CLM98_00015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_00015 SM00091 PAS domain CLM98_00070 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_00105 SM00155 Phospholipase D. Active site motifs. CLM98_00185 SM00796 Allophanate hydrolase subunit 1 CLM98_00185 SM00797 Allophanate hydrolase subunit 2 CLM98_00185 SM00878 Biotin carboxylase C-terminal domain CLM98_00245 SM00382 ATPases associated with a variety of cellular activities CLM98_00295 SM00829 Enoylreductase CLM98_00345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_00345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_00345 SM00091 PAS domain CLM98_00345 SM00267 diguanylate cyclase CLM98_00375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CLM98_00410 SM00014 Acid phosphatase homologues CLM98_00420 SM00028 Tetratricopeptide repeats CLM98_00445 SM00382 ATPases associated with a variety of cellular activities CLM98_00445 SM00760 Bacterial dnaA protein helix-turn-helix domain CLM98_00450 SM00480 DNA polymerase III beta subunit CLM98_00460 SM00387 Histidine kinase-like ATPases CLM98_00460 SM00433 TopoisomeraseII CLM98_00475 SM00028 Tetratricopeptide repeats CLM98_00510 SM00155 Phospholipase D. Active site motifs. CLM98_00525 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_00555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_00555 SM00245 tail specific protease CLM98_00610 SM00829 Enoylreductase CLM98_00740 SM00382 ATPases associated with a variety of cellular activities CLM98_00865 SM00487 DEAD-like helicases superfamily CLM98_00865 SM00490 helicase superfamily c-terminal domain CLM98_00890 SM00822 CLM98_00890 CLM98_00895 SM00822 CLM98_00895 CLM98_01185 SM00421 helix_turn_helix, Lux Regulon CLM98_01185 SM00448 cheY-homologous receiver domain CLM98_01205 SM00862 Transcriptional regulatory protein, C terminal CLM98_01285 SM00642 Alpha-amylase domain CLM98_01290 SM00642 Alpha-amylase domain CLM98_01295 SM00642 Alpha-amylase domain CLM98_01345 SM00354 helix_turn _helix lactose operon repressor CLM98_01390 SM00344 helix_turn_helix ASNC type CLM98_01410 SM00382 ATPases associated with a variety of cellular activities CLM98_01425 SM00382 ATPases associated with a variety of cellular activities CLM98_01460 SM00530 Helix-turn-helix XRE-family like proteins CLM98_01490 SM00855 Phosphoglycerate mutase family CLM98_01495 SM00867 YceI-like domain CLM98_01500 SM00155 Phospholipase D. Active site motifs. CLM98_01510 SM00563 Phosphate acyltransferases CLM98_01525 SM00028 Tetratricopeptide repeats CLM98_01535 SM00829 Enoylreductase CLM98_01555 SM01230 CLM98_01555 CLM98_01560 SM00938 Nitrogen regulatory protein P-II CLM98_01570 SM00387 Histidine kinase-like ATPases CLM98_01570 SM00388 His Kinase A (phosphoacceptor) domain CLM98_01575 SM00382 ATPases associated with a variety of cellular activities CLM98_01575 SM00448 cheY-homologous receiver domain CLM98_01640 SM00450 Rhodanese Homology Domain CLM98_01670 SM00387 Histidine kinase-like ATPases CLM98_01670 SM00388 His Kinase A (phosphoacceptor) domain CLM98_01675 SM00382 ATPases associated with a variety of cellular activities CLM98_01675 SM00448 cheY-homologous receiver domain CLM98_01790 SM00563 Phosphate acyltransferases CLM98_01825 SM00342 helix_turn_helix, arabinose operon control protein CLM98_01850 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_01850 SM00267 diguanylate cyclase CLM98_01875 SM00878 Biotin carboxylase C-terminal domain CLM98_01900 SM00953 CLM98_01900 CLM98_01945 SM00833 Cobalamin synthesis protein cobW C-terminal domain CLM98_01970 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_02005 SM00829 Enoylreductase CLM98_02035 SM00487 DEAD-like helicases superfamily CLM98_02035 SM00490 helicase superfamily c-terminal domain CLM98_02035 SM00847 Helicase associated domain (HA2) Add an annotation CLM98_02170 SM00422 helix_turn_helix, mercury resistance CLM98_02205 SM00448 cheY-homologous receiver domain CLM98_02205 SM00862 Transcriptional regulatory protein, C terminal CLM98_02210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_02210 SM00387 Histidine kinase-like ATPases CLM98_02210 SM00388 His Kinase A (phosphoacceptor) domain CLM98_02350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_02355 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_02375 SM00342 helix_turn_helix, arabinose operon control protein CLM98_02405 SM00420 helix_turn_helix, Deoxyribose operon repressor CLM98_02405 SM01134 CLM98_02405 CLM98_02420 SM00882 Coenzyme A transferase