CLM98_00010 IPR004711 Benzoate transporter CLM98_00015 IPR000014 PAS domain CLM98_00015 IPR001294 Phytochrome CLM98_00015 IPR003018 GAF domain CLM98_00015 IPR013515 Phytochrome, central region CLM98_00015 IPR013654 PAS fold-2 CLM98_00015 IPR013656 PAS fold-4 CLM98_00015 IPR029016 GAF domain-like CLM98_00015 IPR035965 CLM98_00015 CLM98_00020 IPR016053 Haem oxygenase-like CLM98_00020 IPR016084 Haem oxygenase-like, multi-helical CLM98_00030 IPR002477 Peptidoglycan binding-like CLM98_00030 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CLM98_00030 IPR011013 Galactose mutarotase-like domain CLM98_00030 IPR011970 Lytic murein transglycosylase CLM98_00030 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_00030 IPR023346 Lysozyme-like domain CLM98_00030 IPR031304 CLM98_00030 CLM98_00030 IPR036365 CLM98_00030 CLM98_00030 IPR036366 CLM98_00030 CLM98_00040 IPR004027 SEC-C motif CLM98_00040 IPR023006 Uncharacterised protein family UPF0225 CLM98_00040 IPR032710 CLM98_00040 CLM98_00045 IPR002781 Transmembrane protein TauE like CLM98_00050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00055 IPR025449 Protein of unknown function DUF4194 CLM98_00060 IPR021804 Protein of unknown function DUF3375 CLM98_00065 IPR001474 GTP cyclohydrolase I CLM98_00065 IPR018234 GTP cyclohydrolase I, conserved site CLM98_00065 IPR020602 GTP cyclohydrolase I domain CLM98_00070 IPR000835 MarR-type HTH domain CLM98_00070 IPR023187 Transcriptional regulator MarR-type, conserved site CLM98_00070 IPR036388 CLM98_00070 CLM98_00070 IPR036390 CLM98_00070 CLM98_00075 IPR012451 Protein of unknown function DUF1656 CLM98_00080 IPR006143 RND efflux pump, membrane fusion protein CLM98_00080 IPR039562 CLM98_00080 CLM98_00085 IPR003423 Outer membrane efflux protein CLM98_00085 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_00090 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CLM98_00095 IPR005828 General substrate transporter CLM98_00095 IPR005829 Sugar transporter, conserved site CLM98_00095 IPR036259 CLM98_00095 CLM98_00105 IPR001736 Phospholipase D/Transphosphatidylase CLM98_00105 IPR025202 Phospholipase D-like domain CLM98_00120 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLM98_00120 IPR035093 CLM98_00120 CLM98_00125 IPR005569 Arc-like DNA binding CLM98_00125 IPR010985 Ribbon-helix-helix CLM98_00125 IPR013321 Arc-type ribbon-helix-helix CLM98_00130 IPR002716 PIN domain CLM98_00130 IPR022907 VapC family CLM98_00130 IPR029060 PIN domain-like CLM98_00135 IPR000801 Putative esterase CLM98_00135 IPR029058 Alpha/Beta hydrolase fold CLM98_00140 IPR024467 Domain of unknown function DUF2384 CLM98_00155 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_00155 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_00155 IPR020103 Pseudouridine synthase, catalytic domain CLM98_00165 IPR011050 Pectin lyase fold/virulence factor CLM98_00175 IPR009783 Protein of unknown function DUF1348 CLM98_00175 IPR032710 CLM98_00175 CLM98_00180 IPR002559 Transposase, IS4-like CLM98_00180 IPR012337 Ribonuclease H-like domain CLM98_00185 IPR000089 Biotin/lipoyl attachment CLM98_00185 IPR001882 Biotin-binding site CLM98_00185 IPR003778 Allophanate hydrolase subunit 2 CLM98_00185 IPR003833 Allophanate hydrolase subunit 1 CLM98_00185 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_00185 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CLM98_00185 IPR005482 Biotin carboxylase, C-terminal CLM98_00185 IPR011053 Single hybrid motif CLM98_00185 IPR011054 Rudiment single hybrid motif CLM98_00185 IPR014084 Urea carboxylase CLM98_00185 IPR016185 Pre-ATP-grasp domain CLM98_00185 IPR029000 Cyclophilin-like domain CLM98_00190 IPR014085 Allophanate hydrolase CLM98_00190 IPR023631 Amidase signature domain CLM98_00190 IPR036928 CLM98_00190 CLM98_00205 IPR007963 Peptidase M61, catalytic domain CLM98_00205 IPR024191 Peptidase M61 CLM98_00205 IPR036034 CLM98_00205 CLM98_00215 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_00215 IPR036452 CLM98_00215 CLM98_00220 IPR006344 Exodeoxyribonuclease V, alpha subunit CLM98_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00220 IPR027785 UvrD-like helicase C-terminal domain CLM98_00225 IPR004586 Exodeoxyribonuclease V, beta subunit CLM98_00225 IPR011335 Restriction endonuclease type II-like CLM98_00225 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLM98_00225 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_00225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00225 IPR034739 CLM98_00225 CLM98_00225 IPR038726 CLM98_00225 CLM98_00230 IPR006697 Exodeoxyribonuclease V, gamma subunit CLM98_00230 IPR011335 Restriction endonuclease type II-like CLM98_00230 IPR013986 DExx box DNA helicase domain CLM98_00230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00245 IPR003439 ABC transporter-like CLM98_00245 IPR003593 AAA+ ATPase domain CLM98_00245 IPR017871 ABC transporter, conserved site CLM98_00245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00250 IPR003453 Permease domain CLM98_00250 IPR030802 CLM98_00250 CLM98_00255 IPR003399 Mammalian cell entry-related CLM98_00255 IPR030970 CLM98_00255 CLM98_00260 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CLM98_00265 IPR002645 STAS domain CLM98_00265 IPR036513 CLM98_00265 CLM98_00270 IPR007428 VacJ-like lipoprotein CLM98_00275 IPR027843 Domain of unknown function DUF4440 CLM98_00275 IPR032710 CLM98_00275 CLM98_00280 IPR000889 Glutathione peroxidase CLM98_00280 IPR029759 Glutathione peroxidase active site CLM98_00280 IPR036249 CLM98_00280 CLM98_00290 IPR003798 DNA recombination RmuC CLM98_00295 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CLM98_00295 IPR011032 GroES (chaperonin 10)-like CLM98_00295 IPR013154 Alcohol dehydrogenase GroES-like CLM98_00295 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CLM98_00295 IPR020843 Polyketide synthase, enoylreductase CLM98_00295 IPR036291 CLM98_00295 CLM98_00300 IPR000847 Transcription regulator HTH, LysR CLM98_00300 IPR005119 LysR, substrate-binding CLM98_00300 IPR036388 CLM98_00300 CLM98_00300 IPR036390 CLM98_00300 CLM98_00315 IPR004045 Glutathione S-transferase, N-terminal CLM98_00315 IPR036249 CLM98_00315 CLM98_00315 IPR036282 CLM98_00315 CLM98_00325 IPR002293 Amino acid/polyamine transporter I CLM98_00330 IPR005887 Alpha-1,2-mannosidase, putative CLM98_00330 IPR008928 Six-hairpin glycosidase-like CLM98_00330 IPR012939 Glycosyl hydrolase family 92 CLM98_00330 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_00340 IPR024399 Protein of unknown function DUF2628 CLM98_00345 IPR000014 PAS domain CLM98_00345 IPR000160 GGDEF domain CLM98_00345 IPR001610 PAC motif CLM98_00345 IPR003018 GAF domain CLM98_00345 IPR013656 PAS fold-4 CLM98_00345 IPR029016 GAF domain-like CLM98_00345 IPR029787 Nucleotide cyclase CLM98_00345 IPR035965 CLM98_00345 CLM98_00350 IPR008599 Putative sugar diacid recognition CLM98_00350 IPR025736 PucR C-terminal helix-turn-helix domain CLM98_00355 IPR004381 Glycerate kinase CLM98_00355 IPR018193 Glycerate kinase, flavodoxin-like domain CLM98_00355 IPR018197 Glycerate kinase, restriction-enzyme-like fold CLM98_00355 IPR036129 CLM98_00355 CLM98_00360 IPR011701 Major facilitator superfamily CLM98_00360 IPR036259 CLM98_00360 CLM98_00365 IPR008257 Renal dipeptidase family CLM98_00365 IPR032466 CLM98_00365 CLM98_00375 IPR002478 PUA domain CLM98_00375 IPR015947 PUA-like domain CLM98_00375 IPR019614 S-adenosylmethionine-dependent methyltransferase CLM98_00375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_00375 IPR036974 CLM98_00375 CLM98_00385 IPR005496 Integral membrane protein TerC CLM98_00385 IPR022369 Integral membrane protein TerC, riboswitch-linked CLM98_00395 IPR022764 Peptidase S54, rhomboid domain CLM98_00395 IPR035952 CLM98_00395 CLM98_00400 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLM98_00400 IPR030395 CLM98_00400 CLM98_00405 IPR000531 TonB-dependent receptor, beta-barrel CLM98_00405 IPR010917 TonB-dependent receptor, conserved site CLM98_00405 IPR012910 TonB-dependent receptor, plug CLM98_00405 IPR037066 CLM98_00405 CLM98_00410 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_00410 IPR001011 Acid phosphatase, class A, bacterial CLM98_00410 IPR018296 Acid phosphatase, class A, bacterial, conserved site CLM98_00410 IPR036938 CLM98_00410 CLM98_00415 IPR004520 tRNA modification GTPase MnmE CLM98_00415 IPR005225 Small GTP-binding protein domain CLM98_00415 IPR006073 GTP binding domain CLM98_00415 IPR018948 GTP-binding protein TrmE, N-terminal CLM98_00415 IPR025867 tRNA modification GTPase MnmE C-terminal domain CLM98_00415 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLM98_00415 IPR027368 tRNA modification GTPase MnmE domain 2 CLM98_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00420 IPR002509 Polysaccharide deacetylase CLM98_00420 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_00420 IPR011990 Tetratricopeptide-like helical domain CLM98_00420 IPR018247 EF-Hand 1, calcium-binding site CLM98_00420 IPR019734 Tetratricopeptide repeat CLM98_00420 IPR029030 Caspase-like domain CLM98_00425 IPR001708 Membrane insertase OXA1/ALB3/YidC CLM98_00425 IPR019998 Membrane insertase YidC CLM98_00425 IPR028053 Membrane insertase YidC, N-terminal CLM98_00425 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLM98_00425 IPR038210 CLM98_00425 CLM98_00425 IPR038221 CLM98_00425 CLM98_00430 IPR000100 Ribonuclease P CLM98_00430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_00430 IPR020539 Ribonuclease P, conserved site CLM98_00430 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_00435 IPR000271 Ribosomal protein L34 CLM98_00435 IPR020939 Ribosomal protein L34, conserved site CLM98_00445 IPR001957 Chromosomal replication control, initiator DnaA CLM98_00445 IPR003593 AAA+ ATPase domain CLM98_00445 IPR010921 Trp repressor/replication initiator CLM98_00445 IPR013159 Chromosomal replication initiator, DnaA C-terminal CLM98_00445 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CLM98_00445 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CLM98_00445 IPR020591 Chromosomal replication control, initiator DnaA-like CLM98_00445 IPR024633 DnaA N-terminal domain CLM98_00445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00445 IPR038454 CLM98_00445 CLM98_00450 IPR001001 DNA polymerase III, beta chain CLM98_00450 IPR022634 DNA polymerase III, beta chain, N-terminal CLM98_00450 IPR022635 DNA polymerase III, beta chain, C-terminal CLM98_00450 IPR022637 DNA polymerase III, beta chain, central CLM98_00455 IPR001238 DNA-binding, RecF CLM98_00455 IPR003395 RecF/RecN/SMC, N-terminal CLM98_00455 IPR018078 DNA-binding, RecF, conserved site CLM98_00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00460 IPR000565 DNA topoisomerase, type IIA, subunit B CLM98_00460 IPR001241 DNA topoisomerase, type IIA CLM98_00460 IPR002288 DNA gyrase B subunit, C-terminal CLM98_00460 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_00460 IPR006171 Toprim domain CLM98_00460 IPR011557 DNA gyrase, subunit B CLM98_00460 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLM98_00460 IPR013759 DNA topoisomerase, type IIA, central domain CLM98_00460 IPR013760 DNA topoisomerase, type IIA-like domain CLM98_00460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_00460 IPR018522 DNA topoisomerase, type IIA, conserved site CLM98_00460 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_00460 IPR036890 CLM98_00460 CLM98_00465 IPR003675 CAAX amino terminal protease CLM98_00470 IPR001915 Peptidase M48 CLM98_00475 IPR011990 Tetratricopeptide-like helical domain CLM98_00475 IPR015374 Chs5p-Arf1p binding CLM98_00475 IPR019734 Tetratricopeptide repeat CLM98_00480 IPR006260 TonB, C-terminal CLM98_00480 IPR037682 CLM98_00480 CLM98_00485 IPR002898 MotA/TolQ/ExbB proton channel CLM98_00490 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_00495 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_00500 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CLM98_00500 IPR013785 Aldolase-type TIM barrel CLM98_00500 IPR036130 CLM98_00500 CLM98_00510 IPR001736 Phospholipase D/Transphosphatidylase CLM98_00510 IPR022924 Cardiolipin synthase CLM98_00510 IPR025202 Phospholipase D-like domain CLM98_00525 IPR006638 Elongator protein 3/MiaB/NifB CLM98_00525 IPR007197 Radical SAM CLM98_00530 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_00535 IPR005017 Membrane protein, aromatic hydrocarbon degradation CLM98_00540 IPR022764 Peptidase S54, rhomboid domain CLM98_00540 IPR035952 CLM98_00540 CLM98_00545 IPR014949 Protein of unknown function DUF1820 CLM98_00550 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_00550 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_00550 IPR036291 CLM98_00550 CLM98_00555 IPR001478 PDZ domain CLM98_00555 IPR004447 C-terminal-processing peptidase S41A CLM98_00555 IPR005151 Tail specific protease CLM98_00555 IPR029045 ClpP/crotonase-like domain CLM98_00555 IPR036034 CLM98_00555 CLM98_00560 IPR011055 Duplicated hybrid motif CLM98_00560 IPR016047 Peptidase M23 CLM98_00570 IPR003137 Protease-associated domain, PA CLM98_00570 IPR007484 Peptidase M28 CLM98_00575 IPR025711 PepSY domain CLM98_00580 IPR001547 Glycoside hydrolase, family 5 CLM98_00580 IPR017853 Glycoside hydrolase, superfamily CLM98_00580 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00590 IPR001547 Glycoside hydrolase, family 5 CLM98_00590 IPR017853 Glycoside hydrolase, superfamily CLM98_00590 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00600 IPR001547 Glycoside hydrolase, family 5 CLM98_00600 IPR017853 Glycoside hydrolase, superfamily CLM98_00600 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_00610 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_00610 IPR011032 GroES (chaperonin 10)-like CLM98_00610 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_00610 IPR013154 Alcohol dehydrogenase GroES-like CLM98_00610 IPR020843 Polyketide synthase, enoylreductase CLM98_00610 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_00610 IPR036291 CLM98_00610 CLM98_00615 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CLM98_00615 IPR009051 Alpha-helical ferredoxin CLM98_00615 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_00615 IPR028261 Dihydroprymidine dehydrogenase domain II CLM98_00615 IPR036188 CLM98_00615 CLM98_00620 IPR002489 Glutamate synthase, alpha subunit, C-terminal CLM98_00620 IPR002932 Glutamate synthase domain CLM98_00620 IPR006982 Glutamate synthase, central-N CLM98_00620 IPR013785 Aldolase-type TIM barrel CLM98_00620 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00620 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00620 IPR036485 CLM98_00620 CLM98_00625 IPR021719 Proteinase inhibitor I78 CLM98_00630 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_00630 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type CLM98_00630 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type CLM98_00630 IPR035447 CLM98_00630 CLM98_00645 IPR008030 NmrA-like domain CLM98_00645 IPR036291 CLM98_00645 CLM98_00650 IPR000847 Transcription regulator HTH, LysR CLM98_00650 IPR005119 LysR, substrate-binding CLM98_00650 IPR036388 CLM98_00650 CLM98_00650 IPR036390 CLM98_00650 CLM98_00660 IPR001296 Glycosyl transferase, family 1 CLM98_00660 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_00665 IPR001296 Glycosyl transferase, family 1 CLM98_00665 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_00670 IPR003362 Bacterial sugar transferase CLM98_00670 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CLM98_00670 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLM98_00675 IPR003331 UDP-N-acetylglucosamine 2-epimerase CLM98_00675 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type CLM98_00680 IPR007016 O-antigen ligase-related CLM98_00685 IPR004629 Glycosyl transferase WecB/TagA/CpsF CLM98_00690 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_00710 IPR001962 Asparagine synthase CLM98_00710 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_00710 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00710 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00720 IPR008884 Macrocin-O-methyltransferase CLM98_00725 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_00725 IPR036291 CLM98_00725 CLM98_00735 IPR002797 Polysaccharide biosynthesis protein CLM98_00735 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLM98_00740 IPR003439 ABC transporter-like CLM98_00740 IPR003593 AAA+ ATPase domain CLM98_00740 IPR011527 ABC transporter type 1, transmembrane domain CLM98_00740 IPR017871 ABC transporter, conserved site CLM98_00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00740 IPR036640 CLM98_00740 CLM98_00745 IPR032708 CLM98_00745 CLM98_00755 IPR001962 Asparagine synthase CLM98_00755 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_00755 IPR017932 Glutamine amidotransferase type 2 domain CLM98_00755 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_00760 IPR025714 Methyltransferase domain CLM98_00760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_00765 IPR008792 Coenzyme PQQ synthesis D CLM98_00775 IPR000863 Sulfotransferase domain CLM98_00775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00780 IPR000182 GNAT domain CLM98_00780 IPR016181 Acyl-CoA N-acyltransferase CLM98_00785 IPR011083 Phage tail collar domain CLM98_00785 IPR037053 CLM98_00785 CLM98_00790 IPR011083 Phage tail collar domain CLM98_00790 IPR037053 CLM98_00790 CLM98_00795 IPR011083 Phage tail collar domain CLM98_00795 IPR037053 CLM98_00795 CLM98_00800 IPR039498 CLM98_00800 CLM98_00805 IPR005650 BlaI transcriptional regulatory family CLM98_00805 IPR036388 CLM98_00805 CLM98_00805 IPR036390 CLM98_00805 CLM98_00810 IPR008756 Peptidase M56 CLM98_00830 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase CLM98_00830 IPR036291 CLM98_00830 CLM98_00835 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLM98_00835 IPR012390 Phosphoesterase SP1827 CLM98_00835 IPR015069 Domain of unknown function DUF1868 CLM98_00840 IPR000531 TonB-dependent receptor, beta-barrel CLM98_00840 IPR010104 Bacterial TonB-dependent receptor CLM98_00840 IPR012910 TonB-dependent receptor, plug CLM98_00840 IPR036942 CLM98_00840 CLM98_00840 IPR037066 CLM98_00840 CLM98_00845 IPR000600 ROK CLM98_00845 IPR036388 CLM98_00845 CLM98_00845 IPR036390 CLM98_00845 CLM98_00850 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLM98_00850 IPR030395 CLM98_00850 CLM98_00860 IPR012337 Ribonuclease H-like domain CLM98_00860 IPR038720 CLM98_00860 CLM98_00865 IPR001650 Helicase, C-terminal CLM98_00865 IPR011545 DEAD/DEAH box helicase domain CLM98_00865 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_00865 IPR018973 DEAD/DEAH-box helicase, putative CLM98_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_00870 IPR004254 Hly-III-related CLM98_00875 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLM98_00875 IPR036165 CLM98_00875 CLM98_00880 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLM98_00880 IPR035093 CLM98_00880 CLM98_00890 IPR002347 Glucose/ribitol dehydrogenase CLM98_00890 IPR036291 CLM98_00890 CLM98_00895 IPR002347 Glucose/ribitol dehydrogenase CLM98_00895 IPR036291 CLM98_00895 CLM98_00900 IPR000847 Transcription regulator HTH, LysR CLM98_00900 IPR005119 LysR, substrate-binding CLM98_00900 IPR036388 CLM98_00900 CLM98_00900 IPR036390 CLM98_00900 CLM98_00905 IPR029465 TupA-like ATPgrasp protein CLM98_00920 IPR003680 Flavodoxin-like fold CLM98_00920 IPR029039 Flavoprotein-like CLM98_00940 IPR002559 Transposase, IS4-like CLM98_00940 IPR012337 Ribonuclease H-like domain CLM98_00985 IPR008462 CsbD-like CLM98_00985 IPR036629 CLM98_00985 CLM98_00990 IPR013976 Metal-dependent hydrolase HDOD CLM98_00995 IPR013538 Activator of Hsp90 ATPase homologue 1-like CLM98_00995 IPR023393 START-like domain CLM98_01005 IPR001570 Peptidase M4, C-terminal CLM98_01005 IPR013856 Peptidase M4 domain CLM98_01005 IPR023612 Peptidase M4 CLM98_01005 IPR027268 CLM98_01005 CLM98_01010 IPR016040 NAD(P)-binding domain CLM98_01010 IPR036291 CLM98_01010 CLM98_01015 IPR000086 NUDIX hydrolase domain CLM98_01015 IPR015797 NUDIX hydrolase domain-like CLM98_01015 IPR020084 NUDIX hydrolase, conserved site CLM98_01015 IPR020476 NUDIX hydrolase CLM98_01020 IPR001915 Peptidase M48 CLM98_01030 IPR019291 Host attachment protein CLM98_01035 IPR013766 Thioredoxin domain CLM98_01035 IPR036249 CLM98_01035 CLM98_01045 IPR005828 General substrate transporter CLM98_01045 IPR005829 Sugar transporter, conserved site CLM98_01045 IPR036259 CLM98_01045 CLM98_01050 IPR013538 Activator of Hsp90 ATPase homologue 1-like CLM98_01050 IPR023393 START-like domain CLM98_01055 IPR024787 EcsC protein CLM98_01060 IPR010342 Protein of unknown function DUF938 CLM98_01060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_01075 IPR011933 Double transmembrane domain CLM98_01075 IPR024163 Aerotolerance regulator N-terminal CLM98_01080 IPR002881 Domain of unknown function DUF58 CLM98_01085 IPR011703 ATPase, AAA-3 CLM98_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01090 IPR025297 Domain of unknown function DUF4159 CLM98_01095 IPR002510 TldD/PmbA CLM98_01095 IPR035068 CLM98_01095 CLM98_01095 IPR036059 CLM98_01095 CLM98_01100 IPR002510 TldD/PmbA CLM98_01100 IPR035068 CLM98_01100 CLM98_01100 IPR036059 CLM98_01100 CLM98_01105 IPR002510 TldD/PmbA CLM98_01105 IPR035068 CLM98_01105 CLM98_01105 IPR036059 CLM98_01105 CLM98_01115 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase CLM98_01115 IPR028343 Fructose-1,6-bisphosphatase CLM98_01115 IPR033391 CLM98_01115 CLM98_01120 IPR000796 Aspartate/other aminotransferase CLM98_01120 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLM98_01120 IPR004839 Aminotransferase, class I/classII CLM98_01120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_01120 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_01120 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_01125 IPR000531 TonB-dependent receptor, beta-barrel CLM98_01125 IPR012910 TonB-dependent receptor, plug CLM98_01125 IPR036942 CLM98_01125 CLM98_01125 IPR037066 CLM98_01125 CLM98_01135 IPR011051 RmlC-like cupin domain CLM98_01135 IPR013096 Cupin 2, conserved barrel CLM98_01135 IPR014710 RmlC-like jelly roll fold CLM98_01140 IPR015590 Aldehyde dehydrogenase domain CLM98_01140 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_01140 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_01140 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_01140 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_01140 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_01145 IPR008497 Protein of unknown function DUF779 CLM98_01165 IPR000262 FMN-dependent dehydrogenase CLM98_01165 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CLM98_01165 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CLM98_01165 IPR013785 Aldolase-type TIM barrel CLM98_01165 IPR020920 L-lactate dehydrogenase, bacterial CLM98_01175 IPR001466 Beta-lactamase-related CLM98_01175 IPR012338 Beta-lactamase/transpeptidase-like CLM98_01180 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_01180 IPR036890 CLM98_01180 CLM98_01185 IPR000792 Transcription regulator LuxR, C-terminal CLM98_01185 IPR001789 Signal transduction response regulator, receiver domain CLM98_01185 IPR011006 CheY-like superfamily CLM98_01205 IPR001867 Signal transduction response regulator, C-terminal CLM98_01205 IPR011990 Tetratricopeptide-like helical domain CLM98_01205 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01205 IPR036388 CLM98_01205 CLM98_01210 IPR010758 Trans-2-enoyl-CoA reductase CLM98_01210 IPR024906 Enoyl reductase FAD binding domain CLM98_01210 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative CLM98_01220 IPR011611 Carbohydrate kinase PfkB CLM98_01220 IPR029056 Ribokinase-like CLM98_01225 IPR000531 TonB-dependent receptor, beta-barrel CLM98_01225 IPR010104 Bacterial TonB-dependent receptor CLM98_01225 IPR012910 TonB-dependent receptor, plug CLM98_01225 IPR036942 CLM98_01225 CLM98_01225 IPR037066 CLM98_01225 CLM98_01235 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_01250 IPR025309 KTSC domain CLM98_01255 IPR000477 Reverse transcriptase domain CLM98_01260 IPR002559 Transposase, IS4-like CLM98_01260 IPR012337 Ribonuclease H-like domain CLM98_01285 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01285 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_01285 IPR013783 Immunoglobulin-like fold CLM98_01285 IPR017853 Glycoside hydrolase, superfamily CLM98_01285 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S CLM98_01285 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase CLM98_01290 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01290 IPR011009 Protein kinase-like domain CLM98_01290 IPR012810 Trehalose synthase/alpha-amylase, N-terminal CLM98_01290 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain CLM98_01290 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_01290 IPR017853 Glycoside hydrolase, superfamily CLM98_01290 IPR032091 CLM98_01290 CLM98_01295 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_01295 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_01295 IPR006048 Alpha-amylase, C-terminal all beta CLM98_01295 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CLM98_01295 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_01295 IPR013783 Immunoglobulin-like fold CLM98_01295 IPR014756 Immunoglobulin E-set CLM98_01295 IPR017853 Glycoside hydrolase, superfamily CLM98_01295 IPR037439 CLM98_01295 CLM98_01300 IPR000979 Phosphodiesterase MJ0936/Vps29 CLM98_01300 IPR020935 Phosphodiesterase YfcE, conserved site CLM98_01300 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLM98_01300 IPR029052 Metallo-dependent phosphatase-like CLM98_01305 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_01305 IPR023210 NADP-dependent oxidoreductase domain CLM98_01305 IPR036812 CLM98_01305 CLM98_01310 IPR002018 Carboxylesterase, type B CLM98_01310 IPR019819 Carboxylesterase type B, conserved site CLM98_01310 IPR019826 Carboxylesterase type B, active site CLM98_01310 IPR029058 Alpha/Beta hydrolase fold CLM98_01315 IPR013094 Alpha/beta hydrolase fold-3 CLM98_01315 IPR029058 Alpha/Beta hydrolase fold CLM98_01320 IPR036663 CLM98_01320 CLM98_01325 IPR004682 TRAP dicarboxylate transporter CLM98_01325 IPR018389 Bacterial extracellular solute-binding protein, family 7 CLM98_01325 IPR038404 CLM98_01325 CLM98_01330 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLM98_01335 IPR004681 TRAP transporter permease protein CLM98_01335 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLM98_01340 IPR006710 Glycoside hydrolase, family 43 CLM98_01340 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_01340 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_01345 IPR000843 Transcription regulator HTH, LacI CLM98_01345 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_01345 IPR028082 Periplasmic binding protein-like I CLM98_01355 IPR007045 5-keto 4-deoxyuronate isomerase CLM98_01355 IPR011051 RmlC-like cupin domain CLM98_01355 IPR014710 RmlC-like jelly roll fold CLM98_01355 IPR021120 KduI/IolB isomerase CLM98_01355 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain CLM98_01360 IPR002347 Glucose/ribitol dehydrogenase CLM98_01360 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CLM98_01360 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_01360 IPR036291 CLM98_01360 CLM98_01365 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CLM98_01365 IPR022133 Ribose-5-phosphate isomerase, C-terminal CLM98_01365 IPR036569 CLM98_01365 CLM98_01370 IPR011051 RmlC-like cupin domain CLM98_01370 IPR013096 Cupin 2, conserved barrel CLM98_01370 IPR013830 CLM98_01370 CLM98_01370 IPR014710 RmlC-like jelly roll fold CLM98_01370 IPR036514 CLM98_01370 CLM98_01375 IPR007963 Peptidase M61, catalytic domain CLM98_01375 IPR024191 Peptidase M61 CLM98_01380 IPR025402 Domain of unknown function DUF4375 CLM98_01385 IPR005960 Phenylalanine-4-hydroxylase, monomeric form CLM98_01385 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site CLM98_01385 IPR019774 Aromatic amino acid hydroxylase, C-terminal CLM98_01385 IPR036329 CLM98_01385 CLM98_01385 IPR036951 CLM98_01385 CLM98_01390 IPR000485 AsnC-type HTH domain CLM98_01390 IPR011008 Dimeric alpha-beta barrel CLM98_01390 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLM98_01390 IPR019887 Transcription regulator AsnC-type, C-terminal CLM98_01390 IPR019888 Transcription regulator AsnC-type CLM98_01390 IPR036388 CLM98_01390 CLM98_01390 IPR036390 CLM98_01390 CLM98_01395 IPR000531 TonB-dependent receptor, beta-barrel CLM98_01395 IPR010105 TonB-dependent siderophore receptor CLM98_01395 IPR012910 TonB-dependent receptor, plug CLM98_01395 IPR036942 CLM98_01395 CLM98_01395 IPR037066 CLM98_01395 CLM98_01400 IPR002641 Patatin/Phospholipase A2-related CLM98_01400 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_01405 IPR002838 Mitochondrial biogenesis protein AIM24 CLM98_01405 IPR016031 Tryptophan RNA-binding attenuator protein-like domain CLM98_01405 IPR036983 CLM98_01405 CLM98_01410 IPR003439 ABC transporter-like CLM98_01410 IPR003593 AAA+ ATPase domain CLM98_01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01415 IPR005804 Fatty acid desaturase, type 1 CLM98_01420 IPR002048 EF-hand domain CLM98_01420 IPR011992 EF-hand domain pair CLM98_01420 IPR018247 EF-Hand 1, calcium-binding site CLM98_01425 IPR003439 ABC transporter-like CLM98_01425 IPR003593 AAA+ ATPase domain CLM98_01425 IPR017871 ABC transporter, conserved site CLM98_01425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01430 IPR000515 MetI-like domain CLM98_01430 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CLM98_01430 IPR035906 CLM98_01430 CLM98_01435 IPR000192 Aminotransferase class V domain CLM98_01435 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_01435 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_01435 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_01440 IPR005532 Formylglycine-generating sulphatase enzyme domain CLM98_01440 IPR016187 C-type lectin fold CLM98_01440 IPR017806 Ergothioneine biosynthesis protein EgtB CLM98_01440 IPR024775 DinB-like domain CLM98_01445 IPR017804 Methyltransferase EgtD-like CLM98_01445 IPR019257 Histidine-specific methyltransferase, SAM-dependent CLM98_01445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_01445 IPR035094 CLM98_01445 CLM98_01450 IPR021660 Protein of unknown function DUF3253 CLM98_01450 IPR036388 CLM98_01450 CLM98_01450 IPR036390 CLM98_01450 CLM98_01460 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_01460 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_01460 IPR017507 Transcription regulator, HipB-like CLM98_01465 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CLM98_01465 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLM98_01465 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CLM98_01465 IPR029061 Thiamin diphosphate-binding fold CLM98_01470 IPR011990 Tetratricopeptide-like helical domain CLM98_01475 IPR004776 Auxin efflux carrier CLM98_01475 IPR038770 CLM98_01475 CLM98_01485 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01490 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_01490 IPR029033 Histidine phosphatase superfamily CLM98_01495 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_01495 IPR036761 CLM98_01495 CLM98_01500 IPR001736 Phospholipase D/Transphosphatidylase CLM98_01500 IPR025202 Phospholipase D-like domain CLM98_01505 IPR003736 Phenylacetic acid degradation-related domain CLM98_01505 IPR006683 Thioesterase superfamily CLM98_01505 IPR029069 HotDog domain CLM98_01510 IPR002123 Phospholipid/glycerol acyltransferase CLM98_01515 IPR012020 AB-hydrolase YheT, putative CLM98_01515 IPR022742 Putative lysophospholipase CLM98_01515 IPR029058 Alpha/Beta hydrolase fold CLM98_01525 IPR011990 Tetratricopeptide-like helical domain CLM98_01525 IPR019734 Tetratricopeptide repeat CLM98_01530 IPR005247 YbhB/YbcL CLM98_01530 IPR008914 Phosphatidylethanolamine-binding protein PEBP CLM98_01530 IPR036610 CLM98_01530 CLM98_01535 IPR011032 GroES (chaperonin 10)-like CLM98_01535 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_01535 IPR013154 Alcohol dehydrogenase GroES-like CLM98_01535 IPR020843 Polyketide synthase, enoylreductase CLM98_01535 IPR036291 CLM98_01535 CLM98_01540 IPR005184 Domain of unknown function DUF306, Meta/HslJ CLM98_01540 IPR025485 Domain of unknown function DUF4377 CLM98_01540 IPR038670 CLM98_01540 CLM98_01545 IPR003824 Undecaprenyl-diphosphatase UppP CLM98_01555 IPR004809 Glutamine synthetase type I CLM98_01555 IPR008146 Glutamine synthetase, catalytic domain CLM98_01555 IPR008147 Glutamine synthetase, beta-Grasp CLM98_01555 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_01555 IPR027302 Glutamine synthetase, N-terminal conserved site CLM98_01555 IPR027303 Glutamine synthetase, glycine-rich site CLM98_01555 IPR036651 CLM98_01555 CLM98_01560 IPR002187 Nitrogen regulatory protein PII CLM98_01560 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLM98_01560 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_01560 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_01560 IPR017918 Nitrogen regulatory protein PII, conserved site CLM98_01565 IPR001905 Ammonium transporter CLM98_01565 IPR002229 Blood group Rhesus C/E/D polypeptide CLM98_01565 IPR018047 Ammonium transporter, conserved site CLM98_01565 IPR024041 Ammonium transporter AmtB-like domain CLM98_01565 IPR029020 Ammonium/urea transporter CLM98_01570 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_01570 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_01570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_01570 IPR035965 CLM98_01570 CLM98_01570 IPR036097 CLM98_01570 CLM98_01570 IPR036890 CLM98_01570 CLM98_01575 IPR001789 Signal transduction response regulator, receiver domain CLM98_01575 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_01575 IPR002197 DNA binding HTH domain, Fis-type CLM98_01575 IPR003593 AAA+ ATPase domain CLM98_01575 IPR009057 Homeodomain-like CLM98_01575 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) CLM98_01575 IPR011006 CheY-like superfamily CLM98_01575 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_01575 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_01575 IPR025944 Sigma-54 interaction domain, conserved site CLM98_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01580 IPR001424 Superoxide dismutase, copper/zinc binding domain CLM98_01580 IPR018152 Superoxide dismutase, copper/zinc, binding site CLM98_01580 IPR036423 CLM98_01580 CLM98_01585 IPR001424 Superoxide dismutase, copper/zinc binding domain CLM98_01585 IPR018152 Superoxide dismutase, copper/zinc, binding site CLM98_01585 IPR036423 CLM98_01585 CLM98_01595 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_01595 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_01605 IPR002155 Thiolase CLM98_01605 IPR016039 Thiolase-like CLM98_01605 IPR020616 Thiolase, N-terminal CLM98_01605 IPR020617 Thiolase, C-terminal CLM98_01610 IPR005254 Heme biosynthesis-associated TPR protein CLM98_01610 IPR010817 HemY, N-terminal CLM98_01610 IPR011990 Tetratricopeptide-like helical domain CLM98_01615 IPR007470 HemX CLM98_01620 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CLM98_01620 IPR036108 CLM98_01620 CLM98_01625 IPR002654 Glycosyl transferase, family 25 CLM98_01630 IPR012660 Thioesterase, putative CLM98_01630 IPR029069 HotDog domain CLM98_01640 IPR001763 Rhodanese-like domain CLM98_01640 IPR036873 CLM98_01640 CLM98_01645 IPR003708 Bacterial protein export chaperone SecB CLM98_01645 IPR035958 CLM98_01645 CLM98_01650 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CLM98_01650 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CLM98_01650 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_01650 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CLM98_01650 IPR013328 Dehydrogenase, multihelical CLM98_01650 IPR036291 CLM98_01650 CLM98_01660 IPR023614 Porin domain CLM98_01660 IPR026364 Sulfation-dependent quorum factor, Ax21 family CLM98_01665 IPR000399 TPP-binding enzyme, conserved site CLM98_01665 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLM98_01665 IPR012000 Thiamine pyrophosphate enzyme, central domain CLM98_01665 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLM98_01665 IPR029035 DHS-like NAD/FAD-binding domain CLM98_01665 IPR029061 Thiamin diphosphate-binding fold CLM98_01670 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_01670 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_01670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_01670 IPR036097 CLM98_01670 CLM98_01670 IPR036890 CLM98_01670 CLM98_01675 IPR001789 Signal transduction response regulator, receiver domain CLM98_01675 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_01675 IPR002197 DNA binding HTH domain, Fis-type CLM98_01675 IPR003593 AAA+ ATPase domain CLM98_01675 IPR009057 Homeodomain-like CLM98_01675 IPR011006 CheY-like superfamily CLM98_01675 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_01675 IPR025944 Sigma-54 interaction domain, conserved site CLM98_01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01690 IPR011701 Major facilitator superfamily CLM98_01690 IPR036259 CLM98_01690 CLM98_01695 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_01695 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CLM98_01695 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_01695 IPR029028 Alpha/beta knot methyltransferases CLM98_01705 IPR025294 Protein of unknown function DUF4156 CLM98_01710 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLM98_01710 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_01710 IPR016039 Thiolase-like CLM98_01715 IPR003812 Fido domain CLM98_01715 IPR025758 Fic/DOC N-terminal CLM98_01715 IPR026287 Adenosine monophosphate-protein transferase CLM98_01715 IPR036597 CLM98_01715 CLM98_01720 IPR000073 Alpha/beta hydrolase fold-1 CLM98_01720 IPR000639 Epoxide hydrolase-like CLM98_01720 IPR029058 Alpha/Beta hydrolase fold CLM98_01725 IPR005358 Putative zinc- or iron-chelating domain containing protein CLM98_01730 IPR000873 AMP-dependent synthetase/ligase CLM98_01730 IPR020845 AMP-binding, conserved site CLM98_01735 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CLM98_01735 IPR036291 CLM98_01735 CLM98_01740 IPR009760 Protein of unknown function DUF1328 CLM98_01750 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLM98_01750 IPR016185 Pre-ATP-grasp domain CLM98_01760 IPR003033 SCP2 sterol-binding domain CLM98_01765 IPR004147 UbiB domain CLM98_01765 IPR010232 Probable protein kinase UbiB CLM98_01765 IPR011009 Protein kinase-like domain CLM98_01770 IPR011051 RmlC-like cupin domain CLM98_01770 IPR013096 Cupin 2, conserved barrel CLM98_01770 IPR014710 RmlC-like jelly roll fold CLM98_01775 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_01775 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_01775 IPR020103 Pseudouridine synthase, catalytic domain CLM98_01780 IPR018637 Domain of unknown function DUF2059 CLM98_01785 IPR000352 Peptide chain release factor class I/class II CLM98_01790 IPR002123 Phospholipid/glycerol acyltransferase CLM98_01795 IPR000246 Peptidase T2, asparaginase 2 CLM98_01795 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_01800 IPR001567 Peptidase M3A/M3B CLM98_01800 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_01805 IPR001279 Beta-lactamase-like CLM98_01805 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CLM98_01805 IPR036866 CLM98_01805 CLM98_01815 IPR001647 DNA-binding HTH domain, TetR-type CLM98_01815 IPR009057 Homeodomain-like CLM98_01815 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_01815 IPR036271 CLM98_01815 CLM98_01815 IPR039536 CLM98_01815 CLM98_01820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_01820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_01825 IPR018060 DNA binding HTH domain, AraC-type CLM98_01825 IPR018062 HTH domain AraC-type, conserved site CLM98_01830 IPR006153 Cation/H+ exchanger CLM98_01830 IPR038770 CLM98_01830 CLM98_01835 IPR000847 Transcription regulator HTH, LysR CLM98_01835 IPR005119 LysR, substrate-binding CLM98_01835 IPR036388 CLM98_01835 CLM98_01835 IPR036390 CLM98_01835 CLM98_01840 IPR001465 Malate synthase CLM98_01840 IPR006252 Malate synthase A CLM98_01840 IPR011076 Malate synthase-like CLM98_01845 IPR006254 Isocitrate lyase CLM98_01845 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_01845 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLM98_01850 IPR000160 GGDEF domain CLM98_01850 IPR000595 Cyclic nucleotide-binding domain CLM98_01850 IPR014710 RmlC-like jelly roll fold CLM98_01850 IPR018488 Cyclic nucleotide-binding, conserved site CLM98_01850 IPR018490 Cyclic nucleotide-binding-like CLM98_01850 IPR029787 Nucleotide cyclase CLM98_01855 IPR011990 Tetratricopeptide-like helical domain CLM98_01855 IPR029787 Nucleotide cyclase CLM98_01855 IPR030966 CLM98_01855 CLM98_01860 IPR030976 CLM98_01860 CLM98_01870 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_01870 IPR002470 Peptidase S9A, prolyl oligopeptidase CLM98_01870 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_01870 IPR029058 Alpha/Beta hydrolase fold CLM98_01875 IPR000089 Biotin/lipoyl attachment CLM98_01875 IPR001882 Biotin-binding site CLM98_01875 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_01875 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CLM98_01875 IPR005482 Biotin carboxylase, C-terminal CLM98_01875 IPR011053 Single hybrid motif CLM98_01875 IPR011054 Rudiment single hybrid motif CLM98_01875 IPR016185 Pre-ATP-grasp domain CLM98_01880 IPR029045 ClpP/crotonase-like domain CLM98_01880 IPR034733 CLM98_01880 CLM98_01885 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_01885 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_01885 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_01885 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_01885 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_01885 IPR036250 CLM98_01885 CLM98_01885 IPR037069 CLM98_01885 CLM98_01890 IPR001647 DNA-binding HTH domain, TetR-type CLM98_01890 IPR009057 Homeodomain-like CLM98_01890 IPR036271 CLM98_01890 CLM98_01900 IPR014914 RES CLM98_01905 IPR021762 Protein of unknown function DUF3325 CLM98_01910 IPR005625 PepSY-associated TM helix CLM98_01915 IPR022109 Protein of unknown function DUF3649 CLM98_01925 IPR009056 Cytochrome c-like domain CLM98_01925 IPR036909 CLM98_01925 CLM98_01930 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_01930 IPR036691 CLM98_01930 CLM98_01940 IPR004891 MerC mercury resistance protein CLM98_01945 IPR003495 CobW/HypB/UreG domain CLM98_01945 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLM98_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01960 IPR022742 Putative lysophospholipase CLM98_01960 IPR029058 Alpha/Beta hydrolase fold CLM98_01965 IPR005654 ATPase, AFG1-like CLM98_01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_01965 IPR030870 CLM98_01965 CLM98_01970 IPR000835 MarR-type HTH domain CLM98_01970 IPR036388 CLM98_01970 CLM98_01970 IPR036390 CLM98_01970 CLM98_01975 IPR003718 OsmC/Ohr family CLM98_01975 IPR015946 K homology domain-like, alpha/beta CLM98_01975 IPR019953 Organic hydroperoxide resistance protein famiy CLM98_01975 IPR036102 CLM98_01975 CLM98_01985 IPR000073 Alpha/beta hydrolase fold-1 CLM98_01985 IPR029058 Alpha/Beta hydrolase fold CLM98_01990 IPR021307 Protein of unknown function DUF2884 CLM98_02005 IPR011032 GroES (chaperonin 10)-like CLM98_02005 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_02005 IPR020843 Polyketide synthase, enoylreductase CLM98_02005 IPR036291 CLM98_02005 CLM98_02010 IPR023210 NADP-dependent oxidoreductase domain CLM98_02010 IPR036812 CLM98_02010 CLM98_02015 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted CLM98_02015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_02020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_02020 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_02020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_02020 IPR020103 Pseudouridine synthase, catalytic domain CLM98_02025 IPR000531 TonB-dependent receptor, beta-barrel CLM98_02025 IPR012910 TonB-dependent receptor, plug CLM98_02025 IPR013784 Carbohydrate-binding-like fold CLM98_02025 IPR037066 CLM98_02025 CLM98_02035 IPR001650 Helicase, C-terminal CLM98_02035 IPR007502 Helicase-associated domain CLM98_02035 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type CLM98_02035 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal CLM98_02035 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02045 IPR009921 Domain of unknown function DUF1456 CLM98_02050 IPR000895 Transthyretin/hydroxyisourate hydrolase CLM98_02050 IPR014306 Hydroxyisourate hydrolase CLM98_02050 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CLM98_02050 IPR023419 Transthyretin, conserved site CLM98_02050 IPR036817 CLM98_02050 CLM98_02055 IPR036188 CLM98_02055 CLM98_02060 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CLM98_02060 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CLM98_02060 IPR036778 CLM98_02060 CLM98_02065 IPR024507 Protein of unknown function DUF3225 CLM98_02065 IPR032710 CLM98_02065 CLM98_02070 IPR002509 Polysaccharide deacetylase CLM98_02070 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_02070 IPR017625 Putative urate catabolism protein CLM98_02075 IPR000192 Aminotransferase class V domain CLM98_02075 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_02075 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_02075 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_02075 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CLM98_02080 IPR002933 Peptidase M20 CLM98_02080 IPR010158 Amidase, hydantoinase/carbamoylase CLM98_02080 IPR011650 Peptidase M20, dimerisation domain CLM98_02080 IPR036264 CLM98_02080 CLM98_02085 IPR000847 Transcription regulator HTH, LysR CLM98_02085 IPR005119 LysR, substrate-binding CLM98_02085 IPR036388 CLM98_02085 CLM98_02085 IPR036390 CLM98_02085 CLM98_02090 IPR011701 Major facilitator superfamily CLM98_02090 IPR036259 CLM98_02090 CLM98_02100 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_02105 IPR014087 Amidohydrolase, AtzE type CLM98_02105 IPR023631 Amidase signature domain CLM98_02105 IPR036928 CLM98_02105 CLM98_02110 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_02110 IPR036452 CLM98_02110 CLM98_02115 IPR001365 Adenosine/AMP deaminase domain CLM98_02115 IPR032466 CLM98_02115 CLM98_02120 IPR006043 Xanthine/uracil/vitamin C permease CLM98_02120 IPR026033 Purine permease PbuG-like CLM98_02130 IPR000951 Phthalate dioxygenase reductase CLM98_02130 IPR001041 2Fe-2S ferredoxin-type domain CLM98_02130 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_02130 IPR008333 Oxidoreductase, FAD-binding domain CLM98_02130 IPR012675 Beta-grasp domain CLM98_02130 IPR017938 Riboflavin synthase-like beta-barrel CLM98_02130 IPR036010 CLM98_02130 CLM98_02130 IPR039261 CLM98_02130 CLM98_02135 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_02135 IPR036922 CLM98_02135 CLM98_02140 IPR000847 Transcription regulator HTH, LysR CLM98_02140 IPR005119 LysR, substrate-binding CLM98_02140 IPR036388 CLM98_02140 CLM98_02140 IPR036390 CLM98_02140 CLM98_02145 IPR001130 TatD family CLM98_02145 IPR018228 Deoxyribonuclease, TatD-related, conserved site CLM98_02145 IPR032466 CLM98_02145 CLM98_02150 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_02160 IPR000847 Transcription regulator HTH, LysR CLM98_02160 IPR005119 LysR, substrate-binding CLM98_02160 IPR036388 CLM98_02160 CLM98_02160 IPR036390 CLM98_02160 CLM98_02165 IPR005829 Sugar transporter, conserved site CLM98_02165 IPR011701 Major facilitator superfamily CLM98_02165 IPR036259 CLM98_02165 CLM98_02170 IPR000551 MerR-type HTH domain CLM98_02170 IPR009061 DNA binding domain, putative CLM98_02175 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02175 IPR029058 Alpha/Beta hydrolase fold CLM98_02180 IPR003000 Sirtuin family CLM98_02180 IPR026587 Sirtuin, class II CLM98_02180 IPR026591 Sirtuin family, catalytic core small domain CLM98_02180 IPR029035 DHS-like NAD/FAD-binding domain CLM98_02185 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_02185 IPR013785 Aldolase-type TIM barrel CLM98_02190 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_02190 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_02190 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_02190 IPR013328 Dehydrogenase, multihelical CLM98_02190 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CLM98_02190 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_02190 IPR036291 CLM98_02190 CLM98_02200 IPR002376 Formyl transferase, N-terminal CLM98_02200 IPR002912 ACT domain CLM98_02200 IPR004810 Formyltetrahydrofolate deformylase CLM98_02200 IPR036477 CLM98_02200 CLM98_02205 IPR001789 Signal transduction response regulator, receiver domain CLM98_02205 IPR001867 Signal transduction response regulator, C-terminal CLM98_02205 IPR011006 CheY-like superfamily CLM98_02205 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_02205 IPR036388 CLM98_02205 CLM98_02210 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_02210 IPR003660 HAMP linker domain CLM98_02210 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_02210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_02210 IPR036097 CLM98_02210 CLM98_02210 IPR036890 CLM98_02210 CLM98_02215 IPR006143 RND efflux pump, membrane fusion protein CLM98_02215 IPR032317 CLM98_02215 CLM98_02220 IPR001036 Acriflavin resistance protein CLM98_02220 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_02220 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_02225 IPR003423 Outer membrane efflux protein CLM98_02225 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_02230 IPR029058 Alpha/Beta hydrolase fold CLM98_02235 IPR003171 Methylenetetrahydrofolate reductase CLM98_02235 IPR029041 FAD-linked oxidoreductase-like CLM98_02240 IPR003828 Protein of unknown function DUF208 CLM98_02245 IPR000847 Transcription regulator HTH, LysR CLM98_02245 IPR005119 LysR, substrate-binding CLM98_02245 IPR036388 CLM98_02245 CLM98_02245 IPR036390 CLM98_02245 CLM98_02250 IPR005025 NADPH-dependent FMN reductase-like CLM98_02250 IPR019912 FMN reductase, MsuE-like CLM98_02250 IPR029039 Flavoprotein-like CLM98_02255 IPR015004 Protein of unknown function DUF1852 CLM98_02260 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CLM98_02260 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CLM98_02260 IPR038071 CLM98_02260 CLM98_02265 IPR004684 2-keto-3-deoxygluconate permease CLM98_02265 IPR018395 2-keto-3-deoxygluconate permease, subgroup CLM98_02270 IPR010870 Phosphate-selective porin O/P CLM98_02270 IPR023614 Porin domain CLM98_02280 IPR008030 NmrA-like domain CLM98_02280 IPR036291 CLM98_02280 CLM98_02285 IPR002577 Helix-turn-helix, HxlR type CLM98_02285 IPR036388 CLM98_02285 CLM98_02285 IPR036390 CLM98_02285 CLM98_02305 IPR023393 START-like domain CLM98_02315 IPR002104 Integrase, catalytic CLM98_02315 IPR004107 Integrase, SAM-like, N-terminal CLM98_02315 IPR010998 Integrase, Lambda-type, N-terminal CLM98_02315 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_02320 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLM98_02320 IPR004404 Dihydroxy-acid dehydratase CLM98_02320 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLM98_02320 IPR037237 CLM98_02320 CLM98_02325 IPR001547 Glycoside hydrolase, family 5 CLM98_02325 IPR017853 Glycoside hydrolase, superfamily CLM98_02330 IPR005358 Putative zinc- or iron-chelating domain containing protein CLM98_02335 IPR001451 Bacterial transferase hexapeptide repeat CLM98_02335 IPR011004 Trimeric LpxA-like CLM98_02345 IPR005829 Sugar transporter, conserved site CLM98_02345 IPR011701 Major facilitator superfamily CLM98_02345 IPR036259 CLM98_02345 CLM98_02350 IPR003607 HD/PDEase domain CLM98_02350 IPR006675 Uncharacterised domain HDIG CLM98_02350 IPR021812 Protein of unknown function DUF3391 CLM98_02355 IPR000835 MarR-type HTH domain CLM98_02355 IPR036388 CLM98_02355 CLM98_02355 IPR036390 CLM98_02355 CLM98_02360 IPR025737 MetA-pathway of phenol degradation, putative CLM98_02365 IPR002347 Glucose/ribitol dehydrogenase CLM98_02365 IPR036291 CLM98_02365 CLM98_02370 IPR015590 Aldehyde dehydrogenase domain CLM98_02370 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_02370 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_02370 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_02370 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_02370 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_02375 IPR003313 AraC-type arabinose-binding/dimerisation domain CLM98_02375 IPR009057 Homeodomain-like CLM98_02375 IPR014710 RmlC-like jelly roll fold CLM98_02375 IPR018060 DNA binding HTH domain, AraC-type CLM98_02375 IPR020449 Transcription regulator HTH, AraC- type CLM98_02375 IPR037923 CLM98_02375 CLM98_02380 IPR002938 Monooxygenase, FAD-binding CLM98_02380 IPR012733 4-hydroxybenzoate 3-monooxygenase CLM98_02380 IPR036188 CLM98_02380 CLM98_02385 IPR032710 CLM98_02385 CLM98_02385 IPR037401 CLM98_02385 CLM98_02390 IPR000577 CLM98_02390 CLM98_02390 IPR005999 Glycerol kinase CLM98_02390 IPR018483 Carbohydrate kinase, FGGY, conserved site CLM98_02390 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_02390 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_02395 IPR000425 Major intrinsic protein CLM98_02395 IPR022357 Major intrinsic protein, conserved site CLM98_02395 IPR023271 Aquaporin-like CLM98_02400 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CLM98_02400 IPR006076 FAD dependent oxidoreductase CLM98_02400 IPR031656 CLM98_02400 CLM98_02400 IPR036188 CLM98_02400 CLM98_02400 IPR038299 CLM98_02400 CLM98_02405 IPR001034 HTH DeoR N-terminal domain CLM98_02405 IPR014036 DeoR C-terminal sensor domain CLM98_02405 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLM98_02405 IPR036390 CLM98_02405 CLM98_02405 IPR037171 CLM98_02405 CLM98_02410 IPR000951 Phthalate dioxygenase reductase CLM98_02410 IPR001041 2Fe-2S ferredoxin-type domain CLM98_02410 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_02410 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_02410 IPR008333 Oxidoreductase, FAD-binding domain CLM98_02410 IPR012675 Beta-grasp domain CLM98_02410 IPR017938 Riboflavin synthase-like beta-barrel CLM98_02410 IPR036010 CLM98_02410 CLM98_02410 IPR039261 CLM98_02410 CLM98_02415 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_02415 IPR036922 CLM98_02415 CLM98_02420 IPR004165 Coenzyme A transferase family I CLM98_02420 IPR037171 CLM98_02420 CLM98_02425 IPR004165 Coenzyme A transferase family I CLM98_02425 IPR037171 CLM98_02425 CLM98_02430 IPR002155 Thiolase CLM98_02430 IPR012793 Beta-ketoadipyl CoA thiolase CLM98_02430 IPR016039 Thiolase-like CLM98_02430 IPR020610 Thiolase, active site CLM98_02430 IPR020613 Thiolase, conserved site CLM98_02430 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_02430 IPR020616 Thiolase, N-terminal CLM98_02430 IPR020617 Thiolase, C-terminal CLM98_02435 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CLM98_02435 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit CLM98_02435 IPR015889 Intradiol ring-cleavage dioxygenase, core CLM98_02435 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal CLM98_02440 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CLM98_02440 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit CLM98_02440 IPR015889 Intradiol ring-cleavage dioxygenase, core CLM98_02445 IPR000362 Fumarate lyase family CLM98_02445 IPR008948 L-Aspartase-like CLM98_02445 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase CLM98_02445 IPR019468 Adenylosuccinate lyase C-terminal CLM98_02445 IPR020557 Fumarate lyase, conserved site CLM98_02445 IPR022761 Fumarate lyase, N-terminal CLM98_02445 IPR024083 Fumarase/histidase, N-terminal CLM98_02450 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02450 IPR026968 3-oxoadipate enol-lactonase 1/2 CLM98_02450 IPR029058 Alpha/Beta hydrolase fold CLM98_02455 IPR003779 Carboxymuconolactone decarboxylase-like CLM98_02455 IPR012788 4-carboxymuconolactone decarboxylase CLM98_02455 IPR029032 AhpD-like CLM98_02460 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02460 IPR022742 Putative lysophospholipase CLM98_02460 IPR029058 Alpha/Beta hydrolase fold CLM98_02465 IPR005471 Transcription regulator IclR, N-terminal CLM98_02465 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR CLM98_02465 IPR014757 Transcription regulator IclR, C-terminal CLM98_02465 IPR029016 GAF domain-like CLM98_02465 IPR036388 CLM98_02465 CLM98_02465 IPR036390 CLM98_02465 CLM98_02470 IPR000687 RIO kinase CLM98_02470 IPR011009 Protein kinase-like domain CLM98_02470 IPR018935 RIO kinase, conserved site CLM98_02475 IPR013094 Alpha/beta hydrolase fold-3 CLM98_02475 IPR029058 Alpha/Beta hydrolase fold CLM98_02480 IPR019619 Protein of unknown function DUF2490 CLM98_02485 IPR002218 Glucose-inhibited division protein A-related CLM98_02485 IPR004416 Glucose-inhibited division protein A CLM98_02485 IPR020595 Glucose-inhibited division protein A-related, conserved site CLM98_02485 IPR026904 GidA associated domain 3 CLM98_02485 IPR036188 CLM98_02485 CLM98_02495 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLM98_02495 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_02495 IPR036052 CLM98_02495 CLM98_02500 IPR003848 Domain of unknown function DUF218 CLM98_02500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_02505 IPR011721 Conserved hypothetical protein CHP02096 CLM98_02505 IPR032710 CLM98_02505 CLM98_02505 IPR037401 CLM98_02505 CLM98_02510 IPR007803 Arginine/Asparagine/Proline hydroxylase CLM98_02510 IPR027443 Isopenicillin N synthase-like CLM98_02515 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CLM98_02515 IPR013216 Methyltransferase type 11 CLM98_02515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_02520 IPR002347 Glucose/ribitol dehydrogenase CLM98_02520 IPR036291 CLM98_02520 CLM98_02525 IPR000073 Alpha/beta hydrolase fold-1 CLM98_02525 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase CLM98_02525 IPR029058 Alpha/Beta hydrolase fold CLM98_02535 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CLM98_02535 IPR004839 Aminotransferase, class I/classII CLM98_02535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_02535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_02535 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_02535 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CLM98_02540 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CLM98_02540 IPR006638 Elongator protein 3/MiaB/NifB CLM98_02540 IPR007197 Radical SAM CLM98_02540 IPR010722 Biotin and thiamin synthesis-associated domain CLM98_02540 IPR013785 Aldolase-type TIM barrel CLM98_02540 IPR024177 Biotin synthase CLM98_02545 IPR000836 Phosphoribosyltransferase domain CLM98_02545 IPR029057 Phosphoribosyltransferase-like CLM98_02550 IPR000537 UbiA prenyltransferase family CLM98_02550 IPR006370 4-hydroxybenzoate polyprenyl transferase CLM98_02550 IPR030470 CLM98_02550 CLM98_02565 IPR003591 Leucine-rich repeat, typical subtype CLM98_02565 IPR032675 CLM98_02565 CLM98_02575 IPR008718 NolX CLM98_02590 IPR010261 Tir chaperone protein (CesT) family CLM98_02615 IPR002191 Bacterial export protein family 3 CLM98_02615 IPR006306 Type III secretion protein HrpO CLM98_02620 IPR005773 Yop virulence translocation protein R CLM98_02620 IPR005838 Type III secretion system inner membrane P protein CLM98_02625 IPR001543 Surface presentation of antigen (SpoA) CLM98_02625 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CLM98_02625 IPR036429 CLM98_02625 CLM98_02630 IPR013390 Type III secretion protein HpaP CLM98_02635 IPR001712 Type III secretion system FHIPEP CLM98_02635 IPR025505 FHIPEP conserved site CLM98_02640 IPR006135 Type III secretion system substrate exporter CLM98_02640 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CLM98_02640 IPR029025 Type III secretion system substrate exporter, C-terminal CLM98_02645 IPR013394 Type III secretion system, HrpB1/HrpK CLM98_02650 IPR013391 Type III secretion protein HrpB2 CLM98_02655 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CLM98_02655 IPR006182 Secretory protein YscJ/FliF CLM98_02660 IPR013393 Type III secretion protein HrpB4 CLM98_02665 IPR012842 Type III secretion system HrpE/YscL CLM98_02665 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLM98_02670 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_02670 IPR003593 AAA+ ATPase domain CLM98_02670 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLM98_02670 IPR005714 ATPase, type III secretion system, FliI/YscN CLM98_02670 IPR013380 ATPase, type III secretion system, H+-transporting CLM98_02670 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02675 IPR013392 Type III secretion protein HrpB7 CLM98_02680 IPR002010 Type III secretion system inner membrane R protein CLM98_02680 IPR006304 Type III secretion protein SpaR/YscT CLM98_02685 IPR003522 Type III secretion system outer membrane pore YscC/HrcC CLM98_02685 IPR004845 Type II secretion system GspD, conserved site CLM98_02685 IPR004846 Type II/III secretion system CLM98_02685 IPR005644 NolW-like CLM98_02685 IPR038591 CLM98_02685 CLM98_02695 IPR008258 Lytic transglycosylase-like SLT domain CLM98_02695 IPR023346 Lysozyme-like domain CLM98_02705 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CLM98_02705 IPR036567 CLM98_02705 CLM98_02710 IPR006685 Mechanosensitive ion channel MscS CLM98_02710 IPR010920 Like-Sm (LSM) domain CLM98_02710 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLM98_02710 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLM98_02710 IPR022249 Protein of unknown function DUF3772 CLM98_02710 IPR023408 CLM98_02710 CLM98_02715 IPR000917 Sulfatase CLM98_02715 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLM98_02715 IPR017850 Alkaline-phosphatase-like, core domain CLM98_02715 IPR020881 Phosphoglycerol transferase I CLM98_02725 IPR004147 UbiB domain CLM98_02725 IPR011009 Protein kinase-like domain CLM98_02730 IPR008526 Inner membrane protein YedI CLM98_02735 IPR000160 GGDEF domain CLM98_02735 IPR029787 Nucleotide cyclase CLM98_02740 IPR001296 Glycosyl transferase, family 1 CLM98_02740 IPR011835 Glycogen/starch synthase, ADP-glucose type CLM98_02740 IPR013534 Starch synthase, catalytic domain CLM98_02745 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02745 IPR006048 Alpha-amylase, C-terminal all beta CLM98_02745 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CLM98_02745 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_02745 IPR013783 Immunoglobulin-like fold CLM98_02745 IPR014756 Immunoglobulin E-set CLM98_02745 IPR017853 Glycoside hydrolase, superfamily CLM98_02745 IPR037439 CLM98_02745 CLM98_02750 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02750 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02750 IPR012768 Malto-oligosyltrehalose trehalohydrolase CLM98_02750 IPR013783 Immunoglobulin-like fold CLM98_02750 IPR014756 Immunoglobulin E-set CLM98_02750 IPR017853 Glycoside hydrolase, superfamily CLM98_02750 IPR022567 Domain of unknown function DUF3459 CLM98_02755 IPR003385 Glycoside hydrolase, family 77 CLM98_02755 IPR017853 Glycoside hydrolase, superfamily CLM98_02760 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02760 IPR012767 Malto-oligosyltrehalose synthase CLM98_02760 IPR017853 Glycoside hydrolase, superfamily CLM98_02765 IPR021327 Protein of unknown function DUF2934 CLM98_02770 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_02770 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_02770 IPR011837 Glycogen debranching enzyme, GlgX type CLM98_02770 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_02770 IPR013783 Immunoglobulin-like fold CLM98_02770 IPR014756 Immunoglobulin E-set CLM98_02770 IPR017853 Glycoside hydrolase, superfamily CLM98_02775 IPR016040 NAD(P)-binding domain CLM98_02775 IPR036291 CLM98_02775 CLM98_02780 IPR036291 CLM98_02780 CLM98_02785 IPR002347 Glucose/ribitol dehydrogenase CLM98_02785 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_02785 IPR036291 CLM98_02785 CLM98_02795 IPR003953 FAD binding domain CLM98_02795 IPR036188 CLM98_02795 CLM98_02795 IPR038732 CLM98_02795 CLM98_02800 IPR010694 Uncharacterised protein family VirK CLM98_02805 IPR003423 Outer membrane efflux protein CLM98_02805 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_02810 IPR001647 DNA-binding HTH domain, TetR-type CLM98_02810 IPR009057 Homeodomain-like CLM98_02810 IPR036271 CLM98_02810 CLM98_02820 IPR001036 Acriflavin resistance protein CLM98_02820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_02825 IPR002347 Glucose/ribitol dehydrogenase CLM98_02825 IPR036291 CLM98_02825 CLM98_02835 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLM98_02835 IPR001650 Helicase, C-terminal CLM98_02835 IPR011545 DEAD/DEAH box helicase domain CLM98_02835 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_02840 IPR000089 Biotin/lipoyl attachment CLM98_02840 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_02840 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_02840 IPR004167 E3 binding CLM98_02840 IPR011053 Single hybrid motif CLM98_02840 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_02840 IPR036625 CLM98_02840 CLM98_02845 IPR001452 SH3 domain CLM98_02845 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 CLM98_02845 IPR036028 CLM98_02845 CLM98_02850 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_02850 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLM98_02850 IPR029061 Thiamin diphosphate-binding fold CLM98_02850 IPR033248 CLM98_02850 CLM98_02855 IPR001017 Dehydrogenase, E1 component CLM98_02855 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CLM98_02855 IPR029061 Thiamin diphosphate-binding fold CLM98_02860 IPR001322 Lamin Tail Domain CLM98_02860 IPR003644 Na-Ca exchanger/integrin-beta4 CLM98_02860 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_02860 IPR036691 CLM98_02860 CLM98_02860 IPR038081 CLM98_02860 CLM98_02865 IPR004981 Tryptophan 2,3-dioxygenase CLM98_02865 IPR037217 CLM98_02865 CLM98_02870 IPR000109 Proton-dependent oligopeptide transporter family CLM98_02870 IPR005279 Amino acid/peptide transporter family CLM98_02870 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CLM98_02870 IPR036259 CLM98_02870 CLM98_02875 IPR036249 CLM98_02875 CLM98_02880 IPR000835 MarR-type HTH domain CLM98_02880 IPR023187 Transcriptional regulator MarR-type, conserved site CLM98_02880 IPR036388 CLM98_02880 CLM98_02880 IPR036390 CLM98_02880 CLM98_02885 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_02885 IPR005956 4-hydroxyphenylpyruvate dioxygenase CLM98_02885 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_02895 IPR005708 Homogentisate 1,2-dioxygenase CLM98_02895 IPR011051 RmlC-like cupin domain CLM98_02895 IPR014710 RmlC-like jelly roll fold CLM98_02895 IPR022950 Homogentisate 1,2-dioxygenase, bacterial CLM98_02915 IPR005133 Na+/H+ antiporter subunit G CLM98_02920 IPR007208 Na(+)/H(+) antiporter subunit F-like CLM98_02925 IPR002758 Na+/H+ antiporter subunit E CLM98_02930 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_02930 IPR003918 NADH:ubiquinone oxidoreductase CLM98_02935 IPR039428 CLM98_02935 CLM98_02940 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CLM98_02940 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_02940 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CLM98_02940 IPR025383 Domain of unknown function DUF4040 CLM98_02945 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_02945 IPR036291 CLM98_02945 CLM98_02950 IPR009305 Protein of unknown function DUF962 CLM98_02965 IPR000726 Glycoside hydrolase, family 19, catalytic CLM98_02965 IPR002477 Peptidoglycan binding-like CLM98_02965 IPR011055 Duplicated hybrid motif CLM98_02965 IPR016047 Peptidase M23 CLM98_02965 IPR023346 Lysozyme-like domain CLM98_02965 IPR036365 CLM98_02965 CLM98_02965 IPR036366 CLM98_02965 CLM98_02985 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CLM98_02985 IPR018236 SAICAR synthetase, conserved site CLM98_02985 IPR028923 SAICAR synthetase/ADE2, N-terminal CLM98_02990 IPR001623 DnaJ domain CLM98_02990 IPR036869 CLM98_02990 CLM98_02995 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_02995 IPR027385 Outer membrane protein beta-barrel CLM98_03000 IPR000056 Ribulose-phosphate 3-epimerase-like CLM98_03000 IPR011060 Ribulose-phosphate binding barrel CLM98_03000 IPR013785 Aldolase-type TIM barrel CLM98_03000 IPR026019 Ribulose-phosphate 3-epimerase CLM98_03005 IPR000182 GNAT domain CLM98_03005 IPR016181 Acyl-CoA N-acyltransferase CLM98_03010 IPR001206 Diacylglycerol kinase, catalytic domain CLM98_03010 IPR005218 Diacylglycerol/lipid kinase CLM98_03010 IPR016064 ATP-NAD kinase-like domain CLM98_03010 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CLM98_03010 IPR022433 Lipid kinase YegS CLM98_03015 IPR005256 Anthranilate synthase component I, PabB-like CLM98_03015 IPR005801 ADC synthase CLM98_03015 IPR006805 Anthranilate synthase component I, N-terminal CLM98_03015 IPR015890 Chorismate binding, C-terminal CLM98_03015 IPR019999 Anthranilate synthase component I - like CLM98_03020 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CLM98_03020 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_03020 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_03020 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_03025 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CLM98_03025 IPR017926 Glutamine amidotransferase CLM98_03025 IPR029062 Class I glutamine amidotransferase-like CLM98_03030 IPR002563 Flavin reductase-like, FMN-binding CLM98_03030 IPR012349 FMN-binding split barrel CLM98_03035 IPR000312 Glycosyl transferase, family 3 CLM98_03035 IPR005940 Anthranilate phosphoribosyl transferase CLM98_03035 IPR017459 Glycosyl transferase family 3, N-terminal domain CLM98_03035 IPR035902 CLM98_03035 CLM98_03035 IPR036320 CLM98_03035 CLM98_03040 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CLM98_03040 IPR011060 Ribulose-phosphate binding barrel CLM98_03040 IPR013785 Aldolase-type TIM barrel CLM98_03040 IPR013798 Indole-3-glycerol phosphate synthase CLM98_03045 IPR023214 HAD-like domain CLM98_03045 IPR036412 CLM98_03045 CLM98_03050 IPR000595 Cyclic nucleotide-binding domain CLM98_03050 IPR012318 Helix-turn-helix motif, Crp-type CLM98_03050 IPR014710 RmlC-like jelly roll fold CLM98_03050 IPR018335 Transcription regulator HTH, Crp-type, conserved site CLM98_03050 IPR018490 Cyclic nucleotide-binding-like CLM98_03050 IPR036388 CLM98_03050 CLM98_03050 IPR036390 CLM98_03050 CLM98_03055 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CLM98_03055 IPR009165 S-adenosylmethionine decarboxylase, bacterial CLM98_03055 IPR016067 S-adenosylmethionine decarboxylase, core CLM98_03060 IPR000390 Small multidrug resistance protein family CLM98_03065 IPR009078 Ferritin-like superfamily CLM98_03065 IPR011566 Ubiquinone biosynthesis protein Coq7 CLM98_03065 IPR012347 Ferritin-related CLM98_03070 IPR005822 Ribosomal protein L13 CLM98_03070 IPR005823 Ribosomal protein L13, bacterial-type CLM98_03070 IPR023563 Ribosomal protein L13, conserved site CLM98_03070 IPR036899 CLM98_03070 CLM98_03075 IPR000754 Ribosomal protein S9 CLM98_03075 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_03075 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_03075 IPR020574 Ribosomal protein S9, conserved site CLM98_03075 IPR023035 Ribosomal protein S9, bacterial/plastid CLM98_03090 IPR000086 NUDIX hydrolase domain CLM98_03090 IPR015797 NUDIX hydrolase domain-like CLM98_03090 IPR020084 NUDIX hydrolase, conserved site CLM98_03090 IPR022927 RNA pyrophosphohydrolase RppH CLM98_03095 IPR007419 BFD-like [2Fe-2S]-binding domain CLM98_03100 IPR002024 Bacterioferritin CLM98_03100 IPR008331 Ferritin/DPS protein domain CLM98_03100 IPR009078 Ferritin-like superfamily CLM98_03100 IPR012347 Ferritin-related CLM98_03105 IPR001789 Signal transduction response regulator, receiver domain CLM98_03105 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_03105 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_03105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_03105 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_03105 IPR011006 CheY-like superfamily CLM98_03105 IPR036097 CLM98_03105 CLM98_03105 IPR036641 CLM98_03105 CLM98_03105 IPR036890 CLM98_03105 CLM98_03110 IPR000160 GGDEF domain CLM98_03110 IPR001633 EAL domain CLM98_03110 IPR001789 Signal transduction response regulator, receiver domain CLM98_03110 IPR011006 CheY-like superfamily CLM98_03110 IPR029787 Nucleotide cyclase CLM98_03110 IPR035919 CLM98_03110 CLM98_03115 IPR025196 Domain of unknown function DUF4126 CLM98_03125 IPR007607 Protein of unknown function DUF583 CLM98_03130 IPR000361 FeS cluster biogenesis CLM98_03130 IPR016092 FeS cluster insertion protein CLM98_03130 IPR017870 FeS cluster insertion, C-terminal, conserved site CLM98_03130 IPR023063 Iron-sulfur cluster insertion protein ErpA CLM98_03130 IPR035903 CLM98_03130 CLM98_03140 IPR005152 Lipase, secreted CLM98_03140 IPR029058 Alpha/Beta hydrolase fold CLM98_03145 IPR002559 Transposase, IS4-like CLM98_03145 IPR012337 Ribonuclease H-like domain CLM98_03155 IPR000086 NUDIX hydrolase domain CLM98_03155 IPR015375 NADH pyrophosphatase-like, N-terminal CLM98_03155 IPR015376 Zinc ribbon, NADH pyrophosphatase CLM98_03155 IPR015797 NUDIX hydrolase domain-like CLM98_03155 IPR020084 NUDIX hydrolase, conserved site CLM98_03160 IPR004485 Cobalamin biosynthesis CobD/CbiB CLM98_03165 IPR021215 Protein of unknown function DUF2752 CLM98_03170 IPR007593 CD225/Dispanin family CLM98_03180 IPR002123 Phospholipid/glycerol acyltransferase CLM98_03180 IPR011701 Major facilitator superfamily CLM98_03180 IPR036259 CLM98_03180 CLM98_03185 IPR000847 Transcription regulator HTH, LysR CLM98_03185 IPR005119 LysR, substrate-binding CLM98_03185 IPR036388 CLM98_03185 CLM98_03185 IPR036390 CLM98_03185 CLM98_03190 IPR011701 Major facilitator superfamily CLM98_03190 IPR036259 CLM98_03190 CLM98_03195 IPR010019 Integral membrane protein, YccS CLM98_03195 IPR010020 Integral membrane protein, YccS/YhfK CLM98_03195 IPR032692 CLM98_03195 CLM98_03205 IPR000115 Phosphoribosylglycinamide synthetase CLM98_03205 IPR011054 Rudiment single hybrid motif CLM98_03205 IPR013815 ATP-grasp fold, subdomain 1 CLM98_03205 IPR016185 Pre-ATP-grasp domain CLM98_03205 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CLM98_03205 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CLM98_03205 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLM98_03205 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CLM98_03205 IPR037123 CLM98_03205 CLM98_03215 IPR002695 AICARFT/IMPCHase bienzyme CLM98_03215 IPR011607 Methylglyoxal synthase-like domain CLM98_03215 IPR016193 Cytidine deaminase-like CLM98_03215 IPR024051 AICAR transformylase domain CLM98_03215 IPR036914 CLM98_03215 CLM98_03220 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_03225 IPR022742 Putative lysophospholipase CLM98_03225 IPR022744 Methyltransferase domain, putative CLM98_03225 IPR029058 Alpha/Beta hydrolase fold CLM98_03225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_03230 IPR000340 Dual specificity phosphatase, catalytic domain CLM98_03230 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain CLM98_03230 IPR026841 CLM98_03230 CLM98_03230 