreductase, chain M/4 CLM98_14805 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal CLM98_14810 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CLM98_14810 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLM98_14810 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CLM98_14810 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CLM98_14815 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CLM98_14815 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CLM98_14820 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CLM98_14820 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CLM98_14825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_14825 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_14825 IPR010226 NADH-quinone oxidoreductase, chain I CLM98_14830 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CLM98_14830 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CLM98_14835 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_14835 IPR006656 Molybdopterin oxidoreductase CLM98_14835 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLM98_14835 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_14835 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CLM98_14835 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CLM98_14835 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CLM98_14835 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CLM98_14840 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CLM98_14840 IPR011537 NADH ubiquinone oxidoreductase, F subunit CLM98_14840 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CLM98_14840 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CLM98_14840 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CLM98_14840 IPR019554 Soluble ligand binding domain CLM98_14840 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CLM98_14845 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CLM98_14845 IPR002023 NADH-quinone oxidoreductase subunit E-like CLM98_14845 IPR036249 Thioredoxin-like superfamily CLM98_14845 IPR042128 NuoE domain CLM98_14850 IPR001135 NADH-quinone oxidoreductase, subunit D CLM98_14850 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CLM98_14850 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CLM98_14850 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CLM98_14850 IPR029014 [NiFe]-hydrogenase, large subunit CLM98_14855 IPR010218 NADH dehydrogenase, subunit C CLM98_14855 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CLM98_14855 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CLM98_14855 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CLM98_14860 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CLM98_14860 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CLM98_14865 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CLM98_14865 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CLM98_14865 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CLM98_14880 IPR013785 Aldolase-type TIM barrel CLM98_14880 IPR035990 Triosephosphate isomerase superfamily CLM98_14880 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CLM98_14880 IPR000652 Triosephosphate isomerase CLM98_14880 IPR020861 Triosephosphate isomerase, active site CLM98_14885 IPR036291 NAD(P)-binding domain superfamily CLM98_14885 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_14885 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_14900 IPR005330 MHYT domain CLM98_14900 IPR035919 EAL domain superfamily CLM98_14900 IPR001633 EAL domain CLM98_14900 IPR029787 Nucleotide cyclase CLM98_14900 IPR000160 GGDEF domain CLM98_14915 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_14915 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_14915 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_14915 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CLM98_14915 IPR016066 Alpha-D-phosphohexomutase, conserved site CLM98_14915 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_14915 IPR006352 Phosphoglucosamine mutase, bacterial type CLM98_14915 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_14915 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_14920 IPR041010 Acetyl-coA carboxylase zinc finger domain CLM98_14920 IPR034733 Acetyl-CoA carboxylase CLM98_14920 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CLM98_14920 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CLM98_14920 IPR029045 ClpP/crotonase-like domain superfamily CLM98_14925 IPR002028 Tryptophan synthase, alpha chain CLM98_14925 IPR018204 Tryptophan synthase, alpha chain, active site CLM98_14925 IPR011060 Ribulose-phosphate binding barrel CLM98_14925 IPR013785 Aldolase-type TIM barrel CLM98_14935 IPR006654 Tryptophan synthase, beta chain CLM98_14935 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_14935 IPR023026 Tryptophan synthase beta chain/beta chain-like CLM98_14935 IPR006653 Tryptophan synthase, beta chain, conserved site CLM98_14935 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_14940 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_14940 IPR036390 Winged helix DNA-binding domain superfamily CLM98_14940 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 CLM98_14940 IPR000847 Transcription regulator HTH, LysR CLM98_14940 IPR005119 LysR, substrate-binding CLM98_14945 IPR013785 Aldolase-type TIM barrel CLM98_14945 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CLM98_14945 IPR011060 Ribulose-phosphate binding barrel CLM98_14950 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_14950 IPR001406 Pseudouridine synthase I, TruA CLM98_14950 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CLM98_14950 IPR020095 Pseudouridine synthase I, TruA, C-terminal CLM98_14970 IPR036291 NAD(P)-binding domain superfamily CLM98_14970 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLM98_14970 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CLM98_14970 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CLM98_14970 IPR012080 Aspartate-semialdehyde dehydrogenase CLM98_14975 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_14975 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLM98_14975 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_14975 IPR036291 NAD(P)-binding domain superfamily CLM98_14975 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_14980 IPR020541 Chorismate synthase, conserved site CLM98_14980 IPR000453 Chorismate synthase CLM98_14980 IPR035904 Chorismate synthase AroC superfamily CLM98_14985 IPR007848 Methyltransferase small domain CLM98_14985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_14985 IPR004556 Methyltransferase HemK-like CLM98_14985 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_14985 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CLM98_14990 IPR003782 Copper chaperone SCO1/SenC CLM98_14990 IPR036249 Thioredoxin-like superfamily CLM98_14995 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CLM98_14995 IPR033177 Phosphatidylserine decarboxylase CLM98_14995 IPR003817 Phosphatidylserine decarboxylase-related CLM98_15010 IPR033186 Helicase HerA-like C-terminal CLM98_15010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15015 IPR000086 NUDIX hydrolase domain CLM98_15015 IPR004385 Nucleoside diphosphate pyrophosphatase CLM98_15015 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_15035 IPR006358 Transcription elongation factor GreB CLM98_15035 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CLM98_15035 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLM98_15035 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLM98_15035 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_15035 IPR023459 Transcription elongation factor GreA/GreB family CLM98_15035 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CLM98_15035 IPR028624 Transcription elongation factor GreA/GreB CLM98_15040 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_15040 IPR007197 Radical SAM CLM98_15040 IPR020612 Methylthiotransferase, conserved site CLM98_15040 IPR041582 RimO, TRAM domain CLM98_15040 IPR013848 Methylthiotransferase, N-terminal CLM98_15040 IPR002792 TRAM domain CLM98_15040 IPR006638 Elp3/MiaB/NifB CLM98_15040 IPR005839 Methylthiotransferase CLM98_15040 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CLM98_15040 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLM98_15045 IPR002925 Dienelactone hydrolase CLM98_15045 IPR029058 Alpha/Beta hydrolase fold CLM98_15065 IPR011962 dCTP deaminase CLM98_15065 IPR036157 dUTPase-like superfamily CLM98_15065 IPR033704 dUTPase, trimeric CLM98_15065 IPR029054 dUTPase-like CLM98_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15075 IPR019591 Mrp/NBP35 ATP-binding protein CLM98_15075 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLM98_15075 IPR000808 Mrp, conserved site CLM98_15080 IPR039426 Vitamin B12 transporter BtuB-like CLM98_15080 IPR010917 TonB-dependent receptor, conserved site CLM98_15080 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_15080 IPR010916 TonB box, conserved site CLM98_15080 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_15080 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_15080 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_15080 IPR012910 TonB-dependent receptor, plug domain CLM98_15090 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_15095 IPR042089 Peptidase M13, domain 2 CLM98_15095 IPR008753 Peptidase M13, N-terminal domain CLM98_15095 IPR000718 Peptidase M13 CLM98_15095 IPR018497 Peptidase M13, C-terminal domain CLM98_15095 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_15105 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_15105 IPR008753 Peptidase M13, N-terminal domain CLM98_15105 IPR042089 Peptidase M13, domain 2 CLM98_15105 IPR018497 Peptidase M13, C-terminal domain CLM98_15105 IPR000718 Peptidase M13 CLM98_15120 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CLM98_15120 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLM98_15120 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15125 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_15125 IPR023753 FAD/NAD(P)-binding domain CLM98_15125 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLM98_15125 IPR006322 Glutathione reductase, eukaryote/bacterial CLM98_15125 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_15125 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLM98_15125 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_15130 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_15130 IPR006076 FAD dependent oxidoreductase CLM98_15130 IPR023080 D-amino acid dehydrogenase DadA CLM98_15135 IPR007349 Domain of unknown function DUF418 CLM98_15140 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLM98_15145 IPR038765 Papain-like cysteine peptidase superfamily CLM98_15145 IPR000064 Endopeptidase, NLPC/P60 domain CLM98_15150 IPR038765 Papain-like cysteine peptidase superfamily CLM98_15150 IPR000064 Endopeptidase, NLPC/P60 domain CLM98_15160 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CLM98_15160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_15165 IPR036458 Sodium:dicarboxylate symporter superfamily CLM98_15165 IPR018107 Sodium:dicarboxylate symporter, conserved site CLM98_15165 IPR001991 Sodium:dicarboxylate symporter CLM98_15165 IPR033380 Glutamate-aspartate symport protein GltP/GltT CLM98_15170 IPR018299 Alkaline phosphatase, active site CLM98_15170 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLM98_15170 IPR001952 Alkaline phosphatase CLM98_15180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15180 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CLM98_15180 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CLM98_15180 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLM98_15180 IPR012094 tRNA(Ile)-lysidine synthase CLM98_15180 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CLM98_15185 IPR037004 Exonuclease VII, small subunit superfamily CLM98_15185 IPR003761 Exonuclease VII, small subunit CLM98_15190 IPR033749 Polyprenyl synthetase, conserved site CLM98_15190 IPR000092 Polyprenyl synthetase CLM98_15190 IPR008949 Isoprenoid synthase domain superfamily CLM98_15195 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_15195 IPR034115 Peptidyl-Lys metallopeptidase catalytic domain CLM98_15195 IPR029463 Lysine-specific metallo-endopeptidase CLM98_15205 IPR002510 Metalloprotease TldD/PmbA CLM98_15205 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLM98_15205 IPR036059 Metalloprotease TldD/PmbA superfamily CLM98_15210 IPR023153 PSPTO4464-like domain superfamily CLM98_15210 IPR006839 Ribosome-associated, YjgA CLM98_15215 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLM98_15215 IPR036059 Metalloprotease TldD/PmbA superfamily CLM98_15215 IPR002510 Metalloprotease TldD/PmbA CLM98_15215 IPR025502 TldD CLM98_15225 IPR025263 Domain of unknown function DUF3971 CLM98_15225 IPR032712 AsmA-like, C-terminal CLM98_15225 IPR011836 Conserved hypothetical protein CHP02099 CLM98_15230 IPR003029 S1 domain CLM98_15230 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLM98_15230 IPR022967 RNA-binding domain, S1 CLM98_15230 IPR012340 Nucleic acid-binding, OB-fold CLM98_15230 IPR004659 Ribonuclease E/G CLM98_15235 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CLM98_15235 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_15240 IPR007497 Protein of unknown function DUF541 CLM98_15255 IPR029028 Alpha/beta knot methyltransferases CLM98_15255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_15255 IPR003742 RNA methyltransferase RlmH CLM98_15265 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CLM98_15270 IPR004821 Cytidyltransferase-like domain CLM98_15270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15270 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CLM98_15285 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_15285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15285 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_15285 IPR002302 Leucine-tRNA ligase CLM98_15285 IPR025709 Leucyl-tRNA synthetase, editing domain CLM98_15285 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_15285 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_15285 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_15295 IPR013766 Thioredoxin domain CLM98_15295 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_15295 IPR036249 Thioredoxin-like superfamily CLM98_15320 IPR007211 Protein of unknown function DUF378 CLM98_15325 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLM98_15325 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CLM98_15325 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CLM98_15325 IPR029000 Cyclophilin-like domain superfamily CLM98_15335 IPR036390 Winged helix DNA-binding domain superfamily CLM98_15335 IPR000847 Transcription regulator HTH, LysR CLM98_15335 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15335 IPR005119 LysR, substrate-binding CLM98_15365 IPR039421 Type I protein exporter CLM98_15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15365 IPR017871 ABC transporter, conserved site CLM98_15365 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_15365 IPR003439 ABC transporter-like CLM98_15365 IPR003593 AAA+ ATPase domain CLM98_15365 IPR011527 ABC transporter type 1, transmembrane domain CLM98_15380 IPR001036 Acriflavin resistance protein CLM98_15380 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_15395 IPR003423 Outer membrane efflux protein CLM98_15395 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_15400 IPR011006 CheY-like superfamily CLM98_15400 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_15400 IPR001789 Signal transduction response regulator, receiver domain CLM98_15400 IPR039420 Transcriptional regulatory protein WalR-like CLM98_15400 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_15405 IPR003660 HAMP domain CLM98_15405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_15405 IPR005467 Histidine kinase domain CLM98_15405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_15405 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_15405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15410 IPR006153 Cation/H+ exchanger CLM98_15410 IPR038770 Sodium/solute symporter superfamily CLM98_15415 IPR012338 Beta-lactamase/transpeptidase-like CLM98_15415 IPR001466 Beta-lactamase-related CLM98_15420 IPR010203 Regulator of ribonuclease activity A CLM98_15420 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CLM98_15420 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CLM98_15440 IPR011006 CheY-like superfamily CLM98_15440 IPR000160 GGDEF domain CLM98_15440 IPR029787 Nucleotide cyclase CLM98_15440 IPR001789 Signal transduction response regulator, receiver domain CLM98_15445 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_15445 IPR002942 RNA-binding S4 domain CLM98_15445 IPR036986 RNA-binding S4 domain superfamily CLM98_15445 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_15445 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_15445 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLM98_15445 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_15450 IPR035965 PAS domain superfamily CLM98_15450 IPR029787 Nucleotide cyclase CLM98_15450 IPR000160 GGDEF domain CLM98_15450 IPR035919 EAL domain superfamily CLM98_15450 IPR001633 EAL domain CLM98_15450 IPR013656 PAS fold-4 CLM98_15450 IPR000014 PAS domain CLM98_15455 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLM98_15455 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CLM98_15455 IPR011545 DEAD/DEAH box helicase domain CLM98_15455 IPR001650 Helicase, C-terminal CLM98_15455 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_15455 IPR028618 ATP-dependent RNA helicase DeaD CLM98_15455 IPR014014 RNA helicase, DEAD-box type, Q motif CLM98_15455 IPR034415 CsdA, RNA recognition motif CLM98_15455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15455 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLM98_15505 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLM98_15505 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLM98_15505 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CLM98_15505 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLM98_15505 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CLM98_15505 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CLM98_15505 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15515 IPR023861 Chloride channel, ClcA CLM98_15515 IPR014743 Chloride channel, core CLM98_15515 IPR001807 Chloride channel, voltage gated CLM98_15520 IPR036291 NAD(P)-binding domain superfamily CLM98_15520 IPR011032 GroES-like superfamily CLM98_15520 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_15520 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_15520 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_15520 IPR020843 Polyketide synthase, enoylreductase domain CLM98_15540 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_15540 IPR012910 TonB-dependent receptor, plug domain CLM98_15540 IPR039426 Vitamin B12 transporter BtuB-like CLM98_15540 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_15550 IPR008979 Galactose-binding-like domain superfamily CLM98_15550 IPR002884 P domain CLM98_15550 IPR000209 Peptidase S8/S53 domain CLM98_15550 IPR036852 Peptidase S8/S53 domain superfamily CLM98_15550 IPR015500 Peptidase S8, subtilisin-related CLM98_15550 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_15550 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_15560 IPR000209 Peptidase S8/S53 domain CLM98_15560 IPR002884 P domain CLM98_15560 IPR008979 Galactose-binding-like domain superfamily CLM98_15560 IPR036852 Peptidase S8/S53 domain superfamily CLM98_15560 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_15560 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_15560 IPR015500 Peptidase S8, subtilisin-related CLM98_15570 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_15570 IPR020471 Aldo/keto reductase CLM98_15570 IPR023210 NADP-dependent oxidoreductase domain CLM98_15570 IPR018170 Aldo/keto reductase, conserved site CLM98_15580 IPR020846 Major facilitator superfamily domain CLM98_15580 IPR011701 Major facilitator superfamily CLM98_15580 IPR036259 MFS transporter superfamily CLM98_15585 IPR005119 LysR, substrate-binding CLM98_15585 IPR000847 Transcription regulator HTH, LysR CLM98_15585 IPR036390 Winged helix DNA-binding domain superfamily CLM98_15585 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15595 IPR009594 Transcription regulator HTH, AraC, N-terminal CLM98_15595 IPR018060 DNA binding HTH domain, AraC-type CLM98_15595 IPR009057 Homeobox-like domain superfamily CLM98_15605 IPR011075 Tetracyclin repressor-like, C-terminal domain CLM98_15605 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLM98_15605 IPR001647 DNA-binding HTH domain, TetR-type CLM98_15605 IPR009057 Homeobox-like domain superfamily CLM98_15610 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_15610 IPR003423 Outer membrane efflux protein CLM98_15615 IPR001036 Acriflavin resistance protein CLM98_15615 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_15615 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_15620 IPR006143 RND efflux pump, membrane fusion protein CLM98_15620 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_15630 IPR036390 Winged helix DNA-binding domain superfamily CLM98_15630 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15630 IPR002481 Ferric-uptake regulator CLM98_15635 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CLM98_15635 IPR033910 Glutamyl-tRNA synthetase CLM98_15635 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CLM98_15635 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CLM98_15635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_15635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15635 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_15635 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_15660 IPR010364 Uncharacterised protein family, inner membrane CreD CLM98_15670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_15670 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_15670 IPR003660 HAMP domain CLM98_15670 IPR029151 Periplasmic sensor-like domain superfamily CLM98_15670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_15670 IPR005467 Histidine kinase domain CLM98_15670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_15670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15675 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_15675 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_15675 IPR001789 Signal transduction response regulator, receiver domain CLM98_15675 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_15675 IPR011006 CheY-like superfamily CLM98_15675 IPR039420 Transcriptional regulatory protein WalR-like CLM98_15680 IPR007473 Ribosomal RNA large subunit methyltransferase J CLM98_15680 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_15680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_15690 IPR011545 DEAD/DEAH box helicase domain CLM98_15690 IPR036101 CarD-like/TRCF domain superfamily CLM98_15690 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_15690 IPR001650 Helicase, C-terminal CLM98_15690 IPR004576 Transcription-repair coupling factor CLM98_15690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15690 IPR037235 TRCF-like, C-terminal domain CLM98_15690 IPR005118 Transcription-repair-coupling factor, C-terminal domain CLM98_15690 IPR041471 UvrB, interaction domain CLM98_15690 IPR003711 CarD-like/TRCF domain CLM98_15730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_15730 IPR036061 CheW-like domain superfamily CLM98_15730 IPR002545 CheW-like domain CLM98_15730 IPR015162 CheY binding CLM98_15730 IPR035891 CheY-binding domain of CheA CLM98_15730 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_15730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_15730 IPR005467 Histidine kinase domain CLM98_15730 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_15730 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CLM98_15730 IPR036641 HPT domain superfamily CLM98_15730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_15735 IPR003660 HAMP domain CLM98_15735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_15735 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_15735 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_15735 IPR004090 Chemotaxis methyl-accepting receptor CLM98_15735 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_15740 IPR036061 CheW-like domain superfamily CLM98_15740 IPR002545 CheW-like domain CLM98_15740 IPR039315 Chemotaxis protein CheW CLM98_15745 IPR000700 PAS-associated, C-terminal CLM98_15745 IPR000014 PAS domain CLM98_15745 IPR001610 PAC motif CLM98_15745 IPR029787 Nucleotide cyclase CLM98_15745 IPR000160 GGDEF domain CLM98_15745 IPR035919 EAL domain superfamily CLM98_15745 IPR001633 EAL domain CLM98_15745 IPR012226 Diguanylate cyclase/phosphodiesterase CLM98_15745 IPR035965 PAS domain superfamily CLM98_15750 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_15750 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLM98_15750 IPR000780 MCP methyltransferase, CheR-type CLM98_15750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_15750 IPR026024 Chemotaxis protein methyltransferase CheR CLM98_15750 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLM98_15755 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_15755 IPR035909 Methylesterase CheB, C-terminal CLM98_15755 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CLM98_15755 IPR001789 Signal transduction response regulator, receiver domain CLM98_15755 IPR011006 CheY-like superfamily CLM98_15760 IPR030871 Cardiolipin synthase C CLM98_15760 IPR001736 Phospholipase D/Transphosphatidylase CLM98_15760 IPR025202 Phospholipase D-like domain CLM98_15765 IPR042089 Peptidase M13, domain 2 CLM98_15765 IPR018497 Peptidase M13, C-terminal domain CLM98_15765 IPR000718 Peptidase M13 CLM98_15765 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_15765 IPR008753 Peptidase M13, N-terminal domain CLM98_15775 IPR005952 Phosphoglycerate mutase 1 CLM98_15775 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_15775 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLM98_15775 IPR029033 Histidine phosphatase superfamily CLM98_15780 IPR007581 Endonuclease V CLM98_15790 IPR003829 Pirin, N-terminal domain CLM98_15790 IPR011051 RmlC-like cupin domain superfamily CLM98_15790 IPR014710 RmlC-like jelly roll fold CLM98_15790 IPR012093 Pirin CLM98_15790 IPR008778 Pirin, C-terminal domain CLM98_15805 IPR012093 Pirin CLM98_15805 IPR003829 Pirin, N-terminal domain CLM98_15805 IPR014710 RmlC-like jelly roll fold CLM98_15805 IPR011051 RmlC-like cupin domain superfamily CLM98_15805 IPR008778 Pirin, C-terminal domain CLM98_15810 IPR025299 CstA, C-terminal domain CLM98_15810 IPR003706 CstA, N-terminal domain CLM98_15815 IPR007423 Selenoprotein, putative CLM98_15840 IPR029058 Alpha/Beta hydrolase fold CLM98_15875 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLM98_15875 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLM98_15875 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLM98_15875 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLM98_15880 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_15880 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_15880 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CLM98_15880 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLM98_15880 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLM98_15880 IPR016166 FAD-binding domain, PCMH-type CLM98_15885 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_15885 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_15885 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_15885 