CLM98_02425 SM00882 Coenzyme A transferase CLM98_02445 SM00998 Adenylosuccinate lyase C-terminus CLM98_02465 SM00346 helix_turn_helix isocitrate lyase regulation CLM98_02470 SM00090 RIO-like kinase CLM98_02485 SM01228 CLM98_02485 CLM98_02540 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_02540 SM00876 Biotin and Thiamin Synthesis associated domain CLM98_02565 SM00369 Leucine-rich repeats, typical (most populated) subfamily CLM98_02670 SM00382 ATPases associated with a variety of cellular activities CLM98_02735 SM00267 diguanylate cyclase CLM98_02745 SM00642 Alpha-amylase domain CLM98_02750 SM00642 Alpha-amylase domain CLM98_02760 SM00642 Alpha-amylase domain CLM98_02770 SM00642 Alpha-amylase domain CLM98_02825 SM00822 CLM98_02825 CLM98_02835 SM00487 DEAD-like helicases superfamily CLM98_02835 SM00490 helicase superfamily c-terminal domain CLM98_02845 SM00326 Src homology 3 domains CLM98_02850 SM00861 Transketolase, pyrimidine binding domain CLM98_02860 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CLM98_02880 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_02990 SM00271 DnaJ molecular chaperone homology domain CLM98_03010 SM00046 Diacylglycerol kinase catalytic domain (presumed) CLM98_03030 SM00903 Flavin reductase like domain CLM98_03050 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_03050 SM00419 helix_turn_helix, cAMP Regulatory protein CLM98_03105 SM00387 Histidine kinase-like ATPases CLM98_03105 SM00388 His Kinase A (phosphoacceptor) domain CLM98_03105 SM00448 cheY-homologous receiver domain CLM98_03110 SM00052 Putative diguanylate phosphodiesterase CLM98_03110 SM00267 diguanylate cyclase CLM98_03110 SM00448 cheY-homologous receiver domain CLM98_03180 SM00563 Phosphate acyltransferases CLM98_03205 SM01209 CLM98_03205 CLM98_03205 SM01210 CLM98_03205 CLM98_03215 SM00798 AICARFT/IMPCHase bienzyme CLM98_03215 SM00851 MGS-like domain CLM98_03230 SM00195 Dual specificity phosphatase, catalytic domain CLM98_03250 SM00563 Phosphate acyltransferases CLM98_03270 SM00530 Helix-turn-helix XRE-family like proteins CLM98_03305 SM00878 Biotin carboxylase C-terminal domain CLM98_03335 SM00342 helix_turn_helix, arabinose operon control protein CLM98_03345 SM00234 in StAR and phosphatidylcholine transfer protein CLM98_03375 SM00883 Chaperonin 10 Kd subunit CLM98_03435 SM00944 Pro-kumamolisin, activation domain CLM98_03450 SM00867 YceI-like domain CLM98_03505 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLM98_03515 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_03515 SM00895 CLM98_03515 CLM98_03535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_03535 SM00331 Sigma factor PP2C-like phosphatases CLM98_03575 SM00342 helix_turn_helix, arabinose operon control protein CLM98_03645 SM00267 diguanylate cyclase CLM98_03680 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_03725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CLM98_03725 SM01232 CLM98_03725 CLM98_03750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_03760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_03760 SM00091 PAS domain CLM98_03760 SM00267 diguanylate cyclase CLM98_03765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_03765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_03765 SM01049 CLM98_03765 CLM98_03770 SM00637 CLM98_03770 CLM98_03785 SM00267 diguanylate cyclase CLM98_03820 SM00448 cheY-homologous receiver domain CLM98_03820 SM00850 LytTr DNA-binding domain CLM98_03905 SM00382 ATPases associated with a variety of cellular activities CLM98_03905 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_03935 SM00267 diguanylate cyclase CLM98_03940 SM01263 CLM98_03940 CLM98_03960 SM00564 beta-propeller repeat CLM98_03965 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_03965 SM00248 ankyrin repeats CLM98_03980 SM00829 Enoylreductase CLM98_03990 SM00382 ATPases associated with a variety of cellular activities CLM98_04000 SM00268 Actin CLM98_04025 SM00710 Parallel beta-helix repeats CLM98_04045 SM00936 Penicillin-binding protein 5, C-terminal domain CLM98_04065 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_04070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_04070 SM00245 tail specific protease CLM98_04125 SM01350 CLM98_04125 CLM98_04135 SM00749 bacterial OsmY and nodulation domain CLM98_04140 SM00387 Histidine kinase-like ATPases CLM98_04140 SM00388 His Kinase A (phosphoacceptor) domain CLM98_04145 SM00448 cheY-homologous receiver domain CLM98_04150 SM00387 Histidine