IPR029021 Protein-tyrosine phosphatase-like CLM98_03240 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain CLM98_03245 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_03250 IPR002123 Phospholipid/glycerol acyltransferase CLM98_03260 IPR002197 DNA binding HTH domain, Fis-type CLM98_03260 IPR005412 DNA-binding protein Fis CLM98_03260 IPR009057 Homeodomain-like CLM98_03265 IPR021834 Protein of unknown function DUF3426 CLM98_03270 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_03270 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_03280 IPR004498 Ribosomal protein L11 methyltransferase CLM98_03280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_03305 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CLM98_03305 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_03305 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CLM98_03305 IPR005482 Biotin carboxylase, C-terminal CLM98_03305 IPR011054 Rudiment single hybrid motif CLM98_03305 IPR013815 ATP-grasp fold, subdomain 1 CLM98_03305 IPR016185 Pre-ATP-grasp domain CLM98_03315 IPR000089 Biotin/lipoyl attachment CLM98_03315 IPR001249 Acetyl-CoA biotin carboxyl carrier CLM98_03315 IPR001882 Biotin-binding site CLM98_03315 IPR011053 Single hybrid motif CLM98_03320 IPR001874 Dehydroquinase, class II CLM98_03320 IPR018509 Dehydroquinase, class II, conserved site CLM98_03320 IPR036441 CLM98_03320 CLM98_03325 IPR003834 Cytochrome c assembly protein, transmembrane domain CLM98_03325 IPR017937 Thioredoxin, conserved site CLM98_03325 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CLM98_03325 IPR036249 CLM98_03325 CLM98_03325 IPR036929 CLM98_03325 CLM98_03330 IPR004323 Divalent ion tolerance protein, CutA CLM98_03330 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_03330 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_03335 IPR009057 Homeodomain-like CLM98_03335 IPR018060 DNA binding HTH domain, AraC-type CLM98_03335 IPR032687 CLM98_03335 CLM98_03345 IPR002913 START domain CLM98_03345 IPR023393 START-like domain CLM98_03345 IPR028347 START domain-containing protein CLM98_03360 IPR002347 Glucose/ribitol dehydrogenase CLM98_03360 IPR036291 CLM98_03360 CLM98_03365 IPR001322 Lamin Tail Domain CLM98_03365 IPR007346 Endonuclease I CLM98_03365 IPR032812 CLM98_03365 CLM98_03375 IPR011032 GroES (chaperonin 10)-like CLM98_03375 IPR018369 Chaperonin Cpn10, conserved site CLM98_03375 IPR020818 Chaperonin Cpn10 CLM98_03375 IPR037124 CLM98_03375 CLM98_03380 IPR001844 Chaperonin Cpn60 CLM98_03380 IPR002423 Chaperonin Cpn60/TCP-1 CLM98_03380 IPR018370 Chaperonin Cpn60, conserved site CLM98_03380 IPR027409 GroEL-like apical domain CLM98_03380 IPR027410 TCP-1-like chaperonin intermediate domain CLM98_03380 IPR027413 GroEL-like equatorial domain CLM98_03390 IPR000531 TonB-dependent receptor, beta-barrel CLM98_03390 IPR012910 TonB-dependent receptor, plug CLM98_03390 IPR037066 CLM98_03390 CLM98_03395 IPR006218 DAHP synthetase I/KDSA CLM98_03395 IPR006219 DHAP synthase, class 1 CLM98_03395 IPR013785 Aldolase-type TIM barrel CLM98_03410 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_03410 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_03410 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_03415 IPR011051 RmlC-like cupin domain CLM98_03415 IPR014710 RmlC-like jelly roll fold CLM98_03420 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CLM98_03420 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLM98_03420 IPR023057 Glutamate-ammonia-ligase adenylyltransferase CLM98_03425 IPR003744 Protein of unknown function DUF165 CLM98_03435 IPR000209 Peptidase S8/S53 domain CLM98_03435 IPR015366 Peptidase S53, propeptide CLM98_03435 IPR036852 CLM98_03435 CLM98_03440 IPR009367 Mitochondrial fission protein ELM1-like CLM98_03445 IPR000415 Nitroreductase-like CLM98_03445 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE CLM98_03445 IPR029479 Nitroreductase CLM98_03450 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_03450 IPR036761 CLM98_03450 CLM98_03460 IPR000560 Histidine phosphatase superfamily, clade-2 CLM98_03460 IPR029033 Histidine phosphatase superfamily CLM98_03465 IPR007037 Siderophore-interacting protein CLM98_03465 IPR013113 FAD-binding 9, siderophore-interacting CLM98_03465 IPR017938 Riboflavin synthase-like beta-barrel CLM98_03465 IPR039261 CLM98_03465 CLM98_03470 IPR005149 Transcription regulator PadR N-terminal CLM98_03470 IPR036388 CLM98_03470 CLM98_03470 IPR036390 CLM98_03470 CLM98_03475 IPR005777 Malonate decarboxylase, alpha subunit CLM98_03475 IPR037171 CLM98_03475 CLM98_03480 IPR009662 Malonate decarboxylase delta subunit CLM98_03480 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CLM98_03485 IPR017556 Malonate decarboxylase, beta subunit CLM98_03485 IPR029045 ClpP/crotonase-like domain CLM98_03485 IPR034733 CLM98_03485 CLM98_03490 IPR009648 Malonate decarboxylase gamma subunit CLM98_03490 IPR029045 ClpP/crotonase-like domain CLM98_03495 IPR017557 Phosphoribosyl-dephospho-CoA transferase CLM98_03500 IPR002736 Triphosphoribosyl-dephospho-CoA protein CLM98_03500 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CLM98_03500 IPR017555 Triphosphoribosyl-dephospho-CoA synthase CLM98_03505 IPR001227 Acyl transferase domain CLM98_03505 IPR014043 Acyl transferase CLM98_03505 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_03505 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_03505 IPR017554 Malonate decarboxylase, McdH subunit CLM98_03505 IPR020801 Polyketide synthase, acyl transferase domain CLM98_03510 IPR004680 Citrate transporter-like domain CLM98_03510 IPR009827 Dicarboxylate carrier MatC N-terminal CLM98_03515 IPR000524 Transcription regulator HTH, GntR CLM98_03515 IPR008920 Transcription regulator FadR/GntR, C-terminal CLM98_03515 IPR011711 GntR, C-terminal CLM98_03515 IPR036388 CLM98_03515 CLM98_03515 IPR036390 CLM98_03515 CLM98_03520 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_03520 IPR023214 HAD-like domain CLM98_03520 IPR036412 CLM98_03520 CLM98_03525 IPR002645 STAS domain CLM98_03525 IPR036513 CLM98_03525 CLM98_03530 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_03530 IPR036890 CLM98_03530 CLM98_03535 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLM98_03535 IPR003660 HAMP linker domain CLM98_03535 IPR029151 Periplasmic sensor domain-like CLM98_03535 IPR033479 CLM98_03535 CLM98_03535 IPR036457 CLM98_03535 CLM98_03545 IPR002921 Fungal lipase-like domain CLM98_03545 IPR029058 Alpha/Beta hydrolase fold CLM98_03550 IPR011683 Glycosyl hydrolase family 53 CLM98_03550 IPR017853 Glycoside hydrolase, superfamily CLM98_03555 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type CLM98_03555 IPR005474 Transketolase, N-terminal CLM98_03555 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLM98_03555 IPR029061 Thiamin diphosphate-binding fold CLM98_03560 IPR001525 C-5 cytosine methyltransferase CLM98_03560 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLM98_03560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_03570 IPR002347 Glucose/ribitol dehydrogenase CLM98_03570 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_03570 IPR036291 CLM98_03570 CLM98_03575 IPR009057 Homeodomain-like CLM98_03575 IPR018060 DNA binding HTH domain, AraC-type CLM98_03575 IPR018062 HTH domain AraC-type, conserved site CLM98_03575 IPR032783 CLM98_03575 CLM98_03585 IPR002347 Glucose/ribitol dehydrogenase CLM98_03585 IPR036291 CLM98_03585 CLM98_03590 IPR001107 Band 7 protein CLM98_03590 IPR036013 CLM98_03590 CLM98_03595 IPR004045 Glutathione S-transferase, N-terminal CLM98_03595 IPR016639 Glutathione S-transferase (GST) CLM98_03595 IPR036249 CLM98_03595 CLM98_03595 IPR036282 CLM98_03595 CLM98_03600 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_03600 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_03605 IPR025196 Domain of unknown function DUF4126 CLM98_03615 IPR024453 CLM98_03615 CLM98_03615 IPR038765 CLM98_03615 CLM98_03620 IPR023845 Domain of unknown function DUF3817, transmembrane CLM98_03630 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03630 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal CLM98_03630 IPR029058 Alpha/Beta hydrolase fold CLM98_03630 IPR038554 CLM98_03630 CLM98_03635 IPR011673 Protein of unknown function DUF1615 CLM98_03645 IPR000160 GGDEF domain CLM98_03645 IPR011990 Tetratricopeptide-like helical domain CLM98_03645 IPR029787 Nucleotide cyclase CLM98_03670 IPR008471 MnmC-like methyltransferase CLM98_03670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_03675 IPR000620 Drug/metabolite transporter CLM98_03680 IPR001638 Extracellular solute-binding protein, family 3 CLM98_03690 IPR002293 Amino acid/polyamine transporter I CLM98_03690 IPR004840 Amino acid permease, conserved site CLM98_03690 IPR004841 Amino acid permease/ SLC12A domain CLM98_03705 IPR002838 Mitochondrial biogenesis protein AIM24 CLM98_03705 IPR016031 Tryptophan RNA-binding attenuator protein-like domain CLM98_03705 IPR036983 CLM98_03705 CLM98_03710 IPR001661 Glycoside hydrolase, family 37 CLM98_03710 IPR008928 Six-hairpin glycosidase-like CLM98_03710 IPR012341 Six-hairpin glycosidase CLM98_03710 IPR018232 Glycoside hydrolase, family 37, conserved site CLM98_03710 IPR023720 Trehalase, periplasmic CLM98_03720 IPR002763 Protein of unknown function DUF72 CLM98_03720 IPR036520 CLM98_03720 CLM98_03725 IPR010979 Ribosomal protein S13-like, H2TH CLM98_03725 IPR012319 DNA glycosylase/AP lyase, catalytic domain CLM98_03725 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CLM98_03725 IPR035937 CLM98_03725 CLM98_03750 IPR003018 GAF domain CLM98_03750 IPR029016 GAF domain-like CLM98_03755 IPR007863 Peptidase M16, C-terminal domain CLM98_03755 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLM98_03755 IPR011765 Peptidase M16, N-terminal CLM98_03760 IPR000014 PAS domain CLM98_03760 IPR000160 GGDEF domain CLM98_03760 IPR001610 PAC motif CLM98_03760 IPR003018 GAF domain CLM98_03760 IPR013655 PAS fold-3 CLM98_03760 IPR013656 PAS fold-4 CLM98_03760 IPR029016 GAF domain-like CLM98_03760 IPR029787 Nucleotide cyclase CLM98_03760 IPR035965 CLM98_03760 CLM98_03765 IPR003660 HAMP linker domain CLM98_03765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_03765 IPR004090 Chemotaxis methyl-accepting receptor CLM98_03765 IPR033480 CLM98_03765 CLM98_03770 IPR001547 Glycoside hydrolase, family 5 CLM98_03770 IPR001919 Cellulose-binding domain, family II, bacterial-type CLM98_03770 IPR008965 Carbohydrate-binding domain CLM98_03770 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain CLM98_03770 IPR017853 Glycoside hydrolase, superfamily CLM98_03770 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_03775 IPR002645 STAS domain CLM98_03775 IPR011547 Sulphate transporter CLM98_03775 IPR036513 CLM98_03775 CLM98_03785 IPR000160 GGDEF domain CLM98_03785 IPR029787 Nucleotide cyclase CLM98_03790 IPR003137 Protease-associated domain, PA CLM98_03790 IPR007484 Peptidase M28 CLM98_03805 IPR001173 Glycosyltransferase 2-like CLM98_03805 IPR023725 Glucan biosynthesis glucosyltransferase H CLM98_03805 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_03810 IPR003140 Phospholipase/carboxylesterase/thioesterase CLM98_03810 IPR029058 Alpha/Beta hydrolase fold CLM98_03815 IPR010559 Signal transduction histidine kinase, internal region CLM98_03815 IPR036890 CLM98_03815 CLM98_03820 IPR001789 Signal transduction response regulator, receiver domain CLM98_03820 IPR007492 LytTR DNA-binding domain CLM98_03820 IPR011006 CheY-like superfamily CLM98_03825 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase CLM98_03825 IPR022417 Porphobilinogen deaminase, N-terminal CLM98_03825 IPR022418 Porphobilinogen deaminase, C-terminal CLM98_03825 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CLM98_03825 IPR036803 CLM98_03825 CLM98_03830 IPR007433 Protein of unknown function DUF481 CLM98_03840 IPR013196 Helix-turn-helix, type 11 CLM98_03840 IPR026881 WYL domain CLM98_03840 IPR036388 CLM98_03840 CLM98_03840 IPR036390 CLM98_03840 CLM98_03845 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CLM98_03845 IPR012674 Calycin CLM98_03845 IPR022271 Lipocalin, ApoD type CLM98_03845 IPR022272 Lipocalin family conserved site CLM98_03855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03855 IPR002470 Peptidase S9A, prolyl oligopeptidase CLM98_03855 IPR023302 Peptidase S9A, N-terminal domain CLM98_03855 IPR029058 Alpha/Beta hydrolase fold CLM98_03860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03870 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_03870 IPR002470 Peptidase S9A, prolyl oligopeptidase CLM98_03870 IPR023302 Peptidase S9A, N-terminal domain CLM98_03870 IPR029058 Alpha/Beta hydrolase fold CLM98_03875 IPR007401 Protein of unknown function DUF454 CLM98_03880 IPR032831 CLM98_03880 CLM98_03885 IPR001653 Diaminopimelate epimerase, DapF CLM98_03885 IPR018510 Diaminopimelate epimerase, active site CLM98_03890 IPR007435 Protein of unknown function DUF484 CLM98_03890 IPR029016 GAF domain-like CLM98_03895 IPR002104 Integrase, catalytic CLM98_03895 IPR004107 Integrase, SAM-like, N-terminal CLM98_03895 IPR010998 Integrase, Lambda-type, N-terminal CLM98_03895 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_03895 IPR011931 Tyrosine recombinase XerC CLM98_03895 IPR013762 Integrase-like, catalytic core CLM98_03895 IPR023009 Tyrosine recombinase XerC/XerD CLM98_03900 IPR001353 Proteasome, subunit alpha/beta CLM98_03900 IPR022281 ATP-dependent protease, HslV subunit CLM98_03900 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_03905 IPR003593 AAA+ ATPase domain CLM98_03905 IPR003959 ATPase, AAA-type, core CLM98_03905 IPR004491 Heat shock protein HslU CLM98_03905 IPR019489 Clp ATPase, C-terminal CLM98_03905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03910 IPR002125 CMP/dCMP deaminase, zinc-binding CLM98_03910 IPR016193 Cytidine deaminase-like CLM98_03915 IPR000182 GNAT domain CLM98_03915 IPR016181 Acyl-CoA N-acyltransferase CLM98_03920 IPR032317 CLM98_03920 CLM98_03925 IPR011701 Major facilitator superfamily CLM98_03925 IPR036259 CLM98_03925 CLM98_03930 IPR004033 UbiE/COQ5 methyltransferase CLM98_03930 IPR023576 UbiE/COQ5 methyltransferase, conserved site CLM98_03930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_03935 IPR000160 GGDEF domain CLM98_03935 IPR029787 Nucleotide cyclase CLM98_03940 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLM98_03940 IPR015211 Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal CLM98_03940 IPR016024 Armadillo-type fold CLM98_03940 IPR027268 CLM98_03940 CLM98_03940 IPR038502 CLM98_03940 CLM98_03955 IPR006439 HAD hydrolase, subfamily IA CLM98_03955 IPR023214 HAD-like domain CLM98_03955 IPR036412 CLM98_03955 CLM98_03960 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_03960 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_03960 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family CLM98_03960 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_03960 IPR025666 CLM98_03960 CLM98_03965 IPR001638 Extracellular solute-binding protein, family 3 CLM98_03965 IPR002110 Ankyrin repeat CLM98_03965 IPR020683 Ankyrin repeat-containing domain CLM98_03965 IPR022448 Quinoprotein dehydrogenase-associated CLM98_03965 IPR036770 CLM98_03965 CLM98_03970 IPR009056 Cytochrome c-like domain CLM98_03970 IPR036909 CLM98_03970 CLM98_03975 IPR011045 Nitrous oxide reductase, N-terminal CLM98_03975 IPR011964 YVTN beta-propeller repeat CLM98_03975 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_03975 IPR019405 Lactonase, 7-bladed beta propeller CLM98_03980 IPR011032 GroES (chaperonin 10)-like CLM98_03980 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_03980 IPR013154 Alcohol dehydrogenase GroES-like CLM98_03980 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CLM98_03980 IPR020843 Polyketide synthase, enoylreductase CLM98_03980 IPR036291 CLM98_03980 CLM98_03985 IPR000531 TonB-dependent receptor, beta-barrel CLM98_03985 IPR012910 TonB-dependent receptor, plug CLM98_03985 IPR037066 CLM98_03985 CLM98_03990 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_03990 IPR002197 DNA binding HTH domain, Fis-type CLM98_03990 IPR003018 GAF domain CLM98_03990 IPR003593 AAA+ ATPase domain CLM98_03990 IPR009057 Homeodomain-like CLM98_03990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_03990 IPR025944 Sigma-54 interaction domain, conserved site CLM98_03990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_03990 IPR029016 GAF domain-like CLM98_03995 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_03995 IPR011611 Carbohydrate kinase PfkB CLM98_03995 IPR029056 Ribokinase-like CLM98_04000 IPR004000 Actin-related protein CLM98_04000 IPR004753 Cell shape determining protein MreB/Mrl CLM98_04005 IPR007221 Rod shape-determining protein MreC CLM98_04010 IPR007227 Cell shape-determining protein MreD CLM98_04010 IPR026034 Cell shape-determining protein MreD, proteobacterial type CLM98_04015 IPR001460 Penicillin-binding protein, transpeptidase CLM98_04015 IPR005311 Penicillin-binding protein, dimerisation domain CLM98_04015 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04015 IPR017790 Penicillin-binding protein 2 CLM98_04015 IPR036138 CLM98_04015 CLM98_04020 IPR001182 Cell cycle protein FtsW/RodA CLM98_04020 IPR011923 Rod shape-determining protein RodA CLM98_04020 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CLM98_04025 IPR000743 Glycoside hydrolase, family 28 CLM98_04025 IPR006626 Parallel beta-helix repeat CLM98_04025 IPR011050 Pectin lyase fold/virulence factor CLM98_04025 IPR012334 Pectin lyase fold CLM98_04030 IPR011757 Lytic transglycosylase MltB CLM98_04030 IPR023346 Lysozyme-like domain CLM98_04030 IPR031304 CLM98_04030 CLM98_04035 IPR007730 Sporulation-related domain CLM98_04035 IPR009009 RlpA-like double-psi beta-barrel domain CLM98_04035 IPR012997 Rare lipoprotein A, bacterial CLM98_04035 IPR034718 CLM98_04035 CLM98_04035 IPR036680 CLM98_04035 CLM98_04035 IPR036908 CLM98_04035 CLM98_04045 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLM98_04045 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04045 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLM98_04045 IPR015956 Penicillin-binding protein-associated CLM98_04045 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLM98_04045 IPR037167 CLM98_04045 CLM98_04050 IPR018707 Protein of unknown function DUF2219 CLM98_04050 IPR037107 CLM98_04050 CLM98_04055 IPR007454 Uncharacterised protein family UPF0250 CLM98_04055 IPR027471 YbeD-like domain CLM98_04060 IPR000544 Octanoyltransferase CLM98_04060 IPR004143 Biotin/lipoate A/B protein ligase CLM98_04060 IPR020605 Octanoyltransferase, conserved site CLM98_04065 IPR003698 Lipoyl synthase CLM98_04065 IPR006638 Elongator protein 3/MiaB/NifB CLM98_04065 IPR007197 Radical SAM CLM98_04065 IPR013785 Aldolase-type TIM barrel CLM98_04065 IPR031691 CLM98_04065 CLM98_04070 IPR001478 PDZ domain CLM98_04070 IPR004447 C-terminal-processing peptidase S41A CLM98_04070 IPR005151 Tail specific protease CLM98_04070 IPR020992 Tail specific protease, C-terminal CLM98_04070 IPR029045 ClpP/crotonase-like domain CLM98_04070 IPR036034 CLM98_04070 CLM98_04075 IPR002781 Transmembrane protein TauE like CLM98_04080 IPR000847 Transcription regulator HTH, LysR CLM98_04080 IPR005119 LysR, substrate-binding CLM98_04080 IPR036388 CLM98_04080 CLM98_04080 IPR036390 CLM98_04080 CLM98_04085 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_04085 IPR036691 CLM98_04085 CLM98_04090 IPR000086 NUDIX hydrolase domain CLM98_04090 IPR004821 Cytidyltransferase-like domain CLM98_04090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_04090 IPR015797 NUDIX hydrolase domain-like CLM98_04090 IPR020084 NUDIX hydrolase, conserved site CLM98_04095 IPR007229 Nicotinate phosphoribosyltransferase family CLM98_04095 IPR013785 Aldolase-type TIM barrel CLM98_04095 IPR016471 Nicotinamide phosphoribosyl transferase CLM98_04095 IPR036068 CLM98_04095 CLM98_04105 IPR001091 Restriction/modification DNA-methylase CLM98_04105 IPR002941 DNA methylase N-4/N-6 CLM98_04105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_04110 IPR018718 Protein of unknown function DUF2242 CLM98_04115 IPR008816 Glycine zipper 2TM domain CLM98_04125 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_04125 IPR004849 6-phosphogluconate dehydrogenase-related protein CLM98_04125 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CLM98_04125 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_04125 IPR006183 CLM98_04125 CLM98_04125 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_04125 IPR013328 Dehydrogenase, multihelical CLM98_04125 IPR036291 CLM98_04125 CLM98_04130 IPR000683 Oxidoreductase, N-terminal CLM98_04130 IPR004104 Oxidoreductase, C-terminal CLM98_04130 IPR036291 CLM98_04130 CLM98_04135 IPR007055 BON domain CLM98_04135 IPR014004 Transport-associated and nodulation domain, bacteria CLM98_04140 IPR000014 PAS domain CLM98_04140 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_04140 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_04140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04140 IPR007891 CHASE3 CLM98_04140 IPR035965 CLM98_04140 CLM98_04140 IPR036097 CLM98_04140 CLM98_04140 IPR036890 CLM98_04140 CLM98_04145 IPR001789 Signal transduction response regulator, receiver domain CLM98_04145 IPR011006 CheY-like superfamily CLM98_04150 IPR001789 Signal transduction response regulator, receiver domain CLM98_04150 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_04150 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_04150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04150 IPR011006 CheY-like superfamily CLM98_04150 IPR036097 CLM98_04150 CLM98_04150 IPR036890 CLM98_04150 CLM98_04155 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLM98_04155 IPR035907 CLM98_04155 CLM98_04160 IPR002347 Glucose/ribitol dehydrogenase CLM98_04160 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_04160 IPR036291 CLM98_04160 CLM98_04165 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA CLM98_04165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_04165 IPR038375 CLM98_04165 CLM98_04175 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04175 IPR012910 TonB-dependent receptor, plug CLM98_04175 IPR036942 CLM98_04175 CLM98_04175 IPR037066 CLM98_04175 CLM98_04185 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_04185 IPR006620 Prolyl 4-hydroxylase, alpha subunit CLM98_04195 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04195 IPR012910 TonB-dependent receptor, plug CLM98_04195 IPR036942 CLM98_04195 CLM98_04195 IPR037066 CLM98_04195 CLM98_04200 IPR001478 PDZ domain CLM98_04200 IPR024961 CLM98_04200 CLM98_04200 IPR036034 CLM98_04200 CLM98_04205 IPR001775 GspD/PilQ family CLM98_04205 IPR004846 Type II/III secretion system CLM98_04205 IPR005644 NolW-like CLM98_04205 IPR013356 Type II secretion system GspD CLM98_04205 IPR038591 CLM98_04205 CLM98_04210 IPR001482 Type II secretion system protein E CLM98_04210 IPR003593 AAA+ ATPase domain CLM98_04210 IPR013369 Type II secretion system GspE CLM98_04210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04210 IPR037257 CLM98_04210 CLM98_04215 IPR001992 Type II secretion system conserved site CLM98_04215 IPR003004 GspF/PilC family CLM98_04215 IPR011850 General secretion pathway protein F CLM98_04215 IPR018076 Type II secretion system F domain CLM98_04220 IPR000983 Bacterial general secretion pathway protein G-type pilin CLM98_04220 IPR010054 General secretion pathway protein G CLM98_04220 IPR012902 Prokaryotic N-terminal methylation site CLM98_04220 IPR013545 Type II secretion system protein G CLM98_04225 IPR002416 Type II secretion system protein H CLM98_04225 IPR012902 Prokaryotic N-terminal methylation site CLM98_04225 IPR022346 General secretion pathway, GspH CLM98_04230 IPR003413 Type II secretion system protein I domain CLM98_04230 IPR010052 Type II secretion system protein I CLM98_04230 IPR012902 Prokaryotic N-terminal methylation site CLM98_04235 IPR010055 Type II secretion system protein J CLM98_04235 IPR012902 Prokaryotic N-terminal methylation site CLM98_04240 IPR005628 General secretion pathway protein K CLM98_04240 IPR038072 CLM98_04240 CLM98_04245 IPR007812 Type II secretion system protein L CLM98_04245 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CLM98_04250 IPR007690 Type II secretion system, protein M CLM98_04250 IPR023229 Type II secretion system protein M, periplasmic domain CLM98_04255 IPR022792 Type II secretion system, protein N CLM98_04260 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04260 IPR010104 Bacterial TonB-dependent receptor CLM98_04260 IPR012910 TonB-dependent receptor, plug CLM98_04260 IPR036942 CLM98_04260 CLM98_04260 IPR037066 CLM98_04260 CLM98_04270 IPR024240 Alpha-N-acetylglucosaminidase, N-terminal CLM98_04270 IPR024732 Alpha-N-acetylglucosaminidase, C-terminal CLM98_04270 IPR024733 Alpha-N-acetylglucosaminidase, tim-barrel domain CLM98_04270 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CLM98_04275 IPR012429 Protein of unknown function DUF1624 CLM98_04280 IPR000524 Transcription regulator HTH, GntR CLM98_04280 IPR011663 UbiC transcription regulator-associated CLM98_04280 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLM98_04280 IPR036388 CLM98_04280 CLM98_04280 IPR036390 CLM98_04280 CLM98_04285 IPR005964 Bacterial glucose/galactose transporter CLM98_04285 IPR011701 Major facilitator superfamily CLM98_04285 IPR036259 CLM98_04285 CLM98_04290 IPR000843 Transcription regulator HTH, LacI CLM98_04290 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_04290 IPR028082 Periplasmic binding protein-like I CLM98_04295 IPR001347 Sugar isomerase (SIS) CLM98_04300 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CLM98_04300 IPR006680 Amidohydrolase 1 CLM98_04300 IPR011059 Metal-dependent hydrolase, composite domain CLM98_04300 IPR032466 CLM98_04300 CLM98_04305 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04305 IPR010104 Bacterial TonB-dependent receptor CLM98_04305 IPR012910 TonB-dependent receptor, plug CLM98_04305 IPR036942 CLM98_04305 CLM98_04305 IPR037066 CLM98_04305 CLM98_04310 IPR002646 Poly A polymerase, head domain CLM98_04310 IPR006674 HD domain CLM98_04310 IPR012006 tRNA nucleotidyltransferase, proteobacteria CLM98_04310 IPR032828 CLM98_04310 CLM98_04315 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CLM98_04315 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CLM98_04315 IPR011533 Oxygen-dependent choline dehydrogenase CLM98_04315 IPR012132 Glucose-methanol-choline oxidoreductase CLM98_04315 IPR027424 Glucose Oxidase, domain 2 CLM98_04315 IPR036188 CLM98_04315 CLM98_04320 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase CLM98_04320 IPR015590 Aldehyde dehydrogenase domain CLM98_04320 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_04320 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_04320 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_04320 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_04320 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_04325 IPR000060 BCCT transporter family CLM98_04325 IPR018093 BCCT transporter, conserved site CLM98_04335 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_04335 IPR036691 CLM98_04335 CLM98_04340 IPR001853 DSBA-like thioredoxin domain CLM98_04340 IPR036249 CLM98_04340 CLM98_04345 IPR012336 Thioredoxin-like fold CLM98_04345 IPR017937 Thioredoxin, conserved site CLM98_04345 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CLM98_04345 IPR036249 CLM98_04345 CLM98_04350 IPR009056 Cytochrome c-like domain CLM98_04350 IPR024167 Cytochrome c4 CLM98_04350 IPR036909 CLM98_04350 CLM98_04355 IPR006073 GTP binding domain CLM98_04355 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CLM98_04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04360 IPR001279 Beta-lactamase-like CLM98_04360 IPR036866 CLM98_04360 CLM98_04365 IPR009057 Homeodomain-like CLM98_04365 IPR018060 DNA binding HTH domain, AraC-type CLM98_04375 IPR006336 Glutamate--cysteine ligase, GCS2 CLM98_04375 IPR011556 Glutamate--cysteine ligase, plant CLM98_04375 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_04375 IPR035434 CLM98_04375 CLM98_04380 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_04380 IPR003660 HAMP linker domain CLM98_04380 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_04380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04380 IPR036097 CLM98_04380 CLM98_04380 IPR036890 CLM98_04380 CLM98_04385 IPR001789 Signal transduction response regulator, receiver domain CLM98_04385 IPR001867 Signal transduction response regulator, C-terminal CLM98_04385 IPR011006 CheY-like superfamily CLM98_04385 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_04385 IPR036388 CLM98_04385 CLM98_04390 IPR001296 Glycosyl transferase, family 1 CLM98_04400 IPR003735 Metal-sensitive transcriptional repressor CLM98_04400 IPR038390 CLM98_04400 CLM98_04405 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_04405 IPR011032 GroES (chaperonin 10)-like CLM98_04405 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_04405 IPR013154 Alcohol dehydrogenase GroES-like CLM98_04405 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CLM98_04405 IPR020843 Polyketide synthase, enoylreductase CLM98_04405 IPR036291 CLM98_04405 CLM98_04410 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CLM98_04410 IPR011057 Mss4-like CLM98_04410 IPR014185 Glutathione-dependent formaldehyde-activating enzyme CLM98_04415 IPR000801 Putative esterase CLM98_04415 IPR014186 S-formylglutathione hydrolase CLM98_04415 IPR029058 Alpha/Beta hydrolase fold CLM98_04425 IPR000524 Transcription regulator HTH, GntR CLM98_04425 IPR004839 Aminotransferase, class I/classII CLM98_04425 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_04425 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_04425 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_04425 IPR036388 CLM98_04425 CLM98_04425 IPR036390 CLM98_04425 CLM98_04430 IPR003719 Phenazine biosynthesis PhzF protein CLM98_04435 IPR000620 Drug/metabolite transporter CLM98_04445 IPR003439 ABC transporter-like CLM98_04445 IPR003593 AAA+ ATPase domain CLM98_04445 IPR017871 ABC transporter, conserved site CLM98_04445 IPR022374 ABC transporter, ATP-binding protein, ChvD CLM98_04445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04445 IPR032781 CLM98_04445 CLM98_04450 IPR024572 Protein of unknown function DUF3315 CLM98_04455 IPR001085 Serine hydroxymethyltransferase CLM98_04455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_04455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_04455 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_04455 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLM98_04455 IPR039429 CLM98_04455 CLM98_04460 IPR003796 Ribonucleotide reductase regulator NrdR-like CLM98_04460 IPR005144 ATP-cone CLM98_04465 IPR000182 GNAT domain CLM98_04465 IPR016181 Acyl-CoA N-acyltransferase CLM98_04470 IPR002125 CMP/dCMP deaminase, zinc-binding CLM98_04470 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CLM98_04470 IPR004794 Riboflavin biosynthesis protein RibD CLM98_04470 IPR011549 Riboflavin-specific deaminase, C-terminal CLM98_04470 IPR016192 APOBEC/CMP deaminase, zinc-binding CLM98_04470 IPR016193 Cytidine deaminase-like CLM98_04470 IPR024072 Dihydrofolate reductase-like domain CLM98_04475 IPR023614 Porin domain CLM98_04480 IPR001783 Lumazine-binding protein CLM98_04480 IPR017938 Riboflavin synthase-like beta-barrel CLM98_04480 IPR023366 ATP synthase subunit alpha-like domain CLM98_04480 IPR026017 Lumazine-binding domain CLM98_04485 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CLM98_04485 IPR017945 DHBP synthase RibB-like alpha/beta domain CLM98_04485 IPR032677 CLM98_04485 CLM98_04485 IPR036144 CLM98_04485 CLM98_04490 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CLM98_04490 IPR034964 CLM98_04490 CLM98_04490 IPR036467 CLM98_04490 CLM98_04495 IPR006027 NusB/RsmB/TIM44 CLM98_04495 IPR011605 NusB antitermination factor CLM98_04495 IPR035926 CLM98_04495 CLM98_04500 IPR006283 Thiamine-monophosphate kinase CLM98_04500 IPR010918 AIR synthase-related protein, C-terminal domain CLM98_04500 IPR016188 PurM, N-terminal-like CLM98_04500 IPR036676 CLM98_04500 CLM98_04500 IPR036921 CLM98_04500 CLM98_04510 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CLM98_04510 IPR008979 Galactose-binding domain-like CLM98_04510 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CLM98_04510 IPR029058 Alpha/Beta hydrolase fold CLM98_04515 IPR001810 F-box domain CLM98_04515 IPR036047 CLM98_04515 CLM98_04520 IPR011726 K+ transporting P-type ATPase, F subunit CLM98_04525 IPR004623 Potassium-transporting ATPase A chain CLM98_04530 IPR001757 Cation-transporting P-type ATPase CLM98_04530 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA CLM98_04530 IPR008250 P-type ATPase, A domain CLM98_04530 IPR018303 P-type ATPase, phosphorylation site CLM98_04530 IPR023298 P-type ATPase, transmembrane domain CLM98_04530 IPR023299 P-type ATPase, cytoplasmic domain N CLM98_04530 IPR036412 CLM98_04530 CLM98_04535 IPR003820 Potassium-transporting ATPase C chain CLM98_04540 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_04540 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_04540 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CLM98_04540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04540 IPR006016 UspA CLM98_04540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_04540 IPR025201 Sensor protein KdpD, transmembrane domain CLM98_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04540 IPR029016 GAF domain-like CLM98_04540 IPR036097 CLM98_04540 CLM98_04540 IPR036890 CLM98_04540 CLM98_04540 IPR038318 CLM98_04540 CLM98_04545 IPR001789 Signal transduction response regulator, receiver domain CLM98_04545 IPR001867 Signal transduction response regulator, C-terminal CLM98_04545 IPR011006 CheY-like superfamily CLM98_04545 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_04545 IPR036388 CLM98_04545 CLM98_04560 IPR004113 FAD-linked oxidase, C-terminal CLM98_04560 IPR006094 FAD linked oxidase, N-terminal CLM98_04560 IPR016164 FAD-linked oxidase-like, C-terminal CLM98_04560 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLM98_04560 IPR036318 CLM98_04560 CLM98_04565 IPR007404 Protein of unknown function DUF457 CLM98_04570 IPR003509 Uncharacterised protein family UPF0102 CLM98_04570 IPR011335 Restriction endonuclease type II-like CLM98_04570 IPR011856 tRNA endonuclease-like domain CLM98_04575 IPR007443 Penicillin-binding protein activator LpoA CLM98_04575 IPR028082 Periplasmic binding protein-like I CLM98_04580 IPR000878 Tetrapyrrole methylase CLM98_04580 IPR008189 rRNA small subunit methyltransferase I CLM98_04580 IPR014776 Tetrapyrrole methylase, subdomain 2 CLM98_04580 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_04580 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CLM98_04580 IPR035996 CLM98_04580 CLM98_04590 IPR009956 Post-segregation antitoxin CcdA CLM98_04595 IPR008551 Protein of unknown function DUF833 CLM98_04600 IPR003444 MraZ CLM98_04600 IPR020603 MraZ domain CLM98_04600 IPR037914 CLM98_04600 CLM98_04600 IPR038619 CLM98_04600 CLM98_04605 IPR002903 Ribosomal RNA small subunit methyltransferase H CLM98_04605 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain CLM98_04605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_04610 IPR011922 Cell division protein FtsL CLM98_04615 IPR001460 Penicillin-binding protein, transpeptidase CLM98_04615 IPR005311 Penicillin-binding protein, dimerisation domain CLM98_04615 IPR012338 Beta-lactamase/transpeptidase-like CLM98_04615 IPR036138 CLM98_04615 CLM98_04615 IPR037532 CLM98_04615 CLM98_04620 IPR000713 Mur ligase, N-terminal CLM98_04620 IPR004101 Mur ligase, C-terminal CLM98_04620 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CLM98_04620 IPR013221 Mur ligase, central CLM98_04620 IPR035911 CLM98_04620 CLM98_04620 IPR036565 CLM98_04620 CLM98_04620 IPR036615 CLM98_04620 CLM98_04625 IPR000713 Mur ligase, N-terminal CLM98_04625 IPR004101 Mur ligase, C-terminal CLM98_04625 IPR005863 UDP-MurNAc-pentapeptide synthetase CLM98_04625 IPR013221 Mur ligase, central CLM98_04625 IPR035911 CLM98_04625 CLM98_04625 IPR036565 CLM98_04625 CLM98_04625 IPR036615 CLM98_04625 CLM98_04630 IPR000715 Glycosyl transferase, family 4 CLM98_04630 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CLM98_04630 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLM98_04635 IPR001182 Cell cycle protein FtsW/RodA CLM98_04635 IPR013437 Cell division protein FtsW CLM98_04640 IPR004276 Glycosyl transferase, family 28 CLM98_04640 IPR006009 N-acetylglucosaminyltransferase, MurG CLM98_04640 IPR007235 Glycosyl transferase, family 28, C-terminal CLM98_04645 IPR000713 Mur ligase, N-terminal CLM98_04645 IPR004101 Mur ligase, C-terminal CLM98_04645 IPR005758 UDP-N-acetylmuramate-alanine ligase CLM98_04645 IPR013221 Mur ligase, central CLM98_04645 IPR036565 CLM98_04645 CLM98_04645 IPR036615 CLM98_04645 CLM98_04650 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLM98_04650 IPR005905 D-alanine--D-alanine ligase CLM98_04650 IPR011095 D-alanine--D-alanine ligase, C-terminal CLM98_04650 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLM98_04650 IPR013815 ATP-grasp fold, subdomain 1 CLM98_04650 IPR016185 Pre-ATP-grasp domain CLM98_04655 IPR005548 Cell division protein FtsQ/DivIB CLM98_04655 IPR013685 Polypeptide-transport-associated, FtsQ-type CLM98_04655 IPR026579 Cell division protein FtsQ CLM98_04660 IPR003494 SHS2 domain inserted in FtsA CLM98_04660 IPR020823 Cell division protein FtsA CLM98_04665 IPR000158 Cell division protein FtsZ CLM98_04665 IPR003008 Tubulin/FtsZ, GTPase domain CLM98_04665 IPR008280 Tubulin/FtsZ, C-terminal CLM98_04665 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLM98_04665 IPR020805 Cell division protein FtsZ, conserved site CLM98_04665 IPR024757 Cell division protein FtsZ, C-terminal CLM98_04665 IPR036525 CLM98_04665 CLM98_04665 IPR037103 CLM98_04665 CLM98_04670 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CLM98_04670 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CLM98_04670 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CLM98_04670 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_04675 IPR007922 Protein of unknown function DUF721/UPF0232 CLM98_04680 IPR011055 Duplicated hybrid motif CLM98_04680 IPR016047 Peptidase M23 CLM98_04685 IPR000185 Protein translocase subunit SecA CLM98_04685 IPR004027 SEC-C motif CLM98_04685 IPR011115 SecA DEAD-like, N-terminal CLM98_04685 IPR011116 SecA Wing/Scaffold CLM98_04685 IPR011130 SecA preprotein, cross-linking domain CLM98_04685 IPR020937 SecA conserved site CLM98_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04685 IPR036266 CLM98_04685 CLM98_04685 IPR036670 CLM98_04685 CLM98_04690 IPR000086 NUDIX hydrolase domain CLM98_04690 IPR003561 Mutator MutT CLM98_04690 IPR013785 Aldolase-type TIM barrel CLM98_04690 IPR015797 NUDIX hydrolase domain-like CLM98_04690 IPR020084 NUDIX hydrolase, conserved site CLM98_04690 IPR020476 NUDIX hydrolase CLM98_04690 IPR022998 Thiamin phosphate synthase superfamily CLM98_04690 IPR036206 CLM98_04690 CLM98_04700 IPR003171 Methylenetetrahydrofolate reductase CLM98_04700 IPR004620 5,10-methylenetetrahydrofolate reductase CLM98_04700 IPR029041 FAD-linked oxidoreductase-like CLM98_04715 IPR011032 GroES (chaperonin 10)-like CLM98_04715 IPR013154 Alcohol dehydrogenase GroES-like CLM98_04715 IPR014189 Quinone oxidoreductase PIG3 CLM98_04715 IPR020843 Polyketide synthase, enoylreductase CLM98_04715 IPR036291 CLM98_04715 CLM98_04720 IPR000209 Peptidase S8/S53 domain CLM98_04720 IPR015366 Peptidase S53, propeptide CLM98_04720 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_04720 IPR036852 CLM98_04720 CLM98_04730 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_04740 IPR000683 Oxidoreductase, N-terminal CLM98_04740 IPR036291 CLM98_04740 CLM98_04745 IPR006046 Alpha amylase CLM98_04745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_04745 IPR017853 Glycoside hydrolase, superfamily CLM98_04755 IPR018636 Protein of unknown function DUF2058 CLM98_04760 IPR021610 Protein of unknown function DUF3228 CLM98_04765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04775 IPR000863 Sulfotransferase domain CLM98_04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_04785 IPR000043 Adenosylhomocysteinase CLM98_04785 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLM98_04785 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CLM98_04785 IPR034373 CLM98_04785 CLM98_04785 IPR036291 CLM98_04785 CLM98_04790 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_04790 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_04790 IPR029058 Alpha/Beta hydrolase fold CLM98_04795 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_04795 IPR018129 Phosphoenolpyruvate carboxylase, active site CLM98_04795 IPR021135 Phosphoenolpyruvate carboxylase CLM98_04795 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CLM98_04795 IPR033129 CLM98_04795 CLM98_04800 IPR001647 DNA-binding HTH domain, TetR-type CLM98_04800 IPR009057 Homeodomain-like CLM98_04800 IPR036271 CLM98_04800 CLM98_04805 IPR025178 Domain of unknown function DUF4105 CLM98_04810 IPR029058 Alpha/Beta hydrolase fold CLM98_04825 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04825 IPR010104 Bacterial TonB-dependent receptor CLM98_04825 IPR012910 TonB-dependent receptor, plug CLM98_04825 IPR037066 CLM98_04825 CLM98_04830 IPR000560 Histidine phosphatase superfamily, clade-2 CLM98_04830 IPR029033 Histidine phosphatase superfamily CLM98_04830 IPR033379 CLM98_04830 CLM98_04840 IPR002133 S-adenosylmethionine synthetase CLM98_04840 IPR022628 S-adenosylmethionine synthetase, N-terminal CLM98_04840 IPR022629 S-adenosylmethionine synthetase, central domain CLM98_04840 IPR022630 S-adenosylmethionine synthetase, C-terminal CLM98_04840 IPR022631 S-adenosylmethionine synthetase, conserved site CLM98_04840 IPR022636 S-adenosylmethionine synthetase superfamily CLM98_04845 IPR007404 Protein of unknown function DUF457 CLM98_04850 IPR013216 Methyltransferase type 11 CLM98_04850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_04855 IPR001269 tRNA-dihydrouridine synthase CLM98_04855 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CLM98_04855 IPR013785 Aldolase-type TIM barrel CLM98_04855 IPR018517 tRNA-dihydrouridine synthase, conserved site CLM98_04855 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CLM98_04855 IPR032887 CLM98_04855 CLM98_04860 IPR005084 Carbohydrate binding module family 6 CLM98_04860 IPR008979 Galactose-binding domain-like CLM98_04860 IPR011071 Polysaccharide lyase family 8-like, C-terminal CLM98_04860 IPR013190 Glycosyl hydrolase family 98, C-terminal domain CLM98_04860 IPR013191 Glycosyl hydrolase family 98 CLM98_04865 IPR002139 Ribokinase CLM98_04865 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_04865 IPR011611 Carbohydrate kinase PfkB CLM98_04865 IPR011877 Ribokinase, bacterial CLM98_04865 IPR029056 Ribokinase-like CLM98_04870 IPR002668 Concentrative nucleoside transporter N-terminal domain CLM98_04870 IPR011642 Nucleoside recognition Gate CLM98_04870 IPR011657 Concentrative nucleoside transporter C-terminal domain CLM98_04880 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related CLM98_04880 IPR023210 NADP-dependent oxidoreductase domain CLM98_04880 IPR036812 CLM98_04880 CLM98_04885 IPR019600 Hemin uptake protein HemP CLM98_04890 IPR000531 TonB-dependent receptor, beta-barrel CLM98_04890 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CLM98_04890 IPR011276 TonB-dependent haem/haemoglobin receptor CLM98_04890 IPR012910 TonB-dependent receptor, plug CLM98_04890 IPR036942 CLM98_04890 CLM98_04890 IPR037066 CLM98_04890 CLM98_04905 IPR007437 Protein of unknown function DUF486 CLM98_04910 IPR000515 MetI-like domain CLM98_04910 IPR035906 CLM98_04910 CLM98_04915 IPR003439 ABC transporter-like CLM98_04915 IPR003593 AAA+ ATPase domain CLM98_04915 IPR017871 ABC transporter, conserved site CLM98_04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04925 IPR003819 Taurine catabolism dioxygenase TauD/TfdA CLM98_04930 IPR003838 Permease FtsX-like CLM98_04935 IPR003439 ABC transporter-like CLM98_04935 IPR003593 AAA+ ATPase domain CLM98_04935 IPR017871 ABC transporter, conserved site CLM98_04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_04940 IPR013830 CLM98_04940 CLM98_04940 IPR036514 CLM98_04940 CLM98_04945 IPR001789 Signal transduction response regulator, receiver domain CLM98_04945 IPR001867 Signal transduction response regulator, C-terminal CLM98_04945 IPR011006 CheY-like superfamily CLM98_04945 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_04945 IPR036388 CLM98_04945 CLM98_04950 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_04950 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_04950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_04950 IPR036097 CLM98_04950 CLM98_04950 IPR036890 CLM98_04950 CLM98_04960 IPR013830 CLM98_04960 CLM98_04960 IPR036514 CLM98_04960 CLM98_04965 IPR000829 Diacylglycerol kinase, prokaryotic CLM98_04965 IPR036945 CLM98_04965 CLM98_04970 IPR007156 LemA CLM98_04970 IPR023353 LemA-like domain CLM98_04975 IPR007621 TPM domain CLM98_04980 IPR007621 TPM domain CLM98_04985 IPR001640 Prolipoprotein diacylglyceryl transferase CLM98_04990 IPR000398 Thymidylate synthase CLM98_04990 IPR020940 Thymidylate synthase, active site CLM98_04990 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CLM98_04990 IPR036926 CLM98_04990 CLM98_05000 IPR001796 Dihydrofolate reductase domain CLM98_05000 IPR012259 Dihydrofolate reductase CLM98_05000 IPR017925 Dihydrofolate reductase conserved site CLM98_05000 IPR024072 Dihydrofolate reductase-like domain CLM98_05005 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_05005 IPR003593 AAA+ ATPase domain CLM98_05005 IPR009057 Homeodomain-like CLM98_05005 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_05005 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_05005 IPR025944 Sigma-54 interaction domain, conserved site CLM98_05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_05010 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLM98_05010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_05010 IPR036250 CLM98_05010 CLM98_05010 IPR037069 CLM98_05010 CLM98_05015 IPR003439 ABC transporter-like CLM98_05015 IPR003593 AAA+ ATPase domain CLM98_05015 IPR017871 ABC transporter, conserved site CLM98_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05020 IPR000515 MetI-like domain CLM98_05020 IPR035906 CLM98_05020 CLM98_05025 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates CLM98_05025 IPR015168 SsuA/THI5-like CLM98_05030 IPR011251 Luciferase-like domain CLM98_05030 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CLM98_05030 IPR036661 CLM98_05030 CLM98_05035 IPR005025 NADPH-dependent FMN reductase-like CLM98_05035 IPR019912 FMN reductase, MsuE-like CLM98_05035 IPR029039 Flavoprotein-like CLM98_05040 IPR000531 TonB-dependent receptor, beta-barrel CLM98_05040 IPR012910 TonB-dependent receptor, plug CLM98_05040 IPR036942 CLM98_05040 CLM98_05040 IPR037066 CLM98_05040 CLM98_05050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_05050 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLM98_05050 IPR036250 CLM98_05050 CLM98_05050 IPR037069 CLM98_05050 CLM98_05055 IPR011251 Luciferase-like domain CLM98_05055 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CLM98_05055 IPR036661 CLM98_05055 CLM98_05060 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLM98_05060 IPR030678 CLM98_05060 CLM98_05065 IPR000515 MetI-like domain CLM98_05065 IPR035906 CLM98_05065 CLM98_05070 IPR000515 MetI-like domain CLM98_05070 IPR035906 CLM98_05070 CLM98_05075 IPR003439 ABC transporter-like CLM98_05075 IPR003593 AAA+ ATPase domain CLM98_05075 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLM98_05075 IPR017871 ABC transporter, conserved site CLM98_05075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05080 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CLM98_05080 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLM98_05080 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CLM98_05080 IPR029052 Metallo-dependent phosphatase-like CLM98_05085 IPR007474 ApaG domain CLM98_05085 IPR023065 Uncharacterised protein family ApaG CLM98_05085 IPR036767 CLM98_05085 CLM98_05090 IPR001737 Ribosomal RNA adenine methylase transferase CLM98_05090 IPR011530 Ribosomal RNA adenine dimethylase CLM98_05090 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLM98_05090 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CLM98_05090 IPR023165 rRNA adenine dimethylase-like CLM98_05090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_05095 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CLM98_05095 IPR037510 CLM98_05095 CLM98_05100 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLM98_05100 IPR015391 SurA N-terminal CLM98_05100 IPR023034 Peptidyl-prolyl isomerase SurA CLM98_05100 IPR027304 Trigger factor/SurA domain CLM98_05105 IPR005653 Organic solvent tolerance-like, N-terminal CLM98_05105 IPR007543 Organic solvent tolerance protein, C-terminal CLM98_05105 IPR020889 Lipopolysaccharide assembly, LptD CLM98_05110 IPR023696 Ureohydrolase domain CLM98_05110 IPR023801 Histone deacetylase domain CLM98_05110 IPR037138 CLM98_05110 CLM98_05115 IPR001480 Bulb-type lectin domain CLM98_05115 IPR036426 CLM98_05115 CLM98_05120 IPR000286 Histone deacetylase superfamily CLM98_05120 IPR023696 Ureohydrolase domain CLM98_05120 IPR023801 Histone deacetylase domain CLM98_05120 IPR037138 CLM98_05120 CLM98_05125 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like CLM98_05125 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CLM98_05125 IPR036451 CLM98_05125 CLM98_05140 IPR002938 Monooxygenase, FAD-binding CLM98_05140 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CLM98_05140 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CLM98_05140 IPR036188 CLM98_05140 CLM98_05145 IPR002938 Monooxygenase, FAD-binding CLM98_05145 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CLM98_05145 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CLM98_05145 IPR036188 CLM98_05145 CLM98_05150 IPR000073 Alpha/beta hydrolase fold-1 CLM98_05150 IPR029058 Alpha/Beta hydrolase fold CLM98_05155 IPR032710 CLM98_05155 CLM98_05155 IPR037401 CLM98_05155 CLM98_05160 IPR025737 MetA-pathway of phenol degradation, putative CLM98_05165 IPR000524 Transcription regulator HTH, GntR CLM98_05165 IPR008920 Transcription regulator FadR/GntR, C-terminal CLM98_05165 IPR011711 GntR, C-terminal CLM98_05165 IPR036388 CLM98_05165 CLM98_05165 IPR036390 CLM98_05165 CLM98_05170 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLM98_05175 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CLM98_05175 IPR036622 CLM98_05175 CLM98_05180 IPR000847 Transcription regulator HTH, LysR CLM98_05180 IPR005119 LysR, substrate-binding CLM98_05180 IPR036388 CLM98_05180 CLM98_05180 IPR036390 CLM98_05180 CLM98_05185 IPR000873 AMP-dependent synthetase/ligase CLM98_05185 IPR020845 AMP-binding, conserved site CLM98_05185 IPR025110 AMP-binding enzyme C-terminal domain CLM98_05190 IPR015590 Aldehyde dehydrogenase domain CLM98_05190 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_05190 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_05190 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_05190 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_05195 IPR001753 Crotonase superfamily CLM98_05195 IPR029045 ClpP/crotonase-like domain CLM98_05200 IPR000835 MarR-type HTH domain CLM98_05200 IPR036388 CLM98_05200 CLM98_05200 IPR036390 CLM98_05200 CLM98_05205 IPR002048 EF-hand domain CLM98_05205 IPR011992 EF-hand domain pair CLM98_05215 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_05215 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_05220 IPR000683 Oxidoreductase, N-terminal CLM98_05220 IPR008354 Glucose-fructose oxidoreductase, bacterial CLM98_05220 IPR036291 CLM98_05220 CLM98_05230 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLM98_05230 IPR011224 Ribosomal RNA large subunit methyltransferase M CLM98_05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_05235 IPR002125 CMP/dCMP deaminase, zinc-binding CLM98_05235 IPR016193 Cytidine deaminase-like CLM98_05265 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_05265 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_05265 IPR004514 Glutamine-tRNA synthetase CLM98_05265 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CLM98_05265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_05265 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CLM98_05265 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_05265 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CLM98_05265 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain CLM98_05265 IPR022861 Glutamine-tRNA ligase, bacterial CLM98_05270 IPR004045 Glutathione S-transferase, N-terminal CLM98_05270 IPR036249 CLM98_05270 CLM98_05270 IPR036282 CLM98_05270 CLM98_05275 IPR018551 Domain of unknown function DUF2007 CLM98_05280 IPR001789 Signal transduction response regulator, receiver domain CLM98_05280 IPR011006 CheY-like superfamily CLM98_05285 IPR001789 Signal transduction response regulator, receiver domain CLM98_05285 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_05285 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_05285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_05285 IPR007891 CHASE3 CLM98_05285 IPR011006 CheY-like superfamily CLM98_05285 IPR036097 CLM98_05285 CLM98_05285 IPR036890 CLM98_05285 CLM98_05290 IPR000792 Transcription regulator LuxR, C-terminal CLM98_05290 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_05290 IPR029016 GAF domain-like CLM98_05290 IPR036388 CLM98_05290 CLM98_05295 IPR011944 Steroid delta5-4-isomerase CLM98_05295 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain CLM98_05295 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related CLM98_05295 IPR032710 CLM98_05295 CLM98_05300 IPR002569 Peptide methionine sulphoxide reductase MsrA CLM98_05300 IPR036509 CLM98_05300 CLM98_05305 IPR002818 ThiJ/PfpI CLM98_05305 IPR029062 Class I glutamine amidotransferase-like CLM98_05310 IPR001585 Transaldolase CLM98_05310 IPR004730 Transaldolase type 1 CLM98_05310 IPR013785 Aldolase-type TIM barrel CLM98_05310 IPR018225 Transaldolase, active site CLM98_05315 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_05315 IPR023459 Transcription elongation factor GreA/GreB family CLM98_05315 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CLM98_05315 IPR036953 CLM98_05315 CLM98_05325 IPR000847 Transcription regulator HTH, LysR CLM98_05325 IPR005119 LysR, substrate-binding CLM98_05325 IPR036388 CLM98_05325 CLM98_05325 IPR036390 CLM98_05325 CLM98_05330 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLM98_05330 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLM98_05330 IPR012081 Alkyl hydroperoxide reductase subunit F CLM98_05330 IPR012336 Thioredoxin-like fold CLM98_05330 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_05330 IPR036188 CLM98_05330 CLM98_05330 IPR036249 CLM98_05330 CLM98_05335 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_05335 IPR017559 Alkyl hydroperoxide reductase subunit C CLM98_05335 IPR019479 Peroxiredoxin, C-terminal CLM98_05335 IPR024706 Peroxiredoxin, AhpC-type CLM98_05335 IPR036249 CLM98_05335 CLM98_05340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_05340 IPR004556 Modification methylase HemK CLM98_05340 IPR007848 Methyltransferase small domain CLM98_05340 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CLM98_05340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_05345 IPR000073 Alpha/beta hydrolase fold-1 CLM98_05345 IPR002410 Peptidase S33 CLM98_05345 IPR005944 Proline iminopeptidase CLM98_05345 IPR029058 Alpha/Beta hydrolase fold CLM98_05350 IPR007709 N-formylglutamate amidohydrolase CLM98_05350 IPR011227 Uncharacterised conserved protein UCP029730 CLM98_05355 IPR000086 NUDIX hydrolase domain CLM98_05355 IPR015797 NUDIX hydrolase domain-like CLM98_05360 IPR002421 5'-3' exonuclease, N-terminal CLM98_05360 IPR008918 Helix-hairpin-helix motif, class 2 CLM98_05360 IPR020045 5'-3' exonuclease, C-terminal domain CLM98_05360 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLM98_05360 IPR029060 PIN domain-like CLM98_05360 IPR036279 CLM98_05360 CLM98_05365 IPR000415 Nitroreductase-like CLM98_05365 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CLM98_05365 IPR029479 Nitroreductase CLM98_05370 IPR012434 Protein of unknown function DUF1631 CLM98_05375 IPR012434 Protein of unknown function DUF1631 CLM98_05380 IPR022742 Putative lysophospholipase CLM98_05380 IPR029058 Alpha/Beta hydrolase fold CLM98_05385 IPR001647 DNA-binding HTH domain, TetR-type CLM98_05385 IPR009057 Homeodomain-like CLM98_05385 IPR025996 WHG domain CLM98_05385 IPR036271 CLM98_05385 CLM98_05390 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLM98_05390 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLM98_05390 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CLM98_05390 IPR036291 CLM98_05390 CLM98_05395 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLM98_05400 IPR021455 Protein of unknown function DUF3106 CLM98_05410 IPR007627 RNA polymerase sigma-70 region 2 CLM98_05410 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_05410 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_05410 IPR013325 RNA polymerase sigma factor, region 2 CLM98_05410 IPR014284 RNA polymerase sigma-70 like domain CLM98_05410 IPR036388 CLM98_05410 CLM98_05415 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CLM98_05420 IPR012136 NADP transhydrogenase, beta subunit CLM98_05420 IPR029035 DHS-like NAD/FAD-binding domain CLM98_05420 IPR034300 CLM98_05420 CLM98_05430 IPR002744 Domain of unknown function DUF59 CLM98_05430 IPR017776 FeS assembly SUF system protein SufT, putative CLM98_05430 IPR034904 CLM98_05430 CLM98_05435 IPR001544 Aminotransferase, class IV CLM98_05435 IPR005786 Branched-chain amino acid aminotransferase II CLM98_05435 IPR018300 Aminotransferase, class IV, conserved site CLM98_05435 IPR036038 CLM98_05435 CLM98_05440 IPR000209 Peptidase S8/S53 domain CLM98_05440 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_05440 IPR015500 Peptidase S8, subtilisin-related CLM98_05440 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_05440 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_05440 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_05440 IPR036852 CLM98_05440 CLM98_05450 IPR000209 Peptidase S8/S53 domain CLM98_05450 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_05450 IPR015500 Peptidase S8, subtilisin-related CLM98_05450 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_05450 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_05450 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_05450 IPR036852 CLM98_05450 CLM98_05455 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLM98_05455 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLM98_05455 IPR036754 CLM98_05455 CLM98_05460 IPR006034 Asparaginase/glutaminase CLM98_05460 IPR027474 L-asparaginase, N-terminal CLM98_05460 IPR036152 CLM98_05460 CLM98_05460 IPR037152 CLM98_05460 CLM98_05470 IPR018643 Protein of unknown function DUF2069, membrane CLM98_05475 IPR005025 NADPH-dependent FMN reductase-like CLM98_05475 IPR010089 Flavoprotein WrbA CLM98_05475 IPR029039 Flavoprotein-like CLM98_05480 IPR017039 Virulence factor BrkB CLM98_05480 IPR023679 Uncharacterised protein family UPF0761, bacterial CLM98_05485 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_05485 IPR017937 Thioredoxin, conserved site CLM98_05485 IPR036249 CLM98_05485 CLM98_05500 IPR016898 Polyphosphate kinase 2 CLM98_05500 IPR022486 Polyphosphate kinase 2, PA0141 CLM98_05500 IPR022488 Polyphosphate kinase-2-related CLM98_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05505 IPR001453 Molybdopterin binding domain CLM98_05505 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CLM98_05505 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria CLM98_05505 IPR036425 CLM98_05505 CLM98_05510 IPR011990 Tetratricopeptide-like helical domain CLM98_05510 IPR019734 Tetratricopeptide repeat CLM98_05510 IPR029489 O-GlcNAc transferase, C-terminal CLM98_05515 IPR000352 Peptide chain release factor class I/class II CLM98_05515 IPR004373 Peptide chain release factor 1 CLM98_05515 IPR005139 Peptide chain release factor CLM98_05525 IPR011990 Tetratricopeptide-like helical domain CLM98_05525 IPR019734 Tetratricopeptide repeat CLM98_05530 IPR004565 Outer membrane lipoprotein LolB CLM98_05530 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLM98_05535 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CLM98_05535 IPR006204 GHMP kinase N-terminal domain CLM98_05535 IPR013750 GHMP kinase, C-terminal domain CLM98_05535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05535 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05535 IPR036554 CLM98_05535 CLM98_05545 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CLM98_05545 IPR005946 Ribose-phosphate diphosphokinase CLM98_05545 IPR029057 Phosphoribosyltransferase-like CLM98_05545 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CLM98_05545 IPR037515 CLM98_05545 CLM98_05550 IPR001021 Ribosomal protein L25, long-form CLM98_05550 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CLM98_05550 IPR020055 Ribosomal protein L25, short-form CLM98_05550 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CLM98_05550 IPR020057 Ribosomal protein L25, beta domain CLM98_05550 IPR029751 Ribosomal protein L25 CLM98_05550 IPR037121 CLM98_05550 CLM98_05555 IPR001328 Peptidyl-tRNA hydrolase CLM98_05555 IPR018171 Peptidyl-tRNA hydrolase, conserved site CLM98_05555 IPR036416 CLM98_05555 CLM98_05560 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CLM98_05560 IPR006073 GTP binding domain CLM98_05560 IPR012675 Beta-grasp domain CLM98_05560 IPR012676 TGS-like CLM98_05560 IPR013029 Domain of unknown function DUF933 CLM98_05560 IPR023192 TGS-like domain CLM98_05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05580 IPR000795 Elongation factor, GTP-binding domain CLM98_05580 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLM98_05580 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLM98_05580 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLM98_05580 IPR005225 Small GTP-binding protein domain CLM98_05580 IPR009000 Translation protein, beta-barrel domain CLM98_05580 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05580 IPR031157 CLM98_05580 CLM98_05590 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CLM98_05590 IPR005807 SecE subunit of protein translocation complex CLM98_05590 IPR038379 CLM98_05590 CLM98_05595 IPR001062 Transcription antitermination protein, NusG CLM98_05595 IPR005824 KOW CLM98_05595 IPR006645 NusG, N-terminal CLM98_05595 IPR008991 Translation protein SH3-like domain CLM98_05595 IPR014722 Ribosomal protein L2 domain 2 CLM98_05595 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLM98_05595 IPR036735 CLM98_05595 CLM98_05600 IPR000911 Ribosomal protein L11/L12 CLM98_05600 IPR006519 Ribosomal protein L11, bacterial-type CLM98_05600 IPR020783 Ribosomal protein L11, C-terminal CLM98_05600 IPR020784 Ribosomal protein L11, N-terminal CLM98_05600 IPR020785 Ribosomal protein L11, conserved site CLM98_05600 IPR036769 CLM98_05600 CLM98_05600 IPR036796 CLM98_05600 CLM98_05605 IPR002143 Ribosomal protein L1 CLM98_05605 IPR005878 Ribosomal protein L1, bacterial-type CLM98_05605 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLM98_05605 IPR023673 Ribosomal protein L1, conserved site CLM98_05605 IPR023674 Ribosomal protein L1-like CLM98_05605 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLM98_05610 IPR001790 Ribosomal protein L10/acidic P0 CLM98_05610 IPR022973 Ribosomal protein L10 CLM98_05615 IPR000206 Ribosomal protein L7/L12 CLM98_05615 IPR008932 Ribosomal protein L7/L12, oligomerisation CLM98_05615 IPR013823 Ribosomal protein L7/L12, C-terminal CLM98_05615 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLM98_05615 IPR036235 CLM98_05615 CLM98_05620 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 CLM98_05620 IPR007121 RNA polymerase, beta subunit, conserved site CLM98_05620 IPR007641 RNA polymerase Rpb2, domain 7 CLM98_05620 IPR007642 RNA polymerase Rpb2, domain 2 CLM98_05620 IPR007644 RNA polymerase, beta subunit, protrusion CLM98_05620 IPR007645 RNA polymerase Rpb2, domain 3 CLM98_05620 IPR010243 DNA-directed RNA polymerase, beta subunit CLM98_05620 IPR014724 RNA polymerase Rpb2, OB-fold CLM98_05620 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CLM98_05620 IPR037033 CLM98_05620 CLM98_05620 IPR037034 CLM98_05620 CLM98_05625 IPR000722 RNA polymerase, alpha subunit CLM98_05625 IPR006592 RNA polymerase, N-terminal CLM98_05625 IPR007066 RNA polymerase Rpb1, domain 3 CLM98_05625 IPR007080 RNA polymerase Rpb1, domain 1 CLM98_05625 IPR007081 RNA polymerase Rpb1, domain 5 CLM98_05625 IPR007083 RNA polymerase Rpb1, domain 4 CLM98_05625 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CLM98_05625 IPR038120 CLM98_05625 CLM98_05630 IPR005679 Ribosomal protein S12, bacteria CLM98_05630 IPR006032 Ribosomal protein S12/S23 CLM98_05630 IPR012340 Nucleic acid-binding, OB-fold CLM98_05635 IPR000235 Ribosomal protein S5/S7 CLM98_05635 IPR005717 Ribosomal protein S7, bacterial/organellar-type CLM98_05635 IPR020606 Ribosomal protein S7, conserved site CLM98_05635 IPR023798 Ribosomal protein S7 domain CLM98_05635 IPR036823 CLM98_05635 CLM98_05640 IPR000640 Translation elongation factor EFG, V domain CLM98_05640 IPR000795 Elongation factor, GTP-binding domain CLM98_05640 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLM98_05640 IPR004540 Translation elongation factor EFG/EF2 CLM98_05640 IPR005225 Small GTP-binding protein domain CLM98_05640 IPR005517 Translation elongation factor EFG/EF2, domain IV CLM98_05640 IPR009000 Translation protein, beta-barrel domain CLM98_05640 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05640 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05640 IPR031157 CLM98_05640 CLM98_05640 IPR035647 CLM98_05640 CLM98_05645 IPR000795 Elongation factor, GTP-binding domain CLM98_05645 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLM98_05645 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLM98_05645 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLM98_05645 IPR005225 Small GTP-binding protein domain CLM98_05645 IPR009000 Translation protein, beta-barrel domain CLM98_05645 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05645 IPR031157 CLM98_05645 CLM98_05650 IPR001848 Ribosomal protein S10 CLM98_05650 IPR018268 Ribosomal protein S10, conserved site CLM98_05650 IPR027486 Ribosomal protein S10 domain CLM98_05650 IPR036838 CLM98_05650 CLM98_05655 IPR000597 Ribosomal protein L3 CLM98_05655 IPR009000 Translation protein, beta-barrel domain CLM98_05655 IPR019926 Ribosomal protein L3, conserved site CLM98_05655 IPR019927 Ribosomal protein L3, bacterial/organelle-type CLM98_05660 IPR002136 Ribosomal protein L4/L1e CLM98_05660 IPR013005 Ribosomal protein L4/L1e, bacterial-type CLM98_05660 IPR023574 Ribosomal protein L4 domain CLM98_05665 IPR012677 Nucleotide-binding, alpha-beta plait CLM98_05665 IPR012678 Ribosomal protein L23/L15e core domain CLM98_05665 IPR013025 Ribosomal protein L25/L23 CLM98_05670 IPR002171 Ribosomal protein L2 CLM98_05670 IPR005880 Ribosomal protein L2, bacterial/organellar-type CLM98_05670 IPR008991 Translation protein SH3-like domain CLM98_05670 IPR012340 Nucleic acid-binding, OB-fold CLM98_05670 IPR014722 Ribosomal protein L2 domain 2 CLM98_05670 IPR014726 Ribosomal protein L2, domain 3 CLM98_05670 IPR022666 Ribosomal Proteins L2, RNA binding domain CLM98_05670 IPR022669 Ribosomal protein L2, C-terminal CLM98_05670 IPR022671 Ribosomal protein L2, conserved site CLM98_05675 IPR002222 Ribosomal protein S19/S15 CLM98_05675 IPR005732 Ribosomal protein S19, bacterial-type CLM98_05675 IPR020934 Ribosomal protein S19 conserved site CLM98_05675 IPR023575 Ribosomal protein S19, superfamily CLM98_05680 IPR001063 Ribosomal protein L22/L17 CLM98_05680 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CLM98_05680 IPR018260 Ribosomal protein L22/L17, conserved site CLM98_05680 IPR036394 CLM98_05680 CLM98_05685 IPR001351 Ribosomal protein S3, C-terminal CLM98_05685 IPR004044 K Homology domain, type 2 CLM98_05685 IPR004087 K Homology domain CLM98_05685 IPR005704 Ribosomal protein S3, bacterial CLM98_05685 IPR009019 K homology domain, prokaryotic type CLM98_05685 IPR015946 K homology domain-like, alpha/beta CLM98_05685 IPR018280 Ribosomal protein S3, conserved site CLM98_05685 IPR036419 CLM98_05685 CLM98_05690 IPR000114 Ribosomal protein L16 CLM98_05690 IPR016180 Ribosomal protein L10e/L16 CLM98_05690 IPR020798 Ribosomal protein L16, conserved site CLM98_05690 IPR036920 CLM98_05690 CLM98_05695 IPR001854 Ribosomal protein L29 CLM98_05695 IPR036049 CLM98_05695 CLM98_05700 IPR000266 Ribosomal protein S17 CLM98_05700 IPR012340 Nucleic acid-binding, OB-fold CLM98_05700 IPR019984 Ribosomal protein S17, bacterial-type CLM98_05705 IPR000218 Ribosomal protein L14b/L23e CLM98_05705 IPR005745 Ribosomal protein L14, bacterial-type CLM98_05705 IPR019972 Ribosomal protein L14 conserved site CLM98_05705 IPR036853 CLM98_05705 CLM98_05710 IPR003256 Ribosomal protein L24 CLM98_05710 IPR005824 KOW CLM98_05710 IPR008991 Translation protein SH3-like domain CLM98_05710 IPR014722 Ribosomal protein L2 domain 2 CLM98_05715 IPR002132 Ribosomal protein L5 CLM98_05715 IPR020929 Ribosomal protein L5, conserved site CLM98_05715 IPR020930 Ribosomal protein L5, bacterial-type CLM98_05715 IPR022803 Ribosomal protein L5 domain CLM98_05715 IPR031309 CLM98_05715 CLM98_05715 IPR031310 CLM98_05715 CLM98_05720 IPR001209 Ribosomal protein S14 CLM98_05720 IPR023036 Ribosomal protein S14, bacterial/plastid CLM98_05725 IPR000630 Ribosomal protein S8 CLM98_05725 IPR035987 CLM98_05725 CLM98_05730 IPR000702 Ribosomal protein L6 CLM98_05730 IPR002358 Ribosomal protein L6, conserved site CLM98_05730 IPR019906 Ribosomal protein L6, bacterial-type CLM98_05730 IPR020040 Ribosomal protein L6, alpha-beta domain CLM98_05730 IPR036789 CLM98_05730 CLM98_05735 IPR004389 Ribosomal protein L18, bacterial-type CLM98_05735 IPR005484 Ribosomal protein L18/L5 CLM98_05740 IPR005324 Ribosomal protein S5, C-terminal CLM98_05740 IPR005712 Ribosomal protein S5, bacterial-type CLM98_05740 IPR013810 Ribosomal protein S5, N-terminal CLM98_05740 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_05740 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLM98_05740 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_05745 IPR005996 Ribosomal protein L30, bacterial-type CLM98_05745 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLM98_05745 IPR036919 CLM98_05745 CLM98_05750 IPR001196 Ribosomal protein L15, conserved site CLM98_05750 IPR005749 Ribosomal protein L15, bacterial-type CLM98_05750 IPR021131 Ribosomal protein L18e/L15P CLM98_05750 IPR030878 CLM98_05750 CLM98_05750 IPR036227 CLM98_05750 CLM98_05755 IPR002208 SecY/SEC61-alpha family CLM98_05755 IPR023201 SecY subunit domain CLM98_05755 IPR026593 Protein translocase subunit SecY CLM98_05755 IPR030659 CLM98_05755 CLM98_05760 IPR001892 Ribosomal protein S13 CLM98_05760 IPR010979 Ribosomal protein S13-like, H2TH CLM98_05760 IPR018269 Ribosomal protein S13, conserved site CLM98_05760 IPR019980 Ribosomal protein S13, bacterial-type CLM98_05760 IPR027437 30s ribosomal protein S13, C-terminal CLM98_05765 IPR001971 Ribosomal protein S11 CLM98_05765 IPR018102 Ribosomal S11, conserved site CLM98_05765 IPR019981 Ribosomal protein S11, bacterial-type CLM98_05765 IPR036967 CLM98_05765 CLM98_05770 IPR001912 Ribosomal protein S4/S9, N-terminal CLM98_05770 IPR002942 RNA-binding S4 domain CLM98_05770 IPR005709 Ribosomal protein S4, bacterial-type CLM98_05770 IPR018079 Ribosomal protein S4, conserved site CLM98_05770 IPR036986 CLM98_05770 CLM98_05775 IPR011260 RNA polymerase, alpha subunit, C-terminal CLM98_05775 IPR011262 DNA-directed RNA polymerase, insert domain CLM98_05775 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CLM98_05775 IPR011773 DNA-directed RNA polymerase, alpha subunit CLM98_05775 IPR036603 CLM98_05775 CLM98_05775 IPR036643 CLM98_05775 CLM98_05780 IPR000456 Ribosomal protein L17 CLM98_05780 IPR036373 CLM98_05780 CLM98_05785 IPR003752 Disulphide bond formation protein DsbB/BdbC CLM98_05785 IPR022920 Disulphide bond formation protein DsbB CLM98_05785 IPR023380 Disulphide bond formation protein DsbB-like domain CLM98_05805 IPR002480 DAHP synthetase, class II CLM98_05805 IPR013785 Aldolase-type TIM barrel CLM98_05810 IPR006685 Mechanosensitive ion channel MscS CLM98_05810 IPR010920 Like-Sm (LSM) domain CLM98_05815 IPR023631 Amidase signature domain CLM98_05815 IPR036928 CLM98_05815 CLM98_05820 IPR021125 Protein of unknown function DUF2127 CLM98_05825 IPR000640 Translation elongation factor EFG, V domain CLM98_05825 IPR000795 Elongation factor, GTP-binding domain CLM98_05825 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLM98_05825 IPR005225 Small GTP-binding protein domain CLM98_05825 IPR006298 GTP-binding protein TypA CLM98_05825 IPR009000 Translation protein, beta-barrel domain CLM98_05825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05825 IPR031157 CLM98_05825 CLM98_05825 IPR035647 CLM98_05825 CLM98_05830 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLM98_05830 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CLM98_05830 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CLM98_05830 IPR029000 Cyclophilin-like domain CLM98_05835 IPR001236 Lactate/malate dehydrogenase, N-terminal CLM98_05835 IPR001557 L-lactate/malate dehydrogenase CLM98_05835 IPR010945 Malate dehydrogenase, type 2 CLM98_05835 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLM98_05835 IPR022383 Lactate/malate dehydrogenase, C-terminal CLM98_05835 IPR036291 CLM98_05835 CLM98_05840 IPR004045 Glutathione S-transferase, N-terminal CLM98_05840 IPR004046 Glutathione S-transferase, C-terminal CLM98_05840 IPR036249 CLM98_05840 CLM98_05840 IPR036282 CLM98_05840 CLM98_05845 IPR011105 Cell wall hydrolase, SleB CLM98_05860 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_05860 IPR013785 Aldolase-type TIM barrel CLM98_05860 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_05860 IPR036188 CLM98_05860 CLM98_05865 IPR011032 GroES (chaperonin 10)-like CLM98_05865 IPR013154 Alcohol dehydrogenase GroES-like CLM98_05865 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CLM98_05865 IPR020843 Polyketide synthase, enoylreductase CLM98_05865 IPR036291 CLM98_05865 CLM98_05875 IPR006664 Outer membrane protein, bacterial CLM98_05875 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_05875 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_05875 IPR027385 Outer membrane protein beta-barrel CLM98_05875 IPR028974 TSP type-3 repeat CLM98_05875 IPR036737 CLM98_05875 CLM98_05885 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_05885 IPR002942 RNA-binding S4 domain CLM98_05885 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_05885 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_05885 IPR020103 Pseudouridine synthase, catalytic