IPR012675 Beta-grasp domain superfamily CLM98_15885 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_15885 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_15885 IPR036884 [2Fe-2S]-binding domain superfamily CLM98_15885 IPR002888 [2Fe-2S]-binding CLM98_15890 IPR020807 Polyketide synthase, dehydratase domain CLM98_15890 IPR036736 ACP-like superfamily CLM98_15890 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_15890 IPR014043 Acyl transferase CLM98_15890 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_15890 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_15890 IPR036347 Erythronolide synthase, docking domain superfamily CLM98_15890 IPR015357 Erythronolide synthase, docking CLM98_15890 IPR001227 Acyl transferase domain superfamily CLM98_15890 IPR011032 GroES-like superfamily CLM98_15890 IPR018201 Beta-ketoacyl synthase, active site CLM98_15890 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_15890 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_15890 IPR032821 Ketoacyl-synthetase, C-terminal extension CLM98_15890 IPR036291 NAD(P)-binding domain superfamily CLM98_15890 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_15890 IPR042104 Polyketide synthase, dehydratase domain superfamily CLM98_15890 IPR020843 Polyketide synthase, enoylreductase domain CLM98_15890 IPR016039 Thiolase-like CLM98_15890 IPR009081 Phosphopantetheine binding ACP domain CLM98_15890 IPR013968 Polyketide synthase, ketoreductase domain CLM98_15890 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_15890 IPR015083 Polyketide synthase, docking domain CLM98_15890 IPR006162 Phosphopantetheine attachment site CLM98_15895 IPR029016 GAF-like domain superfamily CLM98_15895 IPR003018 GAF domain CLM98_15895 IPR000160 GGDEF domain CLM98_15895 IPR035919 EAL domain superfamily CLM98_15895 IPR029787 Nucleotide cyclase CLM98_15895 IPR001633 EAL domain CLM98_15895 IPR013515 Phytochrome, central region CLM98_15895 IPR001294 Phytochrome CLM98_15895 IPR016132 Phytochrome chromophore attachment domain CLM98_15910 IPR003356 DNA methylase, adenine-specific CLM98_15910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_15910 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_15910 IPR004546 Restriction endonuclease, type I, HsdM CLM98_15910 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLM98_15910 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CLM98_15935 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_15935 IPR011344 Single-stranded DNA-binding protein CLM98_15935 IPR012340 Nucleic acid-binding, OB-fold CLM98_15940 IPR033749 Polyprenyl synthetase, conserved site CLM98_15940 IPR008949 Isoprenoid synthase domain superfamily CLM98_15940 IPR000092 Polyprenyl synthetase CLM98_15955 IPR018109 Folylpolyglutamate synthetase, conserved site CLM98_15955 IPR036565 Mur-like, catalytic domain superfamily CLM98_15955 IPR004101 Mur ligase, C-terminal CLM98_15955 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_15955 IPR013221 Mur ligase, central CLM98_15955 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CLM98_15970 IPR036393 Acetylglutamate kinase-like superfamily CLM98_15970 IPR002912 ACT domain CLM98_15970 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain CLM98_15970 IPR001341 Aspartate kinase CLM98_15970 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_15970 IPR005260 Aspartate kinase, monofunctional class CLM98_15970 IPR018042 Aspartate kinase, conserved site CLM98_15975 IPR003719 Phenazine biosynthesis PhzF protein CLM98_15980 IPR003719 Phenazine biosynthesis PhzF protein CLM98_15990 IPR036102 OsmC/Ohr superfamily CLM98_15990 IPR003718 OsmC/Ohr family CLM98_15990 IPR015946 K homology domain-like, alpha/beta CLM98_15990 IPR019904 Peroxiredoxin OsmC CLM98_15995 IPR006130 Aspartate/ornithine carbamoyltransferase CLM98_15995 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLM98_15995 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLM98_15995 IPR002082 Aspartate carbamoyltransferase CLM98_15995 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CLM98_16000 IPR005227 Putative pre-16S rRNA nuclease CLM98_16000 IPR012337 Ribonuclease H-like superfamily CLM98_16000 IPR006641 YqgF/RNase H-like domain CLM98_16000 IPR037027 YqgF/RNase H-like domain superfamily CLM98_16005 IPR003774 Protein of unknown function UPF0301 CLM98_16015 IPR011257 DNA glycosylase CLM98_16015 IPR029062 Class I glutamine amidotransferase-like CLM98_16015 IPR017926 Glutamine amidotransferase CLM98_16015 IPR025777 GMP synthetase ATP pyrophosphatase domain CLM98_16015 IPR016181 Acyl-CoA N-acyltransferase CLM98_16015 IPR000182 GNAT domain CLM98_16015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_16015 IPR001674 GMP synthase, C-terminal CLM98_16015 IPR005019 Methyladenine glycosylase CLM98_16025 IPR011050 Pectin lyase fold/virulence factor CLM98_16025 IPR012334 Pectin lyase fold CLM98_16025 IPR004898 Pectate lyase PlyH/PlyE-like CLM98_16030 IPR003593 AAA+ ATPase domain CLM98_16030 IPR001482 Type II/IV secretion system protein CLM98_16030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16030 IPR006321 Pilus retraction protein PilT CLM98_16040 IPR001608 Alanine racemase, N-terminal CLM98_16040 IPR029066 PLP-binding barrel CLM98_16040 IPR011078 Pyridoxal phosphate homeostasis protein CLM98_16045 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_16045 IPR036291 NAD(P)-binding domain superfamily CLM98_16045 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLM98_16045 IPR000304 Pyrroline-5-carboxylate reductase CLM98_16045 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CLM98_16055 IPR016047 Peptidase M23 CLM98_16055 IPR011055 Duplicated hybrid motif CLM98_16075 IPR006286 Deglycase PfpI CLM98_16075 IPR002818 DJ-1/PfpI CLM98_16075 IPR029062 Class I glutamine amidotransferase-like CLM98_16085 IPR000944 Transcription regulator Rrf2-type CLM98_16085 IPR030489 Transcription regulator Rrf2-type, conserved site CLM98_16085 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_16085 IPR036390 Winged helix DNA-binding domain superfamily CLM98_16090 IPR000825 SUF system FeS cluster assembly, SufBD CLM98_16090 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CLM98_16090 IPR010231 SUF system FeS cluster assembly, SufB CLM98_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16095 IPR010230 FeS cluster assembly SUF system, ATPase SufC CLM98_16095 IPR003439 ABC transporter-like CLM98_16095 IPR003593 AAA+ ATPase domain CLM98_16095 IPR017871 ABC transporter, conserved site CLM98_16100 IPR000825 SUF system FeS cluster assembly, SufBD CLM98_16100 IPR011542 SUF system FeS cluster assembly, SufD CLM98_16100 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CLM98_16105 IPR000192 Aminotransferase class V domain CLM98_16105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_16105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_16105 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLM98_16105 IPR010970 Cysteine desulfurase, SufS CLM98_16105 IPR016454 Cysteine desulfurase CLM98_16105 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16115 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLM98_16115 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_16120 IPR012910 TonB-dependent receptor, plug domain CLM98_16120 IPR039423 TonB-dependent receptor-like CLM98_16120 IPR010916 TonB box, conserved site CLM98_16120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_16120 IPR010105 TonB-dependent siderophore receptor CLM98_16120 IPR030148 Catecholate siderophore receptor Fiu CLM98_16120 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_16120 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_16125 IPR041097 PKHD-type hydroxylase C-terminal domain CLM98_16125 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_16125 IPR006620 Prolyl 4-hydroxylase, alpha subunit CLM98_16125 IPR023550 PKHD-type hydroxylase CLM98_16150 IPR042159 Flavin-trafficking protein ApbE CLM98_16150 IPR003374 ApbE-like superfamily CLM98_16150 IPR024932 Flavin transferase ApbE CLM98_16155 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CLM98_16155 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CLM98_16155 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CLM98_16155 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_16155 IPR001094 Flavodoxin-like CLM98_16155 IPR008254 Flavodoxin/nitric oxide synthase CLM98_16155 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_16155 IPR029039 Flavoprotein-like superfamily CLM98_16155 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_16155 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CLM98_16155 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_16155 IPR017938 Riboflavin synthase-like beta-barrel CLM98_16170 IPR010994 RuvA domain 2-like CLM98_16170 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLM98_16175 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLM98_16175 IPR036264 Bacterial exopeptidase dimerisation domain CLM98_16175 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CLM98_16175 IPR011650 Peptidase M20, dimerisation domain CLM98_16175 IPR002933 Peptidase M20 CLM98_16185 IPR011009 Protein kinase-like domain superfamily CLM98_16185 IPR002575 Aminoglycoside phosphotransferase CLM98_16190 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_16190 IPR005835 Nucleotidyl transferase domain CLM98_16195 IPR013317 Chromosomal replication initiator protein DnaA CLM98_16195 IPR020591 Chromosomal replication control, initiator DnaA-like CLM98_16195 IPR017788 DnaA regulatory inactivator Hda CLM98_16195 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CLM98_16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16200 IPR002549 Transmembrane protein TqsA-like CLM98_16210 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CLM98_16210 IPR036921 PurM-like, N-terminal domain superfamily CLM98_16210 IPR016188 PurM-like, N-terminal domain CLM98_16210 IPR010918 PurM-like, C-terminal domain CLM98_16210 IPR036676 PurM-like, C-terminal domain superfamily CLM98_16220 IPR004607 Phosphoribosylglycinamide formyltransferase CLM98_16220 IPR002376 Formyl transferase, N-terminal CLM98_16220 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLM98_16220 IPR036477 Formyl transferase, N-terminal domain superfamily CLM98_16240 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CLM98_16240 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLM98_16240 IPR036968 Enolpyruvate transferase domain superfamily CLM98_16240 IPR001986 Enolpyruvate transferase domain CLM98_16245 IPR036065 BolA-like superfamily CLM98_16245 IPR002634 BolA protein CLM98_16250 IPR000644 CBS domain CLM98_16250 IPR035474 KpsF-like, SIS domain CLM98_16250 IPR001347 Sugar isomerase (SIS) CLM98_16250 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CLM98_16255 IPR023214 HAD superfamily CLM98_16255 IPR010023 KdsC family CLM98_16255 IPR036412 HAD-like superfamily CLM98_16265 IPR014340 Lipopolysaccharide export system protein LptA CLM98_16265 IPR005653 Organic solvent tolerance-like, N-terminal CLM98_16270 IPR003593 AAA+ ATPase domain CLM98_16270 IPR003439 ABC transporter-like CLM98_16270 IPR017871 ABC transporter, conserved site CLM98_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16270 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CLM98_16275 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CLM98_16275 IPR007046 RNA polymerase sigma factor 54, core-binding domain CLM98_16275 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLM98_16275 IPR000394 RNA polymerase sigma factor 54 CLM98_16280 IPR003489 Ribosome hibernation promoting factor/RaiA CLM98_16280 IPR036567 Ribosome hibernation promotion factor-like CLM98_16285 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CLM98_16285 IPR016152 Phosphotransferase/anion transporter CLM98_16285 IPR002178 PTS EIIA type-2 domain CLM98_16290 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLM98_16290 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CLM98_16290 IPR011104 HPr kinase/phosphorylase, C-terminal CLM98_16290 IPR003755 HPr(Ser) kinase/phosphorylase CLM98_16295 IPR005337 RapZ-like family CLM98_16295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16305 IPR000032 Phosphocarrier protein HPr-like CLM98_16305 IPR035895 HPr-like superfamily CLM98_16305 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLM98_16305 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLM98_16310 IPR036618 PtsI, HPr-binding domain superfamily CLM98_16310 IPR008731 Phosphotransferase system, enzyme I N-terminal CLM98_16310 IPR018274 PEP-utilising enzyme, active site CLM98_16310 IPR000121 PEP-utilising enzyme, C-terminal CLM98_16310 IPR040442 Pyruvate kinase-like domain superfamily CLM98_16310 IPR008279 PEP-utilising enzyme, mobile domain CLM98_16310 IPR024692 Phosphotransferase system, enzyme I CLM98_16310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_16310 IPR006318 Phosphotransferase system, enzyme I-like CLM98_16310 IPR036637 Phosphohistidine domain superfamily CLM98_16310 IPR023151 PEP-utilising enzyme, conserved site CLM98_16320 IPR006668 Magnesium transporter, MgtE intracellular domain CLM98_16320 IPR000644 CBS domain CLM98_16320 IPR038076 MgtE, N-terminal domain superfamily CLM98_16320 IPR006669 Magnesium transporter MgtE CLM98_16320 IPR038048 Magnesium transporter MgtE, transmembrane domain CLM98_16320 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLM98_16320 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CLM98_16325 IPR029058 Alpha/Beta hydrolase fold CLM98_16325 IPR000801 Putative esterase CLM98_16335 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CLM98_16340 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CLM98_16350 IPR004841 Amino acid permease/ SLC12A domain CLM98_16350 IPR004840 Amino acid permease, conserved site CLM98_16360 IPR012334 Pectin lyase fold CLM98_16360 IPR002022 Pectate lyase CLM98_16360 IPR011050 Pectin lyase fold/virulence factor CLM98_16370 IPR005945 Proline-specific peptidase CLM98_16370 IPR002410 Peptidase S33 CLM98_16370 IPR029058 Alpha/Beta hydrolase fold CLM98_16370 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16380 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_16380 IPR000792 Transcription regulator LuxR, C-terminal CLM98_16380 IPR011006 CheY-like superfamily CLM98_16385 IPR004841 Amino acid permease/ SLC12A domain CLM98_16405 IPR009003 Peptidase S1, PA clan CLM98_16420 IPR013471 Ribonuclease Z/BN CLM98_16420 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_16420 IPR001279 Metallo-beta-lactamase CLM98_16425 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_16425 IPR006905 Flavin-dependent halogenase CLM98_16425 IPR033856 Flavin-dependent tryptophan halogenase CLM98_16455 IPR010211 Redox-sensitive transcriptional activator SoxR CLM98_16455 IPR009061 Putative DNA-binding domain superfamily CLM98_16455 IPR015358 Transcription regulator MerR, DNA binding CLM98_16455 IPR000551 MerR-type HTH domain CLM98_16460 IPR004638 Drug resistance transporter EmrB-like CLM98_16460 IPR020846 Major facilitator superfamily domain CLM98_16460 IPR036259 MFS transporter superfamily CLM98_16460 IPR011701 Major facilitator superfamily CLM98_16470 IPR016185 Pre-ATP-grasp domain superfamily CLM98_16470 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CLM98_16495 IPR007157 PspA/IM30 CLM98_16505 IPR012349 FMN-binding split barrel CLM98_16505 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CLM98_16505 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CLM98_16505 IPR000659 Pyridoxamine 5'-phosphate oxidase CLM98_16505 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CLM98_16510 IPR023000 Shikimate kinase, conserved site CLM98_16510 IPR000623 Shikimate kinase/Threonine synthase-like 1 CLM98_16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16510 IPR031322 Shikimate kinase/gluconokinase CLM98_16515 IPR016037 3-dehydroquinate synthase AroB CLM98_16515 IPR030963 3-dehydroquinate synthase family CLM98_16515 IPR030960 3-dehydroquinate synthase domain CLM98_16525 IPR006361 Uroporphyrinogen decarboxylase HemE CLM98_16525 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLM98_16525 IPR038071 UROD/MetE-like superfamily CLM98_16595 IPR003593 AAA+ ATPase domain CLM98_16595 IPR029016 GAF-like domain superfamily CLM98_16595 IPR009057 Homeobox-like domain superfamily CLM98_16595 IPR025944 Sigma-54 interaction domain, conserved site CLM98_16595 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_16595 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_16595 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_16595 IPR010113 Nif-specific regulatory protein CLM98_16595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16595 IPR003018 GAF domain CLM98_16595 IPR002197 DNA binding HTH domain, Fis-type CLM98_16600 IPR023721 Multidrug resistance protein MdtD CLM98_16600 IPR004638 Drug resistance transporter EmrB-like CLM98_16600 IPR020846 Major facilitator superfamily domain CLM98_16600 IPR011701 Major facilitator superfamily CLM98_16600 IPR036259 MFS transporter superfamily CLM98_16605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_16605 IPR005467 Histidine kinase domain CLM98_16605 IPR001789 Signal transduction response regulator, receiver domain CLM98_16605 IPR036641 HPT domain superfamily CLM98_16605 IPR011006 CheY-like superfamily CLM98_16605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16605 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_16605 IPR033414 Periplasmic sensor domain CLM98_16605 IPR003660 HAMP domain CLM98_16605 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_16605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_16605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_16610 IPR011006 CheY-like superfamily CLM98_16610 IPR036641 HPT domain superfamily CLM98_16610 IPR003660 HAMP domain CLM98_16610 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_16610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_16610 IPR005467 Histidine kinase domain CLM98_16610 IPR033414 Periplasmic sensor domain CLM98_16610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_16610 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_16610 IPR001789 Signal transduction response regulator, receiver domain CLM98_16610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_16620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_16620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_16620 IPR011006 CheY-like superfamily CLM98_16620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_16620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_16620 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_16620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16620 IPR036641 HPT domain superfamily CLM98_16620 IPR001789 Signal transduction response regulator, receiver domain CLM98_16620 IPR005467 Histidine kinase domain CLM98_16625 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_16625 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CLM98_16625 IPR023480 Uncharacterised protein family UPF0312/YceI CLM98_16645 IPR029009 Allosteric substrate binding domain superfamily CLM98_16645 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CLM98_16645 IPR005130 Serine dehydratase-like, alpha subunit CLM98_16645 IPR005131 Serine dehydratase beta chain CLM98_16650 IPR029058 Alpha/Beta hydrolase fold CLM98_16650 IPR000639 Epoxide hydrolase-like CLM98_16650 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16650 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD CLM98_16660 IPR001342 Homoserine dehydrogenase, catalytic CLM98_16660 IPR036393 Acetylglutamate kinase-like superfamily CLM98_16660 IPR036291 NAD(P)-binding domain superfamily CLM98_16660 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_16660 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLM98_16660 IPR001341 Aspartate kinase CLM98_16660 IPR018042 Aspartate kinase, conserved site CLM98_16660 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CLM98_16660 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CLM98_16660 IPR019811 Homoserine dehydrogenase, conserved site CLM98_16665 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLM98_16665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_16665 IPR011821 O-succinylhomoserine (thiol)-lyase CLM98_16665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_16670 IPR008220 Homoserine/serine acetyltransferase MetX-like CLM98_16670 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16670 IPR029058 Alpha/Beta hydrolase fold CLM98_16675 IPR016047 Peptidase M23 CLM98_16675 IPR013731 Opacity-associated protein A, N-terminal CLM98_16675 IPR018392 LysM domain CLM98_16675 IPR011055 Duplicated hybrid motif CLM98_16680 IPR041732 Peptide chain release factor 3, GTP-binding domain CLM98_16680 IPR000795 Transcription factor, GTP-binding domain CLM98_16680 IPR005225 Small GTP-binding protein domain CLM98_16680 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_16680 IPR031157 Tr-type G domain, conserved site CLM98_16680 IPR035647 EF-G domain III/V-like CLM98_16680 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CLM98_16680 IPR032090 Peptide chain release factor 3, C-terminal CLM98_16680 IPR004548 Peptide chain release factor 3 CLM98_16680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16685 IPR004254 AdipoR/Haemolysin-III-related CLM98_16685 IPR005744 Hly-III CLM98_16690 IPR007844 AsmA CLM98_16695 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLM98_16695 IPR001093 IMP dehydrogenase/GMP reductase CLM98_16695 IPR000644 CBS domain CLM98_16695 IPR005990 Inosine-5'-monophosphate dehydrogenase CLM98_16695 IPR013785 Aldolase-type TIM barrel CLM98_16700 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_16700 IPR001173 Glycosyltransferase 2-like CLM98_16705 IPR036950 Penicillin binding protein transglycosylase domain CLM98_16705 IPR001264 Glycosyl transferase, family 51 CLM98_16705 IPR023346 Lysozyme-like domain superfamily CLM98_16705 IPR011812 Biosynthetic peptidoglycan transglycosylase CLM98_16710 IPR016153 Heat shock protein Hsp33, N-terminal CLM98_16710 IPR016154 Heat shock protein Hsp33, C-terminal CLM98_16710 IPR000397 Heat shock protein Hsp33 CLM98_16710 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CLM98_16720 IPR010917 TonB-dependent receptor, conserved site CLM98_16720 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_16720 IPR012910 TonB-dependent receptor, plug domain CLM98_16720 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_16720 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_16720 IPR039426 Vitamin B12 transporter BtuB-like CLM98_16720 IPR010916 TonB box, conserved site CLM98_16730 IPR001647 DNA-binding HTH domain, TetR-type CLM98_16730 IPR009057 Homeobox-like domain superfamily CLM98_16730 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_16735 IPR029058 Alpha/Beta hydrolase fold CLM98_16735 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16735 IPR000639 Epoxide hydrolase-like CLM98_16740 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CLM98_16740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLM98_16740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLM98_16740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_16740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_16740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLM98_16765 IPR017453 Glycine cleavage system H-protein, subgroup CLM98_16765 IPR011053 Single hybrid motif CLM98_16765 IPR000089 Biotin/lipoyl attachment CLM98_16765 IPR002930 Glycine cleavage system H-protein CLM98_16765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_16765 IPR033753 Glycine cleavage system H-protein/Simiate CLM98_16770 IPR022903 Glycine cleavage system T protein, bacteria CLM98_16770 IPR006222 Aminomethyltransferase, folate-binding domain CLM98_16770 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLM98_16770 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CLM98_16770 IPR028896 Aminomethyltransferase-like CLM98_16770 IPR006223 Glycine cleavage system T protein CLM98_16770 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CLM98_16785 IPR003844 Uncharacterised protein family UPF0060 CLM98_16790 IPR011551 NTP pyrophosphohydrolase MazG CLM98_16790 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLM98_16795 IPR000760 Inositol monophosphatase-like CLM98_16795 IPR020583 Inositol monophosphatase, metal-binding site CLM98_16795 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CLM98_16795 IPR020550 Inositol monophosphatase, conserved site CLM98_16800 IPR015797 NUDIX hydrolase-like domain superfamily CLM98_16800 IPR020084 NUDIX hydrolase, conserved site CLM98_16800 IPR000086 NUDIX hydrolase domain CLM98_16805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_16805 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CLM98_16805 IPR005814 Aminotransferase class-III CLM98_16805 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_16810 IPR029028 Alpha/beta knot methyltransferases CLM98_16810 IPR006700 Ribosomal RNA small subunit methyltransferase E CLM98_16810 IPR015947 PUA-like superfamily CLM98_16810 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_16815 IPR003836 Glucokinase CLM98_16830 IPR041704 CFLE, GH18 catalytic domain CLM98_16830 IPR036779 LysM domain superfamily CLM98_16830 IPR018392 LysM domain CLM98_16830 IPR011583 Chitinase II CLM98_16830 IPR017853 Glycoside hydrolase superfamily CLM98_16830 IPR001223 Glycoside hydrolase family 18, catalytic domain CLM98_16830 IPR029070 Chitinase insertion domain superfamily CLM98_16845 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CLM98_16845 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_16845 IPR026891 Fibronectin type III-like domain CLM98_16845 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_16845 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_16845 IPR017853 Glycoside hydrolase superfamily CLM98_16845 IPR013783 Immunoglobulin-like fold CLM98_16845 IPR037524 PA14/GLEYA domain CLM98_16845 IPR011658 PA14 domain CLM98_16855 IPR001944 Glycoside hydrolase, family 35 CLM98_16855 IPR008979 Galactose-binding-like domain superfamily CLM98_16855 IPR017853 Glycoside hydrolase superfamily CLM98_16855 IPR019801 Glycoside hydrolase, family 35, conserved site CLM98_16855 IPR031330 Glycoside hydrolase 35, catalytic domain CLM98_16855 IPR026283 Beta-galactosidase 1-like CLM98_16860 IPR002293 Amino acid/polyamine transporter I CLM98_16870 IPR019802 Glycoside hydrolase, family 4, conserved site CLM98_16870 IPR001088 Glycoside hydrolase, family 4 CLM98_16870 IPR036291 NAD(P)-binding domain superfamily CLM98_16870 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLM98_16870 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLM98_16880 IPR012939 Glycosyl hydrolase family 92 CLM98_16880 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_16880 IPR005887 Alpha-1,2-mannosidase, putative CLM98_16880 IPR008928 Six-hairpin glycosidase superfamily CLM98_16880 IPR041371 Glycosyl hydrolase family 92 N-terminal domain CLM98_16885 IPR026283 Beta-galactosidase 1-like CLM98_16885 IPR031330 Glycoside hydrolase 35, catalytic domain CLM98_16885 IPR019801 Glycoside hydrolase, family 35, conserved site CLM98_16885 IPR017853 Glycoside hydrolase superfamily CLM98_16885 IPR001944 Glycoside hydrolase, family 35 CLM98_16885 IPR008979 Galactose-binding-like domain superfamily CLM98_16920 IPR036822 Copper homeostasis (CutC) domain superfamily CLM98_16920 IPR023648 Copper homeostasis CutC domain CLM98_16920 IPR005627 Copper homeostasis protein CutC CLM98_16925 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_16925 IPR000246 Peptidase T2, asparaginase 2 CLM98_16925 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_16945 IPR016181 Acyl-CoA N-acyltransferase CLM98_16945 IPR000182 GNAT domain