kinase-like ATPases CLM98_04150 SM00388 His Kinase A (phosphoacceptor) domain CLM98_04150 SM00448 cheY-homologous receiver domain CLM98_04185 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_04210 SM00382 ATPases associated with a variety of cellular activities CLM98_04280 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_04280 SM00866 CLM98_04280 CLM98_04290 SM00354 helix_turn _helix lactose operon repressor CLM98_04360 SM00849 Metallo-beta-lactamase superfamily CLM98_04365 SM00342 helix_turn_helix, arabinose operon control protein CLM98_04380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_04380 SM00387 Histidine kinase-like ATPases CLM98_04380 SM00388 His Kinase A (phosphoacceptor) domain CLM98_04385 SM00448 cheY-homologous receiver domain CLM98_04385 SM00862 Transcriptional regulatory protein, C terminal CLM98_04405 SM00829 Enoylreductase CLM98_04425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_04445 SM00382 ATPases associated with a variety of cellular activities CLM98_04510 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CLM98_04540 SM00387 Histidine kinase-like ATPases CLM98_04540 SM00388 His Kinase A (phosphoacceptor) domain CLM98_04545 SM00448 cheY-homologous receiver domain CLM98_04545 SM00862 Transcriptional regulatory protein, C terminal CLM98_04660 SM00842 Cell division protein FtsA CLM98_04665 SM00864 Tubulin/FtsZ family, GTPase domain CLM98_04665 SM00865 Tubulin/FtsZ family, C-terminal domain CLM98_04685 SM00957 SecA DEAD-like domain CLM98_04685 SM00958 SecA preprotein cross-linking domain CLM98_04715 SM00829 Enoylreductase CLM98_04720 SM00944 Pro-kumamolisin, activation domain CLM98_04745 SM00642 Alpha-amylase domain CLM98_04785 SM00996 S-adenosyl-L-homocysteine hydrolase CLM98_04785 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLM98_04915 SM00382 ATPases associated with a variety of cellular activities CLM98_04935 SM00382 ATPases associated with a variety of cellular activities CLM98_04945 SM00448 cheY-homologous receiver domain CLM98_04945 SM00862 Transcriptional regulatory protein, C terminal CLM98_04950 SM00387 Histidine kinase-like ATPases CLM98_04950 SM00388 His Kinase A (phosphoacceptor) domain CLM98_05005 SM00382 ATPases associated with a variety of cellular activities CLM98_05015 SM00382 ATPases associated with a variety of cellular activities CLM98_05075 SM00382 ATPases associated with a variety of cellular activities CLM98_05090 SM00650 Ribosomal RNA adenine dimethylases CLM98_05115 SM00108 Bulb-type mannose-specific lectin CLM98_05165 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_05165 SM00895 CLM98_05165 CLM98_05200 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_05280 SM00448 cheY-homologous receiver domain CLM98_05285 SM00387 Histidine kinase-like ATPases CLM98_05285 SM00388 His Kinase A (phosphoacceptor) domain CLM98_05285 SM00448 cheY-homologous receiver domain CLM98_05290 SM00421 helix_turn_helix, Lux Regulon CLM98_05360 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLM98_05360 SM00475 5'-3' exonuclease CLM98_05390 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CLM98_05390 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CLM98_05505 SM00852 Probable molybdopterin binding domain CLM98_05510 SM00028 Tetratricopeptide repeats CLM98_05515 SM00937 CLM98_05515 CLM98_05525 SM00028 Tetratricopeptide repeats CLM98_05545 SM01400 CLM98_05545 CLM98_05595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLM98_05595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLM98_05600 SM00649 Ribosomal protein L11/L12 CLM98_05625 SM00663 RNA polymerase I subunit A N-terminus CLM98_05640 SM00838 Elongation factor G C-terminus CLM98_05640 SM00889 Elongation factor G, domain IV CLM98_05650 SM01403 CLM98_05650 CLM98_05670 SM01382 CLM98_05670 CLM98_05670 SM01383 CLM98_05670 CLM98_05685 SM00322 K homology RNA-binding domain CLM98_05705 SM01374 CLM98_05705 CLM98_05710 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLM98_05770 SM00363 S4 RNA-binding domain CLM98_05770 SM01390 CLM98_05770 CLM98_05775 SM00662 RNA polymerases D CLM98_05825 SM00838 Elongation factor G C-terminus CLM98_05865 SM00829 Enoylreductase CLM98_05915 SM00382 ATPases associated with a variety of cellular activities CLM98_05925 SM00829 Enoylreductase CLM98_05960 SM00855 Phosphoglycerate mutase family CLM98_06010 SM00014 Acid phosphatase homologues CLM98_06030 SM00091 PAS domain CLM98_06030 SM00387 Histidine kinase-like ATPases CLM98_06030 SM00388 His Kinase A (phosphoacceptor) domain CLM98_06035 SM00448 cheY-homologous receiver domain CLM98_06035 SM00862 Transcriptional regulatory protein, C terminal CLM98_06055 SM01329 CLM98_06055 CLM98_06215 SM00382 ATPases associated with a variety of cellular activities CLM98_06215 SM00994 ClpX C4-type zinc finger CLM98_06215 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_06220 SM00382 ATPases associated with a variety of cellular activities CLM98_06220 SM00464 Found in ATP-dependent protease La (LON) CLM98_06225 SM00411 bacterial (prokaryotic) histone like domain CLM98_06250 SM00257 Lysin motif CLM98_06255 SM00849 Metallo-beta-lactamase superfamily CLM98_06270 SM00479 CLM98_06270 CLM98_06275 SM00331 Sigma factor PP2C-like phosphatases CLM98_06275 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLM98_06300 SM00849 Metallo-beta-lactamase superfamily CLM98_06305 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_06370 SM00382 ATPases associated with a variety of cellular activities CLM98_06380 SM00493 CLM98_06380 CLM98_06395 SM00460 Transglutaminase/protease-like homologues CLM98_06405 SM00382 ATPases associated with a variety of cellular activities CLM98_06450 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLM98_06455 SM00822 CLM98_06455 CLM98_06465 SM00825 Beta-ketoacyl synthase CLM98_06500 SM00382 ATPases associated with a variety of cellular activities CLM98_06555 SM01359 CLM98_06555 CLM98_06555 SM01360 CLM98_06555 CLM98_06595 SM00271 DnaJ molecular chaperone homology domain CLM98_06600 SM00448 cheY-homologous receiver domain CLM98_06605 SM00244 prohibitin homologues CLM98_06610 SM00244 prohibitin homologues CLM98_06615 SM01321 CLM98_06615 CLM98_06620 SM00788 Adenylosuccinate synthetase CLM98_06630 SM00822 CLM98_06630 CLM98_06690 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_06710 SM00855 Phosphoglycerate mutase family CLM98_06770 SM00052 Putative diguanylate phosphodiesterase CLM98_06775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_06785 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLM98_06790 SM01092 CO dehydrogenase flavoprotein C-terminal domain CLM98_06805 SM00974 CLM98_06805 CLM98_06825 SM00966 SpoVT / AbrB like domain CLM98_06845 SM00481 DNA polymerase alpha chain like domain CLM98_06860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_06895 SM00091 PAS domain CLM98_06895 SM00342 helix_turn_helix, arabinose operon control protein CLM98_06915 SM01060 CLM98_06915 CLM98_06965 SM00448 cheY-homologous receiver domain CLM98_06965 SM00862 Transcriptional regulatory protein, C terminal CLM98_06970 SM00387 Histidine kinase-like ATPases CLM98_06970 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07010 SM00421 helix_turn_helix, Lux Regulon CLM98_07010 SM00448 cheY-homologous receiver domain CLM98_07025 SM00478 endonuclease III CLM98_07050 SM00244 prohibitin homologues CLM98_07135 SM00904 Riboflavin kinase CLM98_07180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_07185 SM00382 ATPases associated with a variety of cellular activities CLM98_07195 SM00862 Transcriptional regulatory protein, C terminal CLM98_07200 SM00342 helix_turn_helix, arabinose operon control protein CLM98_07240 SM00387 Histidine kinase-like ATPases CLM98_07240 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07245 SM00387 Histidine kinase-like ATPases CLM98_07245 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07245 SM00448 cheY-homologous receiver domain CLM98_07270 SM00387 Histidine kinase-like ATPases CLM98_07270 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07270 SM00448 cheY-homologous receiver domain CLM98_07280 SM00138 Methyltransferase, chemotaxis proteins CLM98_07285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_07285 SM00387 Histidine kinase-like ATPases CLM98_07285 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07285 SM00448 cheY-homologous receiver domain CLM98_07290 SM00091 PAS domain CLM98_07290 SM00387 Histidine kinase-like ATPases CLM98_07290 SM00388 His Kinase A (phosphoacceptor) domain CLM98_07295 SM00448 cheY-homologous receiver domain CLM98_07305 SM00813 Alpha-L-arabinofuranosidase C-terminus CLM98_07320 SM00382 ATPases associated with a variety of cellular activities CLM98_07320 SM00962 SRP54-type protein, GTPase domain CLM98_07320 SM00963 SRP54-type protein, helical bundle domain CLM98_07385 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLM98_07385 SM00534 ATPase domain of DNA mismatch repair MUTS family CLM98_07410 SM00812 Alpha-L-fucosidase CLM98_07435 