domain CLM98_05885 IPR036986 CLM98_05885 CLM98_05895 IPR004839 Aminotransferase, class I/classII CLM98_05895 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CLM98_05895 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_05895 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_05895 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_05900 IPR005669 Thiosulphate/Sulfate-binding protein CLM98_05900 IPR034408 CLM98_05900 CLM98_05905 IPR000515 MetI-like domain CLM98_05905 IPR005667 Sulphate ABC transporter permease protein 2 CLM98_05905 IPR011865 Sulphate ABC transporter, permease protein CysT CLM98_05905 IPR035906 CLM98_05905 CLM98_05910 IPR000515 MetI-like domain CLM98_05910 IPR005667 Sulphate ABC transporter permease protein 2 CLM98_05910 IPR011866 Sulphate ABC transporter, permease protein CysW CLM98_05910 IPR035906 CLM98_05910 CLM98_05915 IPR003439 ABC transporter-like CLM98_05915 IPR003593 AAA+ ATPase domain CLM98_05915 IPR005666 Sulphate transport system permease protein 1 CLM98_05915 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_05915 IPR017871 ABC transporter, conserved site CLM98_05915 IPR024765 TOBE-like domain CLM98_05915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_05920 IPR010239 Conserved hypothetical protein CHP02001 CLM98_05925 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_05925 IPR004627 L-threonine 3-dehydrogenase CLM98_05925 IPR011032 GroES (chaperonin 10)-like CLM98_05925 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_05925 IPR013154 Alcohol dehydrogenase GroES-like CLM98_05925 IPR020843 Polyketide synthase, enoylreductase CLM98_05925 IPR036291 CLM98_05925 CLM98_05940 IPR000531 TonB-dependent receptor, beta-barrel CLM98_05940 IPR010917 TonB-dependent receptor, conserved site CLM98_05940 IPR012910 TonB-dependent receptor, plug CLM98_05940 IPR037066 CLM98_05940 CLM98_05945 IPR007312 Phosphoesterase CLM98_05945 IPR008475 Bacterial phospholipase C, C-terminal domain CLM98_05945 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLM98_05945 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLM98_05945 IPR017850 Alkaline-phosphatase-like, core domain CLM98_05945 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_05955 IPR019500 Peptidase S46 CLM98_05960 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLM98_05960 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_05960 IPR029033 Histidine phosphatase superfamily CLM98_05965 IPR001645 Folylpolyglutamate synthetase CLM98_05965 IPR013221 Mur ligase, central CLM98_05965 IPR036565 CLM98_05965 CLM98_05965 IPR036615 CLM98_05965 CLM98_05970 IPR007730 Sporulation-related domain CLM98_05970 IPR036680 CLM98_05970 CLM98_05975 IPR003825 Colicin V production, CvpA CLM98_05980 IPR005854 Amidophosphoribosyl transferase CLM98_05980 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_05980 IPR029057 Phosphoribosyltransferase-like CLM98_05985 IPR007402 Protein of unknown function DUF455 CLM98_05985 IPR009078 Ferritin-like superfamily CLM98_05985 IPR011197 Uncharacterised conserved protein UCP012318 CLM98_05995 IPR024079 Metallopeptidase, catalytic domain CLM98_06005 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLM98_06005 IPR010138 UDP-2,3-diacylglucosamine hydrolase CLM98_06005 IPR029052 Metallo-dependent phosphatase-like CLM98_06010 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_06010 IPR036938 CLM98_06010 CLM98_06015 IPR001296 Glycosyl transferase, family 1 CLM98_06015 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_06020 IPR003695 Ppx/GppA phosphatase CLM98_06020 IPR022371 Exopolyphosphatase CLM98_06020 IPR030673 CLM98_06020 CLM98_06025 IPR003414 Polyphosphate kinase CLM98_06025 IPR024953 Polyphosphate kinase middle domain CLM98_06025 IPR025198 Polyphosphate kinase N-terminal domain CLM98_06025 IPR025200 Polyphosphate kinase C-terminal domain CLM98_06025 IPR036830 CLM98_06025 CLM98_06025 IPR036832 CLM98_06025 CLM98_06030 IPR000014 PAS domain CLM98_06030 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_06030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_06030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_06030 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CLM98_06030 IPR021766 Protein of unknown function DUF3329 CLM98_06030 IPR035965 CLM98_06030 CLM98_06030 IPR036097 CLM98_06030 CLM98_06030 IPR036890 CLM98_06030 CLM98_06035 IPR001789 Signal transduction response regulator, receiver domain CLM98_06035 IPR001867 Signal transduction response regulator, C-terminal CLM98_06035 IPR011006 CheY-like superfamily CLM98_06035 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CLM98_06035 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_06035 IPR036388 CLM98_06035 CLM98_06040 IPR001915 Peptidase M48 CLM98_06040 IPR011990 Tetratricopeptide-like helical domain CLM98_06040 IPR030873 CLM98_06040 CLM98_06045 IPR002109 Glutaredoxin CLM98_06045 IPR011767 Glutaredoxin active site CLM98_06045 IPR011900 Glutaredoxin, GrxC CLM98_06045 IPR014025 Glutaredoxin subgroup CLM98_06045 IPR036249 CLM98_06045 CLM98_06050 IPR003779 Carboxymuconolactone decarboxylase-like CLM98_06050 IPR004675 Alkylhydroperoxidase AhpD core CLM98_06050 IPR029032 AhpD-like CLM98_06055 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLM98_06055 IPR024084 Isopropylmalate dehydrogenase-like domain CLM98_06060 IPR010539 Bax inhibitor-1 CLM98_06090 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_06090 IPR013762 Integrase-like, catalytic core CLM98_06095 IPR036388 CLM98_06095 CLM98_06095 IPR036390 CLM98_06095 CLM98_06120 IPR009899 Antirestriction CLM98_06145 IPR002196 Glycoside hydrolase, family 24 CLM98_06145 IPR023346 Lysozyme-like domain CLM98_06150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06160 IPR007633 Bacteriophage P2, GpY, holin CLM98_06205 IPR005215 Trigger factor CLM98_06205 IPR008880 Trigger factor, C-terminal domain CLM98_06205 IPR008881 Trigger factor, ribosome-binding, bacterial CLM98_06205 IPR027304 Trigger factor/SurA domain CLM98_06205 IPR036611 CLM98_06205 CLM98_06205 IPR037041 CLM98_06205 CLM98_06210 IPR001907 ATP-dependent Clp protease proteolytic subunit CLM98_06210 IPR018215 ClpP, active site CLM98_06210 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLM98_06210 IPR029045 ClpP/crotonase-like domain CLM98_06210 IPR033135 CLM98_06210 CLM98_06215 IPR003593 AAA+ ATPase domain CLM98_06215 IPR003959 ATPase, AAA-type, core CLM98_06215 IPR004487 Clp protease, ATP-binding subunit ClpX CLM98_06215 IPR010603 Zinc finger, ClpX C4-type CLM98_06215 IPR019489 Clp ATPase, C-terminal CLM98_06215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06215 IPR038366 CLM98_06215 CLM98_06220 IPR003111 Peptidase S16, lon N-terminal CLM98_06220 IPR003593 AAA+ ATPase domain CLM98_06220 IPR003959 ATPase, AAA-type, core CLM98_06220 IPR004815 Lon protease, bacterial/eukaryotic-type CLM98_06220 IPR008268 Peptidase S16, active site CLM98_06220 IPR008269 Peptidase S16, Lon C-terminal CLM98_06220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_06220 IPR015947 PUA-like domain CLM98_06220 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06220 IPR027543 Lon protease, bacterial CLM98_06225 IPR000119 Histone-like bacterial DNA-binding protein CLM98_06225 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLM98_06225 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_06245 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLM98_06245 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLM98_06245 IPR027304 Trigger factor/SurA domain CLM98_06250 IPR008258 Lytic transglycosylase-like SLT domain CLM98_06250 IPR018392 LysM domain CLM98_06250 IPR023346 Lysozyme-like domain CLM98_06250 IPR036779 CLM98_06250 CLM98_06255 IPR001279 Beta-lactamase-like CLM98_06255 IPR017782 Hydroxyacylglutathione hydrolase CLM98_06255 IPR032282 CLM98_06255 CLM98_06255 IPR036866 CLM98_06255 CLM98_06260 IPR016885 Uncharacterised conserved protein UCP028445 CLM98_06260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_06265 IPR002156 Ribonuclease H domain CLM98_06265 IPR012337 Ribonuclease H-like domain CLM98_06265 IPR022892 Ribonuclease H CLM98_06265 IPR036397 CLM98_06265 CLM98_06270 IPR006054 DNA polymerase III, epsilon subunit CLM98_06270 IPR006309 DNA polymerase 3, epsilon subunit CLM98_06270 IPR012337 Ribonuclease H-like domain CLM98_06270 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_06270 IPR036397 CLM98_06270 CLM98_06275 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLM98_06275 IPR036457 CLM98_06275 CLM98_06290 IPR002201 Glycosyl transferase, family 9 CLM98_06295 IPR011009 Protein kinase-like domain CLM98_06295 IPR022826 3-deoxy-D-manno-octulosonic acid kinase CLM98_06300 IPR001279 Beta-lactamase-like CLM98_06300 IPR036866 CLM98_06300 CLM98_06305 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLM98_06305 IPR006638 Elongator protein 3/MiaB/NifB CLM98_06305 IPR007197 Radical SAM CLM98_06305 IPR010505 Molybdenum cofactor synthesis C-terminal CLM98_06305 IPR013483 Molybdenum cofactor biosynthesis protein A CLM98_06305 IPR013785 Aldolase-type TIM barrel CLM98_06315 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CLM98_06315 IPR023045 Molybdenum cofactor biosynthesis C CLM98_06315 IPR036522 CLM98_06315 CLM98_06320 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CLM98_06320 IPR012675 Beta-grasp domain CLM98_06320 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLM98_06325 IPR003448 Molybdopterin biosynthesis MoaE CLM98_06325 IPR036563 CLM98_06325 CLM98_06335 IPR036890 CLM98_06335 CLM98_06345 IPR005053 MobA/MobL protein CLM98_06360 IPR002104 Integrase, catalytic CLM98_06360 IPR010998 Integrase, Lambda-type, N-terminal CLM98_06360 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_06360 IPR013762 Integrase-like, catalytic core CLM98_06370 IPR001270 ClpA/B family CLM98_06370 IPR003593 AAA+ ATPase domain CLM98_06370 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLM98_06370 IPR012763 DNA polymerase III, subunit gamma/ tau CLM98_06370 IPR021029 DNA polymerase III, tau subunit, domain V CLM98_06370 IPR022754 DNA polymerase III, gamma subunit, domain III CLM98_06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06370 IPR038249 CLM98_06370 CLM98_06375 IPR004401 Nucleoid-associated protein YbaB CLM98_06375 IPR036894 CLM98_06375 CLM98_06380 IPR000093 DNA recombination protein RecR CLM98_06380 IPR006171 Toprim domain CLM98_06380 IPR015967 Recombination protein RecR, conserved site CLM98_06380 IPR023627 Recombination protein RecR CLM98_06380 IPR023628 Recombination protein RecR, C4-type zinc finger CLM98_06385 IPR001310 Histidine triad (HIT) protein CLM98_06385 IPR019808 Histidine triad, conserved site CLM98_06385 IPR036265 CLM98_06385 CLM98_06390 IPR004658 Outer membrane lipoprotein Slp CLM98_06395 IPR002931 Transglutaminase-like CLM98_06395 IPR021878 Protein of unknown function DUF3488 CLM98_06395 IPR038765 CLM98_06395 CLM98_06400 IPR002881 Domain of unknown function DUF58 CLM98_06405 IPR003593 AAA+ ATPase domain CLM98_06405 IPR011703 ATPase, AAA-3 CLM98_06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06410 IPR038731 CLM98_06410 CLM98_06425 IPR003697 Maf-like protein CLM98_06425 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_06430 IPR003772 Protein of unknown function DUF177 CLM98_06435 IPR002677 Ribosomal protein L32p CLM98_06435 IPR011332 Zinc-binding ribosomal protein CLM98_06440 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLM98_06440 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLM98_06440 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_06440 IPR016039 Thiolase-like CLM98_06445 IPR000014 PAS domain CLM98_06445 IPR013978 MEKHLA CLM98_06445 IPR035965 CLM98_06445 CLM98_06450 IPR001227 Acyl transferase domain CLM98_06450 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CLM98_06450 IPR014043 Acyl transferase CLM98_06450 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLM98_06450 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLM98_06450 IPR020801 Polyketide synthase, acyl transferase domain CLM98_06450 IPR024925 Malonyl CoA-acyl carrier protein transacylase CLM98_06455 IPR002347 Glucose/ribitol dehydrogenase CLM98_06455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLM98_06455 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_06455 IPR036291 CLM98_06455 CLM98_06460 IPR003231 Acyl carrier protein (ACP) CLM98_06460 IPR006162 Phosphopantetheine attachment site CLM98_06460 IPR009081 Acyl carrier protein-like CLM98_06460 IPR036736 CLM98_06460 CLM98_06465 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_06465 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_06465 IPR016039 Thiolase-like CLM98_06465 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CLM98_06465 IPR018201 Beta-ketoacyl synthase, active site CLM98_06465 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_06470 IPR005801 ADC synthase CLM98_06470 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I CLM98_06470 IPR015890 Chorismate binding, C-terminal CLM98_06470 IPR019999 Anthranilate synthase component I - like CLM98_06475 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLM98_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06485 IPR009875 PilZ domain CLM98_06500 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_06500 IPR002197 DNA binding HTH domain, Fis-type CLM98_06500 IPR003593 AAA+ ATPase domain CLM98_06500 IPR009057 Homeodomain-like CLM98_06500 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal CLM98_06500 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR CLM98_06500 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_06500 IPR025944 Sigma-54 interaction domain, conserved site CLM98_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06505 IPR012695 Methylisocitrate lyase CLM98_06505 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_06505 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLM98_06510 IPR002020 Citrate synthase-like CLM98_06510 IPR011278 2-methylcitrate synthase/citrate synthase type I CLM98_06510 IPR016142 Citrate synthase-like, large alpha subdomain CLM98_06510 IPR016143 Citrate synthase-like, small alpha subdomain CLM98_06510 IPR019810 Citrate synthase active site CLM98_06510 IPR024176 Citrate synthase, bacterial-type CLM98_06510 IPR036969 CLM98_06510 CLM98_06515 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CLM98_06515 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CLM98_06515 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent CLM98_06515 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_06515 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_06515 IPR036008 CLM98_06515 CLM98_06520 IPR010985 Ribbon-helix-helix CLM98_06520 IPR013321 Arc-type ribbon-helix-helix CLM98_06520 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CLM98_06525 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLM98_06525 IPR035093 CLM98_06525 CLM98_06535 IPR007400 PrpF protein CLM98_06535 IPR012709 PrpF, AcnD-accessory CLM98_06540 IPR000531 TonB-dependent receptor, beta-barrel CLM98_06540 IPR012910 TonB-dependent receptor, plug CLM98_06540 IPR036942 CLM98_06540 CLM98_06545 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_06545 IPR036452 CLM98_06545 CLM98_06555 IPR001599 Alpha-2-macroglobulin CLM98_06555 IPR002890 Alpha-2-macroglobulin, N-terminal CLM98_06555 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLM98_06555 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CLM98_06555 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CLM98_06560 IPR000531 TonB-dependent receptor, beta-barrel CLM98_06560 IPR010104 Bacterial TonB-dependent receptor CLM98_06560 IPR012910 TonB-dependent receptor, plug CLM98_06560 IPR037066 CLM98_06560 CLM98_06565 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLM98_06565 IPR030395 CLM98_06565 CLM98_06565 IPR032160 CLM98_06565 CLM98_06575 IPR001264 Glycosyl transferase, family 51 CLM98_06575 IPR001460 Penicillin-binding protein, transpeptidase CLM98_06575 IPR009647 Penicillin-binding, C-terminal CLM98_06575 IPR011815 Penicillin-binding protein 1C CLM98_06575 IPR012338 Beta-lactamase/transpeptidase-like CLM98_06575 IPR023346 Lysozyme-like domain CLM98_06575 IPR036950 CLM98_06575 CLM98_06580 IPR008331 Ferritin/DPS protein domain CLM98_06580 IPR009078 Ferritin-like superfamily CLM98_06580 IPR012347 Ferritin-related CLM98_06580 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold CLM98_06585 IPR013740 Redoxin CLM98_06585 IPR036249 CLM98_06585 CLM98_06590 IPR002068 Alpha crystallin/Hsp20 domain CLM98_06590 IPR008978 HSP20-like chaperone CLM98_06595 IPR001623 DnaJ domain CLM98_06595 IPR002939 Chaperone DnaJ, C-terminal CLM98_06595 IPR008971 HSP40/DnaJ peptide-binding CLM98_06595 IPR018253 DnaJ domain, conserved site CLM98_06595 IPR036869 CLM98_06595 CLM98_06600 IPR001789 Signal transduction response regulator, receiver domain CLM98_06600 IPR011006 CheY-like superfamily CLM98_06605 IPR001107 Band 7 protein CLM98_06605 IPR001972 Stomatin family CLM98_06605 IPR010201 HflK CLM98_06605 IPR036013 CLM98_06605 CLM98_06610 IPR001107 Band 7 protein CLM98_06610 IPR010200 HflC CLM98_06610 IPR036013 CLM98_06610 CLM98_06615 IPR002686 Transposase IS200-like CLM98_06615 IPR036515 CLM98_06615 CLM98_06620 IPR001114 Adenylosuccinate synthetase CLM98_06620 IPR018220 Adenylosuccinate synthase, active site CLM98_06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06620 IPR033128 CLM98_06620 CLM98_06625 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLM98_06625 IPR024571 ERAP1-like C-terminal domain CLM98_06630 IPR002347 Glucose/ribitol dehydrogenase CLM98_06630 IPR036291 CLM98_06630 CLM98_06635 IPR001647 DNA-binding HTH domain, TetR-type CLM98_06635 IPR009057 Homeodomain-like CLM98_06635 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_06635 IPR036271 CLM98_06635 CLM98_06675 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLM98_06690 IPR000719 Protein kinase domain CLM98_06690 IPR011009 Protein kinase-like domain CLM98_06690 IPR017441 Protein kinase, ATP binding site CLM98_06705 IPR001647 DNA-binding HTH domain, TetR-type CLM98_06705 IPR009057 Homeodomain-like CLM98_06710 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLM98_06710 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_06710 IPR029033 Histidine phosphatase superfamily CLM98_06715 IPR000631 YjeF C-terminal domain CLM98_06715 IPR029056 Ribokinase-like CLM98_06720 IPR001139 Glycoside hydrolase, family 30 CLM98_06720 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_06720 IPR017853 Glycoside hydrolase, superfamily CLM98_06720 IPR033452 CLM98_06720 CLM98_06720 IPR033453 CLM98_06720 CLM98_06725 IPR008928 Six-hairpin glycosidase-like CLM98_06725 IPR011613 Glycoside hydrolase family 15 CLM98_06725 IPR012341 Six-hairpin glycosidase CLM98_06730 IPR002347 Glucose/ribitol dehydrogenase CLM98_06730 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_06730 IPR036291 CLM98_06730 CLM98_06740 IPR005887 Alpha-1,2-mannosidase, putative CLM98_06740 IPR008928 Six-hairpin glycosidase-like CLM98_06740 IPR012939 Glycosyl hydrolase family 92 CLM98_06740 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_06755 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CLM98_06755 IPR037151 CLM98_06755 CLM98_06760 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLM98_06760 IPR000595 Cyclic nucleotide-binding domain CLM98_06760 IPR014710 RmlC-like jelly roll fold CLM98_06760 IPR018490 Cyclic nucleotide-binding-like CLM98_06760 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_06760 IPR036188 CLM98_06760 CLM98_06765 IPR001607 Zinc finger, UBP-type CLM98_06765 IPR013083 Zinc finger, RING/FYVE/PHD-type CLM98_06770 IPR001633 EAL domain CLM98_06770 IPR035919 CLM98_06770 CLM98_06775 IPR003607 HD/PDEase domain CLM98_06780 IPR003439 ABC transporter-like CLM98_06780 IPR017871 ABC transporter, conserved site CLM98_06780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06785 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLM98_06785 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLM98_06785 IPR036856 CLM98_06785 CLM98_06785 IPR037165 CLM98_06785 CLM98_06790 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLM98_06790 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLM98_06790 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_06790 IPR036318 CLM98_06790 CLM98_06790 IPR036683 CLM98_06790 CLM98_06795 IPR001041 2Fe-2S ferredoxin-type domain CLM98_06795 IPR002888 [2Fe-2S]-binding CLM98_06795 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_06795 IPR012675 Beta-grasp domain CLM98_06795 IPR036010 CLM98_06795 CLM98_06795 IPR036884 CLM98_06795 CLM98_06800 IPR008482 Protein of unknown function DUF763 CLM98_06805 IPR018306 Bacteriophage T5, Orf172 DNA-binding CLM98_06810 IPR011051 RmlC-like cupin domain CLM98_06810 IPR013096 Cupin 2, conserved barrel CLM98_06810 IPR014710 RmlC-like jelly roll fold CLM98_06820 IPR003812 Fido domain CLM98_06820 IPR006440 Death on curing protein CLM98_06820 IPR036597 CLM98_06820 CLM98_06825 IPR007159 AbrB-like domain CLM98_06825 IPR013432 Putative addiction module antidote CLM98_06825 IPR037914 CLM98_06825 CLM98_06830 IPR006197 Peptidase S24, LexA-like CLM98_06830 IPR006199 LexA repressor, DNA-binding domain CLM98_06830 IPR006200 LexA repressor CLM98_06830 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_06830 IPR036286 CLM98_06830 CLM98_06830 IPR036388 CLM98_06830 CLM98_06830 IPR036390 CLM98_06830 CLM98_06835 IPR017166 Uncharacterised conserved protein UCP037290 CLM98_06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06840 IPR001126 DNA-repair protein, UmuC-like CLM98_06845 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLM98_06845 IPR004013 PHP, C-terminal CLM98_06845 IPR004805 DNA polymerase III, alpha subunit CLM98_06845 IPR011708 Bacterial DNA polymerase III, alpha subunit CLM98_06845 IPR016195 Polymerase/histidinol phosphatase-like CLM98_06845 IPR023073 DNA polymerase, error-prone CLM98_06845 IPR029460 DNA polymerase, helix-hairpin-helix motif CLM98_06855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_06855 IPR029058 Alpha/Beta hydrolase fold CLM98_06860 IPR003607 HD/PDEase domain CLM98_06860 IPR013976 Metal-dependent hydrolase HDOD CLM98_06865 IPR004813 Oligopeptide transporter, OPT superfamily CLM98_06865 IPR004814 Oligopeptide transporter HI_0561 CLM98_06870 IPR025737 MetA-pathway of phenol degradation, putative CLM98_06880 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_06880 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_06880 IPR011659 WD40-like Beta Propeller CLM98_06880 IPR029058 Alpha/Beta hydrolase fold CLM98_06895 IPR000014 PAS domain CLM98_06895 IPR009057 Homeodomain-like CLM98_06895 IPR013656 PAS fold-4 CLM98_06895 IPR018060 DNA binding HTH domain, AraC-type CLM98_06895 IPR018062 HTH domain AraC-type, conserved site CLM98_06895 IPR020449 Transcription regulator HTH, AraC- type CLM98_06895 IPR035965 CLM98_06895 CLM98_06915 IPR002226 Catalase haem-binding site CLM98_06915 IPR010582 Catalase immune-responsive domain CLM98_06915 IPR011614 Catalase core domain CLM98_06915 IPR018028 Catalase, mono-functional, haem-containing CLM98_06915 IPR020835 Catalase-like domain CLM98_06915 IPR024708 Catalase active site CLM98_06915 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CLM98_06915 IPR029062 Class I glutamine amidotransferase-like CLM98_06915 IPR037060 CLM98_06915 CLM98_06920 IPR020471 Aldo/keto reductase subgroup CLM98_06920 IPR023210 NADP-dependent oxidoreductase domain CLM98_06920 IPR036812 CLM98_06920 CLM98_06925 IPR002018 Carboxylesterase, type B CLM98_06925 IPR019819 Carboxylesterase type B, conserved site CLM98_06925 IPR019826 Carboxylesterase type B, active site CLM98_06925 IPR029058 Alpha/Beta hydrolase fold CLM98_06930 IPR003437 Glycine cleavage system P protein, homodimeric CLM98_06930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_06930 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_06930 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_06930 IPR020581 Glycine cleavage system P protein CLM98_06935 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLM98_06935 IPR011701 Major facilitator superfamily CLM98_06935 IPR036259 CLM98_06935 CLM98_06945 IPR001548 Peptidase M2, peptidyl-dipeptidase A CLM98_06955 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_06955 IPR036938 CLM98_06955 CLM98_06960 IPR038731 CLM98_06960 CLM98_06965 IPR001789 Signal transduction response regulator, receiver domain CLM98_06965 IPR001867 Signal transduction response regulator, C-terminal CLM98_06965 IPR011006 CheY-like superfamily CLM98_06965 IPR036388 CLM98_06965 CLM98_06970 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_06970 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_06970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_06970 IPR036097 CLM98_06970 CLM98_06970 IPR036890 CLM98_06970 CLM98_06980 IPR005527 Septum formation topological specificity factor MinE CLM98_06980 IPR036707 CLM98_06980 CLM98_06985 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_06985 IPR010223 ATP binding protein MinD, bacterial-type CLM98_06985 IPR025501 ATP binding protein MinD CLM98_06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_06990 IPR005526 Septum formation inhibitor MinC, C-terminal CLM98_06990 IPR007874 Septum formation inhibitor MinC, N-terminal CLM98_06990 IPR013033 Septum formation inhibitor MinC CLM98_06990 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CLM98_06990 IPR036145 CLM98_06990 CLM98_06990 IPR038061 CLM98_06990 CLM98_06995 IPR000182 GNAT domain CLM98_06995 IPR016181 Acyl-CoA N-acyltransferase CLM98_06995 IPR016890 Uncharacterised conserved protein UCP028520 CLM98_07005 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_07005 IPR036890 CLM98_07005 CLM98_07010 IPR000792 Transcription regulator LuxR, C-terminal CLM98_07010 IPR001789 Signal transduction response regulator, receiver domain CLM98_07010 IPR011006 CheY-like superfamily CLM98_07010 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_07015 IPR011256 Regulatory factor, effector binding domain CLM98_07015 IPR019587 Polyketide cyclase/dehydrase CLM98_07020 IPR006696 Protein of unknown function DUF423 CLM98_07025 IPR003265 HhH-GPD domain CLM98_07025 IPR011257 DNA glycosylase CLM98_07030 IPR003709 Peptidase M15B/M15C CLM98_07030 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLM98_07035 IPR010985 Ribbon-helix-helix CLM98_07035 IPR013321 Arc-type ribbon-helix-helix CLM98_07050 IPR001107 Band 7 protein CLM98_07050 IPR036013 CLM98_07050 CLM98_07055 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLM98_07055 IPR005862 Phosphoribosylglycinamide formyltransferase 2 CLM98_07055 IPR011054 Rudiment single hybrid motif CLM98_07055 IPR013815 ATP-grasp fold, subdomain 1 CLM98_07055 IPR016185 Pre-ATP-grasp domain CLM98_07060 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_07060 IPR036691 CLM98_07060 CLM98_07065 IPR007471 Arginine-tRNA-protein transferase, N-terminal CLM98_07065 IPR007472 Arginine-tRNA-protein transferase, C-terminal CLM98_07065 IPR016181 Acyl-CoA N-acyltransferase CLM98_07065 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic CLM98_07070 IPR002048 EF-hand domain CLM98_07070 IPR011992 EF-hand domain pair CLM98_07070 IPR018247 EF-Hand 1, calcium-binding site CLM98_07080 IPR018551 Domain of unknown function DUF2007 CLM98_07085 IPR003703 Acyl-CoA thioesterase CLM98_07085 IPR029069 HotDog domain CLM98_07090 IPR001753 Crotonase superfamily CLM98_07090 IPR029045 ClpP/crotonase-like domain CLM98_07095 IPR007410 DR1885-like metal-binding protein CLM98_07095 IPR036182 CLM98_07095 CLM98_07100 IPR029069 HotDog domain CLM98_07105 IPR003439 ABC transporter-like CLM98_07105 IPR004602 UvrABC system subunit A CLM98_07105 IPR017871 ABC transporter, conserved site CLM98_07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07110 IPR001787 Ribosomal protein L21 CLM98_07110 IPR018258 Ribosomal protein L21, conserved site CLM98_07110 IPR028909 Ribosomal protein L21-like CLM98_07110 IPR036164 CLM98_07110 CLM98_07115 IPR001684 Ribosomal protein L27 CLM98_07115 IPR018261 Ribosomal protein L27, conserved site CLM98_07120 IPR006073 GTP binding domain CLM98_07120 IPR006074 GTP1/OBG, conserved site CLM98_07120 IPR006169 GTP1/OBG domain CLM98_07120 IPR014100 GTP-binding protein Obg/CgtA CLM98_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07120 IPR035101 CLM98_07120 CLM98_07120 IPR036726 CLM98_07120 CLM98_07125 IPR002583 Ribosomal protein S20 CLM98_07125 IPR036510 CLM98_07125 CLM98_07130 IPR004268 Flagellin assembly, membrane protein MviN CLM98_07135 IPR002606 Riboflavin kinase, bacterial CLM98_07135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07135 IPR015864 FAD synthetase CLM98_07135 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CLM98_07135 IPR023465 Riboflavin kinase domain CLM98_07140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_07140 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_07140 IPR002301 Isoleucine-tRNA ligase CLM98_07140 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_07140 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_07140 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CLM98_07140 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_07140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07140 IPR023585 Isoleucine-tRNA ligase, type 1 CLM98_07145 IPR001872 Peptidase A8, signal peptidase II CLM98_07150 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CLM98_07165 IPR000883 Cytochrome c oxidase subunit I CLM98_07165 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CLM98_07165 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLM98_07165 IPR036927 CLM98_07165 CLM98_07170 IPR000298 Cytochrome c oxidase subunit III domain CLM98_07170 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CLM98_07170 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CLM98_07170 IPR035973 CLM98_07170 CLM98_07175 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CLM98_07175 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CLM98_07180 IPR001478 PDZ domain CLM98_07180 IPR007963 Peptidase M61, catalytic domain CLM98_07180 IPR011716 Tetratricopeptide TPR-3 CLM98_07180 IPR024191 Peptidase M61 CLM98_07180 IPR036034 CLM98_07180 CLM98_07185 IPR003593 AAA+ ATPase domain CLM98_07185 IPR004504 DNA repair protein RadA CLM98_07185 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_07185 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07190 IPR008523 Lactobacillus phage LBR48, DUF805 CLM98_07195 IPR001867 Signal transduction response regulator, C-terminal CLM98_07195 IPR011006 CheY-like superfamily CLM98_07195 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_07195 IPR036388 CLM98_07195 CLM98_07200 IPR009057 Homeodomain-like CLM98_07200 IPR011990 Tetratricopeptide-like helical domain CLM98_07200 IPR018060 DNA binding HTH domain, AraC-type CLM98_07200 IPR018062 HTH domain AraC-type, conserved site CLM98_07205 IPR001404 Heat shock protein Hsp90 family CLM98_07205 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_07205 IPR020575 Heat shock protein Hsp90, N-terminal CLM98_07205 IPR036890 CLM98_07205 CLM98_07210 IPR011990 Tetratricopeptide-like helical domain CLM98_07220 IPR002645 STAS domain CLM98_07220 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain CLM98_07220 IPR036513 CLM98_07220 CLM98_07225 IPR036513 CLM98_07225 CLM98_07230 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07230 IPR036890 CLM98_07230 CLM98_07235 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLM98_07235 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07235 IPR036457 CLM98_07235 CLM98_07235 IPR036890 CLM98_07235 CLM98_07240 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07240 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_07240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07240 IPR036097 CLM98_07240 CLM98_07240 IPR036890 CLM98_07240 CLM98_07245 IPR000014 PAS domain CLM98_07245 IPR001789 Signal transduction response regulator, receiver domain CLM98_07245 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07245 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_07245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07245 IPR011006 CheY-like superfamily CLM98_07245 IPR013656 PAS fold-4 CLM98_07245 IPR035965 CLM98_07245 CLM98_07245 IPR036097 CLM98_07245 CLM98_07245 IPR036890 CLM98_07245 CLM98_07250 IPR006710 Glycoside hydrolase, family 43 CLM98_07250 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_07250 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_07255 IPR000531 TonB-dependent receptor, beta-barrel CLM98_07255 IPR010916 TonB box, conserved site CLM98_07255 IPR012910 TonB-dependent receptor, plug CLM98_07255 IPR036942 CLM98_07255 CLM98_07260 IPR005746 Thioredoxin CLM98_07260 IPR013766 Thioredoxin domain CLM98_07260 IPR017937 Thioredoxin, conserved site CLM98_07260 IPR036249 CLM98_07260 CLM98_07265 IPR009874 Protein of unknown function DUF1428 CLM98_07265 IPR011008 Dimeric alpha-beta barrel CLM98_07270 IPR001789 Signal transduction response regulator, receiver domain CLM98_07270 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07270 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_07270 IPR011006 CheY-like superfamily CLM98_07270 IPR036097 CLM98_07270 CLM98_07270 IPR036890 CLM98_07270 CLM98_07275 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_07275 IPR035909 CLM98_07275 CLM98_07280 IPR000780 MCP methyltransferase, CheR-type CLM98_07280 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CLM98_07280 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_07280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_07285 IPR001789 Signal transduction response regulator, receiver domain CLM98_07285 IPR003018 GAF domain CLM98_07285 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07285 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_07285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07285 IPR011006 CheY-like superfamily CLM98_07285 IPR029016 GAF domain-like CLM98_07285 IPR036097 CLM98_07285 CLM98_07285 IPR036890 CLM98_07285 CLM98_07290 IPR000014 PAS domain CLM98_07290 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_07290 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_07290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_07290 IPR035965 CLM98_07290 CLM98_07290 IPR036097 CLM98_07290 CLM98_07290 IPR036890 CLM98_07290 CLM98_07295 IPR001789 Signal transduction response regulator, receiver domain CLM98_07295 IPR011006 CheY-like superfamily CLM98_07300 IPR000757 Glycoside hydrolase, family 16 CLM98_07300 IPR008979 Galactose-binding domain-like CLM98_07300 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_07305 IPR010720 Alpha-L-arabinofuranosidase, C-terminal CLM98_07305 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_07305 IPR017853 Glycoside hydrolase, superfamily CLM98_07310 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CLM98_07310 IPR011013 Galactose mutarotase-like domain CLM98_07310 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_07310 IPR015443 Aldose 1-epimerase CLM98_07315 IPR002541 Cytochrome c assembly protein CLM98_07320 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_07320 IPR003593 AAA+ ATPase domain CLM98_07320 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CLM98_07320 IPR004780 Signal recognition particle protein Ffh CLM98_07320 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CLM98_07320 IPR022941 Signal recognition particle, SRP54 subunit CLM98_07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07320 IPR036891 CLM98_07320 CLM98_07325 IPR004136 2-nitropropane dioxygenase, NPD CLM98_07325 IPR013785 Aldolase-type TIM barrel CLM98_07330 IPR001544 Aminotransferase, class IV CLM98_07330 IPR036038 CLM98_07330 CLM98_07335 IPR000307 Ribosomal protein S16 CLM98_07335 IPR020592 Ribosomal protein S16, conserved site CLM98_07335 IPR023803 Ribosomal protein S16 domain CLM98_07340 IPR002676 RimM protein CLM98_07340 IPR009000 Translation protein, beta-barrel domain CLM98_07340 IPR011033 PRC-barrel-like CLM98_07340 IPR011961 16S rRNA processing protein RimM CLM98_07340 IPR027275 PRC-barrel domain CLM98_07340 IPR036976 CLM98_07340 CLM98_07345 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CLM98_07345 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CLM98_07345 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CLM98_07345 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_07345 IPR029028 Alpha/beta knot methyltransferases CLM98_07350 IPR001857 Ribosomal protein L19 CLM98_07350 IPR008991 Translation protein SH3-like domain CLM98_07350 IPR018257 Ribosomal protein L19, conserved site CLM98_07350 IPR038657 CLM98_07350 CLM98_07360 IPR013196 Helix-turn-helix, type 11 CLM98_07360 IPR026881 WYL domain CLM98_07360 IPR036388 CLM98_07360 CLM98_07360 IPR036390 CLM98_07360 CLM98_07365 IPR004045 Glutathione S-transferase, N-terminal CLM98_07365 IPR004046 Glutathione S-transferase, C-terminal CLM98_07365 IPR036249 CLM98_07365 CLM98_07365 IPR036282 CLM98_07365 CLM98_07370 IPR002942 RNA-binding S4 domain CLM98_07370 IPR036986 CLM98_07370 CLM98_07375 IPR000763 Catalase-peroxidase haem CLM98_07375 IPR002016 Haem peroxidase, plant/fungal/bacterial CLM98_07375 IPR010255 Haem peroxidase CLM98_07375 IPR019793 Peroxidases heam-ligand binding site CLM98_07375 IPR019794 Peroxidase, active site CLM98_07380 IPR009282 Protein of unknown function DUF937 CLM98_07380 IPR018247 EF-Hand 1, calcium-binding site CLM98_07385 IPR000432 DNA mismatch repair protein MutS, C-terminal CLM98_07385 IPR005748 DNA mismatch repair protein MutS, type 1 CLM98_07385 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CLM98_07385 IPR007696 DNA mismatch repair protein MutS, core CLM98_07385 IPR007860 DNA mismatch repair protein MutS, connector domain CLM98_07385 IPR007861 DNA mismatch repair protein MutS, clamp CLM98_07385 IPR016151 DNA mismatch repair protein MutS, N-terminal CLM98_07385 IPR017261 DNA mismatch repair protein Msh6 CLM98_07385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07385 IPR036187 CLM98_07385 CLM98_07385 IPR036678 CLM98_07385 CLM98_07390 IPR031325 CLM98_07390 CLM98_07395 IPR013783 Immunoglobulin-like fold CLM98_07395 IPR022385 Rhs repeat-associated core CLM98_07400 IPR025361 Protein of unknown function DUF4265 CLM98_07410 IPR000421 Coagulation factor 5/8 C-terminal type domain CLM98_07410 IPR000933 Glycoside hydrolase, family 29 CLM98_07410 IPR008979 Galactose-binding domain-like CLM98_07410 IPR017853 Glycoside hydrolase, superfamily CLM98_07420 IPR006101 Glycoside hydrolase, family 2 CLM98_07420 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_07420 IPR006103 Glycoside hydrolase, family 2, TIM barrel CLM98_07420 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_07420 IPR008979 Galactose-binding domain-like CLM98_07420 IPR013783 Immunoglobulin-like fold CLM98_07420 IPR017853 Glycoside hydrolase, superfamily CLM98_07420 IPR032311 CLM98_07420 CLM98_07420 IPR036156 CLM98_07420 CLM98_07425 IPR011683 Glycosyl hydrolase family 53 CLM98_07425 IPR017853 Glycoside hydrolase, superfamily CLM98_07430 IPR000531 TonB-dependent receptor, beta-barrel CLM98_07430 IPR010104 Bacterial TonB-dependent receptor CLM98_07430 IPR012910 TonB-dependent receptor, plug CLM98_07430 IPR036942 CLM98_07430 CLM98_07430 IPR037066 CLM98_07430 CLM98_07435 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_07435 IPR010359 Protein of unknown function DUF955 CLM98_07435 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_07435 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CLM98_07435 IPR026281 HTH type transcriptional regulator Rv0465c/Mt0481 CLM98_07440 IPR010061 Methylmalonate-semialdehyde dehydrogenase CLM98_07440 IPR015590 Aldehyde dehydrogenase domain CLM98_07440 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_07440 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_07440 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_07440 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_07445 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_07445 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_07445 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_07445 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_07445 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_07445 IPR036250 CLM98_07445 CLM98_07445 IPR037069 CLM98_07445 CLM98_07450 IPR001753 Crotonase superfamily CLM98_07450 IPR014748 Crontonase, C-terminal CLM98_07450 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_07450 IPR029045 ClpP/crotonase-like domain CLM98_07455 IPR029045 ClpP/crotonase-like domain CLM98_07455 IPR032259 CLM98_07455 CLM98_07460 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLM98_07460 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_07460 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_07460 IPR011548 3-hydroxyisobutyrate dehydrogenase CLM98_07460 IPR013328 Dehydrogenase, multihelical CLM98_07460 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CLM98_07460 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_07460 IPR036291 CLM98_07460 CLM98_07465 IPR002524 Cation efflux protein CLM98_07465 IPR027469 Cation efflux protein transmembrane domain CLM98_07465 IPR036837 CLM98_07465 CLM98_07470 IPR001753 Crotonase superfamily CLM98_07470 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLM98_07470 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLM98_07470 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_07470 IPR029045 ClpP/crotonase-like domain CLM98_07470 IPR036291 CLM98_07470 CLM98_07475 IPR007627 RNA polymerase sigma-70 region 2 CLM98_07475 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_07475 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_07475 IPR013325 RNA polymerase sigma factor, region 2 CLM98_07475 IPR014284 RNA polymerase sigma-70 like domain CLM98_07475 IPR014286 RNA polymerase sigma-70 RpoE type CLM98_07475 IPR036388 CLM98_07475 CLM98_07480 IPR005572 Anti sigma-E protein RseA, N-terminal CLM98_07480 IPR036147 CLM98_07480 CLM98_07485 IPR001478 PDZ domain CLM98_07485 IPR001940 Peptidase S1C CLM98_07485 IPR009003 Trypsin-like cysteine/serine peptidase domain CLM98_07485 IPR011782 Peptidase S1C, Do CLM98_07485 IPR036034 CLM98_07485 CLM98_07490 IPR000640 Translation elongation factor EFG, V domain CLM98_07490 IPR000795 Elongation factor, GTP-binding domain CLM98_07490 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLM98_07490 IPR005225 Small GTP-binding protein domain CLM98_07490 IPR006297 Elongation factor 4 CLM98_07490 IPR013842 GTP-binding protein LepA, C-terminal CLM98_07490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07490 IPR031157 CLM98_07490 CLM98_07490 IPR035647 CLM98_07490 CLM98_07490 IPR038363 CLM98_07490 CLM98_07495 IPR000223 Peptidase S26A, signal peptidase I CLM98_07495 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_07495 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CLM98_07495 IPR019758 Peptidase S26A, signal peptidase I, conserved site CLM98_07495 IPR036286 CLM98_07495 CLM98_07500 IPR032314 CLM98_07500 CLM98_07505 IPR000999 Ribonuclease III domain CLM98_07505 IPR011907 Ribonuclease III CLM98_07505 IPR014720 Double-stranded RNA-binding domain CLM98_07505 IPR036389 CLM98_07505 CLM98_07515 IPR003717 Recombination protein O, RecO CLM98_07515 IPR012340 Nucleic acid-binding, OB-fold CLM98_07515 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLM98_07515 IPR037278 CLM98_07515 CLM98_07520 IPR001789 Signal transduction response regulator, receiver domain CLM98_07520 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_07520 IPR011006 CheY-like superfamily CLM98_07520 IPR036641 CLM98_07520 CLM98_07525 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CLM98_07525 IPR010280 (Uracil-5)-methyltransferase family CLM98_07525 IPR012340 Nucleic acid-binding, OB-fold CLM98_07525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_07525 IPR030390 CLM98_07525 CLM98_07525 IPR030391 CLM98_07525 CLM98_07530 IPR012042 Uncharacterised conserved protein UCP016487, CYTH-type CLM98_07530 IPR023577 CYTH-like domain CLM98_07530 IPR033469 CLM98_07530 CLM98_07535 IPR001853 DSBA-like thioredoxin domain CLM98_07535 IPR036249 CLM98_07535 CLM98_07540 IPR036188 CLM98_07540 CLM98_07545 IPR007357 Deoxyribodipyrimidine photolyase-related protein CLM98_07545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07545 IPR036134 CLM98_07545 CLM98_07550 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_07550 IPR017853 Glycoside hydrolase, superfamily CLM98_07550 IPR019800 Glycoside hydrolase, family 3, active site CLM98_07550 IPR022956 Beta-hexosaminidase, bacterial CLM98_07550 IPR036962 CLM98_07550 CLM98_07555 IPR000836 Phosphoribosyltransferase domain CLM98_07555 IPR029057 Phosphoribosyltransferase-like CLM98_07560 IPR000845 Nucleoside phosphorylase domain CLM98_07560 IPR010044 Methylthioadenosine phosphorylase (MTAP) CLM98_07560 IPR018099 Purine phosphorylase, family 2, conserved site CLM98_07560 IPR035994 CLM98_07560 CLM98_07565 IPR002059 Cold-shock protein, DNA-binding CLM98_07565 IPR011129 Cold shock protein CLM98_07565 IPR012156 Cold shock, CspA CLM98_07565 IPR012340 Nucleic acid-binding, OB-fold CLM98_07565 IPR019844 Cold-shock conserved site CLM98_07570 IPR002938 Monooxygenase, FAD-binding CLM98_07570 IPR036188 CLM98_07570 CLM98_07575 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLM98_07575 IPR024173 Phosphoesterase, MJ0037 CLM98_07575 IPR026336 Metallophosphoesterase, DNA ligase-associated CLM98_07575 IPR029052 Metallo-dependent phosphatase-like CLM98_07580 IPR001650 Helicase, C-terminal CLM98_07580 IPR011545 DEAD/DEAH box helicase domain CLM98_07580 IPR013701 DEAD/H associated CLM98_07580 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_07580 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted CLM98_07580 IPR026362 DEXH box helicase, DNA ligase-associated CLM98_07580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07585 IPR012308 DNA ligase, ATP-dependent, N-terminal CLM98_07585 IPR012309 DNA ligase, ATP-dependent, C-terminal CLM98_07585 IPR012310 DNA ligase, ATP-dependent, central CLM98_07585 IPR012340 Nucleic acid-binding, OB-fold CLM98_07585 IPR026333 ATP-dependent DNA ligase, PP_1105 family CLM98_07595 IPR026360 Putative exonuclease, DNA ligase-associated CLM98_07595 IPR036866 CLM98_07595 CLM98_07605 IPR007607 Protein of unknown function DUF583 CLM98_07610 IPR000160 GGDEF domain CLM98_07610 IPR003018 GAF domain CLM98_07610 IPR007891 CHASE3 CLM98_07610 IPR029016 GAF domain-like CLM98_07610 IPR029787 Nucleotide cyclase CLM98_07630 IPR002155 Thiolase CLM98_07630 IPR016039 Thiolase-like CLM98_07630 IPR020610 Thiolase, active site CLM98_07630 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_07630 IPR020616 Thiolase, N-terminal CLM98_07630 IPR020617 Thiolase, C-terminal CLM98_07635 IPR000209 Peptidase S8/S53 domain CLM98_07635 IPR005546 Autotransporter beta-domain CLM98_07635 IPR013425 Autotransporter-associated beta strand repeat CLM98_07635 IPR015500 Peptidase S8, subtilisin-related CLM98_07635 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_07635 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_07635 IPR036709 CLM98_07635 CLM98_07635 IPR036852 CLM98_07635 CLM98_07640 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CLM98_07640 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CLM98_07640 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CLM98_07640 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal CLM98_07640 IPR033524 CLM98_07640 CLM98_07640 IPR036291 CLM98_07640 CLM98_07645 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_07645 IPR006597 Sel1-like CLM98_07645 IPR006620 Prolyl 4-hydroxylase, alpha subunit CLM98_07645 IPR011990 Tetratricopeptide-like helical domain CLM98_07655 IPR002725 Protein of unknown function DUF45 CLM98_07660 IPR009760 Protein of unknown function DUF1328 CLM98_07665 IPR021250 Protein of unknown function DUF2789 CLM98_07670 IPR000962 Zinc finger, DksA/TraR C4-type CLM98_07670 IPR012783 Zinc finger, C4 DksA/TraR-type CLM98_07670 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CLM98_07670 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CLM98_07675 IPR006685 Mechanosensitive ion channel MscS CLM98_07675 IPR010920 Like-Sm (LSM) domain CLM98_07685 IPR004753 Cell shape determining protein MreB/Mrl CLM98_07690 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLM98_07695 IPR002524 Cation efflux protein CLM98_07695 IPR027469 Cation efflux protein transmembrane domain CLM98_07700 IPR004624 PhnA protein CLM98_07700 IPR013987 PhnA protein, N-terminal CLM98_07700 IPR013988 PhnA protein, C-terminal CLM98_07710 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLM98_07710 IPR013785 Aldolase-type TIM barrel CLM98_07715 IPR011701 Major facilitator superfamily CLM98_07715 IPR036259 CLM98_07715 CLM98_07725 IPR011971 Conserved hypothetical protein CHP02284 CLM98_07725 IPR012347 Ferritin-related CLM98_07725 IPR019052 Domain of unknown function DUF2383 CLM98_07730 IPR004175 2',5' RNA ligase CLM98_07730 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLM98_07735 IPR009218 Predicted HD phosphohydrolase CLM98_07740 IPR019180 Oxidoreductase-like, N-terminal CLM98_07745 IPR010333 Bacterial virulence CLM98_07745 IPR011225 Type IV secretory pathway, VirJ component CLM98_07745 IPR029058 Alpha/Beta hydrolase fold CLM98_07750 IPR016181 Acyl-CoA N-acyltransferase CLM98_07750 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CLM98_07750 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 CLM98_07755 IPR009339 Protein of unknown function DUF998 CLM98_07760 IPR006175 YjgF/Yer057p/UK114 family CLM98_07760 IPR019897 YjgF-like protein, conserved site CLM98_07760 IPR035959 CLM98_07760 CLM98_07765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_07770 IPR010721 Protein of unknown function DUF1295 CLM98_07775 IPR021306 Protein of unknown function DUF2878 CLM98_07780 IPR003333 Mycolic acid cyclopropane synthase CLM98_07780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_07785 IPR010775 Protein of unknown function DUF1365 CLM98_07790 IPR002937 Amine oxidase CLM98_07790 IPR036188 CLM98_07790 CLM98_07795 IPR005804 Fatty acid desaturase, type 1 CLM98_07795 IPR015876 Fatty acid desaturase, type 1, core CLM98_07800 IPR018764 Anti-sigma K factor RskA CLM98_07805 IPR007627 RNA polymerase sigma-70 region 2 CLM98_07805 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_07805 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_07805 IPR013325 RNA polymerase sigma factor, region 2 CLM98_07805 IPR014284 RNA polymerase sigma-70 like domain CLM98_07805 IPR036388 CLM98_07805 CLM98_07825 IPR007202 4Fe-4S domain CLM98_07825 IPR010207 Electron transport complex, RnfB CLM98_07825 IPR011005 Dihydropteroate synthase-like CLM98_07825 IPR016463 Electron transport complex, RnfB, Proteobacteria CLM98_07825 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_07830 IPR023214 HAD-like domain CLM98_07830 IPR036412 CLM98_07830 CLM98_07835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_07835 IPR002547 tRNA-binding domain CLM98_07835 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal CLM98_07835 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_07835 IPR012340 Nucleic acid-binding, OB-fold CLM98_07835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_07835 IPR014758 Methionyl-tRNA synthetase CLM98_07835 IPR015413 Methionyl/Leucyl tRNA synthetase CLM98_07835 IPR023458 Methionine-tRNA ligase, type 1 CLM98_07835 IPR029038 Methionyl-tRNA synthetase, Zn-domain CLM98_07835 IPR033911 CLM98_07835 CLM98_07840 IPR019223 Domain of unknown function DUF2147 CLM98_07845 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLM98_07845 IPR032688 CLM98_07845 CLM98_07850 IPR003439 ABC transporter-like CLM98_07850 IPR003593 AAA+ ATPase domain CLM98_07850 IPR017871 ABC transporter, conserved site CLM98_07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_07855 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_07855 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_07860 IPR002293 Amino acid/polyamine transporter I CLM98_07860 IPR004840 Amino acid permease, conserved site CLM98_07860 IPR004841 Amino acid permease/ SLC12A domain CLM98_07865 IPR003726 Homocysteine S-methyltransferase CLM98_07865 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT CLM98_07865 IPR036589 CLM98_07865 CLM98_07870 IPR010281 Protein of unknown function DUF885 CLM98_07875 IPR003744 Protein of unknown function DUF165 CLM98_07880 IPR007462 Protein of unknown function DUF502 CLM98_07890 IPR025388 Alginate export domain CLM98_07895 IPR005149 Transcription regulator PadR N-terminal CLM98_07895 IPR036388 CLM98_07895 CLM98_07895 IPR036390 CLM98_07895 CLM98_07900 IPR025828 Putative sensor domain CLM98_07905 IPR009656 PHB de-polymerase, C-terminal CLM98_07905 IPR010915 Polyhydroxyalkanoate depolymerase CLM98_07905 IPR029058 Alpha/Beta hydrolase fold CLM98_07910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_07915 IPR005265 Uncharacterised protein family UPF0093 CLM98_07925 IPR011990 Tetratricopeptide-like helical domain CLM98_07925 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing CLM98_07930 IPR001095 Acetyl-CoA carboxylase, alpha subunit CLM98_07930 IPR029045 ClpP/crotonase-like domain CLM98_07935 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLM98_07935 IPR004013 PHP, C-terminal CLM98_07935 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_07935 IPR004805 DNA polymerase III, alpha subunit CLM98_07935 IPR011708 Bacterial DNA polymerase III, alpha subunit CLM98_07935 IPR012340 Nucleic acid-binding, OB-fold CLM98_07935 IPR016195 Polymerase/histidinol phosphatase-like CLM98_07935 IPR029460 DNA polymerase, helix-hairpin-helix motif CLM98_07940 IPR012337 Ribonuclease H-like domain CLM98_07940 IPR022898 Ribonuclease HII CLM98_07940 IPR024567 Ribonuclease HII/HIII domain CLM98_07940 IPR036397 CLM98_07940 CLM98_07945 IPR003835 Glycosyl transferase, family 19 CLM98_07950 IPR001451 Bacterial transferase hexapeptide repeat CLM98_07950 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CLM98_07950 IPR011004 Trimeric LpxA-like CLM98_07950 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal CLM98_07950 IPR037157 CLM98_07950 CLM98_07955 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CLM98_07955 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_07955 IPR029069 HotDog domain CLM98_07960 IPR001451 Bacterial transferase hexapeptide repeat CLM98_07960 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CLM98_07960 IPR011004 Trimeric LpxA-like CLM98_07960 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CLM98_07970 IPR000184 Bacterial surface antigen (D15) CLM98_07970 IPR010827 Surface antigen variable number CLM98_07970 IPR023707 Outer membrane protein assembly factor BamA CLM98_07975 IPR001478 PDZ domain CLM98_07975 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CLM98_07975 IPR008915 Peptidase M50 CLM98_07975 IPR036034 CLM98_07975 CLM98_07980 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLM98_07980 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CLM98_07980 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CLM98_07980 IPR026877 DXP reductoisomerase C-terminal domain CLM98_07980 IPR036169 CLM98_07980 CLM98_07980 IPR036291 CLM98_07980 CLM98_07985 IPR000374 Phosphatidate cytidylyltransferase CLM98_07990 IPR001441 Decaprenyl diphosphate synthase-like CLM98_07990 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CLM98_07990 IPR036424 CLM98_07990 CLM98_07995 IPR002661 Ribosome recycling factor CLM98_07995 IPR023584 Ribosome recycling factor domain CLM98_07995 IPR036191 CLM98_07995 CLM98_08000 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_08000 IPR011817 Uridylate kinase CLM98_08000 IPR015963 Uridylate kinase, bacteria CLM98_08000 IPR036393 CLM98_08000 CLM98_08005 IPR000160 GGDEF domain CLM98_08005 IPR013976 Metal-dependent hydrolase HDOD CLM98_08005 IPR029787 Nucleotide cyclase CLM98_08010 IPR001816 Translation elongation factor EFTs/EF1B CLM98_08010 IPR009060 UBA-like CLM98_08010 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CLM98_08010 IPR018101 Translation elongation factor Ts, conserved site CLM98_08010 IPR036402 CLM98_08010 CLM98_08015 IPR001865 Ribosomal protein S2 CLM98_08015 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CLM98_08015 IPR018130 Ribosomal protein S2, conserved site CLM98_08015 IPR023591 Ribosomal protein S2, flavodoxin-like domain CLM98_08020 IPR008962 PapD-like CLM98_08020 IPR016147 PapD, N-terminal, bacterial CLM98_08030 IPR007893 Spore coat protein U CLM98_08035 IPR000015 Outer membrane usher protein CLM98_08035 IPR025949 PapC-like, C-terminal domain CLM98_08040 IPR008962 PapD-like CLM98_08040 IPR013783 Immunoglobulin-like fold CLM98_08040 IPR016147 PapD, N-terminal, bacterial CLM98_08045 IPR007893 Spore coat protein U CLM98_08050 IPR000994 Peptidase M24, structural domain CLM98_08050 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_08050 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLM98_08050 IPR036005 CLM98_08050 CLM98_08055 IPR002934 Nucleotidyl transferase domain CLM98_08055 IPR003607 HD/PDEase domain CLM98_08055 IPR006674 HD domain CLM98_08055 IPR010043 Protein-PII uridylyltransferase CLM98_08055 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLM98_08060 IPR001451 Bacterial transferase hexapeptide repeat CLM98_08060 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CLM98_08060 IPR011004 Trimeric LpxA-like CLM98_08060 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CLM98_08060 IPR037133 CLM98_08060 CLM98_08065 IPR006504 Transcriptional regulator Spx/MgsR CLM98_08065 IPR006660 Arsenate reductase-like CLM98_08065 IPR036249 CLM98_08065 CLM98_08070 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLM98_08070 IPR002933 Peptidase M20 CLM98_08070 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CLM98_08070 IPR011650 Peptidase M20, dimerisation domain CLM98_08070 IPR036264 CLM98_08070 CLM98_08080 IPR001962 Asparagine synthase CLM98_08080 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_08080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08080 IPR017932 Glutamine amidotransferase type 2 domain CLM98_08080 IPR024286 Domain of unknown function DUF3700 CLM98_08080 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_08085 IPR006626 Parallel beta-helix repeat CLM98_08085 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CLM98_08085 IPR011050 Pectin lyase fold/virulence factor CLM98_08085 IPR012334 Pectin lyase fold CLM98_08085 IPR022441 Parallel beta-helix repeat-2 CLM98_08085 IPR039448 CLM98_08085 CLM98_08090 IPR000531 TonB-dependent receptor, beta-barrel CLM98_08090 IPR010105 TonB-dependent siderophore receptor CLM98_08090 IPR010917 TonB-dependent receptor, conserved site CLM98_08090 IPR012910 TonB-dependent receptor, plug CLM98_08090 IPR036942 CLM98_08090 CLM98_08090 IPR037066 CLM98_08090 CLM98_08105 IPR002024 Bacterioferritin CLM98_08105 IPR008331 Ferritin/DPS protein domain CLM98_08105 IPR009078 Ferritin-like superfamily CLM98_08105 IPR012347 Ferritin-related CLM98_08110 IPR008854 TPMT family CLM98_08110 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification CLM98_08110 IPR025835 Thiopurine S-methyltransferase CLM98_08110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_08120 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLM98_08120 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CLM98_08120 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CLM98_08120 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CLM98_08120 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLM98_08120 IPR013760 DNA topoisomerase, type IIA-like domain CLM98_08120 IPR035516 CLM98_08120 CLM98_08125 IPR003313 AraC-type arabinose-binding/dimerisation domain CLM98_08125 IPR009057 Homeodomain-like CLM98_08125 IPR011051 RmlC-like cupin domain CLM98_08125 IPR014710 RmlC-like jelly roll fold CLM98_08125 IPR018060 DNA binding HTH domain, AraC-type CLM98_08125 IPR020449 Transcription regulator HTH, AraC- type CLM98_08130 IPR000835 MarR-type HTH domain CLM98_08130 IPR023187 Transcriptional regulator MarR-type, conserved site CLM98_08130 IPR036388 CLM98_08130 CLM98_08130 IPR036390 CLM98_08130 CLM98_08135 IPR003423 Outer membrane efflux protein CLM98_08135 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_08140 IPR006143 RND efflux pump, membrane fusion protein CLM98_08140 IPR032317 CLM98_08140 CLM98_08145 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLM98_08145 IPR011701 Major facilitator superfamily CLM98_08145 IPR036259 CLM98_08145 CLM98_08155 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_08155 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_08155 IPR013783 Immunoglobulin-like fold CLM98_08155 IPR017853 Glycoside hydrolase, superfamily CLM98_08155 IPR026891 Fibronectin type III-like domain CLM98_08155 IPR036881 CLM98_08155 CLM98_08155 IPR036962 CLM98_08155 CLM98_08160 IPR000834 Peptidase M14, carboxypeptidase A CLM98_08165 IPR000109 Proton-dependent oligopeptide transporter family CLM98_08165 IPR005279 Amino acid/peptide transporter family CLM98_08165 IPR036259 CLM98_08165 CLM98_08170 IPR022764 Peptidase S54, rhomboid domain CLM98_08170 IPR035952 CLM98_08170 CLM98_08180 IPR016181 Acyl-CoA N-acyltransferase CLM98_08180 IPR031165 CLM98_08180 CLM98_08190 IPR000835 MarR-type HTH domain CLM98_08190 IPR036388 CLM98_08190 CLM98_08190 IPR036390 CLM98_08190 CLM98_08195 IPR001567 Peptidase M3A/M3B CLM98_08195 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_08205 IPR000889 Glutathione peroxidase CLM98_08205 IPR029759 Glutathione peroxidase active site CLM98_08205 IPR036249 CLM98_08205 CLM98_08210 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_08210 IPR008333 Oxidoreductase, FAD-binding domain CLM98_08210 IPR017938 Riboflavin synthase-like beta-barrel CLM98_08210 IPR039261 CLM98_08210 CLM98_08215 IPR003439 ABC transporter-like CLM98_08215 IPR003593 AAA+ ATPase domain CLM98_08215 IPR017871 ABC transporter, conserved site CLM98_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08215 IPR036640 CLM98_08215 CLM98_08220 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CLM98_08220 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CLM98_08220 IPR011167 Iron-dependent fumarate hydratase CLM98_08220 IPR036660 CLM98_08220 CLM98_08225 IPR004045 Glutathione S-transferase, N-terminal CLM98_08225 IPR004046 Glutathione S-transferase, C-terminal CLM98_08225 IPR036249 CLM98_08225 CLM98_08225 IPR036282 CLM98_08225 CLM98_08230 IPR001765 Carbonic anhydrase CLM98_08230 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08230 IPR036874 CLM98_08230 CLM98_08235 IPR003187 Phospholipase A1 CLM98_08235 IPR036541 CLM98_08235 CLM98_08240 IPR007403 Protein of unknown function DUF456 CLM98_08245 IPR002059 Cold-shock protein, DNA-binding CLM98_08245 IPR011129 Cold shock protein CLM98_08245 IPR012156 Cold shock, CspA CLM98_08245 IPR012340 Nucleic acid-binding, OB-fold CLM98_08245 IPR019844 Cold-shock conserved site CLM98_08250 IPR008816 Glycine zipper 2TM domain CLM98_08255 IPR002321 Cytochrome c, class II CLM98_08255 IPR010980 Cytochrome c/b562 CLM98_08260 IPR000594 UBA/THIF-type NAD/FAD binding fold CLM98_08260 IPR035985 CLM98_08260 CLM98_08275 IPR008816 Glycine zipper 2TM domain CLM98_08280 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_08280 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_08280 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08280 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_08280 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_08280 IPR036250 CLM98_08280 CLM98_08280 IPR037069 CLM98_08280 CLM98_08285 IPR002931 Transglutaminase-like CLM98_08285 IPR024618 Domain of unknown function DUF3857 CLM98_08285 IPR038765 CLM98_08285 CLM98_08290 IPR004045 Glutathione S-transferase, N-terminal CLM98_08290 IPR004046 Glutathione S-transferase, C-terminal CLM98_08290 IPR036249 CLM98_08290 CLM98_08290 IPR036282 CLM98_08290 CLM98_08300 IPR001962 Asparagine synthase CLM98_08300 IPR006426 Asparagine synthase, glutamine-hydrolyzing CLM98_08300 IPR017932 Glutamine amidotransferase type 2 domain CLM98_08300 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_08305 IPR005025 NADPH-dependent FMN reductase-like CLM98_08305 IPR029039 Flavoprotein-like CLM98_08310 IPR007692 DNA helicase, DnaB type CLM98_08310 IPR007693 DNA helicase, DnaB-like, N-terminal CLM98_08310 IPR007694 DNA helicase, DnaB-like, C-terminal CLM98_08310 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLM98_08310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08310 IPR036185 CLM98_08310 CLM98_08315 IPR002081 Cryptochrome/DNA photolyase, class 1 CLM98_08315 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal CLM98_08315 IPR006050 DNA photolyase, N-terminal CLM98_08315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08315 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal CLM98_08315 IPR036134 CLM98_08315 CLM98_08315 IPR036155 CLM98_08315 CLM98_08325 IPR006664 Outer membrane protein, bacterial CLM98_08325 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_08325 IPR006690 Outer membrane protein, OmpA-like, conserved site CLM98_08325 IPR036737 CLM98_08325 CLM98_08325 IPR039567 CLM98_08325 CLM98_08330 IPR000847 Transcription regulator HTH, LysR CLM98_08330 IPR005119 LysR, substrate-binding CLM98_08330 IPR036388 CLM98_08330 CLM98_08330 IPR036390 CLM98_08330 CLM98_08340 IPR002347 Glucose/ribitol dehydrogenase CLM98_08340 IPR036291 CLM98_08340 CLM98_08345 IPR006143 RND efflux pump, membrane fusion protein CLM98_08345 IPR032317 CLM98_08345 CLM98_08350 IPR001036 Acriflavin resistance protein CLM98_08350 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_08350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_08355 IPR002347 Glucose/ribitol dehydrogenase CLM98_08355 IPR036291 CLM98_08355 CLM98_08360 IPR003423 Outer membrane efflux protein CLM98_08360 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_08365 IPR000160 GGDEF domain CLM98_08365 IPR029787 Nucleotide cyclase CLM98_08375 IPR000160 GGDEF domain CLM98_08375 IPR003018 GAF domain CLM98_08375 IPR007891 CHASE3 CLM98_08375 IPR029016 GAF domain-like CLM98_08375 IPR029787 Nucleotide cyclase CLM98_08380 IPR001962 Asparagine synthase CLM98_08380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08385 IPR001962 Asparagine synthase CLM98_08385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_08395 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_08395 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_08400 IPR010359 Protein of unknown function DUF955 CLM98_08410 IPR001801 Histone-like protein H-NS CLM98_08410 IPR027444 Histone-like protein H-NS, C-terminal domain CLM98_08420 IPR002104 Integrase, catalytic CLM98_08420 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_08420 IPR013762 Integrase-like, catalytic core CLM98_08440 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_08440 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_08445 IPR003812 Fido domain CLM98_08445 IPR036597 CLM98_08445 CLM98_08455 IPR011990 Tetratricopeptide-like helical domain CLM98_08470 IPR005053 MobA/MobL protein CLM98_08480 IPR025209 Domain of unknown function DUF4209 CLM98_08485 IPR002104 Integrase, catalytic CLM98_08485 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_08485 IPR013762 Integrase-like, catalytic core CLM98_08495 IPR000209 Peptidase S8/S53 domain CLM98_08495 IPR015500 Peptidase S8, subtilisin-related CLM98_08495 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_08495 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_08495 IPR029058 Alpha/Beta hydrolase fold CLM98_08495 IPR036852 CLM98_08495 CLM98_08500 IPR000037 SsrA-binding protein CLM98_08500 IPR020081 SsrA-binding protein, conserved site CLM98_08500 IPR023620 Small protein B CLM98_08505 IPR005031 Streptomyces cyclase/dehydrase CLM98_08505 IPR023393 START-like domain CLM98_08510 IPR005346 RnfH protein CLM98_08510 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLM98_08510 IPR037021 CLM98_08510 CLM98_08515 IPR007450 Lipoprotein SmpA/OmlA CLM98_08515 IPR026592 Outer membrane protein assembly factor BamE CLM98_08515 IPR037873 CLM98_08515 CLM98_08520 IPR002481 Ferric-uptake regulator CLM98_08520 IPR036388 CLM98_08520 CLM98_08520 IPR036390 CLM98_08520 CLM98_08525 IPR003395 RecF/RecN/SMC, N-terminal CLM98_08525 IPR004604 DNA recombination/repair protein RecN CLM98_08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08530 IPR002571 Heat-inducible transcription repressor HrcA CLM98_08530 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain CLM98_08530 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CLM98_08530 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain CLM98_08530 IPR029016 GAF domain-like CLM98_08530 IPR036388 CLM98_08530 CLM98_08530 IPR036390 CLM98_08530 CLM98_08535 IPR000740 GrpE nucleotide exchange factor CLM98_08535 IPR009012 GrpE nucleotide exchange factor, head CLM98_08535 IPR013805 GrpE nucleotide exchange factor, coiled-coil CLM98_08540 IPR012725 Chaperone DnaK CLM98_08540 IPR013126 Heat shock protein 70 family CLM98_08540 IPR018181 Heat shock protein 70, conserved site CLM98_08540 IPR029047 Heat shock protein 70kD, peptide-binding domain CLM98_08540 IPR029048 Heat shock protein 70kD, C-terminal domain CLM98_08545 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CLM98_08545 IPR001623 DnaJ domain CLM98_08545 IPR002939 Chaperone DnaJ, C-terminal CLM98_08545 IPR008971 HSP40/DnaJ peptide-binding CLM98_08545 IPR012724 Chaperone DnaJ CLM98_08545 IPR036410 CLM98_08545 CLM98_08545 IPR036869 CLM98_08545 CLM98_08555 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase CLM98_08555 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLM98_08555 IPR029056 Ribokinase-like CLM98_08560 IPR002912 ACT domain CLM98_08560 IPR003099 Prephenate dehydrogenase CLM98_08560 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_08560 IPR036291 CLM98_08560 CLM98_08570 IPR003423 Outer membrane efflux protein CLM98_08575 IPR032317 CLM98_08575 CLM98_08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08580 IPR036640 CLM98_08580 CLM98_08585 IPR000847 Transcription regulator HTH, LysR CLM98_08585 IPR005119 LysR, substrate-binding CLM98_08585 IPR036388 CLM98_08585 CLM98_08585 IPR036390 CLM98_08585 CLM98_08590 IPR003439 ABC transporter-like CLM98_08590 IPR003593 AAA+ ATPase domain CLM98_08590 IPR011527 ABC transporter type 1, transmembrane domain CLM98_08590 IPR011918 ABC transporter, ATP-binding/permease protein CLM98_08590 IPR017871 ABC transporter, conserved site CLM98_08590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08590 IPR036640 CLM98_08590 CLM98_08595 IPR001498 Impact, N-terminal CLM98_08595 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CLM98_08595 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_08595 IPR035647 CLM98_08595 CLM98_08595 IPR036956 CLM98_08595 CLM98_08600 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CLM98_08600 IPR031100 CLM98_08600 CLM98_08605 IPR001100 CLM98_08605 CLM98_08605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_08605 IPR006258 Dihydrolipoamide dehydrogenase CLM98_08605 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_08605 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLM98_08605 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_08605 IPR036188 CLM98_08605 CLM98_08610 IPR000089 Biotin/lipoyl attachment CLM98_08610 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_08610 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_08610 IPR004167 E3 binding CLM98_08610 IPR006255 Dihydrolipoamide succinyltransferase CLM98_08610 IPR011053 Single hybrid motif CLM98_08610 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_08610 IPR036625 CLM98_08610 CLM98_08615 IPR001017 Dehydrogenase, E1 component CLM98_08615 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_08615 IPR011603 2-oxoglutarate dehydrogenase E1 component CLM98_08615 IPR029061 Thiamin diphosphate-binding fold CLM98_08615 IPR031717 CLM98_08615 CLM98_08615 IPR032106 CLM98_08615 CLM98_08620 IPR000182 GNAT domain CLM98_08620 IPR016181 Acyl-CoA N-acyltransferase CLM98_08625 IPR003347 JmjC domain CLM98_08630 IPR021417 Protein of unknown function DUF3060 CLM98_08635 IPR000362 Fumarate lyase family CLM98_08635 IPR004769 Adenylosuccinate lyase CLM98_08635 IPR008948 L-Aspartase-like CLM98_08635 IPR013539 Adenylosuccinate lyase PurB, C-terminal CLM98_08635 IPR020557 Fumarate lyase, conserved site CLM98_08635 IPR022761 Fumarate lyase, N-terminal CLM98_08635 IPR024083 Fumarase/histidase, N-terminal CLM98_08640 IPR014044 CAP domain CLM98_08640 IPR035940 CLM98_08640 CLM98_08645 IPR000644 CBS domain CLM98_08645 IPR002550 Domain of unknown function DUF21 CLM98_08645 IPR005170 Transporter-associated domain CLM98_08645 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_08645 IPR036318 CLM98_08645 CLM98_08650 IPR000362 Fumarate lyase family CLM98_08650 IPR005677 Fumarate hydratase, class II CLM98_08650 IPR008948 L-Aspartase-like CLM98_08650 IPR018951 Fumarase C, C-terminal CLM98_08650 IPR020557 Fumarate lyase, conserved site CLM98_08650 IPR022761 Fumarate lyase, N-terminal CLM98_08650 IPR024083 Fumarase/histidase, N-terminal CLM98_08660 IPR021307 Protein of unknown function DUF2884 CLM98_08675 IPR003439 ABC transporter-like CLM98_08675 IPR003593 AAA+ ATPase domain CLM98_08675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08680 IPR000524 Transcription regulator HTH, GntR CLM98_08680 IPR036388 CLM98_08680 CLM98_08680 IPR036390 CLM98_08680 CLM98_08690 IPR000889 Glutathione peroxidase CLM98_08690 IPR029759 Glutathione peroxidase active site CLM98_08690 IPR036249 CLM98_08690 CLM98_08695 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CLM98_08695 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLM98_08695 IPR036944 CLM98_08695 CLM98_08700 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_08700 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_08700 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_08700 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_08700 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_08700 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CLM98_08700 IPR036220 CLM98_08700 CLM98_08700 IPR036291 CLM98_08700 CLM98_08705 IPR007236 SlyX CLM98_08710 IPR018636 Protein of unknown function DUF2058 CLM98_08715 IPR025737 MetA-pathway of phenol degradation, putative CLM98_08720 IPR000843 Transcription regulator HTH, LacI CLM98_08720 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_08720 IPR028082 Periplasmic binding protein-like I CLM98_08725 IPR005275 L-fucose permease FucP CLM98_08725 IPR005964 Bacterial glucose/galactose transporter CLM98_08725 IPR011701 Major facilitator superfamily CLM98_08725 IPR036259 CLM98_08725 CLM98_08730 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_08730 IPR011611 Carbohydrate kinase PfkB CLM98_08730 IPR029056 Ribokinase-like CLM98_08735 IPR008928 Six-hairpin glycosidase-like CLM98_08735 IPR012341 Six-hairpin glycosidase CLM98_08740 IPR000489 Pterin-binding CLM98_08740 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLM98_08740 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CLM98_08740 IPR006158 Cobalamin (vitamin B12)-binding domain CLM98_08740 IPR011005 Dihydropteroate synthase-like CLM98_08740 IPR011822 Cobalamin-dependent methionine synthase CLM98_08740 IPR036594 CLM98_08740 