CLM98_16960 IPR011006 CheY-like superfamily CLM98_16960 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_16960 IPR002545 CheW-like domain CLM98_16960 IPR001789 Signal transduction response regulator, receiver domain CLM98_16960 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_16960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16960 IPR036641 HPT domain superfamily CLM98_16960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_16960 IPR005467 Histidine kinase domain CLM98_16960 IPR036061 CheW-like domain superfamily CLM98_16965 IPR003660 HAMP domain CLM98_16965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_16965 IPR029095 NarX-like, N-terminal CLM98_16965 IPR004090 Chemotaxis methyl-accepting receptor CLM98_16975 IPR001789 Signal transduction response regulator, receiver domain CLM98_16975 IPR011006 CheY-like superfamily CLM98_16980 IPR011006 CheY-like superfamily CLM98_16980 IPR001789 Signal transduction response regulator, receiver domain CLM98_16985 IPR011761 ATP-grasp fold CLM98_16985 IPR013815 ATP-grasp fold, subdomain 1 CLM98_16985 IPR006284 Glutathione synthetase, prokaryotic CLM98_16985 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CLM98_16985 IPR016185 Pre-ATP-grasp domain superfamily CLM98_16985 IPR004215 Prokaryotic glutathione synthetase, N-terminal CLM98_16995 IPR005502 ADP-ribosylation/Crystallin J1 CLM98_16995 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CLM98_17000 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CLM98_17000 IPR000905 Gcp-like domain CLM98_17005 IPR006555 ATP-dependent helicase, C-terminal CLM98_17005 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CLM98_17005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17005 IPR006935 Helicase/UvrB, N-terminal CLM98_17005 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_17015 IPR001460 Penicillin-binding protein, transpeptidase CLM98_17015 IPR028166 Bifunctional transglycosylase second domain CLM98_17015 IPR036950 Penicillin binding protein transglycosylase domain CLM98_17015 IPR012338 Beta-lactamase/transpeptidase-like CLM98_17015 IPR023346 Lysozyme-like domain superfamily CLM98_17015 IPR001264 Glycosyl transferase, family 51 CLM98_17015 IPR011813 Penicillin-binding protein 1B CLM98_17020 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_17020 IPR001173 Glycosyltransferase 2-like CLM98_17040 IPR012675 Beta-grasp domain superfamily CLM98_17040 IPR033655 RelA, TGS domain CLM98_17040 IPR012676 TGS-like CLM98_17040 IPR004095 TGS CLM98_17040 IPR007685 RelA/SpoT CLM98_17040 IPR004811 RelA/SpoT family CLM98_17040 IPR002912 ACT domain CLM98_17040 IPR003607 HD/PDEase domain CLM98_17045 IPR011725 Coenzyme PQQ biosynthesis protein A CLM98_17050 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_17050 IPR001279 Metallo-beta-lactamase CLM98_17050 IPR011842 Coenzyme PQQ biosynthesis protein B CLM98_17055 IPR016084 Haem oxygenase-like, multi-helical CLM98_17055 IPR011845 Coenzyme PQQ biosynthesis protein C CLM98_17055 IPR004305 Thiaminase-2/PQQC CLM98_17055 IPR039068 Pyrroloquinoline-quinone synthase-like CLM98_17060 IPR041881 Coenzyme PQQ synthesis protein D superfamily CLM98_17060 IPR022479 Coenzyme PQQ synthesis D, bacteria CLM98_17060 IPR008792 Coenzyme PQQ synthesis protein D CLM98_17065 IPR023885 4Fe4S-binding SPASM domain CLM98_17065 IPR007197 Radical SAM CLM98_17065 IPR017200 Coenzyme PQQ synthesis protein E CLM98_17065 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CLM98_17065 IPR013785 Aldolase-type TIM barrel CLM98_17080 IPR003836 Glucokinase CLM98_17095 IPR003593 AAA+ ATPase domain CLM98_17095 IPR011709 Domain of unknown function DUF1605 CLM98_17095 IPR011545 DEAD/DEAH box helicase domain CLM98_17095 IPR007502 Helicase-associated domain CLM98_17095 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_17095 IPR010222 RNA helicase HrpA CLM98_17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17095 IPR024590 RNA helicase HrpA, C-terminal CLM98_17095 IPR001650 Helicase, C-terminal CLM98_17100 IPR008331 Ferritin/DPS protein domain CLM98_17100 IPR002177 DNA-binding protein Dps CLM98_17100 IPR012347 Ferritin-like CLM98_17100 IPR009078 Ferritin-like superfamily CLM98_17100 IPR023188 DNA-binding protein Dps, conserved site CLM98_17110 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_17110 IPR001650 Helicase, C-terminal CLM98_17110 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLM98_17110 IPR002121 HRDC domain CLM98_17110 IPR018982 RQC domain CLM98_17110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17110 IPR010997 HRDC-like superfamily CLM98_17110 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CLM98_17110 IPR004589 DNA helicase, ATP-dependent, RecQ type CLM98_17110 IPR011545 DEAD/DEAH box helicase domain CLM98_17110 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_17145 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_17145 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_17145 IPR004090 Chemotaxis methyl-accepting receptor CLM98_17145 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_17145 IPR003660 HAMP domain CLM98_17145 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_17165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17165 IPR001610 PAC motif CLM98_17165 IPR000014 PAS domain CLM98_17165 IPR000700 PAS-associated, C-terminal CLM98_17165 IPR035965 PAS domain superfamily CLM98_17165 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17165 IPR011102 Signal transduction histidine kinase, HWE region CLM98_17170 IPR018317 Queuosine biosynthesis protein QueC CLM98_17170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_17180 IPR024924 7-carboxy-7-deazaguanine synthase-like CLM98_17180 IPR013785 Aldolase-type TIM barrel CLM98_17180 IPR007197 Radical SAM CLM98_17190 IPR006664 Outer membrane protein, bacterial CLM98_17190 IPR039001 Peptidoglycan-associated lipoprotein CLM98_17190 IPR036737 OmpA-like domain superfamily CLM98_17190 IPR006690 Outer membrane protein, OmpA-like, conserved site CLM98_17190 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CLM98_17190 IPR006665 OmpA-like domain CLM98_17195 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_17195 IPR011659 WD40-like Beta Propeller CLM98_17195 IPR014167 Tol-Pal system protein TolB CLM98_17195 IPR007195 TolB, N-terminal CLM98_17195 IPR036752 TolB, N-terminal domain superfamily CLM98_17205 IPR014168 Tol-Pal system protein TolR CLM98_17205 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_17210 IPR014163 Tol-Pal system, TolQ CLM98_17210 IPR002898 MotA/TolQ/ExbB proton channel CLM98_17215 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CLM98_17215 IPR029069 HotDog domain superfamily CLM98_17215 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CLM98_17215 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CLM98_17215 IPR006683 Thioesterase domain CLM98_17220 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_17220 IPR008823 RuvB C-terminal winged helix domain CLM98_17220 IPR003593 AAA+ ATPase domain CLM98_17220 IPR004605 DNA helicase, Holliday junction RuvB-type CLM98_17220 IPR036390 Winged helix DNA-binding domain superfamily CLM98_17220 IPR008824 RuvB-like P-loop domain CLM98_17220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17220 IPR041445 RuvB, AAA lid domain CLM98_17230 IPR023051 Potassium uptake protein, low affinity, Kup CLM98_17230 IPR003855 Potassium transporter CLM98_17235 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CLM98_17235 IPR036267 RuvA, C-terminal domain superfamily CLM98_17235 IPR010994 RuvA domain 2-like CLM98_17235 IPR000085 Bacterial DNA recombination protein RuvA CLM98_17235 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CLM98_17235 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLM98_17235 IPR012340 Nucleic acid-binding, OB-fold CLM98_17240 IPR036397 Ribonuclease H superfamily CLM98_17240 IPR002176 Crossover junction endodeoxyribonuclease RuvC CLM98_17240 IPR012337 Ribonuclease H-like superfamily CLM98_17240 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CLM98_17245 IPR017856 Integrase-like, N-terminal CLM98_17245 IPR002876 Transcriptional regulator TACO1-like CLM98_17245 IPR026564 Transcriptional regulator TACO1-like, domain 3 CLM98_17245 IPR029072 YebC-like CLM98_17260 IPR004115 GAD-like domain superfamily CLM98_17260 IPR029351 GAD domain CLM98_17260 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_17260 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_17260 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_17260 IPR012340 Nucleic acid-binding, OB-fold CLM98_17260 IPR004524 Aspartate-tRNA ligase, type 1 CLM98_17260 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLM98_17275 IPR020846 Major facilitator superfamily domain CLM98_17275 IPR036259 MFS transporter superfamily CLM98_17275 IPR011701 Major facilitator superfamily CLM98_17285 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLM98_17285 IPR007312 Phosphoesterase CLM98_17285 IPR008475 Bacterial phospholipase C, C-terminal domain CLM98_17285 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_17285 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLM98_17290 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_17290 IPR007312 Phosphoesterase CLM98_17290 IPR008475 Bacterial phospholipase C, C-terminal domain CLM98_17290 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLM98_17290 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLM98_17305 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_17305 IPR023650 Beta-lactamase, class-A active site CLM98_17305 IPR000871 Beta-lactamase, class-A CLM98_17305 IPR012338 Beta-lactamase/transpeptidase-like CLM98_17310 IPR037420 HTH-type transcriptional activator AmpR, PBP2 CLM98_17310 IPR005119 LysR, substrate-binding CLM98_17310 IPR000847 Transcription regulator HTH, LysR CLM98_17310 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_17310 IPR036390 Winged helix DNA-binding domain superfamily CLM98_17320 IPR017871 ABC transporter, conserved site CLM98_17320 IPR003439 ABC transporter-like CLM98_17320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17320 IPR003593 AAA+ ATPase domain CLM98_17320 IPR032781 ABC-transporter extension domain CLM98_17325 IPR010917 TonB-dependent receptor, conserved site CLM98_17325 IPR012910 TonB-dependent receptor, plug domain CLM98_17325 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17325 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17325 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_17325 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17325 IPR010916 TonB box, conserved site CLM98_17325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17340 IPR010917 TonB-dependent receptor, conserved site CLM98_17340 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17340 IPR010916 TonB box, conserved site CLM98_17340 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17340 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17340 IPR012910 TonB-dependent receptor, plug domain CLM98_17340 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17340 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_17345 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17345 IPR012910 TonB-dependent receptor, plug domain CLM98_17345 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17345 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17345 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17345 IPR010917 TonB-dependent receptor, conserved site CLM98_17345 IPR010105 TonB-dependent siderophore receptor CLM98_17350 IPR036396 Cytochrome P450 superfamily CLM98_17350 IPR001128 Cytochrome P450 CLM98_17350 IPR017972 Cytochrome P450, conserved site CLM98_17350 IPR002397 Cytochrome P450, B-class CLM98_17360 IPR036291 NAD(P)-binding domain superfamily CLM98_17360 IPR038770 Sodium/solute symporter superfamily CLM98_17360 IPR004771 K+/H+ exchanger CLM98_17360 IPR006153 Cation/H+ exchanger CLM98_17360 IPR003148 Regulator of K+ conductance, N-terminal CLM98_17385 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17385 IPR010105 TonB-dependent siderophore receptor CLM98_17385 IPR010917 TonB-dependent receptor, conserved site CLM98_17385 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17385 IPR010916 TonB box, conserved site CLM98_17385 IPR011662 Secretin/TonB, short N-terminal domain CLM98_17385 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17385 IPR012910 TonB-dependent receptor, plug domain CLM98_17395 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CLM98_17395 IPR022770 Ferric iron reductase FhuF domain CLM98_17395 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CLM98_17400 IPR011701 Major facilitator superfamily CLM98_17400 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CLM98_17400 IPR020846 Major facilitator superfamily domain CLM98_17400 IPR036259 MFS transporter superfamily CLM98_17400 IPR023692 Multidrug resistance protein MdtG CLM98_17410 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_17410 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CLM98_17410 IPR022272 Lipocalin family conserved site CLM98_17410 IPR000183 Ornithine/DAP/Arg decarboxylase CLM98_17410 IPR002433 Ornithine decarboxylase CLM98_17410 IPR029066 PLP-binding barrel CLM98_17410 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLM98_17425 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CLM98_17435 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CLM98_17435 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CLM98_17435 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CLM98_17435 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CLM98_17440 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CLM98_17440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17445 IPR011698 CobB/CobQ-like glutamine amidotransferase CLM98_17445 IPR029062 Class I glutamine amidotransferase-like CLM98_17445 IPR017929 CobB/CobQ glutamine amidotransferase CLM98_17445 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_17445 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CLM98_17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17445 IPR004459 Cobyric acid synthase CobQ CLM98_17450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_17450 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_17450 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLM98_17450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_17450 IPR004839 Aminotransferase, class I/classII CLM98_17450 IPR005860 L-threonine-O-3-phosphate decarboxylase CLM98_17455 IPR004485 Cobalamin biosynthesis CobD/CbiB CLM98_17455 IPR031347 Protein AmpE CLM98_17460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17460 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CLM98_17460 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CLM98_17475 IPR012910 TonB-dependent receptor, plug domain CLM98_17475 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17475 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_17475 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17475 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17475 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17480 IPR001270 ClpA/B family CLM98_17480 IPR018368 ClpA/B, conserved site 1 CLM98_17480 IPR028299 ClpA/B, conserved site 2 CLM98_17480 IPR041546 ClpA/ClpB, AAA lid domain CLM98_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17480 IPR004176 Clp, N-terminal CLM98_17480 IPR036628 Clp, N-terminal domain superfamily CLM98_17480 IPR019489 Clp ATPase, C-terminal CLM98_17480 IPR003593 AAA+ ATPase domain CLM98_17480 IPR003959 ATPase, AAA-type, core CLM98_17480 IPR017730 Chaperonin ClpB CLM98_17485 IPR017871 ABC transporter, conserved site CLM98_17485 IPR003439 ABC transporter-like CLM98_17485 IPR003593 AAA+ ATPase domain CLM98_17485 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CLM98_17485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_17490 IPR035906 MetI-like superfamily CLM98_17495 IPR010067 Aliphatic sulfonates-binding protein CLM98_17495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLM98_17495 IPR015168 SsuA/THI5-like CLM98_17500 IPR023210 NADP-dependent oxidoreductase domain CLM98_17500 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_17510 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17510 IPR010105 TonB-dependent siderophore receptor CLM98_17510 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17510 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17510 IPR012910 TonB-dependent receptor, plug domain CLM98_17515 IPR035901 GIY-YIG endonuclease superfamily CLM98_17515 IPR000305 GIY-YIG endonuclease CLM98_17550 IPR039426 Vitamin B12 transporter BtuB-like CLM98_17550 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_17550 IPR010916 TonB box, conserved site CLM98_17550 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_17550 IPR010917 TonB-dependent receptor, conserved site CLM98_17550 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_17550 IPR012910 TonB-dependent receptor, plug domain CLM98_17550 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_17555 IPR036412 HAD-like superfamily CLM98_17555 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLM98_17555 IPR003337 Trehalose-phosphatase CLM98_17555 IPR023214 HAD superfamily CLM98_17560 IPR008928 Six-hairpin glycosidase superfamily CLM98_17560 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_17560 IPR011613 GH15-like domain CLM98_17565 IPR012766 Alpha,alpha-trehalose-phosphate synthase CLM98_17565 IPR001830 Glycosyl transferase, family 20 CLM98_17570 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_17570 IPR017511 PQQ-dependent membrane bound dehydrogenase CLM98_17570 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLM98_17570 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_17570 IPR001479 Quinoprotein dehydrogenase, conserved site CLM98_17580 IPR004090 Chemotaxis methyl-accepting receptor CLM98_17580 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLM98_17580 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLM98_17580 IPR003660 HAMP domain CLM98_17580 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLM98_17580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_17585 IPR007263 Protein of unknown function DUF393 CLM98_17600 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_17600 IPR036986 RNA-binding S4 domain superfamily CLM98_17600 IPR002942 RNA-binding S4 domain CLM98_17600 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_17600 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_17600 IPR006225 Pseudouridine synthase, RluC/RluD CLM98_17605 IPR017689 Outer membrane protein assembly factor BamD CLM98_17605 IPR039565 Outer membrane lipoprotein BamD-like CLM98_17605 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_17615 IPR000132 Nitrilase/cyanide hydratase, conserved site CLM98_17615 IPR003694 NAD(+) synthetase CLM98_17615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_17615 IPR022310 NAD/GMP synthase CLM98_17615 IPR014445 Glutamine-dependent NAD(+) synthetase CLM98_17615 IPR036526 Carbon-nitrogen hydrolase superfamily CLM98_17615 IPR003010 Carbon-nitrogen hydrolase CLM98_17660 IPR000768 NAD:arginine ADP-ribosyltransferase, ART CLM98_17685 IPR016102 Succinyl-CoA synthetase-like CLM98_17685 IPR036291 NAD(P)-binding domain superfamily CLM98_17685 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLM98_17685 IPR005810 Succinyl-CoA ligase, alpha subunit CLM98_17685 IPR003781 CoA-binding CLM98_17685 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CLM98_17685 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CLM98_17690 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CLM98_17690 IPR011761 ATP-grasp fold CLM98_17690 IPR005809 Succinate--CoA synthetase, beta subunit CLM98_17690 IPR013815 ATP-grasp fold, subdomain 1 CLM98_17690 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CLM98_17690 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLM98_17690 IPR016102 Succinyl-CoA synthetase-like CLM98_17695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17695 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17695 IPR005467 Histidine kinase domain CLM98_17695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_17695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_17695 IPR000014 PAS domain CLM98_17695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17700 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_17700 IPR025944 Sigma-54 interaction domain, conserved site CLM98_17700 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_17700 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_17700 IPR001789 Signal transduction response regulator, receiver domain CLM98_17700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17700 IPR002197 DNA binding HTH domain, Fis-type CLM98_17700 IPR009057 Homeobox-like domain superfamily CLM98_17700 IPR011006 CheY-like superfamily CLM98_17700 IPR003593 AAA+ ATPase domain CLM98_17705 IPR007831 General secretory system II, protein E, N-terminal CLM98_17705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17705 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_17705 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_17705 IPR042181 Type II secretion system, protein E, N-terminal CLM98_17705 IPR001482 Type II/IV secretion system protein CLM98_17710 IPR001482 Type II/IV secretion system protein CLM98_17710 IPR007831 General secretory system II, protein E, N-terminal CLM98_17710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17710 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_17710 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_17710 IPR042181 Type II secretion system, protein E, N-terminal CLM98_17715 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_17715 IPR001482 Type II/IV secretion system protein CLM98_17715 IPR042181 Type II secretion system, protein E, N-terminal CLM98_17715 IPR007831 General secretory system II, protein E, N-terminal CLM98_17715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17715 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17720 IPR042181 Type II secretion system, protein E, N-terminal CLM98_17720 IPR007831 General secretory system II, protein E, N-terminal CLM98_17720 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_17720 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_17720 IPR001482 Type II/IV secretion system protein CLM98_17725 IPR012902 Prokaryotic N-terminal methylation site CLM98_17725 IPR001082 Fimbrial protein pilin CLM98_17725 IPR000983 Bacterial general secretion pathway protein G-type pilin CLM98_17730 IPR012902 Prokaryotic N-terminal methylation site CLM98_17730 IPR001082 Fimbrial protein pilin CLM98_17735 IPR018076 Type II secretion system F domain CLM98_17735 IPR003004 GspF/PilC family CLM98_17735 IPR001992 Type II secretion system conserved site CLM98_17735 IPR042094 Type II secretion system F domain superfamily CLM98_17740 IPR010627 Peptidase A24A, N-terminal CLM98_17740 IPR000045 Prepilin type IV endopeptidase, peptidase domain CLM98_17740 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLM98_17745 IPR001977 Dephospho-CoA kinase CLM98_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17775 IPR031967 PhoR, single Cache-like domain CLM98_17775 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17775 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_17775 IPR005467 Histidine kinase domain CLM98_17775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17775 IPR000014 PAS domain CLM98_17775 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_17775 IPR013767 PAS fold CLM98_17775 IPR035965 PAS domain superfamily CLM98_17780 IPR001789 Signal transduction response regulator, receiver domain CLM98_17780 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_17780 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_17780 IPR039420 Transcriptional regulatory protein WalR-like CLM98_17780 IPR011006 CheY-like superfamily CLM98_17795 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_17795 IPR013780 Glycosyl hydrolase, all-beta CLM98_17795 IPR017853 Glycoside hydrolase superfamily CLM98_17795 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_17795 IPR011837 Glycogen debranching enzyme, GlgX type CLM98_17795 IPR014756 Immunoglobulin E-set CLM98_17795 IPR013783 Immunoglobulin-like fold CLM98_17865 IPR025657 RadC-like JAB domain CLM98_17865 IPR037518 MPN domain CLM98_17865 IPR010994 RuvA domain 2-like CLM98_17865 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_17865 IPR001405 Uncharacterised protein family UPF0758 CLM98_17890 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17890 IPR000014 PAS domain CLM98_17890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_17890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_17890 IPR005467 Histidine kinase domain CLM98_17890 IPR035965 PAS domain superfamily CLM98_17890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17890 IPR001789 Signal transduction response regulator, receiver domain CLM98_17890 IPR000700 PAS-associated, C-terminal CLM98_17890 IPR011006 CheY-like superfamily CLM98_17890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17890 IPR001610 PAC motif CLM98_17895 IPR000700 PAS-associated, C-terminal CLM98_17895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17895 IPR001610 PAC motif CLM98_17895 IPR011006 CheY-like superfamily CLM98_17895 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17895 IPR001789 Signal transduction response regulator, receiver domain CLM98_17895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_17895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_17895 IPR005467 Histidine kinase domain CLM98_17895 IPR035965 PAS domain superfamily CLM98_17895 IPR000014 PAS domain CLM98_17985 IPR035965 PAS domain superfamily CLM98_17985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_17985 IPR001789 Signal transduction response regulator, receiver domain CLM98_17985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17985 IPR013656 PAS fold-4 CLM98_17985 IPR000014 PAS domain CLM98_17985 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_17985 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_17985 IPR005467 Histidine kinase domain CLM98_17985 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_17985 IPR011006 CheY-like superfamily CLM98_18015 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CLM98_18015 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CLM98_18035 IPR036514 SGNH hydrolase superfamily CLM98_18035 IPR006315 Outer membrane autotransporter barrel CLM98_18035 IPR008265 Lipase, GDSL, active site CLM98_18035 IPR005546 Autotransporter beta-domain CLM98_18035 IPR001087 GDSL lipase/esterase CLM98_18035 IPR036709 Autotransporter beta-domain superfamily CLM98_18035 IPR017186 Lipase, autotransporter EstA CLM98_18045 IPR008867 Thiazole synthase CLM98_18045 IPR013785 Aldolase-type TIM barrel CLM98_18045 IPR033983 Thiazole synthase ThiG CLM98_18055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_18055 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CLM98_18060 IPR004680 Citrate transporter-like domain CLM98_18060 IPR031312 Sodium/sulphate symporter, conserved site CLM98_18060 IPR006037 Regulator of K+ conductance, C-terminal CLM98_18060 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CLM98_18080 IPR011234 Fumarylacetoacetase-like, C-terminal CLM98_18080 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLM98_18085 IPR036019 Gated mechanosensitive channel CLM98_18085 IPR019823 Large-conductance mechanosensitive channel, conserved site CLM98_18085 IPR001185 Large-conductance mechanosensitive channel CLM98_18085 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CLM98_18095 IPR000843 LacI-type HTH domain CLM98_18095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_18095 IPR028082 