SM00530 Helix-turn-helix XRE-family like proteins CLM98_07485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_07490 SM00838 Elongation factor G C-terminus CLM98_07505 SM00358 Double-stranded RNA binding motif CLM98_07505 SM00535 Ribonuclease III family CLM98_07520 SM00448 cheY-homologous receiver domain CLM98_07530 SM01118 CLM98_07530 CLM98_07565 SM00357 Cold shock protein domain CLM98_07580 SM00487 DEAD-like helicases superfamily CLM98_07580 SM00490 helicase superfamily c-terminal domain CLM98_07610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_07610 SM00267 diguanylate cyclase CLM98_07635 SM00869 Autotransporter beta-domain CLM98_07640 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLM98_07645 SM00671 Sel1-like repeats. CLM98_07645 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_07850 SM00382 ATPases associated with a variety of cellular activities CLM98_07935 SM00481 DNA polymerase alpha chain like domain CLM98_07975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_08005 SM00267 diguanylate cyclase CLM98_08030 SM00972 Spore Coat Protein U domain CLM98_08045 SM00972 Spore Coat Protein U domain CLM98_08055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_08080 SM01172 CLM98_08080 CLM98_08085 SM00710 Parallel beta-helix repeats CLM98_08085 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CLM98_08120 SM00434 DNA Topoisomerase IV CLM98_08125 SM00342 helix_turn_helix, arabinose operon control protein CLM98_08130 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_08155 SM01217 CLM98_08155 CLM98_08160 SM00631 CLM98_08160 CLM98_08190 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_08215 SM00382 ATPases associated with a variety of cellular activities CLM98_08230 SM00947 Carbonic anhydrase CLM98_08245 SM00357 Cold shock protein domain CLM98_08365 SM00267 diguanylate cyclase CLM98_08375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_08375 SM00267 diguanylate cyclase CLM98_08395 SM00530 Helix-turn-helix XRE-family like proteins CLM98_08410 SM00528 Domain in histone-like proteins of HNS family CLM98_08440 SM00530 Helix-turn-helix XRE-family like proteins CLM98_08545 SM00271 DnaJ molecular chaperone homology domain CLM98_08590 SM00382 ATPases associated with a variety of cellular activities CLM98_08615 SM00861 Transketolase, pyrimidine binding domain CLM98_08625 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_08645 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_08645 SM01091 Transporter associated domain CLM98_08675 SM00382 ATPases associated with a variety of cellular activities CLM98_08680 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_08700 SM00984 UDP binding domain CLM98_08720 SM00354 helix_turn _helix lactose operon repressor CLM98_08740 SM01018 B12 binding domain CLM98_08750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLM98_08780 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_08780 SM00357 Cold shock protein domain CLM98_08780 SM00955 CLM98_08780 CLM98_08790 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLM98_08800 SM00267 diguanylate cyclase CLM98_08805 SM00479 CLM98_08805 CLM98_08820 SM00382 ATPases associated with a variety of cellular activities CLM98_08855 SM00947 Carbonic anhydrase CLM98_08865 SM00478 endonuclease III CLM98_08890 SM00450 Rhodanese Homology Domain CLM98_08900 SM00644 CLM98_08900 CLM98_08920 SM00382 ATPases associated with a variety of cellular activities CLM98_08930 SM00981 CLM98_08930 CLM98_08960 SM00479 CLM98_08960 CLM98_08990 SM00947 Carbonic anhydrase CLM98_09035 SM00421 helix_turn_helix, Lux Regulon CLM98_09035 SM00448 cheY-homologous receiver domain CLM98_09105 SM00968 SMC proteins Flexible Hinge Domain CLM98_09110 SM00771 ZipA, C-terminal domain (FtsZ-binding) CLM98_09125 SM00292 breast cancer carboxy-terminal domain CLM98_09125 SM00532 Ligase N family CLM98_09150 SM00434 DNA Topoisomerase IV CLM98_09195 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_09195 SM00866 CLM98_09195 CLM98_09220 SM00240 Forkhead associated domain CLM98_09240 SM00830 Chorismate mutase type II CLM98_09325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_09325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_09335 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_09345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_09345 SM00091 PAS domain CLM98_09345 SM00387 Histidine kinase-like ATPases CLM98_09345 SM00388 His Kinase A (phosphoacceptor) domain CLM98_09345 SM00448 cheY-homologous receiver domain