CLM98_08740 IPR036724 CLM98_08740 CLM98_08740 IPR037010 CLM98_08740 CLM98_08745 IPR003726 Homocysteine S-methyltransferase CLM98_08745 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT CLM98_08745 IPR036589 CLM98_08745 CLM98_08750 IPR001845 HTH ArsR-type DNA-binding domain CLM98_08750 IPR013216 Methyltransferase type 11 CLM98_08750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_08750 IPR036388 CLM98_08750 CLM98_08750 IPR036390 CLM98_08750 CLM98_08755 IPR006089 Acyl-CoA dehydrogenase, conserved site CLM98_08755 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_08755 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_08755 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_08755 IPR036250 CLM98_08755 CLM98_08755 IPR037069 CLM98_08755 CLM98_08760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_08760 IPR036250 CLM98_08760 CLM98_08770 IPR013830 CLM98_08770 CLM98_08770 IPR036514 CLM98_08770 CLM98_08780 IPR001900 CLM98_08780 CLM98_08780 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_08780 IPR004476 Ribonuclease II/ribonuclease R CLM98_08780 IPR011129 Cold shock protein CLM98_08780 IPR011805 Ribonuclease R CLM98_08780 IPR012340 Nucleic acid-binding, OB-fold CLM98_08780 IPR013223 Ribonuclease B, N-terminal OB domain CLM98_08780 IPR022966 Ribonuclease II/R, conserved site CLM98_08780 IPR022967 RNA-binding domain, S1 CLM98_08785 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CLM98_08785 IPR011057 Mss4-like CLM98_08790 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_08790 IPR004441 RNA methyltransferase TrmH family CLM98_08790 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLM98_08790 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CLM98_08790 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_08790 IPR029028 Alpha/beta knot methyltransferases CLM98_08790 IPR029064 50S ribosomal protein L30e-like CLM98_08800 IPR000160 GGDEF domain CLM98_08800 IPR011110 Two component regulator propeller CLM98_08800 IPR011123 Two component regulator three Y CLM98_08800 IPR013783 Immunoglobulin-like fold CLM98_08800 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_08800 IPR029787 Nucleotide cyclase CLM98_08805 IPR005987 Ribonuclease T CLM98_08805 IPR012337 Ribonuclease H-like domain CLM98_08805 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_08805 IPR036397 CLM98_08805 CLM98_08810 IPR024572 Protein of unknown function DUF3315 CLM98_08815 IPR026022 PhoU domain CLM98_08815 IPR028366 Phosphate transport system protein PhoU CLM98_08815 IPR038078 CLM98_08815 CLM98_08820 IPR003439 ABC transporter-like CLM98_08820 IPR003593 AAA+ ATPase domain CLM98_08820 IPR005670 Phosphate transport system permease protein 1 CLM98_08820 IPR017871 ABC transporter, conserved site CLM98_08820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08825 IPR000515 MetI-like domain CLM98_08825 IPR005672 Phosphate transport system permease protein PstA CLM98_08825 IPR035906 CLM98_08825 CLM98_08830 IPR000515 MetI-like domain CLM98_08830 IPR011864 Phosphate ABC transporter, permease protein PstC CLM98_08830 IPR035906 CLM98_08830 CLM98_08835 IPR005673 ABC transporter, phosphate-binding protein PstS CLM98_08835 IPR024370 PBP domain CLM98_08840 IPR005673 ABC transporter, phosphate-binding protein PstS CLM98_08840 IPR024370 PBP domain CLM98_08845 IPR010870 Phosphate-selective porin O/P CLM98_08845 IPR023614 Porin domain CLM98_08855 IPR001765 Carbonic anhydrase CLM98_08855 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08855 IPR036874 CLM98_08855 CLM98_08860 IPR011547 Sulphate transporter CLM98_08860 IPR036513 CLM98_08860 CLM98_08865 IPR000445 Helix-hairpin-helix motif CLM98_08865 IPR003265 HhH-GPD domain CLM98_08865 IPR004036 Endonuclease III-like, conserved site-2 CLM98_08865 IPR005759 Endonuclease III CLM98_08865 IPR011257 DNA glycosylase CLM98_08865 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLM98_08875 IPR001753 Crotonase superfamily CLM98_08875 IPR014748 Crontonase, C-terminal CLM98_08875 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLM98_08875 IPR029045 ClpP/crotonase-like domain CLM98_08880 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CLM98_08880 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLM98_08880 IPR036944 CLM98_08880 CLM98_08885 IPR000086 NUDIX hydrolase domain CLM98_08885 IPR010710 Protein of unknown function DUF1289 CLM98_08885 IPR015797 NUDIX hydrolase domain-like CLM98_08890 IPR001763 Rhodanese-like domain CLM98_08890 IPR036873 CLM98_08890 CLM98_08895 IPR012467 Protein of unknown function DUF1684 CLM98_08900 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLM98_08900 IPR036505 CLM98_08900 CLM98_08905 IPR005302 Molybdenum cofactor sulfurase, C-terminal CLM98_08905 IPR011037 Pyruvate kinase-like, insert domain CLM98_08910 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CLM98_08910 IPR029058 Alpha/Beta hydrolase fold CLM98_08915 IPR000182 GNAT domain CLM98_08915 IPR016181 Acyl-CoA N-acyltransferase CLM98_08920 IPR003439 ABC transporter-like CLM98_08920 IPR003593 AAA+ ATPase domain CLM98_08920 IPR017871 ABC transporter, conserved site CLM98_08920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_08930 IPR000241 Putative RNA methylase domain CLM98_08930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_08930 IPR004114 THUMP CLM98_08930 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CLM98_08930 IPR019614 S-adenosylmethionine-dependent methyltransferase CLM98_08930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_08935 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CLM98_08935 IPR016064 ATP-NAD kinase-like domain CLM98_08935 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CLM98_08935 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CLM98_08940 IPR010394 5-nucleotidase CLM98_08945 IPR021330 Protein of unknown function DUF2939 CLM98_08955 IPR012808 Conserved hypothetical protein CHP02453 CLM98_08955 IPR015996 Uncharacterised conserved protein UCP028451 CLM98_08960 IPR012337 Ribonuclease H-like domain CLM98_08960 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_08960 IPR013620 Exonuclease C-terminal CLM98_08960 IPR023607 Exodeoxyribonuclease I CLM98_08960 IPR036397 CLM98_08960 CLM98_08960 IPR038649 CLM98_08960 CLM98_08970 IPR002938 Monooxygenase, FAD-binding CLM98_08970 IPR027545 Kynurenine 3-monooxygenase CLM98_08970 IPR036188 CLM98_08970 CLM98_08975 IPR000192 Aminotransferase class V domain CLM98_08975 IPR010111 Kynureninase CLM98_08975 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_08975 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_08975 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_08980 IPR032692 CLM98_08980 CLM98_08985 IPR010329 3-hydroxyanthranilic acid dioxygenase CLM98_08985 IPR011051 RmlC-like cupin domain CLM98_08985 IPR014710 RmlC-like jelly roll fold CLM98_08990 IPR001765 Carbonic anhydrase CLM98_08990 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLM98_08990 IPR036874 CLM98_08990 CLM98_08995 IPR008565 Protein of unknown function DUF847 CLM98_08995 IPR018537 Peptidoglycan binding domain CLM98_08995 IPR023346 Lysozyme-like domain CLM98_09005 IPR024510 Protein of unknown function DUF2589 CLM98_09035 IPR000792 Transcription regulator LuxR, C-terminal CLM98_09035 IPR001789 Signal transduction response regulator, receiver domain CLM98_09035 IPR011006 CheY-like superfamily CLM98_09035 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_09040 IPR001574 Ribosome-inactivating protein CLM98_09040 IPR036041 CLM98_09040 CLM98_09055 IPR007396 Transcriptional regulator PAI 2-type CLM98_09055 IPR012349 FMN-binding split barrel CLM98_09075 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLM98_09075 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_09075 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_09075 IPR004522 Asparagine-tRNA ligase CLM98_09075 IPR012340 Nucleic acid-binding, OB-fold CLM98_09085 IPR000361 FeS cluster biogenesis CLM98_09085 IPR016092 FeS cluster insertion protein CLM98_09085 IPR017870 FeS cluster insertion, C-terminal, conserved site CLM98_09085 IPR035903 CLM98_09085 CLM98_09090 IPR000529 Ribosomal protein S6 CLM98_09090 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLM98_09090 IPR020814 Ribosomal protein S6, plastid/chloroplast CLM98_09090 IPR035980 CLM98_09090 CLM98_09095 IPR001648 Ribosomal protein S18 CLM98_09095 IPR018275 Ribosomal protein S18, conserved site CLM98_09095 IPR036870 CLM98_09095 CLM98_09100 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLM98_09100 IPR020069 Ribosomal protein L9, C-terminal CLM98_09100 IPR020070 Ribosomal protein L9, N-terminal CLM98_09100 IPR020594 Ribosomal protein L9, bacteria/chloroplast CLM98_09100 IPR036791 CLM98_09100 CLM98_09100 IPR036935 CLM98_09100 CLM98_09105 IPR003395 RecF/RecN/SMC, N-terminal CLM98_09105 IPR010935 SMCs flexible hinge CLM98_09105 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CLM98_09105 IPR024704 Structural maintenance of chromosomes protein CLM98_09105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09105 IPR036277 CLM98_09105 CLM98_09110 IPR007449 ZipA, C-terminal FtsZ-binding domain CLM98_09110 IPR011919 Cell division protein ZipA CLM98_09110 IPR036765 CLM98_09110 CLM98_09120 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLM98_09120 IPR004839 Aminotransferase, class I/classII CLM98_09120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_09120 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_09120 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09125 IPR001357 BRCT domain CLM98_09125 IPR001679 NAD-dependent DNA ligase CLM98_09125 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CLM98_09125 IPR004150 NAD-dependent DNA ligase, OB-fold CLM98_09125 IPR010994 RuvA domain 2-like CLM98_09125 IPR012340 Nucleic acid-binding, OB-fold CLM98_09125 IPR013839 NAD-dependent DNA ligase, adenylation CLM98_09125 IPR013840 NAD-dependent DNA ligase, N-terminal CLM98_09125 IPR018239 NAD-dependent DNA ligase, active site CLM98_09125 IPR036420 CLM98_09125 CLM98_09130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_09130 IPR004525 Elongation factor P--(R)-beta-lysine ligase CLM98_09130 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLM98_09135 IPR021381 Protein of unknown function DUF3011 CLM98_09145 IPR000649 Initiation factor 2B-related CLM98_09145 IPR005251 Methylthioribose-1-phosphate isomerase CLM98_09145 IPR011559 Initiation factor 2B alpha/beta/delta CLM98_09145 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain CLM98_09145 IPR037171 CLM98_09145 CLM98_09150 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLM98_09150 IPR005743 DNA gyrase, subunit A CLM98_09150 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CLM98_09150 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CLM98_09150 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLM98_09150 IPR013760 DNA topoisomerase, type IIA-like domain CLM98_09150 IPR035516 CLM98_09150 CLM98_09165 IPR023636 Urocanase conserved site CLM98_09165 IPR023637 Urocanase CLM98_09165 IPR035085 CLM98_09165 CLM98_09165 IPR035400 CLM98_09165 CLM98_09165 IPR035401 CLM98_09165 CLM98_09165 IPR036190 CLM98_09165 CLM98_09165 IPR038364 CLM98_09165 CLM98_09170 IPR007709 N-formylglutamate amidohydrolase CLM98_09170 IPR010247 N-formylglutamate deformylase CLM98_09175 IPR001106 Aromatic amino acid lyase CLM98_09175 IPR005921 Histidine ammonia-lyase CLM98_09175 IPR008948 L-Aspartase-like CLM98_09175 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CLM98_09175 IPR024083 Fumarase/histidase, N-terminal CLM98_09180 IPR005920 Imidazolonepropionase CLM98_09180 IPR011059 Metal-dependent hydrolase, composite domain CLM98_09180 IPR013108 Amidohydrolase 3 CLM98_09180 IPR032466 CLM98_09180 CLM98_09185 IPR006680 Amidohydrolase 1 CLM98_09185 IPR010252 Formiminoglutamate deiminase CLM98_09185 IPR011059 Metal-dependent hydrolase, composite domain CLM98_09185 IPR032466 CLM98_09185 CLM98_09195 IPR000524 Transcription regulator HTH, GntR CLM98_09195 IPR010248 Histidine utilization repressor CLM98_09195 IPR011663 UbiC transcription regulator-associated CLM98_09195 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLM98_09195 IPR036388 CLM98_09195 CLM98_09195 IPR036390 CLM98_09195 CLM98_09200 IPR007560 Restriction endonuclease type IV, Mrr CLM98_09210 IPR008769 Poly granule associated CLM98_09215 IPR013433 Putative polyhydroxyalkanoic acid system protein CLM98_09220 IPR000253 Forkhead-associated (FHA) domain CLM98_09220 IPR008984 SMAD/FHA domain CLM98_09220 IPR032030 CLM98_09220 CLM98_09225 IPR013130 Ferric reductase transmembrane component-like domain CLM98_09225 IPR022837 Sulphoxide reductase heme-binding subunit YedZ CLM98_09230 IPR000572 Oxidoreductase, molybdopterin-binding domain CLM98_09230 IPR022867 Sulphoxide reductase catalytic subunit YedY CLM98_09230 IPR036374 CLM98_09230 CLM98_09235 IPR000192 Aminotransferase class V domain CLM98_09235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_09235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_09235 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09235 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLM98_09235 IPR022278 Phosphoserine aminotransferase CLM98_09240 IPR001086 Prephenate dehydratase CLM98_09240 IPR002701 Chorismate mutase CLM98_09240 IPR002912 ACT domain CLM98_09240 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CLM98_09240 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CLM98_09240 IPR036263 CLM98_09240 CLM98_09240 IPR036979 CLM98_09240 CLM98_09245 IPR001986 Enolpyruvate transferase domain CLM98_09245 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CLM98_09245 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLM98_09245 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CLM98_09245 IPR036968 CLM98_09245 CLM98_09250 IPR006260 TonB, C-terminal CLM98_09250 IPR037682 CLM98_09250 CLM98_09255 IPR006260 TonB, C-terminal CLM98_09255 IPR037682 CLM98_09255 CLM98_09260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLM98_09260 IPR002317 Serine-tRNA ligase, type1 CLM98_09260 IPR010978 tRNA-binding arm CLM98_09260 IPR015866 Serine-tRNA synthetase, type1, N-terminal CLM98_09265 IPR003680 Flavodoxin-like fold CLM98_09265 IPR023048 NADH-azoreductase, FMN-dependent CLM98_09265 IPR029039 Flavoprotein-like CLM98_09270 IPR000847 Transcription regulator HTH, LysR CLM98_09270 IPR005119 LysR, substrate-binding CLM98_09270 IPR036388 CLM98_09270 CLM98_09270 IPR036390 CLM98_09270 CLM98_09280 IPR010260 Bacteriophage P4, Orf88 CLM98_09305 IPR003450 Replication origin-binding protein CLM98_09305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09310 IPR010260 Bacteriophage P4, Orf88 CLM98_09315 IPR002104 Integrase, catalytic CLM98_09315 IPR010998 Integrase, Lambda-type, N-terminal CLM98_09315 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_09315 IPR013762 Integrase-like, catalytic core CLM98_09315 IPR025166 Domain of unknown function DUF4102 CLM98_09315 IPR038488 CLM98_09315 CLM98_09320 IPR007438 Protein of unknown function DUF488 CLM98_09320 IPR014519 Uncharacterised conserved protein UCP024492 CLM98_09325 IPR003660 HAMP linker domain CLM98_09325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_09325 IPR024478 4HB MCP domain CLM98_09330 IPR002938 Monooxygenase, FAD-binding CLM98_09330 IPR036188 CLM98_09330 CLM98_09335 IPR000835 MarR-type HTH domain CLM98_09335 IPR036388 CLM98_09335 CLM98_09335 IPR036390 CLM98_09335 CLM98_09345 IPR000014 PAS domain CLM98_09345 IPR001610 PAC motif CLM98_09345 IPR001789 Signal transduction response regulator, receiver domain CLM98_09345 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_09345 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_09345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_09345 IPR011006 CheY-like superfamily CLM98_09345 IPR013655 PAS fold-3 CLM98_09345 IPR013656 PAS fold-4 CLM98_09345 IPR013767 PAS fold CLM98_09345 IPR035965 CLM98_09345 CLM98_09345 IPR036097 CLM98_09345 CLM98_09345 IPR036890 CLM98_09345 CLM98_09350 IPR001789 Signal transduction response regulator, receiver domain CLM98_09350 IPR011006 CheY-like superfamily CLM98_09360 IPR003593 AAA+ ATPase domain CLM98_09360 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA CLM98_09360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09360 IPR030665 CLM98_09360 CLM98_09365 IPR000014 PAS domain CLM98_09365 IPR001789 Signal transduction response regulator, receiver domain CLM98_09365 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_09365 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_09365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_09365 IPR011006 CheY-like superfamily CLM98_09365 IPR013656 PAS fold-4 CLM98_09365 IPR035965 CLM98_09365 CLM98_09365 IPR036097 CLM98_09365 CLM98_09365 IPR036890 CLM98_09365 CLM98_09370 IPR011990 Tetratricopeptide-like helical domain CLM98_09375 IPR005616 Cytochrome C biogenesis protein CcmH CLM98_09375 IPR038297 CLM98_09375 CLM98_09380 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_09380 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLM98_09380 IPR036249 CLM98_09380 CLM98_09385 IPR002541 Cytochrome c assembly protein CLM98_09385 IPR003567 Cytochrome c-type biogenesis protein CLM98_09385 IPR003568 Cytochrome c-type biogenesis protein CcmF CLM98_09385 IPR032523 CLM98_09385 CLM98_09390 IPR004329 CcmE/CycJ protein CLM98_09390 IPR036127 CLM98_09390 CLM98_09395 IPR007078 Haem exporter protein D (CcmD) CLM98_09400 IPR002541 Cytochrome c assembly protein CLM98_09400 IPR003557 Cytochrome c-type biogenesis protein CcmC CLM98_09405 IPR000209 Peptidase S8/S53 domain CLM98_09405 IPR015500 Peptidase S8, subtilisin-related CLM98_09405 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_09405 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_09405 IPR036852 CLM98_09405 CLM98_09410 IPR027383 Putative zinc-finger CLM98_09415 IPR007627 RNA polymerase sigma-70 region 2 CLM98_09415 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_09415 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_09415 IPR013325 RNA polymerase sigma factor, region 2 CLM98_09415 IPR014284 RNA polymerase sigma-70 like domain CLM98_09415 IPR036388 CLM98_09415 CLM98_09430 IPR002327 Cytochrome c, class IA/ IB CLM98_09430 IPR009056 Cytochrome c-like domain CLM98_09430 IPR036909 CLM98_09430 CLM98_09440 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLM98_09440 IPR016174 Di-haem cytochrome, transmembrane CLM98_09445 IPR008894 WxcM-like, C-terminal CLM98_09445 IPR011051 RmlC-like cupin domain CLM98_09445 IPR014710 RmlC-like jelly roll fold CLM98_09450 IPR001451 Bacterial transferase hexapeptide repeat CLM98_09450 IPR011004 Trimeric LpxA-like CLM98_09450 IPR018357 Hexapeptide transferase, conserved site CLM98_09450 IPR020019 Sialic acid O-acyltransferase, NeuD CLM98_09455 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_09460 IPR016181 Acyl-CoA N-acyltransferase CLM98_09460 IPR038740 CLM98_09460 CLM98_09465 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLM98_09465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_09465 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_09465 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_09475 IPR001173 Glycosyltransferase 2-like CLM98_09475 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_09485 IPR003856 Lipopolysaccharide biosynthesis CLM98_09490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_09495 IPR006680 Amidohydrolase 1 CLM98_09495 IPR011059 Metal-dependent hydrolase, composite domain CLM98_09495 IPR032466 CLM98_09495 CLM98_09505 IPR013216 Methyltransferase type 11 CLM98_09505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_09510 IPR001296 Glycosyl transferase, family 1 CLM98_09510 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_09515 IPR001296 Glycosyl transferase, family 1 CLM98_09515 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_09520 IPR039498 CLM98_09520 CLM98_09525 IPR006638 Elongator protein 3/MiaB/NifB CLM98_09525 IPR007197 Radical SAM CLM98_09525 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_09535 IPR003439 ABC transporter-like CLM98_09535 IPR003593 AAA+ ATPase domain CLM98_09535 IPR017871 ABC transporter, conserved site CLM98_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09535 IPR036640 CLM98_09535 CLM98_09540 IPR005828 General substrate transporter CLM98_09540 IPR005829 Sugar transporter, conserved site CLM98_09540 IPR036259 CLM98_09540 CLM98_09545 IPR011251 Luciferase-like domain CLM98_09545 IPR019949 Luciferase family oxidoreductase, group 1 CLM98_09545 IPR036661 CLM98_09545 CLM98_09550 IPR012349 FMN-binding split barrel CLM98_09550 IPR038725 CLM98_09550 CLM98_09555 IPR010331 Exopolysaccharide synthesis, ExoD CLM98_09560 IPR000644 CBS domain CLM98_09560 IPR002550 Domain of unknown function DUF21 CLM98_09560 IPR005170 Transporter-associated domain CLM98_09560 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_09560 IPR036318 CLM98_09560 CLM98_09570 IPR018445 Putitive phosphate transport regulator CLM98_09570 IPR038078 CLM98_09570 CLM98_09575 IPR001204 Phosphate transporter CLM98_09580 IPR003848 Domain of unknown function DUF218 CLM98_09580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_09585 IPR001563 Peptidase S10, serine carboxypeptidase CLM98_09585 IPR018202 Peptidase S10, serine carboxypeptidase, active site CLM98_09585 IPR029058 Alpha/Beta hydrolase fold CLM98_09590 IPR001241 DNA topoisomerase, type IIA CLM98_09590 IPR002288 DNA gyrase B subunit, C-terminal CLM98_09590 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_09590 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CLM98_09590 IPR006171 Toprim domain CLM98_09590 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLM98_09590 IPR013759 DNA topoisomerase, type IIA, central domain CLM98_09590 IPR013760 DNA topoisomerase, type IIA-like domain CLM98_09590 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_09590 IPR018522 DNA topoisomerase, type IIA, conserved site CLM98_09590 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_09590 IPR036890 CLM98_09590 CLM98_09600 IPR004468 CTP synthase CLM98_09600 IPR017456 CTP synthase, N-terminal CLM98_09600 IPR017926 Glutamine amidotransferase CLM98_09600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09600 IPR029062 Class I glutamine amidotransferase-like CLM98_09605 IPR006218 DAHP synthetase I/KDSA CLM98_09605 IPR006269 3-deoxy-8-phosphooctulonate synthase CLM98_09605 IPR013785 Aldolase-type TIM barrel CLM98_09615 IPR000941 Enolase CLM98_09615 IPR020809 Enolase, conserved site CLM98_09615 IPR020810 Enolase, C-terminal CLM98_09615 IPR020811 Enolase, N-terminal CLM98_09615 IPR029017 Enolase N-terminal domain-like CLM98_09615 IPR036849 CLM98_09615 CLM98_09620 IPR007060 Septum formation initiator FtsL/DivIC CLM98_09620 IPR023081 Cell division protein FtsB CLM98_09625 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLM98_09625 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CLM98_09625 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_09625 IPR034683 CLM98_09625 CLM98_09630 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CLM98_09630 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CLM98_09630 IPR036571 CLM98_09630 CLM98_09635 IPR001656 Pseudouridine synthase, TruD CLM98_09635 IPR020103 Pseudouridine synthase, catalytic domain CLM98_09635 IPR020119 Pseudouridine synthase TruD, conserved site CLM98_09640 IPR002625 Smr protein/MutS2 C-terminal CLM98_09640 IPR036063 CLM98_09640 CLM98_09645 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CLM98_09645 IPR030048 CLM98_09645 CLM98_09645 IPR036523 CLM98_09645 CLM98_09650 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CLM98_09650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_09655 IPR032816 CLM98_09655 CLM98_09660 IPR011055 Duplicated hybrid motif CLM98_09660 IPR016047 Peptidase M23 CLM98_09660 IPR018392 LysM domain CLM98_09660 IPR036779 CLM98_09660 CLM98_09665 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 CLM98_09665 IPR036748 CLM98_09665 CLM98_09670 IPR001890 RNA-binding, CRM domain CLM98_09670 IPR017924 RNA-binding protein YhbY CLM98_09670 IPR035920 CLM98_09670 CLM98_09675 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLM98_09675 IPR015507 Ribosomal RNA large subunit methyltransferase E CLM98_09675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_09680 IPR000642 Peptidase M41 CLM98_09680 IPR003593 AAA+ ATPase domain CLM98_09680 IPR003959 ATPase, AAA-type, core CLM98_09680 IPR003960 ATPase, AAA-type, conserved site CLM98_09680 IPR005936 Peptidase, FtsH CLM98_09680 IPR011546 Peptidase M41, FtsH extracellular CLM98_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09680 IPR037219 CLM98_09680 CLM98_09685 IPR000489 Pterin-binding CLM98_09685 IPR006390 Dihydropteroate synthase CLM98_09685 IPR011005 Dihydropteroate synthase-like CLM98_09690 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase CLM98_09690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09695 IPR005001 Host factor Hfq CLM98_09695 IPR010920 Like-Sm (LSM) domain CLM98_09700 IPR005225 Small GTP-binding protein domain CLM98_09700 IPR006073 GTP binding domain CLM98_09700 IPR016496 GTPase HflX CLM98_09700 IPR025121 GTPase HflX N-terminal domain CLM98_09700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09700 IPR032305 CLM98_09700 CLM98_09705 IPR008136 CinA, C-terminal CLM98_09705 IPR036653 CLM98_09705 CLM98_09710 IPR004147 UbiB domain CLM98_09710 IPR010232 Probable protein kinase UbiB CLM98_09710 IPR011009 Protein kinase-like domain CLM98_09715 IPR006197 Peptidase S24, LexA-like CLM98_09715 IPR006199 LexA repressor, DNA-binding domain CLM98_09715 IPR006200 LexA repressor CLM98_09715 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_09715 IPR036286 CLM98_09715 CLM98_09715 IPR036388 CLM98_09715 CLM98_09715 IPR036390 CLM98_09715 CLM98_09720 IPR003593 AAA+ ATPase domain CLM98_09720 IPR013765 DNA recombination and repair protein RecA CLM98_09720 IPR020584 DNA recombination/repair protein RecA, conserved site CLM98_09720 IPR023400 DNA recombination and repair protein RecA, C-terminal CLM98_09720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09730 IPR003783 Regulatory protein RecX CLM98_09730 IPR036388 CLM98_09730 CLM98_09735 IPR002318 Alanine-tRNA ligase, class IIc CLM98_09735 IPR003156 DHHA1 domain CLM98_09735 IPR009000 Translation protein, beta-barrel domain CLM98_09735 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLM98_09735 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain CLM98_09735 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CLM98_09735 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CLM98_09735 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CLM98_09740 IPR003751 Carbon storage regulator CLM98_09740 IPR036107 CLM98_09740 CLM98_09755 IPR000014 PAS domain CLM98_09755 IPR001610 PAC motif CLM98_09755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_09755 IPR004090 Chemotaxis methyl-accepting receptor CLM98_09755 IPR013655 PAS fold-3 CLM98_09755 IPR035965 CLM98_09755 CLM98_09760 IPR003829 Pirin, N-terminal domain CLM98_09760 IPR011051 RmlC-like cupin domain CLM98_09760 IPR012093 Pirin CLM98_09760 IPR014710 RmlC-like jelly roll fold CLM98_09765 IPR000847 Transcription regulator HTH, LysR CLM98_09765 IPR005119 LysR, substrate-binding CLM98_09765 IPR036388 CLM98_09765 CLM98_09765 IPR036390 CLM98_09765 CLM98_09770 IPR001763 Rhodanese-like domain CLM98_09770 IPR032816 CLM98_09770 CLM98_09770 IPR036873 CLM98_09770 CLM98_09785 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CLM98_09785 IPR022742 Putative lysophospholipase CLM98_09785 IPR029058 Alpha/Beta hydrolase fold CLM98_09790 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLM98_09790 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLM98_09790 IPR029056 Ribokinase-like CLM98_09795 IPR010699 Protein of unknown function DUF1275 CLM98_09805 IPR002716 PIN domain CLM98_09805 IPR003714 PhoH-like protein CLM98_09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09805 IPR029060 PIN domain-like CLM98_09810 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_09810 IPR036249 CLM98_09810 CLM98_09815 IPR009671 Regulator of ribonuclease activity B domain CLM98_09815 IPR036701 CLM98_09815 CLM98_09820 IPR016867 Glycine cleavage repressor GcvR CLM98_09825 IPR002220 DapA-like CLM98_09825 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLM98_09825 IPR013785 Aldolase-type TIM barrel CLM98_09825 IPR020624 Dihydrodipicolinate synthetase, conserved site CLM98_09825 IPR020625 Dihydrodipicolinate synthetase, active site CLM98_09835 IPR000813 7Fe ferredoxin CLM98_09835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_09835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_09835 IPR022569 Ferredoxin, C-terminal CLM98_09840 IPR007729 2-keto-3-deoxy-galactonokinase CLM98_09845 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_09845 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_09845 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_09850 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_09850 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_09850 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_09850 IPR023592 D-galactonate dehydratase CLM98_09850 IPR029017 Enolase N-terminal domain-like CLM98_09850 IPR029065 Enolase C-terminal domain-like CLM98_09850 IPR036849 CLM98_09850 CLM98_09855 IPR000887 KDPG/KHG aldolase CLM98_09855 IPR013785 Aldolase-type TIM barrel CLM98_09855 IPR031338 CLM98_09855 CLM98_09865 IPR000847 Transcription regulator HTH, LysR CLM98_09865 IPR005119 LysR, substrate-binding CLM98_09865 IPR036388 CLM98_09865 CLM98_09865 IPR036390 CLM98_09865 CLM98_09870 IPR000531 TonB-dependent receptor, beta-barrel CLM98_09870 IPR010104 Bacterial TonB-dependent receptor CLM98_09870 IPR012910 TonB-dependent receptor, plug CLM98_09870 IPR037066 CLM98_09870 CLM98_09875 IPR000531 TonB-dependent receptor, beta-barrel CLM98_09875 IPR010104 Bacterial TonB-dependent receptor CLM98_09875 IPR010916 TonB box, conserved site CLM98_09875 IPR012910 TonB-dependent receptor, plug CLM98_09875 IPR036942 CLM98_09875 CLM98_09875 IPR037066 CLM98_09875 CLM98_09880 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_09885 IPR005181 Domain of unknown function DUF303, acetylesterase putative CLM98_09885 IPR008979 Galactose-binding domain-like CLM98_09885 IPR025300 Beta-galactosidase jelly roll domain CLM98_09885 IPR036514 CLM98_09885 CLM98_09890 IPR013529 Glycoside hydrolase, family 42, N-terminal CLM98_09890 IPR017853 Glycoside hydrolase, superfamily CLM98_09895 IPR000322 Glycoside hydrolase, family 31 CLM98_09895 IPR011013 Galactose mutarotase-like domain CLM98_09895 IPR011658 PA14 CLM98_09895 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_09895 IPR017853 Glycoside hydrolase, superfamily CLM98_09895 IPR032513 CLM98_09895 CLM98_09895 IPR033403 CLM98_09895 CLM98_09900 IPR008928 Six-hairpin glycosidase-like CLM98_09900 IPR012341 Six-hairpin glycosidase CLM98_09900 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_09900 IPR016518 Alpha-L-fucosidase CLM98_09900 IPR027414 Glycosyl hydrolase family, N-terminal domain CLM98_09905 IPR000577 CLM98_09905 CLM98_09905 IPR006000 Xylulokinase CLM98_09905 IPR018483 Carbohydrate kinase, FGGY, conserved site CLM98_09905 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_09905 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_09910 IPR001998 Xylose isomerase CLM98_09910 IPR013452 Xylose isomerase, bacterial-type CLM98_09910 IPR036237 CLM98_09910 CLM98_09915 IPR003663 Sugar/inositol transporter CLM98_09915 IPR005828 General substrate transporter CLM98_09915 IPR005829 Sugar transporter, conserved site CLM98_09915 IPR036259 CLM98_09915 CLM98_09920 IPR007895 MASE1 CLM98_09935 IPR002508 Cell wall hydrolase/autolysin, catalytic CLM98_09935 IPR021731 AMIN domain CLM98_09940 IPR003801 GTP cyclohydrolase FolE2/MptA CLM98_09940 IPR022838 GTP cyclohydrolase FolE2 CLM98_09950 IPR002646 Poly A polymerase, head domain CLM98_09950 IPR010206 Poly(A) polymerase I CLM98_09950 IPR025866 Polymerase A arginine-rich C-terminal domain CLM98_09950 IPR032828 CLM98_09950 CLM98_09955 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLM98_09955 IPR035907 CLM98_09955 CLM98_09960 IPR003700 Ketopantoate hydroxymethyltransferase CLM98_09960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_09965 IPR003721 Pantoate-beta-alanine ligase CLM98_09965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_09970 IPR003190 Aspartate decarboxylase CLM98_09970 IPR009010 Aspartate decarboxylase-like domain CLM98_09975 IPR001672 Phosphoglucose isomerase (PGI) CLM98_09975 IPR018189 Phosphoglucose isomerase, conserved site CLM98_09975 IPR023096 Phosphoglucose isomerase, C-terminal CLM98_09980 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLM98_09980 IPR036165 CLM98_09980 CLM98_09985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_09995 IPR008557 Protein of unknown function DUF839 CLM98_10000 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_10000 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_10000 IPR017853 Glycoside hydrolase, superfamily CLM98_10000 IPR036881 CLM98_10000 CLM98_10000 IPR036962 CLM98_10000 CLM98_10010 IPR001734 Sodium/solute symporter CLM98_10010 IPR038377 CLM98_10010 CLM98_10015 IPR000160 GGDEF domain CLM98_10015 IPR001633 EAL domain CLM98_10015 IPR003018 GAF domain CLM98_10015 IPR029016 GAF domain-like CLM98_10015 IPR029787 Nucleotide cyclase CLM98_10015 IPR035919 CLM98_10015 CLM98_10025 IPR001547 Glycoside hydrolase, family 5 CLM98_10025 IPR017853 Glycoside hydrolase, superfamily CLM98_10025 IPR018087 Glycoside hydrolase, family 5, conserved site CLM98_10030 IPR001789 Signal transduction response regulator, receiver domain CLM98_10030 IPR002197 DNA binding HTH domain, Fis-type CLM98_10030 IPR009057 Homeodomain-like CLM98_10030 IPR011006 CheY-like superfamily CLM98_10035 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_10035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10035 IPR036097 CLM98_10035 CLM98_10035 IPR036890 CLM98_10035 CLM98_10045 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CLM98_10045 IPR011005 Dihydropteroate synthase-like CLM98_10045 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CLM98_10050 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_10050 IPR036938 CLM98_10050 CLM98_10060 IPR011701 Major facilitator superfamily CLM98_10060 IPR036259 CLM98_10060 CLM98_10065 IPR001920 Asp/Glu racemase CLM98_10065 IPR004380 Aspartate racemase CLM98_10065 IPR015942 Asp/Glu/hydantoin racemase CLM98_10065 IPR033134 CLM98_10065 CLM98_10075 IPR000620 Drug/metabolite transporter CLM98_10080 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CLM98_10080 IPR006094 FAD linked oxidase, N-terminal CLM98_10080 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CLM98_10080 IPR016167 FAD-binding, type 2, subdomain 1 CLM98_10080 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_10080 IPR036318 CLM98_10080 CLM98_10080 IPR036635 CLM98_10080 CLM98_10085 IPR001295 Dihydroorotate dehydrogenase, conserved site CLM98_10085 IPR005719 Dihydroorotate dehydrogenase, class 2 CLM98_10085 IPR005720 Dihydroorotate dehydrogenase domain CLM98_10085 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CLM98_10085 IPR013785 Aldolase-type TIM barrel CLM98_10090 IPR013216 Methyltransferase type 11 CLM98_10090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_10095 IPR025241 Domain of unknown function DUF4190 CLM98_10105 IPR015590 Aldehyde dehydrogenase domain CLM98_10105 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_10105 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_10105 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_10105 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_10115 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD CLM98_10120 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CLM98_10120 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_10125 IPR002509 Polysaccharide deacetylase CLM98_10125 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_10125 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CLM98_10125 IPR032772 CLM98_10125 CLM98_10130 IPR011990 Tetratricopeptide-like helical domain CLM98_10130 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA CLM98_10135 IPR005565 Haemolysin activator HlyB CLM98_10135 IPR013686 Polypeptide-transport-associated, ShlB-type CLM98_10135 IPR027282 Two partner secretion pathway transporter CLM98_10135 IPR035251 CLM98_10135 CLM98_10140 IPR008619 Filamentous haemagglutinin repeat CLM98_10140 IPR008638 Filamentous haemagglutinin, N-terminal CLM98_10140 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CLM98_10140 IPR011050 Pectin lyase fold/virulence factor CLM98_10140 IPR012334 Pectin lyase fold CLM98_10140 IPR025157 Haemagluttinin repeat CLM98_10150 IPR008619 Filamentous haemagglutinin repeat CLM98_10150 IPR025157 Haemagluttinin repeat CLM98_10160 IPR008619 Filamentous haemagglutinin repeat CLM98_10165 IPR004307 TspO/MBR-related protein CLM98_10165 IPR038330 CLM98_10165 CLM98_10170 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_10170 IPR001341 Aspartate kinase domain CLM98_10170 IPR001342 Homoserine dehydrogenase, catalytic CLM98_10170 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLM98_10170 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CLM98_10170 IPR018042 Aspartate kinase, conserved site CLM98_10170 IPR019811 Homoserine dehydrogenase, conserved site CLM98_10170 IPR027795 GATS-like ACT domain CLM98_10170 IPR036291 CLM98_10170 CLM98_10170 IPR036393 CLM98_10170 CLM98_10175 IPR000870 Homoserine kinase CLM98_10175 IPR006204 GHMP kinase N-terminal domain CLM98_10175 IPR013750 GHMP kinase, C-terminal domain CLM98_10175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_10175 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_10175 IPR036554 CLM98_10175 CLM98_10180 IPR009799 EthD domain CLM98_10180 IPR011008 Dimeric alpha-beta barrel CLM98_10185 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLM98_10185 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_10185 IPR004450 Threonine synthase-like CLM98_10185 IPR029144 Threonine synthase, N-terminal CLM98_10185 IPR036052 CLM98_10185 CLM98_10185 IPR037158 CLM98_10185 CLM98_10190 IPR032676 CLM98_10190 CLM98_10195 IPR000595 Cyclic nucleotide-binding domain CLM98_10195 IPR012318 Helix-turn-helix motif, Crp-type CLM98_10195 IPR014710 RmlC-like jelly roll fold CLM98_10195 IPR018490 Cyclic nucleotide-binding-like CLM98_10195 IPR036388 CLM98_10195 CLM98_10195 IPR036390 CLM98_10195 CLM98_10200 IPR004154 Anticodon-binding CLM98_10200 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLM98_10200 IPR015807 Histidine-tRNA ligase CLM98_10200 IPR036621 CLM98_10200 CLM98_10205 IPR000831 Trp repressor CLM98_10205 IPR010921 Trp repressor/replication initiator CLM98_10205 IPR013368 TrpR homologue YerC/YecD CLM98_10205 IPR038116 CLM98_10205 CLM98_10210 IPR013115 Histidine biosynthesis HisG, C-terminal CLM98_10210 IPR013820 ATP phosphoribosyltransferase, catalytic domain CLM98_10210 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_10210 IPR018198 ATP phosphoribosyltransferase, conserved site CLM98_10210 IPR020621 ATP phosphoribosyltransferase HisG, long form CLM98_10215 IPR001692 Histidinol dehydrogenase, conserved site CLM98_10215 IPR012131 Histidinol dehydrogenase CLM98_10215 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_10215 IPR022695 Histidinol dehydrogenase, monofunctional CLM98_10220 IPR004839 Aminotransferase, class I/classII CLM98_10220 IPR005861 Histidinol-phosphate aminotransferase family CLM98_10220 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_10220 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_10220 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10225 IPR000807 Imidazoleglycerol-phosphate dehydratase CLM98_10225 IPR005954 Histidinol-phosphatase CLM98_10225 IPR006543 Histidinol-phosphate phosphatase CLM98_10225 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CLM98_10225 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CLM98_10225 IPR020566 Histidine biosynthesis bifunctional protein HisB CLM98_10225 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_10225 IPR023214 HAD-like domain CLM98_10225 IPR036412 CLM98_10225 CLM98_10225 IPR038494 CLM98_10225 CLM98_10230 IPR010139 Imidazole glycerol phosphate synthase, subunit H CLM98_10230 IPR017926 Glutamine amidotransferase CLM98_10230 IPR029062 Class I glutamine amidotransferase-like CLM98_10235 IPR006062 Histidine biosynthesis CLM98_10235 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CLM98_10235 IPR011060 Ribulose-phosphate binding barrel CLM98_10235 IPR013785 Aldolase-type TIM barrel CLM98_10235 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CLM98_10240 IPR004651 Histidine biosynthesis, HisF CLM98_10240 IPR006062 Histidine biosynthesis CLM98_10240 IPR011060 Ribulose-phosphate binding barrel CLM98_10240 IPR013785 Aldolase-type TIM barrel CLM98_10245 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CLM98_10245 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CLM98_10245 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CLM98_10245 IPR023019 Histidine biosynthesis bifunctional protein HisIE CLM98_10245 IPR038019 CLM98_10245 CLM98_10250 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLM98_10250 IPR029052 Metallo-dependent phosphatase-like CLM98_10250 IPR032285 CLM98_10250 CLM98_10250 IPR032288 CLM98_10250 CLM98_10255 IPR001096 Peptidase C13, legumain CLM98_10255 IPR029030 Caspase-like domain CLM98_10260 IPR006439 HAD hydrolase, subfamily IA CLM98_10260 IPR023214 HAD-like domain CLM98_10260 IPR023943 Enolase-phosphatase E1 CLM98_10260 IPR036412 CLM98_10260 CLM98_10265 IPR004313 Acireductone dioxygenase ARD family CLM98_10265 IPR011051 RmlC-like cupin domain CLM98_10265 IPR014710 RmlC-like jelly roll fold CLM98_10265 IPR023956 Acireductone dioxygenase ARD CLM98_10270 IPR001303 Class II aldolase/adducin N-terminal CLM98_10270 IPR017714 Methylthioribulose-1-phosphate dehydratase CLM98_10270 IPR036409 CLM98_10270 CLM98_10275 IPR002293 Amino acid/polyamine transporter I CLM98_10280 IPR002293 Amino acid/polyamine transporter I CLM98_10285 IPR000086 NUDIX hydrolase domain CLM98_10285 IPR015797 NUDIX hydrolase domain-like CLM98_10290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_10290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_10290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_10290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLM98_10290 IPR036291 CLM98_10290 CLM98_10295 IPR004113 FAD-linked oxidase, C-terminal CLM98_10295 IPR006094 FAD linked oxidase, N-terminal CLM98_10295 IPR016164 FAD-linked oxidase-like, C-terminal CLM98_10295 IPR016167 FAD-binding, type 2, subdomain 1 CLM98_10295 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_10295 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLM98_10295 IPR036318 CLM98_10295 CLM98_10300 IPR012661 Conserved hypothetical protein CHP02448 CLM98_10305 IPR025178 Domain of unknown function DUF4105 CLM98_10315 IPR001059 Translation elongation factor P/YeiP, central CLM98_10315 IPR008991 Translation protein SH3-like domain CLM98_10315 IPR011897 Translation elongation factor P-like, YeiP CLM98_10315 IPR012340 Nucleic acid-binding, OB-fold CLM98_10315 IPR013185 Translation elongation factor, KOW-like CLM98_10315 IPR013852 Translation elongation factor P/YeiP, conserved site CLM98_10315 IPR014722 Ribosomal protein L2 domain 2 CLM98_10315 IPR015365 Elongation factor P, C-terminal CLM98_10315 IPR020599 Translation elongation factor P/YeiP CLM98_10320 IPR002347 Glucose/ribitol dehydrogenase CLM98_10320 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_10320 IPR036291 CLM98_10320 CLM98_10325 IPR000891 Pyruvate carboxyltransferase CLM98_10325 IPR013785 Aldolase-type TIM barrel CLM98_10330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_10330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_10335 IPR001753 Crotonase superfamily CLM98_10335 IPR014748 Crontonase, C-terminal CLM98_10335 IPR029045 ClpP/crotonase-like domain CLM98_10340 IPR007167 Ferrous iron transporter FeoA domain CLM98_10340 IPR008988 Transcriptional repressor, C-terminal CLM98_10340 IPR038157 CLM98_10340 CLM98_10345 IPR006073 GTP binding domain CLM98_10345 IPR011640 Ferrous iron transport protein B, C-terminal CLM98_10345 IPR011642 Nucleoside recognition Gate CLM98_10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10345 IPR030389 CLM98_10345 CLM98_10360 IPR004839 Aminotransferase, class I/classII CLM98_10360 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_10360 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_10360 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10365 IPR005163 3-alpha domain CLM98_10365 IPR005302 Molybdenum cofactor sulfurase, C-terminal CLM98_10365 IPR011037 Pyruvate kinase-like, insert domain CLM98_10370 IPR000846 Dihydrodipicolinate reductase, N-terminal CLM98_10370 IPR022663 Dihydrodipicolinate reductase, C-terminal CLM98_10370 IPR022664 Dihydrodipicolinate reductase, conserved site CLM98_10370 IPR023940 Dihydrodipicolinate reductase, bacterial CLM98_10370 IPR036291 CLM98_10370 CLM98_10375 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain CLM98_10375 IPR006274 Carbamoyl-phosphate synthase, small subunit CLM98_10375 IPR017926 Glutamine amidotransferase CLM98_10375 IPR029062 Class I glutamine amidotransferase-like CLM98_10375 IPR036480 CLM98_10375 CLM98_10385 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLM98_10385 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CLM98_10385 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CLM98_10385 IPR006275 Carbamoyl-phosphate synthase, large subunit CLM98_10385 IPR011607 Methylglyoxal synthase-like domain CLM98_10385 IPR016185 Pre-ATP-grasp domain CLM98_10385 IPR036897 CLM98_10385 CLM98_10385 IPR036914 CLM98_10385 CLM98_10390 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_10390 IPR006359 Transcription elongation factor GreA CLM98_10390 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLM98_10390 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLM98_10390 IPR023459 Transcription elongation factor GreA/GreB family CLM98_10390 IPR028624 Transcription elongation factor GreA/GreB CLM98_10390 IPR036805 CLM98_10390 CLM98_10390 IPR036953 CLM98_10390 CLM98_10395 IPR016631 Regulatory, RpfE CLM98_10400 IPR001667 DDH domain CLM98_10400 IPR003156 DHHA1 domain CLM98_10400 IPR004610 Bacterial RecJ exonuclease CLM98_10400 IPR038763 CLM98_10400 CLM98_10405 IPR013783 Immunoglobulin-like fold CLM98_10405 IPR031325 CLM98_10405 CLM98_10405 IPR036116 CLM98_10405 CLM98_10410 IPR013783 Immunoglobulin-like fold CLM98_10410 IPR036116 CLM98_10410 CLM98_10415 IPR022385 Rhs repeat-associated core CLM98_10415 IPR028903 Tox-REase-7 domain CLM98_10420 IPR011989 Armadillo-like helical CLM98_10420 IPR016024 Armadillo-type fold CLM98_10435 IPR002656 Acyltransferase 3 CLM98_10440 IPR007492 LytTR DNA-binding domain CLM98_10440 IPR012379 LytTR MHYE transcriptional regulator, putative CLM98_10445 IPR000352 Peptide chain release factor class I/class II CLM98_10445 IPR004374 Peptide chain release factor 2 CLM98_10445 IPR005139 Peptide chain release factor CLM98_10450 IPR002313 Lysine-tRNA ligase, class II CLM98_10450 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_10450 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_10450 IPR012340 Nucleic acid-binding, OB-fold CLM98_10450 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLM98_10455 IPR001789 Signal transduction response regulator, receiver domain CLM98_10455 IPR003607 HD/PDEase domain CLM98_10455 IPR006674 HD domain CLM98_10455 IPR011006 CheY-like superfamily CLM98_10460 IPR001789 Signal transduction response regulator, receiver domain CLM98_10460 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_10460 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_10460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10460 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10460 IPR011006 CheY-like superfamily CLM98_10460 IPR036097 CLM98_10460 CLM98_10460 IPR036641 CLM98_10460 CLM98_10460 IPR036890 CLM98_10460 CLM98_10465 IPR001753 Crotonase superfamily CLM98_10465 IPR029045 ClpP/crotonase-like domain CLM98_10470 IPR000873 AMP-dependent synthetase/ligase CLM98_10470 IPR020845 AMP-binding, conserved site CLM98_10470 IPR025110 AMP-binding enzyme C-terminal domain CLM98_10475 IPR032710 CLM98_10475 CLM98_10480 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CLM98_10480 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CLM98_10480 IPR006249 Aconitate/iron regulatory protein 2 CLM98_10480 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_10480 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_10480 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_10480 IPR036008 CLM98_10480 CLM98_10485 IPR007159 AbrB-like domain CLM98_10485 IPR037914 CLM98_10485 CLM98_10490 IPR002716 PIN domain CLM98_10490 IPR029060 PIN domain-like CLM98_10495 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CLM98_10495 IPR004406 Aconitase B, bacterial CLM98_10495 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_10495 IPR015929 Aconitase B, N-terminal, bacterial CLM98_10495 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_10495 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CLM98_10495 IPR015933 Aconitase B, HEAT-like, bacterial CLM98_10495 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_10495 IPR036008 CLM98_10495 CLM98_10495 IPR036288 CLM98_10495 CLM98_10500 IPR000073 Alpha/beta hydrolase fold-1 CLM98_10500 IPR000639 Epoxide hydrolase-like CLM98_10500 IPR029058 Alpha/Beta hydrolase fold CLM98_10505 IPR000014 PAS domain CLM98_10505 IPR000160 GGDEF domain CLM98_10505 IPR001610 PAC motif CLM98_10505 IPR001633 EAL domain CLM98_10505 IPR003018 GAF domain CLM98_10505 IPR012226 Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase CLM98_10505 IPR029016 GAF domain-like CLM98_10505 IPR029787 Nucleotide cyclase CLM98_10505 IPR035919 CLM98_10505 CLM98_10505 IPR035965 CLM98_10505 CLM98_10510 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_10510 IPR001789 Signal transduction response regulator, receiver domain CLM98_10510 IPR008248 Signal transduction response regulator, chemotaxis, CheB CLM98_10510 IPR011006 CheY-like superfamily CLM98_10510 IPR035909 CLM98_10510 CLM98_10515 IPR005659 Chemoreceptor glutamine deamidase CheD CLM98_10515 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLM98_10515 IPR038592 CLM98_10515 CLM98_10520 IPR000780 MCP methyltransferase, CheR-type CLM98_10520 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CLM98_10520 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_10520 IPR026024 Chemotaxis protein methyltransferase CheR CLM98_10520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_10520 IPR036804 CLM98_10520 CLM98_10525 IPR003660 HAMP linker domain CLM98_10525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10525 IPR024478 4HB MCP domain CLM98_10525 IPR035965 CLM98_10525 CLM98_10535 IPR002545 CheW-like protein CLM98_10535 IPR036061 CLM98_10535 CLM98_10540 IPR009875 PilZ domain CLM98_10540 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLM98_10540 IPR012349 FMN-binding split barrel CLM98_10540 IPR023787 Type III secretion system flagellar brake protein YcgR CLM98_10550 IPR003660 HAMP linker domain CLM98_10550 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10550 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10550 IPR029151 Periplasmic sensor domain-like CLM98_10550 IPR033462 CLM98_10550 CLM98_10555 IPR003660 HAMP linker domain CLM98_10555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10555 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10555 IPR024478 4HB MCP domain CLM98_10560 IPR003660 HAMP linker domain CLM98_10560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10560 IPR024478 4HB MCP domain CLM98_10565 IPR003660 HAMP linker domain CLM98_10565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10570 IPR003660 HAMP linker domain CLM98_10570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10570 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10570 IPR024478 4HB MCP domain CLM98_10580 IPR003660 HAMP linker domain CLM98_10580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10580 IPR007891 CHASE3 CLM98_10585 IPR003660 HAMP linker domain CLM98_10585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10585 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10585 IPR024478 4HB MCP domain CLM98_10590 IPR003660 HAMP linker domain CLM98_10590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10590 IPR024478 4HB MCP domain CLM98_10595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10595 IPR035965 CLM98_10595 CLM98_10600 IPR025737 MetA-pathway of phenol degradation, putative CLM98_10610 IPR003660 HAMP linker domain CLM98_10610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10610 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10610 IPR033479 CLM98_10610 CLM98_10615 IPR003660 HAMP linker domain CLM98_10615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10615 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10615 IPR033480 CLM98_10615 CLM98_10625 IPR003660 HAMP linker domain CLM98_10625 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_10625 IPR004090 Chemotaxis methyl-accepting receptor CLM98_10625 IPR024478 4HB MCP domain CLM98_10630 IPR002545 CheW-like protein CLM98_10630 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_10630 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_10630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10630 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10630 IPR036061 CLM98_10630 CLM98_10630 IPR036097 CLM98_10630 CLM98_10630 IPR036641 CLM98_10630 CLM98_10630 IPR036890 CLM98_10630 CLM98_10630 IPR037006 CLM98_10630 CLM98_10635 IPR001789 Signal transduction response regulator, receiver domain CLM98_10635 IPR011006 CheY-like superfamily CLM98_10640 IPR002645 STAS domain CLM98_10640 IPR036513 CLM98_10640 CLM98_10645 IPR002545 CheW-like protein CLM98_10645 IPR036061 CLM98_10645 CLM98_10650 IPR025669 AAA domain CLM98_10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10655 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_10655 IPR025713 Motility protein B, N-terminal domain CLM98_10655 IPR036737 CLM98_10655 CLM98_10660 IPR002898 MotA/TolQ/ExbB proton channel CLM98_10670 IPR000531 TonB-dependent receptor, beta-barrel CLM98_10670 IPR010104 Bacterial TonB-dependent receptor CLM98_10670 IPR012910 TonB-dependent receptor, plug CLM98_10670 IPR037066 CLM98_10670 CLM98_10680 IPR000719 Protein kinase domain CLM98_10680 IPR008271 Serine/threonine-protein kinase, active site CLM98_10680 IPR011009 Protein kinase-like domain CLM98_10700 IPR014944 Toxin SymE-like CLM98_10715 IPR002559 Transposase, IS4-like CLM98_10715 IPR012337 Ribonuclease H-like domain CLM98_10730 IPR001343 Haemolysin-type calcium-binding repeat CLM98_10730 IPR011049 Serralysin-like metalloprotease, C-terminal CLM98_10730 IPR018511 Hemolysin-type calcium-binding conserved site CLM98_10730 IPR023346 Lysozyme-like domain CLM98_10735 IPR025332 Protein of unknown function DUF4238 CLM98_10765 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_10765 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_10775 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLM98_10775 IPR007197 Radical SAM CLM98_10775 IPR013785 Aldolase-type TIM barrel CLM98_10775 IPR023885 4Fe4S-binding SPASM domain CLM98_10785 IPR002559 Transposase, IS4-like CLM98_10785 IPR012337 Ribonuclease H-like domain CLM98_10795 IPR002545 CheW-like protein CLM98_10795 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_10795 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_10795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_10795 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_10795 IPR036061 CLM98_10795 CLM98_10795 IPR036097 CLM98_10795 CLM98_10795 IPR036641 CLM98_10795 CLM98_10795 IPR036890 CLM98_10795 CLM98_10795 IPR037006 CLM98_10795 CLM98_10800 IPR007439 Chemotaxis phosphatase, CheZ CLM98_10805 IPR001789 Signal transduction response regulator, receiver domain CLM98_10805 IPR011006 CheY-like superfamily CLM98_10810 IPR000943 RNA polymerase sigma-70 CLM98_10810 IPR007624 RNA polymerase sigma-70 region 3 CLM98_10810 IPR007627 RNA polymerase sigma-70 region 2 CLM98_10810 IPR007630 RNA polymerase sigma-70 region 4 CLM98_10810 IPR012845 RNA polymerase sigma factor, FliA/WhiG CLM98_10810 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_10810 IPR013325 RNA polymerase sigma factor, region 2 CLM98_10810 IPR014284 RNA polymerase sigma-70 like domain CLM98_10810 IPR028617 RNA polymerase sigma factor FliA CLM98_10815 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_10815 IPR025501 ATP binding protein MinD CLM98_10815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10820 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_10820 IPR003593 AAA+ ATPase domain CLM98_10820 IPR020006 Signal-recognition particle (SRP)-type GTPase CLM98_10820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10825 IPR001712 Type III secretion system FHIPEP CLM98_10825 IPR006301 Flagellar biosynthesis protein FlhA CLM98_10830 IPR006135 Type III secretion system substrate exporter CLM98_10830 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB CLM98_10830 IPR029025 Type III secretion system substrate exporter, C-terminal CLM98_10835 IPR000160 GGDEF domain CLM98_10835 IPR001633 EAL domain CLM98_10835 IPR005330 MHYT CLM98_10835 IPR029787 Nucleotide cyclase CLM98_10835 IPR035919 CLM98_10835 CLM98_10840 IPR000160 GGDEF domain CLM98_10840 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_10840 IPR011123 Two component regulator three Y CLM98_10840 IPR013783 Immunoglobulin-like fold CLM98_10840 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_10840 IPR029787 Nucleotide cyclase CLM98_10850 IPR000160 GGDEF domain CLM98_10850 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_10850 IPR011110 Two component regulator propeller CLM98_10850 IPR011123 Two component regulator three Y CLM98_10850 IPR013783 Immunoglobulin-like fold CLM98_10850 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_10850 IPR029787 Nucleotide cyclase CLM98_10855 IPR002010 Type III secretion system inner membrane R protein CLM98_10855 IPR006303 Flagellar biosynthesis protein FliR CLM98_10860 IPR002191 Bacterial export protein family 3 CLM98_10865 IPR005837 Flagellar transport protein FliP CLM98_10865 IPR005838 Type III secretion system inner membrane P protein CLM98_10870 IPR022781 Flagellar biosynthesis protein, FliO CLM98_10875 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CLM98_10875 IPR001543 Surface presentation of antigen (SpoA) CLM98_10875 IPR012826 Flagellar motor switch FliN CLM98_10875 IPR036429 CLM98_10875 CLM98_10880 IPR001543 Surface presentation of antigen (SpoA) CLM98_10880 IPR001689 Flagellar motor switch protein FliM CLM98_10880 IPR028976 CheC-like domain CLM98_10880 IPR036429 CLM98_10880 CLM98_10885 IPR005503 Flagellar basal body-associated protein FliL CLM98_10890 IPR001635 Flagellar hook-length control protein FliK CLM98_10890 IPR021136 Flagellar hook-length control protein-like, C-terminal CLM98_10890 IPR038610 CLM98_10890 CLM98_10895 IPR012823 Flagellar export FliJ CLM98_10900 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_10900 IPR003593 AAA+ ATPase domain CLM98_10900 IPR005714 ATPase, type III secretion system, FliI/YscN CLM98_10900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10905 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLM98_10910 IPR000090 Flagellar motor switch protein FliG CLM98_10910 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLM98_10910 IPR023087 CLM98_10910 CLM98_10910 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLM98_10910 IPR032779 CLM98_10910 CLM98_10915 IPR000067 Flagellar M-ring protein FliF CLM98_10915 IPR006182 Secretory protein YscJ/FliF CLM98_10915 IPR013556 Flagellar M-ring C-terminal CLM98_10920 IPR001624 Flagellar hook-basal body complex protein FliE CLM98_10925 IPR001173 Glycosyltransferase 2-like CLM98_10925 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_10930 IPR006342 Methyltransferase FkbM CLM98_10930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_10935 IPR001451 Bacterial transferase hexapeptide repeat CLM98_10935 IPR011004 Trimeric LpxA-like CLM98_10940 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLM98_10940 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLM98_10940 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_10940 IPR036922 CLM98_10940 CLM98_10945 IPR001451 Bacterial transferase hexapeptide repeat CLM98_10945 IPR011004 Trimeric LpxA-like CLM98_10945 IPR020019 Sialic acid O-acyltransferase, NeuD CLM98_10950 IPR002347 Glucose/ribitol dehydrogenase CLM98_10950 IPR036291 CLM98_10950 CLM98_10955 IPR002347 Glucose/ribitol dehydrogenase CLM98_10955 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_10955 IPR036291 CLM98_10955 CLM98_10960 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLM98_10960 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_10960 IPR016039 Thiolase-like CLM98_10965 IPR036736 CLM98_10965 CLM98_10970 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLM98_10970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_10970 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_10975 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_10975 IPR002197 DNA binding HTH domain, Fis-type CLM98_10975 IPR003593 AAA+ ATPase domain CLM98_10975 IPR009057 Homeodomain-like CLM98_10975 IPR010518 Flagellar regulatory FleQ CLM98_10975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_10975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_10975 IPR025944 Sigma-54 interaction domain, conserved site CLM98_10975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_10980 IPR001789 Signal transduction response regulator, receiver domain CLM98_10980 IPR011006 CheY-like superfamily CLM98_10985 IPR000394 RNA polymerase sigma factor 54 CLM98_10985 IPR007046 RNA polymerase sigma factor 54, core-binding CLM98_10985 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLM98_10985 IPR038709 CLM98_10985 CLM98_10990 IPR000792 Transcription regulator LuxR, C-terminal CLM98_10990 IPR001789 Signal transduction response regulator, receiver domain CLM98_10990 IPR011006 CheY-like superfamily CLM98_10990 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_10995 IPR031800 CLM98_10995 CLM98_11005 IPR003713 Flagellar protein FliS CLM98_11005 IPR036584 CLM98_11005 CLM98_11010 IPR003481 Flagellar hook-associated protein 2, N-terminal CLM98_11010 IPR010809 Flagellar hook-associated 2, C-terminal CLM98_11010 IPR010810 Flagellin hook, IN motif CLM98_11015 IPR001029 Flagellin, D0/D1 domain CLM98_11015 IPR001492 Flagellin CLM98_11015 IPR010810 Flagellin hook, IN motif CLM98_11020 IPR001029 Flagellin, D0/D1 domain CLM98_11020 IPR013384 Flagellar hook-associated protein 3 CLM98_11025 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11025 IPR002371 Flagellar hook-associated protein, FlgK CLM98_11025 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11030 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLM98_11030 IPR013377 Flagellar rod assembly protein/muramidase FlgJ CLM98_11030 IPR019301 Flagellar protein FlgJ, N-terminal CLM98_11035 IPR001782 Flagellar P-ring protein CLM98_11040 IPR000527 Flagellar L-ring protein CLM98_11045 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11045 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11045 IPR012834 Flagellar basal-body rod FlgG CLM98_11045 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11045 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLM98_11045 IPR037925 CLM98_11045 CLM98_11050 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11050 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11050 IPR012836 Flagellar basal-body rod FlgF CLM98_11050 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLM98_11050 IPR037925 CLM98_11050 CLM98_11055 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11055 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11055 IPR011491 Flagellar basal body FlaE CLM98_11055 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11055 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLM98_11055 IPR037058 CLM98_11055 CLM98_11055 IPR037925 CLM98_11055 CLM98_11060 IPR005648 Flagellar hook capping protein CLM98_11060 IPR025963 FlgD Tudor-like domain CLM98_11060 IPR025965 FlgD Ig-like domain CLM98_11065 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11065 IPR006299 Flagellar basal-body rod protein FlgC CLM98_11065 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLM98_11065 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11070 IPR001444 Flagellar basal body rod protein, N-terminal CLM98_11070 IPR006300 Flagellar basal-body rod protein FlgB CLM98_11070 IPR019776 Flagellar basal body rod protein, conserved site CLM98_11075 IPR001789 Signal transduction response regulator, receiver domain CLM98_11075 IPR002545 CheW-like protein CLM98_11075 IPR011006 CheY-like superfamily CLM98_11075 IPR024181 Chemotaxis response regulator CheV CLM98_11075 IPR036061 CLM98_11075 CLM98_11080 IPR013974 SAF domain CLM98_11080 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CLM98_11085 IPR007412 Anti-sigma-28 factor, FlgM CLM98_11085 IPR031316 CLM98_11085 CLM98_11085 IPR035890 CLM98_11085 CLM98_11090 IPR036679 CLM98_11090 CLM98_11095 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_11095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_11095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11095 IPR036097 CLM98_11095 CLM98_11095 IPR036890 CLM98_11095 CLM98_11100 IPR000160 GGDEF domain CLM98_11100 IPR001633 EAL domain CLM98_11100 IPR001789 Signal transduction response regulator, receiver domain CLM98_11100 IPR011006 CheY-like superfamily CLM98_11100 IPR029787 Nucleotide cyclase CLM98_11100 IPR035919 CLM98_11100 CLM98_11105 IPR000014 PAS domain CLM98_11105 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_11105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11105 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_11105 IPR013656 PAS fold-4 CLM98_11105 IPR035965 CLM98_11105 CLM98_11105 IPR036890 CLM98_11105 CLM98_11110 IPR000014 PAS domain CLM98_11110 IPR000160 GGDEF domain CLM98_11110 IPR001610 PAC motif CLM98_11110 IPR001633 EAL domain CLM98_11110 IPR013655 PAS fold-3 CLM98_11110 IPR029787 Nucleotide cyclase CLM98_11110 IPR035919 CLM98_11110 CLM98_11110 IPR035965 CLM98_11110 CLM98_11120 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_11125 IPR007451 Uncharacterised protein family UPF0274 CLM98_11125 IPR035932 CLM98_11125 CLM98_11130 IPR004506 tRNA-specific 2-thiouridylase CLM98_11130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_11130 IPR023382 Adenine nucleotide alpha hydrolase-like domains CLM98_11135 IPR000086 NUDIX hydrolase domain CLM98_11135 IPR015797 NUDIX hydrolase domain-like CLM98_11135 IPR020084 NUDIX hydrolase, conserved site CLM98_11140 IPR003769 Adaptor protein ClpS, core CLM98_11140 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLM98_11140 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CLM98_11145 IPR001270 ClpA/B family CLM98_11145 IPR003593 AAA+ ATPase domain CLM98_11145 IPR003959 ATPase, AAA-type, core CLM98_11145 IPR004176 Clp, N-terminal CLM98_11145 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CLM98_11145 IPR018368 ClpA/B, conserved site 1 CLM98_11145 IPR019489 Clp ATPase, C-terminal CLM98_11145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11145 IPR028299 ClpA/B, conserved site 2 CLM98_11145 IPR036628 CLM98_11145 CLM98_11150 IPR004368 Translation initiation factor IF-1 CLM98_11150 IPR006196 RNA-binding domain, S1, IF1 type CLM98_11150 IPR012340 Nucleic acid-binding, OB-fold CLM98_11150 IPR022967 RNA-binding domain, S1 CLM98_11155 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CLM98_11155 IPR016181 Acyl-CoA N-acyltransferase CLM98_11160 IPR007434 Protein of unknown function DUF482 CLM98_11160 IPR016181 Acyl-CoA N-acyltransferase CLM98_11165 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLM98_11165 IPR005982 Thioredoxin reductase CLM98_11165 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLM98_11165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_11165 IPR036188 CLM98_11165 CLM98_11170 IPR002543 FtsK domain CLM98_11170 IPR003593 AAA+ ATPase domain CLM98_11170 IPR018541 FtsK gamma domain CLM98_11170 IPR025199 Domain of unknown function DUF4117 CLM98_11170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11170 IPR036388 CLM98_11170 CLM98_11170 IPR036390 CLM98_11170 CLM98_11175 IPR002931 Transglutaminase-like CLM98_11175 IPR024618 Domain of unknown function DUF3857 CLM98_11175 IPR038765 CLM98_11175 CLM98_11180 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CLM98_11180 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CLM98_11180 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLM98_11190 IPR003593 AAA+ ATPase domain CLM98_11190 IPR003959 ATPase, AAA-type, core CLM98_11190 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLM98_11190 IPR021886 MgsA AAA+ ATPase C-terminal CLM98_11190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11190 IPR032423 CLM98_11190 CLM98_11195 IPR003691 Putative fluoride ion transporter CrcB CLM98_11205 IPR002155 Thiolase CLM98_11205 IPR016039 Thiolase-like CLM98_11205 IPR020610 Thiolase, active site CLM98_11205 IPR020613 Thiolase, conserved site CLM98_11205 IPR020615 Thiolase, acyl-enzyme intermediate active site CLM98_11205 IPR020616 Thiolase, N-terminal CLM98_11205 IPR020617 Thiolase, C-terminal CLM98_11210 IPR001753 Crotonase superfamily CLM98_11210 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLM98_11210 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLM98_11210 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_11210 IPR013328 Dehydrogenase, multihelical CLM98_11210 IPR029045 ClpP/crotonase-like domain CLM98_11210 IPR036291 CLM98_11210 CLM98_11215 IPR001647 DNA-binding HTH domain, TetR-type CLM98_11215 IPR009057 Homeodomain-like CLM98_11215 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_11215 IPR036271 CLM98_11215 CLM98_11220 IPR001564 Nucleoside diphosphate kinase CLM98_11220 IPR023005 Nucleoside diphosphate kinase, active site CLM98_11220 IPR034907 CLM98_11220 CLM98_11220 IPR036850 CLM98_11220 CLM98_11225 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CLM98_11225 IPR007197 Radical SAM CLM98_11225 IPR013785 Aldolase-type TIM barrel CLM98_11225 IPR027492 Dual-specificity RNA methyltransferase RlmN CLM98_11230 IPR011990 Tetratricopeptide-like helical domain CLM98_11230 IPR013360 Pilus biogenesis/stability type IV, PilW CLM98_11230 IPR019734 Tetratricopeptide repeat CLM98_11235 IPR025194 Domain of unknown function DUF4115 CLM98_11240 IPR011990 Tetratricopeptide-like helical domain CLM98_11240 IPR018704 Domain of unknown function DUF09976 CLM98_11245 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_11245 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_11245 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_11245 IPR017687 Outer membrane protein assembly factor BamB CLM98_11245 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_11250 IPR003593 AAA+ ATPase domain CLM98_11250 IPR005225 Small GTP-binding protein domain CLM98_11250 IPR006073 GTP binding domain CLM98_11250 IPR015946 K homology domain-like, alpha/beta CLM98_11250 IPR016484 GTP-binding protein EngA CLM98_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11250 IPR032859 CLM98_11250 CLM98_11255 IPR001453 Molybdopterin binding domain CLM98_11255 IPR005110 MoeA, N-terminal and linker domain CLM98_11255 IPR005111 MoeA, C-terminal, domain IV CLM98_11255 IPR036135 CLM98_11255 CLM98_11255 IPR036425 CLM98_11255 CLM98_11255 IPR036688 CLM98_11255 CLM98_11260 IPR000594 UBA/THIF-type NAD/FAD binding fold CLM98_11260 IPR001763 Rhodanese-like domain CLM98_11260 IPR035985 CLM98_11260 CLM98_11260 IPR036873 CLM98_11260 CLM98_11270 IPR000531 TonB-dependent receptor, beta-barrel CLM98_11270 IPR010104 Bacterial TonB-dependent receptor CLM98_11270 IPR012910 TonB-dependent receptor, plug CLM98_11270 IPR037066 CLM98_11270 CLM98_11280 IPR012347 Ferritin-related CLM98_11280 IPR025419 Domain of unknown function DUF4142 CLM98_11285 IPR023393 START-like domain CLM98_11290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_11290 IPR011032 GroES (chaperonin 10)-like CLM98_11290 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_11290 IPR013154 Alcohol dehydrogenase GroES-like CLM98_11290 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain CLM98_11290 IPR036291 CLM98_11290 CLM98_11295 IPR010686 Protein of unknown function DUF1264 CLM98_11300 IPR004808 AP endonuclease 1 CLM98_11300 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_11300 IPR020847 AP endonuclease 1, binding site CLM98_11300 IPR036691 CLM98_11300 CLM98_11305 IPR006603 PQ-loop repeat CLM98_11310 IPR001453 Molybdopterin binding domain CLM98_11310 IPR005110 MoeA, N-terminal and linker domain CLM98_11310 IPR005111 MoeA, C-terminal, domain IV CLM98_11310 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLM98_11310 IPR036135 CLM98_11310 CLM98_11310 IPR036425 CLM98_11310 CLM98_11310 IPR036688 CLM98_11310 CLM98_11315 IPR013482 Molybdenum cofactor guanylyltransferase CLM98_11315 IPR025877 MobA-like NTP transferase domain CLM98_11315 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_11325 IPR000073 Alpha/beta hydrolase fold-1 CLM98_11325 IPR029058 Alpha/Beta hydrolase fold CLM98_11330 IPR001046 NRAMP family CLM98_11335 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain CLM98_11335 IPR022687 Iron dependent repressor, N-terminal CLM98_11335 IPR022689 Iron dependent repressor, diptheria toxin type CLM98_11335 IPR036388 CLM98_11335 CLM98_11335 IPR036390 CLM98_11335 CLM98_11335 IPR036421 CLM98_11335 CLM98_11340 IPR002125 CMP/dCMP deaminase, zinc-binding CLM98_11340 IPR016192 APOBEC/CMP deaminase, zinc-binding CLM98_11340 IPR016193 Cytidine deaminase-like CLM98_11340 IPR028883 tRNA-specific adenosine deaminase CLM98_11345 IPR012337 Ribonuclease H-like domain CLM98_11345 IPR013520 Exonuclease, RNase T/DNA polymerase III CLM98_11345 IPR022894 Oligoribonuclease CLM98_11345 IPR036397 CLM98_11345 CLM98_11350 IPR006685 Mechanosensitive ion channel MscS CLM98_11350 IPR006686 Mechanosensitive ion channel MscS, conserved site CLM98_11350 IPR010920 Like-Sm (LSM) domain CLM98_11350 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLM98_11350 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLM98_11350 IPR023408 CLM98_11350 CLM98_11355 IPR000121 PEP-utilising enzyme, C-terminal CLM98_11355 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CLM98_11355 IPR006319 Phosphoenolpyruvate synthase CLM98_11355 IPR008279 PEP-utilising enzyme, mobile domain CLM98_11355 IPR013815 ATP-grasp fold, subdomain 1 CLM98_11355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_11355 IPR018274 PEP-utilising enzyme, active site CLM98_11355 IPR023151 PEP-utilising enzyme, conserved site CLM98_11355 IPR036637 CLM98_11355 CLM98_11360 IPR005177 Bifunctional kinase-pyrophosphorylase CLM98_11360 IPR026530 Phosphoenolpyruvate synthase regulatory protein CLM98_11365 IPR009659 Protein of unknown function DUF1249 