Periplasmic binding protein-like I CLM98_18095 IPR023588 Transcription regulator HTH, PurR CLM98_18105 IPR013783 Immunoglobulin-like fold CLM98_18105 IPR017853 Glycoside hydrolase superfamily CLM98_18105 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_18105 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_18105 IPR008979 Galactose-binding-like domain superfamily CLM98_18105 IPR028829 Exo-beta-D-glucosaminidase CLM98_18105 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CLM98_18105 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain CLM98_18110 IPR017853 Glycoside hydrolase superfamily CLM98_18110 IPR013780 Glycosyl hydrolase, all-beta CLM98_18110 IPR029486 Glycosyl-hydrolase 97, N-terminal domain CLM98_18110 IPR019563 Glycosyl-hydrolase 97, catalytic domain CLM98_18110 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain CLM98_18110 IPR013785 Aldolase-type TIM barrel CLM98_18110 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_18120 IPR000997 Cholinesterase CLM98_18120 IPR029058 Alpha/Beta hydrolase fold CLM98_18120 IPR002018 Carboxylesterase, type B CLM98_18120 IPR019826 Carboxylesterase type B, active site CLM98_18120 IPR019819 Carboxylesterase type B, conserved site CLM98_18125 IPR029028 Alpha/beta knot methyltransferases CLM98_18125 IPR029064 50S ribosomal protein L30e-like CLM98_18125 IPR004441 RNA methyltransferase TrmH family CLM98_18125 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_18125 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLM98_18125 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CLM98_18125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_18135 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CLM98_18135 IPR042097 Aminopeptidase N-like , N-terminal CLM98_18135 IPR014782 Peptidase M1, membrane alanine aminopeptidase CLM98_18135 IPR034016 Aminopeptidase N-type CLM98_18135 IPR024571 ERAP1-like C-terminal domain CLM98_18200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_18200 IPR001036 Acriflavin resistance protein CLM98_18205 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_18205 IPR006143 RND efflux pump, membrane fusion protein CLM98_18210 IPR000795 Transcription factor, GTP-binding domain CLM98_18210 IPR011779 Sulphate adenylyltransferase, large subunit CLM98_18210 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18210 IPR031157 Tr-type G domain, conserved site CLM98_18210 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CLM98_18210 IPR002891 Adenylyl-sulfate kinase CLM98_18210 IPR009000 Translation protein, beta-barrel domain superfamily CLM98_18215 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_18215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_18215 IPR011784 Sulphate adenylyltransferase, small subunit CLM98_18220 IPR001094 Flavodoxin-like CLM98_18220 IPR008254 Flavodoxin/nitric oxide synthase CLM98_18220 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_18220 IPR029039 Flavoprotein-like superfamily CLM98_18220 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CLM98_18220 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_18220 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CLM98_18220 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_18220 IPR017938 Riboflavin synthase-like beta-barrel CLM98_18220 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CLM98_18220 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CLM98_18220 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_18225 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CLM98_18225 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CLM98_18225 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CLM98_18225 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CLM98_18225 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CLM98_18230 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_18230 IPR011800 Phosphoadenosine phosphosulphate reductase CysH CLM98_18230 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CLM98_18230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_18250 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_18250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_18250 IPR036641 HPT domain superfamily CLM98_18250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_18250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_18250 IPR005467 Histidine kinase domain CLM98_18250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_18250 IPR011006 CheY-like superfamily CLM98_18250 IPR001789 Signal transduction response regulator, receiver domain CLM98_18250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_18265 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_18265 IPR036390 Winged helix DNA-binding domain superfamily CLM98_18265 IPR005119 LysR, substrate-binding CLM98_18265 IPR000847 Transcription regulator HTH, LysR CLM98_18270 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLM98_18270 IPR035996 Tetrapyrrole methylase superfamily CLM98_18270 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_18270 IPR014776 Tetrapyrrole methylase, subdomain 2 CLM98_18270 IPR006366 Uroporphyrin-III C-methyltransferase CLM98_18270 IPR000878 Tetrapyrrole methylase CLM98_18270 IPR012409 Sirohaem synthase CLM98_18270 IPR028281 Siroheme synthase, central domain CLM98_18270 IPR036291 NAD(P)-binding domain superfamily CLM98_18270 IPR006367 Sirohaem synthase, N-terminal CLM98_18270 IPR019478 Sirohaem synthase, dimerisation domain CLM98_18275 IPR005856 Cysteine synthase CLM98_18275 IPR005859 Cysteine synthase CysK CLM98_18275 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLM98_18275 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_18275 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_18285 IPR002589 Macro domain CLM98_18290 IPR000741 Fructose-bisphosphate aldolase, class-I CLM98_18290 IPR013785 Aldolase-type TIM barrel CLM98_18290 IPR029768 Fructose-bisphosphate aldolase class-I active site CLM98_18305 IPR015795 Pyruvate kinase, C-terminal CLM98_18305 IPR036918 Pyruvate kinase, C-terminal domain superfamily CLM98_18305 IPR015793 Pyruvate kinase, barrel CLM98_18305 IPR018209 Pyruvate kinase, active site CLM98_18305 IPR011037 Pyruvate kinase-like, insert domain superfamily CLM98_18305 IPR040442 Pyruvate kinase-like domain superfamily CLM98_18305 IPR015806 Pyruvate kinase, insert domain superfamily CLM98_18305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLM98_18305 IPR001697 Pyruvate kinase CLM98_18315 IPR015911 Phosphoglycerate kinase, conserved site CLM98_18315 IPR001576 Phosphoglycerate kinase CLM98_18315 IPR015824 Phosphoglycerate kinase, N-terminal CLM98_18315 IPR036043 Phosphoglycerate kinase superfamily CLM98_18340 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLM98_18340 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLM98_18340 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLM98_18340 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLM98_18340 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLM98_18340 IPR036291 NAD(P)-binding domain superfamily CLM98_18350 IPR005618 Outer membrane protein, OmpW CLM98_18350 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLM98_18355 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLM98_18355 IPR005618 Outer membrane protein, OmpW CLM98_18365 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_18365 IPR005939 Beta-lactamase hydrolase-like CLM98_18365 IPR029021 Protein-tyrosine phosphatase-like CLM98_18365 IPR001279 Metallo-beta-lactamase CLM98_18370 IPR005950 Molybdate ABC transporter, substrate-binding protein CLM98_18375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_18375 IPR035906 MetI-like superfamily CLM98_18375 IPR011867 Molybdate ABC transporter, permease protein CLM98_18380 IPR004606 Molybdenum-pterin binding CLM98_18380 IPR017871 ABC transporter, conserved site CLM98_18380 IPR015852 ABC transporter, molybdenum import, ModC CLM98_18380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18380 IPR003439 ABC transporter-like CLM98_18380 IPR003593 AAA+ ATPase domain CLM98_18380 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_18380 IPR011868 Molybdate ABC transporter, ATP-binding protein CLM98_18380 IPR005116 Transport-associated OB, type 1 CLM98_18415 IPR005490 L,D-transpeptidase catalytic domain CLM98_18415 IPR036779 LysM domain superfamily CLM98_18415 IPR038063 L,D-transpeptidase catalytic domain-like CLM98_18415 IPR018392 LysM domain CLM98_18420 IPR016047 Peptidase M23 CLM98_18420 IPR007340 Opacity-associated protein A CLM98_18420 IPR011055 Duplicated hybrid motif CLM98_18430 IPR010916 TonB box, conserved site CLM98_18430 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_18430 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_18430 IPR010917 TonB-dependent receptor, conserved site CLM98_18430 IPR010105 TonB-dependent siderophore receptor CLM98_18430 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_18430 IPR039423 TonB-dependent receptor-like CLM98_18430 IPR012910 TonB-dependent receptor, plug domain CLM98_18435 IPR022742 Serine aminopeptidase, S33 CLM98_18435 IPR002410 Peptidase S33 CLM98_18435 IPR029058 Alpha/Beta hydrolase fold CLM98_18440 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_18440 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLM98_18440 IPR029061 Thiamin diphosphate-binding fold CLM98_18440 IPR005478 Transketolase, bacterial-like CLM98_18440 IPR020826 Transketolase binding site CLM98_18440 IPR005474 Transketolase, N-terminal CLM98_18440 IPR033247 Transketolase family CLM98_18440 IPR033248 Transketolase, C-terminal domain CLM98_18445 IPR033380 Glutamate-aspartate symport protein GltP/GltT CLM98_18445 IPR034703 Proton/glutamate-aspartate symporter GltP CLM98_18445 IPR036458 Sodium:dicarboxylate symporter superfamily CLM98_18445 IPR018107 Sodium:dicarboxylate symporter, conserved site CLM98_18445 IPR001991 Sodium:dicarboxylate symporter CLM98_18460 IPR024163 Aerotolerance regulator, N-terminal CLM98_18460 IPR022933 Uncharacterised protein family UPF0353 CLM98_18460 IPR002035 von Willebrand factor, type A CLM98_18460 IPR036465 von Willebrand factor A-like domain superfamily CLM98_18480 IPR041628 ChlI/MoxR, AAA lid domain CLM98_18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18480 IPR011703 ATPase, AAA-3 CLM98_18515 IPR012338 Beta-lactamase/transpeptidase-like CLM98_18515 IPR001460 Penicillin-binding protein, transpeptidase CLM98_18515 IPR036950 Penicillin binding protein transglycosylase domain CLM98_18515 IPR023346 Lysozyme-like domain superfamily CLM98_18515 IPR001264 Glycosyl transferase, family 51 CLM98_18515 IPR031376 Penicillin-binding protein, OB-like domain CLM98_18525 IPR010953 Citrate synthase, type I CLM98_18525 IPR036969 Citrate synthase superfamily CLM98_18525 IPR016143 Citrate synthase-like, small alpha subdomain CLM98_18525 IPR002020 Citrate synthase CLM98_18525 IPR019810 Citrate synthase active site CLM98_18525 IPR024176 Citrate synthase, bacterial-type CLM98_18525 IPR016142 Citrate synthase-like, large alpha subdomain CLM98_18530 IPR042105 Ribosomal protein L31 superfamily CLM98_18530 IPR027493 Ribosomal protein L31 type B CLM98_18530 IPR002150 Ribosomal protein L31 CLM98_18530 IPR034704 L28p-like CLM98_18535 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_18535 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CLM98_18535 IPR036452 Ribonucleoside hydrolase-like CLM98_18535 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CLM98_18535 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CLM98_18540 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_18540 IPR001650 Helicase, C-terminal CLM98_18540 IPR012340 Nucleic acid-binding, OB-fold CLM98_18540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18540 IPR004609 ATP-dependent DNA helicase RecG CLM98_18540 IPR033454 RecG, wedge domain CLM98_18540 IPR011545 DEAD/DEAH box helicase domain CLM98_18545 IPR006175 YjgF/YER057c/UK114 family CLM98_18545 IPR035959 RutC-like superfamily CLM98_18545 IPR019897 RidA, conserved site CLM98_18545 IPR006056 RidA family CLM98_18550 IPR033655 RelA, TGS domain CLM98_18550 IPR012676 TGS-like CLM98_18550 IPR004095 TGS CLM98_18550 IPR007685 RelA/SpoT CLM98_18550 IPR003607 HD/PDEase domain CLM98_18550 IPR012675 Beta-grasp domain superfamily CLM98_18550 IPR002912 ACT domain CLM98_18550 IPR004811 RelA/SpoT family CLM98_18555 IPR036161 RPB6/omega subunit-like superfamily CLM98_18555 IPR012293 RNA polymerase subunit, RPB6/omega CLM98_18555 IPR006110 RNA polymerase, subunit omega/K/RPB6 CLM98_18555 IPR003716 DNA-directed RNA polymerase, omega subunit CLM98_18560 IPR017665 Guanylate kinase CLM98_18560 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLM98_18560 IPR008144 Guanylate kinase-like domain CLM98_18560 IPR020590 Guanylate kinase, conserved site CLM98_18560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18565 IPR013527 YicC-like, N-terminal CLM98_18565 IPR005229 Conserved hypothetical protein CHP00255 CLM98_18565 IPR013551 Domain of unknown function DUF1732 CLM98_18570 IPR018336 Ribonuclease PH, conserved site CLM98_18570 IPR027408 PNPase/RNase PH domain superfamily CLM98_18570 IPR002381 Ribonuclease PH, bacterial-type CLM98_18570 IPR036345 Exoribonuclease, PH domain 2 superfamily CLM98_18570 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_18570 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLM98_18570 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLM98_18580 IPR002637 Ham1-like protein CLM98_18580 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_18580 IPR020922 dITP/XTP pyrophosphatase CLM98_18585 IPR007197 Radical SAM CLM98_18585 IPR004559 Heme chaperone HemW-like CLM98_18585 IPR006638 Elp3/MiaB/NifB CLM98_18585 IPR010723 HemN, C-terminal CLM98_18585 IPR034505 Anaerobic coproporphyrinogen-III oxidase CLM98_18585 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_18600 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLM98_18600 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_18600 IPR022846 Xaa-Pro dipeptidase CLM98_18600 IPR036005 Creatinase/aminopeptidase-like CLM98_18600 IPR000994 Peptidase M24 CLM98_18610 IPR000994 Peptidase M24 CLM98_18610 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_18610 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLM98_18610 IPR036005 Creatinase/aminopeptidase-like CLM98_18610 IPR007865 Aminopeptidase P, N-terminal CLM98_18610 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_18615 IPR011978 Uncharacterised protein family UPF0149 CLM98_18615 IPR036255 YgfB-like superfamily CLM98_18625 IPR007838 Cell division protein ZapA-like CLM98_18625 IPR036192 Cell division protein ZapA-like superfamily CLM98_18635 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CLM98_18635 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLM98_18635 IPR037171 NagB/RpiA transferase-like CLM98_18645 IPR004788 Ribose 5-phosphate isomerase, type A CLM98_18645 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CLM98_18645 IPR037171 NagB/RpiA transferase-like CLM98_18655 IPR013026 Tetratricopeptide repeat-containing domain CLM98_18655 IPR019734 Tetratricopeptide repeat CLM98_18655 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_18655 IPR032698 Protein SirB1, N-terminal CLM98_18660 IPR024934 Rubredoxin-like domain CLM98_18660 IPR024935 Rubredoxin domain CLM98_18660 IPR018527 Rubredoxin, iron-binding site CLM98_18660 IPR024922 Rubredoxin CLM98_18665 IPR036206 Thiamin phosphate synthase superfamily CLM98_18665 IPR022998 Thiamine phosphate synthase/TenI CLM98_18665 IPR034291 Thiamine phosphate synthase CLM98_18665 IPR013785 Aldolase-type TIM barrel CLM98_18680 IPR005814 Aminotransferase class-III CLM98_18680 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_18680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_18680 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CLM98_18685 IPR023768 Transcriptional regulator HTH-type, MalT CLM98_18685 IPR000792 Transcription regulator LuxR, C-terminal CLM98_18685 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_18685 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_18685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18685 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_18685 IPR041617 MalT-like TPR region CLM98_18690 IPR000923 Blue (type 1) copper domain CLM98_18690 IPR008972 Cupredoxin CLM98_18690 IPR028871 Blue (type 1) copper protein, binding site CLM98_18690 IPR014068 Azurin CLM98_18695 IPR005861 Histidinol-phosphate aminotransferase family CLM98_18695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_18695 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_18695 IPR004839 Aminotransferase, class I/classII CLM98_18705 IPR009056 Cytochrome c-like domain CLM98_18705 IPR036909 Cytochrome c-like domain superfamily CLM98_18705 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CLM98_18710 IPR014105 Carotenoid/retinoid oxidoreductase CLM98_18710 IPR002937 Amine oxidase CLM98_18710 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_18725 IPR005814 Aminotransferase class-III CLM98_18725 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_18725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_18725 IPR004636 Acetylornithine/Succinylornithine transaminase family CLM98_18730 IPR018490 Cyclic nucleotide-binding-like CLM98_18730 IPR014710 RmlC-like jelly roll fold CLM98_18730 IPR005821 Ion transport domain CLM98_18730 IPR000595 Cyclic nucleotide-binding domain CLM98_18730 IPR018488 Cyclic nucleotide-binding, conserved site CLM98_18730 IPR028325 Voltage-gated potassium channel CLM98_18740 IPR036291 NAD(P)-binding domain superfamily CLM98_18740 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_18740 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_18750 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_18750 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLM98_18755 IPR021134 Bestrophin/UPF0187 CLM98_18765 IPR036615 Mur ligase, C-terminal domain superfamily CLM98_18765 IPR005757 Murein peptide ligase CLM98_18765 IPR036565 Mur-like, catalytic domain superfamily CLM98_18765 IPR004101 Mur ligase, C-terminal CLM98_18765 IPR000713 Mur ligase, N-terminal catalytic domain CLM98_18765 IPR013221 Mur ligase, central CLM98_18770 IPR000850 Adenylate kinase/UMP-CMP kinase CLM98_18770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18770 IPR033690 Adenylate kinase, conserved site CLM98_18775 IPR035966 Phosphofructokinase superfamily CLM98_18775 IPR000023 Phosphofructokinase domain CLM98_18775 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 CLM98_18775 IPR022953 ATP-dependent 6-phosphofructokinase CLM98_18785 IPR004131 Pyrophosphate-energised proton pump CLM98_18795 IPR036649 Inorganic pyrophosphatase superfamily CLM98_18795 IPR008162 Inorganic pyrophosphatase CLM98_18805 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_18805 IPR039426 Vitamin B12 transporter BtuB-like CLM98_18805 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_18805 IPR012910 TonB-dependent receptor, plug domain CLM98_18805 IPR010916 TonB box, conserved site CLM98_18805 IPR010917 TonB-dependent receptor, conserved site CLM98_18805 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_18805 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_18810 IPR018060 DNA binding HTH domain, AraC-type CLM98_18810 IPR029062 Class I glutamine amidotransferase-like CLM98_18810 IPR018062 HTH domain AraC-type, conserved site CLM98_18810 IPR009057 Homeobox-like domain superfamily CLM98_18810 IPR020449 Transcription regulator HTH, AraC- type CLM98_18815 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_18815 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_18815 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_18815 IPR039420 Transcriptional regulatory protein WalR-like CLM98_18815 IPR040970 CadC C-terminal domain 1 CLM98_18815 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_18820 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CLM98_18820 IPR038521 ThiC/Bza superfamily CLM98_18820 IPR025747 ThiC-associated domain CLM98_18820 IPR037509 Phosphomethylpyrimidine synthase CLM98_18830 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_18830 IPR010917 TonB-dependent receptor, conserved site CLM98_18830 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_18830 IPR010916 TonB box, conserved site CLM98_18830 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_18830 IPR012910 TonB-dependent receptor, plug domain CLM98_18830 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_18830 IPR039426 Vitamin B12 transporter BtuB-like CLM98_18835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_18835 IPR003660 HAMP domain CLM98_18835 IPR004090 Chemotaxis methyl-accepting receptor CLM98_18840 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_18840 IPR000101 Gamma-glutamyltranspeptidase CLM98_18845 IPR000506 Ketol-acid reductoisomerase, C-terminal CLM98_18845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_18845 IPR013116 Ketol-acid reductoisomerase, N-terminal CLM98_18845 IPR014359 Ketol-acid reductoisomerase, prokaryotic CLM98_18845 IPR036291 NAD(P)-binding domain superfamily CLM98_18845 IPR013023 Ketol-acid reductoisomerase CLM98_18850 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLM98_18850 IPR039368 Acetolactate synthase large subunit, TPP binding domain CLM98_18850 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLM98_18850 IPR012000 Thiamine pyrophosphate enzyme, central domain CLM98_18850 IPR029061 Thiamin diphosphate-binding fold CLM98_18850 IPR012846 Acetolactate synthase, large subunit, biosynthetic CLM98_18850 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLM98_18850 IPR000399 TPP-binding enzyme, conserved site CLM98_18860 IPR005789 Threonine dehydratase, catabolic CLM98_18860 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_18860 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_18860 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLM98_18865 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CLM98_18865 IPR000891 Pyruvate carboxyltransferase CLM98_18865 IPR005671 2-isopropylmalate synthase, bacterial-type CLM98_18865 IPR013785 Aldolase-type TIM barrel CLM98_18865 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CLM98_18865 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CLM98_18870 IPR004429 Isopropylmalate dehydrogenase CLM98_18870 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLM98_18870 IPR024084 Isopropylmalate dehydrogenase-like domain CLM98_18875 IPR004431 3-isopropylmalate dehydratase, small subunit CLM98_18875 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_18875 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLM98_18875 IPR033940 3-isopropylmalate dehydratase, swivel domain CLM98_18880 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_18880 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_18880 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLM98_18880 IPR036008 Aconitase, iron-sulfur domain CLM98_18880 IPR004430 3-isopropylmalate dehydratase, large subunit CLM98_18880 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CLM98_18885 IPR036390 Winged helix DNA-binding domain superfamily CLM98_18885 IPR000847 Transcription regulator HTH, LysR CLM98_18885 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_18890 IPR000160 GGDEF domain CLM98_18890 IPR029787 Nucleotide cyclase CLM98_18890 IPR033416 Periplasmic sensor domain CHASE7 CLM98_18900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_18900 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CLM98_18905 IPR003423 Outer membrane efflux protein CLM98_18905 IPR010130 Type I secretion outer membrane protein, TolC CLM98_18910 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CLM98_18910 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CLM98_18910 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CLM98_18920 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CLM98_18920 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLM98_18945 IPR015884 Malic enzyme, conserved site CLM98_18945 IPR042112 Phosphate acetyltransferase, domain 2 CLM98_18945 IPR042113 Phosphate acetyltransferase, domain 1 CLM98_18945 IPR036291 NAD(P)-binding domain superfamily CLM98_18945 IPR012188 NAD(P)-dependent malic enzyme CLM98_18945 IPR037062 Malic enzyme, N-terminal domain superfamily CLM98_18945 IPR012301 Malic enzyme, N-terminal domain CLM98_18945 IPR012302 Malic enzyme, NAD-binding CLM98_18945 IPR002505 Phosphate acetyl/butaryl transferase CLM98_18950 IPR023954 C4-dicarboxylate transport protein CLM98_18950 IPR001991 Sodium:dicarboxylate symporter CLM98_18950 IPR018107 Sodium:dicarboxylate symporter, conserved site CLM98_18950 IPR036458 Sodium:dicarboxylate symporter superfamily CLM98_18965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_18965 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_18965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_18965 IPR005467 Histidine kinase domain CLM98_18965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_18965 IPR033479 Double Cache domain 1 CLM98_18965 IPR029151 Periplasmic sensor-like domain superfamily CLM98_18965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_18965 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CLM98_18970 IPR005829 Sugar transporter, conserved site CLM98_18970 IPR004736 MFS transporter, metabolite:H symporter CLM98_18970 IPR011701 Major facilitator superfamily CLM98_18970 IPR036259 MFS transporter superfamily CLM98_18970 IPR020846 Major facilitator superfamily domain CLM98_18980 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_18980 IPR000847 Transcription regulator HTH, LysR CLM98_18980 IPR005119 LysR, substrate-binding CLM98_18980 IPR036390 Winged helix DNA-binding domain superfamily CLM98_18990 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_18990 IPR023210 NADP-dependent oxidoreductase domain CLM98_19005 IPR011006 CheY-like superfamily CLM98_19005 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_19005 IPR001789 Signal transduction response regulator, receiver domain CLM98_19005 IPR000792 Transcription regulator LuxR, C-terminal CLM98_19015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_19015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_19015 IPR013727 Two-component sensor kinase, N-terminal CLM98_19015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_19015 IPR005467 Histidine kinase domain CLM98_19015 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_19015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_19020 IPR011006 CheY-like superfamily CLM98_19020 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_19020 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_19020 IPR001789 Signal transduction response regulator, receiver domain CLM98_19020 IPR039420 Transcriptional regulatory protein WalR-like CLM98_19020 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_19035 IPR014738 Citrate transporter CLM98_19035 IPR004680 Citrate transporter-like domain CLM98_19040 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_19040 IPR036291 NAD(P)-binding domain superfamily CLM98_19040 IPR011283 Acetoacetyl-CoA reductase CLM98_19040 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_19045 IPR023588 Transcription regulator HTH, PurR CLM98_19045 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_19045 IPR028082 Periplasmic binding protein-like I CLM98_19045 IPR000843 LacI-type HTH domain CLM98_19050 IPR018043 Sodium:galactoside symporter, conserved site CLM98_19050 IPR036259 MFS transporter superfamily CLM98_19050 IPR039672 Lactose permease-like CLM98_19060 IPR017853 Glycoside hydrolase superfamily CLM98_19060 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_19060 IPR013780 Glycosyl hydrolase, all-beta CLM98_19075 IPR004881 Ribosome biogenesis GTPase RsgA CLM98_19075 