CLM98_09350 SM00448 cheY-homologous receiver domain CLM98_09360 SM00382 ATPases associated with a variety of cellular activities CLM98_09365 SM00091 PAS domain CLM98_09365 SM00387 Histidine kinase-like ATPases CLM98_09365 SM00388 His Kinase A (phosphoacceptor) domain CLM98_09365 SM00448 cheY-homologous receiver domain CLM98_09525 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_09535 SM00382 ATPases associated with a variety of cellular activities CLM98_09560 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_09560 SM01091 Transporter associated domain CLM98_09590 SM00387 Histidine kinase-like ATPases CLM98_09590 SM00433 TopoisomeraseII CLM98_09615 SM01192 CLM98_09615 CLM98_09615 SM01193 CLM98_09615 CLM98_09640 SM00463 Small MutS-related domain CLM98_09660 SM00257 Lysin motif CLM98_09670 SM01103 CLM98_09670 CLM98_09680 SM00382 ATPases associated with a variety of cellular activities CLM98_09720 SM00382 ATPases associated with a variety of cellular activities CLM98_09735 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLM98_09755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_09755 SM00091 PAS domain CLM98_09755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_09805 SM00670 Large family of predicted nucleotide-binding domains CLM98_09825 SM01130 CLM98_09825 CLM98_09850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_09895 SM00758 CLM98_09895 CLM98_09935 SM00646 CLM98_09935 CLM98_10015 SM00052 Putative diguanylate phosphodiesterase CLM98_10015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_10015 SM00267 diguanylate cyclase CLM98_10030 SM00448 cheY-homologous receiver domain CLM98_10035 SM00387 Histidine kinase-like ATPases CLM98_10050 SM00014 Acid phosphatase homologues CLM98_10140 SM00912 haemagglutination activity domain CLM98_10195 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_10195 SM00419 helix_turn_helix, cAMP Regulatory protein CLM98_10270 SM01007 Class II Aldolase and Adducin N-terminal domain CLM98_10315 SM00841 Elongation factor P, C-terminal CLM98_10315 SM01185 CLM98_10315 CLM98_10320 SM00822 CLM98_10320 CLM98_10340 SM00899 CLM98_10340 CLM98_10375 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLM98_10385 SM00851 MGS-like domain CLM98_10385 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLM98_10440 SM00850 LytTr DNA-binding domain CLM98_10445 SM00937 CLM98_10445 CLM98_10455 SM00448 cheY-homologous receiver domain CLM98_10455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_10460 SM00073 Histidine Phosphotransfer domain CLM98_10460 SM00387 Histidine kinase-like ATPases CLM98_10460 SM00388 His Kinase A (phosphoacceptor) domain CLM98_10460 SM00448 cheY-homologous receiver domain CLM98_10485 SM00966 SpoVT / AbrB like domain CLM98_10505 SM00052 Putative diguanylate phosphodiesterase CLM98_10505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_10505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_10505 SM00091 PAS domain CLM98_10505 SM00267 diguanylate cyclase CLM98_10510 SM00448 cheY-homologous receiver domain CLM98_10520 SM00138 Methyltransferase, chemotaxis proteins CLM98_10525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10535 SM00260 Two component signalling adaptor domain CLM98_10550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10615 SM01049 CLM98_10615 CLM98_10625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_10625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_10630 SM00073 Histidine Phosphotransfer domain CLM98_10630 SM00260 Two component signalling adaptor domain CLM98_10630 SM00387 Histidine kinase-like ATPases CLM98_10630 SM01231 CLM98_10630 CLM98_10635 SM00448 cheY-homologous receiver domain CLM98_10645 SM00260 Two component signalling adaptor domain CLM98_10680 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_10765 SM00530 Helix-turn-helix XRE-family like proteins CLM98_10795 SM00073 Histidine Phosphotransfer domain CLM98_10795 SM00260 Two component signalling adaptor domain CLM98_10795 SM00387 Histidine kinase-like ATPases CLM98_10795 SM01231 CLM98_10795 CLM98_10805 SM00448 cheY-homologous receiver domain CLM98_10820 SM00382 ATPases associated with a variety of cellular activities CLM98_10820 SM00962 SRP54-type protein, GTPase domain CLM98_10835 SM00052 Putative diguanylate phosphodiesterase CLM98_10835 SM00267 diguanylate cyclase CLM98_10840 SM00267 diguanylate cyclase CLM98_10850 SM00267 diguanylate cyclase CLM98_10900 SM00382 ATPases associated with a variety of cellular activities CLM98_10950 