CLM98_11370 IPR000086 NUDIX hydrolase domain CLM98_11370 IPR003562 Mutator MutX protein CLM98_11370 IPR015797 NUDIX hydrolase domain-like CLM98_11370 IPR020084 NUDIX hydrolase, conserved site CLM98_11375 IPR002347 Glucose/ribitol dehydrogenase CLM98_11375 IPR011294 3-hydroxybutyrate dehydrogenase CLM98_11375 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_11375 IPR036291 CLM98_11375 CLM98_11380 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_11385 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit CLM98_11390 IPR000073 Alpha/beta hydrolase fold-1 CLM98_11390 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit CLM98_11390 IPR029058 Alpha/Beta hydrolase fold CLM98_11395 IPR007168 Phage shock protein, PspC, N-terminal CLM98_11405 IPR006076 FAD dependent oxidoreductase CLM98_11405 IPR036188 CLM98_11405 CLM98_11415 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_11415 IPR006641 YqgF/RNase H-like domain CLM98_11415 IPR010994 RuvA domain 2-like CLM98_11415 IPR012337 Ribonuclease H-like domain CLM98_11415 IPR012340 Nucleic acid-binding, OB-fold CLM98_11415 IPR018974 Tex-like protein, N-terminal CLM98_11415 IPR022967 RNA-binding domain, S1 CLM98_11415 IPR023319 Tex-like protein, HTH domain CLM98_11415 IPR023323 Tex-like domain CLM98_11415 IPR032639 CLM98_11415 CLM98_11415 IPR037027 CLM98_11415 CLM98_11420 IPR000014 PAS domain CLM98_11420 IPR001610 PAC motif CLM98_11420 IPR001789 Signal transduction response regulator, receiver domain CLM98_11420 IPR003018 GAF domain CLM98_11420 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_11420 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_11420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11420 IPR011006 CheY-like superfamily CLM98_11420 IPR013655 PAS fold-3 CLM98_11420 IPR013656 PAS fold-4 CLM98_11420 IPR029016 GAF domain-like CLM98_11420 IPR035965 CLM98_11420 CLM98_11420 IPR036097 CLM98_11420 CLM98_11420 IPR036890 CLM98_11420 CLM98_11425 IPR001789 Signal transduction response regulator, receiver domain CLM98_11425 IPR011006 CheY-like superfamily CLM98_11465 IPR008168 Cytochrome c, class IC CLM98_11465 IPR009056 Cytochrome c-like domain CLM98_11465 IPR036909 CLM98_11465 CLM98_11470 IPR009056 Cytochrome c-like domain CLM98_11470 IPR036909 CLM98_11470 CLM98_11475 IPR006143 RND efflux pump, membrane fusion protein CLM98_11475 IPR032317 CLM98_11475 CLM98_11480 IPR001036 Acriflavin resistance protein CLM98_11480 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11485 IPR001036 Acriflavin resistance protein CLM98_11485 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11495 IPR000887 KDPG/KHG aldolase CLM98_11495 IPR013785 Aldolase-type TIM barrel CLM98_11495 IPR031337 CLM98_11495 CLM98_11500 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLM98_11500 IPR004786 6-phosphogluconate dehydratase CLM98_11500 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLM98_11500 IPR037237 CLM98_11500 CLM98_11505 IPR005900 6-phosphogluconolactonase, DevB-type CLM98_11505 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CLM98_11505 IPR037171 CLM98_11505 CLM98_11510 IPR003836 Glucokinase CLM98_11515 IPR001282 Glucose-6-phosphate dehydrogenase CLM98_11515 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CLM98_11515 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CLM98_11515 IPR036291 CLM98_11515 CLM98_11520 IPR003439 ABC transporter-like CLM98_11520 IPR003593 AAA+ ATPase domain CLM98_11520 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_11520 IPR013611 Transport-associated OB, type 2 CLM98_11520 IPR017871 ABC transporter, conserved site CLM98_11520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11525 IPR006222 Glycine cleavage T-protein, N-terminal CLM98_11525 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CLM98_11525 IPR017703 YgfZ/GcvT conserved site CLM98_11530 IPR012875 Protein of unknown function DUF1674 CLM98_11535 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit CLM98_11535 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CLM98_11535 IPR034804 CLM98_11535 CLM98_11540 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit CLM98_11540 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CLM98_11540 IPR034804 CLM98_11540 CLM98_11545 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CLM98_11545 IPR003953 FAD binding domain CLM98_11545 IPR011281 Succinate dehydrogenase, flavoprotein subunit CLM98_11545 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CLM98_11545 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CLM98_11545 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CLM98_11545 IPR036188 CLM98_11545 CLM98_11545 IPR037099 CLM98_11545 CLM98_11555 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CLM98_11555 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_11555 IPR009051 Alpha-helical ferredoxin CLM98_11555 IPR012675 Beta-grasp domain CLM98_11555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_11555 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CLM98_11555 IPR036010 CLM98_11555 CLM98_11560 IPR005631 Flavinator of succinate dehydrogenase CLM98_11560 IPR036714 CLM98_11560 CLM98_11570 IPR003838 Permease FtsX-like CLM98_11570 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CLM98_11570 IPR025857 MacB-like periplasmic core domain CLM98_11575 IPR003439 ABC transporter-like CLM98_11575 IPR003593 AAA+ ATPase domain CLM98_11575 IPR011924 Lipoprotein releasing system, ATP-binding protein CLM98_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11580 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_11580 IPR036291 CLM98_11580 CLM98_11585 IPR001279 Beta-lactamase-like CLM98_11585 IPR004477 ComEC/Rec2-related protein CLM98_11585 IPR004797 Competence protein ComEC/Rec2 CLM98_11585 IPR025405 Domain of unknown function DUF4131 CLM98_11585 IPR036866 CLM98_11585 CLM98_11590 IPR002898 MotA/TolQ/ExbB proton channel CLM98_11595 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_11600 IPR003439 ABC transporter-like CLM98_11600 IPR003593 AAA+ ATPase domain CLM98_11600 IPR011527 ABC transporter type 1, transmembrane domain CLM98_11600 IPR011917 ABC transporter, lipid A export, MsbA CLM98_11600 IPR017871 ABC transporter, conserved site CLM98_11600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11600 IPR036640 CLM98_11600 CLM98_11605 IPR003758 Tetraacyldisaccharide 4'-kinase CLM98_11605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_11610 IPR003329 Acylneuraminate cytidylyltransferase CLM98_11610 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CLM98_11610 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_11615 IPR017867 Protein-tyrosine phosphatase, low molecular weight CLM98_11615 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLM98_11615 IPR036196 CLM98_11615 CLM98_11620 IPR001258 NHL repeat CLM98_11620 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_11620 IPR036249 CLM98_11620 CLM98_11625 IPR000305 GIY-YIG nuclease superfamily CLM98_11625 IPR001162 UvrC family homology region CLM98_11625 IPR001943 UVR domain CLM98_11625 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLM98_11625 IPR004791 UvrABC system, subunit C CLM98_11625 IPR010994 RuvA domain 2-like CLM98_11625 IPR035901 CLM98_11625 CLM98_11625 IPR036876 CLM98_11625 CLM98_11625 IPR038476 CLM98_11625 CLM98_11630 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_11630 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CLM98_11650 IPR000873 AMP-dependent synthetase/ligase CLM98_11650 IPR001242 Condensation domain CLM98_11650 IPR006162 Phosphopantetheine attachment site CLM98_11650 IPR009081 Acyl carrier protein-like CLM98_11650 IPR010071 Amino acid adenylation domain CLM98_11650 IPR020845 AMP-binding, conserved site CLM98_11650 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_11650 IPR025110 AMP-binding enzyme C-terminal domain CLM98_11650 IPR036736 CLM98_11650 CLM98_11655 IPR000873 AMP-dependent synthetase/ligase CLM98_11655 IPR001031 Thioesterase CLM98_11655 IPR001242 Condensation domain CLM98_11655 IPR006162 Phosphopantetheine attachment site CLM98_11655 IPR009081 Acyl carrier protein-like CLM98_11655 IPR010071 Amino acid adenylation domain CLM98_11655 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_11655 IPR020845 AMP-binding, conserved site CLM98_11655 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_11655 IPR025110 AMP-binding enzyme C-terminal domain CLM98_11655 IPR029058 Alpha/Beta hydrolase fold CLM98_11655 IPR036736 CLM98_11655 CLM98_11670 IPR002104 Integrase, catalytic CLM98_11670 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_11670 IPR013762 Integrase-like, catalytic core CLM98_11680 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_11680 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_11680 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_11680 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_11680 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_11680 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CLM98_11680 IPR036220 CLM98_11680 CLM98_11680 IPR036291 CLM98_11680 CLM98_11685 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLM98_11685 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 CLM98_11685 IPR023166 HI0933 insert-like domain CLM98_11685 IPR036188 CLM98_11685 CLM98_11690 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLM98_11700 IPR001763 Rhodanese-like domain CLM98_11700 IPR020936 Uncharacterised protein family UPF0176 CLM98_11700 IPR036873 CLM98_11700 CLM98_11705 IPR000792 Transcription regulator LuxR, C-terminal CLM98_11705 IPR001789 Signal transduction response regulator, receiver domain CLM98_11705 IPR011006 CheY-like superfamily CLM98_11705 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_11710 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_11710 IPR004659 Ribonuclease E/G CLM98_11710 IPR012340 Nucleic acid-binding, OB-fold CLM98_11710 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLM98_11710 IPR022967 RNA-binding domain, S1 CLM98_11710 IPR028878 Ribonuclease E CLM98_11715 IPR002942 RNA-binding S4 domain CLM98_11715 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_11715 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_11715 IPR006225 Pseudouridine synthase, RluC/RluD CLM98_11715 IPR020103 Pseudouridine synthase, catalytic domain CLM98_11715 IPR036986 CLM98_11715 CLM98_11720 IPR021728 Protein of unknown function DUF3300 CLM98_11725 IPR003689 Zinc/iron permease CLM98_11725 IPR023498 Zinc transporter ZupT CLM98_11730 IPR006260 TonB, C-terminal CLM98_11730 IPR037682 CLM98_11730 CLM98_11735 IPR001533 Transcriptional coactivator/pterin dehydratase CLM98_11735 IPR036428 CLM98_11735 CLM98_11740 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CLM98_11740 IPR017726 Fe/S biogenesis protein NfuA CLM98_11740 IPR034904 CLM98_11740 CLM98_11740 IPR035903 CLM98_11740 CLM98_11755 IPR007024 BLUF domain CLM98_11755 IPR036046 CLM98_11755 CLM98_11760 IPR002935 O-methyltransferase, family 3 CLM98_11760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_11765 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_11770 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CLM98_11770 IPR024078 Putative deacetylase LmbE-like domain CLM98_11775 IPR008715 SAM-dependent methyltransferase, NodS-related CLM98_11775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_11780 IPR001173 Glycosyltransferase 2-like CLM98_11780 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_11790 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CLM98_11790 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CLM98_11790 IPR036188 CLM98_11790 CLM98_11795 IPR002347 Glucose/ribitol dehydrogenase CLM98_11795 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_11795 IPR036291 CLM98_11795 CLM98_11800 IPR021096 Vibrio phage VSK, Orf152 CLM98_11845 IPR003512 Bacteriophage M13, G5P, DNA-binding CLM98_11845 IPR012340 Nucleic acid-binding, OB-fold CLM98_11860 IPR021096 Vibrio phage VSK, Orf152 CLM98_11875 IPR036188 CLM98_11875 CLM98_11880 IPR032816 CLM98_11880 CLM98_11895 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_11895 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_11895 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_11900 IPR016923 Uncharacterised conserved protein UCP029509, membrane CLM98_11905 IPR001466 Beta-lactamase-related CLM98_11905 IPR012338 Beta-lactamase/transpeptidase-like CLM98_11915 IPR001789 Signal transduction response regulator, receiver domain CLM98_11915 IPR007492 LytTR DNA-binding domain CLM98_11915 IPR011006 CheY-like superfamily CLM98_11920 IPR010559 Signal transduction histidine kinase, internal region CLM98_11920 IPR036890 CLM98_11920 CLM98_11935 IPR000209 Peptidase S8/S53 domain CLM98_11935 IPR005546 Autotransporter beta-domain CLM98_11935 IPR006315 Outer membrane autotransporter barrel CLM98_11935 IPR013425 Autotransporter-associated beta strand repeat CLM98_11935 IPR015500 Peptidase S8, subtilisin-related CLM98_11935 IPR036709 CLM98_11935 CLM98_11935 IPR036852 CLM98_11935 CLM98_11945 IPR006143 RND efflux pump, membrane fusion protein CLM98_11945 IPR032317 CLM98_11945 CLM98_11950 IPR001036 Acriflavin resistance protein CLM98_11950 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_11950 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_11955 IPR003423 Outer membrane efflux protein CLM98_11955 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_11960 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_11960 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_11960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_11960 IPR036097 CLM98_11960 CLM98_11960 IPR036890 CLM98_11960 CLM98_11965 IPR000792 Transcription regulator LuxR, C-terminal CLM98_11965 IPR001789 Signal transduction response regulator, receiver domain CLM98_11965 IPR011006 CheY-like superfamily CLM98_11965 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_11965 IPR036388 CLM98_11965 CLM98_11970 IPR005546 Autotransporter beta-domain CLM98_11970 IPR011050 Pectin lyase fold/virulence factor CLM98_11970 IPR013425 Autotransporter-associated beta strand repeat CLM98_11970 IPR024973 ESPR domain CLM98_11970 IPR036709 CLM98_11970 CLM98_11975 IPR001633 EAL domain CLM98_11975 IPR029016 GAF domain-like CLM98_11975 IPR029787 Nucleotide cyclase CLM98_11975 IPR035919 CLM98_11975 CLM98_11980 IPR009784 Protein of unknown function DUF1349 CLM98_11980 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_11980 IPR015987 Uncharacterised conserved protein UCP022704 CLM98_11990 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CLM98_11995 IPR009078 Ferritin-like superfamily CLM98_11995 IPR010287 Domain of unknown function DUF892 CLM98_11995 IPR012347 Ferritin-related CLM98_12005 IPR019626 Stress-induced protein, KGG, repeat CLM98_12020 IPR000878 Tetrapyrrole methylase CLM98_12020 IPR006367 Sirohaem synthase, N-terminal CLM98_12020 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_12020 IPR019478 Sirohaem synthase, dimerisation domain CLM98_12020 IPR028281 Siroheme synthase, central domain CLM98_12020 IPR035996 CLM98_12020 CLM98_12020 IPR036291 CLM98_12020 CLM98_12025 IPR020017 XapX domain CLM98_12030 IPR020017 XapX domain CLM98_12035 IPR010290 Transmembrane secretion effector CLM98_12035 IPR036259 CLM98_12035 CLM98_12045 IPR032808 CLM98_12045 CLM98_12050 IPR000868 Isochorismatase-like CLM98_12050 IPR036380 CLM98_12050 CLM98_12055 IPR009057 Homeodomain-like CLM98_12055 IPR018060 DNA binding HTH domain, AraC-type CLM98_12060 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_12060 IPR011123 Two component regulator three Y CLM98_12060 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_12060 IPR013783 Immunoglobulin-like fold CLM98_12060 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_12060 IPR036890 CLM98_12060 CLM98_12065 IPR000792 Transcription regulator LuxR, C-terminal CLM98_12065 IPR001789 Signal transduction response regulator, receiver domain CLM98_12065 IPR011006 CheY-like superfamily CLM98_12065 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_12070 IPR003660 HAMP linker domain CLM98_12070 IPR029151 Periplasmic sensor domain-like CLM98_12070 IPR033462 CLM98_12070 CLM98_12085 IPR000847 Transcription regulator HTH, LysR CLM98_12085 IPR005119 LysR, substrate-binding CLM98_12085 IPR036388 CLM98_12085 CLM98_12085 IPR036390 CLM98_12085 CLM98_12090 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CLM98_12090 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_12095 IPR018752 Uncharacterised protein family UPF0753 CLM98_12105 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_12105 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_12110 IPR007948 Protein of unknown function DUF736 CLM98_12115 IPR001405 RadC protein CLM98_12115 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_12115 IPR025657 RadC-like JAB domain CLM98_12120 IPR009061 DNA binding domain, putative CLM98_12120 IPR010260 Bacteriophage P4, Orf88 CLM98_12130 IPR014942 Protein of unknown function DUF1814 CLM98_12135 IPR021561 Protein of unknown function DUF2893 CLM98_12135 IPR033455 CLM98_12135 CLM98_12140 IPR002104 Integrase, catalytic CLM98_12140 IPR004107 Integrase, SAM-like, N-terminal CLM98_12140 IPR010998 Integrase, Lambda-type, N-terminal CLM98_12140 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_12140 IPR013762 Integrase-like, catalytic core CLM98_12140 IPR025166 Domain of unknown function DUF4102 CLM98_12140 IPR038488 CLM98_12140 CLM98_12150 IPR000531 TonB-dependent receptor, beta-barrel CLM98_12150 IPR010105 TonB-dependent siderophore receptor CLM98_12150 IPR012910 TonB-dependent receptor, plug CLM98_12150 IPR036942 CLM98_12150 CLM98_12150 IPR037066 CLM98_12150 CLM98_12155 IPR012931 TraG-like, N-terminal CLM98_12160 IPR022213 Protein of unknown function DUF3742 CLM98_12165 IPR002716 PIN domain CLM98_12165 IPR022907 VapC family CLM98_12165 IPR029060 PIN domain-like CLM98_12170 IPR007159 AbrB-like domain CLM98_12170 IPR037914 CLM98_12170 CLM98_12175 IPR032581 CLM98_12175 CLM98_12185 IPR007627 RNA polymerase sigma-70 region 2 CLM98_12185 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_12185 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_12185 IPR013325 RNA polymerase sigma factor, region 2 CLM98_12185 IPR014284 RNA polymerase sigma-70 like domain CLM98_12185 IPR036388 CLM98_12185 CLM98_12190 IPR006860 FecR protein CLM98_12190 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CLM98_12190 IPR032623 CLM98_12190 CLM98_12195 IPR000531 TonB-dependent receptor, beta-barrel CLM98_12195 IPR011662 Secretin/TonB, short N-terminal CLM98_12195 IPR012910 TonB-dependent receptor, plug CLM98_12195 IPR037066 CLM98_12195 CLM98_12205 IPR024399 Protein of unknown function DUF2628 CLM98_12210 IPR011093 Domain of unknown function DUF1528, C-terminal CLM98_12210 IPR011119 Uncharacterised domain, helicase/relaxase, putative CLM98_12210 IPR022391 Integrating conjugative element relaxase, PFGI-1 class CLM98_12210 IPR036388 CLM98_12210 CLM98_12210 IPR036390 CLM98_12210 CLM98_12230 IPR003997 RTX secretion protein D, Gram-negative bacteria CLM98_12230 IPR006144 Secretion protein HlyD, conserved site CLM98_12230 IPR010129 Type I secretion membrane fusion protein, HlyD CLM98_12230 IPR039562 CLM98_12230 CLM98_12235 IPR003439 ABC transporter-like CLM98_12235 IPR003593 AAA+ ATPase domain CLM98_12235 IPR010132 ATPase, type I secretion system, HlyB CLM98_12235 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12235 IPR017871 ABC transporter, conserved site CLM98_12235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12235 IPR036640 CLM98_12235 CLM98_12240 IPR010260 Bacteriophage P4, Orf88 CLM98_12245 IPR025669 AAA domain CLM98_12245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12280 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_12280 IPR012340 Nucleic acid-binding, OB-fold CLM98_12285 IPR003601 DNA topoisomerase, type IA, domain 2 CLM98_12285 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLM98_12285 IPR005738 DNA topoisomerase III CLM98_12285 IPR006171 Toprim domain CLM98_12285 IPR013497 DNA topoisomerase, type IA, central CLM98_12285 IPR013498 DNA topoisomerase, type IA, zn finger CLM98_12285 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLM98_12285 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLM98_12285 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLM98_12285 IPR023405 DNA topoisomerase, type IA, core domain CLM98_12285 IPR023406 DNA topoisomerase, type IA, active site CLM98_12290 IPR001525 C-5 cytosine methyltransferase CLM98_12290 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLM98_12290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_12300 IPR003959 ATPase, AAA-type, core CLM98_12300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12330 IPR021436 Protein of unknown function DUF3085 CLM98_12335 IPR002104 Integrase, catalytic CLM98_12335 IPR004107 Integrase, SAM-like, N-terminal CLM98_12335 IPR010998 Integrase, Lambda-type, N-terminal CLM98_12335 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_12335 IPR013762 Integrase-like, catalytic core CLM98_12335 IPR025166 Domain of unknown function DUF4102 CLM98_12335 IPR038488 CLM98_12335 CLM98_12340 IPR009362 Protein of unknown function DUF1016 CLM98_12350 IPR000620 Drug/metabolite transporter CLM98_12355 IPR000620 Drug/metabolite transporter CLM98_12360 IPR001647 DNA-binding HTH domain, TetR-type CLM98_12360 IPR009057 Homeodomain-like CLM98_12365 IPR003680 Flavodoxin-like fold CLM98_12365 IPR029039 Flavoprotein-like CLM98_12370 IPR004045 Glutathione S-transferase, N-terminal CLM98_12370 IPR004046 Glutathione S-transferase, C-terminal CLM98_12370 IPR036249 CLM98_12370 CLM98_12370 IPR036282 CLM98_12370 CLM98_12375 IPR008794 Proline racemase family CLM98_12380 IPR005025 NADPH-dependent FMN reductase-like CLM98_12380 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLM98_12380 IPR029039 Flavoprotein-like CLM98_12380 IPR035959 CLM98_12380 CLM98_12385 IPR002347 Glucose/ribitol dehydrogenase CLM98_12385 IPR036291 CLM98_12385 CLM98_12390 IPR011701 Major facilitator superfamily CLM98_12390 IPR036259 CLM98_12390 CLM98_12395 IPR009057 Homeodomain-like CLM98_12395 IPR011051 RmlC-like cupin domain CLM98_12395 IPR014710 RmlC-like jelly roll fold CLM98_12395 IPR018060 DNA binding HTH domain, AraC-type CLM98_12400 IPR021960 Protein of unknown function DUF3577 CLM98_12405 IPR021693 Protein of unknown function DUF3275 CLM98_12430 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_12430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_12435 IPR001650 Helicase, C-terminal CLM98_12435 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12435 IPR038718 CLM98_12435 CLM98_12450 IPR012433 Protein of unknown function DUF1629 CLM98_12455 IPR032871 CLM98_12455 CLM98_12490 IPR022260 Integrating conjugative element protein PilL, PFGI-1 CLM98_12500 IPR022293 Integrating conjugative element protein, PFL4693 CLM98_12505 IPR008258 Lytic transglycosylase-like SLT domain CLM98_12505 IPR023346 Lysozyme-like domain CLM98_12510 IPR021300 Integrating conjugative element protein, PFL4695 CLM98_12515 IPR022458 Conjugative coupling factor TraG/TraD CLM98_12515 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 CLM98_12515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12515 IPR032689 CLM98_12515 CLM98_12520 IPR022266 Integrating conjugative element protein, PFL4697-type CLM98_12525 IPR022205 Protein of unknown function DUF3732 CLM98_12525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12525 IPR038729 CLM98_12525 CLM98_12545 IPR013986 DExx box DNA helicase domain CLM98_12545 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_12545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12555 IPR025392 Domain of unknown function DUF4124 CLM98_12570 IPR019110 Uncharacterised protein family, RAQPRD CLM98_12575 IPR021676 Protein of unknown function DUF3262 CLM98_12580 IPR021356 Integrating conjugative element protein PFL4702 CLM98_12585 IPR021877 Protein of unknown function DUF3487 CLM98_12590 IPR021548 Protein of unknown function DUF2895 CLM98_12595 IPR021844 Integrating conjugative element protein, PFL4704 CLM98_12600 IPR021207 Integrating conjugative element protein, PFL4705 CLM98_12605 IPR022262 Lipoprotein, putative CLM98_12610 IPR022303 Conjugative transfer ATPase CLM98_12610 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CLM98_12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12615 IPR012336 Thioredoxin-like fold CLM98_12615 IPR036249 CLM98_12615 CLM98_12620 IPR000847 Transcription regulator HTH, LysR CLM98_12620 IPR005119 LysR, substrate-binding CLM98_12620 IPR036388 CLM98_12620 CLM98_12620 IPR036390 CLM98_12620 CLM98_12625 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLM98_12625 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_12625 IPR013328 Dehydrogenase, multihelical CLM98_12625 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CLM98_12625 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLM98_12625 IPR036291 CLM98_12625 CLM98_12630 IPR005064 Bordetella uptake gene CLM98_12635 IPR009569 Amino acid synthesis, putative CLM98_12635 IPR035936 CLM98_12635 CLM98_12645 IPR001405 RadC protein CLM98_12645 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_12645 IPR025657 RadC-like JAB domain CLM98_12650 IPR011090 Integrating conjugative element protein, PFL4709 CLM98_12655 IPR009649 TraU CLM98_12655 IPR026331 Integrating conjugative element protein PFL_4710 CLM98_12660 IPR021204 Integrating conjugative element protein, PFL4711 CLM98_12665 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_12680 IPR002104 Integrase, catalytic CLM98_12680 IPR004107 Integrase, SAM-like, N-terminal CLM98_12680 IPR010998 Integrase, Lambda-type, N-terminal CLM98_12680 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_12680 IPR013762 Integrase-like, catalytic core CLM98_12680 IPR025166 Domain of unknown function DUF4102 CLM98_12680 IPR038488 CLM98_12680 CLM98_12685 IPR001674 GMP synthase, C-terminal CLM98_12685 IPR004739 GMP synthase, N-terminal CLM98_12685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_12685 IPR017926 Glutamine amidotransferase CLM98_12685 IPR022310 NAD/GMP synthase CLM98_12685 IPR022955 GMP synthase CLM98_12685 IPR029062 Class I glutamine amidotransferase-like CLM98_12690 IPR000644 CBS domain CLM98_12690 IPR001093 IMP dehydrogenase/GMP reductase CLM98_12690 IPR005990 Inosine-5'-monophosphate dehydrogenase CLM98_12690 IPR013785 Aldolase-type TIM barrel CLM98_12690 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLM98_12695 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CLM98_12695 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLM98_12695 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLM98_12695 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CLM98_12695 IPR036291 CLM98_12695 CLM98_12700 IPR023163 SMc04008-like domain CLM98_12700 IPR036810 CLM98_12700 CLM98_12705 IPR003148 Regulator of K+ conductance, N-terminal CLM98_12705 IPR004771 K+/H+ exchanger CLM98_12705 IPR006153 Cation/H+ exchanger CLM98_12705 IPR036291 CLM98_12705 CLM98_12705 IPR038770 CLM98_12705 CLM98_12710 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CLM98_12710 IPR005835 Nucleotidyl transferase CLM98_12710 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_12715 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLM98_12715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_12715 IPR036291 CLM98_12715 CLM98_12720 IPR000715 Glycosyl transferase, family 4 CLM98_12725 IPR011990 Tetratricopeptide-like helical domain CLM98_12725 IPR019734 Tetratricopeptide repeat CLM98_12725 IPR030865 CLM98_12725 CLM98_12730 IPR010445 Protein of unknown function DUF1049 CLM98_12735 IPR000119 Histone-like bacterial DNA-binding protein CLM98_12735 IPR005685 Integration host factor, beta subunit CLM98_12735 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLM98_12735 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_12740 IPR000110 Ribosomal protein S1 CLM98_12740 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_12740 IPR012340 Nucleic acid-binding, OB-fold CLM98_12740 IPR022967 RNA-binding domain, S1 CLM98_12745 IPR003136 Cytidylate kinase CLM98_12745 IPR011994 Cytidylate kinase domain CLM98_12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12750 IPR000473 Ribosomal protein L36 CLM98_12750 IPR035977 CLM98_12750 CLM98_12765 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CLM98_12770 IPR003010 Carbon-nitrogen hydrolase CLM98_12770 IPR036526 CLM98_12770 CLM98_12775 IPR016181 Acyl-CoA N-acyltransferase CLM98_12780 IPR002816 Pheromone shutdown, TraB CLM98_12780 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal CLM98_12785 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_12785 IPR036691 CLM98_12785 CLM98_12790 IPR000421 Coagulation factor 5/8 C-terminal type domain CLM98_12790 IPR008928 Six-hairpin glycosidase-like CLM98_12790 IPR008979 Galactose-binding domain-like CLM98_12790 IPR012341 Six-hairpin glycosidase CLM98_12790 IPR032790 CLM98_12790 CLM98_12795 IPR000515 MetI-like domain CLM98_12795 IPR035906 CLM98_12795 CLM98_12800 IPR000515 MetI-like domain CLM98_12800 IPR035906 CLM98_12800 CLM98_12805 IPR006059 Bacterial extracellular solute-binding, family 1 CLM98_12810 IPR016883 Uncharacterised conserved protein UCP028431 CLM98_12810 IPR019282 Domain of unknown function DUF2329 CLM98_12815 IPR000531 TonB-dependent receptor, beta-barrel CLM98_12815 IPR013784 Carbohydrate-binding-like fold CLM98_12820 IPR000843 Transcription regulator HTH, LacI CLM98_12820 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_12820 IPR028082 Periplasmic binding protein-like I CLM98_12825 IPR002634 BolA protein CLM98_12825 IPR036065 CLM98_12825 CLM98_12830 IPR005545 YCII-related CLM98_12830 IPR011008 Dimeric alpha-beta barrel CLM98_12835 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA CLM98_12840 IPR005234 Chromosome segregation/condensation protein ScpB CLM98_12840 IPR036388 CLM98_12840 CLM98_12840 IPR036390 CLM98_12840 CLM98_12845 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_12845 IPR002942 RNA-binding S4 domain CLM98_12845 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_12845 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_12845 IPR020103 Pseudouridine synthase, catalytic domain CLM98_12845 IPR036986 CLM98_12845 CLM98_12855 IPR007788 Glutamine cyclotransferase CLM98_12855 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CLM98_12855 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_12860 IPR003010 Carbon-nitrogen hydrolase CLM98_12860 IPR036526 CLM98_12860 CLM98_12865 IPR004839 Aminotransferase, class I/classII CLM98_12865 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_12865 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_12865 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_12870 IPR003439 ABC transporter-like CLM98_12870 IPR003593 AAA+ ATPase domain CLM98_12870 IPR005895 ABC transporter, haem export, CcmA CLM98_12870 IPR017871 ABC transporter, conserved site CLM98_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12875 IPR003544 Cytochrome c-type biogenesis protein CcmB CLM98_12875 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CLM98_12880 IPR002541 Cytochrome c assembly protein CLM98_12880 IPR003557 Cytochrome c-type biogenesis protein CcmC CLM98_12885 IPR007078 Haem exporter protein D (CcmD) CLM98_12890 IPR004329 CcmE/CycJ protein CLM98_12890 IPR036127 CLM98_12890 CLM98_12895 IPR002541 Cytochrome c assembly protein CLM98_12895 IPR003567 Cytochrome c-type biogenesis protein CLM98_12895 IPR003568 Cytochrome c-type biogenesis protein CcmF CLM98_12895 IPR032523 CLM98_12895 CLM98_12900 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLM98_12900 IPR013740 Redoxin CLM98_12900 IPR017937 Thioredoxin, conserved site CLM98_12900 IPR036249 CLM98_12900 CLM98_12905 IPR005616 Cytochrome C biogenesis protein CcmH CLM98_12905 IPR038297 CLM98_12905 CLM98_12910 IPR011990 Tetratricopeptide-like helical domain CLM98_12915 IPR000073 Alpha/beta hydrolase fold-1 CLM98_12915 IPR008220 Homoserine acetyltransferase CLM98_12915 IPR029058 Alpha/Beta hydrolase fold CLM98_12920 IPR002059 Cold-shock protein, DNA-binding CLM98_12920 IPR010718 Protein of unknown function DUF1294 CLM98_12920 IPR011129 Cold shock protein CLM98_12920 IPR012340 Nucleic acid-binding, OB-fold CLM98_12925 IPR003439 ABC transporter-like CLM98_12925 IPR003593 AAA+ ATPase domain CLM98_12925 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12925 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CLM98_12925 IPR017871 ABC transporter, conserved site CLM98_12925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12925 IPR036640 CLM98_12925 CLM98_12930 IPR003439 ABC transporter-like CLM98_12930 IPR003593 AAA+ ATPase domain CLM98_12930 IPR011527 ABC transporter type 1, transmembrane domain CLM98_12930 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CLM98_12930 IPR017871 ABC transporter, conserved site CLM98_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_12930 IPR036640 CLM98_12930 CLM98_12935 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CLM98_12940 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CLM98_12945 IPR011724 Cyd operon protein YbgT CLM98_12945 IPR012994 Membrane bound YbgT-like CLM98_12955 IPR011701 Major facilitator superfamily CLM98_12955 IPR036259 CLM98_12955 CLM98_12960 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CLM98_12960 IPR005674 CocE/Serine esterase CLM98_12960 IPR008979 Galactose-binding domain-like CLM98_12960 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CLM98_12960 IPR029058 Alpha/Beta hydrolase fold CLM98_12970 IPR000965 Gamma-glutamyl phosphate reductase GPR CLM98_12970 IPR012134 Glutamate-5-semialdehyde dehydrogenase CLM98_12970 IPR015590 Aldehyde dehydrogenase domain CLM98_12970 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_12970 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_12970 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_12970 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CLM98_12975 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_12975 IPR001057 Glutamate/acetylglutamate kinase CLM98_12975 IPR002478 PUA domain CLM98_12975 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CLM98_12975 IPR011529 Glutamate 5-kinase CLM98_12975 IPR015947 PUA-like domain CLM98_12975 IPR019797 Glutamate 5-kinase, conserved site CLM98_12975 IPR036393 CLM98_12975 CLM98_12975 IPR036974 CLM98_12975 CLM98_12980 IPR005545 YCII-related CLM98_12980 IPR011008 Dimeric alpha-beta barrel CLM98_12985 IPR000362 Fumarate lyase family CLM98_12985 IPR008948 L-Aspartase-like CLM98_12985 IPR009049 Argininosuccinate lyase CLM98_12985 IPR020557 Fumarate lyase, conserved site CLM98_12985 IPR022761 Fumarate lyase, N-terminal CLM98_12985 IPR024083 Fumarase/histidase, N-terminal CLM98_12990 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLM98_12990 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CLM98_12990 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CLM98_12990 IPR036291 CLM98_12990 CLM98_12995 IPR000182 GNAT domain CLM98_12995 IPR016181 Acyl-CoA N-acyltransferase CLM98_13000 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_13000 IPR004662 Acetylglutamate kinase CLM98_13000 IPR006855 Domain of unknown function DUF619 CLM98_13000 IPR011242 N-acetylglutamate kinase, DUF619 domain-containing CLM98_13000 IPR016181 Acyl-CoA N-acyltransferase CLM98_13000 IPR036393 CLM98_13000 CLM98_13005 IPR002933 Peptidase M20 CLM98_13005 IPR011650 Peptidase M20, dimerisation domain CLM98_13005 IPR036264 CLM98_13005 CLM98_13010 IPR000182 GNAT domain CLM98_13010 IPR016181 Acyl-CoA N-acyltransferase CLM98_13015 IPR001518 Argininosuccinate synthase CLM98_13015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13015 IPR018223 Argininosuccinate synthase, conserved site CLM98_13015 IPR023434 Argininosuccinate synthase, type 1 subfamily CLM98_13015 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CLM98_13020 IPR002082 Aspartate carbamoyltransferase CLM98_13020 IPR006130 Aspartate/ornithine carbamoyltransferase CLM98_13020 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLM98_13020 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLM98_13020 IPR036901 CLM98_13020 CLM98_13030 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_13030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13030 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CLM98_13030 IPR015803 Cysteine-tRNA ligase CLM98_13030 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CLM98_13030 IPR032678 CLM98_13030 CLM98_13035 IPR003808 Fe-S metabolism associated domain, SufE-like CLM98_13040 IPR010290 Transmembrane secretion effector CLM98_13040 IPR036259 CLM98_13040 CLM98_13045 IPR000962 Zinc finger, DksA/TraR C4-type CLM98_13045 IPR012784 RNA polymerase-binding transcription factor DksA CLM98_13045 IPR037187 CLM98_13045 CLM98_13050 IPR002696 Putative membrane protein insertion efficiency factor CLM98_13055 IPR002195 Dihydroorotase, conserved site CLM98_13055 IPR006680 Amidohydrolase 1 CLM98_13055 IPR011059 Metal-dependent hydrolase, composite domain CLM98_13055 IPR032466 CLM98_13055 CLM98_13060 IPR011055 Duplicated hybrid motif CLM98_13060 IPR016047 Peptidase M23 CLM98_13065 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_13075 IPR002293 Amino acid/polyamine transporter I CLM98_13075 IPR004757 Ethanolamine permease CLM98_13080 IPR010628 Ethanolamine ammonia lyase large subunit CLM98_13080 IPR013785 Aldolase-type TIM barrel CLM98_13085 IPR009246 Ethanolamine ammonia-lyase light chain CLM98_13095 IPR001279 Beta-lactamase-like CLM98_13095 IPR036866 CLM98_13095 CLM98_13100 IPR012349 FMN-binding split barrel CLM98_13100 IPR038725 CLM98_13100 CLM98_13110 IPR009003 Trypsin-like cysteine/serine peptidase domain CLM98_13120 IPR002022 Pectate lyase/Amb allergen CLM98_13120 IPR011050 Pectin lyase fold/virulence factor CLM98_13120 IPR012334 Pectin lyase fold CLM98_13130 IPR000743 Glycoside hydrolase, family 28 CLM98_13130 IPR011050 Pectin lyase fold/virulence factor CLM98_13130 IPR012334 Pectin lyase fold CLM98_13135 IPR008949 Terpenoid synthase CLM98_13140 IPR006346 2-phosphoglycolate phosphatase, prokaryotic CLM98_13140 IPR006439 HAD hydrolase, subfamily IA CLM98_13140 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_13140 IPR023214 HAD-like domain CLM98_13140 IPR036412 CLM98_13140 CLM98_13140 IPR037512 CLM98_13140 CLM98_13145 IPR010233 Ubiquinone biosynthesis O-methyltransferase CLM98_13145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_13150 IPR006680 Amidohydrolase 1 CLM98_13150 IPR011059 Metal-dependent hydrolase, composite domain CLM98_13150 IPR032466 CLM98_13150 CLM98_13160 IPR001059 Translation elongation factor P/YeiP, central CLM98_13160 IPR008991 Translation protein SH3-like domain CLM98_13160 IPR011768 Translation elongation factor P CLM98_13160 IPR012340 Nucleic acid-binding, OB-fold CLM98_13160 IPR013185 Translation elongation factor, KOW-like CLM98_13160 IPR013852 Translation elongation factor P/YeiP, conserved site CLM98_13160 IPR014722 Ribosomal protein L2 domain 2 CLM98_13160 IPR015365 Elongation factor P, C-terminal CLM98_13160 IPR020599 Translation elongation factor P/YeiP CLM98_13165 IPR003739 Lysine-2,3-aminomutase family CLM98_13165 IPR013785 Aldolase-type TIM barrel CLM98_13165 IPR022462 Lysine-2,3-aminomutase-like CLM98_13170 IPR000160 GGDEF domain CLM98_13170 IPR001633 EAL domain CLM98_13170 IPR003660 HAMP linker domain CLM98_13170 IPR029151 Periplasmic sensor domain-like CLM98_13170 IPR029787 Nucleotide cyclase CLM98_13170 IPR033463 CLM98_13170 CLM98_13170 IPR035919 CLM98_13170 CLM98_13180 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_13180 IPR004384 RNA methyltransferase TrmH, group 1 CLM98_13180 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_13180 IPR029028 Alpha/beta knot methyltransferases CLM98_13185 IPR000760 Inositol monophosphatase CLM98_13185 IPR020550 Inositol monophosphatase, conserved site CLM98_13185 IPR020583 Inositol monophosphatase, metal-binding site CLM98_13185 IPR022337 Inositol monophosphatase, SuhB CLM98_13190 IPR001189 Manganese/iron superoxide dismutase CLM98_13190 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLM98_13190 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLM98_13190 IPR019833 Manganese/iron superoxide dismutase, binding site CLM98_13190 IPR036314 CLM98_13190 CLM98_13190 IPR036324 CLM98_13190 CLM98_13195 IPR000026 Guanine-specific ribonuclease N1/T1 CLM98_13195 IPR016191 Ribonuclease/ribotoxin CLM98_13200 IPR000468 Barstar (barnase inhibitor) CLM98_13200 IPR035905 CLM98_13200 CLM98_13210 IPR003439 ABC transporter-like CLM98_13210 IPR003593 AAA+ ATPase domain CLM98_13210 IPR017871 ABC transporter, conserved site CLM98_13210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13210 IPR032524 CLM98_13210 CLM98_13210 IPR032781 CLM98_13210 CLM98_13210 IPR037118 CLM98_13210 CLM98_13215 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLM98_13215 IPR001650 Helicase, C-terminal CLM98_13215 IPR005580 DbpA, RNA-binding CLM98_13215 IPR011545 DEAD/DEAH box helicase domain CLM98_13215 IPR012677 Nucleotide-binding, alpha-beta plait CLM98_13215 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_13215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13220 IPR000836 Phosphoribosyltransferase domain CLM98_13220 IPR005764 Adenine phosphoribosyl transferase CLM98_13220 IPR029057 Phosphoribosyltransferase-like CLM98_13225 IPR003846 Uncharacterised protein family UPF0061 CLM98_13230 IPR013094 Alpha/beta hydrolase fold-3 CLM98_13230 IPR029058 Alpha/Beta hydrolase fold CLM98_13235 IPR004045 Glutathione S-transferase, N-terminal CLM98_13235 IPR004046 Glutathione S-transferase, C-terminal CLM98_13235 IPR036249 CLM98_13235 CLM98_13235 IPR036282 CLM98_13235 CLM98_13240 IPR002059 Cold-shock protein, DNA-binding CLM98_13240 IPR011129 Cold shock protein CLM98_13240 IPR012156 Cold shock, CspA CLM98_13240 IPR012340 Nucleic acid-binding, OB-fold CLM98_13240 IPR019844 Cold-shock conserved site CLM98_13245 IPR009822 YaeQ CLM98_13245 IPR011335 Restriction endonuclease type II-like CLM98_13245 IPR038590 CLM98_13245 CLM98_13250 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLM98_13250 IPR023166 HI0933 insert-like domain CLM98_13250 IPR036188 CLM98_13250 CLM98_13255 IPR000014 PAS domain CLM98_13255 IPR000160 GGDEF domain CLM98_13255 IPR001633 EAL domain CLM98_13255 IPR011006 CheY-like superfamily CLM98_13255 IPR029787 Nucleotide cyclase CLM98_13255 IPR035919 CLM98_13255 CLM98_13255 IPR035965 CLM98_13255 CLM98_13260 IPR001915 Peptidase M48 CLM98_13260 IPR022919 Peptidase M48, protease HtpX, putative CLM98_13265 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_13265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13265 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_13265 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CLM98_13270 IPR002347 Glucose/ribitol dehydrogenase CLM98_13270 IPR011283 Acetoacetyl-CoA reductase CLM98_13270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_13270 IPR036291 CLM98_13270 CLM98_13275 IPR007897 PHB accumulation regulatory CLM98_13275 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CLM98_13275 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CLM98_13285 IPR002816 Pheromone shutdown, TraB CLM98_13290 IPR012467 Protein of unknown function DUF1684 CLM98_13295 IPR002099 DNA mismatch repair protein family CLM98_13295 IPR013507 DNA mismatch repair protein, C-terminal CLM98_13295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_13295 IPR014762 DNA mismatch repair, conserved site CLM98_13295 IPR014790 MutL, C-terminal, dimerisation CLM98_13295 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_13295 IPR020667 DNA mismatch repair protein, MutL CLM98_13295 IPR036890 CLM98_13295 CLM98_13295 IPR037198 CLM98_13295 CLM98_13300 IPR002508 Cell wall hydrolase/autolysin, catalytic CLM98_13300 IPR021731 AMIN domain CLM98_13305 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CLM98_13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13310 IPR000631 YjeF C-terminal domain CLM98_13310 IPR004443 YjeF N-terminal domain CLM98_13310 IPR017953 Carbohydrate kinase, predicted, conserved site CLM98_13310 IPR029056 Ribokinase-like CLM98_13310 IPR030677 CLM98_13310 CLM98_13310 IPR036652 CLM98_13310 CLM98_13315 IPR004453 Epoxyqueuosine reductase QueG CLM98_13315 IPR013542 Domain of unknown function DUF1730 CLM98_13315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_13320 IPR003753 Exonuclease VII, large subunit CLM98_13320 IPR020579 Exonuclease VII, large subunit, C-terminal CLM98_13320 IPR025824 OB-fold nucleic acid binding domain CLM98_13325 IPR010333 Bacterial virulence CLM98_13325 IPR011225 Type IV secretory pathway, VirJ component CLM98_13325 IPR029058 Alpha/Beta hydrolase fold CLM98_13330 IPR005532 Formylglycine-generating sulphatase enzyme domain CLM98_13330 IPR016187 C-type lectin fold CLM98_13345 IPR002121 HRDC domain CLM98_13345 IPR002562 3'-5' exonuclease domain CLM98_13345 IPR006292 Ribonuclease D CLM98_13345 IPR010997 HRDC-like CLM98_13345 IPR012337 Ribonuclease H-like domain CLM98_13345 IPR036397 CLM98_13345 CLM98_13350 IPR012309 DNA ligase, ATP-dependent, C-terminal CLM98_13350 IPR012310 DNA ligase, ATP-dependent, central CLM98_13350 IPR012340 Nucleic acid-binding, OB-fold CLM98_13350 IPR014143 DNA ligase D CLM98_13350 IPR014144 DNA ligase D, 3'-phosphoesterase domain CLM98_13350 IPR014145 DNA polymerase LigD, polymerase domain CLM98_13350 IPR014146 DNA polymerase LigD, ligase domain CLM98_13355 IPR022037 Protein of unknown function DUF3606 CLM98_13360 IPR001801 Histone-like protein H-NS CLM98_13360 IPR027444 Histone-like protein H-NS, C-terminal domain CLM98_13370 IPR002104 Integrase, catalytic CLM98_13370 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_13370 IPR013762 Integrase-like, catalytic core CLM98_13420 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLM98_13420 IPR035093 CLM98_13420 CLM98_13425 IPR002145 Ribbon-helix-helix protein, copG CLM98_13425 IPR010985 Ribbon-helix-helix CLM98_13425 IPR013321 Arc-type ribbon-helix-helix CLM98_13440 IPR006118 Recombinase, conserved site CLM98_13440 IPR006119 Resolvase, N-terminal CLM98_13440 IPR036162 CLM98_13440 CLM98_13445 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 CLM98_13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13455 IPR003356 DNA methylase, adenine-specific CLM98_13455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_13460 IPR019072 Restriction endonuclease, type II, XamI CLM98_13470 IPR012912 Plasmid pRiA4b, Orf3 CLM98_13470 IPR024047 Protein MM3350-like domain CLM98_13480 IPR002145 Ribbon-helix-helix protein, copG CLM98_13490 IPR006881 Plasmid encoded RepA protein CLM98_13500 IPR039444 CLM98_13500 CLM98_13505 IPR002789 Domain of unknown function DUF87 CLM98_13505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13510 IPR000160 GGDEF domain CLM98_13510 IPR003018 GAF domain CLM98_13510 IPR029016 GAF domain-like CLM98_13510 IPR029787 Nucleotide cyclase CLM98_13515 IPR002545 CheW-like protein CLM98_13515 IPR036061 CLM98_13515 CLM98_13520 IPR003660 HAMP linker domain CLM98_13520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_13520 IPR004090 Chemotaxis methyl-accepting receptor CLM98_13520 IPR024478 4HB MCP domain CLM98_13525 IPR003180 Methylpurine-DNA glycosylase (MPG) CLM98_13525 IPR011034 Formyl transferase, C-terminal-like CLM98_13525 IPR036995 CLM98_13525 CLM98_13530 IPR001650 Helicase, C-terminal CLM98_13530 IPR011545 DEAD/DEAH box helicase domain CLM98_13530 IPR013701 DEAD/H associated CLM98_13530 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13540 IPR021732 Protein of unknown function DUF3301 CLM98_13550 IPR007481 Stringent starvation protein B CLM98_13550 IPR036760 CLM98_13550 CLM98_13555 IPR004045 Glutathione S-transferase, N-terminal CLM98_13555 IPR004046 Glutathione S-transferase, C-terminal CLM98_13555 IPR036249 CLM98_13555 CLM98_13555 IPR036282 CLM98_13555 CLM98_13560 IPR002326 Cytochrome c1 CLM98_13560 IPR036909 CLM98_13560 CLM98_13565 IPR005797 Cytochrome b/b6, N-terminal CLM98_13565 IPR005798 Cytochrome b/b6, C-terminal CLM98_13565 IPR016174 Di-haem cytochrome, transmembrane CLM98_13565 IPR027387 Cytochrome b/b6-like domain CLM98_13565 IPR030689 CLM98_13565 CLM98_13565 IPR036150 CLM98_13565 CLM98_13570 IPR005805 Rieske iron-sulphur protein, C-terminal CLM98_13570 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CLM98_13570 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_13570 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CLM98_13570 IPR036922 CLM98_13570 CLM98_13580 IPR000189 Prokaryotic transglycosylase, active site CLM98_13580 IPR008258 Lytic transglycosylase-like SLT domain CLM98_13580 IPR023346 Lysozyme-like domain CLM98_13585 IPR013196 Helix-turn-helix, type 11 CLM98_13585 IPR026881 WYL domain CLM98_13585 IPR036388 CLM98_13585 CLM98_13585 IPR036390 CLM98_13585 CLM98_13590 IPR004045 Glutathione S-transferase, N-terminal CLM98_13590 IPR036249 CLM98_13590 CLM98_13590 IPR036282 CLM98_13590 CLM98_13595 IPR002792 TRAM domain CLM98_13595 IPR005839 Methylthiotransferase CLM98_13595 IPR006463 tRNA-i(6)A37 modification enzyme MiaB CLM98_13595 IPR006638 Elongator protein 3/MiaB/NifB CLM98_13595 IPR007197 Radical SAM CLM98_13595 IPR013848 Methylthiotransferase, N-terminal CLM98_13595 IPR020612 Methylthiotransferase, conserved site CLM98_13595 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_13595 IPR038135 CLM98_13595 CLM98_13600 IPR003714 PhoH-like protein CLM98_13600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13610 IPR002036 Endoribonuclease YbeY CLM98_13610 IPR020549 Endoribonuclease YbeY, conserved site CLM98_13610 IPR023091 Metalloprotease catalytic domain, predicted CLM98_13620 IPR000644 CBS domain CLM98_13620 IPR005170 Transporter-associated domain CLM98_13620 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_13620 IPR036318 CLM98_13620 CLM98_13625 IPR025178 Domain of unknown function DUF4105 CLM98_13630 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLM98_13635 IPR015590 Aldehyde dehydrogenase domain CLM98_13635 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_13635 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_13635 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_13635 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_13640 IPR000515 MetI-like domain CLM98_13640 IPR035906 CLM98_13640 CLM98_13645 IPR000515 MetI-like domain CLM98_13645 IPR035906 CLM98_13645 CLM98_13650 IPR003439 ABC transporter-like CLM98_13650 IPR003593 AAA+ ATPase domain CLM98_13650 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLM98_13650 IPR008995 Molybdate/tungstate binding, C-terminal CLM98_13650 IPR013611 Transport-associated OB, type 2 CLM98_13650 IPR017871 ABC transporter, conserved site CLM98_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_13655 IPR003423 Outer membrane efflux protein CLM98_13655 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_13660 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLM98_13660 IPR011701 Major facilitator superfamily CLM98_13660 IPR036259 CLM98_13660 CLM98_13665 IPR003997 RTX secretion protein D, Gram-negative bacteria CLM98_13665 IPR032317 CLM98_13665 CLM98_13665 IPR039562 CLM98_13665 CLM98_13670 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CLM98_13670 IPR006059 Bacterial extracellular solute-binding, family 1 CLM98_13675 IPR005814 Aminotransferase class-III CLM98_13675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_13675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_13675 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_13680 IPR008146 Glutamine synthetase, catalytic domain CLM98_13680 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_13680 IPR027303 Glutamine synthetase, glycine-rich site CLM98_13680 IPR036651 CLM98_13680 CLM98_13685 IPR011697 Peptidase C26 CLM98_13685 IPR029062 Class I glutamine amidotransferase-like CLM98_13690 IPR008146 Glutamine synthetase, catalytic domain CLM98_13690 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLM98_13690 IPR027303 Glutamine synthetase, glycine-rich site CLM98_13690 IPR036651 CLM98_13690 CLM98_13695 IPR006076 FAD dependent oxidoreductase CLM98_13695 IPR036188 CLM98_13695 CLM98_13700 IPR000160 GGDEF domain CLM98_13700 IPR001789 Signal transduction response regulator, receiver domain CLM98_13700 IPR011006 CheY-like superfamily CLM98_13700 IPR029787 Nucleotide cyclase CLM98_13705 IPR012312 Haemerythrin/HHE cation-binding motif CLM98_13705 IPR012827 Haemerythrin-like, metal-binding domain CLM98_13705 IPR016131 Haemerythrin, iron-binding site CLM98_13705 IPR035938 CLM98_13705 CLM98_13710 IPR005828 General substrate transporter CLM98_13710 IPR011701 Major facilitator superfamily CLM98_13710 IPR036259 CLM98_13710 CLM98_13715 IPR036388 CLM98_13715 CLM98_13715 IPR036390 CLM98_13715 CLM98_13720 IPR006656 Molybdopterin oxidoreductase CLM98_13720 IPR006657 Molydopterin dinucleotide-binding domain CLM98_13720 IPR009010 Aspartate decarboxylase-like domain CLM98_13720 IPR010046 Oxidoreductase alpha (molybdopterin) subunit CLM98_13725 IPR003786 Protein FdhD CLM98_13725 IPR016193 Cytidine deaminase-like CLM98_13730 IPR011701 Major facilitator superfamily CLM98_13730 IPR036259 CLM98_13730 CLM98_13745 IPR005814 Aminotransferase class-III CLM98_13745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_13745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_13745 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_13755 IPR007383 Protein of unknown function DUF445 CLM98_13760 IPR000014 PAS domain CLM98_13760 IPR001610 PAC motif CLM98_13760 IPR001789 Signal transduction response regulator, receiver domain CLM98_13760 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_13760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_13760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_13760 IPR006189 CHASE CLM98_13760 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_13760 IPR011006 CheY-like superfamily CLM98_13760 IPR035965 CLM98_13760 CLM98_13760 IPR036097 CLM98_13760 CLM98_13760 IPR036641 CLM98_13760 CLM98_13760 IPR036890 CLM98_13760 CLM98_13765 IPR001789 Signal transduction response regulator, receiver domain CLM98_13765 IPR003607 HD/PDEase domain CLM98_13765 IPR011006 CheY-like superfamily CLM98_13770 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLM98_13770 IPR011701 Major facilitator superfamily CLM98_13770 IPR036259 CLM98_13770 CLM98_13780 IPR007780 Bacterial NAD-glutamate dehydrogenase CLM98_13780 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal CLM98_13780 IPR028971 NAD-glutamate dehydrogenase CLM98_13780 IPR036291 CLM98_13780 CLM98_13785 IPR001647 DNA-binding HTH domain, TetR-type CLM98_13785 IPR009057 Homeodomain-like CLM98_13785 IPR036271 CLM98_13785 CLM98_13790 IPR006143 RND efflux pump, membrane fusion protein CLM98_13790 IPR032317 CLM98_13790 CLM98_13795 IPR001036 Acriflavin resistance protein CLM98_13795 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_13795 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_13800 IPR000843 Transcription regulator HTH, LacI CLM98_13800 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_13800 IPR028082 Periplasmic binding protein-like I CLM98_13805 IPR000032 Phosphocarrier HPr protein-like CLM98_13805 IPR000121 PEP-utilising enzyme, C-terminal CLM98_13805 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLM98_13805 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLM98_13805 IPR002178 PTS EIIA type-2 domain CLM98_13805 IPR006318 Phosphoenolpyruvate-utilising enzyme CLM98_13805 IPR008279 PEP-utilising enzyme, mobile domain CLM98_13805 IPR008731 Phosphotransferase system, enzyme I N-terminal CLM98_13805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_13805 IPR016152 Phosphotransferase/anion transporter CLM98_13805 IPR018274 PEP-utilising enzyme, active site CLM98_13805 IPR023151 PEP-utilising enzyme, conserved site CLM98_13805 IPR035895 CLM98_13805 CLM98_13805 IPR036618 CLM98_13805 CLM98_13805 IPR036637 CLM98_13805 CLM98_13810 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLM98_13810 IPR011611 Carbohydrate kinase PfkB CLM98_13810 IPR017583 Tagatose/fructose phosphokinase CLM98_13810 IPR022463 Fructose 1-phosphate kinase CLM98_13810 IPR029056 Ribokinase-like CLM98_13815 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CLM98_13815 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLM98_13815 IPR006327 Phosphotransferase system, fructose IIC component CLM98_13815 IPR036095 CLM98_13815 CLM98_13820 IPR007049 Carbohydrate-selective porin OprB CLM98_13820 IPR038673 CLM98_13820 CLM98_13830 IPR032871 CLM98_13830 CLM98_13835 IPR012433 Protein of unknown function DUF1629 CLM98_13855 IPR005665 Protein-export membrane protein SecF, bacterial CLM98_13855 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLM98_13855 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLM98_13855 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLM98_13860 IPR005791 Protein translocase subunit SecD CLM98_13860 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLM98_13860 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLM98_13860 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLM98_13860 IPR027398 SecD export protein N-terminal TM domain CLM98_13865 IPR003849 Preprotein translocase YajC CLM98_13870 IPR002616 tRNA-guanine(15) transglycosylase-like CLM98_13870 IPR004803 Queuine tRNA-ribosyltransferase CLM98_13870 IPR036511 CLM98_13870 CLM98_13875 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CLM98_13875 IPR036100 CLM98_13875 CLM98_13880 IPR000485 AsnC-type HTH domain CLM98_13880 IPR011008 Dimeric alpha-beta barrel CLM98_13880 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLM98_13880 IPR019887 Transcription regulator AsnC-type, C-terminal CLM98_13880 IPR019888 Transcription regulator AsnC-type CLM98_13880 IPR036388 CLM98_13880 CLM98_13880 IPR036390 CLM98_13880 CLM98_13885 IPR005814 Aminotransferase class-III CLM98_13885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_13885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_13885 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_13890 IPR007577 Glycosyltransferase, DXD sugar-binding motif CLM98_13890 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_13895 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLM98_13895 IPR008963 Purple acid phosphatase-like, N-terminal CLM98_13895 IPR015914 Purple acid phosphatase, N-terminal CLM98_13895 IPR029052 Metallo-dependent phosphatase-like CLM98_13900 IPR003431 Beta propeller phytase CLM98_13900 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_13905 IPR000531 TonB-dependent receptor, beta-barrel CLM98_13905 IPR010104 Bacterial TonB-dependent receptor CLM98_13905 IPR012910 TonB-dependent receptor, plug CLM98_13905 IPR036942 CLM98_13905 CLM98_13905 IPR037066 CLM98_13905 CLM98_13910 IPR005765 Uracil phosphoribosyl transferase CLM98_13910 IPR029057 Phosphoribosyltransferase-like CLM98_13910 IPR034332 CLM98_13910 CLM98_13915 IPR001701 Glycoside hydrolase, family 9 CLM98_13915 IPR004197 Glycoside hydrolase, family 9, N-terminal, Ig-like CLM98_13915 IPR008928 Six-hairpin glycosidase-like CLM98_13915 IPR012341 Six-hairpin glycosidase CLM98_13915 IPR013783 Immunoglobulin-like fold CLM98_13915 IPR014756 Immunoglobulin E-set CLM98_13915 IPR018221 Glycoside hydrolase, family 9, active site CLM98_13915 IPR033126 CLM98_13915 CLM98_13920 IPR000101 Gamma-glutamyltranspeptidase CLM98_13920 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_13925 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_13925 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_13940 IPR001980 Coenzyme A biosynthesis protein CLM98_13940 IPR004821 Cytidyltransferase-like domain CLM98_13940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_13945 IPR004398 RNA methyltransferase, RsmD CLM98_13945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_13950 IPR001404 Heat shock protein Hsp90 family CLM98_13950 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_13950 IPR019805 Heat shock protein Hsp90, conserved site CLM98_13950 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_13950 IPR020575 Heat shock protein Hsp90, N-terminal CLM98_13950 IPR036890 CLM98_13950 CLM98_13950 IPR037196 CLM98_13950 CLM98_13955 IPR006530 YD repeat CLM98_13955 IPR022385 Rhs repeat-associated core CLM98_13955 IPR025479 Domain of unknown function DUF4329 CLM98_13955 IPR031325 CLM98_13955 CLM98_13965 IPR008928 Six-hairpin glycosidase-like CLM98_13965 IPR012878 Protein of unknown function DUF1680 CLM98_13970 IPR000531 TonB-dependent receptor, beta-barrel CLM98_13970 IPR010916 TonB box, conserved site CLM98_13970 IPR012910 TonB-dependent receptor, plug CLM98_13970 IPR037066 CLM98_13970 CLM98_13975 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_13975 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal CLM98_13975 IPR029058 Alpha/Beta hydrolase fold CLM98_13975 IPR038554 CLM98_13975 CLM98_13980 IPR006710 Glycoside hydrolase, family 43 CLM98_13980 IPR008979 Galactose-binding domain-like CLM98_13980 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_13985 IPR000421 Coagulation factor 5/8 C-terminal type domain CLM98_13985 IPR008928 Six-hairpin glycosidase-like CLM98_13985 IPR008979 Galactose-binding domain-like CLM98_13985 IPR011081 Bacterial Ig-related CLM98_13985 IPR012341 Six-hairpin glycosidase CLM98_13985 IPR013783 Immunoglobulin-like fold CLM98_13995 IPR000531 TonB-dependent receptor, beta-barrel CLM98_13995 IPR012910 TonB-dependent receptor, plug CLM98_13995 IPR037066 CLM98_13995 CLM98_14000 IPR008928 Six-hairpin glycosidase-like CLM98_14000 IPR012341 Six-hairpin glycosidase CLM98_14005 IPR000209 Peptidase S8/S53 domain CLM98_14005 IPR015366 Peptidase S53, propeptide CLM98_14005 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_14005 IPR036852 CLM98_14005 CLM98_14025 IPR017853 Glycoside hydrolase, superfamily CLM98_14025 IPR031330 CLM98_14025 CLM98_14035 IPR002293 Amino acid/polyamine transporter I CLM98_14040 IPR010281 Protein of unknown function DUF885 CLM98_14045 IPR010281 Protein of unknown function DUF885 CLM98_14050 IPR000587 Creatinase, N-terminal CLM98_14050 IPR000994 Peptidase M24, structural domain CLM98_14050 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_14050 IPR036005 CLM98_14050 CLM98_14055 IPR015590 Aldehyde dehydrogenase domain CLM98_14055 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_14055 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_14055 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_14060 IPR002220 DapA-like CLM98_14060 IPR013785 Aldolase-type TIM barrel CLM98_14065 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLM98_14065 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B CLM98_14065 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_14065 IPR036188 CLM98_14065 CLM98_14070 IPR036010 CLM98_14070 CLM98_14075 IPR006076 FAD dependent oxidoreductase CLM98_14075 IPR036188 CLM98_14075 CLM98_14080 IPR008794 Proline racemase family CLM98_14085 IPR009057 Homeodomain-like CLM98_14085 IPR013656 PAS fold-4 CLM98_14085 IPR018060 DNA binding HTH domain, AraC-type CLM98_14085 IPR018062 HTH domain AraC-type, conserved site CLM98_14085 IPR020449 Transcription regulator HTH, AraC- type CLM98_14085 IPR035965 CLM98_14085 CLM98_14090 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLM98_14090 IPR003593 AAA+ ATPase domain CLM98_14090 IPR004390 Signal-recognition particle receptor FtsY CLM98_14090 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CLM98_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14100 IPR000445 Helix-hairpin-helix motif CLM98_14100 IPR003265 HhH-GPD domain CLM98_14100 IPR004035 Endonuclease III, iron-sulphur binding site CLM98_14100 IPR004036 Endonuclease III-like, conserved site-2 CLM98_14100 IPR005760 A/G-specific adenine glycosylase MutY CLM98_14100 IPR011257 DNA glycosylase CLM98_14100 IPR015797 NUDIX hydrolase domain-like CLM98_14100 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLM98_14100 IPR029119 MutY, C-terminal CLM98_14105 IPR007457 Fe(II) trafficking protein YggX CLM98_14105 IPR036766 CLM98_14105 CLM98_14110 IPR000014 PAS domain CLM98_14110 IPR001610 PAC motif CLM98_14110 IPR001789 Signal transduction response regulator, receiver domain CLM98_14110 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_14110 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_14110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_14110 IPR011006 CheY-like superfamily CLM98_14110 IPR035965 CLM98_14110 CLM98_14110 IPR036097 CLM98_14110 CLM98_14110 IPR036890 CLM98_14110 CLM98_14120 IPR019626 Stress-induced protein, KGG, repeat CLM98_14125 IPR000305 GIY-YIG nuclease superfamily CLM98_14125 IPR035901 CLM98_14125 CLM98_14140 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CLM98_14140 IPR002446 Lipocalin, bacterial CLM98_14140 IPR012674 Calycin CLM98_14140 IPR022271 Lipocalin, ApoD type CLM98_14140 IPR022272 Lipocalin family conserved site CLM98_14145 IPR004864 Late embryogenesis abundant protein, LEA-14 CLM98_14155 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLM98_14155 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_14155 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_14155 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_14155 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CLM98_14155 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CLM98_14155 IPR036250 CLM98_14155 CLM98_14155 IPR037069 CLM98_14155 CLM98_14160 IPR003615 HNH nuclease CLM98_14160 IPR029471 HNH endonuclease 5 CLM98_14165 IPR005474 Transketolase, N-terminal CLM98_14165 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_14165 IPR005477 Deoxyxylulose-5-phosphate synthase CLM98_14165 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLM98_14165 IPR020826 Transketolase binding site CLM98_14165 IPR029061 Thiamin diphosphate-binding fold CLM98_14165 IPR033248 CLM98_14165 CLM98_14170 IPR007235 Glycosyl transferase, family 28, C-terminal CLM98_14180 IPR025993 Ceramide glucosyltransferase CLM98_14180 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_14185 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_14185 IPR036291 CLM98_14185 CLM98_14190 IPR001279 Beta-lactamase-like CLM98_14190 IPR036866 CLM98_14190 CLM98_14195 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLM98_14195 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLM98_14195 IPR016039 Thiolase-like CLM98_14200 IPR002816 Pheromone shutdown, TraB CLM98_14205 IPR009327 Protein of unknown function DUF985 CLM98_14205 IPR011051 RmlC-like cupin domain CLM98_14205 IPR014710 RmlC-like jelly roll fold CLM98_14210 IPR004629 Glycosyl transferase WecB/TagA/CpsF CLM98_14215 IPR007345 Polysaccharide pyruvyl transferase CLM98_14235 IPR001296 Glycosyl transferase, family 1 CLM98_14235 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_14240 IPR002656 Acyltransferase 3 CLM98_14245 IPR002656 Acyltransferase 3 CLM98_14255 IPR003362 Bacterial sugar transferase CLM98_14255 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CLM98_14255 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLM98_14260 IPR003856 Lipopolysaccharide biosynthesis CLM98_14260 IPR032807 CLM98_14260 CLM98_14265 IPR003715 Polysaccharide export protein CLM98_14265 IPR019554 Soluble ligand binding domain CLM98_14275 IPR000551 MerR-type HTH domain CLM98_14275 IPR009061 DNA binding domain, putative CLM98_14280 IPR000119 Histone-like bacterial DNA-binding protein CLM98_14280 IPR005684 Integration host factor, alpha subunit CLM98_14280 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLM98_14280 IPR020816 Histone-like DNA-binding protein, conserved site CLM98_14285 IPR002547 tRNA-binding domain CLM98_14285 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CLM98_14285 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding CLM98_14285 IPR005146 B3/B4 tRNA-binding domain CLM98_14285 IPR005147 tRNA synthetase, B5-domain CLM98_14285 IPR009061 DNA binding domain, putative CLM98_14285 IPR012340 Nucleic acid-binding, OB-fold CLM98_14285 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLM98_14285 IPR036690 CLM98_14285 CLM98_14290 IPR002319 Phenylalanyl-tRNA synthetase CLM98_14290 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CLM98_14290 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CLM98_14290 IPR010978 tRNA-binding arm CLM98_14290 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CLM98_14295 IPR005813 Ribosomal protein L20 CLM98_14295 IPR035566 CLM98_14295 CLM98_14300 IPR001706 Ribosomal protein L35, non-mitochondrial CLM98_14300 IPR018265 Ribosomal protein L35, conserved site CLM98_14300 IPR021137 Ribosomal protein L35 CLM98_14300 IPR037229 CLM98_14300 CLM98_14305 IPR001288 Translation initiation factor 3 CLM98_14305 IPR019813 Translation initiation factor 3, conserved site CLM98_14305 IPR019814 Translation initiation factor 3, N-terminal CLM98_14305 IPR019815 Translation initiation factor 3, C-terminal CLM98_14305 IPR036787 CLM98_14305 CLM98_14305 IPR036788 CLM98_14305 CLM98_14310 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLM98_14310 IPR002320 Threonine-tRNA ligase, class IIa CLM98_14310 IPR004095 TGS CLM98_14310 IPR004154 Anticodon-binding CLM98_14310 IPR012675 Beta-grasp domain CLM98_14310 IPR012676 TGS-like CLM98_14310 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLM98_14310 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CLM98_14310 IPR036621 CLM98_14310 CLM98_14315 IPR000843 Transcription regulator HTH, LacI CLM98_14315 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_14315 IPR028082 Periplasmic binding protein-like I CLM98_14320 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_14320 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_14320 IPR017853 Glycoside hydrolase, superfamily CLM98_14325 IPR011701 Major facilitator superfamily CLM98_14325 IPR036259 CLM98_14325 CLM98_14330 IPR008928 Six-hairpin glycosidase-like CLM98_14330 IPR012341 Six-hairpin glycosidase CLM98_14330 IPR032790 CLM98_14330 CLM98_14335 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_14335 IPR013785 Aldolase-type TIM barrel CLM98_14335 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_14335 IPR017853 Glycoside hydrolase, superfamily CLM98_14335 IPR019563 Glycosyl-hydrolase 97, catalytic domain CLM98_14335 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain CLM98_14335 IPR029486 Glycosyl-hydrolase 97, N-terminal domain CLM98_14345 IPR010104 Bacterial TonB-dependent receptor CLM98_14345 IPR010917 TonB-dependent receptor, conserved site CLM98_14345 IPR012910 TonB-dependent receptor, plug CLM98_14345 IPR037066 CLM98_14345 CLM98_14350 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_14350 IPR017853 Glycoside hydrolase, superfamily CLM98_14360 IPR009739 Protein of unknown function DUF1311 CLM98_14365 IPR025240 Domain of unknown function DUF4189 CLM98_14380 IPR002477 Peptidoglycan binding-like CLM98_14380 IPR036365 CLM98_14380 CLM98_14380 IPR036366 CLM98_14380 CLM98_14390 IPR025240 Domain of unknown function DUF4189 CLM98_14395 IPR007688 Conjugal transfer, TrbL/VirB6 CLM98_14405 IPR003593 AAA+ ATPase domain CLM98_14405 IPR004346 CagE, TrbE, VirB component of type IV transporter system CLM98_14405 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CLM98_14405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14410 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CLM98_14415 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CLM98_14420 IPR008258 Lytic transglycosylase-like SLT domain CLM98_14420 IPR023346 Lysozyme-like domain CLM98_14425 IPR001482 Type II secretion system protein E CLM98_14425 IPR014155 Type IV secretion system protein VirB11 CLM98_14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14430 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLM98_14435 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CLM98_14435 IPR038161 CLM98_14435 CLM98_14440 IPR007430 Bacterial virulence protein VirB8 CLM98_14440 IPR032710 CLM98_14440 CLM98_14445 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal CLM98_14450 IPR003688 Ti-type conjugative transfer system, TraG-like CLM98_14450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14470 IPR001650 Helicase, C-terminal CLM98_14470 IPR001943 UVR domain CLM98_14470 IPR004807 UvrABC system, subunit B CLM98_14470 IPR006935 Helicase/UvrB domain CLM98_14470 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_14470 IPR024759 UvrB, YAD/RRR-motif-containing domain CLM98_14470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14470 IPR036876 CLM98_14470 CLM98_14475 IPR012902 Prokaryotic N-terminal methylation site CLM98_14475 IPR022346 General secretion pathway, GspH CLM98_14485 IPR010998 Integrase, Lambda-type, N-terminal CLM98_14485 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_14485 IPR013762 Integrase-like, catalytic core CLM98_14530 IPR012433 Protein of unknown function DUF1629 CLM98_14545 IPR001091 Restriction/modification DNA-methylase CLM98_14545 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_14545 IPR002941 DNA methylase N-4/N-6 CLM98_14545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_14550 IPR019294 Translational regulator Com CLM98_14555 IPR006430 Phage portal protein, PBSX family CLM98_14555 IPR006944 Bacteriophage/Gene transfer agent portal protein CLM98_14555 IPR030935 CLM98_14555 CLM98_14560 IPR004921 Terminase, large subunit CLM98_14560 IPR010332 ATPase terminase subunit, putative CLM98_14560 IPR035421 CLM98_14560 CLM98_14565 IPR009228 Capsid scaffolding protein GpO CLM98_14570 IPR006441 Bacteriophage P2, GpN, major capsid CLM98_14575 IPR010270 Bacteriophage P2, GpM CLM98_14580 IPR009225 Bacteriophage head completion protein GpL CLM98_14585 IPR008861 Bacteriophage P2, GpX CLM98_14585 IPR036779 CLM98_14585 CLM98_14590 IPR032637 CLM98_14590 CLM98_14595 IPR008473 Bacteriophage D3, Orf90 CLM98_14600 IPR023346 Lysozyme-like domain CLM98_14610 IPR009678 Bacteriophage tail completion protein R CLM98_14615 IPR006522 Phage virion morphogensis protein CLM98_14620 IPR036908 CLM98_14620 CLM98_14625 IPR006949 Baseplate assembly protein J-like, predicted CLM98_14625 IPR014507 Baseplate assembly protein J, predicted CLM98_14630 IPR006521 Tail protein I CLM98_14665 IPR012902 Prokaryotic N-terminal methylation site CLM98_14665 IPR031982 CLM98_14665 CLM98_14670 IPR008707 PilC beta-propeller domain CLM98_14670 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_14675 IPR025205 PilX/PilW C-terminal domain CLM98_14675 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain CLM98_14680 IPR012902 Prokaryotic N-terminal methylation site CLM98_14680 IPR032092 CLM98_14680 CLM98_14685 IPR012902 Prokaryotic N-terminal methylation site CLM98_14685 IPR013362 Pilus modification type IV, PilV CLM98_14690 IPR012902 Prokaryotic N-terminal methylation site CLM98_14690 IPR022346 General secretion pathway, GspH CLM98_14695 IPR010559 Signal transduction histidine kinase, internal region CLM98_14695 IPR036890 CLM98_14695 CLM98_14700 IPR021826 Protein of unknown function DUF3412 CLM98_14700 IPR027820 Domain of unknown function DUF4478 CLM98_14700 IPR031100 CLM98_14700 CLM98_14700 IPR037153 CLM98_14700 CLM98_14705 IPR008969 Carboxypeptidase-like, regulatory domain CLM98_14705 IPR012910 TonB-dependent receptor, plug CLM98_14705 IPR036942 CLM98_14705 