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CLM98_19075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19075 IPR010914 RsgA GTPase domain CLM98_19105 IPR010917 TonB-dependent receptor, conserved site CLM98_19105 IPR010105 TonB-dependent siderophore receptor CLM98_19105 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_19105 IPR039423 TonB-dependent receptor-like CLM98_19105 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_19105 IPR010916 TonB box, conserved site CLM98_19105 IPR012910 TonB-dependent receptor, plug domain CLM98_19105 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_19110 IPR026402 Chitooligosaccharide deacetylase NodB CLM98_19110 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_19110 IPR002509 NodB homology domain CLM98_19115 IPR014434 Monothiol glutaredoxin CLM98_19115 IPR033658 Glutaredoxin, PICOT-like CLM98_19115 IPR004480 Monothiol glutaredoxin-related CLM98_19115 IPR036249 Thioredoxin-like superfamily CLM98_19115 IPR002109 Glutaredoxin CLM98_19155 IPR003797 DegV CLM98_19160 IPR036821 Peptide deformylase superfamily CLM98_19160 IPR023635 Peptide deformylase CLM98_19170 IPR006660 Arsenate reductase-like CLM98_19170 IPR036249 Thioredoxin-like superfamily CLM98_19170 IPR006659 Arsenate reductase CLM98_19190 IPR013026 Tetratricopeptide repeat-containing domain CLM98_19190 IPR011990 Tetratricopeptide-like helical domain superfamily CLM98_19190 IPR019734 Tetratricopeptide repeat CLM98_19190 IPR003921 Cellulose synthase, subunit C CLM98_19190 IPR008410 Cellulose synthase operon C, C-terminal CLM98_19195 IPR008928 Six-hairpin glycosidase superfamily CLM98_19195 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_19195 IPR002037 Glycoside hydrolase, family 8 CLM98_19200 IPR008979 Galactose-binding-like domain superfamily CLM98_19200 IPR018513 Cellulose synthase BcsB, bacterial CLM98_19200 IPR003920 Cellulose synthase, subunit B CLM98_19205 IPR009875 PilZ domain CLM98_19205 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19205 IPR001173 Glycosyltransferase 2-like CLM98_19205 IPR005150 Cellulose synthase CLM98_19205 IPR003919 Cellulose synthase, subunit A CLM98_19220 IPR006406 Nicotinate phosphoribosyltransferase CLM98_19220 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CLM98_19220 IPR007229 Nicotinate phosphoribosyltransferase family CLM98_19220 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CLM98_19220 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CLM98_19250 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19275 IPR036390 Winged helix DNA-binding domain superfamily CLM98_19275 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_19275 IPR011663 UbiC transcription regulator-associated CLM98_19275 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLM98_19275 IPR017722 Phosphonate utilization transcriptional regulator PhnR CLM98_19275 IPR000524 Transcription regulator HTH, GntR CLM98_19285 IPR004845 Type II secretion system GspD, conserved site CLM98_19285 IPR038591 NolW-like superfamily CLM98_19285 IPR013356 Type II secretion system GspD CLM98_19285 IPR004846 Type II/III secretion system CLM98_19285 IPR001775 GspD/PilQ family CLM98_19285 IPR005644 NolW-like CLM98_19295 IPR034756 Type II secretion system (T2SS), protein M subtype b CLM98_19300 IPR007813 Fimbrial assembly PilN CLM98_19305 IPR038072 GspK, central domain superfamily CLM98_19305 IPR005628 General secretion pathway protein K CLM98_19310 IPR012902 Prokaryotic N-terminal methylation site CLM98_19315 IPR012902 Prokaryotic N-terminal methylation site CLM98_19315 IPR010052 Type II secretion system protein I CLM98_19320 IPR002416 Type II secretion system protein H CLM98_19320 IPR022346 General secretion pathway, GspH CLM98_19325 IPR010054 General secretion pathway protein G CLM98_19325 IPR012902 Prokaryotic N-terminal methylation site CLM98_19325 IPR000983 Bacterial general secretion pathway protein G-type pilin CLM98_19325 IPR013545 Type II secretion system protein G CLM98_19330 IPR001992 Type II secretion system conserved site CLM98_19330 IPR003004 GspF/PilC family CLM98_19330 IPR018076 Type II secretion system F domain CLM98_19330 IPR042094 Type II secretion system F domain superfamily CLM98_19340 IPR042181 Type II secretion system, protein E, N-terminal CLM98_19340 IPR003593 AAA+ ATPase domain CLM98_19340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19340 IPR001482 Type II/IV secretion system protein CLM98_19340 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_19340 IPR013369 Type II secretion system GspE CLM98_19340 IPR007831 General secretory system II, protein E, N-terminal CLM98_19345 IPR034176 Peptidase MprA-like catalytic domain CLM98_19345 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_19345 IPR000209 Peptidase S8/S53 domain CLM98_19345 IPR015500 Peptidase S8, subtilisin-related CLM98_19345 IPR036852 Peptidase S8/S53 domain superfamily CLM98_19345 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_19345 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_19345 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_19350 IPR011049 Serralysin-like metalloprotease, C-terminal CLM98_19350 IPR008640 Head domain of trimeric autotransporter adhesin CLM98_19350 IPR008635 Coiled stalk of trimeric autotransporter adhesin CLM98_19350 IPR005594 YadA-like, C-terminal CLM98_19350 IPR024973 ESPR domain CLM98_19355 IPR034176 Peptidase MprA-like catalytic domain CLM98_19355 IPR015500 Peptidase S8, subtilisin-related CLM98_19355 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_19355 IPR000209 Peptidase S8/S53 domain CLM98_19355 IPR036852 Peptidase S8/S53 domain superfamily CLM98_19355 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_19355 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_19355 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_19360 IPR024973 ESPR domain CLM98_19360 IPR008635 Coiled stalk of trimeric autotransporter adhesin CLM98_19360 IPR011049 Serralysin-like metalloprotease, C-terminal CLM98_19360 IPR005594 YadA-like, C-terminal CLM98_19360 IPR008640 Head domain of trimeric autotransporter adhesin CLM98_19370 IPR036676 PurM-like, C-terminal domain superfamily CLM98_19370 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CLM98_19370 IPR036921 PurM-like, N-terminal domain superfamily CLM98_19370 IPR010918 PurM-like, C-terminal domain CLM98_19370 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CLM98_19370 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CLM98_19370 IPR017926 Glutamine amidotransferase CLM98_19370 IPR029062 Class I glutamine amidotransferase-like CLM98_19370 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CLM98_19385 IPR017937 Thioredoxin, conserved site CLM98_19385 IPR036249 Thioredoxin-like superfamily CLM98_19385 IPR012336 Thioredoxin-like fold CLM98_19385 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CLM98_19385 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLM98_19385 IPR013766 Thioredoxin domain CLM98_19385 IPR033954 Disulphide bond isomerase, DsbC/G CLM98_19400 IPR023009 Tyrosine recombinase XerC/XerD CLM98_19400 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_19400 IPR013762 Integrase-like, catalytic domain superfamily CLM98_19400 IPR002104 Integrase, catalytic domain CLM98_19400 IPR011932 Tyrosine recombinase XerD CLM98_19400 IPR010998 Integrase/recombinase, N-terminal CLM98_19400 IPR004107 Integrase, SAM-like, N-terminal CLM98_19415 IPR005495 Permease LptG/LptF-related CLM98_19415 IPR030923 LPS export ABC transporter permease LptG CLM98_19425 IPR023042 Peptidase M17, leucine aminopeptidase CLM98_19425 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CLM98_19425 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CLM98_19425 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CLM98_19440 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_19440 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CLM98_19440 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_19440 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLM98_19440 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_19440 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CLM98_19440 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CLM98_19440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_19440 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_19440 IPR002303 Valine-tRNA ligase CLM98_19440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19445 IPR039426 Vitamin B12 transporter BtuB-like CLM98_19445 IPR012910 TonB-dependent receptor, plug domain CLM98_19445 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_19445 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_19445 IPR010916 TonB box, conserved site CLM98_19445 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_19445 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_19445 IPR010917 TonB-dependent receptor, conserved site CLM98_19450 IPR008258 Transglycosylase SLT domain 1 CLM98_19450 IPR024570 Murein transglycosylase-C, N-terminal CLM98_19450 IPR000189 Prokaryotic transglycosylase, active site CLM98_19450 IPR023664 Murein transglycosylase-C CLM98_19450 IPR023346 Lysozyme-like domain superfamily CLM98_19455 IPR012334 Pectin lyase fold CLM98_19455 IPR002022 Pectate lyase CLM98_19455 IPR011050 Pectin lyase fold/virulence factor CLM98_19470 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CLM98_19470 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_19480 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CLM98_19480 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CLM98_19480 IPR033730 Prokaryote proline-tRNA ligase core domain CLM98_19480 IPR004154 Anticodon-binding CLM98_19480 IPR006195 Aminoacyl-tRNA synthetase, class II CLM98_19480 IPR036621 Anticodon-binding domain superfamily CLM98_19480 IPR002316 Proline-tRNA ligase, class IIa CLM98_19480 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CLM98_19480 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLM98_19480 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLM98_19485 IPR027444 Histone-like protein H-NS, C-terminal domain CLM98_19485 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CLM98_19485 IPR001801 Histone-like protein H-NS CLM98_19495 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CLM98_19495 IPR030802 ABC transporter permease MalE CLM98_19500 IPR003439 ABC transporter-like CLM98_19500 IPR017871 ABC transporter, conserved site CLM98_19500 IPR003593 AAA+ ATPase domain CLM98_19500 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CLM98_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19505 IPR003399 Mce/MlaD CLM98_19505 IPR005586 ABC-type transport auxiliary lipoprotein component CLM98_19520 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_19520 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CLM98_19520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_19525 IPR032719 Glycosyltransferase WbsX CLM98_19525 IPR007739 Rhamnan synthesis F CLM98_19530 IPR012791 3-oxoacid CoA-transferase, subunit B CLM98_19530 IPR037171 NagB/RpiA transferase-like CLM98_19530 IPR004165 Coenzyme A transferase family I CLM98_19530 IPR004164 Coenzyme A transferase active site CLM98_19535 IPR012792 3-oxoacid CoA-transferase, subunit A CLM98_19535 IPR004165 Coenzyme A transferase family I CLM98_19535 IPR004163 Coenzyme A transferase binding site CLM98_19535 IPR037171 NagB/RpiA transferase-like CLM98_19540 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_19540 IPR016066 Alpha-D-phosphohexomutase, conserved site CLM98_19540 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CLM98_19540 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_19540 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_19540 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_19540 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_19540 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_19545 IPR011051 RmlC-like cupin domain superfamily CLM98_19545 IPR014710 RmlC-like jelly roll fold CLM98_19545 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CLM98_19545 IPR005835 Nucleotidyl transferase domain CLM98_19545 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CLM98_19545 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19555 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_19555 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_19555 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CLM98_19555 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_19555 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_19555 IPR036291 NAD(P)-binding domain superfamily CLM98_19555 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CLM98_19555 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_19560 IPR029903 RmlD-like substrate binding domain CLM98_19560 IPR036291 NAD(P)-binding domain superfamily CLM98_19560 IPR005913 dTDP-4-dehydrorhamnose reductase family CLM98_19565 IPR011051 RmlC-like cupin domain superfamily CLM98_19565 IPR014710 RmlC-like jelly roll fold CLM98_19565 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CLM98_19570 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19570 IPR005835 Nucleotidyl transferase domain CLM98_19570 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CLM98_19575 IPR005888 dTDP-glucose 4,6-dehydratase CLM98_19575 IPR016040 NAD(P)-binding domain CLM98_19575 IPR036291 NAD(P)-binding domain superfamily CLM98_19580 IPR012255 Electron transfer flavoprotein, beta subunit CLM98_19580 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLM98_19580 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CLM98_19580 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CLM98_19580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19585 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CLM98_19585 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CLM98_19585 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLM98_19585 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLM98_19585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19585 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CLM98_19585 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLM98_19595 IPR036412 HAD-like superfamily CLM98_19595 IPR000537 UbiA prenyltransferase family CLM98_19595 IPR023214 HAD superfamily CLM98_19595 IPR039653 Prenyltransferase CLM98_19600 IPR006094 FAD linked oxidase, N-terminal CLM98_19600 IPR016169 FAD-binding, type PCMH, subdomain 2 CLM98_19600 IPR016167 FAD-binding, type PCMH, subdomain 1 CLM98_19600 IPR016166 FAD-binding domain, PCMH-type CLM98_19600 IPR036318 FAD-binding, type PCMH-like superfamily CLM98_19600 IPR007173 D-arabinono-1,4-lactone oxidase CLM98_19605 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_19605 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_19605 IPR036291 NAD(P)-binding domain superfamily CLM98_19615 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CLM98_19615 IPR036291 NAD(P)-binding domain superfamily CLM98_19615 IPR001509 NAD-dependent epimerase/dehydratase CLM98_19620 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_19620 IPR023753 FAD/NAD(P)-binding domain CLM98_19620 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_19620 IPR013785 Aldolase-type TIM barrel CLM98_19645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_19645 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19645 IPR001173 Glycosyltransferase 2-like CLM98_19655 IPR029439 Wzt, C-terminal CLM98_19655 IPR003593 AAA+ ATPase domain CLM98_19655 IPR003439 ABC transporter-like CLM98_19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLM98_19665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLM98_19665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLM98_19665 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_19670 IPR001926 Pyridoxal-phosphate dependent enzyme CLM98_19670 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_19670 IPR005857 Cystathionine beta-synthase CLM98_19670 IPR000644 CBS domain CLM98_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19690 IPR006321 Pilus retraction protein PilT CLM98_19690 IPR003593 AAA+ ATPase domain CLM98_19690 IPR001482 Type II/IV secretion system protein CLM98_19700 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_19700 IPR004046 Glutathione S-transferase, C-terminal CLM98_19700 IPR005955 Glutathione S-transferases, class Zeta CLM98_19700 IPR004045 Glutathione S-transferase, N-terminal CLM98_19700 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CLM98_19700 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CLM98_19700 IPR036249 Thioredoxin-like superfamily CLM98_19700 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_19700 IPR040079 Glutathione Transferase family CLM98_19715 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_19715 IPR028622 ATP-dependent RNA helicase RhlE CLM98_19715 IPR011545 DEAD/DEAH box helicase domain CLM98_19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19715 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLM98_19715 IPR014014 RNA helicase, DEAD-box type, Q motif CLM98_19715 IPR001650 Helicase, C-terminal CLM98_19725 IPR010917 TonB-dependent receptor, conserved site CLM98_19725 IPR010916 TonB box, conserved site CLM98_19725 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_19725 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_19725 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_19725 IPR012910 TonB-dependent receptor, plug domain CLM98_19725 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_19725 IPR039426 Vitamin B12 transporter BtuB-like CLM98_19735 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CLM98_19735 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CLM98_19745 IPR004472 Dethiobiotin synthase BioD CLM98_19745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19750 IPR000614 Free Met sulfoxide reductase conserved site CLM98_19750 IPR003018 GAF domain CLM98_19750 IPR029016 GAF-like domain superfamily CLM98_19760 IPR029058 Alpha/Beta hydrolase fold CLM98_19760 IPR000801 Putative esterase CLM98_19765 IPR012910 TonB-dependent receptor, plug domain CLM98_19765 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_19765 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_19765 IPR010105 TonB-dependent siderophore receptor CLM98_19765 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_19765 IPR010917 TonB-dependent receptor, conserved site CLM98_19765 IPR039426 Vitamin B12 transporter BtuB-like CLM98_19770 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLM98_19770 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLM98_19770 IPR036412 HAD-like superfamily CLM98_19770 IPR006439 HAD hydrolase, subfamily IA CLM98_19770 IPR041492 Haloacid dehalogenase-like hydrolase CLM98_19770 IPR023214 HAD superfamily CLM98_19770 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLM98_19775 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CLM98_19775 IPR017961 DNA polymerase, Y-family, little finger domain CLM98_19775 IPR001126 UmuC domain CLM98_19775 IPR022880 DNA polymerase IV CLM98_19780 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_19780 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CLM98_19780 IPR029069 HotDog domain superfamily CLM98_19785 IPR016039 Thiolase-like CLM98_19785 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_19785 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_19785 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_19785 IPR018201 Beta-ketoacyl synthase, active site CLM98_19785 IPR000794 Beta-ketoacyl synthase CLM98_19795 IPR001567 Peptidase M3A/M3B catalytic domain CLM98_19795 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_19810 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_19810 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_19810 IPR034279 Copper resistance protein, third cupredoxin domain CLM98_19810 IPR034282 Copper resistance protein CopA, second cupredoxin domain CLM98_19810 IPR002355 Multicopper oxidase, copper-binding site CLM98_19810 IPR033138 Multicopper oxidases, conserved site CLM98_19810 IPR006376 Copper-resistance protein CopA CLM98_19810 IPR011707 Multicopper oxidase, type 3 CLM98_19810 IPR011706 Multicopper oxidase, type 2 CLM98_19810 IPR001117 Multicopper oxidase, type 1 CLM98_19810 IPR034284 Copper resistance protein, first cupredoxin domain CLM98_19810 IPR008972 Cupredoxin CLM98_19815 IPR007939 Copper resistance B precursor CLM98_19820 IPR004361 Glyoxalase I CLM98_19820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_19820 IPR018146 Glyoxalase I, conserved site CLM98_19820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_19820 IPR037523 Vicinal oxygen chelate (VOC) domain CLM98_19850 IPR017932 Glutamine amidotransferase type 2 domain CLM98_19850 IPR035490 GlmS/FrlB, SIS domain 2 CLM98_19850 IPR001347 Sugar isomerase (SIS) CLM98_19850 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CLM98_19850 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_19850 IPR035466 GlmS/AgaS, SIS domain 1 CLM98_19855 IPR006143 RND efflux pump, membrane fusion protein CLM98_19855 IPR030190 Macrolide export protein MacA CLM98_19855 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_19860 IPR017911 ABC transporter, macrolide export, ATP-binding domain CLM98_19860 IPR025857 MacB-like periplasmic core domain CLM98_19860 IPR017871 ABC transporter, conserved site CLM98_19860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19860 IPR003593 AAA+ ATPase domain CLM98_19860 IPR003838 ABC transporter permease protein domain CLM98_19860 IPR003439 ABC transporter-like CLM98_19865 IPR003838 ABC transporter permease protein domain CLM98_19865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19865 IPR025857 MacB-like periplasmic core domain CLM98_19865 IPR017911 ABC transporter, macrolide export, ATP-binding domain CLM98_19865 IPR017871 ABC transporter, conserved site CLM98_19865 IPR003593 AAA+ ATPase domain CLM98_19865 IPR003439 ABC transporter-like CLM98_19870 IPR003838 ABC transporter permease protein domain CLM98_19870 IPR005085 Carbohydrate binding module family 25 CLM98_19870 IPR025857 MacB-like periplasmic core domain CLM98_19885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_19885 IPR029151 Periplasmic sensor-like domain superfamily CLM98_19885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_19885 IPR005467 Histidine kinase domain CLM98_19885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_19885 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_19885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_19890 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CLM98_19890 IPR038009 GlmU, C-terminal LbH domain CLM98_19890 IPR001451 Hexapeptide repeat CLM98_19890 IPR018357 Hexapeptide transferase, conserved site CLM98_19890 IPR025877 MobA-like NTP transferase CLM98_19890 IPR011004 Trimeric LpxA-like superfamily CLM98_19890 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19905 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CLM98_19905 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CLM98_19905 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CLM98_19905 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CLM98_19905 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CLM98_19910 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CLM98_19910 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19910 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_19910 IPR003593 AAA+ ATPase domain CLM98_19910 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CLM98_19910 IPR005722 ATP synthase, F1 complex, beta subunit CLM98_19910 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CLM98_19915 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CLM98_19915 IPR000131 ATP synthase, F1 complex, gamma subunit CLM98_19915 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CLM98_19920 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_19920 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CLM98_19920 IPR000793 ATP synthase, alpha subunit, C-terminal CLM98_19920 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CLM98_19920 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CLM98_19920 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CLM98_19920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19920 IPR005294 ATP synthase, F1 complex, alpha subunit CLM98_19920 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CLM98_19920 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_19925 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CLM98_19925 IPR000711 ATPase, OSCP/delta subunit CLM98_19930 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CLM98_19930 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CLM98_19930 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CLM98_19935 IPR000454 ATP synthase, F0 complex, subunit C CLM98_19935 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CLM98_19935 IPR035921 F/V-ATP synthase subunit C superfamily CLM98_19935 IPR002379 V-ATPase proteolipid subunit C-like domain CLM98_19935 IPR038662 F1F0 ATP synthase subunit C superfamily CLM98_19935 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CLM98_19940 IPR023011 ATP synthase, F0 complex, subunit A, active site CLM98_19940 IPR035908 ATP synthase, F0 complex, subunit A superfamily CLM98_19940 IPR000568 ATP synthase, F0 complex, subunit A CLM98_19960 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_19960 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLM98_19960 IPR006258 Dihydrolipoamide dehydrogenase CLM98_19960 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLM98_19960 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_19960 IPR023753 FAD/NAD(P)-binding domain CLM98_19960 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_19970 IPR000089 Biotin/lipoyl attachment CLM98_19970 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_19970 IPR036625 E3-binding domain superfamily CLM98_19970 IPR011053 Single hybrid motif CLM98_19970 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_19970 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CLM98_19970 IPR004167 Peripheral subunit-binding domain CLM98_19970 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_20005 IPR004872 Lipoprotein NlpA family CLM98_20010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLM98_20010 IPR035906 MetI-like superfamily CLM98_20015 IPR017871 ABC transporter, conserved site CLM98_20015 IPR003439 ABC transporter-like CLM98_20015 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CLM98_20015 IPR026253 Methionine import ATP-binding protein MetN CLM98_20015 IPR018449 NIL domain CLM98_20015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20015 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CLM98_20015 IPR003593 AAA+ ATPase domain CLM98_20020 IPR000620 EamA domain CLM98_20025 IPR036183 YajQ-like superfamily CLM98_20025 IPR035570 UPF0234, N-terminal CLM98_20025 IPR035571 UPF0234-like, C-terminal CLM98_20025 IPR007551 Protein of unknown function DUF520 CLM98_20035 IPR000700 PAS-associated, C-terminal CLM98_20035 IPR013767 PAS fold CLM98_20035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_20035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_20035 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CLM98_20035 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CLM98_20035 IPR001789 Signal transduction response regulator, receiver domain CLM98_20035 IPR000014 PAS domain CLM98_20035 IPR011006 CheY-like superfamily CLM98_20035 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_20035 IPR036641 HPT domain superfamily CLM98_20035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_20035 IPR005467 Histidine kinase domain CLM98_20035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_20035 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_20035 IPR040642 