SM00822 CLM98_10950 CLM98_10975 SM00382 ATPases associated with a variety of cellular activities CLM98_10980 SM00448 cheY-homologous receiver domain CLM98_10990 SM00421 helix_turn_helix, Lux Regulon CLM98_10990 SM00448 cheY-homologous receiver domain CLM98_11030 SM00047 Lysozyme subfamily 2 CLM98_11075 SM00260 Two component signalling adaptor domain CLM98_11075 SM00448 cheY-homologous receiver domain CLM98_11080 SM00858 CLM98_11080 CLM98_11095 SM00387 Histidine kinase-like ATPases CLM98_11100 SM00052 Putative diguanylate phosphodiesterase CLM98_11100 SM00267 diguanylate cyclase CLM98_11100 SM00448 cheY-homologous receiver domain CLM98_11105 SM00091 PAS domain CLM98_11105 SM00387 Histidine kinase-like ATPases CLM98_11110 SM00052 Putative diguanylate phosphodiesterase CLM98_11110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_11110 SM00091 PAS domain CLM98_11110 SM00267 diguanylate cyclase CLM98_11120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_11145 SM00382 ATPases associated with a variety of cellular activities CLM98_11145 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_11150 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_11170 SM00382 ATPases associated with a variety of cellular activities CLM98_11170 SM00843 CLM98_11170 CLM98_11190 SM00382 ATPases associated with a variety of cellular activities CLM98_11220 SM00562 CLM98_11220 CLM98_11230 SM00028 Tetratricopeptide repeats CLM98_11245 SM00564 beta-propeller repeat CLM98_11250 SM00382 ATPases associated with a variety of cellular activities CLM98_11255 SM00852 Probable molybdopterin binding domain CLM98_11260 SM00450 Rhodanese Homology Domain CLM98_11310 SM00852 Probable molybdopterin binding domain CLM98_11335 SM00529 Helix-turn-helix diphteria tox regulatory element CLM98_11345 SM00479 CLM98_11345 CLM98_11415 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_11415 SM00732 Likely ribonuclease with RNase H fold. CLM98_11420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_11420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_11420 SM00091 PAS domain CLM98_11420 SM00387 Histidine kinase-like ATPases CLM98_11420 SM00388 His Kinase A (phosphoacceptor) domain CLM98_11420 SM00448 cheY-homologous receiver domain CLM98_11425 SM00448 cheY-homologous receiver domain CLM98_11520 SM00382 ATPases associated with a variety of cellular activities CLM98_11575 SM00382 ATPases associated with a variety of cellular activities CLM98_11585 SM00849 Metallo-beta-lactamase superfamily CLM98_11600 SM00382 ATPases associated with a variety of cellular activities CLM98_11615 SM00226 Low molecular weight phosphatase family CLM98_11625 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLM98_11625 SM00465 GIY-YIG type nucleases (URI domain) CLM98_11655 SM00823 Phosphopantetheine attachment site CLM98_11680 SM00984 UDP binding domain CLM98_11700 SM00450 Rhodanese Homology Domain CLM98_11705 SM00421 helix_turn_helix, Lux Regulon CLM98_11705 SM00448 cheY-homologous receiver domain CLM98_11710 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_11715 SM00363 S4 RNA-binding domain CLM98_11755 SM01034 Sensors of blue-light using FAD CLM98_11915 SM00448 cheY-homologous receiver domain CLM98_11915 SM00850 LytTr DNA-binding domain CLM98_11935 SM00869 Autotransporter beta-domain CLM98_11960 SM00387 Histidine kinase-like ATPases CLM98_11960 SM00388 His Kinase A (phosphoacceptor) domain CLM98_11965 SM00421 helix_turn_helix, Lux Regulon CLM98_11965 SM00448 cheY-homologous receiver domain CLM98_11970 SM00869 Autotransporter beta-domain CLM98_11975 SM00052 Putative diguanylate phosphodiesterase CLM98_12055 SM00342 helix_turn_helix, arabinose operon control protein CLM98_12060 SM00387 Histidine kinase-like ATPases CLM98_12065 SM00421 helix_turn_helix, Lux Regulon CLM98_12065 SM00448 cheY-homologous receiver domain CLM98_12070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_12105 SM00530 Helix-turn-helix XRE-family like proteins CLM98_12170 SM00966 SpoVT / AbrB like domain CLM98_12195 SM00965 Secretin and TonB N terminus short domain CLM98_12235 SM00382 ATPases associated with a variety of cellular activities CLM98_12285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLM98_12285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLM98_12285 SM00493 CLM98_12285 CLM98_12395 SM00342 helix_turn_helix, arabinose operon control protein CLM98_12435 SM00487 DEAD-like helicases superfamily CLM98_12690 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_12690 