CLM98_14715 IPR002771 Multiple antibiotic resistance (MarC)-related CLM98_14720 IPR002347 Glucose/ribitol dehydrogenase CLM98_14720 IPR036291 CLM98_14720 CLM98_14725 IPR002109 Glutaredoxin CLM98_14725 IPR004480 Monothiol glutaredoxin-related CLM98_14725 IPR014434 Monothiol glutaredoxin CLM98_14725 IPR036249 CLM98_14725 CLM98_14730 IPR001189 Manganese/iron superoxide dismutase CLM98_14730 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLM98_14730 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLM98_14730 IPR019833 Manganese/iron superoxide dismutase, binding site CLM98_14730 IPR036314 CLM98_14730 CLM98_14730 IPR036324 CLM98_14730 CLM98_14735 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLM98_14735 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CLM98_14735 IPR011054 Rudiment single hybrid motif CLM98_14735 IPR013815 ATP-grasp fold, subdomain 1 CLM98_14735 IPR016185 Pre-ATP-grasp domain CLM98_14740 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain CLM98_14740 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE CLM98_14740 IPR033747 CLM98_14740 CLM98_14740 IPR035893 CLM98_14740 CLM98_14745 IPR005651 Uncharacterised protein family UPF0434/Trm112 CLM98_14750 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLM98_14750 IPR004393 Nicotinate-nucleotide pyrophosphorylase CLM98_14750 IPR013785 Aldolase-type TIM barrel CLM98_14750 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CLM98_14750 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLM98_14750 IPR036068 CLM98_14750 CLM98_14750 IPR037128 CLM98_14750 CLM98_14755 IPR014545 Uncharacterised conserved protein UCP028415 CLM98_14755 IPR019262 Domain of unknown function DUF2272 CLM98_14760 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLM98_14760 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_14760 IPR004087 K Homology domain CLM98_14760 IPR004088 K Homology domain, type 1 CLM98_14760 IPR012162 Polyribonucleotide nucleotidyltransferase CLM98_14760 IPR012340 Nucleic acid-binding, OB-fold CLM98_14760 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLM98_14760 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CLM98_14760 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_14760 IPR022967 RNA-binding domain, S1 CLM98_14760 IPR027408 PNPase/RNase PH domain CLM98_14760 IPR036345 CLM98_14760 CLM98_14760 IPR036456 CLM98_14760 CLM98_14760 IPR036612 CLM98_14760 CLM98_14765 IPR000589 Ribosomal protein S15 CLM98_14765 IPR005290 Ribosomal protein S15, bacterial-type CLM98_14765 IPR009068 S15/NS1, RNA-binding CLM98_14770 IPR002501 Pseudouridine synthase II CLM98_14770 IPR014780 tRNA pseudouridine synthase II, TruB CLM98_14770 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CLM98_14770 IPR015947 PUA-like domain CLM98_14770 IPR020103 Pseudouridine synthase, catalytic domain CLM98_14770 IPR032819 CLM98_14770 CLM98_14775 IPR000238 Ribosome-binding factor A CLM98_14775 IPR015946 K homology domain-like, alpha/beta CLM98_14775 IPR020053 Ribosome-binding factor A, conserved site CLM98_14775 IPR023799 Ribosome-binding factor A domain CLM98_14780 IPR000178 Translation initiation factor aIF-2, bacterial-like CLM98_14780 IPR000795 Elongation factor, GTP-binding domain CLM98_14780 IPR005225 Small GTP-binding protein domain CLM98_14780 IPR006847 Translation initiation factor IF-2, N-terminal CLM98_14780 IPR009000 Translation protein, beta-barrel domain CLM98_14780 IPR009061 DNA binding domain, putative CLM98_14780 IPR013575 Initiation factor 2 associated domain, bacterial CLM98_14780 IPR023115 Translation initiation factor IF- 2, domain 3 CLM98_14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_14780 IPR036925 CLM98_14780 CLM98_14785 IPR003029 Ribosomal protein S1, RNA-binding domain CLM98_14785 IPR004087 K Homology domain CLM98_14785 IPR009019 K homology domain, prokaryotic type CLM98_14785 IPR010213 Transcription termination factor NusA CLM98_14785 IPR010214 Transcription termination factor NusA, C-terminal duplication CLM98_14785 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CLM98_14785 IPR012340 Nucleic acid-binding, OB-fold CLM98_14785 IPR013735 Transcription factor NusA, N-terminal CLM98_14785 IPR015946 K homology domain-like, alpha/beta CLM98_14785 IPR022967 RNA-binding domain, S1 CLM98_14785 IPR025249 KH domain, NusA-like CLM98_14785 IPR030842 CLM98_14785 CLM98_14785 IPR036555 CLM98_14785 CLM98_14790 IPR003728 Ribosome maturation factor RimP CLM98_14790 IPR028989 Ribosome maturation factor RimP, N-terminal CLM98_14790 IPR028998 Ribosome maturation factor RimP, C-terminal CLM98_14790 IPR035956 CLM98_14790 CLM98_14790 IPR036847 CLM98_14790 CLM98_14800 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_14800 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CLM98_14805 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_14805 IPR003918 NADH:ubiquinone oxidoreductase CLM98_14805 IPR010227 NADH-quinone oxidoreductase, chain M/4 CLM98_14810 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CLM98_14810 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CLM98_14810 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CLM98_14810 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CLM98_14815 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CLM98_14815 IPR039428 CLM98_14815 CLM98_14820 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CLM98_14825 IPR010226 NADH-quinone oxidoreductase, chain I CLM98_14825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLM98_14825 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLM98_14830 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CLM98_14830 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CLM98_14835 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CLM98_14835 IPR006656 Molybdopterin oxidoreductase CLM98_14835 IPR006657 Molydopterin dinucleotide-binding domain CLM98_14835 IPR009010 Aspartate decarboxylase-like domain CLM98_14835 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CLM98_14835 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CLM98_14835 IPR036010 CLM98_14835 CLM98_14840 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CLM98_14840 IPR011537 NADH ubiquinone oxidoreductase, F subunit CLM98_14840 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLM98_14840 IPR019554 Soluble ligand binding domain CLM98_14840 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CLM98_14840 IPR037207 CLM98_14840 CLM98_14840 IPR037225 CLM98_14840 CLM98_14845 IPR002023 NADH-quinone oxidoreductase subunit E-like CLM98_14845 IPR036249 CLM98_14845 CLM98_14850 IPR001135 NADH-quinone oxidoreductase, subunit D CLM98_14850 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CLM98_14850 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CLM98_14850 IPR029014 NiFe hydrogenase-like CLM98_14850 IPR038290 CLM98_14850 CLM98_14855 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CLM98_14855 IPR010218 NADH dehydrogenase, subunit C CLM98_14855 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CLM98_14855 IPR037232 CLM98_14855 CLM98_14860 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CLM98_14860 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CLM98_14865 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CLM98_14865 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CLM98_14865 IPR038430 CLM98_14865 CLM98_14875 IPR004692 Preprotein translocase SecG subunit CLM98_14880 IPR000652 Triosephosphate isomerase CLM98_14880 IPR013785 Aldolase-type TIM barrel CLM98_14880 IPR020861 Triosephosphate isomerase, active site CLM98_14880 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CLM98_14880 IPR035990 CLM98_14880 CLM98_14885 IPR002347 Glucose/ribitol dehydrogenase CLM98_14885 IPR036291 CLM98_14885 CLM98_14890 IPR001486 Globin, truncated bacterial-like CLM98_14890 IPR009050 Globin-like CLM98_14890 IPR012292 Globin, structural domain CLM98_14890 IPR016339 Globin, truncated bacterial-like, HbN/cyanoglobin CLM98_14895 IPR021393 Protein of unknown function DUF3034 CLM98_14900 IPR000160 GGDEF domain CLM98_14900 IPR001633 EAL domain CLM98_14900 IPR003660 HAMP linker domain CLM98_14900 IPR029150 Sensory domain of two-component sensor kinase CLM98_14900 IPR029787 Nucleotide cyclase CLM98_14900 IPR035919 CLM98_14900 CLM98_14905 IPR008969 Carboxypeptidase-like, regulatory domain CLM98_14905 IPR008972 Cupredoxin CLM98_14910 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_14910 IPR026992 Non-haem dioxygenase N-terminal domain CLM98_14910 IPR027443 Isopenicillin N synthase-like CLM98_14915 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_14915 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_14915 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_14915 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_14915 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_14915 IPR006352 Phosphoglucosamine mutase CLM98_14915 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_14915 IPR016066 Alpha-D-phosphohexomutase, conserved site CLM98_14915 IPR036900 CLM98_14915 CLM98_14920 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CLM98_14920 IPR029045 ClpP/crotonase-like domain CLM98_14920 IPR034733 CLM98_14920 CLM98_14925 IPR002028 Tryptophan synthase, alpha chain CLM98_14925 IPR011060 Ribulose-phosphate binding barrel CLM98_14925 IPR013785 Aldolase-type TIM barrel CLM98_14925 IPR018204 Tryptophan synthase, alpha chain, active site CLM98_14935 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_14935 IPR006653 Tryptophan synthase, beta chain, conserved site CLM98_14935 IPR006654 Tryptophan synthase, beta chain CLM98_14935 IPR023026 Tryptophan synthase beta chain/beta chain-like CLM98_14935 IPR036052 CLM98_14935 CLM98_14940 IPR000847 Transcription regulator HTH, LysR CLM98_14940 IPR005119 LysR, substrate-binding CLM98_14940 IPR036388 CLM98_14940 CLM98_14940 IPR036390 CLM98_14940 CLM98_14945 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain CLM98_14945 IPR011060 Ribulose-phosphate binding barrel CLM98_14945 IPR013785 Aldolase-type TIM barrel CLM98_14950 IPR001406 Pseudouridine synthase I, TruA CLM98_14950 IPR020095 Pseudouridine synthase I, TruA, C-terminal CLM98_14950 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CLM98_14950 IPR020103 Pseudouridine synthase, catalytic domain CLM98_14955 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_14955 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_14960 IPR020011 Motility protein FimV, C-terminal CLM98_14960 IPR020012 Motility protein FimV, N-terminal CLM98_14960 IPR038440 CLM98_14960 CLM98_14970 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLM98_14970 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CLM98_14970 IPR012080 Aspartate-semialdehyde dehydrogenase CLM98_14970 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CLM98_14970 IPR036291 CLM98_14970 CLM98_14975 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLM98_14975 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLM98_14975 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLM98_14975 IPR036291 CLM98_14975 CLM98_14980 IPR000453 Chorismate synthase CLM98_14980 IPR020541 Chorismate synthase, conserved site CLM98_14980 IPR035904 CLM98_14980 CLM98_14985 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_14985 IPR004556 Modification methylase HemK CLM98_14985 IPR007848 Methyltransferase small domain CLM98_14985 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CLM98_14985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_14990 IPR003782 Copper chaperone SCO1/SenC CLM98_14990 IPR036249 CLM98_14990 CLM98_14995 IPR003817 Phosphatidylserine decarboxylase-related CLM98_14995 IPR033177 CLM98_14995 CLM98_14995 IPR033178 CLM98_14995 CLM98_15000 IPR008258 Lytic transglycosylase-like SLT domain CLM98_15000 IPR018392 LysM domain CLM98_15000 IPR023346 Lysozyme-like domain CLM98_15000 IPR036779 CLM98_15000 CLM98_15010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15010 IPR033186 CLM98_15010 CLM98_15015 IPR000086 NUDIX hydrolase domain CLM98_15015 IPR004385 Nucleoside diphosphate pyrophosphatase CLM98_15015 IPR015797 NUDIX hydrolase domain-like CLM98_15030 IPR011990 Tetratricopeptide-like helical domain CLM98_15030 IPR022764 Peptidase S54, rhomboid domain CLM98_15030 IPR035952 CLM98_15030 CLM98_15035 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLM98_15035 IPR006358 Transcription elongation factor GreB CLM98_15035 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLM98_15035 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLM98_15035 IPR023459 Transcription elongation factor GreA/GreB family CLM98_15035 IPR028624 Transcription elongation factor GreA/GreB CLM98_15035 IPR036805 CLM98_15035 CLM98_15035 IPR036953 CLM98_15035 CLM98_15040 IPR005839 Methylthiotransferase CLM98_15040 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CLM98_15040 IPR006638 Elongator protein 3/MiaB/NifB CLM98_15040 IPR007197 Radical SAM CLM98_15040 IPR013848 Methylthiotransferase, N-terminal CLM98_15040 IPR020612 Methylthiotransferase, conserved site CLM98_15040 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_15040 IPR038135 CLM98_15040 CLM98_15045 IPR002925 Dienelactone hydrolase CLM98_15045 IPR029058 Alpha/Beta hydrolase fold CLM98_15050 IPR001310 Histidine triad (HIT) protein CLM98_15050 IPR026026 Histidine triad hydrolase, Hint-type CLM98_15050 IPR036265 CLM98_15050 CLM98_15065 IPR011962 Deoxycytidine triphosphate deaminase CLM98_15065 IPR029054 dUTPase-like CLM98_15065 IPR036157 CLM98_15065 CLM98_15075 IPR000808 Mrp, conserved site CLM98_15075 IPR019591 Mrp/NBP35 ATP-binding protein CLM98_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15075 IPR033756 CLM98_15075 CLM98_15080 IPR000531 TonB-dependent receptor, beta-barrel CLM98_15080 IPR010917 TonB-dependent receptor, conserved site CLM98_15080 IPR012910 TonB-dependent receptor, plug CLM98_15080 IPR037066 CLM98_15080 CLM98_15085 IPR000531 TonB-dependent receptor, beta-barrel CLM98_15085 IPR012910 TonB-dependent receptor, plug CLM98_15085 IPR013784 Carbohydrate-binding-like fold CLM98_15085 IPR037066 CLM98_15085 CLM98_15090 IPR002937 Amine oxidase CLM98_15090 IPR036188 CLM98_15090 CLM98_15095 IPR008753 Peptidase M13, N-terminal domain CLM98_15095 IPR018497 Peptidase M13, C-terminal domain CLM98_15095 IPR024079 Metallopeptidase, catalytic domain CLM98_15105 IPR008753 Peptidase M13, N-terminal domain CLM98_15105 IPR018497 Peptidase M13, C-terminal domain CLM98_15105 IPR024079 Metallopeptidase, catalytic domain CLM98_15110 IPR008753 Peptidase M13, N-terminal domain CLM98_15110 IPR018497 Peptidase M13, C-terminal domain CLM98_15110 IPR024079 Metallopeptidase, catalytic domain CLM98_15115 IPR022764 Peptidase S54, rhomboid domain CLM98_15115 IPR035952 CLM98_15115 CLM98_15120 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLM98_15120 IPR036217 CLM98_15120 CLM98_15120 IPR036388 CLM98_15120 CLM98_15125 IPR001100 CLM98_15125 CLM98_15125 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_15125 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_15125 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLM98_15125 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_15125 IPR036188 CLM98_15125 CLM98_15130 IPR006076 FAD dependent oxidoreductase CLM98_15130 IPR036188 CLM98_15130 CLM98_15135 IPR007349 Domain of unknown function DUF418 CLM98_15140 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLM98_15145 IPR000064 Endopeptidase, NLPC/P60 domain CLM98_15145 IPR038765 CLM98_15145 CLM98_15150 IPR000064 Endopeptidase, NLPC/P60 domain CLM98_15150 IPR038765 CLM98_15150 CLM98_15155 IPR006683 Thioesterase superfamily CLM98_15155 IPR029069 HotDog domain CLM98_15160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_15165 IPR001991 Sodium:dicarboxylate symporter CLM98_15165 IPR036458 CLM98_15165 CLM98_15170 IPR001952 Alkaline phosphatase CLM98_15170 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLM98_15170 IPR017850 Alkaline-phosphatase-like, core domain CLM98_15180 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLM98_15180 IPR012094 Lysidine-tRNA(Ile) synthetase CLM98_15180 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal CLM98_15180 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CLM98_15180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15180 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain CLM98_15185 IPR003761 Exonuclease VII, small subunit CLM98_15185 IPR037004 CLM98_15185 CLM98_15190 IPR000092 Polyprenyl synthetase CLM98_15190 IPR008949 Terpenoid synthase CLM98_15190 IPR033749 CLM98_15190 CLM98_15195 IPR024079 Metallopeptidase, catalytic domain CLM98_15195 IPR029463 Lysine-specific metallo-endopeptidase CLM98_15200 IPR019109 Protein of unknown function DUF4870 CLM98_15205 IPR002510 TldD/PmbA CLM98_15205 IPR035068 CLM98_15205 CLM98_15205 IPR036059 CLM98_15205 CLM98_15210 IPR006839 Ribosome-associated, YjgA CLM98_15210 IPR023153 PSPTO4464-like domain CLM98_15215 IPR002510 TldD/PmbA CLM98_15215 IPR025502 TldD CLM98_15215 IPR035068 CLM98_15215 CLM98_15215 IPR036059 CLM98_15215 CLM98_15225 IPR011836 Conserved hypothetical protein CHP02099 CLM98_15225 IPR025263 Domain of unknown function DUF3971 CLM98_15225 IPR032712 CLM98_15225 CLM98_15230 IPR004659 Ribonuclease E/G CLM98_15230 IPR012340 Nucleic acid-binding, OB-fold CLM98_15230 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLM98_15230 IPR022967 RNA-binding domain, S1 CLM98_15235 IPR003697 Maf-like protein CLM98_15235 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_15240 IPR007497 Protein of unknown function DUF541 CLM98_15245 IPR000531 TonB-dependent receptor, beta-barrel CLM98_15245 IPR012910 TonB-dependent receptor, plug CLM98_15245 IPR013784 Carbohydrate-binding-like fold CLM98_15245 IPR037066 CLM98_15245 CLM98_15250 IPR006260 TonB, C-terminal CLM98_15250 IPR037682 CLM98_15250 CLM98_15255 IPR003742 SPOUT methyltransferase, predicted CLM98_15255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_15255 IPR029028 Alpha/beta knot methyltransferases CLM98_15260 IPR008557 Protein of unknown function DUF839 CLM98_15260 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_15265 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CLM98_15270 IPR004821 Cytidyltransferase-like domain CLM98_15270 IPR005248 Probable nicotinate-nucleotide adenylyltransferase CLM98_15270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15275 IPR005790 DNA polymerase III, delta subunit CLM98_15275 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLM98_15275 IPR010372 DNA polymerase III, delta CLM98_15275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15280 IPR007485 Lipopolysaccharide assembly, LptE CLM98_15285 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_15285 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_15285 IPR002302 Leucine-tRNA ligase CLM98_15285 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_15285 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_15285 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_15285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15285 IPR025709 Leucyl-tRNA synthetase, editing domain CLM98_15290 IPR009339 Protein of unknown function DUF998 CLM98_15295 IPR005746 Thioredoxin CLM98_15295 IPR011990 Tetratricopeptide-like helical domain CLM98_15295 IPR013766 Thioredoxin domain CLM98_15295 IPR017937 Thioredoxin, conserved site CLM98_15295 IPR036249 CLM98_15295 CLM98_15305 IPR027961 Protein of unknown function DUF4442 CLM98_15305 IPR029069 HotDog domain CLM98_15320 IPR007211 Protein of unknown function DUF378 CLM98_15325 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLM98_15325 IPR029000 Cyclophilin-like domain CLM98_15330 IPR000620 Drug/metabolite transporter CLM98_15335 IPR000847 Transcription regulator HTH, LysR CLM98_15335 IPR005119 LysR, substrate-binding CLM98_15335 IPR036388 CLM98_15335 CLM98_15335 IPR036390 CLM98_15335 CLM98_15350 IPR025645 Domain of unknown function DUF4349 CLM98_15355 IPR011057 Mss4-like CLM98_15360 IPR010281 Protein of unknown function DUF885 CLM98_15365 IPR003439 ABC transporter-like CLM98_15365 IPR003593 AAA+ ATPase domain CLM98_15365 IPR011527 ABC transporter type 1, transmembrane domain CLM98_15365 IPR017871 ABC transporter, conserved site CLM98_15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15365 IPR036640 CLM98_15365 CLM98_15370 IPR012912 Plasmid pRiA4b, Orf3 CLM98_15370 IPR024047 Protein MM3350-like domain CLM98_15380 IPR001036 Acriflavin resistance protein CLM98_15380 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_15385 IPR006143 RND efflux pump, membrane fusion protein CLM98_15385 IPR032317 CLM98_15385 CLM98_15390 IPR010583 MltA-interacting MipA CLM98_15395 IPR003423 Outer membrane efflux protein CLM98_15395 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_15400 IPR001789 Signal transduction response regulator, receiver domain CLM98_15400 IPR001867 Signal transduction response regulator, C-terminal CLM98_15400 IPR011006 CheY-like superfamily CLM98_15400 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_15400 IPR036388 CLM98_15400 CLM98_15405 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_15405 IPR003660 HAMP linker domain CLM98_15405 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_15405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15405 IPR036097 CLM98_15405 CLM98_15405 IPR036890 CLM98_15405 CLM98_15410 IPR006153 Cation/H+ exchanger CLM98_15410 IPR038770 CLM98_15410 CLM98_15415 IPR001466 Beta-lactamase-related CLM98_15415 IPR012338 Beta-lactamase/transpeptidase-like CLM98_15415 IPR021860 Peptidase S12, Pab87-related, C-terminal CLM98_15420 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CLM98_15420 IPR010203 Regulator of ribonuclease activity A CLM98_15420 IPR036704 CLM98_15420 CLM98_15430 IPR002763 Protein of unknown function DUF72 CLM98_15430 IPR036520 CLM98_15430 CLM98_15435 IPR000620 Drug/metabolite transporter CLM98_15440 IPR000160 GGDEF domain CLM98_15440 IPR003018 GAF domain CLM98_15440 IPR029016 GAF domain-like CLM98_15440 IPR029787 Nucleotide cyclase CLM98_15445 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_15445 IPR002942 RNA-binding S4 domain CLM98_15445 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_15445 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_15445 IPR020103 Pseudouridine synthase, catalytic domain CLM98_15445 IPR036986 CLM98_15445 CLM98_15450 IPR000014 PAS domain CLM98_15450 IPR000160 GGDEF domain CLM98_15450 IPR001610 PAC motif CLM98_15450 IPR001633 EAL domain CLM98_15450 IPR013655 PAS fold-3 CLM98_15450 IPR029787 Nucleotide cyclase CLM98_15450 IPR035919 CLM98_15450 CLM98_15450 IPR035965 CLM98_15450 CLM98_15455 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLM98_15455 IPR001650 Helicase, C-terminal CLM98_15455 IPR005580 DbpA, RNA-binding CLM98_15455 IPR011545 DEAD/DEAH box helicase domain CLM98_15455 IPR012677 Nucleotide-binding, alpha-beta plait CLM98_15455 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_15455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15455 IPR028618 ATP-dependent RNA helicase DeaD CLM98_15460 IPR007627 RNA polymerase sigma-70 region 2 CLM98_15460 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_15460 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_15460 IPR013325 RNA polymerase sigma factor, region 2 CLM98_15460 IPR014284 RNA polymerase sigma-70 like domain CLM98_15460 IPR036388 CLM98_15460 CLM98_15470 IPR036986 CLM98_15470 CLM98_15480 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CLM98_15480 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CLM98_15485 IPR025091 Protein of unknown function DUF4019 CLM98_15495 IPR029045 ClpP/crotonase-like domain CLM98_15500 IPR003265 HhH-GPD domain CLM98_15500 IPR004026 Ada DNA repair, metal-binding CLM98_15500 IPR009057 Homeodomain-like CLM98_15500 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CLM98_15500 IPR011257 DNA glycosylase CLM98_15500 IPR018060 DNA binding HTH domain, AraC-type CLM98_15500 IPR018062 HTH domain AraC-type, conserved site CLM98_15500 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLM98_15500 IPR035451 CLM98_15500 CLM98_15500 IPR037046 CLM98_15500 CLM98_15505 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLM98_15505 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLM98_15505 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLM98_15505 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CLM98_15505 IPR036217 CLM98_15505 CLM98_15505 IPR036388 CLM98_15505 CLM98_15505 IPR036631 CLM98_15505 CLM98_15510 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase CLM98_15510 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLM98_15510 IPR017850 Alkaline-phosphatase-like, core domain CLM98_15515 IPR001807 Chloride channel, voltage gated CLM98_15515 IPR014743 Chloride channel, core CLM98_15520 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_15520 IPR011032 GroES (chaperonin 10)-like CLM98_15520 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_15520 IPR013154 Alcohol dehydrogenase GroES-like CLM98_15520 IPR020843 Polyketide synthase, enoylreductase CLM98_15520 IPR036291 CLM98_15520 CLM98_15525 IPR030826 CLM98_15525 CLM98_15535 IPR004891 MerC mercury resistance protein CLM98_15540 IPR000531 TonB-dependent receptor, beta-barrel CLM98_15540 IPR012910 TonB-dependent receptor, plug CLM98_15540 IPR036942 CLM98_15540 CLM98_15540 IPR037066 CLM98_15540 CLM98_15545 IPR000531 TonB-dependent receptor, beta-barrel CLM98_15545 IPR012910 TonB-dependent receptor, plug CLM98_15545 IPR036942 CLM98_15545 CLM98_15545 IPR037066 CLM98_15545 CLM98_15550 IPR000209 Peptidase S8/S53 domain CLM98_15550 IPR002884 Proprotein convertase, P CLM98_15550 IPR008979 Galactose-binding domain-like CLM98_15550 IPR015500 Peptidase S8, subtilisin-related CLM98_15550 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_15550 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_15550 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_15550 IPR036852 CLM98_15550 CLM98_15560 IPR000209 Peptidase S8/S53 domain CLM98_15560 IPR002884 Proprotein convertase, P CLM98_15560 IPR008979 Galactose-binding domain-like CLM98_15560 IPR015500 Peptidase S8, subtilisin-related CLM98_15560 IPR022398 Peptidase S8, subtilisin, His-active site CLM98_15560 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_15560 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_15560 IPR036852 CLM98_15560 CLM98_15570 IPR020471 Aldo/keto reductase subgroup CLM98_15570 IPR023210 NADP-dependent oxidoreductase domain CLM98_15570 IPR036812 CLM98_15570 CLM98_15580 IPR011701 Major facilitator superfamily CLM98_15580 IPR036259 CLM98_15580 CLM98_15585 IPR000847 Transcription regulator HTH, LysR CLM98_15585 IPR005119 LysR, substrate-binding CLM98_15585 IPR036388 CLM98_15585 CLM98_15585 IPR036390 CLM98_15585 CLM98_15595 IPR009057 Homeodomain-like CLM98_15595 IPR009594 Transcription regulator HTH, AraC, N-terminal CLM98_15595 IPR018060 DNA binding HTH domain, AraC-type CLM98_15600 IPR011051 RmlC-like cupin domain CLM98_15600 IPR013096 Cupin 2, conserved barrel CLM98_15600 IPR014710 RmlC-like jelly roll fold CLM98_15605 IPR001647 DNA-binding HTH domain, TetR-type CLM98_15605 IPR009057 Homeodomain-like CLM98_15605 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_15605 IPR036271 CLM98_15605 CLM98_15610 IPR003423 Outer membrane efflux protein CLM98_15610 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLM98_15615 IPR001036 Acriflavin resistance protein CLM98_15615 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLM98_15615 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_15620 IPR006143 RND efflux pump, membrane fusion protein CLM98_15620 IPR032317 CLM98_15620 CLM98_15625 IPR001647 DNA-binding HTH domain, TetR-type CLM98_15625 IPR009057 Homeodomain-like CLM98_15625 IPR039536 CLM98_15625 CLM98_15630 IPR002481 Ferric-uptake regulator CLM98_15630 IPR036388 CLM98_15630 CLM98_15630 IPR036390 CLM98_15630 CLM98_15635 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLM98_15635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_15635 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CLM98_15635 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CLM98_15635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_15635 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLM98_15635 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CLM98_15640 IPR022060 Protein of unknown function DUF3616 CLM98_15645 IPR003010 Carbon-nitrogen hydrolase CLM98_15645 IPR036526 CLM98_15645 CLM98_15650 IPR016181 Acyl-CoA N-acyltransferase CLM98_15660 IPR010364 Uncharacterised protein family, inner membrane CreD CLM98_15665 IPR000668 Peptidase C1A, papain C-terminal CLM98_15665 IPR038765 CLM98_15665 CLM98_15670 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_15670 IPR003660 HAMP linker domain CLM98_15670 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_15670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15670 IPR029151 Periplasmic sensor domain-like CLM98_15670 IPR036097 CLM98_15670 CLM98_15670 IPR036890 CLM98_15670 CLM98_15675 IPR001789 Signal transduction response regulator, receiver domain CLM98_15675 IPR001867 Signal transduction response regulator, C-terminal CLM98_15675 IPR011006 CheY-like superfamily CLM98_15675 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_15675 IPR036388 CLM98_15675 CLM98_15680 IPR007473 Ribosomal RNA large subunit methyltransferase J CLM98_15680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_15685 IPR000182 GNAT domain CLM98_15685 IPR016181 Acyl-CoA N-acyltransferase CLM98_15690 IPR001650 Helicase, C-terminal CLM98_15690 IPR003711 CarD-like/TRCF domain CLM98_15690 IPR004576 Transcription-repair coupling factor CLM98_15690 IPR005118 Transcription-repair-coupling factor, C-terminal domain CLM98_15690 IPR011545 DEAD/DEAH box helicase domain CLM98_15690 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_15690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15690 IPR036101 CLM98_15690 CLM98_15690 IPR037235 CLM98_15690 CLM98_15705 IPR032871 CLM98_15705 CLM98_15710 IPR012433 Protein of unknown function DUF1629 CLM98_15715 IPR014944 Toxin SymE-like CLM98_15725 IPR002645 STAS domain CLM98_15725 IPR036513 CLM98_15725 CLM98_15730 IPR002545 CheW-like protein CLM98_15730 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_15730 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_15730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_15730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_15730 IPR036061 CLM98_15730 CLM98_15730 IPR036097 CLM98_15730 CLM98_15730 IPR036641 CLM98_15730 CLM98_15730 IPR036890 CLM98_15730 CLM98_15730 IPR037006 CLM98_15730 CLM98_15735 IPR003660 HAMP linker domain CLM98_15735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_15740 IPR002545 CheW-like protein CLM98_15740 IPR036061 CLM98_15740 CLM98_15745 IPR001633 EAL domain CLM98_15745 IPR001789 Signal transduction response regulator, receiver domain CLM98_15745 IPR011006 CheY-like superfamily CLM98_15745 IPR035919 CLM98_15745 CLM98_15750 IPR000780 MCP methyltransferase, CheR-type CLM98_15750 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CLM98_15750 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_15750 IPR026024 Chemotaxis protein methyltransferase CheR CLM98_15750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_15750 IPR036804 CLM98_15750 CLM98_15755 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_15755 IPR001789 Signal transduction response regulator, receiver domain CLM98_15755 IPR008248 Signal transduction response regulator, chemotaxis, CheB CLM98_15755 IPR011006 CheY-like superfamily CLM98_15755 IPR035909 CLM98_15755 CLM98_15760 IPR001736 Phospholipase D/Transphosphatidylase CLM98_15760 IPR025202 Phospholipase D-like domain CLM98_15765 IPR008753 Peptidase M13, N-terminal domain CLM98_15765 IPR018497 Peptidase M13, C-terminal domain CLM98_15765 IPR024079 Metallopeptidase, catalytic domain CLM98_15775 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLM98_15775 IPR005952 Phosphoglycerate mutase 1 CLM98_15775 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_15775 IPR029033 Histidine phosphatase superfamily CLM98_15780 IPR007581 Endonuclease V CLM98_15790 IPR003829 Pirin, N-terminal domain CLM98_15790 IPR008778 Pirin, C-terminal domain CLM98_15790 IPR011051 RmlC-like cupin domain CLM98_15790 IPR012093 Pirin CLM98_15790 IPR014710 RmlC-like jelly roll fold CLM98_15800 IPR003718 OsmC/Ohr family CLM98_15800 IPR015946 K homology domain-like, alpha/beta CLM98_15800 IPR036102 CLM98_15800 CLM98_15805 IPR003829 Pirin, N-terminal domain CLM98_15805 IPR008778 Pirin, C-terminal domain CLM98_15805 IPR011051 RmlC-like cupin domain CLM98_15805 IPR012093 Pirin CLM98_15805 IPR014710 RmlC-like jelly roll fold CLM98_15810 IPR003706 Carbon starvation protein CstA CLM98_15810 IPR025299 CstA C-terminal domain CLM98_15815 IPR007423 Protein of unknown function DUF466 CLM98_15830 IPR006439 HAD hydrolase, subfamily IA CLM98_15830 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_15830 IPR023214 HAD-like domain CLM98_15830 IPR036412 CLM98_15830 CLM98_15835 IPR002110 Ankyrin repeat CLM98_15835 IPR020683 Ankyrin repeat-containing domain CLM98_15835 IPR036770 CLM98_15835 CLM98_15840 IPR024499 Protein of unknown function DUF2974 CLM98_15840 IPR029058 Alpha/Beta hydrolase fold CLM98_15845 IPR008537 Protein of unknown function DUF819 CLM98_15860 IPR025877 MobA-like NTP transferase domain CLM98_15860 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_15875 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLM98_15875 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLM98_15875 IPR036856 CLM98_15875 CLM98_15875 IPR037165 CLM98_15875 CLM98_15880 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLM98_15880 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLM98_15880 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_15880 IPR036318 CLM98_15880 CLM98_15880 IPR036683 CLM98_15880 CLM98_15885 IPR001041 2Fe-2S ferredoxin-type domain CLM98_15885 IPR002888 [2Fe-2S]-binding CLM98_15885 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLM98_15885 IPR012675 Beta-grasp domain CLM98_15885 IPR036010 CLM98_15885 CLM98_15885 IPR036884 CLM98_15885 CLM98_15890 IPR011032 GroES (chaperonin 10)-like CLM98_15890 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_15890 IPR013154 Alcohol dehydrogenase GroES-like CLM98_15890 IPR020843 Polyketide synthase, enoylreductase CLM98_15890 IPR036291 CLM98_15890 CLM98_15895 IPR000160 GGDEF domain CLM98_15895 IPR029787 Nucleotide cyclase CLM98_15895 IPR033479 CLM98_15895 CLM98_15900 IPR006935 Helicase/UvrB domain CLM98_15900 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CLM98_15900 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_15900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_15910 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_15910 IPR003356 DNA methylase, adenine-specific CLM98_15910 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLM98_15910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_15920 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_15925 IPR002104 Integrase, catalytic CLM98_15925 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_15925 IPR013762 Integrase-like, catalytic core CLM98_15930 IPR002104 Integrase, catalytic CLM98_15930 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_15930 IPR013762 Integrase-like, catalytic core CLM98_15935 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_15935 IPR011344 Single-stranded DNA-binding protein CLM98_15935 IPR012340 Nucleic acid-binding, OB-fold CLM98_15940 IPR000092 Polyprenyl synthetase CLM98_15940 IPR008949 Terpenoid synthase CLM98_15940 IPR033749 CLM98_15940 CLM98_15945 IPR002925 Dienelactone hydrolase CLM98_15945 IPR029058 Alpha/Beta hydrolase fold CLM98_15955 IPR004101 Mur ligase, C-terminal CLM98_15955 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CLM98_15955 IPR013221 Mur ligase, central CLM98_15955 IPR018109 Folylpolyglutamate synthetase, conserved site CLM98_15955 IPR036565 CLM98_15955 CLM98_15955 IPR036615 CLM98_15955 CLM98_15970 IPR000183 Ornithine/DAP/Arg decarboxylase CLM98_15970 IPR001048 Aspartate/glutamate/uridylate kinase CLM98_15970 IPR001341 Aspartate kinase domain CLM98_15970 IPR002986 Diaminopimelate decarboxylase, LysA CLM98_15970 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_15970 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase CLM98_15970 IPR018042 Aspartate kinase, conserved site CLM98_15970 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CLM98_15970 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLM98_15970 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CLM98_15970 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CLM98_15970 IPR029066 PLP-binding barrel CLM98_15970 IPR036393 CLM98_15970 CLM98_15975 IPR003719 Phenazine biosynthesis PhzF protein CLM98_15980 IPR003719 Phenazine biosynthesis PhzF protein CLM98_15985 IPR008816 Glycine zipper 2TM domain CLM98_15990 IPR003718 OsmC/Ohr family CLM98_15990 IPR015946 K homology domain-like, alpha/beta CLM98_15990 IPR019904 Peroxiredoxin OsmC CLM98_15990 IPR036102 CLM98_15990 CLM98_15995 IPR002082 Aspartate carbamoyltransferase CLM98_15995 IPR006130 Aspartate/ornithine carbamoyltransferase CLM98_15995 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLM98_15995 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLM98_15995 IPR036901 CLM98_15995 CLM98_16000 IPR005227 Resolvase, holliday junction-type, YqgF-like CLM98_16000 IPR006641 YqgF/RNase H-like domain CLM98_16000 IPR012337 Ribonuclease H-like domain CLM98_16000 IPR037027 CLM98_16000 CLM98_16005 IPR003774 Protein of unknown function UPF0301 CLM98_16015 IPR005019 Methyladenine glycosylase CLM98_16015 IPR011257 DNA glycosylase CLM98_16020 IPR002763 Protein of unknown function DUF72 CLM98_16020 IPR036520 CLM98_16020 CLM98_16025 IPR004898 Pectate lyase, catalytic CLM98_16025 IPR011050 Pectin lyase fold/virulence factor CLM98_16025 IPR012334 Pectin lyase fold CLM98_16030 IPR001482 Type II secretion system protein E CLM98_16030 IPR006321 Pilus retraction protein PilT CLM98_16030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16040 IPR001608 Alanine racemase, N-terminal CLM98_16040 IPR011078 Uncharacterised protein family UPF0001 CLM98_16040 IPR029066 PLP-binding barrel CLM98_16045 IPR000304 Pyrroline-5-carboxylate reductase CLM98_16045 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_16045 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLM98_16045 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CLM98_16045 IPR036291 CLM98_16045 CLM98_16050 IPR000119 Histone-like bacterial DNA-binding protein CLM98_16050 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLM98_16055 IPR011055 Duplicated hybrid motif CLM98_16055 IPR016047 Peptidase M23 CLM98_16060 IPR024476 Protein of unknown function DUF3861 CLM98_16070 IPR010835 Protein of unknown function DUF1439 CLM98_16075 IPR002818 ThiJ/PfpI CLM98_16075 IPR006286 Peptidase C56, PfpI CLM98_16075 IPR029062 Class I glutamine amidotransferase-like CLM98_16080 IPR001214 SET domain CLM98_16085 IPR000944 Transcription regulator Rrf2-like CLM98_16085 IPR014290 SUF system FeS cluster assembly, Rtf2-type regulator CLM98_16085 IPR036388 CLM98_16085 CLM98_16085 IPR036390 CLM98_16085 CLM98_16090 IPR000825 SUF system FeS cluster assembly, SufBD CLM98_16090 IPR010231 SUF system FeS cluster assembly, SufB CLM98_16090 IPR037284 CLM98_16090 CLM98_16095 IPR003439 ABC transporter-like CLM98_16095 IPR003593 AAA+ ATPase domain CLM98_16095 IPR010230 FeS cluster assembly SUF system, ATPase SufC CLM98_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16100 IPR000825 SUF system FeS cluster assembly, SufBD CLM98_16100 IPR011542 SUF system FeS cluster assembly, SufD CLM98_16100 IPR037284 CLM98_16100 CLM98_16105 IPR000192 Aminotransferase class V domain CLM98_16105 IPR010970 Cysteine desulfurase, SufS CLM98_16105 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_16105 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_16105 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16105 IPR016454 Cysteine desulfurase, NifS CLM98_16105 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLM98_16110 IPR000182 GNAT domain CLM98_16110 IPR016181 Acyl-CoA N-acyltransferase CLM98_16115 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_16115 IPR036922 CLM98_16115 CLM98_16120 IPR000531 TonB-dependent receptor, beta-barrel CLM98_16120 IPR010105 TonB-dependent siderophore receptor CLM98_16120 IPR012910 TonB-dependent receptor, plug CLM98_16120 IPR036942 CLM98_16120 CLM98_16120 IPR037066 CLM98_16120 CLM98_16125 IPR005123 Oxoglutarate/iron-dependent dioxygenase CLM98_16125 IPR006620 Prolyl 4-hydroxylase, alpha subunit CLM98_16125 IPR023550 PKHD-type hydroxylase CLM98_16130 IPR006597 Sel1-like CLM98_16130 IPR011990 Tetratricopeptide-like helical domain CLM98_16135 IPR032307 CLM98_16135 CLM98_16140 IPR014469 Protein of unknown function DUF2271 CLM98_16145 IPR019613 Protein of unknown function DUF4198 CLM98_16150 IPR003374 ApbE-like domain CLM98_16150 IPR024932 Flavin transferase ApbE CLM98_16155 IPR001094 Flavodoxin CLM98_16155 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_16155 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_16155 IPR008254 Flavodoxin/nitric oxide synthase CLM98_16155 IPR017938 Riboflavin synthase-like beta-barrel CLM98_16155 IPR029039 Flavoprotein-like CLM98_16155 IPR039261 CLM98_16155 CLM98_16160 IPR002048 EF-hand domain CLM98_16160 IPR011992 EF-hand domain pair CLM98_16160 IPR018247 EF-Hand 1, calcium-binding site CLM98_16165 IPR010282 Uncharacterised protein family HutD/Ves CLM98_16165 IPR011051 RmlC-like cupin domain CLM98_16165 IPR014710 RmlC-like jelly roll fold CLM98_16170 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLM98_16170 IPR010994 RuvA domain 2-like CLM98_16175 IPR002933 Peptidase M20 CLM98_16175 IPR011650 Peptidase M20, dimerisation domain CLM98_16180 IPR007341 Transglycosylase-associated protein CLM98_16185 IPR002575 Aminoglycoside phosphotransferase CLM98_16185 IPR011009 Protein kinase-like domain CLM98_16190 IPR005835 Nucleotidyl transferase CLM98_16190 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_16195 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CLM98_16195 IPR017788 DnaA regulatory inactivator Hda CLM98_16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16200 IPR002549 Uncharacterised protein family UPF0118 CLM98_16205 IPR018642 Protein of unknown function DUF2066 CLM98_16210 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CLM98_16210 IPR010918 AIR synthase-related protein, C-terminal domain CLM98_16210 IPR016188 PurM, N-terminal-like CLM98_16210 IPR036676 CLM98_16210 CLM98_16210 IPR036921 CLM98_16210 CLM98_16220 IPR002376 Formyl transferase, N-terminal CLM98_16220 IPR004607 Phosphoribosylglycinamide formyltransferase CLM98_16220 IPR036477 CLM98_16220 CLM98_16225 IPR021457 Protein of unknown function DUF3108 CLM98_16230 IPR021457 Protein of unknown function DUF3108 CLM98_16240 IPR001986 Enolpyruvate transferase domain CLM98_16240 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CLM98_16240 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLM98_16240 IPR036968 CLM98_16240 CLM98_16245 IPR002634 BolA protein CLM98_16245 IPR036065 CLM98_16245 CLM98_16250 IPR000644 CBS domain CLM98_16250 IPR001347 Sugar isomerase (SIS) CLM98_16250 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CLM98_16255 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase CLM98_16255 IPR023214 HAD-like domain CLM98_16255 IPR036412 CLM98_16255 CLM98_16260 IPR010664 Lipopolysaccharide assembly, LptC-related CLM98_16260 IPR026265 Lipopolysaccharide export system protein LptC CLM98_16265 IPR005653 Organic solvent tolerance-like, N-terminal CLM98_16265 IPR014340 Lipopolysaccharide assembly, LptA CLM98_16270 IPR003439 ABC transporter-like CLM98_16270 IPR003593 AAA+ ATPase domain CLM98_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16270 IPR030921 CLM98_16270 CLM98_16270 IPR032823 CLM98_16270 CLM98_16275 IPR000394 RNA polymerase sigma factor 54 CLM98_16275 IPR007046 RNA polymerase sigma factor 54, core-binding CLM98_16275 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLM98_16275 IPR038709 CLM98_16275 CLM98_16280 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CLM98_16280 IPR036567 CLM98_16280 CLM98_16285 IPR002178 PTS EIIA type-2 domain CLM98_16285 IPR016152 Phosphotransferase/anion transporter CLM98_16290 IPR003755 HPr(Ser) kinase/phosphorylase CLM98_16290 IPR011104 HPr kinase/phosphorylase, C-terminal CLM98_16290 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CLM98_16290 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like CLM98_16295 IPR005337 ATPase, P-loop-containing CLM98_16295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16300 IPR004701 Phosphotransferase system, mannose-type IIA component CLM98_16300 IPR036662 CLM98_16300 CLM98_16305 IPR000032 Phosphocarrier HPr protein-like CLM98_16305 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLM98_16305 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLM98_16305 IPR035895 CLM98_16305 CLM98_16310 IPR000121 PEP-utilising enzyme, C-terminal CLM98_16310 IPR006318 Phosphoenolpyruvate-utilising enzyme CLM98_16310 IPR008279 PEP-utilising enzyme, mobile domain CLM98_16310 IPR008731 Phosphotransferase system, enzyme I N-terminal CLM98_16310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_16310 IPR023151 PEP-utilising enzyme, conserved site CLM98_16310 IPR024692 Phosphotransferase system, enzyme I CLM98_16310 IPR036618 CLM98_16310 CLM98_16310 IPR036637 CLM98_16310 CLM98_16320 IPR000644 CBS domain CLM98_16320 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLM98_16320 IPR006668 Magnesium transporter, MgtE intracellular domain CLM98_16320 IPR006669 Magnesium transporter MgtE CLM98_16320 IPR036739 CLM98_16320 CLM98_16320 IPR038048 CLM98_16320 CLM98_16320 IPR038076 CLM98_16320 CLM98_16325 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_16325 IPR029058 Alpha/Beta hydrolase fold CLM98_16335 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CLM98_16340 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CLM98_16345 IPR008257 Renal dipeptidase family CLM98_16345 IPR032466 CLM98_16345 CLM98_16350 IPR002293 Amino acid/polyamine transporter I CLM98_16350 IPR004840 Amino acid permease, conserved site CLM98_16350 IPR004841 Amino acid permease/ SLC12A domain CLM98_16360 IPR002022 Pectate lyase/Amb allergen CLM98_16360 IPR011050 Pectin lyase fold/virulence factor CLM98_16360 IPR012334 Pectin lyase fold CLM98_16370 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16370 IPR002410 Peptidase S33 CLM98_16370 IPR005945 Proline-specific peptidase CLM98_16370 IPR029058 Alpha/Beta hydrolase fold CLM98_16380 IPR000792 Transcription regulator LuxR, C-terminal CLM98_16380 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CLM98_16380 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_16380 IPR036388 CLM98_16380 CLM98_16380 IPR036693 CLM98_16380 CLM98_16385 IPR002293 Amino acid/polyamine transporter I CLM98_16395 IPR002921 Fungal lipase-like domain CLM98_16395 IPR029058 Alpha/Beta hydrolase fold CLM98_16405 IPR009003 Trypsin-like cysteine/serine peptidase domain CLM98_16415 IPR038314 CLM98_16415 CLM98_16420 IPR001279 Beta-lactamase-like CLM98_16420 IPR036866 CLM98_16420 CLM98_16425 IPR006905 Tryptophan halogenase CLM98_16425 IPR033856 CLM98_16425 CLM98_16425 IPR036188 CLM98_16425 CLM98_16430 IPR003347 JmjC domain CLM98_16435 IPR010836 SapC CLM98_16440 IPR000531 TonB-dependent receptor, beta-barrel CLM98_16440 IPR010104 Bacterial TonB-dependent receptor CLM98_16440 IPR012910 TonB-dependent receptor, plug CLM98_16440 IPR037066 CLM98_16440 CLM98_16450 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLM98_16455 IPR000551 MerR-type HTH domain CLM98_16455 IPR009061 DNA binding domain, putative CLM98_16455 IPR010211 Redox-sensitive transcriptional activator SoxR CLM98_16455 IPR015358 Transcription regulator MerR, DNA binding CLM98_16460 IPR011701 Major facilitator superfamily CLM98_16460 IPR036259 CLM98_16460 CLM98_16470 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CLM98_16470 IPR016185 Pre-ATP-grasp domain CLM98_16475 IPR009576 Biofilm formation YgiB CLM98_16480 IPR007140 Protein of unknown function DUF350 CLM98_16485 IPR019621 Protein of unknown function DUF2491 CLM98_16490 IPR013099 Two pore domain potassium channel domain CLM98_16490 IPR036291 CLM98_16490 CLM98_16495 IPR007157 PspA/IM30 CLM98_16500 IPR019231 Protein of unknown function DUF2170 CLM98_16505 IPR000659 Pyridoxamine 5'-phosphate oxidase CLM98_16505 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CLM98_16505 IPR012349 FMN-binding split barrel CLM98_16505 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CLM98_16505 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CLM98_16510 IPR000623 Shikimate kinase/Threonine synthase-like 1 CLM98_16510 IPR023000 Shikimate kinase, conserved site CLM98_16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16510 IPR031322 CLM98_16510 CLM98_16515 IPR016037 3-dehydroquinate synthase AroB CLM98_16515 IPR030960 CLM98_16515 CLM98_16515 IPR030963 CLM98_16515 CLM98_16520 IPR036930 CLM98_16520 CLM98_16525 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLM98_16525 IPR006361 Uroporphyrinogen decarboxylase HemE CLM98_16525 IPR038071 CLM98_16525 CLM98_16530 IPR021070 Killing trait, RebB CLM98_16535 IPR021070 Killing trait, RebB CLM98_16540 IPR021070 Killing trait, RebB CLM98_16545 IPR021070 Killing trait, RebB CLM98_16555 IPR021070 Killing trait, RebB CLM98_16560 IPR021070 Killing trait, RebB CLM98_16580 IPR015020 Protein of unknown function DUF1906 CLM98_16580 IPR017853 Glycoside hydrolase, superfamily CLM98_16590 IPR029058 Alpha/Beta hydrolase fold CLM98_16595 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_16595 IPR009057 Homeodomain-like CLM98_16595 IPR018060 DNA binding HTH domain, AraC-type CLM98_16595 IPR018062 HTH domain AraC-type, conserved site CLM98_16595 IPR020449 Transcription regulator HTH, AraC- type CLM98_16595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16600 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLM98_16600 IPR011701 Major facilitator superfamily CLM98_16600 IPR036259 CLM98_16600 CLM98_16605 IPR001789 Signal transduction response regulator, receiver domain CLM98_16605 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_16605 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_16605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16605 IPR011006 CheY-like superfamily CLM98_16605 IPR011110 Two component regulator propeller CLM98_16605 IPR011123 Two component regulator three Y CLM98_16605 IPR013783 Immunoglobulin-like fold CLM98_16605 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_16605 IPR036097 CLM98_16605 CLM98_16605 IPR036890 CLM98_16605 CLM98_16610 IPR001789 Signal transduction response regulator, receiver domain CLM98_16610 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_16610 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_16610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16610 IPR011006 CheY-like superfamily CLM98_16610 IPR011110 Two component regulator propeller CLM98_16610 IPR011123 Two component regulator three Y CLM98_16610 IPR013783 Immunoglobulin-like fold CLM98_16610 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_16610 IPR036097 CLM98_16610 CLM98_16610 IPR036890 CLM98_16610 CLM98_16620 IPR001789 Signal transduction response regulator, receiver domain CLM98_16620 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_16620 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_16620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16620 IPR011006 CheY-like superfamily CLM98_16620 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_16620 IPR011110 Two component regulator propeller CLM98_16620 IPR011123 Two component regulator three Y CLM98_16620 IPR013783 Immunoglobulin-like fold CLM98_16620 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_16620 IPR036097 CLM98_16620 CLM98_16620 IPR036890 CLM98_16620 CLM98_16625 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_16625 IPR036761 CLM98_16625 CLM98_16630 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLM98_16630 IPR016174 Di-haem cytochrome, transmembrane CLM98_16635 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLM98_16635 IPR036761 CLM98_16635 CLM98_16640 IPR008554 Glutaredoxin-like CLM98_16640 IPR036249 CLM98_16640 CLM98_16645 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CLM98_16645 IPR005130 Serine dehydratase-like, alpha subunit CLM98_16645 IPR005131 Serine dehydratase beta chain CLM98_16645 IPR029009 Allosteric substrate binding domain CLM98_16650 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16650 IPR000639 Epoxide hydrolase-like CLM98_16650 IPR029058 Alpha/Beta hydrolase fold CLM98_16660 IPR001342 Homoserine dehydrogenase, catalytic CLM98_16660 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLM98_16660 IPR019811 Homoserine dehydrogenase, conserved site CLM98_16660 IPR022697 Homoserine dehydrogenase lacking ACT domain CLM98_16660 IPR036291 CLM98_16660 CLM98_16665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLM98_16665 IPR011821 O-succinylhomoserine (thiol)-lyase CLM98_16665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_16665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_16665 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16670 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16670 IPR008220 Homoserine acetyltransferase CLM98_16670 IPR029058 Alpha/Beta hydrolase fold CLM98_16675 IPR011055 Duplicated hybrid motif CLM98_16675 IPR016047 Peptidase M23 CLM98_16680 IPR000795 Elongation factor, GTP-binding domain CLM98_16680 IPR004548 Peptide chain release factor 3 CLM98_16680 IPR005225 Small GTP-binding protein domain CLM98_16680 IPR009000 Translation protein, beta-barrel domain CLM98_16680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16680 IPR031157 CLM98_16680 CLM98_16680 IPR032090 CLM98_16680 CLM98_16680 IPR035647 CLM98_16680 CLM98_16680 IPR038467 CLM98_16680 CLM98_16685 IPR004254 Hly-III-related CLM98_16685 IPR005744 HylII CLM98_16690 IPR007844 AsmA CLM98_16695 IPR000644 CBS domain CLM98_16700 IPR001173 Glycosyltransferase 2-like CLM98_16700 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_16705 IPR001264 Glycosyl transferase, family 51 CLM98_16705 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase CLM98_16705 IPR023346 Lysozyme-like domain CLM98_16705 IPR036950 CLM98_16705 CLM98_16710 IPR000397 Heat shock protein Hsp33 CLM98_16710 IPR016153 Heat shock protein Hsp33, N-terminal CLM98_16710 IPR016154 Heat shock protein Hsp33, C-terminal CLM98_16710 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CLM98_16720 IPR000531 TonB-dependent receptor, beta-barrel CLM98_16720 IPR012910 TonB-dependent receptor, plug CLM98_16720 IPR036942 CLM98_16720 CLM98_16720 IPR037066 CLM98_16720 CLM98_16725 IPR011990 Tetratricopeptide-like helical domain CLM98_16725 IPR019734 Tetratricopeptide repeat CLM98_16725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_16730 IPR001647 DNA-binding HTH domain, TetR-type CLM98_16730 IPR009057 Homeodomain-like CLM98_16730 IPR036271 CLM98_16730 CLM98_16735 IPR000073 Alpha/beta hydrolase fold-1 CLM98_16735 IPR022742 Putative lysophospholipase CLM98_16735 IPR029058 Alpha/Beta hydrolase fold CLM98_16740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLM98_16740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLM98_16740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLM98_16740 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CLM98_16740 IPR036250 CLM98_16740 CLM98_16740 IPR037069 CLM98_16740 CLM98_16745 IPR009732 Protein of unknown function DUF1304 CLM98_16750 IPR011701 Major facilitator superfamily CLM98_16750 IPR036259 CLM98_16750 CLM98_16755 IPR001466 Beta-lactamase-related CLM98_16755 IPR012338 Beta-lactamase/transpeptidase-like CLM98_16765 IPR002930 Glycine cleavage system H-protein CLM98_16765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_16765 IPR011053 Single hybrid motif CLM98_16765 IPR017453 Glycine cleavage system H-protein, subgroup CLM98_16765 IPR033753 CLM98_16765 CLM98_16770 IPR006222 Glycine cleavage T-protein, N-terminal CLM98_16770 IPR006223 Glycine cleavage system T protein CLM98_16770 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CLM98_16770 IPR022903 Glycine cleavage system T protein, bacteria CLM98_16770 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLM98_16770 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CLM98_16770 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CLM98_16785 IPR003844 Uncharacterised protein family UPF0060 CLM98_16790 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLM98_16790 IPR011551 NTP pyrophosphohydrolase MazG, bacterial CLM98_16795 IPR000760 Inositol monophosphatase CLM98_16795 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial CLM98_16795 IPR020550 Inositol monophosphatase, conserved site CLM98_16795 IPR020583 Inositol monophosphatase, metal-binding site CLM98_16800 IPR000086 NUDIX hydrolase domain CLM98_16800 IPR015797 NUDIX hydrolase domain-like CLM98_16800 IPR020084 NUDIX hydrolase, conserved site CLM98_16805 IPR005814 Aminotransferase class-III CLM98_16805 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CLM98_16805 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_16805 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_16805 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_16810 IPR006700 Ribosomal RNA small subunit methyltransferase E CLM98_16810 IPR015947 PUA-like domain CLM98_16810 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_16810 IPR029028 Alpha/beta knot methyltransferases CLM98_16815 IPR003836 Glucokinase CLM98_16820 IPR000531 TonB-dependent receptor, beta-barrel CLM98_16820 IPR010104 Bacterial TonB-dependent receptor CLM98_16820 IPR012910 TonB-dependent receptor, plug CLM98_16820 IPR037066 CLM98_16820 CLM98_16825 IPR000933 Glycoside hydrolase, family 29 CLM98_16825 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_16825 IPR016286 Alpha-L-fucosidase, metazoa-type CLM98_16825 IPR017853 Glycoside hydrolase, superfamily CLM98_16825 IPR031919 CLM98_16825 CLM98_16830 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLM98_16830 IPR011583 Chitinase II CLM98_16830 IPR017853 Glycoside hydrolase, superfamily CLM98_16830 IPR029070 Chitinase insertion domain CLM98_16840 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_16840 IPR008979 Galactose-binding domain-like CLM98_16840 IPR013783 Immunoglobulin-like fold CLM98_16840 IPR017853 Glycoside hydrolase, superfamily CLM98_16840 IPR036156 CLM98_16840 CLM98_16845 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_16845 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_16845 IPR011658 PA14 CLM98_16845 IPR013783 Immunoglobulin-like fold CLM98_16845 IPR017853 Glycoside hydrolase, superfamily CLM98_16845 IPR026891 Fibronectin type III-like domain CLM98_16845 IPR036881 CLM98_16845 CLM98_16845 IPR036962 CLM98_16845 CLM98_16850 IPR000531 TonB-dependent receptor, beta-barrel CLM98_16850 IPR010104 Bacterial TonB-dependent receptor CLM98_16850 IPR012910 TonB-dependent receptor, plug CLM98_16850 IPR013784 Carbohydrate-binding-like fold CLM98_16850 IPR037066 CLM98_16850 CLM98_16855 IPR001944 Glycoside hydrolase, family 35 CLM98_16855 IPR008979 Galactose-binding domain-like CLM98_16855 IPR017853 Glycoside hydrolase, superfamily CLM98_16855 IPR019801 Glycoside hydrolase, family 35, conserved site CLM98_16855 IPR026283 Beta-galactosidase 1-like CLM98_16855 IPR031330 CLM98_16855 CLM98_16860 IPR002293 Amino acid/polyamine transporter I CLM98_16870 IPR001088 Glycoside hydrolase, family 4 CLM98_16870 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLM98_16870 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLM98_16870 IPR036291 CLM98_16870 CLM98_16875 IPR008313 Uncharacterised conserved protein UCP028846 CLM98_16875 IPR008928 Six-hairpin glycosidase-like CLM98_16875 IPR012341 Six-hairpin glycosidase CLM98_16880 IPR005887 Alpha-1,2-mannosidase, putative CLM98_16880 IPR008928 Six-hairpin glycosidase-like CLM98_16880 IPR012939 Glycosyl hydrolase family 92 CLM98_16880 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_16885 IPR001944 Glycoside hydrolase, family 35 CLM98_16885 IPR008979 Galactose-binding domain-like CLM98_16885 IPR017853 Glycoside hydrolase, superfamily CLM98_16885 IPR019801 Glycoside hydrolase, family 35, conserved site CLM98_16885 IPR026283 Beta-galactosidase 1-like CLM98_16885 IPR031330 CLM98_16885 CLM98_16900 IPR021070 Killing trait, RebB CLM98_16910 IPR011040 Sialidases CLM98_16910 IPR036278 CLM98_16910 CLM98_16915 IPR001611 Leucine-rich repeat CLM98_16915 IPR003591 Leucine-rich repeat, typical subtype CLM98_16915 IPR032675 CLM98_16915 CLM98_16920 IPR005627 Copper homeostasis protein CutC CLM98_16920 IPR023648 Copper homeostasis CutC domain CLM98_16920 IPR036822 CLM98_16920 CLM98_16925 IPR000246 Peptidase T2, asparaginase 2 CLM98_16925 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_16945 IPR000182 GNAT domain CLM98_16945 IPR016181 Acyl-CoA N-acyltransferase CLM98_16950 IPR002545 CheW-like protein CLM98_16950 IPR036061 CLM98_16950 CLM98_16955 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_16955 IPR012071 Chemotaxis glutamate methyltransferase CLM98_16955 IPR035909 CLM98_16955 CLM98_16960 IPR001789 Signal transduction response regulator, receiver domain CLM98_16960 IPR002545 CheW-like protein CLM98_16960 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_16960 IPR004105 Histidine kinase CheA-like, homodimeric domain CLM98_16960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_16960 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLM98_16960 IPR011006 CheY-like superfamily CLM98_16960 IPR036061 CLM98_16960 CLM98_16960 IPR036641 CLM98_16960 CLM98_16960 IPR036890 CLM98_16960 CLM98_16965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_16965 IPR004090 Chemotaxis methyl-accepting receptor CLM98_16970 IPR002545 CheW-like protein CLM98_16970 IPR036061 CLM98_16970 CLM98_16975 IPR001789 Signal transduction response regulator, receiver domain CLM98_16975 IPR011006 CheY-like superfamily CLM98_16980 IPR001789 Signal transduction response regulator, receiver domain CLM98_16980 IPR011006 CheY-like superfamily CLM98_16985 IPR004215 Prokaryotic glutathione synthetase, N-terminal CLM98_16985 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CLM98_16985 IPR006284 Glutathione synthetase, prokaryotic CLM98_16985 IPR013815 ATP-grasp fold, subdomain 1 CLM98_16985 IPR016185 Pre-ATP-grasp domain CLM98_16990 IPR006260 TonB, C-terminal CLM98_16990 IPR037682 CLM98_16990 CLM98_16995 IPR005502 ADP-ribosylation/Crystallin J1 CLM98_16995 IPR036705 CLM98_16995 CLM98_17000 IPR000905 Gcp-like domain CLM98_17000 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ CLM98_17005 IPR006555 ATP-dependent helicase, C-terminal CLM98_17005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17010 IPR011990 Tetratricopeptide-like helical domain CLM98_17015 IPR001264 Glycosyl transferase, family 51 CLM98_17015 IPR001460 Penicillin-binding protein, transpeptidase CLM98_17015 IPR011813 Penicillin-binding protein 1B CLM98_17015 IPR012338 Beta-lactamase/transpeptidase-like CLM98_17015 IPR023346 Lysozyme-like domain CLM98_17015 IPR028166 Bifunctional transglycosylase second domain CLM98_17015 IPR036950 CLM98_17015 CLM98_17020 IPR001173 Glycosyltransferase 2-like CLM98_17020 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_17030 IPR011990 Tetratricopeptide-like helical domain CLM98_17040 IPR002912 ACT domain CLM98_17040 IPR003607 HD/PDEase domain CLM98_17040 IPR004095 TGS CLM98_17040 IPR004811 RelA/SpoT family CLM98_17040 IPR007685 RelA/SpoT CLM98_17040 IPR012675 Beta-grasp domain CLM98_17040 IPR012676 TGS-like CLM98_17045 IPR011725 Coenzyme PQQ biosynthesis protein A CLM98_17050 IPR001279 Beta-lactamase-like CLM98_17050 IPR011842 Coenzyme PQQ biosynthesis protein B CLM98_17050 IPR036866 CLM98_17050 CLM98_17055 IPR004305 Thiaminase-2/PQQC CLM98_17055 IPR011845 Coenzyme PQQ biosynthesis protein C CLM98_17055 IPR016084 Haem oxygenase-like, multi-helical CLM98_17060 IPR008792 Coenzyme PQQ synthesis D CLM98_17060 IPR022479 Coenzyme PQQ synthesis D, bacteria CLM98_17065 IPR007197 Radical SAM CLM98_17065 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CLM98_17065 IPR013785 Aldolase-type TIM barrel CLM98_17065 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ CLM98_17065 IPR023885 4Fe4S-binding SPASM domain CLM98_17075 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type CLM98_17075 IPR029058 Alpha/Beta hydrolase fold CLM98_17080 IPR003836 Glucokinase CLM98_17085 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17085 IPR010104 Bacterial TonB-dependent receptor CLM98_17085 IPR012910 TonB-dependent receptor, plug CLM98_17085 IPR036942 CLM98_17085 CLM98_17085 IPR037066 CLM98_17085 CLM98_17095 IPR001650 Helicase, C-terminal CLM98_17095 IPR003593 AAA+ ATPase domain CLM98_17095 IPR007502 Helicase-associated domain CLM98_17095 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type CLM98_17095 IPR011545 DEAD/DEAH box helicase domain CLM98_17095 IPR011709 Domain of unknown function DUF1605 CLM98_17095 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_17095 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal CLM98_17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17100 IPR002177 DNA-binding protein Dps CLM98_17100 IPR008331 Ferritin/DPS protein domain CLM98_17100 IPR009078 Ferritin-like superfamily CLM98_17100 IPR012347 Ferritin-related CLM98_17100 IPR023188 DNA-binding protein Dps, conserved site CLM98_17110 IPR001650 Helicase, C-terminal CLM98_17110 IPR002121 HRDC domain CLM98_17110 IPR004589 DNA helicase, ATP-dependent, RecQ type CLM98_17110 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CLM98_17110 IPR010997 HRDC-like CLM98_17110 IPR011545 DEAD/DEAH box helicase domain CLM98_17110 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_17110 IPR018982 RQC domain CLM98_17110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17110 IPR032284 CLM98_17110 CLM98_17110 IPR036388 CLM98_17110 CLM98_17120 IPR001789 Signal transduction response regulator, receiver domain CLM98_17120 IPR011006 CheY-like superfamily CLM98_17130 IPR002942 RNA-binding S4 domain CLM98_17130 IPR020103 Pseudouridine synthase, catalytic domain CLM98_17130 IPR036986 CLM98_17130 CLM98_17145 IPR003660 HAMP linker domain CLM98_17145 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_17145 IPR004090 Chemotaxis methyl-accepting receptor CLM98_17145 IPR024478 4HB MCP domain CLM98_17150 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CLM98_17155 IPR000847 Transcription regulator HTH, LysR CLM98_17155 IPR005119 LysR, substrate-binding CLM98_17155 IPR017685 Transcription regulator ArgP CLM98_17155 IPR036388 CLM98_17155 CLM98_17155 IPR036390 CLM98_17155 CLM98_17160 IPR001789 Signal transduction response regulator, receiver domain CLM98_17160 IPR011006 CheY-like superfamily CLM98_17165 IPR000014 PAS domain CLM98_17165 IPR011102 Signal transduction histidine kinase, HWE region CLM98_17165 IPR013656 PAS fold-4 CLM98_17165 IPR035965 CLM98_17165 CLM98_17165 IPR036890 CLM98_17165 CLM98_17170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_17170 IPR018317 Queuosine biosynthesis protein QueC CLM98_17180 IPR007197 Radical SAM CLM98_17180 IPR013785 Aldolase-type TIM barrel CLM98_17180 IPR024924 7-carboxy-7-deazaguanine synthase-like CLM98_17180 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE CLM98_17185 IPR011990 Tetratricopeptide-like helical domain CLM98_17185 IPR014162 Tol-Pal system, YbgF CLM98_17185 IPR032519 CLM98_17185 CLM98_17185 IPR034706 CLM98_17185 CLM98_17185 IPR039565 CLM98_17185 CLM98_17190 IPR006664 Outer membrane protein, bacterial CLM98_17190 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_17190 IPR014169 Peptidoglycan-associated lipoprotein CLM98_17190 IPR036737 CLM98_17190 CLM98_17190 IPR039001 CLM98_17190 CLM98_17195 IPR007195 TolB, N-terminal CLM98_17195 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_17195 IPR011659 WD40-like Beta Propeller CLM98_17195 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB CLM98_17195 IPR036752 CLM98_17195 CLM98_17200 IPR014161 Tol-Pal system, TolA CLM98_17205 IPR003400 Biopolymer transport protein ExbD/TolR CLM98_17205 IPR014168 Biopolymer transport, TolR CLM98_17210 IPR002898 MotA/TolQ/ExbB proton channel CLM98_17210 IPR014163 Tol-Pal system, TolQ CLM98_17215 IPR006683 Thioesterase superfamily CLM98_17215 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CLM98_17215 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CLM98_17215 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CLM98_17215 IPR029069 HotDog domain CLM98_17220 IPR003593 AAA+ ATPase domain CLM98_17220 IPR004605 DNA helicase, Holliday junction RuvB type CLM98_17220 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal CLM98_17220 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal CLM98_17220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17220 IPR036388 CLM98_17220 CLM98_17220 IPR036390 CLM98_17220 CLM98_17230 IPR003855 K+ potassium transporter CLM98_17230 IPR023051 Potassium uptake protein, low affinity, Kup CLM98_17235 IPR000085 Bacterial DNA recombination protein RuvA CLM98_17235 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLM98_17235 IPR010994 RuvA domain 2-like CLM98_17235 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal CLM98_17235 IPR012340 Nucleic acid-binding, OB-fold CLM98_17235 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CLM98_17235 IPR036267 CLM98_17235 CLM98_17240 IPR002176 Crossover junction endodeoxyribonuclease RuvC CLM98_17240 IPR012337 Ribonuclease H-like domain CLM98_17240 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CLM98_17240 IPR036397 CLM98_17240 CLM98_17245 IPR002876 Transcriptional regulator TACO1-like CLM98_17245 IPR017856 Integrase, N-terminal zinc-binding domain-like CLM98_17245 IPR026564 Transcriptional regulator TACO1-like, domain 3 CLM98_17245 IPR029072 YebC-like CLM98_17250 IPR029058 Alpha/Beta hydrolase fold CLM98_17255 IPR000182 GNAT domain CLM98_17255 IPR016181 Acyl-CoA N-acyltransferase CLM98_17260 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLM98_17260 IPR004115 GAD-like domain CLM98_17260 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLM98_17260 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLM98_17260 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type CLM98_17260 IPR012340 Nucleic acid-binding, OB-fold CLM98_17260 IPR029351 GAD domain CLM98_17265 IPR021381 Protein of unknown function DUF3011 CLM98_17270 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CLM98_17275 IPR011701 Major facilitator superfamily CLM98_17275 IPR036259 CLM98_17275 CLM98_17280 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17280 IPR012910 TonB-dependent receptor, plug CLM98_17280 IPR037066 CLM98_17280 CLM98_17285 IPR007312 Phosphoesterase CLM98_17285 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLM98_17290 IPR007312 Phosphoesterase CLM98_17290 IPR008475 Bacterial phospholipase C, C-terminal domain CLM98_17290 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLM98_17305 IPR000871 Beta-lactamase, class-A/D CLM98_17305 IPR012338 Beta-lactamase/transpeptidase-like CLM98_17305 IPR023650 Beta-lactamase, class-A active site CLM98_17310 IPR000847 Transcription regulator HTH, LysR CLM98_17310 IPR005119 LysR, substrate-binding CLM98_17310 IPR036388 CLM98_17310 CLM98_17310 IPR036390 CLM98_17310 CLM98_17315 IPR025588 YcxB-like protein CLM98_17320 IPR003439 ABC transporter-like CLM98_17320 IPR003593 AAA+ ATPase domain CLM98_17320 IPR017871 ABC transporter, conserved site CLM98_17320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17320 IPR032524 CLM98_17320 CLM98_17320 IPR032781 CLM98_17320 CLM98_17325 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17325 IPR010916 TonB box, conserved site CLM98_17325 IPR012910 TonB-dependent receptor, plug CLM98_17325 IPR036942 CLM98_17325 CLM98_17325 IPR037066 CLM98_17325 CLM98_17335 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_17335 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_17340 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17340 IPR010916 TonB box, conserved site CLM98_17340 IPR012910 TonB-dependent receptor, plug CLM98_17340 IPR037066 CLM98_17340 CLM98_17345 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17345 IPR010916 TonB box, conserved site CLM98_17345 IPR012910 TonB-dependent receptor, plug CLM98_17345 IPR036942 CLM98_17345 CLM98_17345 IPR037066 CLM98_17345 CLM98_17350 IPR001128 Cytochrome P450 CLM98_17350 IPR002397 Cytochrome P450, B-class CLM98_17350 IPR036396 CLM98_17350 CLM98_17360 IPR003148 Regulator of K+ conductance, N-terminal CLM98_17360 IPR006153 Cation/H+ exchanger CLM98_17360 IPR036291 CLM98_17360 CLM98_17360 IPR038770 CLM98_17360 CLM98_17370 IPR029058 Alpha/Beta hydrolase fold CLM98_17380 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CLM98_17380 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_17385 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17385 IPR010105 TonB-dependent siderophore receptor CLM98_17385 IPR012910 TonB-dependent receptor, plug CLM98_17385 IPR036942 CLM98_17385 CLM98_17385 IPR037066 CLM98_17385 CLM98_17390 IPR003806 ATP-grasp fold, DUF201-type CLM98_17395 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CLM98_17395 IPR022770 Ferric iron reductase FhuF domain CLM98_17400 IPR011701 Major facilitator superfamily CLM98_17400 IPR036259 CLM98_17400 CLM98_17405 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CLM98_17405 IPR022770 Ferric iron reductase FhuF domain CLM98_17410 IPR000183 Ornithine/DAP/Arg decarboxylase CLM98_17410 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_17410 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CLM98_17410 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLM98_17410 IPR029066 PLP-binding barrel CLM98_17425 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase CLM98_17430 IPR013078 Histidine phosphatase superfamily, clade-1 CLM98_17430 IPR029033 Histidine phosphatase superfamily CLM98_17435 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CLM98_17435 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CLM98_17435 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CLM98_17435 IPR036087 CLM98_17435 CLM98_17440 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CLM98_17440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17445 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_17445 IPR004459 Cobyric acid synthase CobQ CLM98_17445 IPR011698 CobB/CobQ-like glutamine amidotransferase CLM98_17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17445 IPR029062 Class I glutamine amidotransferase-like CLM98_17450 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLM98_17450 IPR004839 Aminotransferase, class I/classII CLM98_17450 IPR005860 L-threonine-O-3-phosphate decarboxylase CLM98_17450 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_17450 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_17450 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_17455 IPR004485 Cobalamin biosynthesis CobD/CbiB CLM98_17460 