Histidine kinase receptor ArcB, transmembrane domain CLM98_20035 IPR035965 PAS domain superfamily CLM98_20050 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20050 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_20050 IPR036291 NAD(P)-binding domain superfamily CLM98_20055 IPR006439 HAD hydrolase, subfamily IA CLM98_20055 IPR041492 Haloacid dehalogenase-like hydrolase CLM98_20055 IPR023214 HAD superfamily CLM98_20055 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLM98_20055 IPR036412 HAD-like superfamily CLM98_20060 IPR036986 RNA-binding S4 domain superfamily CLM98_20060 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_20060 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_20060 IPR002942 RNA-binding S4 domain CLM98_20060 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLM98_20060 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLM98_20060 IPR006145 Pseudouridine synthase, RsuA/RluA CLM98_20065 IPR007848 Methyltransferase small domain CLM98_20065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_20065 IPR023543 rRNA small subunit methyltransferase C CLM98_20065 IPR013675 Methyltransferase small, N-terminal CLM98_20065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_20075 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_20075 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_20075 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_20085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_20085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_20085 IPR000014 PAS domain CLM98_20085 IPR013767 PAS fold CLM98_20085 IPR035965 PAS domain superfamily CLM98_20085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_20085 IPR005467 Histidine kinase domain CLM98_20085 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_20085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_20105 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CLM98_20105 IPR001608 Alanine racemase, N-terminal CLM98_20105 IPR011079 Alanine racemase, C-terminal CLM98_20105 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_20105 IPR000821 Alanine racemase CLM98_20105 IPR029066 PLP-binding barrel CLM98_20110 IPR006076 FAD dependent oxidoreductase CLM98_20110 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_20110 IPR023080 D-amino acid dehydrogenase DadA CLM98_20115 IPR000485 AsnC-type HTH domain CLM98_20115 IPR011991 ArsR-like helix-turn-helix domain CLM98_20115 IPR019888 Transcription regulator AsnC-type CLM98_20115 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLM98_20115 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLM98_20115 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20115 IPR036390 Winged helix DNA-binding domain superfamily CLM98_20115 IPR011008 Dimeric alpha-beta barrel CLM98_20125 IPR028427 Peptide methionine sulfoxide reductase CLM98_20125 IPR002579 Peptide methionine sulphoxide reductase MrsB CLM98_20125 IPR011057 Mss4-like superfamily CLM98_20135 IPR002898 MotA/TolQ/ExbB proton channel CLM98_20135 IPR022522 Flagellar motor stator, MotA CLM98_20135 IPR000540 Flagellar motor protein MotA, conserved site CLM98_20140 IPR025713 Motility protein B, N-terminal domain CLM98_20140 IPR006665 OmpA-like domain CLM98_20140 IPR036737 OmpA-like domain superfamily CLM98_20170 IPR013525 ABC-2 type transporter CLM98_20170 IPR000412 ABC-2 transporter CLM98_20175 IPR003593 AAA+ ATPase domain CLM98_20175 IPR003439 ABC transporter-like CLM98_20175 IPR017871 ABC transporter, conserved site CLM98_20175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20180 IPR006153 Cation/H+ exchanger CLM98_20180 IPR018422 Cation/H+ exchanger, CPA1 family CLM98_20180 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CLM98_20180 IPR038770 Sodium/solute symporter superfamily CLM98_20190 IPR000782 FAS1 domain CLM98_20190 IPR036378 FAS1 domain superfamily CLM98_20195 IPR005122 Uracil-DNA glycosylase-like CLM98_20195 IPR005273 Uracil-DNA glycosylase family 4 CLM98_20195 IPR036895 Uracil-DNA glycosylase-like domain superfamily CLM98_20205 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLM98_20205 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CLM98_20215 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20215 IPR000847 Transcription regulator HTH, LysR CLM98_20215 IPR036390 Winged helix DNA-binding domain superfamily CLM98_20215 IPR005119 LysR, substrate-binding CLM98_20220 IPR029039 Flavoprotein-like superfamily CLM98_20220 IPR008254 Flavodoxin/nitric oxide synthase CLM98_20220 IPR005025 NADPH-dependent FMN reductase-like CLM98_20225 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_20225 IPR023210 NADP-dependent oxidoreductase domain CLM98_20225 IPR020471 Aldo/keto reductase CLM98_20260 IPR002293 Amino acid/polyamine transporter I CLM98_20270 IPR011006 CheY-like superfamily CLM98_20270 IPR001789 Signal transduction response regulator, receiver domain CLM98_20270 IPR007492 LytTR DNA-binding domain CLM98_20275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_20275 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_20275 IPR003660 HAMP domain CLM98_20275 IPR033479 Double Cache domain 1 CLM98_20275 IPR005467 Histidine kinase domain CLM98_20275 IPR010559 Signal transduction histidine kinase, internal region CLM98_20275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_20300 IPR010287 Domain of unknown function DUF892 CLM98_20300 IPR009078 Ferritin-like superfamily CLM98_20300 IPR012347 Ferritin-like CLM98_20305 IPR027407 Manganese catalase, C-terminal CLM98_20305 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain CLM98_20305 IPR007760 Manganese catalase CLM98_20305 IPR012347 Ferritin-like CLM98_20305 IPR009078 Ferritin-like superfamily CLM98_20325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_20325 IPR035909 Methylesterase CheB, C-terminal CLM98_20325 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_20325 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLM98_20325 IPR000014 PAS domain CLM98_20325 IPR035965 PAS domain superfamily CLM98_20325 IPR013656 PAS fold-4 CLM98_20325 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_20325 IPR000780 MCP methyltransferase, CheR-type CLM98_20340 IPR025944 Sigma-54 interaction domain, conserved site CLM98_20340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_20340 IPR009057 Homeobox-like domain superfamily CLM98_20340 IPR002197 DNA binding HTH domain, Fis-type CLM98_20340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20340 IPR003593 AAA+ ATPase domain CLM98_20340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_20340 IPR001789 Signal transduction response regulator, receiver domain CLM98_20340 IPR011006 CheY-like superfamily CLM98_20340 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_20355 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CLM98_20360 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CLM98_20375 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_20375 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20375 IPR036291 NAD(P)-binding domain superfamily CLM98_20380 IPR005886 UDP-glucose 4-epimerase CLM98_20380 IPR016040 NAD(P)-binding domain CLM98_20380 IPR036291 NAD(P)-binding domain superfamily CLM98_20390 IPR004379 UDP-galactopyranose mutase CLM98_20390 IPR015899 UDP-galactopyranose mutase, C-terminal CLM98_20400 IPR011527 ABC transporter type 1, transmembrane domain CLM98_20400 IPR003593 AAA+ ATPase domain CLM98_20400 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLM98_20400 IPR017871 ABC transporter, conserved site CLM98_20400 IPR039421 Type I protein exporter CLM98_20400 IPR003439 ABC transporter-like CLM98_20400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20415 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_20415 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_20415 IPR027399 Alcohol dehydrogenase GroES-associated CLM98_20415 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_20415 IPR036291 NAD(P)-binding domain superfamily CLM98_20415 IPR011032 GroES-like superfamily CLM98_20460 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_20460 IPR010105 TonB-dependent siderophore receptor CLM98_20460 IPR039423 TonB-dependent receptor-like CLM98_20460 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_20460 IPR012910 TonB-dependent receptor, plug domain CLM98_20460 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_20475 IPR003593 AAA+ ATPase domain CLM98_20475 IPR003439 ABC transporter-like CLM98_20475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20475 IPR017871 ABC transporter, conserved site CLM98_20485 IPR036390 Winged helix DNA-binding domain superfamily CLM98_20485 IPR005119 LysR, substrate-binding CLM98_20485 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20485 IPR000847 Transcription regulator HTH, LysR CLM98_20490 IPR038743 YjgH-like CLM98_20490 IPR006175 YjgF/YER057c/UK114 family CLM98_20490 IPR035959 RutC-like superfamily CLM98_20515 IPR003660 HAMP domain CLM98_20515 IPR004090 Chemotaxis methyl-accepting receptor CLM98_20515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_20535 IPR003680 Flavodoxin-like fold CLM98_20535 IPR029039 Flavoprotein-like superfamily CLM98_20535 IPR023048 NADH-azoreductase, FMN-dependent CLM98_20580 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_20580 IPR000994 Peptidase M24 CLM98_20580 IPR036005 Creatinase/aminopeptidase-like CLM98_20580 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLM98_20610 IPR000943 RNA polymerase sigma-70 CLM98_20610 IPR007624 RNA polymerase sigma-70 region 3 CLM98_20610 IPR007631 RNA polymerase sigma factor 70, non-essential domain CLM98_20610 IPR007127 RNA polymerase sigma factor 70, region 1.1 CLM98_20610 IPR042189 Sigma-70 factor, region 1.1 superfamily CLM98_20610 IPR009042 RNA polymerase sigma-70 region 1.2 CLM98_20610 IPR014284 RNA polymerase sigma-70 like domain CLM98_20610 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_20610 IPR013325 RNA polymerase sigma factor, region 2 CLM98_20610 IPR028630 RNA polymerase sigma factor RpoD CLM98_20610 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20610 IPR007630 RNA polymerase sigma-70 region 4 CLM98_20610 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CLM98_20610 IPR007627 RNA polymerase sigma-70 region 2 CLM98_20615 IPR003732 D-aminoacyl-tRNA deacylase DTD CLM98_20615 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CLM98_20620 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CLM98_20620 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP CLM98_20620 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLM98_20630 IPR016181 Acyl-CoA N-acyltransferase CLM98_20630 IPR000182 GNAT domain CLM98_20640 IPR000926 GTP cyclohydrolase II, RibA CLM98_20640 IPR036144 RibA-like superfamily CLM98_20640 IPR032677 GTP cyclohydrolase II CLM98_20660 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_20660 IPR001173 Glycosyltransferase 2-like CLM98_20675 IPR004573 rRNA small subunit methyltransferase B CLM98_20675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_20675 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CLM98_20675 IPR035926 NusB-like superfamily CLM98_20675 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CLM98_20675 IPR006027 NusB/RsmB/TIM44 CLM98_20675 IPR023267 RNA (C5-cytosine) methyltransferase CLM98_20680 IPR036477 Formyl transferase, N-terminal domain superfamily CLM98_20680 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLM98_20680 IPR002376 Formyl transferase, N-terminal CLM98_20680 IPR011034 Formyl transferase-like, C-terminal domain superfamily CLM98_20680 IPR005793 Formyl transferase, C-terminal CLM98_20680 IPR005794 Methionyl-tRNA formyltransferase CLM98_20680 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CLM98_20680 IPR037022 Formyl transferase, C-terminal domain superfamily CLM98_20685 IPR036821 Peptide deformylase superfamily CLM98_20685 IPR023635 Peptide deformylase CLM98_20690 IPR018392 LysM domain CLM98_20690 IPR036779 LysM domain superfamily CLM98_20695 IPR041614 DprA, winged helix domain CLM98_20695 IPR003488 DNA recombination-mediator protein A CLM98_20695 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20700 IPR007456 Smg CLM98_20705 IPR012902 Prokaryotic N-terminal methylation site CLM98_20705 IPR001082 Fimbrial protein pilin CLM98_20715 IPR003601 DNA topoisomerase, type IA, domain 2 CLM98_20715 IPR000380 DNA topoisomerase, type IA CLM98_20715 IPR028612 DNA topoisomerase I, type IA CLM98_20715 IPR023405 DNA topoisomerase, type IA, core domain CLM98_20715 IPR034149 DNA topoisomerase 1, TOPRIM domain CLM98_20715 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLM98_20715 IPR005733 DNA topoisomerase I, bacterial-type CLM98_20715 IPR006171 TOPRIM domain CLM98_20715 IPR023406 DNA topoisomerase, type IA, active site CLM98_20715 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLM98_20715 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLM98_20715 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLM98_20715 IPR013497 DNA topoisomerase, type IA, central CLM98_20715 IPR025589 Topoisomerase C-terminal repeat CLM98_20720 IPR023535 Threonylcarbamoyl-AMP synthase CLM98_20720 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLM98_20720 IPR006070 YrdC-like domain CLM98_20735 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20735 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_20735 IPR036291 NAD(P)-binding domain superfamily CLM98_20745 IPR004635 Peptidase S49, SppA CLM98_20745 IPR004634 Peptidase S49, protease IV CLM98_20745 IPR029045 ClpP/crotonase-like domain superfamily CLM98_20745 IPR033854 Signal peptide peptidase A CLM98_20745 IPR002142 Peptidase S49 CLM98_20750 IPR002528 Multi antimicrobial extrusion protein CLM98_20770 IPR041236 Primosomal protein N, C-terminal domain CLM98_20770 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CLM98_20770 IPR041222 Primosomal protein N', 3' DNA-binding domain CLM98_20770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20770 IPR001650 Helicase, C-terminal CLM98_20770 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CLM98_20770 IPR005259 Primosomal protein N' CLM98_20770 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_20770 IPR011545 DEAD/DEAH box helicase domain CLM98_20775 IPR004046 Glutathione S-transferase, C-terminal CLM98_20775 IPR004045 Glutathione S-transferase, N-terminal CLM98_20775 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_20775 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_20775 IPR036249 Thioredoxin-like superfamily CLM98_20790 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_20790 IPR023753 FAD/NAD(P)-binding domain CLM98_20795 IPR005115 Uncharacterised domain UPF0126 CLM98_20800 IPR014284 RNA polymerase sigma-70 like domain CLM98_20800 IPR007627 RNA polymerase sigma-70 region 2 CLM98_20800 IPR000943 RNA polymerase sigma-70 CLM98_20800 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_20800 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CLM98_20800 IPR007630 RNA polymerase sigma-70 region 4 CLM98_20800 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20800 IPR013325 RNA polymerase sigma factor, region 2 CLM98_20805 IPR002043 Uracil-DNA glycosylase family 1 CLM98_20805 IPR018085 Uracil-DNA glycosylase, active site CLM98_20805 IPR005122 Uracil-DNA glycosylase-like CLM98_20805 IPR036895 Uracil-DNA glycosylase-like domain superfamily CLM98_20810 IPR011006 CheY-like superfamily CLM98_20810 IPR001789 Signal transduction response regulator, receiver domain CLM98_20810 IPR037522 HD-GYP domain CLM98_20810 IPR003607 HD/PDEase domain CLM98_20815 IPR004513 Cell division protein FtsX CLM98_20815 IPR040690 FtsX, extracellular domain CLM98_20820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20820 IPR005286 Cell division protein FtsE, ATP-binding CLM98_20820 IPR017871 ABC transporter, conserved site CLM98_20820 IPR003593 AAA+ ATPase domain CLM98_20820 IPR003439 ABC transporter-like CLM98_20825 IPR023554 ATP-dependent RNA helicase RhlB type CLM98_20825 IPR014014 RNA helicase, DEAD-box type, Q motif CLM98_20825 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLM98_20825 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_20825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20825 IPR011545 DEAD/DEAH box helicase domain CLM98_20825 IPR001650 Helicase, C-terminal CLM98_20825 IPR022077 ATP-dependent RNA helicase RhlB CLM98_20830 IPR005746 Thioredoxin CLM98_20830 IPR036249 Thioredoxin-like superfamily CLM98_20830 IPR017937 Thioredoxin, conserved site CLM98_20830 IPR013766 Thioredoxin domain CLM98_20835 IPR011113 Rho termination factor, RNA-binding domain CLM98_20835 IPR011112 Rho termination factor, N-terminal CLM98_20835 IPR041703 Transcription termination factor Rho, ATP binding domain CLM98_20835 IPR011129 Cold shock domain CLM98_20835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_20835 IPR004665 Transcription termination factor Rho CLM98_20835 IPR003593 AAA+ ATPase domain CLM98_20835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20835 IPR012340 Nucleic acid-binding, OB-fold CLM98_20850 IPR010452 Isocitrate dehydrogenase kinasephosphatase CLM98_20855 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_20855 IPR005119 LysR, substrate-binding CLM98_20855 IPR000847 Transcription regulator HTH, LysR CLM98_20855 IPR036390 Winged helix DNA-binding domain superfamily CLM98_20865 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CLM98_20880 IPR013422 CRISPR-associated protein Cas5, N-terminal CLM98_20880 IPR021124 CRISPR-associated protein, Cas5 CLM98_20880 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d CLM98_20900 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain CLM98_20900 IPR019856 CRISPR-associated protein Cas1, DVULG subtype CLM98_20900 IPR002729 CRISPR-associated protein Cas1 CLM98_20900 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain CLM98_20905 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CLM98_20905 IPR021127 CRISPR-associated endonuclease Cas2 CLM98_20915 IPR036779 LysM domain superfamily CLM98_20915 IPR007055 BON domain CLM98_20915 IPR014004 Transport-associated and nodulation domain, bacteria CLM98_20915 IPR018392 LysM domain CLM98_20920 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CLM98_20920 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CLM98_20920 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CLM98_20925 IPR017439 Amidohydrolase CLM98_20925 IPR002933 Peptidase M20 CLM98_20925 IPR036264 Bacterial exopeptidase dimerisation domain CLM98_20925 IPR011650 Peptidase M20, dimerisation domain CLM98_20930 IPR006143 RND efflux pump, membrane fusion protein CLM98_20930 IPR022824 Multidrug resistance protein MdtA CLM98_20930 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_20935 IPR022831 Multidrug resistance protein MdtB CLM98_20935 IPR001036 Acriflavin resistance protein CLM98_20935 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_20940 IPR023931 Multidrug resistance protein MdtC CLM98_20940 IPR001036 Acriflavin resistance protein CLM98_20940 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_20945 IPR009770 Domain of unknown function DUF1338 CLM98_20995 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CLM98_20995 IPR000755 D-alanyl-D-alanine dipeptidase CLM98_21000 IPR036366 PGBD superfamily CLM98_21000 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLM98_21000 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CLM98_21000 IPR036365 PGBD-like superfamily CLM98_21010 IPR034603 Dipeptide epimerase CLM98_21010 IPR029017 Enolase-like, N-terminal CLM98_21010 IPR029065 Enolase C-terminal domain-like CLM98_21010 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_21010 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_21010 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_21010 IPR036849 Enolase-like, C-terminal domain superfamily CLM98_21020 IPR002293 Amino acid/polyamine transporter I CLM98_21020 IPR004754 Amino acid antiporter CLM98_21035 IPR038972 Inner membrane protein YiaA-like CLM98_21035 IPR008024 YiaAB two helix CLM98_21040 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_21040 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_21040 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_21045 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CLM98_21045 IPR026891 Fibronectin type III-like domain CLM98_21045 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_21045 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_21045 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_21045 IPR017853 Glycoside hydrolase superfamily CLM98_21045 IPR013783 Immunoglobulin-like fold CLM98_21045 IPR019800 Glycoside hydrolase, family 3, active site CLM98_21050 IPR006156 Dihydroneopterin aldolase CLM98_21050 IPR006157 Dihydroneopterin aldolase/epimerase domain CLM98_21055 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CLM98_21055 IPR017860 Peptidase M22, conserved site CLM98_21055 IPR017861 Kae1/TsaD family CLM98_21055 IPR000905 Gcp-like domain CLM98_21060 IPR038380 Ribosomal protein S21 superfamily CLM98_21060 IPR001911 Ribosomal protein S21 CLM98_21060 IPR018278 Ribosomal protein S21, conserved site CLM98_21065 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CLM98_21065 IPR019004 Uncharacterised protein YqeY/Aim41 CLM98_21065 IPR042184 YqeY/Aim41, N-terminal domain CLM98_21065 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CLM98_21075 IPR023679 Uncharacterised protein family UPF0761, bacterial CLM98_21075 IPR017039 Virulence factor BrkB CLM98_21080 IPR030846 DNA primase DnaG, bacteria CLM98_21080 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CLM98_21080 IPR036977 DNA Primase, CHC2-type zinc finger CLM98_21080 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLM98_21080 IPR013173 DNA primase DnaG, DnaB-binding domain CLM98_21080 IPR013264 DNA primase, catalytic core, N-terminal CLM98_21080 IPR034151 Bacterial DnaG primase, TOPRIM domain CLM98_21080 IPR019475 DNA primase, DnaB-helicase binding domain CLM98_21080 IPR006171 TOPRIM domain CLM98_21080 IPR002694 Zinc finger, CHC2-type CLM98_21080 IPR006295 DNA primase, DnaG CLM98_21085 IPR016833 Putative sodium bile acid cotransporter CLM98_21085 IPR038770 Sodium/solute symporter superfamily CLM98_21095 IPR000537 UbiA prenyltransferase family CLM98_21095 IPR030470 UbiA prenyltransferase conserved site CLM98_21095 IPR006369 Protohaem IX farnesyltransferase CLM98_21120 IPR000298 Cytochrome c oxidase subunit III-like CLM98_21120 IPR035973 Cytochrome c oxidase subunit III-like superfamily CLM98_21120 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CLM98_21120 IPR024791 Cytochrome c oxidase subunit III CLM98_21120 IPR033945 Cytochrome c oxidase subunit III domain CLM98_21125 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 CLM98_21125 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily CLM98_21135 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLM98_21135 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLM98_21135 IPR023616 Cytochrome c oxidase-like, subunit I domain CLM98_21135 IPR033944 Cytochrome c oxidase subunit I domain CLM98_21135 IPR014241 Cytochrome c oxidase, subunit I bacterial type CLM98_21135 IPR000883 Cytochrome c oxidase subunit I CLM98_21140 IPR001505 Copper centre Cu(A) CLM98_21140 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CLM98_21140 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CLM98_21140 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CLM98_21140 IPR034210 Cytochrome c oxidase subunit 2, C-terminal CLM98_21140 IPR005728 Rickettsial palindromic element CLM98_21140 IPR014222 Cytochrome c oxidase, subunit II CLM98_21140 IPR008972 Cupredoxin CLM98_21150 IPR013321 Arc-type ribbon-helix-helix CLM98_21150 IPR024082 Proline dehydrogenase PutA, domain II CLM98_21150 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_21150 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_21150 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_21150 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_21150 IPR015590 Aldehyde dehydrogenase domain CLM98_21150 IPR025703 Bifunctional protein PutA CLM98_21150 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CLM98_21150 IPR002872 Proline dehydrogenase domain CLM98_21150 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_21150 IPR010985 Ribbon-helix-helix CLM98_21150 IPR024090 Proline dehydrogenase PutA, domain I CLM98_21150 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CLM98_21150 IPR029041 FAD-linked oxidoreductase-like CLM98_21150 IPR024089 Proline dehydrogenase PutA, domain I/II CLM98_21185 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLM98_21185 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_21185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21185 IPR002307 Tyrosine-tRNA ligase CLM98_21185 IPR002942 RNA-binding S4 domain CLM98_21185 IPR036986 RNA-binding S4 domain superfamily CLM98_21185 IPR024088 Tyrosine-tRNA ligase, bacterial-type CLM98_21185 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CLM98_21190 IPR011055 Duplicated hybrid motif CLM98_21190 IPR007340 Opacity-associated protein A CLM98_21190 IPR016047 Peptidase M23 CLM98_21195 IPR005338 Anhydro-N-acetylmuramic acid kinase CLM98_21205 IPR020846 Major facilitator superfamily domain CLM98_21205 IPR011701 Major facilitator superfamily CLM98_21205 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CLM98_21205 IPR036259 MFS transporter superfamily CLM98_21210 IPR020847 AP endonuclease 1, binding site CLM98_21210 IPR020848 AP endonuclease 1, conserved site CLM98_21210 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_21210 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLM98_21210 IPR004808 AP endonuclease 1 CLM98_21215 IPR029057 Phosphoribosyltransferase-like CLM98_21215 IPR023031 Orotate phosphoribosyltransferase CLM98_21215 IPR000836 Phosphoribosyltransferase domain CLM98_21215 IPR004467 Orotate phosphoribosyl transferase domain CLM98_21225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21225 IPR025669 AAA domain CLM98_21230 IPR036086 ParB/Sulfiredoxin superfamily CLM98_21230 IPR003115 ParB/Sulfiredoxin CLM98_21230 IPR041468 ParB/Spo0J, HTH domain CLM98_21230 IPR004437 ParB/RepB/Spo0J partition protein CLM98_21245 IPR001509 NAD-dependent epimerase/dehydratase CLM98_21245 IPR036291 NAD(P)-binding domain superfamily CLM98_21250 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_21250 IPR001173 Glycosyltransferase 2-like CLM98_21265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_21265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_21265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_21265 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_21265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_21265 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CLM98_21265 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_21265 IPR016066 Alpha-D-phosphohexomutase, conserved site CLM98_21270 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CLM98_21270 IPR036157 dUTPase-like superfamily CLM98_21270 IPR029054 dUTPase-like CLM98_21270 IPR033704 dUTPase, trimeric CLM98_21275 IPR003382 Flavoprotein CLM98_21275 IPR035929 CoaB-like superfamily CLM98_21275 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CLM98_21275 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CLM98_21275 IPR036551 Flavin prenyltransferase-like CLM98_21280 IPR037518 MPN domain CLM98_21280 IPR025657 RadC-like JAB domain CLM98_21280 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_21280 IPR001405 Uncharacterised protein family UPF0758 CLM98_21280 IPR010994 RuvA domain 2-like CLM98_21285 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLM98_21285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21285 IPR008909 DALR anticodon binding CLM98_21285 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CLM98_21285 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_21285 IPR001278 Arginine-tRNA ligase CLM98_21285 IPR005148 Arginyl tRNA synthetase N-terminal domain CLM98_21285 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CLM98_21300 IPR036291 NAD(P)-binding domain superfamily CLM98_21300 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_21300 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_21305 IPR036514 SGNH hydrolase superfamily CLM98_21305 IPR002656 Acyltransferase 3 CLM98_21310 IPR004276 Glycosyltransferase family 28, N-terminal domain CLM98_21315 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_21315 IPR001031 Thioesterase CLM98_21315 IPR009081 Phosphopantetheine binding ACP domain CLM98_21315 IPR020802 Polyketide synthase, thioesterase domain CLM98_21315 IPR020845 AMP-binding, conserved site CLM98_21315 IPR001242 Condensation domain CLM98_21315 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_21315 IPR042099 AMP-dependent synthetase-like superfamily CLM98_21315 IPR000873 AMP-dependent synthetase/ligase CLM98_21315 IPR010071 Amino acid adenylation domain CLM98_21315 IPR036736 ACP-like superfamily CLM98_21315 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLM98_21315 IPR029058 Alpha/Beta hydrolase fold CLM98_21320 IPR041128 Arginine decarboxylase, C-terminal helical CLM98_21320 IPR029066 PLP-binding barrel CLM98_21320 IPR040634 Arginine decarboxylase, helical bundle domain CLM98_21320 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_21320 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLM98_21320 IPR000183 Ornithine/DAP/Arg decarboxylase CLM98_21320 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CLM98_21320 IPR002985 Arginine decarboxylase CLM98_21325 IPR030373 Polyamine biosynthesis domain, conserved site CLM98_21325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_21325 IPR001045 Spermidine/spermine synthases CLM98_21325 IPR035246 Spermidine synthase, tetramerisation domain CLM98_21325 IPR037163 Spermidine synthase, tetramerisation domain superfamily CLM98_21325 IPR030374 Polyamine biosynthesis domain CLM98_21355 IPR002187 Nitrogen regulatory protein PII CLM98_21355 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_21355 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_21355 IPR017918 Nitrogen regulatory protein PII, conserved site CLM98_21355 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLM98_21360 IPR007475 Ubiquinone biosynthesis accessory factor UbiK CLM98_21365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21365 IPR003593 AAA+ ATPase domain CLM98_21365 IPR004482 Mg chelatase-related protein CLM98_21365 IPR001208 MCM domain CLM98_21365 IPR025158 Mg chelatase-related protein, C-terminal domain CLM98_21365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_21365 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_21365 IPR000523 Magnesium chelatase ChlI domain CLM98_21380 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CLM98_21380 IPR001633 EAL domain CLM98_21380 IPR035919 EAL domain superfamily CLM98_21385 IPR005804 Fatty acid desaturase domain CLM98_21390 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLM98_21390 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21390 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_21390 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_21390 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_21390 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_21390 IPR012675 Beta-grasp domain superfamily CLM98_21390 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21390 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_21390 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_21395 IPR023764 Transcriptional repressor HTH, FabR CLM98_21395 IPR001647 DNA-binding HTH domain, TetR-type CLM98_21395 IPR009057 Homeobox-like domain superfamily CLM98_21420 IPR001233 tRNA-splicing ligase, RtcB CLM98_21420 IPR036025 tRNA-splicing ligase RtcB-like superfamily CLM98_21455 IPR001509 NAD-dependent epimerase/dehydratase CLM98_21455 IPR036291 NAD(P)-binding domain superfamily CLM98_21455 IPR010099 Epimerase family protein SDR39U1 CLM98_21455 IPR013549 Domain of unknown function DUF1731 CLM98_21460 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_21460 IPR001789 Signal transduction response regulator, receiver domain CLM98_21460 IPR011006 CheY-like superfamily CLM98_21460 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21460 IPR039420 Transcriptional regulatory protein WalR-like CLM98_21465 IPR013727 Two-component sensor kinase, N-terminal CLM98_21465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_21465 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_21465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_21465 IPR005467 Histidine kinase domain CLM98_21465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_21465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_21495 IPR001478 PDZ domain CLM98_21495 IPR036034 PDZ superfamily CLM98_21495 IPR001940 Peptidase S1C CLM98_21495 IPR009003 Peptidase S1, PA clan CLM98_21495 IPR011782 Peptidase S1C, Do CLM98_21515 IPR002549 Transmembrane protein TqsA-like CLM98_21520 IPR041492 Haloacid dehalogenase-like hydrolase CLM98_21520 IPR036412 HAD-like superfamily CLM98_21520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLM98_21520 IPR010972 Beta-phosphoglucomutase CLM98_21520 IPR023214 HAD superfamily CLM98_21520 IPR006439 HAD hydrolase, subfamily IA CLM98_21520 IPR010976 Beta-phosphoglucomutase hydrolase CLM98_21525 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CLM98_21525 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CLM98_21525 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CLM98_21525 IPR023042 Peptidase M17, leucine aminopeptidase CLM98_21535 IPR039425 RNA polymerase sigma-70 like CLM98_21535 IPR014284 RNA polymerase sigma-70 like domain CLM98_21535 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLM98_21535 IPR007627 RNA polymerase sigma-70 region 2 CLM98_21535 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_21535 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21535 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_21535 IPR013325 RNA polymerase sigma factor, region 2 CLM98_21540 IPR024168 Catalase, SrpA-type, predicted CLM98_21540 IPR020835 Catalase superfamily CLM98_21540 IPR018028 Catalase, mono-functional, haem-containing CLM98_21540 IPR011614 Catalase core domain CLM98_21555 IPR011006 CheY-like superfamily CLM98_21555 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21555 IPR000792 Transcription regulator LuxR, C-terminal CLM98_21555 IPR001789 Signal transduction response regulator, receiver domain CLM98_21555 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_21560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_21560 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_21565 IPR022824 Multidrug resistance protein MdtA CLM98_21565 IPR006143 RND efflux pump, membrane fusion protein CLM98_21565 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLM98_21570 IPR017871 ABC transporter, conserved site CLM98_21570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21570 IPR003593 AAA+ ATPase domain CLM98_21570 IPR003439 ABC transporter-like CLM98_21595 IPR000620 EamA domain CLM98_21595 IPR004779 Carboxylate/Amino Acid/Amine Transporter CLM98_21615 IPR001279 Metallo-beta-lactamase CLM98_21615 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLM98_21620 IPR024109 Tryptophan-tRNA ligase, bacterial-type CLM98_21620 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLM98_21620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21620 IPR036913 YegP-like superfamily CLM98_21620 IPR002306 Tryptophan-tRNA ligase CLM98_21625 IPR036629 YjbJ superfamily CLM98_21625 IPR026042 Stress response protein YjbJ CLM98_21625 IPR008462 CsbD-like domain CLM98_21640 IPR020855 Ureohydrolase, manganese-binding site CLM98_21640 IPR023696 Ureohydrolase domain superfamily CLM98_21640 IPR006035 Ureohydrolase CLM98_21640 IPR014033 Arginase CLM98_21670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21670 IPR039430 Thymidylate kinase-like domain CLM98_21670 IPR018094 Thymidylate kinase CLM98_21685 IPR004619 Type III pantothenate kinase CLM98_21690 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CLM98_21690 IPR003142 Biotin protein ligase, C-terminal CLM98_21690 IPR030855 Bifunctional ligase/repressor BirA CLM98_21690 IPR036390 Winged helix DNA-binding domain superfamily CLM98_21690 IPR004409 Biotin operon repressor, helix-turn-helix domain CLM98_21690 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21690 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CLM98_21690 IPR013196 Helix-turn-helix, type 11 CLM98_21690 IPR008988 Transcriptional repressor, C-terminal CLM98_21705 IPR024079 Metallopeptidase, catalytic domain superfamily CLM98_21705 IPR010384 MtfA family CLM98_21705 IPR042252 MtfA, N-terminal CLM98_21720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_21720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_21720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_21720 IPR005467 Histidine kinase domain CLM98_21720 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_21720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_21720 IPR003660 HAMP domain CLM98_21725 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21725 IPR039420 Transcriptional regulatory protein WalR-like CLM98_21725 IPR001789 Signal transduction response regulator, receiver domain CLM98_21725 IPR011006 CheY-like superfamily CLM98_21725 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_21735 IPR013785 Aldolase-type TIM barrel CLM98_21735 IPR018517 tRNA-dihydrouridine synthase, conserved site CLM98_21735 IPR001269 tRNA-dihydrouridine synthase CLM98_21735 IPR004653 tRNA-dihydrouridine(20/20a) synthase CLM98_21735 IPR035587 DUS-like, FMN-binding domain CLM98_21765 IPR039000 ATP-dependent DNA helicase DinG CLM98_21765 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CLM98_21765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21765 IPR001650 Helicase, C-terminal CLM98_21765 IPR006555 ATP-dependent helicase, C-terminal CLM98_21765 IPR010614 DEAD2 CLM98_21780 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLM98_21780 IPR022893 Shikimate dehydrogenase family CLM98_21780 IPR036291 NAD(P)-binding domain superfamily CLM98_21780 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CLM98_21780 IPR011342 Shikimate dehydrogenase CLM98_21780 IPR041121 SDH, C-terminal CLM98_21790 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21790 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21790 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CLM98_21790 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_21790 IPR029039 Flavoprotein-like superfamily CLM98_21790 IPR008254 Flavodoxin/nitric oxide synthase CLM98_21790 IPR001094 Flavodoxin-like CLM98_21790 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CLM98_21790 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CLM98_21790 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CLM98_21790 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_21790 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_21800 IPR005119 LysR, substrate-binding CLM98_21800 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_21800 IPR036390 Winged helix DNA-binding domain superfamily CLM98_21800 IPR000847 Transcription regulator HTH, LysR CLM98_21815 IPR001731 Delta-aminolevulinic acid dehydratase CLM98_21815 IPR030656 Delta-aminolevulinic acid dehydratase, active site CLM98_21815 IPR013785 Aldolase-type TIM barrel CLM98_21840 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily CLM98_21840 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_21840 IPR029058 Alpha/Beta hydrolase fold CLM98_21840 IPR002469 Dipeptidylpeptidase IV, N-terminal domain CLM98_21845 IPR010987 Glutathione S-transferase, C-terminal-like CLM98_21845 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLM98_21845 IPR004045 Glutathione S-transferase, N-terminal CLM98_21845 IPR004046 Glutathione S-transferase, C-terminal CLM98_21845 IPR036249 Thioredoxin-like superfamily CLM98_21870 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_21870 IPR006905 Flavin-dependent halogenase CLM98_21870 IPR033856 Flavin-dependent tryptophan halogenase CLM98_21885 IPR003439 ABC transporter-like CLM98_21885 IPR003593 AAA+ ATPase domain CLM98_21885 IPR017871 ABC transporter, conserved site CLM98_21885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21895 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_21895 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_21905 IPR000514 Glycoside hydrolase, family 39 CLM98_21905 IPR017853 Glycoside hydrolase superfamily CLM98_21910 IPR003735 Metal-sensitive transcriptional repressor CLM98_21910 IPR038390 Metal-sensitive transcriptional repressor superfamily CLM98_21915 IPR027469 Cation efflux transmembrane domain superfamily CLM98_21915 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CLM98_21915 IPR027470 Cation efflux protein, cytoplasmic domain CLM98_21915 IPR002524 Cation efflux protein CLM98_21925 IPR039423 TonB-dependent receptor-like CLM98_21925 IPR000531 TonB-dependent receptor-like, beta-barrel CLM98_21925 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLM98_21925 IPR010105 TonB-dependent siderophore receptor CLM98_21925 IPR012910 TonB-dependent receptor, plug domain CLM98_21925 IPR037066 TonB-dependent receptor, plug domain superfamily CLM98_21935 IPR018062 HTH domain AraC-type, conserved site CLM98_21935 IPR002818 DJ-1/PfpI CLM98_21935 IPR009057 Homeobox-like domain superfamily CLM98_21935 IPR018060 DNA binding HTH domain, AraC-type CLM98_21935 IPR029062 Class I glutamine amidotransferase-like CLM98_21940 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLM98_21940 IPR012675 Beta-grasp domain superfamily CLM98_21940 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_21940 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLM98_21940 IPR036010 2Fe-2S ferredoxin-like superfamily CLM98_21940 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLM98_21940 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21940 IPR017927 FAD-binding domain, ferredoxin reductase-type CLM98_21940 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_21940 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21945 IPR017871 ABC transporter, conserved site CLM98_21945 IPR003439 ABC transporter-like CLM98_21945 IPR003593 AAA+ ATPase domain CLM98_21945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21950 IPR000412 ABC-2 transporter CLM98_21950 IPR013525 ABC-2 type transporter CLM98_21960 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_21960 IPR003710 Ketopantoate reductase ApbA/PanE CLM98_21960 IPR013752 Ketopantoate reductase, C-terminal domain CLM98_21960 IPR013332 Ketopantoate reductase, N-terminal domain CLM98_21960 IPR036291 NAD(P)-binding domain superfamily CLM98_21960 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_21995 IPR009078 Ferritin-like superfamily CLM98_21995 IPR012348 Ribonucleotide reductase-like CLM98_21995 IPR033909 Ribonucleotide reductase small subunit CLM98_21995 IPR000358 Ribonucleotide reductase small subunit family CLM98_22005 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CLM98_22005 IPR005144 ATP-cone domain CLM98_22005 IPR013346 Ribonucleotide reductase, class I , alpha subunit CLM98_22005 IPR000788 Ribonucleotide reductase large subunit, C-terminal CLM98_22005 IPR013509 Ribonucleotide reductase large subunit, N-terminal CLM98_22005 IPR039718 Ribonucleoside-diphosphate reductase large subunit CLM98_22025 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CLM98_22025 IPR036291 NAD(P)-binding domain superfamily CLM98_22025 IPR000182 GNAT domain CLM98_22025 IPR003781 CoA-binding CLM98_22025 IPR016181 Acyl-CoA N-acyltransferase CLM98_22025 IPR016102 Succinyl-CoA synthetase-like CLM98_22025 IPR013815 ATP-grasp fold, subdomain 1 CLM98_22025 IPR011761 ATP-grasp fold CLM98_22030 IPR038076 MgtE, N-terminal domain superfamily CLM98_22030 IPR038048 Magnesium transporter MgtE, transmembrane domain CLM98_22030 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CLM98_22030 IPR006668 Magnesium transporter, MgtE intracellular domain CLM98_22030 IPR000644 CBS domain CLM98_22030 IPR006669 Magnesium transporter MgtE CLM98_22030 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLM98_22045 IPR006153 Cation/H+ exchanger CLM98_22045 IPR004771 K+/H+ exchanger CLM98_22045 IPR003148 Regulator of K+ conductance, N-terminal CLM98_22045 IPR036291 NAD(P)-binding domain superfamily CLM98_22045 IPR038770 Sodium/solute symporter superfamily CLM98_22045 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CLM98_22050 IPR019796 Glucose-6-phosphate dehydrogenase, active site CLM98_22050 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CLM98_22050 IPR036291 NAD(P)-binding domain superfamily CLM98_22050 IPR001282 Glucose-6-phosphate dehydrogenase CLM98_22050 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CLM98_22055 IPR008928 Six-hairpin glycosidase superfamily CLM98_22055 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_22055 IPR011613 GH15-like domain CLM98_22070 IPR027354 YcgL domain CLM98_22070 IPR038068 YcgL-like superfamily CLM98_22075 IPR018201 Beta-ketoacyl synthase, active site CLM98_22075 IPR016039 Thiolase-like CLM98_22075 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_22075 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CLM98_22075 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_22075 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_22075 IPR000794 Beta-ketoacyl synthase CLM98_22085 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_22085 IPR001173 Glycosyltransferase 2-like CLM98_22085 IPR039528 DPM1-like CLM98_22105 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_22105 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_22105 IPR036291 NAD(P)-binding domain superfamily CLM98_22105 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_22140 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_22140 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CLM98_22140 IPR029069 HotDog domain superfamily CLM98_22145 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CLM98_22145 IPR002123 Phospholipid/glycerol acyltransferase CLM98_22155 IPR003231 Acyl carrier protein (ACP) CLM98_22155 IPR036736 ACP-like superfamily CLM98_22155 IPR006162 Phosphopantetheine attachment site CLM98_22155 IPR009081 Phosphopantetheine binding ACP domain CLM98_22160 IPR006905 Flavin-dependent halogenase CLM98_22160 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_22165 IPR031038 Chorismatase, FkbO/Hyg5 family CLM98_22165 IPR035959 RutC-like superfamily CLM98_22185 IPR011659 WD40-like Beta Propeller CLM98_22185 IPR029058 Alpha/Beta hydrolase fold CLM98_22185 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_22185 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_22205 IPR018375 Coproporphyrinogen III oxidase, conserved site CLM98_22205 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CLM98_22205 IPR001260 Coproporphyrinogen III oxidase, aerobic CLM98_22215 IPR002562 3'-5' exonuclease domain CLM98_22215 IPR002421 5'-3' exonuclease, N-terminal CLM98_22215 IPR019760 DNA-directed DNA polymerase, family A, conserved site CLM98_22215 IPR036397 Ribonuclease H superfamily CLM98_22215 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CLM98_22215 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLM98_22215 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLM98_22215 IPR012337 Ribonuclease H-like superfamily CLM98_22215 IPR029060 PIN-like domain superfamily CLM98_22215 IPR020045 DNA polymerase I-like, H3TH domain CLM98_22215 IPR018320 DNA polymerase 1 CLM98_22215 IPR008918 Helix-hairpin-helix motif, class 2 CLM98_22215 IPR002298 DNA polymerase A CLM98_22245 IPR008271 Serine/threonine-protein kinase, active site CLM98_22245 IPR017441 Protein kinase, ATP binding site CLM98_22245 IPR005543 PASTA domain CLM98_22245 IPR011009 Protein kinase-like domain superfamily CLM98_22245 IPR000719 Protein kinase domain CLM98_22250 IPR036457 PPM-type phosphatase domain superfamily CLM98_22250 IPR015655 Protein phosphatase 2C family CLM98_22250 IPR001932 PPM-type phosphatase domain CLM98_22285 IPR006531 Gp5 N-terminal CLM98_22285 IPR037026 Vgr protein, OB-fold domain superfamily CLM98_22285 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CLM98_22285 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CLM98_22300 IPR005543 PASTA domain CLM98_22300 IPR008271 Serine/threonine-protein kinase, active site CLM98_22300 IPR017441 Protein kinase, ATP binding site CLM98_22300 IPR011009 Protein kinase-like domain superfamily CLM98_22300 IPR000719 Protein kinase domain CLM98_22310 IPR007627 RNA polymerase sigma-70 region 2 CLM98_22310 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_22310 IPR039425 RNA polymerase sigma-70 like CLM98_22310 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_22310 IPR013324 RNA polymerase sigma factor, region 3/4-like CLM98_22310 IPR013325 RNA polymerase sigma factor, region 2 CLM98_22310 IPR014284 RNA polymerase sigma-70 like domain CLM98_22330 IPR033379 Histidine acid phosphatase active site CLM98_22330 IPR000560 Histidine phosphatase superfamily, clade-2 CLM98_22330 IPR029033 Histidine phosphatase superfamily CLM98_22365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22365 IPR041546 ClpA/ClpB, AAA lid domain CLM98_22365 IPR018368 ClpA/B, conserved site 1 CLM98_22365 IPR004176 Clp, N-terminal CLM98_22365 IPR036628 Clp, N-terminal domain superfamily CLM98_22365 IPR019489 Clp ATPase, C-terminal CLM98_22365 IPR017729 Type VI secretion system, ATPase ClpV1 CLM98_22365 IPR003959 ATPase, AAA-type, core CLM98_22365 IPR003593 AAA+ ATPase domain CLM98_22365 IPR001270 ClpA/B family CLM98_22390 IPR008514 Type VI secretion system effector, Hcp CLM98_22390 IPR036624 Hcp1-like superfamily CLM98_22415 IPR024688 Maltose/galactoside acetyltransferase CLM98_22415 IPR011004 Trimeric LpxA-like superfamily CLM98_22415 IPR018357 Hexapeptide transferase, conserved site CLM98_22415 IPR001451 Hexapeptide repeat CLM98_22420 IPR013986 DExx box DNA helicase domain superfamily CLM98_22420 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_22420 IPR005753 DNA helicase, ATP-dependent, UvrD type CLM98_22420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22420 IPR034739 UvrD/AddA helicase, N-terminal CLM98_22420 IPR000212 DNA helicase, UvrD/REP type CLM98_22420 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_22435 IPR025202 Phospholipase D-like domain CLM98_22435 IPR027379 Cardiolipin synthase N-terminal CLM98_22435 IPR022924 Cardiolipin synthase CLM98_22435 IPR030874 Cardiolipin synthase, Firmicutes-type CLM98_22435 IPR001736 Phospholipase D/Transphosphatidylase CLM98_22440 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_22440 IPR000847 Transcription regulator HTH, LysR CLM98_22440 IPR005119 LysR, substrate-binding CLM98_22440 IPR036390 Winged helix DNA-binding domain superfamily CLM98_22445 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase CLM98_22445 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CLM98_22445 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CLM98_22450 IPR007400 PrpF protein CLM98_22460 IPR032466 Metal-dependent hydrolase CLM98_22460 IPR006680 Amidohydrolase-related CLM98_22460 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase CLM98_22465 IPR011332 Zinc-binding ribosomal protein CLM98_22465 IPR018264 Ribosomal protein L33, conserved site CLM98_22465 IPR001705 Ribosomal protein L33 CLM98_22465 IPR038584 Ribosomal protein L33 superfamily CLM98_22470 IPR034704 L28p-like CLM98_22470 IPR001383 Ribosomal protein L28 CLM98_22470 IPR037147 Ribosomal protein L28/L24 superfamily CLM98_22470 IPR026569 Ribosomal protein L28/L24 CLM98_22475 IPR001036 Acriflavin resistance protein CLM98_22475 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_22475 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_22480 IPR022824 Multidrug resistance protein MdtA CLM98_22480 IPR006143 RND efflux pump, membrane fusion protein CLM98_22480 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLM98_22500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_22500 IPR003682 rRNA small subunit methyltransferase G CLM98_22505 IPR032093 Phospholipase D, N-terminal CLM98_22505 IPR038607 PhoD-like superfamily CLM98_22505 IPR008963 Purple acid phosphatase-like, N-terminal CLM98_22505 IPR018946 Alkaline phosphatase D-related CLM98_22510 IPR032093 Phospholipase D, N-terminal CLM98_22510 IPR038607 PhoD-like superfamily CLM98_22510 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_22510 IPR008963 Purple acid phosphatase-like, N-terminal CLM98_22510 IPR018946 Alkaline phosphatase D-related CLM98_22515 IPR008278 4'-phosphopantetheinyl transferase domain CLM98_22515 IPR004568 Phosphopantetheine-protein transferase domain CLM98_22515 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CLM98_22520 IPR007341 Transglycosylase-associated protein CLM98_22530 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_22530 IPR004808 AP endonuclease 1 CLM98_22530 IPR020847 AP endonuclease 1, binding site CLM98_22530 IPR020848 AP endonuclease 1, conserved site CLM98_22530 IPR037493 Exodeoxyribonuclease III-like CLM98_22530 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLM98_22535 IPR000600 ROK family CLM98_22535 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_22535 IPR036390 Winged helix DNA-binding domain superfamily CLM98_22545 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLM98_22545 IPR023034 Peptidyl-prolyl isomerase SurA CLM98_22545 IPR015391 SurA N-terminal CLM98_22545 IPR027304 Trigger factor/SurA domain superfamily CLM98_22555 IPR014083 Cation/acetate symporter ActP CLM98_22555 IPR018212 Sodium/solute symporter, conserved site CLM98_22555 IPR038377 Sodium/glucose symporter superfamily CLM98_22555 IPR001734 Sodium/solute symporter CLM98_22560 IPR007436 Protein of unknown function DUF485 CLM98_22570 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CLM98_22570 IPR042099 AMP-dependent synthetase-like superfamily CLM98_22570 IPR000873 AMP-dependent synthetase/ligase CLM98_22570 IPR020845 AMP-binding, conserved site CLM98_22570 IPR025110 AMP-binding enzyme, C-terminal domain CLM98_22570 IPR011904 Acetate-CoA ligase CLM98_22575 IPR001789 Signal transduction response regulator, receiver domain CLM98_22575 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_22575 IPR011006 CheY-like superfamily CLM98_22575 IPR000792 Transcription regulator LuxR, C-terminal CLM98_22600 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLM98_22600 IPR006710 Glycoside hydrolase, family 43 CLM98_22600 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_22600 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CLM98_22610 IPR036812 NADP-dependent oxidoreductase domain superfamily CLM98_22610 IPR023210 NADP-dependent oxidoreductase domain CLM98_22620 IPR002347 Short-chain dehydrogenase/reductase SDR CLM98_22620 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_22620 IPR036291 NAD(P)-binding domain superfamily CLM98_22625 IPR011234 Fumarylacetoacetase-like, C-terminal CLM98_22625 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLM98_22635 IPR029017 Enolase-like, N-terminal CLM98_22635 IPR029065 Enolase C-terminal domain-like CLM98_22635 IPR034610 L-fuconate dehydratase CLM98_22635 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_22635 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_22635 IPR036849 Enolase-like, C-terminal domain superfamily CLM98_22645 IPR008000 Rhamnose/fucose mutarotase CLM98_22645 IPR011008 Dimeric alpha-beta barrel CLM98_22650 IPR036259 MFS transporter superfamily