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CLM98_17460 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CLM98_17460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17475 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17475 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLM98_17475 IPR012910 TonB-dependent receptor, plug CLM98_17475 IPR036942 CLM98_17475 CLM98_17475 IPR037066 CLM98_17475 CLM98_17480 IPR001270 ClpA/B family CLM98_17480 IPR003593 AAA+ ATPase domain CLM98_17480 IPR003959 ATPase, AAA-type, core CLM98_17480 IPR004176 Clp, N-terminal CLM98_17480 IPR017730 Chaperonin ClpB CLM98_17480 IPR018368 ClpA/B, conserved site 1 CLM98_17480 IPR019489 Clp ATPase, C-terminal CLM98_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17480 IPR028299 ClpA/B, conserved site 2 CLM98_17480 IPR036628 CLM98_17480 CLM98_17485 IPR003439 ABC transporter-like CLM98_17485 IPR003593 AAA+ ATPase domain CLM98_17485 IPR017871 ABC transporter, conserved site CLM98_17485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17490 IPR000515 MetI-like domain CLM98_17490 IPR035906 CLM98_17490 CLM98_17495 IPR001638 Extracellular solute-binding protein, family 3 CLM98_17495 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates CLM98_17495 IPR015168 SsuA/THI5-like CLM98_17500 IPR023210 NADP-dependent oxidoreductase domain CLM98_17500 IPR036812 CLM98_17500 CLM98_17505 IPR011251 Luciferase-like domain CLM98_17505 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CLM98_17505 IPR036661 CLM98_17505 CLM98_17510 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17510 IPR012910 TonB-dependent receptor, plug CLM98_17510 IPR036942 CLM98_17510 CLM98_17515 IPR000305 GIY-YIG nuclease superfamily CLM98_17515 IPR035901 CLM98_17515 CLM98_17520 IPR004046 Glutathione S-transferase, C-terminal CLM98_17520 IPR036249 CLM98_17520 CLM98_17520 IPR036282 CLM98_17520 CLM98_17525 IPR021382 Protein of unknown function DUF3014 CLM98_17530 IPR009739 Protein of unknown function DUF1311 CLM98_17545 IPR021957 Protein of unknown function DUF3574 CLM98_17550 IPR000531 TonB-dependent receptor, beta-barrel CLM98_17550 IPR010916 TonB box, conserved site CLM98_17550 IPR012910 TonB-dependent receptor, plug CLM98_17550 IPR036942 CLM98_17550 CLM98_17550 IPR037066 CLM98_17550 CLM98_17555 IPR003337 Trehalose-phosphatase CLM98_17555 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLM98_17555 IPR023214 HAD-like domain CLM98_17555 IPR036412 CLM98_17555 CLM98_17560 IPR008928 Six-hairpin glycosidase-like CLM98_17560 IPR011613 Glycoside hydrolase family 15 CLM98_17560 IPR012341 Six-hairpin glycosidase CLM98_17565 IPR001830 Glycosyl transferase, family 20 CLM98_17565 IPR012766 Alpha,alpha-trehalose-phosphate synthase CLM98_17570 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_17570 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_17570 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related CLM98_17570 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_17580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_17580 IPR004090 Chemotaxis methyl-accepting receptor CLM98_17585 IPR007263 Protein of unknown function DUF393 CLM98_17590 IPR025311 Domain of unknown function DUF4166 CLM98_17595 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLM98_17595 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLM98_17595 IPR038371 CLM98_17595 CLM98_17600 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_17600 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLM98_17600 IPR006225 Pseudouridine synthase, RluC/RluD CLM98_17600 IPR020103 Pseudouridine synthase, catalytic domain CLM98_17600 IPR036986 CLM98_17600 CLM98_17605 IPR011990 Tetratricopeptide-like helical domain CLM98_17605 IPR017689 Outer membrane protein assembly factor BamD CLM98_17605 IPR039565 CLM98_17605 CLM98_17610 IPR017853 Glycoside hydrolase, superfamily CLM98_17615 IPR003010 Carbon-nitrogen hydrolase CLM98_17615 IPR003694 NAD(+) synthetase CLM98_17615 IPR014445 Glutamine-dependent NAD(+) synthetase CLM98_17615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_17615 IPR022310 NAD/GMP synthase CLM98_17615 IPR036526 CLM98_17615 CLM98_17620 IPR007569 Domain of unknown function DUF559 CLM98_17620 IPR011335 Restriction endonuclease type II-like CLM98_17655 IPR021104 KfrA, N-terminal DNA-binding domain CLM98_17660 IPR000768 NAD:arginine ADP-ribosyltransferase, ART CLM98_17675 IPR024442 Transposase, zinc-ribbon CLM98_17675 IPR024445 Transposase, ISXO2-like CLM98_17685 IPR003781 CoA-binding CLM98_17685 IPR005810 Succinyl-CoA ligase, alpha subunit CLM98_17685 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLM98_17685 IPR016102 Succinyl-CoA synthetase-like CLM98_17685 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CLM98_17685 IPR033847 CLM98_17685 CLM98_17685 IPR036291 CLM98_17685 CLM98_17690 IPR005809 Succinyl-CoA synthetase, beta subunit CLM98_17690 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLM98_17690 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CLM98_17690 IPR013815 ATP-grasp fold, subdomain 1 CLM98_17690 IPR016102 Succinyl-CoA synthetase-like CLM98_17690 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CLM98_17695 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_17695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_17695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17695 IPR036097 CLM98_17695 CLM98_17695 IPR036890 CLM98_17695 CLM98_17700 IPR001789 Signal transduction response regulator, receiver domain CLM98_17700 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_17700 IPR002197 DNA binding HTH domain, Fis-type CLM98_17700 IPR003593 AAA+ ATPase domain CLM98_17700 IPR009057 Homeodomain-like CLM98_17700 IPR011006 CheY-like superfamily CLM98_17700 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_17700 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLM98_17700 IPR025944 Sigma-54 interaction domain, conserved site CLM98_17700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17720 IPR001482 Type II secretion system protein E CLM98_17720 IPR007831 General secretory system II, protein E, N-terminal CLM98_17720 IPR013374 ATPase, type IV, pilus assembly, PilB CLM98_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17720 IPR037257 CLM98_17720 CLM98_17725 IPR001082 Fimbrial protein pilin CLM98_17725 IPR012902 Prokaryotic N-terminal methylation site CLM98_17730 IPR001082 Fimbrial protein pilin CLM98_17730 IPR012902 Prokaryotic N-terminal methylation site CLM98_17735 IPR001992 Type II secretion system conserved site CLM98_17735 IPR003004 GspF/PilC family CLM98_17735 IPR018076 Type II secretion system F domain CLM98_17740 IPR000045 Prepilin type IV endopeptidase, peptidase domain CLM98_17740 IPR010627 Peptidase A24A, N-terminal CLM98_17740 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLM98_17745 IPR001977 Dephospho-CoA kinase CLM98_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_17750 IPR006530 YD repeat CLM98_17750 IPR022385 Rhs repeat-associated core CLM98_17750 IPR031325 CLM98_17750 CLM98_17760 IPR014944 Toxin SymE-like CLM98_17775 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_17775 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_17775 IPR036097 CLM98_17775 CLM98_17775 IPR036890 CLM98_17775 CLM98_17780 IPR001789 Signal transduction response regulator, receiver domain CLM98_17780 IPR001867 Signal transduction response regulator, C-terminal CLM98_17780 IPR011006 CheY-like superfamily CLM98_17780 IPR036388 CLM98_17780 CLM98_17795 IPR004193 Glycoside hydrolase, family 13, N-terminal CLM98_17795 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_17795 IPR011837 Glycogen debranching enzyme, GlgX type CLM98_17795 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_17795 IPR013783 Immunoglobulin-like fold CLM98_17795 IPR014756 Immunoglobulin E-set CLM98_17795 IPR017853 Glycoside hydrolase, superfamily CLM98_17805 IPR001801 Histone-like protein H-NS CLM98_17805 IPR027444 Histone-like protein H-NS, C-terminal domain CLM98_17815 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CLM98_17815 IPR035437 CLM98_17815 CLM98_17830 IPR009444 Conjugal transfer, TraD, alpha-type CLM98_17845 IPR036895 CLM98_17845 CLM98_17850 IPR032871 CLM98_17850 CLM98_17855 IPR012433 Protein of unknown function DUF1629 CLM98_17865 IPR001405 RadC protein CLM98_17865 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_17865 IPR025657 RadC-like JAB domain CLM98_17875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_17885 IPR029016 GAF domain-like CLM98_17885 IPR029787 Nucleotide cyclase CLM98_17890 IPR000014 PAS domain CLM98_17890 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_17890 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_17890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17890 IPR013656 PAS fold-4 CLM98_17890 IPR035965 CLM98_17890 CLM98_17890 IPR036097 CLM98_17890 CLM98_17890 IPR036890 CLM98_17890 CLM98_17895 IPR001789 Signal transduction response regulator, receiver domain CLM98_17895 IPR011006 CheY-like superfamily CLM98_17915 IPR007024 BLUF domain CLM98_17915 IPR036046 CLM98_17915 CLM98_17925 IPR002508 Cell wall hydrolase/autolysin, catalytic CLM98_17940 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_17940 IPR013762 Integrase-like, catalytic core CLM98_17955 IPR032359 CLM98_17955 CLM98_17965 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_17965 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_17985 IPR000014 PAS domain CLM98_17985 IPR001610 PAC motif CLM98_17985 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_17985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_17985 IPR013656 PAS fold-4 CLM98_17985 IPR035965 CLM98_17985 CLM98_17985 IPR036097 CLM98_17985 CLM98_17985 IPR036890 CLM98_17985 CLM98_17995 IPR003675 CAAX amino terminal protease CLM98_18015 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CLM98_18015 IPR035897 CLM98_18015 CLM98_18025 IPR002104 Integrase, catalytic CLM98_18025 IPR010998 Integrase, Lambda-type, N-terminal CLM98_18025 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_18025 IPR013762 Integrase-like, catalytic core CLM98_18035 IPR001087 Lipase, GDSL CLM98_18035 IPR005546 Autotransporter beta-domain CLM98_18035 IPR017186 Lipase, autotransporter EstA CLM98_18035 IPR036514 CLM98_18035 CLM98_18035 IPR036709 CLM98_18035 CLM98_18040 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CLM98_18040 IPR010035 ThiS, thiamine-biosynthesis CLM98_18040 IPR012675 Beta-grasp domain CLM98_18040 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLM98_18045 IPR008867 Thiazole biosynthesis CLM98_18045 IPR013785 Aldolase-type TIM barrel CLM98_18045 IPR033983 CLM98_18045 CLM98_18055 IPR003358 tRNA (guanine-N-7) methyltransferase CLM98_18055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_18060 IPR004680 Citrate transporter-like domain CLM98_18060 IPR006037 Regulator of K+ conductance, C-terminal CLM98_18060 IPR036721 CLM98_18060 CLM98_18065 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLM98_18065 IPR036922 CLM98_18065 CLM98_18080 IPR011234 Fumarylacetoacetase, C-terminal-related CLM98_18080 IPR036663 CLM98_18080 CLM98_18085 IPR001185 Large-conductance mechanosensitive channel CLM98_18085 IPR019823 Large-conductance mechanosensitive channel, conserved site CLM98_18085 IPR036019 CLM98_18085 CLM98_18085 IPR037673 CLM98_18085 CLM98_18090 IPR007484 Peptidase M28 CLM98_18095 IPR000843 Transcription regulator HTH, LacI CLM98_18095 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_18095 IPR028082 Periplasmic binding protein-like I CLM98_18100 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18100 IPR010104 Bacterial TonB-dependent receptor CLM98_18100 IPR012910 TonB-dependent receptor, plug CLM98_18100 IPR036942 CLM98_18100 CLM98_18100 IPR037066 CLM98_18100 CLM98_18105 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_18105 IPR006103 Glycoside hydrolase, family 2, TIM barrel CLM98_18105 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_18105 IPR008979 Galactose-binding domain-like CLM98_18105 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_18105 IPR013783 Immunoglobulin-like fold CLM98_18105 IPR017853 Glycoside hydrolase, superfamily CLM98_18105 IPR036156 CLM98_18105 CLM98_18110 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_18110 IPR013785 Aldolase-type TIM barrel CLM98_18110 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_18110 IPR017853 Glycoside hydrolase, superfamily CLM98_18110 IPR019563 Glycosyl-hydrolase 97, catalytic domain CLM98_18110 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain CLM98_18110 IPR029486 Glycosyl-hydrolase 97, N-terminal domain CLM98_18115 IPR004314 Domain of unknown function DUF239 CLM98_18120 IPR002018 Carboxylesterase, type B CLM98_18120 IPR019826 Carboxylesterase type B, active site CLM98_18120 IPR029058 Alpha/Beta hydrolase fold CLM98_18125 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLM98_18125 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLM98_18125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLM98_18125 IPR029028 Alpha/beta knot methyltransferases CLM98_18125 IPR029064 50S ribosomal protein L30e-like CLM98_18130 IPR000182 GNAT domain CLM98_18130 IPR016181 Acyl-CoA N-acyltransferase CLM98_18135 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLM98_18135 IPR024571 ERAP1-like C-terminal domain CLM98_18150 IPR012433 Protein of unknown function DUF1629 CLM98_18200 IPR001036 Acriflavin resistance protein CLM98_18200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_18205 IPR006143 RND efflux pump, membrane fusion protein CLM98_18205 IPR032317 CLM98_18205 CLM98_18210 IPR000795 Elongation factor, GTP-binding domain CLM98_18210 IPR002891 Adenylylsulphate kinase CLM98_18210 IPR009000 Translation protein, beta-barrel domain CLM98_18210 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLM98_18210 IPR011779 Sulphate adenylyltransferase, large subunit CLM98_18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18210 IPR031157 CLM98_18210 CLM98_18215 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_18215 IPR011784 Sulphate adenylyltransferase, small subunit CLM98_18215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_18220 IPR001094 Flavodoxin CLM98_18220 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_18220 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_18220 IPR003097 FAD-binding, type 1 CLM98_18220 IPR008254 Flavodoxin/nitric oxide synthase CLM98_18220 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CLM98_18220 IPR017938 Riboflavin synthase-like beta-barrel CLM98_18220 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 CLM98_18220 IPR029039 Flavoprotein-like CLM98_18220 IPR039261 CLM98_18220 CLM98_18225 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CLM98_18225 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CLM98_18225 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CLM98_18225 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CLM98_18225 IPR036136 CLM98_18225 CLM98_18230 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_18230 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CLM98_18230 IPR011800 Phosphoadenosine phosphosulphate reductase CysH CLM98_18230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_18235 IPR005625 PepSY-associated TM helix CLM98_18240 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18240 IPR012910 TonB-dependent receptor, plug CLM98_18240 IPR036942 CLM98_18240 CLM98_18240 IPR037066 CLM98_18240 CLM98_18250 IPR003018 GAF domain CLM98_18250 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_18250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_18250 IPR029016 GAF domain-like CLM98_18250 IPR036097 CLM98_18250 CLM98_18250 IPR036890 CLM98_18250 CLM98_18265 IPR000847 Transcription regulator HTH, LysR CLM98_18265 IPR005119 LysR, substrate-binding CLM98_18265 IPR036388 CLM98_18265 CLM98_18265 IPR036390 CLM98_18265 CLM98_18270 IPR000878 Tetrapyrrole methylase CLM98_18270 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLM98_18270 IPR006366 Uroporphyrin-III C-methyltransferase CLM98_18270 IPR006367 Sirohaem synthase, N-terminal CLM98_18270 IPR012409 Sirohaem synthase CLM98_18270 IPR014776 Tetrapyrrole methylase, subdomain 2 CLM98_18270 IPR014777 Tetrapyrrole methylase, subdomain 1 CLM98_18270 IPR035996 CLM98_18270 CLM98_18270 IPR036291 CLM98_18270 CLM98_18275 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLM98_18275 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_18275 IPR005856 Cysteine synthase K/M CLM98_18275 IPR005859 Cysteine synthase A CLM98_18275 IPR036052 CLM98_18275 CLM98_18280 IPR007318 Phospholipid methyltransferase CLM98_18285 IPR002589 Macro domain CLM98_18290 IPR000741 Fructose-bisphosphate aldolase, class-I CLM98_18290 IPR013785 Aldolase-type TIM barrel CLM98_18290 IPR029768 Fructose-bisphosphate aldolase class-I active site CLM98_18305 IPR001697 Pyruvate kinase CLM98_18305 IPR011037 Pyruvate kinase-like, insert domain CLM98_18305 IPR015793 Pyruvate kinase, barrel CLM98_18305 IPR015795 Pyruvate kinase, C-terminal CLM98_18305 IPR015806 Pyruvate kinase, beta-barrel insert domain CLM98_18305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLM98_18305 IPR018209 Pyruvate kinase, active site CLM98_18305 IPR036918 CLM98_18305 CLM98_18310 IPR006439 HAD hydrolase, subfamily IA CLM98_18310 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_18310 IPR023214 HAD-like domain CLM98_18310 IPR036412 CLM98_18310 CLM98_18315 IPR001576 Phosphoglycerate kinase CLM98_18315 IPR015824 Phosphoglycerate kinase, N-terminal CLM98_18315 IPR015911 Phosphoglycerate kinase, conserved site CLM98_18315 IPR036043 CLM98_18315 CLM98_18330 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CLM98_18330 IPR019286 Protein of unknown function DUF2339, transmembrane CLM98_18340 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLM98_18340 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLM98_18340 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLM98_18340 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLM98_18340 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLM98_18340 IPR036291 CLM98_18340 CLM98_18345 IPR011944 Steroid delta5-4-isomerase CLM98_18345 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain CLM98_18345 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related CLM98_18345 IPR032710 CLM98_18345 CLM98_18350 IPR005618 Outer membrane protein, OmpW CLM98_18350 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_18355 IPR005618 Outer membrane protein, OmpW CLM98_18355 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_18360 IPR003154 S1/P1 nuclease CLM98_18360 IPR008947 Phospholipase C/P1 nuclease domain CLM98_18365 IPR001279 Beta-lactamase-like CLM98_18365 IPR036866 CLM98_18365 CLM98_18370 IPR005950 Molybdenum ABC transporter, periplasmic binding protein CLM98_18375 IPR000515 MetI-like domain CLM98_18375 IPR011867 Molybdate ABC transporter, permease protein CLM98_18375 IPR035906 CLM98_18375 CLM98_18380 IPR003439 ABC transporter-like CLM98_18380 IPR003593 AAA+ ATPase domain CLM98_18380 IPR011868 Molybdate ABC transporter, ATP-binding protein CLM98_18380 IPR017871 ABC transporter, conserved site CLM98_18380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18390 IPR006260 TonB, C-terminal CLM98_18390 IPR008756 Peptidase M56 CLM98_18390 IPR037682 CLM98_18390 CLM98_18395 IPR005650 BlaI transcriptional regulatory family CLM98_18395 IPR036388 CLM98_18395 CLM98_18395 IPR036390 CLM98_18395 CLM98_18400 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CLM98_18400 IPR037171 CLM98_18400 CLM98_18400 IPR038460 CLM98_18400 CLM98_18405 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLM98_18405 IPR032075 CLM98_18405 CLM98_18410 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18410 IPR010104 Bacterial TonB-dependent receptor CLM98_18410 IPR012910 TonB-dependent receptor, plug CLM98_18410 IPR036942 CLM98_18410 CLM98_18410 IPR037066 CLM98_18410 CLM98_18415 IPR002477 Peptidoglycan binding-like CLM98_18415 IPR005490 L,D-transpeptidase catalytic domain CLM98_18415 IPR036365 CLM98_18415 CLM98_18415 IPR036366 CLM98_18415 CLM98_18415 IPR038063 CLM98_18415 CLM98_18420 IPR011055 Duplicated hybrid motif CLM98_18420 IPR016047 Peptidase M23 CLM98_18430 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18430 IPR010105 TonB-dependent siderophore receptor CLM98_18430 IPR012910 TonB-dependent receptor, plug CLM98_18430 IPR036942 CLM98_18430 CLM98_18430 IPR037066 CLM98_18430 CLM98_18435 IPR002410 Peptidase S33 CLM98_18435 IPR022742 Putative lysophospholipase CLM98_18435 IPR029058 Alpha/Beta hydrolase fold CLM98_18440 IPR005474 Transketolase, N-terminal CLM98_18440 IPR005475 Transketolase-like, pyrimidine-binding domain CLM98_18440 IPR005478 Transketolase, bacterial-like CLM98_18440 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLM98_18440 IPR020826 Transketolase binding site CLM98_18440 IPR029061 Thiamin diphosphate-binding fold CLM98_18440 IPR033248 CLM98_18440 CLM98_18445 IPR001991 Sodium:dicarboxylate symporter CLM98_18445 IPR036458 CLM98_18445 CLM98_18455 IPR025738 Aerotolerance-related protein BatD CLM98_18460 IPR001440 Tetratricopeptide TPR1 CLM98_18460 IPR002035 von Willebrand factor, type A CLM98_18460 IPR011990 Tetratricopeptide-like helical domain CLM98_18460 IPR019734 Tetratricopeptide repeat CLM98_18460 IPR036465 CLM98_18460 CLM98_18465 IPR002035 von Willebrand factor, type A CLM98_18465 IPR036465 CLM98_18465 CLM98_18470 IPR025489 Protein of unknown function (DUF4381 CLM98_18475 IPR002881 Domain of unknown function DUF58 CLM98_18480 IPR003593 AAA+ ATPase domain CLM98_18480 IPR011703 ATPase, AAA-3 CLM98_18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18495 IPR007446 Pilus assembly protein PilP CLM98_18500 IPR007445 Pilus assembly protein, PilO CLM98_18500 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLM98_18505 IPR007813 Fimbrial assembly PilN CLM98_18510 IPR005883 Type IV pilus assembly protein PilM CLM98_18515 IPR001264 Glycosyl transferase, family 51 CLM98_18515 IPR001460 Penicillin-binding protein, transpeptidase CLM98_18515 IPR012338 Beta-lactamase/transpeptidase-like CLM98_18515 IPR023346 Lysozyme-like domain CLM98_18515 IPR031376 CLM98_18515 CLM98_18515 IPR036950 CLM98_18515 CLM98_18525 IPR002020 Citrate synthase-like CLM98_18525 IPR010953 Citrate synthase, type I CLM98_18525 IPR016142 Citrate synthase-like, large alpha subdomain CLM98_18525 IPR016143 Citrate synthase-like, small alpha subdomain CLM98_18525 IPR019810 Citrate synthase active site CLM98_18525 IPR024176 Citrate synthase, bacterial-type CLM98_18525 IPR036969 CLM98_18525 CLM98_18530 IPR002150 Ribosomal protein L31 CLM98_18530 IPR027493 Ribosomal protein L31 type B CLM98_18530 IPR034704 CLM98_18530 CLM98_18535 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLM98_18535 IPR036452 CLM98_18535 CLM98_18540 IPR001650 Helicase, C-terminal CLM98_18540 IPR004609 ATP-dependent DNA helicase RecG CLM98_18540 IPR011545 DEAD/DEAH box helicase domain CLM98_18540 IPR012340 Nucleic acid-binding, OB-fold CLM98_18540 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_18540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18540 IPR033454 CLM98_18540 CLM98_18545 IPR006056 Enamine/imine deaminase YjgF-like CLM98_18545 IPR006175 YjgF/Yer057p/UK114 family CLM98_18545 IPR035959 CLM98_18545 CLM98_18550 IPR002912 ACT domain CLM98_18550 IPR003607 HD/PDEase domain CLM98_18550 IPR004095 TGS CLM98_18550 IPR004811 RelA/SpoT family CLM98_18550 IPR007685 RelA/SpoT CLM98_18550 IPR012675 Beta-grasp domain CLM98_18550 IPR012676 TGS-like CLM98_18555 IPR003716 DNA-directed RNA polymerase, omega subunit CLM98_18555 IPR006110 RNA polymerase, subunit omega/K/RPB6 CLM98_18555 IPR012293 RNA polymerase subunit, RPB6/omega CLM98_18555 IPR036161 CLM98_18555 CLM98_18560 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLM98_18560 IPR017665 Guanylate kinase CLM98_18560 IPR020590 Guanylate kinase, conserved site CLM98_18560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18565 IPR005229 Conserved hypothetical protein CHP00255 CLM98_18565 IPR013527 YicC-like, N-terminal CLM98_18565 IPR013551 Domain of unknown function DUF1732 CLM98_18570 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLM98_18570 IPR002381 Ribonuclease phosphorolytic, bacterial-type CLM98_18570 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLM98_18570 IPR018336 Ribonuclease PH, conserved site CLM98_18570 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_18570 IPR027408 PNPase/RNase PH domain CLM98_18570 IPR036345 CLM98_18570 CLM98_18575 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_18575 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_18580 IPR002637 Ham1-like protein CLM98_18580 IPR020922 Non-canonical purine NTP pyrophosphatase CLM98_18580 IPR029001 Inosine triphosphate pyrophosphatase-like CLM98_18585 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related CLM98_18585 IPR006638 Elongator protein 3/MiaB/NifB CLM98_18585 IPR007197 Radical SAM CLM98_18585 IPR010723 HemN, C-terminal domain CLM98_18585 IPR023404 Radical SAM, alpha/beta horseshoe CLM98_18590 IPR012434 Protein of unknown function DUF1631 CLM98_18595 IPR009875 PilZ domain CLM98_18600 IPR000994 Peptidase M24, structural domain CLM98_18600 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLM98_18600 IPR022846 Xaa-Pro dipeptidase CLM98_18600 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_18600 IPR036005 CLM98_18600 CLM98_18610 IPR000994 Peptidase M24, structural domain CLM98_18610 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_18610 IPR007865 Aminopeptidase P, N-terminal CLM98_18610 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLM98_18610 IPR036005 CLM98_18610 CLM98_18615 IPR011978 Uncharacterised protein family UPF0149 CLM98_18615 IPR036255 CLM98_18615 CLM98_18620 IPR012662 Conserved hypothetical protein CHP02449 CLM98_18625 IPR007838 Cell division protein ZapA-like CLM98_18625 IPR036192 CLM98_18625 CLM98_18635 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLM98_18635 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLM98_18635 IPR037171 CLM98_18635 CLM98_18640 IPR002740 EVE domain CLM98_18640 IPR015947 PUA-like domain CLM98_18645 IPR004788 Ribose 5-phosphate isomerase, type A CLM98_18645 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CLM98_18645 IPR037171 CLM98_18645 CLM98_18650 IPR003795 Protein of unknown function DUF192 CLM98_18650 IPR038695 CLM98_18650 CLM98_18655 IPR011990 Tetratricopeptide-like helical domain CLM98_18655 IPR032698 CLM98_18655 CLM98_18660 IPR018527 Rubredoxin, iron-binding site CLM98_18660 IPR024922 Rubredoxin CLM98_18660 IPR024935 Rubredoxin domain CLM98_18665 IPR013785 Aldolase-type TIM barrel CLM98_18665 IPR022998 Thiamin phosphate synthase superfamily CLM98_18665 IPR034291 CLM98_18665 CLM98_18665 IPR036206 CLM98_18665 CLM98_18680 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CLM98_18680 IPR005814 Aminotransferase class-III CLM98_18680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_18680 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_18680 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18685 IPR000792 Transcription regulator LuxR, C-terminal CLM98_18685 IPR003593 AAA+ ATPase domain CLM98_18685 IPR011990 Tetratricopeptide-like helical domain CLM98_18685 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_18685 IPR019734 Tetratricopeptide repeat CLM98_18685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18685 IPR036388 CLM98_18685 CLM98_18690 IPR000923 Blue (type 1) copper domain CLM98_18690 IPR008972 Cupredoxin CLM98_18690 IPR014068 Azurin, proteobacteria CLM98_18690 IPR028871 Blue (type 1) copper protein, binding site CLM98_18695 IPR004839 Aminotransferase, class I/classII CLM98_18695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_18695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_18695 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18700 IPR006175 YjgF/Yer057p/UK114 family CLM98_18700 IPR019897 YjgF-like protein, conserved site CLM98_18700 IPR035959 CLM98_18700 CLM98_18705 IPR009056 Cytochrome c-like domain CLM98_18705 IPR036909 CLM98_18705 CLM98_18710 IPR002937 Amine oxidase CLM98_18710 IPR036188 CLM98_18710 CLM98_18715 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18715 IPR012910 TonB-dependent receptor, plug CLM98_18715 IPR036942 CLM98_18715 CLM98_18715 IPR037066 CLM98_18715 CLM98_18720 IPR006439 HAD hydrolase, subfamily IA CLM98_18720 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_18720 IPR023214 HAD-like domain CLM98_18720 IPR036412 CLM98_18720 CLM98_18725 IPR004636 Acetylornithine/Succinylornithine transaminase family CLM98_18725 IPR005814 Aminotransferase class-III CLM98_18725 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_18725 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_18725 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_18730 IPR005821 Ion transport domain CLM98_18730 IPR028325 Voltage-gated potassium channel CLM98_18740 IPR002347 Glucose/ribitol dehydrogenase CLM98_18740 IPR036291 CLM98_18740 CLM98_18745 IPR011009 Protein kinase-like domain CLM98_18750 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLM98_18750 IPR025902 LssY-like C-terminal domain CLM98_18750 IPR032816 CLM98_18750 CLM98_18750 IPR036938 CLM98_18750 CLM98_18755 IPR021134 Bestrophin/UPF0187 CLM98_18760 IPR003111 Peptidase S16, lon N-terminal CLM98_18760 IPR015947 PUA-like domain CLM98_18765 IPR000713 Mur ligase, N-terminal CLM98_18765 IPR004101 Mur ligase, C-terminal CLM98_18765 IPR005757 Murein peptide ligase CLM98_18765 IPR013221 Mur ligase, central CLM98_18765 IPR036565 CLM98_18765 CLM98_18765 IPR036615 CLM98_18765 CLM98_18770 IPR000850 Adenylate kinase/UMP-CMP kinase CLM98_18770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_18770 IPR033690 CLM98_18770 CLM98_18775 IPR000023 Phosphofructokinase domain CLM98_18775 IPR011404 Phosphofructokinase, XF0274 CLM98_18775 IPR022953 Phosphofructokinase CLM98_18775 IPR035966 CLM98_18775 CLM98_18785 IPR004131 Pyrophosphate-energised proton pump CLM98_18795 IPR008162 Inorganic pyrophosphatase CLM98_18795 IPR036649 CLM98_18795 CLM98_18800 IPR011006 CheY-like superfamily CLM98_18800 IPR013976 Metal-dependent hydrolase HDOD CLM98_18800 IPR014626 Signal transduction response regulator, modified HD-GYP domain-containing, putative CLM98_18805 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18805 IPR012910 TonB-dependent receptor, plug CLM98_18805 IPR036942 CLM98_18805 CLM98_18805 IPR037066 CLM98_18805 CLM98_18810 IPR009057 Homeodomain-like CLM98_18810 IPR018060 DNA binding HTH domain, AraC-type CLM98_18810 IPR018062 HTH domain AraC-type, conserved site CLM98_18815 IPR001867 Signal transduction response regulator, C-terminal CLM98_18815 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_18815 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CLM98_18815 IPR011659 WD40-like Beta Propeller CLM98_18815 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_18815 IPR036388 CLM98_18815 CLM98_18820 IPR002817 Thiamine biosynthesis protein ThiC CLM98_18820 IPR025747 ThiC-associated domain CLM98_18820 IPR037509 CLM98_18820 CLM98_18820 IPR038521 CLM98_18820 CLM98_18830 IPR000531 TonB-dependent receptor, beta-barrel CLM98_18830 IPR012910 TonB-dependent receptor, plug CLM98_18830 IPR037066 CLM98_18830 CLM98_18835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_18835 IPR004090 Chemotaxis methyl-accepting receptor CLM98_18840 IPR000101 Gamma-glutamyltranspeptidase CLM98_18840 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_18845 IPR000506 Acetohydroxy acid isomeroreductase C-terminal CLM98_18845 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_18845 IPR013023 Acetohydroxy acid isomeroreductase CLM98_18845 IPR013116 Acetohydroxy acid isomeroreductase, catalytic CLM98_18845 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria CLM98_18845 IPR036291 CLM98_18845 CLM98_18850 IPR000399 TPP-binding enzyme, conserved site CLM98_18850 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLM98_18850 IPR012000 Thiamine pyrophosphate enzyme, central domain CLM98_18850 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLM98_18850 IPR012846 Acetolactate synthase, large subunit, biosynthetic CLM98_18850 IPR029035 DHS-like NAD/FAD-binding domain CLM98_18850 IPR029061 Thiamin diphosphate-binding fold CLM98_18860 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_18860 IPR036052 CLM98_18860 CLM98_18865 IPR000891 Pyruvate carboxyltransferase CLM98_18865 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CLM98_18865 IPR005671 2-isopropylmalate synthase, bacterial-type CLM98_18865 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CLM98_18865 IPR013785 Aldolase-type TIM barrel CLM98_18865 IPR036230 CLM98_18865 CLM98_18870 IPR004429 Isopropylmalate dehydrogenase CLM98_18870 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLM98_18870 IPR024084 Isopropylmalate dehydrogenase-like domain CLM98_18875 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CLM98_18875 IPR004431 3-isopropylmalate dehydratase, small subunit CLM98_18875 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLM98_18880 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CLM98_18880 IPR004430 3-isopropylmalate dehydratase, large subunit CLM98_18880 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLM98_18880 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLM98_18880 IPR036008 CLM98_18880 CLM98_18885 IPR000847 Transcription regulator HTH, LysR CLM98_18885 IPR005119 LysR, substrate-binding CLM98_18885 IPR036388 CLM98_18885 CLM98_18885 IPR036390 CLM98_18885 CLM98_18890 IPR000160 GGDEF domain CLM98_18890 IPR011110 Two component regulator propeller CLM98_18890 IPR011123 Two component regulator three Y CLM98_18890 IPR013783 Immunoglobulin-like fold CLM98_18890 IPR015943 WD40/YVTN repeat-like-containing domain CLM98_18890 IPR029787 Nucleotide cyclase CLM98_18895 IPR001647 DNA-binding HTH domain, TetR-type CLM98_18895 IPR009057 Homeodomain-like CLM98_18895 IPR036271 CLM98_18895 CLM98_18895 IPR039536 CLM98_18895 CLM98_18900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_18905 IPR003423 Outer membrane efflux protein CLM98_18905 IPR010130 Type I secretion outer membrane protein, TolC CLM98_18910 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CLM98_18910 IPR038107 CLM98_18910 CLM98_18920 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLM98_18920 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CLM98_18925 IPR007016 O-antigen ligase-related CLM98_18930 IPR001296 Glycosyl transferase, family 1 CLM98_18930 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLM98_18935 IPR019401 Zinc finger, CHCC-type CLM98_18940 IPR005887 Alpha-1,2-mannosidase, putative CLM98_18940 IPR008928 Six-hairpin glycosidase-like CLM98_18940 IPR012939 Glycosyl hydrolase family 92 CLM98_18940 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_18945 IPR002505 Phosphate acetyl/butaryl transferase CLM98_18945 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase CLM98_18945 IPR012301 Malic enzyme, N-terminal domain CLM98_18945 IPR012302 Malic enzyme, NAD-binding CLM98_18945 IPR036291 CLM98_18945 CLM98_18945 IPR037062 CLM98_18945 CLM98_18950 IPR001991 Sodium:dicarboxylate symporter CLM98_18950 IPR018107 Sodium:dicarboxylate symporter, conserved site CLM98_18950 IPR023954 C4-dicarboxylate transport protein CLM98_18950 IPR036458 CLM98_18950 CLM98_18955 IPR010870 Phosphate-selective porin O/P CLM98_18955 IPR023614 Porin domain CLM98_18965 IPR001789 Signal transduction response regulator, receiver domain CLM98_18965 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_18965 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_18965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_18965 IPR011006 CheY-like superfamily CLM98_18965 IPR029151 Periplasmic sensor domain-like CLM98_18965 IPR033479 CLM98_18965 CLM98_18965 IPR035965 CLM98_18965 CLM98_18965 IPR036097 CLM98_18965 CLM98_18965 IPR036890 CLM98_18965 CLM98_18970 IPR005828 General substrate transporter CLM98_18970 IPR005829 Sugar transporter, conserved site CLM98_18970 IPR036259 CLM98_18970 CLM98_18980 IPR000847 Transcription regulator HTH, LysR CLM98_18980 IPR005119 LysR, substrate-binding CLM98_18980 IPR036388 CLM98_18980 CLM98_18980 IPR036390 CLM98_18980 CLM98_18990 IPR023210 NADP-dependent oxidoreductase domain CLM98_18990 IPR036812 CLM98_18990 CLM98_18995 IPR032710 CLM98_18995 CLM98_18995 IPR037401 CLM98_18995 CLM98_19000 IPR020955 Uncharacterised protein family Atu4866 CLM98_19000 IPR038646 CLM98_19000 CLM98_19005 IPR000792 Transcription regulator LuxR, C-terminal CLM98_19005 IPR001789 Signal transduction response regulator, receiver domain CLM98_19005 IPR011006 CheY-like superfamily CLM98_19005 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_19015 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_19015 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_19015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_19015 IPR013727 Two-component sensor kinase N-terminal CLM98_19015 IPR036097 CLM98_19015 CLM98_19015 IPR036890 CLM98_19015 CLM98_19020 IPR001789 Signal transduction response regulator, receiver domain CLM98_19020 IPR001867 Signal transduction response regulator, C-terminal CLM98_19020 IPR011006 CheY-like superfamily CLM98_19020 IPR036388 CLM98_19020 CLM98_19025 IPR010870 Phosphate-selective porin O/P CLM98_19025 IPR023614 Porin domain CLM98_19035 IPR004680 Citrate transporter-like domain CLM98_19035 IPR014738 Citrate transporter CLM98_19040 IPR002347 Glucose/ribitol dehydrogenase CLM98_19040 IPR011283 Acetoacetyl-CoA reductase CLM98_19040 IPR036291 CLM98_19040 CLM98_19045 IPR000843 Transcription regulator HTH, LacI CLM98_19045 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_19045 IPR028082 Periplasmic binding protein-like I CLM98_19050 IPR011701 Major facilitator superfamily CLM98_19050 IPR036259 CLM98_19050 CLM98_19055 IPR000531 TonB-dependent receptor, beta-barrel CLM98_19055 IPR012910 TonB-dependent receptor, plug CLM98_19055 IPR036942 CLM98_19055 CLM98_19055 IPR037066 CLM98_19055 CLM98_19060 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLM98_19060 IPR013780 Glycosyl hydrolase, family 13, all-beta CLM98_19060 IPR017853 Glycoside hydrolase, superfamily CLM98_19065 IPR002818 ThiJ/PfpI CLM98_19065 IPR029062 Class I glutamine amidotransferase-like CLM98_19070 IPR012548 Protein of unknown function DUF1704 CLM98_19070 IPR012656 Conserved hypothetical protein CHP02421, QEGLA CLM98_19075 IPR004881 Ribosome biogenesis GTPase RsgA, putative CLM98_19075 IPR010914 EngC GTPase CLM98_19075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19080 IPR004839 Aminotransferase, class I/classII CLM98_19080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_19080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_19080 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_19085 IPR013830 CLM98_19085 CLM98_19085 IPR036514 CLM98_19085 CLM98_19090 IPR013217 Methyltransferase type 12 CLM98_19090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_19105 IPR000531 TonB-dependent receptor, beta-barrel CLM98_19105 IPR010105 TonB-dependent siderophore receptor CLM98_19105 IPR010917 TonB-dependent receptor, conserved site CLM98_19105 IPR012910 TonB-dependent receptor, plug CLM98_19105 IPR036942 CLM98_19105 CLM98_19105 IPR037066 CLM98_19105 CLM98_19110 IPR002509 Polysaccharide deacetylase CLM98_19110 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLM98_19115 IPR001763 Rhodanese-like domain CLM98_19115 IPR002109 Glutaredoxin CLM98_19115 IPR004480 Monothiol glutaredoxin-related CLM98_19115 IPR035903 CLM98_19115 CLM98_19115 IPR036249 CLM98_19115 CLM98_19115 IPR036873 CLM98_19115 CLM98_19125 IPR010323 Protein of unknown function DUF924 CLM98_19125 IPR011990 Tetratricopeptide-like helical domain CLM98_19145 IPR008979 Galactose-binding domain-like CLM98_19145 IPR011013 Galactose mutarotase-like domain CLM98_19145 IPR013784 Carbohydrate-binding-like fold CLM98_19145 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_19145 IPR015364 Rhamnogalacturonase B, N-terminal CLM98_19145 IPR016590 Rhamnogalacturonase B CLM98_19145 IPR029411 Rhamnogalacturonan lyase, domain III CLM98_19145 IPR029413 Rhamnogalacturonan lyase, domain II CLM98_19155 IPR003797 DegV CLM98_19160 IPR023635 Peptide deformylase CLM98_19160 IPR036821 CLM98_19160 CLM98_19170 IPR006659 Arsenate reductase CLM98_19170 IPR006660 Arsenate reductase-like CLM98_19170 IPR036249 CLM98_19170 CLM98_19180 IPR003137 Protease-associated domain, PA CLM98_19190 IPR003921 Cellulose synthase, subunit C CLM98_19190 IPR008410 Cellulose synthase operon C, C-terminal CLM98_19190 IPR011990 Tetratricopeptide-like helical domain CLM98_19190 IPR019734 Tetratricopeptide repeat CLM98_19195 IPR002037 Glycoside hydrolase, family 8 CLM98_19195 IPR008928 Six-hairpin glycosidase-like CLM98_19195 IPR012341 Six-hairpin glycosidase CLM98_19200 IPR003920 Cellulose synthase, subunit B CLM98_19200 IPR008979 Galactose-binding domain-like CLM98_19200 IPR018513 Cellulose synthase BcsB, bacterial CLM98_19205 IPR001173 Glycosyltransferase 2-like CLM98_19205 IPR003919 Cellulose synthase, subunit A CLM98_19205 IPR009875 PilZ domain CLM98_19205 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19215 IPR038470 CLM98_19215 CLM98_19220 IPR006406 Nicotinate phosphoribosyltransferase CLM98_19220 IPR007229 Nicotinate phosphoribosyltransferase family CLM98_19220 IPR036068 CLM98_19220 CLM98_19230 IPR017853 Glycoside hydrolase, superfamily CLM98_19240 IPR007831 General secretory system II, protein E, N-terminal CLM98_19240 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19240 IPR037257 CLM98_19240 CLM98_19250 IPR001173 Glycosyltransferase 2-like CLM98_19250 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19260 IPR002575 Aminoglycoside phosphotransferase CLM98_19260 IPR011009 Protein kinase-like domain CLM98_19270 IPR006419 Nicotinamide mononucleotide transporter PnuC CLM98_19275 IPR000524 Transcription regulator HTH, GntR CLM98_19275 IPR011663 UbiC transcription regulator-associated CLM98_19275 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLM98_19275 IPR036388 CLM98_19275 CLM98_19275 IPR036390 CLM98_19275 CLM98_19280 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19285 IPR001775 GspD/PilQ family CLM98_19285 IPR004845 Type II secretion system GspD, conserved site CLM98_19285 IPR004846 Type II/III secretion system CLM98_19285 IPR005644 NolW-like CLM98_19285 IPR013356 Type II secretion system GspD CLM98_19285 IPR038591 CLM98_19285 CLM98_19295 IPR034756 CLM98_19295 CLM98_19300 IPR007813 Fimbrial assembly PilN CLM98_19305 IPR005628 General secretion pathway protein K CLM98_19305 IPR038072 CLM98_19305 CLM98_19310 IPR012902 Prokaryotic N-terminal methylation site CLM98_19315 IPR012902 Prokaryotic N-terminal methylation site CLM98_19320 IPR002416 Type II secretion system protein H CLM98_19320 IPR022346 General secretion pathway, GspH CLM98_19325 IPR000983 Bacterial general secretion pathway protein G-type pilin CLM98_19325 IPR010054 General secretion pathway protein G CLM98_19325 IPR012902 Prokaryotic N-terminal methylation site CLM98_19325 IPR013545 Type II secretion system protein G CLM98_19330 IPR001992 Type II secretion system conserved site CLM98_19330 IPR003004 GspF/PilC family CLM98_19330 IPR018076 Type II secretion system F domain CLM98_19340 IPR001482 Type II secretion system protein E CLM98_19340 IPR003593 AAA+ ATPase domain CLM98_19340 IPR007831 General secretory system II, protein E, N-terminal CLM98_19340 IPR013369 Type II secretion system GspE CLM98_19340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19340 IPR037257 CLM98_19340 CLM98_19345 IPR000209 Peptidase S8/S53 domain CLM98_19345 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_19345 IPR015500 Peptidase S8, subtilisin-related CLM98_19345 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_19345 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_19345 IPR036852 CLM98_19345 CLM98_19350 IPR008635 Coiled stalk of trimeric autotransporter adhesin CLM98_19350 IPR008640 Head domain of trimeric autotransporter adhesin CLM98_19350 IPR011049 Serralysin-like metalloprotease, C-terminal CLM98_19350 IPR024973 ESPR domain CLM98_19355 IPR000209 Peptidase S8/S53 domain CLM98_19355 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLM98_19355 IPR015500 Peptidase S8, subtilisin-related CLM98_19355 IPR023827 Peptidase S8, subtilisin, Asp-active site CLM98_19355 IPR023828 Peptidase S8, subtilisin, Ser-active site CLM98_19355 IPR036852 CLM98_19355 CLM98_19360 IPR005594 YadA-like, C-terminal CLM98_19360 IPR008635 Coiled stalk of trimeric autotransporter adhesin CLM98_19360 IPR008640 Head domain of trimeric autotransporter adhesin CLM98_19360 IPR011049 Serralysin-like metalloprotease, C-terminal CLM98_19370 IPR010073 Phosphoribosylformylglycinamidine synthase CLM98_19370 IPR010918 AIR synthase-related protein, C-terminal domain CLM98_19370 IPR029062 Class I glutamine amidotransferase-like CLM98_19370 IPR036604 CLM98_19370 CLM98_19370 IPR036676 CLM98_19370 CLM98_19370 IPR036921 CLM98_19370 CLM98_19385 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CLM98_19385 IPR012336 Thioredoxin-like fold CLM98_19385 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLM98_19385 IPR036249 CLM98_19385 CLM98_19400 IPR002104 Integrase, catalytic CLM98_19400 IPR004107 Integrase, SAM-like, N-terminal CLM98_19400 IPR010998 Integrase, Lambda-type, N-terminal CLM98_19400 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_19400 IPR011932 Tyrosine recombinase XerD CLM98_19400 IPR013762 Integrase-like, catalytic core CLM98_19400 IPR023009 Tyrosine recombinase XerC/XerD CLM98_19405 IPR010432 RDD CLM98_19415 IPR005495 Permease YjgP/YjgQ, predicted CLM98_19415 IPR030923 CLM98_19415 CLM98_19420 IPR005495 Permease YjgP/YjgQ, predicted CLM98_19420 IPR030922 CLM98_19420 CLM98_19425 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CLM98_19425 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CLM98_19425 IPR011356 Leucine aminopeptidase/peptidase B CLM98_19425 IPR023042 Peptidase M17, leucine aminopeptidase CLM98_19435 IPR007459 DNA polymerase III chi subunit, HolC CLM98_19435 IPR036768 CLM98_19435 CLM98_19440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_19440 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLM98_19440 IPR002303 Valine-tRNA ligase CLM98_19440 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLM98_19440 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_19440 IPR010978 tRNA-binding arm CLM98_19440 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLM98_19440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19440 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CLM98_19440 IPR037118 CLM98_19440 CLM98_19445 IPR000531 TonB-dependent receptor, beta-barrel CLM98_19445 IPR012910 TonB-dependent receptor, plug CLM98_19445 IPR037066 CLM98_19445 CLM98_19450 IPR008258 Lytic transglycosylase-like SLT domain CLM98_19450 IPR008939 Lytic transglycosylase, superhelical U-shaped CLM98_19450 IPR012289 Lytic transglycosylase, superhelical linker CLM98_19450 IPR023346 Lysozyme-like domain CLM98_19455 IPR002022 Pectate lyase/Amb allergen CLM98_19455 IPR011050 Pectin lyase fold/virulence factor CLM98_19455 IPR012334 Pectin lyase fold CLM98_19460 IPR000182 GNAT domain CLM98_19460 IPR006464 Ribosomal-protein-alanine acetyltransferase CLM98_19460 IPR016181 Acyl-CoA N-acyltransferase CLM98_19465 IPR036654 CLM98_19465 CLM98_19470 IPR000462 CDP-alcohol phosphatidyltransferase CLM98_19470 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CLM98_19475 IPR025392 Domain of unknown function DUF4124 CLM98_19480 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLM98_19480 IPR002316 Proline-tRNA ligase, class IIa CLM98_19480 IPR004154 Anticodon-binding CLM98_19480 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CLM98_19480 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLM98_19480 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CLM98_19480 IPR036621 CLM98_19480 CLM98_19480 IPR036754 CLM98_19480 CLM98_19485 IPR001801 Histone-like protein H-NS CLM98_19485 IPR027444 Histone-like protein H-NS, C-terminal domain CLM98_19485 IPR037150 CLM98_19485 CLM98_19490 IPR010619 Domain of unknown function DUF1212 CLM98_19490 IPR024528 Domain of unknown function DUF3815 CLM98_19495 IPR003453 Permease domain CLM98_19495 IPR030802 CLM98_19495 CLM98_19500 IPR003439 ABC transporter-like CLM98_19500 IPR003593 AAA+ ATPase domain CLM98_19500 IPR017871 ABC transporter, conserved site CLM98_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19505 IPR003399 Mammalian cell entry-related CLM98_19510 IPR005586 Protein of unknown function DUF330 CLM98_19515 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CLM98_19515 IPR037151 CLM98_19515 CLM98_19520 IPR036188 CLM98_19520 CLM98_19525 IPR007739 Rhamnan synthesis F CLM98_19525 IPR032719 CLM98_19525 CLM98_19530 IPR004164 Coenzyme A transferase active site CLM98_19530 IPR004165 Coenzyme A transferase family I CLM98_19530 IPR012791 3-oxoacid CoA-transferase, subunit B CLM98_19530 IPR037171 CLM98_19530 CLM98_19535 IPR004163 Coenzyme A transferase binding site CLM98_19535 IPR004165 Coenzyme A transferase family I CLM98_19535 IPR012792 3-oxoacid CoA-transferase, subunit A CLM98_19535 IPR037171 CLM98_19535 CLM98_19540 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_19540 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_19540 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_19540 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_19540 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_19540 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_19540 IPR016066 Alpha-D-phosphohexomutase, conserved site CLM98_19540 IPR036900 CLM98_19540 CLM98_19545 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CLM98_19545 IPR005835 Nucleotidyl transferase CLM98_19545 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CLM98_19545 IPR011051 RmlC-like cupin domain CLM98_19545 IPR014710 RmlC-like jelly roll fold CLM98_19545 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19555 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLM98_19555 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_19555 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLM98_19555 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLM98_19555 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLM98_19555 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CLM98_19555 IPR036220 CLM98_19555 CLM98_19555 IPR036291 CLM98_19555 CLM98_19560 IPR005913 dTDP-4-dehydrorhamnose reductase CLM98_19560 IPR029903 CLM98_19560 CLM98_19560 IPR036291 CLM98_19560 CLM98_19565 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CLM98_19565 IPR011051 RmlC-like cupin domain CLM98_19565 IPR014710 RmlC-like jelly roll fold CLM98_19570 IPR005835 Nucleotidyl transferase CLM98_19570 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CLM98_19570 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19575 IPR005888 dTDP-glucose 4,6-dehydratase CLM98_19575 IPR016040 NAD(P)-binding domain CLM98_19575 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_19575 IPR036291 CLM98_19575 CLM98_19580 IPR012255 Electron transfer flavoprotein, beta subunit CLM98_19580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19580 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLM98_19585 IPR001308 Electron transfer flavoprotein, alpha subunit CLM98_19585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_19585 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLM98_19585 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLM98_19585 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CLM98_19585 IPR029035 DHS-like NAD/FAD-binding domain CLM98_19590 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CLM98_19595 IPR000537 UbiA prenyltransferase family CLM98_19595 IPR023214 HAD-like domain CLM98_19595 IPR036412 CLM98_19595 CLM98_19600 IPR006094 FAD linked oxidase, N-terminal CLM98_19600 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLM98_19600 IPR036318 CLM98_19600 CLM98_19605 IPR002347 Glucose/ribitol dehydrogenase CLM98_19605 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_19605 IPR036291 CLM98_19605 CLM98_19615 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_19615 IPR036291 CLM98_19615 CLM98_19620 IPR002937 Amine oxidase CLM98_19620 IPR036188 CLM98_19620 CLM98_19625 IPR007267 GtrA-like protein CLM98_19635 IPR008775 Phytanoyl-CoA dioxygenase CLM98_19645 IPR001173 Glycosyltransferase 2-like CLM98_19645 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19655 IPR003439 ABC transporter-like CLM98_19655 IPR003593 AAA+ ATPase domain CLM98_19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19655 IPR029439 Wzt, C-terminal CLM98_19660 IPR000412 ABC-2 transporter CLM98_19660 IPR013525 ABC-2 type transporter CLM98_19665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLM98_19665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLM98_19665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLM98_19665 IPR015424 Pyridoxal phosphate-dependent transferase CLM98_19670 IPR000644 CBS domain CLM98_19670 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLM98_19670 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_19670 IPR036052 CLM98_19670 CLM98_19675 IPR007420 Protein of unknown function DUF465 CLM98_19680 IPR036737 CLM98_19680 CLM98_19685 IPR025511 Domain of unknown function DUF4398 CLM98_19690 IPR001482 Type II secretion system protein E CLM98_19690 IPR006321 Pilus retraction protein PilT CLM98_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19700 IPR004045 Glutathione S-transferase, N-terminal CLM98_19700 IPR005955 Maleylacetoacetate isomerase CLM98_19700 IPR036249 CLM98_19700 CLM98_19700 IPR036282 CLM98_19700 CLM98_19705 IPR011234 Fumarylacetoacetase, C-terminal-related CLM98_19705 IPR036663 CLM98_19705 CLM98_19715 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLM98_19715 IPR001650 Helicase, C-terminal CLM98_19715 IPR011545 DEAD/DEAH box helicase domain CLM98_19715 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19725 IPR000531 TonB-dependent receptor, beta-barrel CLM98_19725 IPR012910 TonB-dependent receptor, plug CLM98_19725 IPR037066 CLM98_19725 CLM98_19735 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLM98_19735 IPR038418 CLM98_19735 CLM98_19740 IPR018968 Phasin CLM98_19745 IPR004472 Dethiobiotin synthase BioD CLM98_19745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19750 IPR000614 Free Met sulfoxide reductase conserved site CLM98_19750 IPR003018 GAF domain CLM98_19750 IPR029016 GAF domain-like CLM98_19760 IPR000801 Putative esterase CLM98_19760 IPR029058 Alpha/Beta hydrolase fold CLM98_19765 IPR000531 TonB-dependent receptor, beta-barrel CLM98_19765 IPR010105 TonB-dependent siderophore receptor CLM98_19765 IPR010917 TonB-dependent receptor, conserved site CLM98_19765 IPR012910 TonB-dependent receptor, plug CLM98_19765 IPR036942 CLM98_19765 CLM98_19765 IPR037066 CLM98_19765 CLM98_19770 IPR006346 2-phosphoglycolate phosphatase, prokaryotic CLM98_19770 IPR006439 HAD hydrolase, subfamily IA CLM98_19770 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_19770 IPR023214 HAD-like domain CLM98_19770 IPR036412 CLM98_19770 CLM98_19770 IPR037512 CLM98_19770 CLM98_19775 IPR001126 DNA-repair protein, UmuC-like CLM98_19775 IPR017961 DNA polymerase, Y-family, little finger domain CLM98_19775 IPR022880 DNA polymerase IV CLM98_19775 IPR036775 CLM98_19775 CLM98_19780 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CLM98_19780 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_19780 IPR029069 HotDog domain CLM98_19785 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_19785 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_19785 IPR016039 Thiolase-like CLM98_19785 IPR018201 Beta-ketoacyl synthase, active site CLM98_19785 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_19795 IPR001567 Peptidase M3A/M3B CLM98_19795 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLM98_19800 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLM98_19800 IPR036052 CLM98_19800 CLM98_19810 IPR001117 Multicopper oxidase, type 1 CLM98_19810 IPR002355 Multicopper oxidase, copper-binding site CLM98_19810 IPR006376 Copper-resistance protein CopA CLM98_19810 IPR008972 Cupredoxin CLM98_19810 IPR011706 Multicopper oxidase, type 2 CLM98_19810 IPR011707 Multicopper oxidase, type 3 CLM98_19810 IPR033138 CLM98_19810 CLM98_19815 IPR007939 Copper resistance B precursor CLM98_19820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLM98_19820 IPR004361 Glyoxalase I CLM98_19820 IPR018146 Glyoxalase I, conserved site CLM98_19820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_19830 IPR002477 Peptidoglycan binding-like CLM98_19830 IPR023346 Lysozyme-like domain CLM98_19830 IPR036365 CLM98_19830 CLM98_19830 IPR036366 CLM98_19830 CLM98_19850 IPR001347 Sugar isomerase (SIS) CLM98_19850 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CLM98_19850 IPR029055 Nucleophile aminohydrolases, N-terminal CLM98_19855 IPR006143 RND efflux pump, membrane fusion protein CLM98_19855 IPR039562 CLM98_19855 CLM98_19860 IPR003439 ABC transporter-like CLM98_19860 IPR003593 AAA+ ATPase domain CLM98_19860 IPR017871 ABC transporter, conserved site CLM98_19860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19865 IPR003838 Permease FtsX-like CLM98_19865 IPR025857 MacB-like periplasmic core domain CLM98_19870 IPR003838 Permease FtsX-like CLM98_19870 IPR025857 MacB-like periplasmic core domain CLM98_19875 IPR036034 CLM98_19875 CLM98_19885 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_19885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_19885 IPR036097 CLM98_19885 CLM98_19885 IPR036890 CLM98_19885 CLM98_19890 IPR001451 Bacterial transferase hexapeptide repeat CLM98_19890 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CLM98_19890 IPR011004 Trimeric LpxA-like CLM98_19890 IPR018357 Hexapeptide transferase, conserved site CLM98_19890 IPR025877 MobA-like NTP transferase domain CLM98_19890 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_19895 IPR007267 GtrA-like protein CLM98_19900 IPR002701 Chorismate mutase CLM98_19900 IPR008240 Chorismate mutase, periplasmic CLM98_19900 IPR036263 CLM98_19900 CLM98_19905 IPR001469 ATPase, F1 complex, delta/epsilon subunit CLM98_19905 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal CLM98_19905 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain CLM98_19905 IPR036771 CLM98_19905 CLM98_19905 IPR036794 CLM98_19905 CLM98_19910 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_19910 IPR003593 AAA+ ATPase domain CLM98_19910 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLM98_19910 IPR005722 ATPase, F1 complex, beta subunit CLM98_19910 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_19910 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CLM98_19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19910 IPR036121 CLM98_19910 CLM98_19915 IPR000131 ATPase, F1 complex, gamma subunit CLM98_19915 IPR023632 ATPase, F1 complex, gamma subunit conserved site CLM98_19915 IPR035968 CLM98_19915 CLM98_19920 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_19920 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CLM98_19920 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLM98_19920 IPR005294 ATPase, F1 complex, alpha subunit CLM98_19920 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLM98_19920 IPR023366 ATP synthase subunit alpha-like domain CLM98_19920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_19920 IPR036121 CLM98_19920 CLM98_19920 IPR038376 CLM98_19920 CLM98_19925 IPR000711 ATPase, OSCP/delta subunit CLM98_19925 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CLM98_19930 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CLM98_19930 IPR005864 ATPase, F0 complex, subunit B, bacterial CLM98_19930 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLM98_19935 IPR000454 ATPase, F0 complex, subunit C CLM98_19935 IPR002379 V-ATPase proteolipid subunit C-like domain CLM98_19935 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast CLM98_19935 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CLM98_19935 IPR035921 CLM98_19935 CLM98_19935 IPR038662 CLM98_19935 CLM98_19940 IPR000568 ATPase, F0 complex, subunit A CLM98_19940 IPR023011 ATPase, F0 complex, subunit A, active site CLM98_19940 IPR035908 CLM98_19940 CLM98_19950 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_19960 IPR000089 Biotin/lipoyl attachment CLM98_19960 IPR001100 CLM98_19960 CLM98_19960 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_19960 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLM98_19960 IPR006258 Dihydrolipoamide dehydrogenase CLM98_19960 IPR011053 Single hybrid motif CLM98_19960 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLM98_19960 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLM98_19960 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_19960 IPR036188 CLM98_19960 CLM98_19970 IPR000089 Biotin/lipoyl attachment CLM98_19970 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLM98_19970 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLM98_19970 IPR004167 E3 binding CLM98_19970 IPR011053 Single hybrid motif CLM98_19970 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_19970 IPR036625 CLM98_19970 CLM98_19975 IPR021307 Protein of unknown function DUF2884 CLM98_19980 IPR005122 Uracil-DNA glycosylase-like CLM98_19980 IPR026353 Hypoxanthine-DNA glycosylase CLM98_19980 IPR036895 CLM98_19980 CLM98_19985 IPR005618 Outer membrane protein, OmpW CLM98_19985 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_20005 IPR004872 Lipoprotein NlpA family CLM98_20010 IPR000515 MetI-like domain CLM98_20010 IPR035906 CLM98_20010 CLM98_20015 IPR003439 ABC transporter-like CLM98_20015 IPR003593 AAA+ ATPase domain CLM98_20015 IPR017871 ABC transporter, conserved site CLM98_20015 IPR018449 NIL domain CLM98_20015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20020 IPR000620 Drug/metabolite transporter CLM98_20025 IPR007551 Protein of unknown function DUF520 CLM98_20025 IPR035570 CLM98_20025 CLM98_20025 IPR035571 CLM98_20025 CLM98_20025 IPR036183 CLM98_20025 CLM98_20035 IPR001789 Signal transduction response regulator, receiver domain CLM98_20035 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_20035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_20035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_20035 IPR011006 CheY-like superfamily CLM98_20035 IPR036097 CLM98_20035 CLM98_20035 IPR036890 CLM98_20035 CLM98_20040 IPR022742 Putative lysophospholipase CLM98_20040 IPR029058 Alpha/Beta hydrolase fold CLM98_20045 IPR009858 Protein of unknown function DUF1415 CLM98_20050 IPR002347 Glucose/ribitol dehydrogenase CLM98_20050 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20050 IPR036291 CLM98_20050 CLM98_20055 IPR006439 HAD hydrolase, subfamily IA CLM98_20055 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_20055 IPR023214 HAD-like domain CLM98_20055 IPR036412 CLM98_20055 CLM98_20060 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLM98_20060 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLM98_20060 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLM98_20060 IPR020103 Pseudouridine synthase, catalytic domain CLM98_20060 IPR036986 CLM98_20060 CLM98_20065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_20065 IPR007848 Methyltransferase small domain CLM98_20065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_20075 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_20075 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_20075 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_20080 IPR021649 Protein of unknown function DUF3247 CLM98_20085 IPR000014 PAS domain CLM98_20085 IPR001610 PAC motif CLM98_20085 IPR001789 Signal transduction response regulator, receiver domain CLM98_20085 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_20085 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_20085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_20085 IPR011006 CheY-like superfamily CLM98_20085 IPR013656 PAS fold-4 CLM98_20085 IPR035965 CLM98_20085 CLM98_20085 IPR036097 CLM98_20085 CLM98_20085 IPR036890 CLM98_20085 CLM98_20100 IPR021557 Protein of unknown function DUF3016 CLM98_20105 IPR000821 Alanine racemase CLM98_20105 IPR001608 Alanine racemase, N-terminal CLM98_20105 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_20105 IPR011079 Alanine racemase, C-terminal CLM98_20105 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CLM98_20105 IPR029066 PLP-binding barrel CLM98_20110 IPR006076 FAD dependent oxidoreductase CLM98_20110 IPR023080 D-amino acid dehydrogenase small subunit, DadA CLM98_20110 IPR036188 CLM98_20110 CLM98_20115 IPR000485 AsnC-type HTH domain CLM98_20115 IPR011008 Dimeric alpha-beta barrel CLM98_20115 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLM98_20115 IPR019887 Transcription regulator AsnC-type, C-terminal CLM98_20115 IPR019888 Transcription regulator AsnC-type CLM98_20115 IPR036388 CLM98_20115 CLM98_20115 IPR036390 CLM98_20115 CLM98_20125 IPR002579 Peptide methionine sulphoxide reductase MrsB CLM98_20125 IPR011057 Mss4-like CLM98_20130 IPR018660 C-type lysozyme, inhibitor CLM98_20130 IPR036328 CLM98_20130 CLM98_20135 IPR000540 Flagellar motor protein MotA, conserved site CLM98_20135 IPR002898 MotA/TolQ/ExbB proton channel CLM98_20135 IPR022522 Flagellar motor stator, MotA CLM98_20140 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_20140 IPR025713 Motility protein B, N-terminal domain CLM98_20140 IPR036737 CLM98_20140 CLM98_20150 IPR025109 Domain of unknown function DUF4031 CLM98_20160 IPR021724 Protein of unknown function DUF3297 CLM98_20170 IPR000412 ABC-2 transporter CLM98_20170 IPR013525 ABC-2 type transporter CLM98_20175 IPR003439 ABC transporter-like CLM98_20175 IPR003593 AAA+ ATPase domain CLM98_20175 IPR017871 ABC transporter, conserved site CLM98_20175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20180 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CLM98_20180 IPR004709 Na+/H+ exchanger CLM98_20180 IPR006153 Cation/H+ exchanger CLM98_20190 IPR000782 FAS1 domain CLM98_20190 IPR036378 CLM98_20190 CLM98_20195 IPR005122 Uracil-DNA glycosylase-like CLM98_20195 IPR005273 Uracil-DNA glycosylase, family 4 domain CLM98_20195 IPR023875 DNA metabolism protein, putative CLM98_20195 IPR025404 Domain of unknown function DUF4130 CLM98_20195 IPR036895 CLM98_20195 CLM98_20200 IPR006638 Elongator protein 3/MiaB/NifB CLM98_20200 IPR007197 Radical SAM CLM98_20200 IPR010994 RuvA domain 2-like CLM98_20200 IPR013785 Aldolase-type TIM barrel CLM98_20200 IPR023874 DNA modification/repair radical SAM protein, putative CLM98_20205 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLM98_20205 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type CLM98_20210 IPR032808 CLM98_20210 CLM98_20215 IPR000847 Transcription regulator HTH, LysR CLM98_20215 IPR005119 LysR, substrate-binding CLM98_20215 IPR036388 CLM98_20215 CLM98_20215 IPR036390 CLM98_20215 CLM98_20220 IPR001226 Flavodoxin, conserved site CLM98_20220 IPR005025 NADPH-dependent FMN reductase-like CLM98_20220 IPR029039 Flavoprotein-like CLM98_20225 IPR023210 NADP-dependent oxidoreductase domain CLM98_20225 IPR036812 CLM98_20225 CLM98_20235 IPR001173 Glycosyltransferase 2-like CLM98_20235 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_20245 IPR018713 Domain of unknown function DUF2236 CLM98_20260 IPR002293 Amino acid/polyamine transporter I CLM98_20270 IPR001789 Signal transduction response regulator, receiver domain CLM98_20270 IPR007492 LytTR DNA-binding domain CLM98_20270 IPR011006 CheY-like superfamily CLM98_20275 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_20275 IPR010559 Signal transduction histidine kinase, internal region CLM98_20275 IPR036890 CLM98_20275 CLM98_20280 IPR006076 FAD dependent oxidoreductase CLM98_20280 IPR006181 D-amino acid oxidase, conserved site CLM98_20300 IPR009078 Ferritin-like superfamily CLM98_20300 IPR010287 Domain of unknown function DUF892 CLM98_20300 IPR012347 Ferritin-related CLM98_20305 IPR007760 Manganese catalase CLM98_20305 IPR009078 Ferritin-like superfamily CLM98_20305 IPR012347 Ferritin-related CLM98_20315 IPR036590 CLM98_20315 CLM98_20325 IPR000014 PAS domain CLM98_20325 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLM98_20325 IPR000780 MCP methyltransferase, CheR-type CLM98_20325 IPR011102 Signal transduction histidine kinase, HWE region CLM98_20325 IPR013655 PAS fold-3 CLM98_20325 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CLM98_20325 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLM98_20325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_20325 IPR035909 CLM98_20325 CLM98_20325 IPR035965 CLM98_20325 CLM98_20325 IPR036890 CLM98_20325 CLM98_20330 IPR001789 Signal transduction response regulator, receiver domain CLM98_20330 IPR011006 CheY-like superfamily CLM98_20340 IPR001789 Signal transduction response regulator, receiver domain CLM98_20340 IPR002078 RNA polymerase sigma factor 54 interaction domain CLM98_20340 IPR002197 DNA binding HTH domain, Fis-type CLM98_20340 IPR003593 AAA+ ATPase domain CLM98_20340 IPR009057 Homeodomain-like CLM98_20340 IPR011006 CheY-like superfamily CLM98_20340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLM98_20340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20355 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CLM98_20360 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CLM98_20375 IPR002347 Glucose/ribitol dehydrogenase CLM98_20375 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20375 IPR036291 CLM98_20375 CLM98_20380 IPR005886 UDP-glucose 4-epimerase GalE CLM98_20380 IPR016040 NAD(P)-binding domain CLM98_20380 IPR036291 CLM98_20380 CLM98_20390 IPR004379 UDP-galactopyranose mutase CLM98_20390 IPR015899 UDP-galactopyranose mutase, C-terminal CLM98_20395 IPR017853 Glycoside hydrolase, superfamily CLM98_20400 IPR003439 ABC transporter-like CLM98_20400 IPR003593 AAA+ ATPase domain CLM98_20400 IPR011527 ABC transporter type 1, transmembrane domain CLM98_20400 IPR017871 ABC transporter, conserved site CLM98_20400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20400 IPR036640 CLM98_20400 CLM98_20405 IPR022037 Protein of unknown function DUF3606 CLM98_20410 IPR025419 Domain of unknown function DUF4142 CLM98_20415 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLM98_20415 IPR011032 GroES (chaperonin 10)-like CLM98_20415 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_20415 IPR013154 Alcohol dehydrogenase GroES-like CLM98_20415 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain CLM98_20415 IPR036291 CLM98_20415 CLM98_20425 IPR005358 Putative zinc- or iron-chelating domain containing protein CLM98_20440 IPR021783 Protein of unknown function DUF3348 CLM98_20455 IPR021549 Protein of unknown function DUF2894 CLM98_20460 IPR000531 TonB-dependent receptor, beta-barrel CLM98_20460 IPR010105 TonB-dependent siderophore receptor CLM98_20460 IPR012910 TonB-dependent receptor, plug CLM98_20460 IPR036942 CLM98_20460 CLM98_20460 IPR037066 CLM98_20460 CLM98_20465 IPR021913 Protein of unknown function DUF3526 CLM98_20470 IPR021913 Protein of unknown function DUF3526 CLM98_20470 IPR032688 CLM98_20470 CLM98_20475 IPR003439 ABC transporter-like CLM98_20475 IPR003593 AAA+ ATPase domain CLM98_20475 IPR017871 ABC transporter, conserved site CLM98_20475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20480 IPR000834 Peptidase M14, carboxypeptidase A CLM98_20485 IPR000847 Transcription regulator HTH, LysR CLM98_20485 IPR005119 LysR, substrate-binding CLM98_20485 IPR036388 CLM98_20485 CLM98_20485 IPR036390 CLM98_20485 CLM98_20490 IPR006175 YjgF/Yer057p/UK114 family CLM98_20490 IPR035959 CLM98_20490 CLM98_20510 IPR024370 PBP domain CLM98_20515 IPR003660 HAMP linker domain CLM98_20515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLM98_20515 IPR004090 Chemotaxis methyl-accepting receptor CLM98_20520 IPR001604 DNA/RNA non-specific endonuclease CLM98_20520 IPR020821 Extracellular Endonuclease, subunit A CLM98_20525 IPR000073 Alpha/beta hydrolase fold-1 CLM98_20525 IPR029058 Alpha/Beta hydrolase fold CLM98_20535 IPR003680 Flavodoxin-like fold CLM98_20535 IPR023048 NADH-azoreductase, FMN-dependent CLM98_20535 IPR029039 Flavoprotein-like CLM98_20540 IPR005545 YCII-related CLM98_20540 IPR011008 Dimeric alpha-beta barrel CLM98_20550 IPR023387 DUF1653-like domain CLM98_20550 IPR037135 CLM98_20550 CLM98_20565 IPR036513 CLM98_20565 CLM98_20580 IPR000994 Peptidase M24, structural domain CLM98_20580 IPR001714 Peptidase M24, methionine aminopeptidase CLM98_20580 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLM98_20580 IPR036005 CLM98_20580 CLM98_20585 IPR021831 Protein of unknown function DUF3423 CLM98_20595 IPR038488 CLM98_20595 CLM98_20610 IPR000943 RNA polymerase sigma-70 CLM98_20610 IPR007127 RNA polymerase sigma factor 70, region 1.1 CLM98_20610 IPR007624 RNA polymerase sigma-70 region 3 CLM98_20610 IPR007627 RNA polymerase sigma-70 region 2 CLM98_20610 IPR007630 RNA polymerase sigma-70 region 4 CLM98_20610 IPR007631 RNA polymerase sigma factor 70, non-essential domain CLM98_20610 IPR009042 RNA polymerase sigma-70 region 1.2 CLM98_20610 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CLM98_20610 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_20610 IPR013325 RNA polymerase sigma factor, region 2 CLM98_20610 IPR014284 RNA polymerase sigma-70 like domain CLM98_20610 IPR028630 RNA polymerase sigma factor RpoD CLM98_20610 IPR036388 CLM98_20610 CLM98_20615 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase CLM98_20615 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLM98_20620 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLM98_20630 IPR016181 Acyl-CoA N-acyltransferase CLM98_20640 IPR000926 GTP cyclohydrolase II, RibA CLM98_20640 IPR032677 CLM98_20640 CLM98_20640 IPR036144 CLM98_20640 CLM98_20645 IPR005182 Domain of unknown function DUF304 CLM98_20650 IPR005182 Domain of unknown function DUF304 CLM98_20650 IPR014529 Uncharacterised conserved protein UCP026631 CLM98_20655 IPR003331 UDP-N-acetylglucosamine 2-epimerase CLM98_20655 IPR016886 Predicted glycerophosphotransferase UCP028458 CLM98_20660 IPR001173 Glycosyltransferase 2-like CLM98_20660 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_20665 IPR007016 O-antigen ligase-related CLM98_20670 IPR038731 CLM98_20670 CLM98_20675 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CLM98_20675 IPR004573 rRNA small subunit methyltransferase B CLM98_20675 IPR006027 NusB/RsmB/TIM44 CLM98_20675 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CLM98_20675 IPR023267 RNA (C5-cytosine) methyltransferase CLM98_20675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_20675 IPR035926 CLM98_20675 CLM98_20680 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLM98_20680 IPR002376 Formyl transferase, N-terminal CLM98_20680 IPR005793 Formyl transferase, C-terminal CLM98_20680 IPR005794 Methionyl-tRNA formyltransferase CLM98_20680 IPR011034 Formyl transferase, C-terminal-like CLM98_20680 IPR036477 CLM98_20680 CLM98_20680 IPR037022 CLM98_20680 CLM98_20685 IPR023635 Peptide deformylase CLM98_20685 IPR036821 CLM98_20685 CLM98_20690 IPR018392 LysM domain CLM98_20690 IPR036779 