CLM98_22650 IPR005275 L-fucose permease FucP CLM98_22650 IPR011701 Major facilitator superfamily CLM98_22650 IPR020846 Major facilitator superfamily domain CLM98_22655 IPR029016 GAF-like domain superfamily CLM98_22655 IPR005471 Transcription regulator IclR, N-terminal CLM98_22655 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_22655 IPR036390 Winged helix DNA-binding domain superfamily CLM98_22655 IPR014757 Transcription regulator IclR, C-terminal CLM98_22660 IPR022929 Putative manganese efflux pump MntP CLM98_22660 IPR003810 Putative manganese efflux pump CLM98_22665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_22665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_22665 IPR005467 Histidine kinase domain CLM98_22665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_22665 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_22665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_22665 IPR000700 PAS-associated, C-terminal CLM98_22680 IPR010383 Glycosyl hydrolase 94 CLM98_22680 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CLM98_22680 IPR037814 Cellobionic acid phosphorylase, N-terminal CLM98_22680 IPR033432 Glycosyl hydrolase 36, catalytic domain CLM98_22680 IPR012341 Six-hairpin glycosidase-like superfamily CLM98_22680 IPR008928 Six-hairpin glycosidase superfamily CLM98_22680 IPR011013 Galactose mutarotase-like domain superfamily CLM98_22685 IPR036259 MFS transporter superfamily CLM98_22685 IPR039672 Lactose permease-like CLM98_22685 IPR018043 Sodium:galactoside symporter, conserved site CLM98_22685 IPR001927 Sodium:galactoside symporter CLM98_22690 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CLM98_22690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22700 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLM98_22700 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLM98_22700 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_22700 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_22700 IPR025666 Pyrrolo-quinoline quinone-like domain CLM98_22720 IPR007452 Translocation and assembly module TamB CLM98_22725 IPR000184 Bacterial surface antigen (D15) CLM98_22725 IPR039910 Surface antigen D15-like CLM98_22725 IPR035243 TamA, POTRA domain 1 CLM98_22750 IPR008909 DALR anticodon binding CLM98_22750 IPR006194 Glycine-tRNA synthetase, heterodimeric CLM98_22750 IPR015944 Glycine-tRNA ligase, beta subunit CLM98_22755 IPR006194 Glycine-tRNA synthetase, heterodimeric CLM98_22755 IPR002310 Glycine-tRNA ligase, alpha subunit CLM98_22760 IPR042181 Type II secretion system, protein E, N-terminal CLM98_22760 IPR007831 General secretory system II, protein E, N-terminal CLM98_22760 IPR037257 General secretory system II, protein E, N-terminal superfamily CLM98_22760 IPR001482 Type II/IV secretion system protein CLM98_22760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22760 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_22775 IPR022955 GMP synthase CLM98_22775 IPR025777 GMP synthetase ATP pyrophosphatase domain CLM98_22775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_22775 IPR029062 Class I glutamine amidotransferase-like CLM98_22775 IPR004739 GMP synthase, glutamine amidotransferase CLM98_22775 IPR001674 GMP synthase, C-terminal CLM98_22775 IPR017926 Glutamine amidotransferase CLM98_22785 IPR002033 Sec-independent periplasmic protein translocase TatC CLM98_22785 IPR019820 Sec-independent periplasmic protein translocase, conserved site CLM98_22790 IPR003369 Sec-independent protein translocase protein TatA/B/E CLM98_22790 IPR018448 Twin-arginine translocation protein TatB CLM98_22795 IPR003369 Sec-independent protein translocase protein TatA/B/E CLM98_22795 IPR006312 Sec-independent protein translocase protein TatA/E CLM98_22805 IPR001015 Ferrochelatase CLM98_22805 IPR033644 Ferrochelatase, C-terminal CLM98_22805 IPR033659 Ferrochelatase, N-terminal CLM98_22805 IPR019772 Ferrochelatase, active site CLM98_22810 IPR000639 Epoxide hydrolase-like CLM98_22810 IPR029058 Alpha/Beta hydrolase fold CLM98_22810 IPR000073 Alpha/beta hydrolase fold-1 CLM98_22830 IPR007476 Putative exonuclease, RdgC CLM98_22835 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLM98_22835 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CLM98_22835 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CLM98_22835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_22845 IPR036237 Xylose isomerase-like superfamily CLM98_22845 IPR013452 Xylose isomerase, bacterial-type CLM98_22845 IPR001998 Xylose isomerase CLM98_22850 IPR006377 Catabolite control protein A CLM98_22850 IPR000843 LacI-type HTH domain CLM98_22850 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_22850 IPR028082 Periplasmic binding protein-like I CLM98_22855 IPR005154 Alpha glucuronidase, N-terminal CLM98_22855 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily CLM98_22855 IPR011099 Glycosyl hydrolase family 67, C-terminal CLM98_22855 IPR011100 Glycosyl hydrolase family 67, catalytic domain CLM98_22855 IPR017853 Glycoside hydrolase superfamily CLM98_22855 IPR011395 Alpha glucuronidase CLM98_22855 IPR029018 Beta-hexosaminidase-like, domain 2 CLM98_22865 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_22865 IPR034589 D-mannonate dehydratase-like CLM98_22865 IPR036849 Enolase-like, C-terminal domain superfamily CLM98_22865 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_22865 IPR029017 Enolase-like, N-terminal CLM98_22865 IPR034593 Mandelate racemase-like CLM98_22865 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_22865 IPR029065 Enolase C-terminal domain-like CLM98_22870 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_22870 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CLM98_22870 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLM98_22870 IPR006710 Glycoside hydrolase, family 43 CLM98_22875 IPR011658 PA14 domain CLM98_22875 IPR037524 PA14/GLEYA domain CLM98_22875 IPR013783 Immunoglobulin-like fold CLM98_22875 IPR017853 Glycoside hydrolase superfamily CLM98_22875 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLM98_22875 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_22875 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CLM98_22875 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_22875 IPR026891 Fibronectin type III-like domain CLM98_22880 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLM98_22880 IPR013118 Mannitol dehydrogenase, C-terminal CLM98_22880 IPR023027 Mannitol dehydrogenase, conserved site CLM98_22880 IPR000669 Mannitol dehydrogenase CLM98_22880 IPR013131 Mannitol dehydrogenase, N-terminal CLM98_22880 IPR036291 NAD(P)-binding domain superfamily CLM98_22880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLM98_22915 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_22915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_22915 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_22915 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_22915 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_22915 IPR015590 Aldehyde dehydrogenase domain CLM98_22915 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CLM98_22940 IPR018483 Carbohydrate kinase, FGGY, conserved site CLM98_22940 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_22940 IPR000577 Carbohydrate kinase, FGGY CLM98_22940 IPR006000 Xylulokinase CLM98_22940 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_22960 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_22960 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_22960 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_22960 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_22965 IPR017853 Glycoside hydrolase superfamily CLM98_22965 IPR001000 Glycoside hydrolase family 10 domain CLM98_22965 IPR031158 Glycosyl hydrolases family 10, active site CLM98_22970 IPR008964 Invasin/intimin cell-adhesion fragments CLM98_22970 IPR013783 Immunoglobulin-like fold CLM98_22970 IPR008979 Galactose-binding-like domain superfamily CLM98_22970 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_22970 IPR006103 Glycoside hydrolase family 2, catalytic domain CLM98_22970 IPR017853 Glycoside hydrolase superfamily CLM98_22970 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_22970 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CLM98_22970 IPR032311 Domain of unknown function DUF4982 CLM98_22970 IPR023232 Glycoside hydrolase, family 2, active site CLM98_22970 IPR006101 Glycoside hydrolase, family 2 CLM98_22970 IPR040605 Glycoside hydrolase family 2, domain 5 CLM98_22975 IPR032466 Metal-dependent hydrolase CLM98_22975 IPR003766 Uronate isomerase CLM98_22990 IPR001919 Carbohydrate-binding type-2 domain CLM98_22990 IPR012291 CBM2, carbohydrate-binding domain superfamily CLM98_22990 IPR018366 Carbohydrate-binding type-2, conserved site CLM98_22990 IPR005084 Carbohydrate binding module family 6 CLM98_22990 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CLM98_22990 IPR001000 Glycoside hydrolase family 10 domain CLM98_22990 IPR031158 Glycosyl hydrolases family 10, active site CLM98_22990 IPR017853 Glycoside hydrolase superfamily CLM98_22990 IPR008979 Galactose-binding-like domain superfamily CLM98_23005 IPR018043 Sodium:galactoside symporter, conserved site CLM98_23005 IPR001927 Sodium:galactoside symporter CLM98_23005 IPR036259 MFS transporter superfamily CLM98_23005 IPR039672 Lactose permease-like CLM98_23010 IPR006710 Glycoside hydrolase, family 43 CLM98_23010 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLM98_23065 IPR020843 Polyketide synthase, enoylreductase domain CLM98_23065 IPR013968 Polyketide synthase, ketoreductase domain CLM98_23065 IPR042104 Polyketide synthase, dehydratase domain superfamily CLM98_23065 IPR009081 Phosphopantetheine binding ACP domain CLM98_23065 IPR006162 Phosphopantetheine attachment site CLM98_23065 IPR016039 Thiolase-like CLM98_23065 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_23065 IPR020807 Polyketide synthase, dehydratase domain CLM98_23065 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_23065 IPR032821 Ketoacyl-synthetase, C-terminal extension CLM98_23065 IPR036736 ACP-like superfamily CLM98_23065 IPR014043 Acyl transferase CLM98_23065 IPR001227 Acyl transferase domain superfamily CLM98_23065 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_23065 IPR013154 Alcohol dehydrogenase, N-terminal CLM98_23065 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_23065 IPR018201 Beta-ketoacyl synthase, active site CLM98_23065 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_23065 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_23065 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_23065 IPR036291 NAD(P)-binding domain superfamily CLM98_23065 IPR011032 GroES-like superfamily CLM98_23070 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CLM98_23070 IPR041728 GPAT/DHAPAT, acyltransferase domain CLM98_23070 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CLM98_23070 IPR002123 Phospholipid/glycerol acyltransferase CLM98_23085 IPR028082 Periplasmic binding protein-like I CLM98_23085 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLM98_23085 IPR000843 LacI-type HTH domain CLM98_23085 IPR006377 Catabolite control protein A CLM98_23100 IPR006905 Flavin-dependent halogenase CLM98_23100 IPR036188 FAD/NAD(P)-binding domain superfamily CLM98_23100 IPR033856 Flavin-dependent tryptophan halogenase CLM98_23105 IPR013785 Aldolase-type TIM barrel CLM98_23105 IPR014732 Orotidine 5'-phosphate decarboxylase CLM98_23105 IPR011060 Ribulose-phosphate binding barrel CLM98_23105 IPR001754 Orotidine 5'-phosphate decarboxylase domain CLM98_23105 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CLM98_23110 IPR023214 HAD superfamily CLM98_23110 IPR005519 Acid phosphatase, class B-like CLM98_23110 IPR006423 5-nucleotidase lipoprotein e(P4) CLM98_23110 IPR036412 HAD-like superfamily CLM98_23120 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_23120 IPR036390 Winged helix DNA-binding domain superfamily CLM98_23120 IPR007432 Protein of unknown function DUF480 CLM98_23135 IPR000212 DNA helicase, UvrD/REP type CLM98_23135 IPR005752 ATP-dependent DNA helicase Rep CLM98_23135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23135 IPR013986 DExx box DNA helicase domain superfamily CLM98_23135 IPR034739 UvrD/AddA helicase, N-terminal CLM98_23135 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_23135 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_23140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23140 IPR001267 Thymidine kinase CLM98_23145 IPR003018 GAF domain CLM98_23145 IPR029016 GAF-like domain superfamily CLM98_23145 IPR003594 Histidine kinase/HSP90-like ATPase CLM98_23145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLM98_23145 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLM98_23145 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLM98_23145 IPR035965 PAS domain superfamily CLM98_23145 IPR013654 PAS fold-2 CLM98_23145 IPR016132 Phytochrome chromophore attachment domain CLM98_23145 IPR001294 Phytochrome CLM98_23145 IPR005467 Histidine kinase domain CLM98_23145 IPR013515 Phytochrome, central region CLM98_23150 IPR014438 Glucan biosynthesis protein MdoG/MdoD CLM98_23150 IPR023724 Glucan biosynthesis, MdoD CLM98_23150 IPR013783 Immunoglobulin-like fold CLM98_23150 IPR014756 Immunoglobulin E-set CLM98_23150 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_23150 IPR014718 Glycoside hydrolase-type carbohydrate-binding CLM98_23150 IPR011013 Galactose mutarotase-like domain superfamily CLM98_23150 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CLM98_23160 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CLM98_23160 IPR035937 MutM-like, N-terminal CLM98_23160 IPR010979 Ribosomal protein S13-like, H2TH CLM98_23160 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CLM98_23160 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CLM98_23160 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CLM98_23160 IPR020629 Formamidopyrimidine-DNA glycosylase CLM98_23160 IPR010663 Zinc finger, FPG/IleRS-type CLM98_23205 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_23205 IPR000212 DNA helicase, UvrD/REP type CLM98_23205 IPR002121 HRDC domain CLM98_23205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23205 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_23205 IPR013986 DExx box DNA helicase domain superfamily CLM98_23205 IPR010997 HRDC-like superfamily CLM98_23205 IPR034739 UvrD/AddA helicase, N-terminal CLM98_23210 IPR042174 DNA-binding RecF, domain 2 CLM98_23210 IPR003395 RecF/RecN/SMC, N-terminal CLM98_23210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23210 IPR018078 DNA-binding, RecF, conserved site CLM98_23210 IPR001238 DNA-binding, RecF CLM98_23300 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CLM98_23300 IPR010614 DEAD2 CLM98_23300 IPR006555 ATP-dependent helicase, C-terminal CLM98_23300 IPR001650 Helicase, C-terminal CLM98_23300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23300 IPR039000 ATP-dependent DNA helicase DinG CLM98_23310 IPR003607 HD/PDEase domain CLM98_23310 IPR006674 HD domain CLM98_23320 IPR036388 Winged helix-like DNA-binding domain superfamily CLM98_23320 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_23320 IPR011006 CheY-like superfamily CLM98_23320 IPR001867 OmpR/PhoB-type DNA-binding domain CLM98_23320 IPR039420 Transcriptional regulatory protein WalR-like CLM98_23320 IPR001789 Signal transduction response regulator, receiver domain CLM98_23340 IPR012336 Thioredoxin-like fold CLM98_23340 IPR036249 Thioredoxin-like superfamily CLM98_23340 IPR033954 Disulphide bond isomerase, DsbC/G CLM98_23340 IPR017937 Thioredoxin, conserved site CLM98_23340 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CLM98_23340 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLM98_23365 IPR019301 Flagellar protein FlgJ, N-terminal CLM98_23365 IPR013377 Peptidoglycan hydrolase FlgJ CLM98_23365 IPR023346 Lysozyme-like domain superfamily CLM98_23365 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLM98_23395 IPR007476 Putative exonuclease, RdgC CLM98_23400 IPR035437 SNase-like, OB-fold superfamily CLM98_23400 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CLM98_23455 IPR023705 Nucleoid occlusion protein CLM98_23455 IPR004437 ParB/RepB/Spo0J partition protein CLM98_23455 IPR041468 ParB/Spo0J, HTH domain CLM98_23455 IPR036086 ParB/Sulfiredoxin superfamily CLM98_23455 IPR003115 ParB/Sulfiredoxin CLM98_23490 IPR012340 Nucleic acid-binding, OB-fold CLM98_23490 IPR011344 Single-stranded DNA-binding protein CLM98_23490 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_23515 IPR003356 DNA methylase, adenine-specific CLM98_23515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLM98_23515 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLM98_23515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_23515 IPR004546 Restriction endonuclease, type I, HsdM CLM98_23515 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CLM98_23550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23550 IPR006935 Helicase/UvrB, N-terminal CLM98_23550 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLM98_23550 IPR001650 Helicase, C-terminal CLM98_23580 IPR005751 ATP-dependent DNA helicase PcrA CLM98_23580 IPR013986 DExx box DNA helicase domain superfamily CLM98_23580 IPR034739 UvrD/AddA helicase, N-terminal CLM98_23580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23580 IPR000212 DNA helicase, UvrD/REP type CLM98_23580 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_23580 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_23650 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CLM98_23650 IPR035671 DsbD gamma CLM98_23650 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CLM98_23650 IPR013766 Thioredoxin domain CLM98_23650 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CLM98_23650 IPR022910 Thiol:disulphide interchange protein DsbD CLM98_23650 IPR036249 Thioredoxin-like superfamily CLM98_23650 IPR017937 Thioredoxin, conserved site CLM98_23655 IPR013986 DExx box DNA helicase domain superfamily CLM98_23655 IPR014017 UvrD-like DNA helicase, C-terminal CLM98_23655 IPR000212 DNA helicase, UvrD/REP type CLM98_23655 IPR005751 ATP-dependent DNA helicase PcrA CLM98_23655 IPR014016 UvrD-like helicase, ATP-binding domain CLM98_23655 IPR034739 UvrD/AddA helicase, N-terminal CLM98_23655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23745 IPR006143 RND efflux pump, membrane fusion protein CLM98_23745 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_23750 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_23750 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_23750 IPR001036 Acriflavin resistance protein CLM98_23765 IPR023696 Ureohydrolase domain superfamily CLM98_23765 IPR006035 Ureohydrolase CLM98_23765 IPR005923 Formiminoglutamase CLM98_23780 IPR012348 Ribonucleotide reductase-like CLM98_23780 IPR001757 P-type ATPase CLM98_23780 IPR027256 P-type ATPase, subfamily IB CLM98_23780 IPR023214 HAD superfamily CLM98_23780 IPR036412 HAD-like superfamily CLM98_23780 IPR023299 P-type ATPase, cytoplasmic domain N CLM98_23780 IPR023298 P-type ATPase, transmembrane domain superfamily CLM98_23780 IPR007029 YHS domain CLM98_23780 IPR018303 P-type ATPase, phosphorylation site CLM98_23780 IPR011017 TRASH domain CLM98_23780 IPR009078 Ferritin-like superfamily CLM98_23780 IPR008250 P-type ATPase, A domain superfamily CLM98_23785 IPR032694 Copper transport protein C/D CLM98_23785 IPR008457 Copper resistance protein D CLM98_23815 IPR007939 Copper resistance B precursor CLM98_23820 IPR006376 Copper-resistance protein CopA CLM98_23820 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_23820 IPR006311 Twin-arginine translocation pathway, signal sequence CLM98_23820 IPR034279 Copper resistance protein, third cupredoxin domain CLM98_23820 IPR034282 Copper resistance protein CopA, second cupredoxin domain CLM98_23820 IPR001117 Multicopper oxidase, type 1 CLM98_23820 IPR011706 Multicopper oxidase, type 2 CLM98_23820 IPR011707 Multicopper oxidase, type 3 CLM98_23820 IPR034284 Copper resistance protein, first cupredoxin domain CLM98_23820 IPR008972 Cupredoxin CLM98_23820 IPR002355 Multicopper oxidase, copper-binding site CLM98_23820 IPR033138 Multicopper oxidases, conserved site CLM98_23850 IPR011116 SecA Wing/Scaffold CLM98_23850 IPR000185 Protein translocase subunit SecA CLM98_23850 IPR020937 SecA conserved site CLM98_23850 IPR011115 SecA DEAD-like, N-terminal CLM98_23850 IPR011130 SecA, preprotein cross-linking domain CLM98_23850 IPR014018 SecA motor DEAD CLM98_23850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23850 IPR036670 SecA, preprotein cross-linking domain superfamily CLM98_23850 IPR036266 SecA, Wing/Scaffold superfamily CLM98_23850 IPR004027 SEC-C motif CLM98_23855 IPR038390 Metal-sensitive transcriptional repressor superfamily CLM98_23855 IPR003735 Metal-sensitive transcriptional repressor CLM98_23860 IPR002524 Cation efflux protein CLM98_23860 IPR027470 Cation efflux protein, cytoplasmic domain CLM98_23860 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CLM98_23860 IPR027469 Cation efflux transmembrane domain superfamily CLM98_23875 IPR001238 DNA-binding, RecF CLM98_23875 IPR041685 AAA domain, group 15 CLM98_23875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23875 IPR042174 DNA-binding RecF, domain 2 CLM98_23875 IPR018078 DNA-binding, RecF, conserved site CLM98_23895 IPR006659 Arsenate reductase CLM98_23895 IPR006660 Arsenate reductase-like CLM98_23895 IPR036249 Thioredoxin-like superfamily CLM98_23900 IPR029039 Flavoprotein-like superfamily CLM98_23900 IPR005025 NADPH-dependent FMN reductase-like CLM98_23900 IPR014063 Arsenate resistance ArsH CLM98_23905 IPR000802 Arsenical pump membrane protein, ArsB CLM98_23915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_23915 IPR001036 Acriflavin resistance protein CLM98_23915 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_23920 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CLM98_23920 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLM98_23920 IPR006143 RND efflux pump, membrane fusion protein CLM98_23940 IPR011794 Hg(II)-responsive transcriptional regulator CLM98_23940 IPR000551 MerR-type HTH domain CLM98_23940 IPR009061 Putative DNA-binding domain superfamily CLM98_23940 IPR015358 Transcription regulator MerR, DNA binding CLM98_23950 IPR025296 Domain of unknown function DUF4158 CLM98_23950 IPR002513 Tn3 transposase DDE domain CLM98_23970 IPR039418 LexA-like CLM98_23970 IPR036286 LexA/Signal peptidase-like superfamily CLM98_23970 IPR006197 Peptidase S24, LexA-like CLM98_23970 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_23975 IPR001126 UmuC domain CLM98_23975 IPR017961 DNA polymerase, Y-family, little finger domain CLM98_23975 IPR025188 Domain of unknown function DUF4113 CLM98_23975 IPR024728 DNA polymerase type-Y, HhH motif CLM98_23975 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CLM98_24110 IPR003607 HD/PDEase domain CLM98_24150 IPR009649 TraU CLM98_24250 IPR025669 AAA domain CLM98_24250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24380 IPR025669 AAA domain CLM98_24385 IPR008988 Transcriptional repressor, C-terminal CLM98_24385 IPR010575 KorB, C-terminal CLM98_24385 IPR037048 KorB, C-terminal domain superfamily CLM98_24385 IPR042075 KorB DNA-binding domain CLM98_24385 IPR013741 Repressor KorB domain CLM98_24385 IPR003115 ParB/Sulfiredoxin CLM98_24385 IPR004437 ParB/RepB/Spo0J partition protein CLM98_24385 IPR036086 ParB/Sulfiredoxin superfamily CLM98_24455 IPR033645 VirB9/CagX/TrbG, C-terminal CLM98_24455 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CLM98_24455 IPR014148 P-type conjugative transfer protein VirB9 CLM98_24455 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily CLM98_24460 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLM98_24460 IPR042217 Type IV secretion system, VirB10/TrbI CLM98_24465 IPR014155 Type IV secretion system protein VirB11 CLM98_24465 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_24465 IPR001482 Type II/IV secretion system protein CLM98_24465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24470 IPR023346 Lysozyme-like domain superfamily CLM98_24470 IPR008258 Transglycosylase SLT domain 1 CLM98_24495 IPR014059 Conjugative relaxase, N-terminal CLM98_24495 IPR014129 Conjugative transfer relaxase protein TraI CLM98_24495 IPR014862 TrwC relaxase CLM98_24495 IPR040987 TraI, N-terminal subdomain CLM98_24495 IPR040668 TraI, 2B/2B-like domain CLM98_24495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24495 IPR009767 DNA helicase, TraI type CLM98_24495 IPR014129 Conjugative transfer relaxase protein TraI CLM98_24495 IPR014059 Conjugative relaxase, N-terminal CLM98_24495 IPR040987 TraI, N-terminal subdomain CLM98_24495 IPR040668 TraI, 2B/2B-like domain CLM98_24495 IPR009767 DNA helicase, TraI type CLM98_24495 IPR014862 TrwC relaxase CLM98_24495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24555 IPR009744 VirC1 CLM98_24575 IPR005042 TAL effector repeat CLM98_24600 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLM98_24600 IPR003477 mRNA interferase PemK-like CLM98_24605 IPR039052 Antitoxin PemI-like CLM98_24605 IPR007159 SpoVT-AbrB domain CLM98_24605 IPR037914 SpoVT-AbrB domain superfamily CLM98_24610 IPR006120 Resolvase, HTH domain CLM98_24610 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_24610 IPR006119 Resolvase, N-terminal catalytic domain CLM98_24610 IPR006118 Recombinase, conserved site CLM98_24610 IPR009057 Homeobox-like domain superfamily CLM98_24625 IPR036255 YgfB-like superfamily CLM98_24625 IPR004027 SEC-C motif CLM98_24625 IPR011978 Uncharacterised protein family UPF0149 CLM98_24655 IPR009057 Homeobox-like domain superfamily CLM98_24655 IPR006118 Recombinase, conserved site CLM98_24655 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_24655 IPR006119 Resolvase, N-terminal catalytic domain CLM98_24655 IPR006120 Resolvase, HTH domain CLM98_24660 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_24660 IPR006119 Resolvase, N-terminal catalytic domain CLM98_24660 IPR006118 Recombinase, conserved site CLM98_24660 IPR006120 Resolvase, HTH domain CLM98_24700 IPR023346 Lysozyme-like domain superfamily CLM98_24700 IPR011757 Lytic transglycosylase MltB CLM98_24700 IPR031304 Transglycosylase SLT domain 2 CLM98_24705 IPR025296 Domain of unknown function DUF4158 CLM98_24705 IPR002513 Tn3 transposase DDE domain CLM98_24750 IPR005042 TAL effector repeat CLM98_24770 IPR009744 VirC1 CLM98_24770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24835 IPR006120 Resolvase, HTH domain CLM98_24835 IPR006119 Resolvase, N-terminal catalytic domain CLM98_24835 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_24835 IPR009057 Homeobox-like domain superfamily CLM98_24835 IPR006118 Recombinase, conserved site CLM98_24860 IPR025669 AAA domain CLM98_24860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24875 IPR005042 TAL effector repeat CLM98_24880 IPR006118 Recombinase, conserved site CLM98_24880 IPR006120 Resolvase, HTH domain CLM98_24880 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLM98_24880 IPR006119 Resolvase, N-terminal catalytic domain CLM98_24880 IPR009057 Homeobox-like domain superfamily CLM98_24900 IPR036266 SecA, Wing/Scaffold superfamily CLM98_24900 IPR011116 SecA Wing/Scaffold CLM98_24900 IPR011130 SecA, preprotein cross-linking domain CLM98_24900 IPR014018 SecA motor DEAD CLM98_24900 IPR011115 SecA DEAD-like, N-terminal CLM98_24900 IPR020937 SecA conserved site CLM98_24900 IPR000185 Protein translocase subunit SecA CLM98_24900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24900 IPR036670 SecA, preprotein cross-linking domain superfamily CLM98_24900 IPR004027 SEC-C motif CLM98_24910 IPR005042 TAL effector repeat