CLM98_20690 CLM98_20695 IPR003488 DNA recombination-mediator protein A CLM98_20695 IPR036388 CLM98_20695 CLM98_20700 IPR007456 Protein of unknown function DUF494 CLM98_20705 IPR001082 Fimbrial protein pilin CLM98_20705 IPR025640 Domain of unknown function DUF4339 CLM98_20710 IPR010432 RDD CLM98_20710 IPR025640 Domain of unknown function DUF4339 CLM98_20710 IPR035445 CLM98_20710 CLM98_20715 IPR003601 DNA topoisomerase, type IA, domain 2 CLM98_20715 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLM98_20715 IPR005733 DNA topoisomerase I, bacterial-type CLM98_20715 IPR006171 Toprim domain CLM98_20715 IPR013497 DNA topoisomerase, type IA, central CLM98_20715 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLM98_20715 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLM98_20715 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLM98_20715 IPR023405 DNA topoisomerase, type IA, core domain CLM98_20715 IPR023406 DNA topoisomerase, type IA, active site CLM98_20715 IPR025589 Topoisomerase C-terminal repeat CLM98_20715 IPR028612 DNA topoisomerase I, type IA CLM98_20720 IPR006070 YrdC-like domain CLM98_20720 IPR017945 DHBP synthase RibB-like alpha/beta domain CLM98_20720 IPR023535 Threonylcarbamoyl-AMP synthase CLM98_20735 IPR002347 Glucose/ribitol dehydrogenase CLM98_20735 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_20735 IPR036291 CLM98_20735 CLM98_20745 IPR002142 Peptidase S49 CLM98_20745 IPR004634 Peptidase S49, protease IV CLM98_20745 IPR004635 Peptidase S49, SppA CLM98_20745 IPR029045 ClpP/crotonase-like domain CLM98_20750 IPR002528 Multi antimicrobial extrusion protein CLM98_20755 IPR022134 Protein of unknown function DUF3667 CLM98_20760 IPR021455 Protein of unknown function DUF3106 CLM98_20770 IPR001650 Helicase, C-terminal CLM98_20770 IPR005259 Primosomal protein n CLM98_20770 IPR011545 DEAD/DEAH box helicase domain CLM98_20770 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_20770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20775 IPR004045 Glutathione S-transferase, N-terminal CLM98_20775 IPR004046 Glutathione S-transferase, C-terminal CLM98_20775 IPR036249 CLM98_20775 CLM98_20775 IPR036282 CLM98_20775 CLM98_20780 IPR021139 NYN domain, limkain-b1-type CLM98_20780 IPR025605 OST-HTH/LOTUS domain CLM98_20790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLM98_20790 IPR036188 CLM98_20790 CLM98_20795 IPR005115 Uncharacterised domain UPF0126 CLM98_20800 IPR000943 RNA polymerase sigma-70 CLM98_20800 IPR007627 RNA polymerase sigma-70 region 2 CLM98_20800 IPR007630 RNA polymerase sigma-70 region 4 CLM98_20800 IPR009042 RNA polymerase sigma-70 region 1.2 CLM98_20800 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CLM98_20800 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_20800 IPR013325 RNA polymerase sigma factor, region 2 CLM98_20800 IPR014284 RNA polymerase sigma-70 like domain CLM98_20800 IPR036388 CLM98_20800 CLM98_20805 IPR002043 Uracil-DNA glycosylase CLM98_20805 IPR005122 Uracil-DNA glycosylase-like CLM98_20805 IPR018085 Uracil-DNA glycosylase, active site CLM98_20805 IPR036895 CLM98_20805 CLM98_20810 IPR001789 Signal transduction response regulator, receiver domain CLM98_20810 IPR011006 CheY-like superfamily CLM98_20815 IPR004513 ABC transporter, cell division protein FtsX CLM98_20820 IPR003439 ABC transporter-like CLM98_20820 IPR003593 AAA+ ATPase domain CLM98_20820 IPR005286 Cell division protein FtsE, ATP-binding CLM98_20820 IPR017871 ABC transporter, conserved site CLM98_20820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20825 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLM98_20825 IPR001650 Helicase, C-terminal CLM98_20825 IPR011545 DEAD/DEAH box helicase domain CLM98_20825 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_20825 IPR022077 ATP-dependent RNA helicase RhlB CLM98_20825 IPR023554 RNA helicase, ATP-dependent, RhlB-type CLM98_20825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20830 IPR005746 Thioredoxin CLM98_20830 IPR013766 Thioredoxin domain CLM98_20830 IPR017937 Thioredoxin, conserved site CLM98_20830 IPR036249 CLM98_20830 CLM98_20835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLM98_20835 IPR003593 AAA+ ATPase domain CLM98_20835 IPR004665 Transcription termination factor Rho CLM98_20835 IPR011112 Rho termination factor, N-terminal CLM98_20835 IPR011113 Rho termination factor, RNA-binding CLM98_20835 IPR011129 Cold shock protein CLM98_20835 IPR012340 Nucleic acid-binding, OB-fold CLM98_20835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20835 IPR036269 CLM98_20835 CLM98_20850 IPR010452 Isocitrate dehydrogenase kinasephosphatase CLM98_20855 IPR000847 Transcription regulator HTH, LysR CLM98_20855 IPR005119 LysR, substrate-binding CLM98_20855 IPR036388 CLM98_20855 CLM98_20855 IPR036390 CLM98_20855 CLM98_20865 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CLM98_20870 IPR011990 Tetratricopeptide-like helical domain CLM98_20875 IPR006483 CRISPR-associated Cas3-HD domain CLM98_20875 IPR011545 DEAD/DEAH box helicase domain CLM98_20875 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_20875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_20875 IPR038257 CLM98_20875 CLM98_20880 IPR010155 CRISPR-associated protein, Cas5d-type CLM98_20880 IPR013422 CRISPR-associated protein Cas5, N-terminal CLM98_20880 IPR021124 CRISPR-associated protein, Cas5 CLM98_20890 IPR006482 CRISPR-associated protein TM1801 CLM98_20890 IPR013418 CRISPR-associated protein Csd2 CLM98_20895 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLM98_20895 IPR013343 CRISPR-associated protein Cas4 CLM98_20895 IPR022765 Dna2/Cas4, domain of unknown function DUF83 CLM98_20900 IPR002729 CRISPR-associated protein Cas1 CLM98_20900 IPR019856 CRISPR-associated protein Cas1, DVULG subtype CLM98_20905 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CLM98_20905 IPR021127 CRISPR associated protein Cas2 CLM98_20915 IPR018392 LysM domain CLM98_20915 IPR036779 CLM98_20915 CLM98_20920 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CLM98_20920 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CLM98_20920 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CLM98_20925 IPR002933 Peptidase M20 CLM98_20925 IPR011650 Peptidase M20, dimerisation domain CLM98_20925 IPR017439 Amidohydrolase CLM98_20925 IPR036264 CLM98_20925 CLM98_20930 IPR006143 RND efflux pump, membrane fusion protein CLM98_20930 IPR032317 CLM98_20930 CLM98_20935 IPR001036 Acriflavin resistance protein CLM98_20935 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_20940 IPR001036 Acriflavin resistance protein CLM98_20940 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_20945 IPR009770 Domain of unknown function DUF1338 CLM98_20965 IPR023198 Phosphoglycolate phosphatase, domain 2 CLM98_20965 IPR023214 HAD-like domain CLM98_20965 IPR036412 CLM98_20965 CLM98_20970 IPR002048 EF-hand domain CLM98_20970 IPR011992 EF-hand domain pair CLM98_20970 IPR018247 EF-Hand 1, calcium-binding site CLM98_20980 IPR002048 EF-hand domain CLM98_20980 IPR011992 EF-hand domain pair CLM98_20980 IPR018247 EF-Hand 1, calcium-binding site CLM98_20990 IPR017143 Uncharacterised conserved protein UCP037225 CLM98_20990 IPR025990 Cysteine-rich CPXCG protein CLM98_20995 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase CLM98_20995 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLM98_21000 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLM98_21000 IPR036505 CLM98_21000 CLM98_21005 IPR000064 Endopeptidase, NLPC/P60 domain CLM98_21005 IPR026864 SH3b2-type SH3 domain CLM98_21005 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type CLM98_21005 IPR038765 CLM98_21005 CLM98_21005 IPR039439 CLM98_21005 CLM98_21010 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_21010 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_21010 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_21010 IPR029017 Enolase N-terminal domain-like CLM98_21010 IPR029065 Enolase C-terminal domain-like CLM98_21010 IPR036849 CLM98_21010 CLM98_21020 IPR002293 Amino acid/polyamine transporter I CLM98_21035 IPR008024 YiaAB two helix CLM98_21040 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLM98_21040 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_21040 IPR012938 Glucose/Sorbosone dehydrogenase CLM98_21045 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_21045 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_21045 IPR013783 Immunoglobulin-like fold CLM98_21045 IPR017853 Glycoside hydrolase, superfamily CLM98_21045 IPR019800 Glycoside hydrolase, family 3, active site CLM98_21045 IPR026891 Fibronectin type III-like domain CLM98_21045 IPR036881 CLM98_21045 CLM98_21045 IPR036962 CLM98_21045 CLM98_21050 IPR006156 Dihydroneopterin aldolase CLM98_21050 IPR006157 Dihydroneopterin aldolase/epimerase domain CLM98_21055 IPR000905 Gcp-like domain CLM98_21055 IPR017860 Peptidase M22, conserved site CLM98_21055 IPR017861 Kae1/YgjD family CLM98_21055 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CLM98_21060 IPR001911 Ribosomal protein S21 CLM98_21060 IPR018278 Ribosomal protein S21, conserved site CLM98_21060 IPR038380 CLM98_21060 CLM98_21065 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related CLM98_21065 IPR019004 Uncharacterised domain YOR215C, mitochondrial CLM98_21065 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLM98_21075 IPR017039 Virulence factor BrkB CLM98_21080 IPR002694 Zinc finger, CHC2-type CLM98_21080 IPR006171 Toprim domain CLM98_21080 IPR006295 DNA primase, DnaG CLM98_21080 IPR013173 DNA primase DnaG, DnaB-binding domain CLM98_21080 IPR013264 DNA primase, catalytic core, N-terminal CLM98_21080 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLM98_21080 IPR019475 DNA primase, DnaB-helicase binding domain CLM98_21080 IPR030846 CLM98_21080 CLM98_21080 IPR036977 CLM98_21080 CLM98_21080 IPR037068 CLM98_21080 CLM98_21085 IPR016833 Putative sodium bile acid cotransporter CLM98_21085 IPR038770 CLM98_21085 CLM98_21090 IPR036249 CLM98_21090 CLM98_21095 IPR000537 UbiA prenyltransferase family CLM98_21095 IPR006369 Protohaem IX farnesyltransferase CLM98_21095 IPR030470 CLM98_21095 CLM98_21100 IPR003780 COX15/CtaA family CLM98_21105 IPR036249 CLM98_21105 CLM98_21110 IPR002994 Surfeit locus 1/Shy1 CLM98_21115 IPR021313 Protein of unknown function DUF2909 CLM98_21120 IPR000298 Cytochrome c oxidase subunit III domain CLM98_21120 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CLM98_21120 IPR035973 CLM98_21120 CLM98_21125 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 CLM98_21125 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain CLM98_21135 IPR000883 Cytochrome c oxidase subunit I CLM98_21135 IPR014241 Cytochrome c oxidase, subunit I bacterial type CLM98_21135 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLM98_21135 IPR036927 CLM98_21135 CLM98_21140 IPR001505 Copper centre Cu(A) CLM98_21140 IPR002429 Cytochrome c oxidase subunit II C-terminal CLM98_21140 IPR008972 Cupredoxin CLM98_21140 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CLM98_21140 IPR014222 Cytochrome c oxidase, subunit II CLM98_21140 IPR036257 CLM98_21140 CLM98_21145 IPR019253 Protein of unknown function DUF2244, transmembrane CLM98_21150 IPR002872 Proline dehydrogenase domain CLM98_21150 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CLM98_21150 IPR015590 Aldehyde dehydrogenase domain CLM98_21150 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_21150 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_21150 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_21150 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_21150 IPR024082 Proline dehydrogenase PutA, domain II CLM98_21150 IPR024089 Proline dehydrogenase PutA, domain I/II CLM98_21150 IPR025703 Bifunctional protein PutA CLM98_21150 IPR029041 FAD-linked oxidoreductase-like CLM98_21185 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_21185 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLM98_21185 IPR002307 Tyrosine-tRNA ligase CLM98_21185 IPR002942 RNA-binding S4 domain CLM98_21185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21185 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CLM98_21185 IPR036986 CLM98_21185 CLM98_21190 IPR007340 Opacity-associated protein A CLM98_21190 IPR011055 Duplicated hybrid motif CLM98_21190 IPR016047 Peptidase M23 CLM98_21195 IPR005338 Anhydro-N-acetylmuramic acid kinase CLM98_21205 IPR011701 Major facilitator superfamily CLM98_21205 IPR036259 CLM98_21205 CLM98_21210 IPR004808 AP endonuclease 1 CLM98_21210 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_21210 IPR020847 AP endonuclease 1, binding site CLM98_21210 IPR036691 CLM98_21210 CLM98_21215 IPR000836 Phosphoribosyltransferase domain CLM98_21215 IPR004467 Orotate phosphoribosyl transferase domain CLM98_21215 IPR023031 Orotate phosphoribosyltransferase CLM98_21215 IPR029057 Phosphoribosyltransferase-like CLM98_21225 IPR025669 AAA domain CLM98_21225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21230 IPR003115 ParB/Sulfiredoxin CLM98_21230 IPR004437 ParB/RepB/Spo0J partition protein family CLM98_21230 IPR036086 CLM98_21230 CLM98_21235 IPR021725 Pathogenicity locus CLM98_21245 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_21245 IPR036291 CLM98_21245 CLM98_21250 IPR001173 Glycosyltransferase 2-like CLM98_21250 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_21255 IPR011499 Lipid A biosynthesis CLM98_21255 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis CLM98_21265 IPR005841 Alpha-D-phosphohexomutase superfamily CLM98_21265 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLM98_21265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLM98_21265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLM98_21265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLM98_21265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLM98_21265 IPR036900 CLM98_21265 CLM98_21270 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CLM98_21270 IPR029054 dUTPase-like CLM98_21270 IPR036157 CLM98_21270 CLM98_21275 IPR003382 Flavoprotein CLM98_21275 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CLM98_21275 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CLM98_21275 IPR035929 CLM98_21275 CLM98_21275 IPR036551 CLM98_21275 CLM98_21280 IPR001405 RadC protein CLM98_21280 IPR010994 RuvA domain 2-like CLM98_21280 IPR020891 Uncharacterised protein family UPF0758, conserved site CLM98_21280 IPR025657 RadC-like JAB domain CLM98_21285 IPR001278 Arginine-tRNA ligase CLM98_21285 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLM98_21285 IPR005148 Arginyl tRNA synthetase N-terminal domain CLM98_21285 IPR008909 DALR anticodon binding CLM98_21285 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLM98_21285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21285 IPR035684 CLM98_21285 CLM98_21285 IPR036695 CLM98_21285 CLM98_21290 IPR007730 Sporulation-related domain CLM98_21290 IPR036680 CLM98_21290 CLM98_21300 IPR002347 Glucose/ribitol dehydrogenase CLM98_21300 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_21300 IPR036291 CLM98_21300 CLM98_21305 IPR002656 Acyltransferase 3 CLM98_21310 IPR004276 Glycosyl transferase, family 28 CLM98_21315 IPR000873 AMP-dependent synthetase/ligase CLM98_21315 IPR001031 Thioesterase CLM98_21315 IPR001242 Condensation domain CLM98_21315 IPR006162 Phosphopantetheine attachment site CLM98_21315 IPR009081 Acyl carrier protein-like CLM98_21315 IPR010071 Amino acid adenylation domain CLM98_21315 IPR020802 Polyketide synthase, thioesterase domain CLM98_21315 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLM98_21315 IPR020845 AMP-binding, conserved site CLM98_21315 IPR023213 Chloramphenicol acetyltransferase-like domain CLM98_21315 IPR025110 AMP-binding enzyme C-terminal domain CLM98_21315 IPR029058 Alpha/Beta hydrolase fold CLM98_21315 IPR036736 CLM98_21315 CLM98_21320 IPR000183 Ornithine/DAP/Arg decarboxylase CLM98_21320 IPR002985 Arginine decarboxylase CLM98_21320 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLM98_21320 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLM98_21320 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CLM98_21320 IPR029066 PLP-binding barrel CLM98_21325 IPR001045 Spermidine/spermine synthases family CLM98_21325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_21325 IPR030373 CLM98_21325 CLM98_21325 IPR035246 CLM98_21325 CLM98_21325 IPR037163 CLM98_21325 CLM98_21330 IPR018649 Domain of unknown function DUF2078 CLM98_21330 IPR039519 CLM98_21330 CLM98_21335 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CLM98_21340 IPR002575 Aminoglycoside phosphotransferase CLM98_21340 IPR011009 Protein kinase-like domain CLM98_21345 IPR011496 Beta-N-acetylglucosaminidase CLM98_21345 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal CLM98_21345 IPR017853 Glycoside hydrolase, superfamily CLM98_21345 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CLM98_21355 IPR002187 Nitrogen regulatory protein PII CLM98_21355 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLM98_21355 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLM98_21355 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLM98_21355 IPR017918 Nitrogen regulatory protein PII, conserved site CLM98_21360 IPR007475 Membrane fusogenic activity CLM98_21365 IPR000523 Magnesium chelatase, ChlI subunit CLM98_21365 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase CLM98_21365 IPR003593 AAA+ ATPase domain CLM98_21365 IPR004482 Mg chelatase-related protein CLM98_21365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLM98_21365 IPR020568 Ribosomal protein S5 domain 2-type fold CLM98_21365 IPR025158 Mg chelatase-related protein, C-terminal domain CLM98_21365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21370 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CLM98_21370 IPR002446 Lipocalin, bacterial CLM98_21370 IPR012674 Calycin CLM98_21370 IPR022271 Lipocalin, ApoD type CLM98_21370 IPR022272 Lipocalin family conserved site CLM98_21380 IPR001633 EAL domain CLM98_21380 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CLM98_21380 IPR035919 CLM98_21380 CLM98_21385 IPR005804 Fatty acid desaturase, type 1 CLM98_21390 IPR001041 2Fe-2S ferredoxin-type domain CLM98_21390 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21390 IPR001834 NADH:cytochrome b5 reductase (CBR) CLM98_21390 IPR008333 Oxidoreductase, FAD-binding domain CLM98_21390 IPR012675 Beta-grasp domain CLM98_21390 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21390 IPR036010 CLM98_21390 CLM98_21390 IPR039261 CLM98_21390 CLM98_21395 IPR001647 DNA-binding HTH domain, TetR-type CLM98_21395 IPR009057 Homeodomain-like CLM98_21415 IPR001107 Band 7 protein CLM98_21415 IPR001972 Stomatin family CLM98_21415 IPR036013 CLM98_21415 CLM98_21420 IPR001233 tRNA-splicing ligase, RtcB CLM98_21420 IPR036025 CLM98_21420 CLM98_21430 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_21430 IPR002471 Peptidase S9, serine active site CLM98_21430 IPR029058 Alpha/Beta hydrolase fold CLM98_21435 IPR021519 Protein of unknown function DUF3182 CLM98_21450 IPR025419 Domain of unknown function DUF4142 CLM98_21455 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_21455 IPR010099 Sugar nucleotide epimerase YfcH,-like putative CLM98_21455 IPR013549 Domain of unknown function DUF1731 CLM98_21455 IPR036291 CLM98_21455 CLM98_21460 IPR001789 Signal transduction response regulator, receiver domain CLM98_21460 IPR001867 Signal transduction response regulator, C-terminal CLM98_21460 IPR011006 CheY-like superfamily CLM98_21460 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_21460 IPR036388 CLM98_21460 CLM98_21465 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_21465 IPR003660 HAMP linker domain CLM98_21465 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_21465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_21465 IPR036097 CLM98_21465 CLM98_21465 IPR036890 CLM98_21465 CLM98_21480 IPR021747 Protein of unknown function DUF3313 CLM98_21495 IPR001478 PDZ domain CLM98_21495 IPR001940 Peptidase S1C CLM98_21495 IPR009003 Trypsin-like cysteine/serine peptidase domain CLM98_21495 IPR011782 Peptidase S1C, Do CLM98_21495 IPR036034 CLM98_21495 CLM98_21515 IPR002549 Uncharacterised protein family UPF0118 CLM98_21520 IPR006439 HAD hydrolase, subfamily IA CLM98_21520 IPR023214 HAD-like domain CLM98_21520 IPR036412 CLM98_21520 CLM98_21525 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CLM98_21525 IPR011356 Leucine aminopeptidase/peptidase B CLM98_21535 IPR000792 Transcription regulator LuxR, C-terminal CLM98_21535 IPR007627 RNA polymerase sigma-70 region 2 CLM98_21535 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_21535 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_21535 IPR013325 RNA polymerase sigma factor, region 2 CLM98_21535 IPR014284 RNA polymerase sigma-70 like domain CLM98_21535 IPR036388 CLM98_21535 CLM98_21540 IPR011614 Catalase core domain CLM98_21540 IPR020835 Catalase-like domain CLM98_21540 IPR024168 Catalase, SrpA-type, predicted CLM98_21545 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLM98_21545 IPR016174 Di-haem cytochrome, transmembrane CLM98_21550 IPR029010 ThuA-like domain CLM98_21550 IPR029062 Class I glutamine amidotransferase-like CLM98_21555 IPR000792 Transcription regulator LuxR, C-terminal CLM98_21555 IPR001789 Signal transduction response regulator, receiver domain CLM98_21555 IPR011006 CheY-like superfamily CLM98_21555 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_21560 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLM98_21560 IPR036890 CLM98_21560 CLM98_21565 IPR006143 RND efflux pump, membrane fusion protein CLM98_21565 IPR032317 CLM98_21565 CLM98_21570 IPR003439 ABC transporter-like CLM98_21570 IPR003593 AAA+ ATPase domain CLM98_21570 IPR017871 ABC transporter, conserved site CLM98_21570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21575 IPR003838 Permease FtsX-like CLM98_21575 IPR025857 MacB-like periplasmic core domain CLM98_21580 IPR003838 Permease FtsX-like CLM98_21580 IPR025857 MacB-like periplasmic core domain CLM98_21585 IPR000073 Alpha/beta hydrolase fold-1 CLM98_21585 IPR029058 Alpha/Beta hydrolase fold CLM98_21595 IPR000620 Drug/metabolite transporter CLM98_21610 IPR003137 Protease-associated domain, PA CLM98_21610 IPR007484 Peptidase M28 CLM98_21615 IPR001279 Beta-lactamase-like CLM98_21615 IPR036866 CLM98_21615 CLM98_21620 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLM98_21620 IPR002306 Tryptophan-tRNA ligase CLM98_21620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_21620 IPR024109 Tryptophan-tRNA ligase, bacterial-type CLM98_21620 IPR036913 CLM98_21620 CLM98_21625 IPR008462 CsbD-like CLM98_21625 IPR026042 Stress response protein YjbJ CLM98_21625 IPR036629 CLM98_21625 CLM98_21630 IPR012556 Entericidin EcnAB CLM98_21635 IPR012556 Entericidin EcnAB CLM98_21640 IPR006035 Ureohydrolase CLM98_21640 IPR014033 Arginase CLM98_21640 IPR020855 Ureohydrolase, manganese-binding site CLM98_21640 IPR023696 Ureohydrolase domain CLM98_21645 IPR004942 Dynein light chain-related CLM98_21660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21670 IPR018094 Thymidylate kinase CLM98_21670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21670 IPR039430 CLM98_21670 CLM98_21680 IPR007730 Sporulation-related domain CLM98_21680 IPR036680 CLM98_21680 CLM98_21685 IPR004619 Type III pantothenate kinase CLM98_21690 IPR003142 Biotin protein ligase, C-terminal CLM98_21690 IPR004143 Biotin/lipoate A/B protein ligase CLM98_21690 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CLM98_21690 IPR008988 Transcriptional repressor, C-terminal CLM98_21690 IPR013196 Helix-turn-helix, type 11 CLM98_21690 IPR030855 CLM98_21690 CLM98_21690 IPR036388 CLM98_21690 CLM98_21690 IPR036390 CLM98_21690 CLM98_21705 IPR010384 MtfA family CLM98_21705 IPR024079 Metallopeptidase, catalytic domain CLM98_21710 IPR010869 Protein of unknown function DUF1501 CLM98_21715 IPR014917 Protein of unknown function DUF1800 CLM98_21720 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_21720 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_21720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_21720 IPR036097 CLM98_21720 CLM98_21720 IPR036890 CLM98_21720 CLM98_21725 IPR001789 Signal transduction response regulator, receiver domain CLM98_21725 IPR001867 Signal transduction response regulator, C-terminal CLM98_21725 IPR011006 CheY-like superfamily CLM98_21725 IPR036388 CLM98_21725 CLM98_21735 IPR001269 tRNA-dihydrouridine synthase CLM98_21735 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN CLM98_21735 IPR013785 Aldolase-type TIM barrel CLM98_21735 IPR018517 tRNA-dihydrouridine synthase, conserved site CLM98_21750 IPR002110 Ankyrin repeat CLM98_21750 IPR020683 Ankyrin repeat-containing domain CLM98_21750 IPR036770 CLM98_21750 CLM98_21765 IPR006555 ATP-dependent helicase, C-terminal CLM98_21765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21765 IPR039000 CLM98_21765 CLM98_21780 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLM98_21780 IPR011342 Shikimate dehydrogenase CLM98_21780 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CLM98_21780 IPR022893 Shikimate, quinate/shikimate dehydrogenase CLM98_21780 IPR036291 CLM98_21780 CLM98_21785 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_21785 IPR011659 WD40-like Beta Propeller CLM98_21790 IPR001094 Flavodoxin CLM98_21790 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21790 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLM98_21790 IPR005625 PepSY-associated TM helix CLM98_21790 IPR008254 Flavodoxin/nitric oxide synthase CLM98_21790 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21790 IPR029039 Flavoprotein-like CLM98_21790 IPR039261 CLM98_21790 CLM98_21795 IPR001604 DNA/RNA non-specific endonuclease CLM98_21795 IPR018524 DNA/RNA non-specific endonuclease, active site CLM98_21795 IPR020821 Extracellular Endonuclease, subunit A CLM98_21800 IPR000847 Transcription regulator HTH, LysR CLM98_21800 IPR005119 LysR, substrate-binding CLM98_21800 IPR036388 CLM98_21800 CLM98_21800 IPR036390 CLM98_21800 CLM98_21805 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLM98_21805 IPR036291 CLM98_21805 CLM98_21815 IPR001731 Porphobilinogen synthase CLM98_21815 IPR013785 Aldolase-type TIM barrel CLM98_21815 IPR030656 CLM98_21815 CLM98_21830 IPR010281 Protein of unknown function DUF885 CLM98_21840 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_21840 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal CLM98_21840 IPR029058 Alpha/Beta hydrolase fold CLM98_21840 IPR038554 CLM98_21840 CLM98_21845 IPR004045 Glutathione S-transferase, N-terminal CLM98_21845 IPR004046 Glutathione S-transferase, C-terminal CLM98_21845 IPR036249 CLM98_21845 CLM98_21845 IPR036282 CLM98_21845 CLM98_21855 IPR000531 TonB-dependent receptor, beta-barrel CLM98_21855 IPR010104 Bacterial TonB-dependent receptor CLM98_21855 IPR012910 TonB-dependent receptor, plug CLM98_21855 IPR037066 CLM98_21855 CLM98_21860 IPR010836 SapC CLM98_21865 IPR003347 JmjC domain CLM98_21870 IPR006905 Tryptophan halogenase CLM98_21870 IPR033856 CLM98_21870 CLM98_21870 IPR036188 CLM98_21870 CLM98_21875 IPR003538 Gram-negative bacterial TonB protein CLM98_21875 IPR006260 TonB, C-terminal CLM98_21875 IPR037682 CLM98_21875 CLM98_21880 IPR032688 CLM98_21880 CLM98_21885 IPR003439 ABC transporter-like CLM98_21885 IPR003593 AAA+ ATPase domain CLM98_21885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21890 IPR000073 Alpha/beta hydrolase fold-1 CLM98_21890 IPR002410 Peptidase S33 CLM98_21890 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal CLM98_21890 IPR029058 Alpha/Beta hydrolase fold CLM98_21895 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_21895 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_21905 IPR000514 Glycoside hydrolase, family 39 CLM98_21905 IPR017853 Glycoside hydrolase, superfamily CLM98_21910 IPR003735 Metal-sensitive transcriptional repressor CLM98_21910 IPR038390 CLM98_21910 CLM98_21915 IPR002524 Cation efflux protein CLM98_21915 IPR027469 Cation efflux protein transmembrane domain CLM98_21920 IPR005625 PepSY-associated TM helix CLM98_21925 IPR000531 TonB-dependent receptor, beta-barrel CLM98_21925 IPR010105 TonB-dependent siderophore receptor CLM98_21925 IPR010917 TonB-dependent receptor, conserved site CLM98_21925 IPR012910 TonB-dependent receptor, plug CLM98_21925 IPR036942 CLM98_21925 CLM98_21925 IPR037066 CLM98_21925 CLM98_21930 IPR021439 Protein of unknown function DUF3088 CLM98_21935 IPR002818 ThiJ/PfpI CLM98_21935 IPR009057 Homeodomain-like CLM98_21935 IPR018060 DNA binding HTH domain, AraC-type CLM98_21935 IPR018062 HTH domain AraC-type, conserved site CLM98_21935 IPR029062 Class I glutamine amidotransferase-like CLM98_21940 IPR001221 Phenol hydroxylase reductase CLM98_21940 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLM98_21940 IPR008333 Oxidoreductase, FAD-binding domain CLM98_21940 IPR017938 Riboflavin synthase-like beta-barrel CLM98_21940 IPR039261 CLM98_21940 CLM98_21945 IPR003439 ABC transporter-like CLM98_21945 IPR003593 AAA+ ATPase domain CLM98_21945 IPR017871 ABC transporter, conserved site CLM98_21945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_21950 IPR000412 ABC-2 transporter CLM98_21950 IPR013525 ABC-2 type transporter CLM98_21960 IPR003710 Ketopantoate reductase ApbA/PanE CLM98_21960 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_21960 IPR013328 Dehydrogenase, multihelical CLM98_21960 IPR013332 Ketopantoate reductase, N-terminal domain CLM98_21960 IPR013752 Ketopantoate reductase, C-terminal domain CLM98_21960 IPR036291 CLM98_21960 CLM98_21975 IPR006683 Thioesterase superfamily CLM98_21975 IPR029069 HotDog domain CLM98_21985 IPR013766 Thioredoxin domain CLM98_21985 IPR036249 CLM98_21985 CLM98_21990 IPR008254 Flavodoxin/nitric oxide synthase CLM98_21990 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative CLM98_21990 IPR029039 Flavoprotein-like CLM98_21995 IPR000358 Ribonucleotide reductase small subunit CLM98_21995 IPR009078 Ferritin-like superfamily CLM98_21995 IPR012348 Ribonucleotide reductase-related CLM98_22005 IPR000788 Ribonucleotide reductase large subunit, C-terminal CLM98_22005 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CLM98_22005 IPR013346 Ribonucleotide reductase, class I , alpha subunit CLM98_22005 IPR013509 Ribonucleotide reductase large subunit, N-terminal CLM98_22020 IPR007427 Protein of unknown function DUF475 CLM98_22025 IPR000182 GNAT domain CLM98_22025 IPR003781 CoA-binding CLM98_22025 IPR013815 ATP-grasp fold, subdomain 1 CLM98_22025 IPR016102 Succinyl-CoA synthetase-like CLM98_22025 IPR016181 Acyl-CoA N-acyltransferase CLM98_22025 IPR032875 CLM98_22025 CLM98_22025 IPR036291 CLM98_22025 CLM98_22030 IPR000644 CBS domain CLM98_22030 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLM98_22030 IPR006668 Magnesium transporter, MgtE intracellular domain CLM98_22030 IPR006669 Magnesium transporter MgtE CLM98_22030 IPR036739 CLM98_22030 CLM98_22030 IPR038048 CLM98_22030 CLM98_22030 IPR038076 CLM98_22030 CLM98_22045 IPR003148 Regulator of K+ conductance, N-terminal CLM98_22045 IPR004771 K+/H+ exchanger CLM98_22045 IPR006153 Cation/H+ exchanger CLM98_22045 IPR036291 CLM98_22045 CLM98_22045 IPR038770 CLM98_22045 CLM98_22050 IPR001282 Glucose-6-phosphate dehydrogenase CLM98_22050 IPR019796 Glucose-6-phosphate dehydrogenase, active site CLM98_22050 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CLM98_22050 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CLM98_22050 IPR036291 CLM98_22050 CLM98_22055 IPR008928 Six-hairpin glycosidase-like CLM98_22055 IPR011613 Glycoside hydrolase family 15 CLM98_22055 IPR012341 Six-hairpin glycosidase CLM98_22060 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 CLM98_22060 IPR036196 CLM98_22060 CLM98_22065 IPR002110 Ankyrin repeat CLM98_22065 IPR020683 Ankyrin repeat-containing domain CLM98_22065 IPR036770 CLM98_22065 CLM98_22070 IPR027354 YcgL domain CLM98_22070 IPR038068 CLM98_22070 CLM98_22075 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_22075 IPR014031 Beta-ketoacyl synthase, C-terminal CLM98_22075 IPR016039 Thiolase-like CLM98_22075 IPR018201 Beta-ketoacyl synthase, active site CLM98_22075 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLM98_22080 IPR014030 Beta-ketoacyl synthase, N-terminal CLM98_22080 IPR016039 Thiolase-like CLM98_22085 IPR001173 Glycosyltransferase 2-like CLM98_22085 IPR029044 Nucleotide-diphospho-sugar transferases CLM98_22090 IPR006905 Tryptophan halogenase CLM98_22090 IPR036188 CLM98_22090 CLM98_22105 IPR002347 Glucose/ribitol dehydrogenase CLM98_22105 IPR036291 CLM98_22105 CLM98_22115 IPR029069 HotDog domain CLM98_22120 IPR004869 Membrane transport protein, MMPL domain CLM98_22135 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLM98_22135 IPR014548 Predicted acyltransferase CLM98_22140 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLM98_22140 IPR016962 Dehydrase, ECs4332, predicted CLM98_22140 IPR029069 HotDog domain CLM98_22145 IPR002123 Phospholipid/glycerol acyltransferase CLM98_22145 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CLM98_22155 IPR009081 Acyl carrier protein-like CLM98_22155 IPR036736 CLM98_22155 CLM98_22160 IPR006905 Tryptophan halogenase CLM98_22160 IPR036188 CLM98_22160 CLM98_22165 IPR035959 CLM98_22165 CLM98_22175 IPR000873 AMP-dependent synthetase/ligase CLM98_22185 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLM98_22185 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal CLM98_22185 IPR029058 Alpha/Beta hydrolase fold CLM98_22185 IPR038554 CLM98_22185 CLM98_22205 IPR001260 Coproporphyrinogen III oxidase, aerobic CLM98_22205 IPR018375 Coproporphyrinogen III oxidase, conserved site CLM98_22205 IPR036406 CLM98_22205 CLM98_22215 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLM98_22215 IPR002298 DNA polymerase A CLM98_22215 IPR002421 5'-3' exonuclease, N-terminal CLM98_22215 IPR002562 3'-5' exonuclease domain CLM98_22215 IPR008918 Helix-hairpin-helix motif, class 2 CLM98_22215 IPR012337 Ribonuclease H-like domain CLM98_22215 IPR018320 DNA polymerase 1 CLM98_22215 IPR019760 DNA-directed DNA polymerase, family A, conserved site CLM98_22215 IPR020045 5'-3' exonuclease, C-terminal domain CLM98_22215 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLM98_22215 IPR029060 PIN domain-like CLM98_22215 IPR036279 CLM98_22215 CLM98_22215 IPR036397 CLM98_22215 CLM98_22225 IPR010657 ImpA, N-terminal CLM98_22225 IPR017740 Type VI secretion system-associated, ImpA CLM98_22230 IPR008638 Filamentous haemagglutinin, N-terminal CLM98_22230 IPR012334 Pectin lyase fold CLM98_22235 IPR005565 Haemolysin activator HlyB CLM98_22235 IPR013686 Polypeptide-transport-associated, ShlB-type CLM98_22245 IPR000719 Protein kinase domain CLM98_22245 IPR005532 Formylglycine-generating sulphatase enzyme domain CLM98_22245 IPR008271 Serine/threonine-protein kinase, active site CLM98_22245 IPR011009 Protein kinase-like domain CLM98_22245 IPR016187 C-type lectin fold CLM98_22245 IPR017441 Protein kinase, ATP binding site CLM98_22250 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLM98_22250 IPR036457 CLM98_22250 CLM98_22255 IPR017748 Type VI secretion system-associated, BMAA0400 CLM98_22255 IPR038225 CLM98_22255 CLM98_22260 IPR009612 ImcF-related CLM98_22260 IPR010623 Domain of unknown function DUF1215 CLM98_22260 IPR017731 Type VI secretion system, IcmF CLM98_22260 IPR025743 ImcF-related, N-terminal domain CLM98_22260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22265 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLM98_22265 IPR017732 Type IV / VI secretion system, DotU CLM98_22265 IPR036737 CLM98_22265 CLM98_22265 IPR038522 CLM98_22265 CLM98_22270 IPR010263 Protein of unknown function DUF876 CLM98_22275 IPR000253 Forkhead-associated (FHA) domain CLM98_22275 IPR008984 SMAD/FHA domain CLM98_22275 IPR017735 Type VI secretion system, FHA domain-containing protein CLM98_22285 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CLM98_22285 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CLM98_22285 IPR037026 CLM98_22285 CLM98_22290 IPR001440 Tetratricopeptide TPR1 CLM98_22290 IPR011990 Tetratricopeptide-like helical domain CLM98_22290 IPR019734 Tetratricopeptide repeat CLM98_22290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_22295 IPR008727 PAAR motif CLM98_22300 IPR000719 Protein kinase domain CLM98_22300 IPR008271 Serine/threonine-protein kinase, active site CLM98_22300 IPR011009 Protein kinase-like domain CLM98_22300 IPR011990 Tetratricopeptide-like helical domain CLM98_22300 IPR017441 Protein kinase, ATP binding site CLM98_22305 IPR011517 RNA polymerase sigma-70 ECF-like CLM98_22305 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_22305 IPR013325 RNA polymerase sigma factor, region 2 CLM98_22305 IPR014284 RNA polymerase sigma-70 like domain CLM98_22305 IPR036388 CLM98_22305 CLM98_22310 IPR007627 RNA polymerase sigma-70 region 2 CLM98_22310 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLM98_22310 IPR013324 RNA polymerase sigma factor, region 3/4 CLM98_22310 IPR013325 RNA polymerase sigma factor, region 2 CLM98_22310 IPR014284 RNA polymerase sigma-70 like domain CLM98_22310 IPR036388 CLM98_22310 CLM98_22315 IPR006860 FecR protein CLM98_22315 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CLM98_22315 IPR032508 CLM98_22315 CLM98_22315 IPR032623 CLM98_22315 CLM98_22325 IPR000531 TonB-dependent receptor, beta-barrel CLM98_22325 IPR010104 Bacterial TonB-dependent receptor CLM98_22325 IPR011662 Secretin/TonB, short N-terminal CLM98_22325 IPR012910 TonB-dependent receptor, plug CLM98_22325 IPR036942 CLM98_22325 CLM98_22325 IPR037066 CLM98_22325 CLM98_22330 IPR000560 Histidine phosphatase superfamily, clade-2 CLM98_22330 IPR029033 Histidine phosphatase superfamily CLM98_22335 IPR001229 Mannose-binding lectin CLM98_22335 IPR036404 CLM98_22335 CLM98_22335 IPR036691 CLM98_22335 CLM98_22350 IPR008999 Actin cross-linking CLM98_22365 IPR001270 ClpA/B family CLM98_22365 IPR003593 AAA+ ATPase domain CLM98_22365 IPR003959 ATPase, AAA-type, core CLM98_22365 IPR017729 Type VI secretion system, ATPase ClpV1 CLM98_22365 IPR018368 ClpA/B, conserved site 1 CLM98_22365 IPR019489 Clp ATPase, C-terminal CLM98_22365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22365 IPR028299 ClpA/B, conserved site 2 CLM98_22365 IPR036628 CLM98_22365 CLM98_22370 IPR010732 Protein of unknown function DUF1305 CLM98_22375 IPR010272 Type VI secretion system, VCA0110 CLM98_22380 IPR007048 GpW/Gp25/anti-adapter protein IraD CLM98_22380 IPR017737 Type VI secretion system, lysozyme-related protein CLM98_22385 IPR009211 Predicted virulence protein, SciE type CLM98_22385 IPR011990 Tetratricopeptide-like helical domain CLM98_22390 IPR008514 Type VI secretion system effector, Hcp CLM98_22390 IPR036624 CLM98_22390 CLM98_22395 IPR010269 Protein of unknown function DUF877 CLM98_22400 IPR008312 Uncharacterised conserved protein UCP028301 CLM98_22405 IPR009057 Homeodomain-like CLM98_22405 IPR018060 DNA binding HTH domain, AraC-type CLM98_22405 IPR018062 HTH domain AraC-type, conserved site CLM98_22410 IPR006015 Universal stress protein A CLM98_22410 IPR006016 UspA CLM98_22410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_22415 IPR001451 Bacterial transferase hexapeptide repeat CLM98_22415 IPR011004 Trimeric LpxA-like CLM98_22415 IPR018357 Hexapeptide transferase, conserved site CLM98_22415 IPR024688 Maltose/galactoside acetyltransferase CLM98_22420 IPR005753 DNA helicase, ATP-dependent, UvrD type CLM98_22420 IPR013986 DExx box DNA helicase domain CLM98_22420 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_22420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22420 IPR034739 CLM98_22420 CLM98_22425 IPR036188 CLM98_22425 CLM98_22425 IPR038732 CLM98_22425 CLM98_22435 IPR001736 Phospholipase D/Transphosphatidylase CLM98_22435 IPR022924 Cardiolipin synthase CLM98_22435 IPR025202 Phospholipase D-like domain CLM98_22435 IPR027379 Cardiolipin synthase N-terminal CLM98_22440 IPR000847 Transcription regulator HTH, LysR CLM98_22440 IPR005119 LysR, substrate-binding CLM98_22440 IPR036388 CLM98_22440 CLM98_22440 IPR036390 CLM98_22440 CLM98_22445 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CLM98_22445 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase CLM98_22445 IPR036704 CLM98_22445 CLM98_22450 IPR007400 PrpF protein CLM98_22460 IPR006680 Amidohydrolase 1 CLM98_22460 IPR032466 CLM98_22460 CLM98_22465 IPR001705 Ribosomal protein L33 CLM98_22465 IPR011332 Zinc-binding ribosomal protein CLM98_22465 IPR018264 Ribosomal protein L33, conserved site CLM98_22465 IPR038584 CLM98_22465 CLM98_22470 IPR001383 Ribosomal protein L28 CLM98_22470 IPR026569 Ribosomal protein L28/L24 CLM98_22470 IPR034704 CLM98_22470 CLM98_22470 IPR037147 CLM98_22470 CLM98_22475 IPR001036 Acriflavin resistance protein CLM98_22475 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_22475 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_22480 IPR011053 Single hybrid motif CLM98_22480 IPR032317 CLM98_22480 CLM98_22485 IPR003423 Outer membrane efflux protein CLM98_22495 IPR010281 Protein of unknown function DUF885 CLM98_22500 IPR003682 rRNA small subunit methyltransferase G CLM98_22500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_22505 IPR008963 Purple acid phosphatase-like, N-terminal CLM98_22505 IPR018946 Alkaline phosphatase D-related CLM98_22505 IPR032093 CLM98_22505 CLM98_22505 IPR038607 CLM98_22505 CLM98_22510 IPR008963 Purple acid phosphatase-like, N-terminal CLM98_22510 IPR018946 Alkaline phosphatase D-related CLM98_22510 IPR032093 CLM98_22510 CLM98_22510 IPR038607 CLM98_22510 CLM98_22515 IPR008278 4'-phosphopantetheinyl transferase superfamily CLM98_22515 IPR037143 CLM98_22515 CLM98_22520 IPR007341 Transglycosylase-associated protein CLM98_22525 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CLM98_22525 IPR011057 Mss4-like CLM98_22530 IPR004808 AP endonuclease 1 CLM98_22530 IPR005135 Endonuclease/exonuclease/phosphatase CLM98_22530 IPR020847 AP endonuclease 1, binding site CLM98_22530 IPR020848 AP endonuclease 1, conserved site CLM98_22530 IPR036691 CLM98_22530 CLM98_22535 IPR000600 ROK CLM98_22535 IPR036388 CLM98_22535 CLM98_22535 IPR036390 CLM98_22535 CLM98_22545 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLM98_22545 IPR027304 Trigger factor/SurA domain CLM98_22550 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLM98_22550 IPR030395 CLM98_22550 CLM98_22555 IPR001734 Sodium/solute symporter CLM98_22555 IPR018212 Sodium/solute symporter, conserved site CLM98_22555 IPR038377 CLM98_22555 CLM98_22560 IPR007436 Protein of unknown function DUF485 CLM98_22570 IPR000873 AMP-dependent synthetase/ligase CLM98_22570 IPR011904 Acetate-CoA ligase CLM98_22570 IPR020845 AMP-binding, conserved site CLM98_22570 IPR025110 AMP-binding enzyme C-terminal domain CLM98_22570 IPR032387 CLM98_22570 CLM98_22575 IPR000792 Transcription regulator LuxR, C-terminal CLM98_22575 IPR001789 Signal transduction response regulator, receiver domain CLM98_22575 IPR011006 CheY-like superfamily CLM98_22575 IPR016032 Signal transduction response regulator, C-terminal effector CLM98_22575 IPR036388 CLM98_22575 CLM98_22580 IPR025538 Domain of unknown function DUF4424 CLM98_22590 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLM98_22590 IPR017937 Thioredoxin, conserved site CLM98_22590 IPR036249 CLM98_22590 CLM98_22600 IPR006710 Glycoside hydrolase, family 43 CLM98_22600 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_22600 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_22610 IPR023210 NADP-dependent oxidoreductase domain CLM98_22610 IPR036812 CLM98_22610 CLM98_22615 IPR006680 Amidohydrolase 1 CLM98_22615 IPR032466 CLM98_22615 CLM98_22620 IPR002347 Glucose/ribitol dehydrogenase CLM98_22620 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLM98_22620 IPR036291 CLM98_22620 CLM98_22625 IPR011234 Fumarylacetoacetase, C-terminal-related CLM98_22625 IPR036663 CLM98_22625 CLM98_22635 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_22635 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_22635 IPR029017 Enolase N-terminal domain-like CLM98_22635 IPR029065 Enolase C-terminal domain-like CLM98_22635 IPR036849 CLM98_22635 CLM98_22645 IPR008000 Rhamnose mutarotase CLM98_22645 IPR011008 Dimeric alpha-beta barrel CLM98_22650 IPR005275 L-fucose permease FucP CLM98_22650 IPR011701 Major facilitator superfamily CLM98_22650 IPR036259 CLM98_22650 CLM98_22655 IPR005471 Transcription regulator IclR, N-terminal CLM98_22655 IPR014757 Transcription regulator IclR, C-terminal CLM98_22655 IPR029016 GAF domain-like CLM98_22655 IPR036388 CLM98_22655 CLM98_22655 IPR036390 CLM98_22655 CLM98_22660 IPR003810 Domain of unknown function DUF204 CLM98_22660 IPR022929 Putative manganese efflux pump MntP CLM98_22665 IPR000014 PAS domain CLM98_22665 IPR001789 Signal transduction response regulator, receiver domain CLM98_22665 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLM98_22665 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_22665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLM98_22665 IPR011006 CheY-like superfamily CLM98_22665 IPR035965 CLM98_22665 CLM98_22665 IPR036097 CLM98_22665 CLM98_22665 IPR036890 CLM98_22665 CLM98_22665 IPR038377 CLM98_22665 CLM98_22675 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CLM98_22675 IPR031924 CLM98_22675 CLM98_22680 IPR008928 Six-hairpin glycosidase-like CLM98_22680 IPR010383 Glycosyltransferase 36 CLM98_22680 IPR011013 Galactose mutarotase-like domain CLM98_22680 IPR012341 Six-hairpin glycosidase CLM98_22680 IPR033432 CLM98_22680 CLM98_22680 IPR037018 CLM98_22680 CLM98_22685 IPR001927 Sodium:galactoside symporter CLM98_22685 IPR018043 Sodium:galactoside symporter, conserved site CLM98_22685 IPR036259 CLM98_22685 CLM98_22690 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CLM98_22690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22700 IPR002372 Pyrrolo-quinoline quinone repeat CLM98_22700 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLM98_22700 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLM98_22710 IPR036441 CLM98_22710 CLM98_22720 IPR007452 Protein of unknown function DUF490 CLM98_22725 IPR000184 Bacterial surface antigen (D15) CLM98_22725 IPR010827 Surface antigen variable number CLM98_22725 IPR035243 CLM98_22725 CLM98_22750 IPR008909 DALR anticodon binding CLM98_22750 IPR015944 Glycine-tRNA ligase, beta subunit CLM98_22755 IPR002310 Glycine-tRNA ligase, alpha subunit CLM98_22760 IPR001482 Type II secretion system protein E CLM98_22760 IPR003593 AAA+ ATPase domain CLM98_22760 IPR007831 General secretory system II, protein E, N-terminal CLM98_22760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_22760 IPR037257 CLM98_22760 CLM98_22765 IPR011989 Armadillo-like helical CLM98_22765 IPR016024 Armadillo-type fold CLM98_22775 IPR017926 Glutamine amidotransferase CLM98_22775 IPR029062 Class I glutamine amidotransferase-like CLM98_22785 IPR002033 Sec-independent periplasmic protein translocase TatC CLM98_22785 IPR019820 Sec-independent periplasmic protein translocase, conserved site CLM98_22790 IPR003369 Sec-independent protein translocase protein TatA/B/E CLM98_22790 IPR018448 Twin-arginine translocation protein TatB CLM98_22795 IPR003369 Sec-independent protein translocase protein TatA/B/E CLM98_22795 IPR006312 Sec-independent protein translocase protein TatA/E CLM98_22800 IPR007461 Ysc84 actin-binding domain CLM98_22805 IPR001015 Ferrochelatase CLM98_22805 IPR019772 Ferrochelatase, active site CLM98_22810 IPR000073 Alpha/beta hydrolase fold-1 CLM98_22810 IPR029058 Alpha/Beta hydrolase fold CLM98_22820 IPR002725 Protein of unknown function DUF45 CLM98_22830 IPR007476 Putative exonuclease, RdgC CLM98_22835 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLM98_22835 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CLM98_22835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_22835 IPR035107 CLM98_22835 CLM98_22845 IPR001998 Xylose isomerase CLM98_22845 IPR013452 Xylose isomerase, bacterial-type CLM98_22845 IPR036237 CLM98_22845 CLM98_22850 IPR000843 Transcription regulator HTH, LacI CLM98_22850 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_22850 IPR028082 Periplasmic binding protein-like I CLM98_22855 IPR005154 Alpha glucuronidase, N-terminal CLM98_22855 IPR011099 Glycosyl hydrolase family 67, C-terminal CLM98_22855 IPR011100 Glycosyl hydrolase family 67 middle CLM98_22855 IPR011395 Alpha glucuronidase CLM98_22855 IPR017853 Glycoside hydrolase, superfamily CLM98_22855 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CLM98_22855 IPR037054 CLM98_22855 CLM98_22860 IPR005181 Domain of unknown function DUF303, acetylesterase putative CLM98_22860 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_22860 IPR008979 Galactose-binding domain-like CLM98_22860 IPR036514 CLM98_22860 CLM98_22865 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLM98_22865 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLM98_22865 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLM98_22865 IPR029017 Enolase N-terminal domain-like CLM98_22865 IPR029065 Enolase C-terminal domain-like CLM98_22865 IPR036849 CLM98_22865 CLM98_22870 IPR006710 Glycoside hydrolase, family 43 CLM98_22870 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLM98_22870 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_22875 IPR001764 Glycoside hydrolase, family 3, N-terminal CLM98_22875 IPR002772 Glycoside hydrolase family 3 C-terminal domain CLM98_22875 IPR011658 PA14 CLM98_22875 IPR013783 Immunoglobulin-like fold CLM98_22875 IPR017853 Glycoside hydrolase, superfamily CLM98_22875 IPR026891 Fibronectin type III-like domain CLM98_22875 IPR036881 CLM98_22875 CLM98_22875 IPR036962 CLM98_22875 CLM98_22880 IPR000669 Mannitol dehydrogenase CLM98_22880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLM98_22880 IPR013118 Mannitol dehydrogenase, C-terminal CLM98_22880 IPR013131 Mannitol dehydrogenase, N-terminal CLM98_22880 IPR013328 Dehydrogenase, multihelical CLM98_22880 IPR036291 CLM98_22880 CLM98_22885 IPR000335 Bleomycin resistance protein CLM98_22885 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLM98_22890 IPR017136 Uncharacterised conserved protein UCP037205 CLM98_22905 IPR006652 Kelch repeat type 1 CLM98_22905 IPR015915 Kelch-type beta propeller CLM98_22910 IPR001647 DNA-binding HTH domain, TetR-type CLM98_22910 IPR009057 Homeodomain-like CLM98_22910 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLM98_22915 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CLM98_22915 IPR015590 Aldehyde dehydrogenase domain CLM98_22915 IPR016160 Aldehyde dehydrogenase, cysteine active site CLM98_22915 IPR016161 Aldehyde/histidinol dehydrogenase CLM98_22915 IPR016162 Aldehyde dehydrogenase, N-terminal CLM98_22915 IPR016163 Aldehyde dehydrogenase, C-terminal CLM98_22915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLM98_22920 IPR036259 CLM98_22920 CLM98_22925 IPR036409 CLM98_22925 CLM98_22935 IPR001303 Class II aldolase/adducin N-terminal CLM98_22935 IPR036409 CLM98_22935 CLM98_22940 IPR000577 CLM98_22940 CLM98_22940 IPR018181 Heat shock protein 70, conserved site CLM98_22940 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLM98_22940 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLM98_22945 IPR010239 Conserved hypothetical protein CHP02001 CLM98_22950 IPR019223 Domain of unknown function DUF2147 CLM98_22960 IPR005511 Senescence marker protein-30 (SMP-30) CLM98_22960 IPR011042 Six-bladed beta-propeller, TolB-like CLM98_22960 IPR013658 SMP-30/Gluconolactonase/LRE-like region CLM98_22965 IPR001000 Glycoside hydrolase, family 10 CLM98_22965 IPR017853 Glycoside hydrolase, superfamily CLM98_22965 IPR031158 CLM98_22965 CLM98_22970 IPR006101 Glycoside hydrolase, family 2 CLM98_22970 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CLM98_22970 IPR006103 Glycoside hydrolase, family 2, TIM barrel CLM98_22970 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CLM98_22970 IPR008979 Galactose-binding domain-like CLM98_22970 IPR013783 Immunoglobulin-like fold CLM98_22970 IPR017853 Glycoside hydrolase, superfamily CLM98_22970 IPR023232 Glycoside hydrolase, family 2, active site CLM98_22970 IPR032311 CLM98_22970 CLM98_22970 IPR036156 CLM98_22970 CLM98_22975 IPR003766 Uronate isomerase CLM98_22975 IPR032466 CLM98_22975 CLM98_22985 IPR036259 CLM98_22985 CLM98_22990 IPR001000 Glycoside hydrolase, family 10 CLM98_22990 IPR017853 Glycoside hydrolase, superfamily CLM98_22995 IPR011701 Major facilitator superfamily CLM98_22995 IPR036259 CLM98_22995 CLM98_23000 IPR000531 TonB-dependent receptor, beta-barrel CLM98_23000 IPR010104 Bacterial TonB-dependent receptor CLM98_23000 IPR010917 TonB-dependent receptor, conserved site CLM98_23000 IPR012910 TonB-dependent receptor, plug CLM98_23000 IPR037066 CLM98_23000 CLM98_23005 IPR036259 CLM98_23005 CLM98_23010 IPR006710 Glycoside hydrolase, family 43 CLM98_23010 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CLM98_23015 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CLM98_23015 IPR002446 Lipocalin, bacterial CLM98_23015 IPR012674 Calycin CLM98_23015 IPR022271 Lipocalin, ApoD type CLM98_23020 IPR009671 Regulator of ribonuclease activity B domain CLM98_23020 IPR036701 CLM98_23020 CLM98_23050 IPR004919 Domain of unknown function DUF262 CLM98_23060 IPR007420 Protein of unknown function DUF465 CLM98_23065 IPR011032 GroES (chaperonin 10)-like CLM98_23065 IPR013149 Alcohol dehydrogenase, C-terminal CLM98_23065 IPR013154 Alcohol dehydrogenase GroES-like CLM98_23065 IPR020843 Polyketide synthase, enoylreductase CLM98_23065 IPR036291 CLM98_23065 CLM98_23070 IPR002123 Phospholipid/glycerol acyltransferase CLM98_23070 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CLM98_23070 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CLM98_23085 IPR000843 Transcription regulator HTH, LacI CLM98_23085 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_23085 IPR028082 Periplasmic binding protein-like I CLM98_23090 IPR000531 TonB-dependent receptor, beta-barrel CLM98_23090 IPR013784 Carbohydrate-binding-like fold CLM98_23095 IPR000531 TonB-dependent receptor, beta-barrel CLM98_23095 IPR013784 Carbohydrate-binding-like fold CLM98_23100 IPR006905 Tryptophan halogenase CLM98_23100 IPR033856 CLM98_23100 CLM98_23100 IPR036188 CLM98_23100 CLM98_23105 IPR001754 Orotidine 5'-phosphate decarboxylase domain CLM98_23105 IPR011060 Ribulose-phosphate binding barrel CLM98_23105 IPR013785 Aldolase-type TIM barrel CLM98_23105 IPR014732 Orotidine 5'-phosphate decarboxylase CLM98_23105 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CLM98_23110 IPR005519 Acid phosphatase (Class B) CLM98_23110 IPR006423 5-nucleotidase lipoprotein e(P4) CLM98_23110 IPR023214 HAD-like domain CLM98_23110 IPR036412 CLM98_23110 CLM98_23120 IPR007432 Protein of unknown function DUF480 CLM98_23120 IPR036388 CLM98_23120 CLM98_23120 IPR036390 CLM98_23120 CLM98_23125 IPR025368 Protein of unknown function DUF4272 CLM98_23130 IPR000182 GNAT domain CLM98_23130 IPR016181 Acyl-CoA N-acyltransferase CLM98_23135 IPR005752 DNA helicase, ATP-dependent, RepA type CLM98_23135 IPR013986 DExx box DNA helicase domain CLM98_23135 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_23135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23135 IPR034739 CLM98_23135 CLM98_23140 IPR001267 Thymidine kinase CLM98_23140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23145 IPR003018 GAF domain CLM98_23145 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLM98_23145 IPR029016 GAF domain-like CLM98_23145 IPR036097 CLM98_23145 CLM98_23145 IPR036890 CLM98_23145 CLM98_23150 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CLM98_23150 IPR011013 Galactose mutarotase-like domain CLM98_23150 IPR013783 Immunoglobulin-like fold CLM98_23150 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CLM98_23150 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CLM98_23150 IPR014756 Immunoglobulin E-set CLM98_23150 IPR023724 Glucan biosynthesis, MdoD CLM98_23155 IPR025488 Protein of unknown function DUF4380 CLM98_23160 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CLM98_23160 IPR010979 Ribosomal protein S13-like, H2TH CLM98_23160 IPR012319 DNA glycosylase/AP lyase, catalytic domain CLM98_23160 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CLM98_23160 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CLM98_23160 IPR020629 Formamidopyrimidine-DNA glycosylase CLM98_23160 IPR035937 CLM98_23160 CLM98_23165 IPR002104 Integrase, catalytic CLM98_23165 IPR010998 Integrase, Lambda-type, N-terminal CLM98_23165 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23165 IPR013762 Integrase-like, catalytic core CLM98_23185 IPR003477 mRNA interferase PemK-like protein CLM98_23185 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLM98_23200 IPR007560 Restriction endonuclease type IV, Mrr CLM98_23200 IPR011335 Restriction endonuclease type II-like CLM98_23205 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_23205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23215 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like CLM98_23215 IPR036614 CLM98_23215 CLM98_23225 IPR003959 ATPase, AAA-type, core CLM98_23225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23235 IPR016634 Transcription regulator, DeoR type, predicted CLM98_23235 IPR026881 WYL domain CLM98_23245 IPR000594 UBA/THIF-type NAD/FAD binding fold CLM98_23245 IPR028090 JAB domain, prokaryotic CLM98_23245 IPR032865 CLM98_23245 CLM98_23245 IPR035985 CLM98_23245 CLM98_23250 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_23250 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_23255 IPR002500 Phosphoadenosine phosphosulphate reductase CLM98_23255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLM98_23275 IPR003115 ParB/Sulfiredoxin CLM98_23275 IPR036086 CLM98_23275 CLM98_23285 IPR036890 CLM98_23285 CLM98_23300 IPR006555 ATP-dependent helicase, C-terminal CLM98_23300 IPR010614 DEAD2 CLM98_23300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23320 IPR001789 Signal transduction response regulator, receiver domain CLM98_23320 IPR011006 CheY-like superfamily CLM98_23340 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CLM98_23340 IPR012336 Thioredoxin-like fold CLM98_23340 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLM98_23340 IPR036249 CLM98_23340 CLM98_23345 IPR006260 TonB, C-terminal CLM98_23345 IPR037682 CLM98_23345 CLM98_23360 IPR025109 Domain of unknown function DUF4031 CLM98_23365 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLM98_23375 IPR000119 Histone-like bacterial DNA-binding protein CLM98_23375 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLM98_23380 IPR003156 DHHA1 domain CLM98_23380 IPR038763 CLM98_23380 CLM98_23395 IPR007476 Putative exonuclease, RdgC CLM98_23400 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CLM98_23400 IPR035437 CLM98_23400 CLM98_23420 IPR001478 PDZ domain CLM98_23420 IPR036034 CLM98_23420 CLM98_23425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23435 IPR000330 SNF2-related CLM98_23435 IPR001650 Helicase, C-terminal CLM98_23435 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_23435 IPR007848 Methyltransferase small domain CLM98_23435 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_23435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_23435 IPR038718 CLM98_23435 CLM98_23450 IPR001001 DNA polymerase III, beta chain CLM98_23450 IPR022634 DNA polymerase III, beta chain, N-terminal CLM98_23450 IPR022635 DNA polymerase III, beta chain, C-terminal CLM98_23450 IPR022637 DNA polymerase III, beta chain, central CLM98_23455 IPR003115 ParB/Sulfiredoxin CLM98_23455 IPR004437 ParB/RepB/Spo0J partition protein family CLM98_23455 IPR022396 ParB-related, ThiF-related cassette, ParB CLM98_23455 IPR036086 CLM98_23455 CLM98_23460 IPR022273 ParB-related, ThiF-related cassette, protein E CLM98_23465 IPR032866 CLM98_23465 CLM98_23475 IPR022280 ParB-related, ThiF-related cassette, protein B CLM98_23475 IPR032787 CLM98_23475 CLM98_23480 IPR018560 Domain of unknown function DUF2016 CLM98_23480 IPR022499 ParB-related, ThiF-related cassette, protein A CLM98_23480 IPR028090 JAB domain, prokaryotic CLM98_23485 IPR000594 UBA/THIF-type NAD/FAD binding fold CLM98_23485 IPR022500 ParB-related, ThiF-related cassette, ThiF CLM98_23485 IPR035985 CLM98_23485 CLM98_23490 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_23490 IPR011344 Single-stranded DNA-binding protein CLM98_23490 IPR012340 Nucleic acid-binding, OB-fold CLM98_23495 IPR002104 Integrase, catalytic CLM98_23495 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23495 IPR013762 Integrase-like, catalytic core CLM98_23500 IPR002104 Integrase, catalytic CLM98_23500 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23500 IPR013762 Integrase-like, catalytic core CLM98_23505 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLM98_23515 IPR003356 DNA methylase, adenine-specific CLM98_23515 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLM98_23515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLM98_23525 IPR006935 Helicase/UvrB domain CLM98_23525 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CLM98_23525 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_23525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23550 IPR001650 Helicase, C-terminal CLM98_23550 IPR006935 Helicase/UvrB domain CLM98_23550 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLM98_23550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23555 IPR006597 Sel1-like CLM98_23555 IPR011990 Tetratricopeptide-like helical domain CLM98_23560 IPR003607 HD/PDEase domain CLM98_23560 IPR011119 Uncharacterised domain, helicase/relaxase, putative CLM98_23565 IPR019476 Type IV secretion system, TraD, DNA-binding domain CLM98_23565 IPR022458 Conjugative coupling factor TraG/TraD CLM98_23565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23565 IPR032689 CLM98_23565 CLM98_23570 IPR022266 Integrating conjugative element protein, PFL4697-type CLM98_23575 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23580 IPR013986 DExx box DNA helicase domain CLM98_23580 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_23580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23600 IPR000424 Primosome PriB/single-strand DNA-binding CLM98_23600 IPR012340 Nucleic acid-binding, OB-fold CLM98_23610 IPR038726 CLM98_23610 CLM98_23620 IPR011704 ATPase, dynein-related, AAA domain CLM98_23620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23630 IPR021496 Protein of unknown function DUF3150 CLM98_23635 IPR036465 CLM98_23635 CLM98_23640 IPR006171 Toprim domain CLM98_23640 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal CLM98_23650 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CLM98_23650 IPR036929 CLM98_23650 CLM98_23655 IPR013986 DExx box DNA helicase domain CLM98_23655 IPR014017 DNA helicase, UvrD-like, C-terminal CLM98_23655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23655 IPR034739 CLM98_23655 CLM98_23680 IPR012433 Protein of unknown function DUF1629 CLM98_23725 IPR012337 Ribonuclease H-like domain CLM98_23725 IPR033390 CLM98_23725 CLM98_23725 IPR036397 CLM98_23725 CLM98_23740 IPR003423 Outer membrane efflux protein CLM98_23745 IPR006143 RND efflux pump, membrane fusion protein CLM98_23745 IPR032317 CLM98_23745 CLM98_23750 IPR001036 Acriflavin resistance protein CLM98_23750 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_23750 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_23755 IPR019613 Protein of unknown function DUF4198 CLM98_23760 IPR000531 TonB-dependent receptor, beta-barrel CLM98_23760 IPR036942 CLM98_23760 CLM98_23765 IPR006035 Ureohydrolase CLM98_23765 IPR023696 Ureohydrolase domain CLM98_23770 IPR005183 Domain of unknown function DUF305 CLM98_23770 IPR012347 Ferritin-related CLM98_23775 IPR002048 EF-hand domain CLM98_23775 IPR011992 EF-hand domain pair CLM98_23775 IPR018247 EF-Hand 1, calcium-binding site CLM98_23780 IPR001757 Cation-transporting P-type ATPase CLM98_23780 IPR008250 P-type ATPase, A domain CLM98_23780 IPR018303 P-type ATPase, phosphorylation site CLM98_23780 IPR023214 HAD-like domain CLM98_23780 IPR023298 P-type ATPase, transmembrane domain CLM98_23780 IPR023299 P-type ATPase, cytoplasmic domain N CLM98_23780 IPR027256 Cation-transporting P-type ATPase, subfamily IB CLM98_23780 IPR036412 CLM98_23780 CLM98_23785 IPR008457 Copper resistance D CLM98_23790 IPR007348 CopC domain CLM98_23790 IPR014756 Immunoglobulin E-set CLM98_23800 IPR007332 Protein of unknown function DUF411 CLM98_23805 IPR032710 CLM98_23805 CLM98_23805 IPR037401 CLM98_23805 CLM98_23810 IPR009056 Cytochrome c-like domain CLM98_23810 IPR036909 CLM98_23810 CLM98_23815 IPR007939 Copper resistance B precursor CLM98_23820 IPR001117 Multicopper oxidase, type 1 CLM98_23820 IPR002355 Multicopper oxidase, copper-binding site CLM98_23820 IPR006376 Copper-resistance protein CopA CLM98_23820 IPR008972 Cupredoxin CLM98_23820 IPR011706 Multicopper oxidase, type 2 CLM98_23820 IPR011707 Multicopper oxidase, type 3 CLM98_23820 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLM98_23820 IPR033138 CLM98_23820 CLM98_23830 IPR001387 Cro/C1-type helix-turn-helix domain CLM98_23830 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_23840 IPR012337 Ribonuclease H-like domain CLM98_23840 IPR033390 CLM98_23840 CLM98_23840 IPR036397 CLM98_23840 CLM98_23850 IPR004027 SEC-C motif CLM98_23855 IPR003735 Metal-sensitive transcriptional repressor CLM98_23855 IPR038390 CLM98_23855 CLM98_23860 IPR002524 Cation efflux protein CLM98_23860 IPR027469 Cation efflux protein transmembrane domain CLM98_23865 IPR010710 Protein of unknown function DUF1289 CLM98_23875 IPR003959 ATPase, AAA-type, core CLM98_23875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23875 IPR038729 CLM98_23875 CLM98_23880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_23885 IPR001845 HTH ArsR-type DNA-binding domain CLM98_23885 IPR036388 CLM98_23885 CLM98_23885 IPR036390 CLM98_23885 CLM98_23890 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLM98_23890 IPR036196 CLM98_23890 CLM98_23895 IPR006659 Arsenate reductase CLM98_23895 IPR006660 Arsenate reductase-like CLM98_23895 IPR036249 CLM98_23895 CLM98_23900 IPR005025 NADPH-dependent FMN reductase-like CLM98_23900 IPR014063 Arsenate resistance ArsH CLM98_23900 IPR029039 Flavoprotein-like CLM98_23905 IPR000802 Arsenical pump membrane protein, ArsB CLM98_23915 IPR001036 Acriflavin resistance protein CLM98_23915 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CLM98_23915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLM98_23920 IPR006143 RND efflux pump, membrane fusion protein CLM98_23920 IPR011053 Single hybrid motif CLM98_23920 IPR032317 CLM98_23920 CLM98_23925 IPR003423 Outer membrane efflux protein CLM98_23935 IPR002524 Cation efflux protein CLM98_23935 IPR027469 Cation efflux protein transmembrane domain CLM98_23940 IPR000551 MerR-type HTH domain CLM98_23940 IPR009061 DNA binding domain, putative CLM98_23940 IPR015358 Transcription regulator MerR, DNA binding CLM98_23945 IPR002104 Integrase, catalytic CLM98_23945 IPR010998 Integrase, Lambda-type, N-terminal CLM98_23945 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_23945 IPR013762 Integrase-like, catalytic core CLM98_23950 IPR002513 Tn3 transposase DDE domain CLM98_23950 IPR025296 Domain of unknown function DUF4158 CLM98_23955 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_23955 IPR039554 CLM98_23955 CLM98_23960 IPR009241 Addiction module killer protein CLM98_23965 IPR003115 ParB/Sulfiredoxin CLM98_23965 IPR036086 CLM98_23965 CLM98_23970 IPR015927 Peptidase S24/S26A/S26B/S26C CLM98_23970 IPR036286 CLM98_23970 CLM98_23975 IPR001126 DNA-repair protein, UmuC-like CLM98_23975 IPR017961 DNA polymerase, Y-family, little finger domain CLM98_23975 IPR025188 Domain of unknown function DUF4113 CLM98_23995 IPR021104 KfrA, N-terminal DNA-binding domain CLM98_24085 IPR002104 Integrase, catalytic CLM98_24085 IPR010998 Integrase, Lambda-type, N-terminal CLM98_24085 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_24085 IPR013762 Integrase-like, catalytic core CLM98_24105 IPR007895 MASE1 CLM98_24115 IPR003346 Transposase, IS116/IS110/IS902 CLM98_24120 IPR002110 Ankyrin repeat CLM98_24120 IPR020683 Ankyrin repeat-containing domain CLM98_24120 IPR036770 CLM98_24120 CLM98_24140 IPR003644 Na-Ca exchanger/integrin-beta4 CLM98_24140 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CLM98_24140 IPR038081 CLM98_24140 CLM98_24150 IPR009649 TraU CLM98_24155 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CLM98_24160 IPR019533 Peptidase S26 CLM98_24160 IPR036286 CLM98_24160 CLM98_24170 IPR014117 Type-IV secretion system protein TraC CLM98_24170 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CLM98_24170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24180 IPR014118 Type IV conjugative transfer system protein TraV CLM98_24185 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLM98_24190 IPR010563 Pilus assembly TraK CLM98_24195 IPR007973 Pilus assembly TraE CLM98_24200 IPR009838 Type IV conjugative transfer system, protein TraL CLM98_24215 IPR012931 TraG-like, N-terminal CLM98_24220 IPR010927 Type IV conjugative transfer system protein TraH CLM98_24225 IPR036249 CLM98_24225 CLM98_24225 IPR039555 CLM98_24225 CLM98_24245 IPR003115 ParB/Sulfiredoxin CLM98_24245 IPR036086 CLM98_24245 CLM98_24250 IPR025669 AAA domain CLM98_24250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24255 IPR010751 TrfA CLM98_24285 IPR002142 Peptidase S49 CLM98_24285 IPR029045 ClpP/crotonase-like domain CLM98_24295 IPR038726 CLM98_24295 CLM98_24310 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_24380 IPR025669 AAA domain CLM98_24380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24385 IPR003115 ParB/Sulfiredoxin CLM98_24385 IPR004437 ParB/RepB/Spo0J partition protein family CLM98_24385 IPR013741 Transcriptional repressor protein KorB CLM98_24385 IPR036086 CLM98_24385 CLM98_24390 IPR032428 CLM98_24390 CLM98_24415 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CLM98_24420 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CLM98_24425 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CLM98_24425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24430 IPR014158 Type IV secretion system, VirB5 CLM98_24430 IPR023220 Type IV secretion system, VirB5-domain CLM98_24445 IPR007688 Conjugal transfer, TrbL/VirB6 CLM98_24450 IPR007430 Bacterial virulence protein VirB8 CLM98_24450 IPR032710 CLM98_24450 CLM98_24455 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CLM98_24455 IPR014148 P-type conjugative transfer protein VirB9 CLM98_24455 IPR038161 CLM98_24455 CLM98_24460 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLM98_24465 IPR001482 Type II secretion system protein E CLM98_24465 IPR014155 Type IV secretion system protein VirB11 CLM98_24465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24470 IPR008258 Lytic transglycosylase-like SLT domain CLM98_24470 IPR023346 Lysozyme-like domain CLM98_24485 IPR021558 Protein of unknown function DUF3018 CLM98_24490 IPR003477 mRNA interferase PemK-like protein CLM98_24490 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLM98_24495 IPR014059 Conjugative relaxase, N-terminal CLM98_24495 IPR014862 TrwC relaxase CLM98_24495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24495 IPR027785 UvrD-like helicase C-terminal domain CLM98_24500 IPR019476 Type IV secretion system, TraD, DNA-binding domain CLM98_24500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24545 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_24555 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_24555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24570 IPR004322 Plasmid replicase, bacterial CLM98_24570 IPR014820 Primase, C-terminal 1 CLM98_24575 IPR005042 Avirulence protein PthA-related, Xanthomonas species CLM98_24590 IPR012912 Plasmid pRiA4b, Orf3 CLM98_24590 IPR024047 Protein MM3350-like domain CLM98_24600 IPR003477 mRNA interferase PemK-like protein CLM98_24600 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLM98_24605 IPR037914 CLM98_24605 CLM98_24610 IPR006118 Recombinase, conserved site CLM98_24610 IPR006119 Resolvase, N-terminal CLM98_24610 IPR036162 CLM98_24610 CLM98_24625 IPR004027 SEC-C motif CLM98_24625 IPR011978 Uncharacterised protein family UPF0149 CLM98_24625 IPR036255 CLM98_24625 CLM98_24630 IPR002559 Transposase, IS4-like CLM98_24630 IPR012337 Ribonuclease H-like domain CLM98_24645 IPR002716 PIN domain CLM98_24645 IPR002850 PIN family, putative toxin-antitoxin system toxin component CLM98_24645 IPR029060 PIN domain-like CLM98_24650 IPR013321 Arc-type ribbon-helix-helix CLM98_24650 IPR031914 CLM98_24650 CLM98_24655 IPR006118 Recombinase, conserved site CLM98_24655 IPR006119 Resolvase, N-terminal CLM98_24655 IPR036162 CLM98_24655 CLM98_24660 IPR006120 Resolvase, HTH domain CLM98_24685 IPR001915 Peptidase M48 CLM98_24700 IPR002477 Peptidoglycan binding-like CLM98_24700 IPR011970 Lytic murein transglycosylase CLM98_24700 IPR023346 Lysozyme-like domain CLM98_24700 IPR031304 CLM98_24700 CLM98_24700 IPR036365 CLM98_24700 CLM98_24700 IPR036366 CLM98_24700 CLM98_24705 IPR002513 Tn3 transposase DDE domain CLM98_24705 IPR025296 Domain of unknown function DUF4158 CLM98_24710 IPR002104 Integrase, catalytic CLM98_24710 IPR010998 Integrase, Lambda-type, N-terminal CLM98_24710 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLM98_24710 IPR013762 Integrase-like, catalytic core CLM98_24715 IPR021104 KfrA, N-terminal DNA-binding domain CLM98_24750 IPR005042 Avirulence protein PthA-related, Xanthomonas species CLM98_24755 IPR004322 Plasmid replicase, bacterial CLM98_24755 IPR014820 Primase, C-terminal 1 CLM98_24770 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_24770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24780 IPR010982 Lambda repressor-like, DNA-binding domain CLM98_24825 IPR002716 PIN domain CLM98_24825 IPR029060 PIN domain-like CLM98_24830 IPR007159 AbrB-like domain CLM98_24830 IPR037914 CLM98_24830 CLM98_24835 IPR006118 Recombinase, conserved site CLM98_24835 IPR006119 Resolvase, N-terminal CLM98_24835 IPR009057 Homeodomain-like CLM98_24835 IPR036162 CLM98_24835 CLM98_24855 IPR021104 KfrA, N-terminal DNA-binding domain CLM98_24860 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLM98_24860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLM98_24865 IPR010985 Ribbon-helix-helix CLM98_24865 IPR013321 Arc-type ribbon-helix-helix CLM98_24865 IPR015354 DNA partition complex, ParG CLM98_24875 IPR005042 Avirulence protein PthA-related, Xanthomonas species CLM98_24880 IPR006118 Recombinase, conserved site CLM98_24880 IPR006119 Resolvase, N-terminal CLM98_24880 IPR036162 CLM98_24880 CLM98_24885 IPR013321 Arc-type ribbon-helix-helix CLM98_24885 IPR031914 CLM98_24885 CLM98_24890 IPR002716 PIN domain CLM98_24890 IPR002850 PIN family, putative toxin-antitoxin system toxin component CLM98_24890 IPR029060 PIN domain-like CLM98_24900 IPR004027 SEC-C motif CLM98_24900 IPR011978 Uncharacterised protein family UPF0149 CLM98_24900 IPR036255 CLM98_24900 CLM98_24910 IPR005042 Avirulence protein PthA-related, Xanthomonas species CLM98_24955 IPR010488 Zeta toxin domain CLM98_24955 IPR027417 P-loop containing nucleoside triphosphate hydrolase