SM01240 CLM98_12690 CLM98_12715 SM00822 CLM98_12715 CLM98_12725 SM00028 Tetratricopeptide repeats CLM98_12735 SM00411 bacterial (prokaryotic) histone like domain CLM98_12740 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_12820 SM00354 helix_turn _helix lactose operon repressor CLM98_12845 SM00363 S4 RNA-binding domain CLM98_12870 SM00382 ATPases associated with a variety of cellular activities CLM98_12920 SM00357 Cold shock protein domain CLM98_12925 SM00382 ATPases associated with a variety of cellular activities CLM98_12930 SM00382 ATPases associated with a variety of cellular activities CLM98_12960 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CLM98_12975 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CLM98_12990 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLM98_13030 SM00840 CLM98_13030 CLM98_13050 SM01234 CLM98_13050 CLM98_13095 SM00849 Metallo-beta-lactamase superfamily CLM98_13120 SM00656 CLM98_13120 CLM98_13160 SM00841 Elongation factor P, C-terminal CLM98_13160 SM01185 CLM98_13160 CLM98_13170 SM00052 Putative diguanylate phosphodiesterase CLM98_13170 SM00267 diguanylate cyclase CLM98_13170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_13210 SM00382 ATPases associated with a variety of cellular activities CLM98_13215 SM00487 DEAD-like helicases superfamily CLM98_13215 SM00490 helicase superfamily c-terminal domain CLM98_13240 SM00357 Cold shock protein domain CLM98_13245 SM01322 CLM98_13245 CLM98_13255 SM00052 Putative diguanylate phosphodiesterase CLM98_13255 SM00267 diguanylate cyclase CLM98_13270 SM00822 CLM98_13270 CLM98_13295 SM00853 MutL C terminal dimerisation domain CLM98_13295 SM01340 CLM98_13295 CLM98_13300 SM00646 CLM98_13300 CLM98_13345 SM00474 3'-5' exonuclease CLM98_13360 SM00528 Domain in histone-like proteins of HNS family CLM98_13440 SM00857 Resolvase, N terminal domain CLM98_13510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_13510 SM00267 diguanylate cyclase CLM98_13515 SM00260 Two component signalling adaptor domain CLM98_13520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_13520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_13530 SM00487 DEAD-like helicases superfamily CLM98_13530 SM00490 helicase superfamily c-terminal domain CLM98_13595 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_13620 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_13620 SM01091 Transporter associated domain CLM98_13650 SM00382 ATPases associated with a variety of cellular activities CLM98_13680 SM01230 CLM98_13680 CLM98_13690 SM01230 CLM98_13690 CLM98_13700 SM00267 diguanylate cyclase CLM98_13700 SM00448 cheY-homologous receiver domain CLM98_13760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_13760 SM00091 PAS domain CLM98_13760 SM00387 Histidine kinase-like ATPases CLM98_13760 SM00388 His Kinase A (phosphoacceptor) domain CLM98_13760 SM00448 cheY-homologous receiver domain CLM98_13760 SM01079 CLM98_13760 CLM98_13765 SM00448 cheY-homologous receiver domain CLM98_13765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_13800 SM00354 helix_turn _helix lactose operon repressor CLM98_13865 SM01323 CLM98_13865 CLM98_13880 SM00344 helix_turn_helix ASNC type CLM98_13950 SM00387 Histidine kinase-like ATPases CLM98_14005 SM00944 Pro-kumamolisin, activation domain CLM98_14060 SM01130 CLM98_14060 CLM98_14085 SM00342 helix_turn_helix, arabinose operon control protein CLM98_14090 SM00382 ATPases associated with a variety of cellular activities CLM98_14090 SM00962 SRP54-type protein, GTPase domain CLM98_14090 SM00963 SRP54-type protein, helical bundle domain CLM98_14100 SM00478 endonuclease III CLM98_14110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_14110 SM00091 PAS domain CLM98_14110 SM00387 Histidine kinase-like ATPases CLM98_14110 SM00388 His Kinase A (phosphoacceptor) domain CLM98_14110 SM00448 cheY-homologous receiver domain CLM98_14125 SM00465 GIY-YIG type nucleases (URI domain) CLM98_14160 SM00507 HNH nucleases CLM98_14165 SM00861 Transketolase, pyrimidine binding domain CLM98_14190 SM00849 Metallo-beta-lactamase superfamily CLM98_14275 SM00422 helix_turn_helix, mercury resistance CLM98_14280 SM00411 bacterial (prokaryotic) histone like domain CLM98_14285 SM00873 B3/4 domain CLM98_14285 SM00874 tRNA synthetase B5 domain CLM98_14285 SM00896 Ferredoxin-fold anticodon binding domain CLM98_14310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLM98_14315 SM00354 helix_turn _helix lactose operon repressor CLM98_14320 SM00642 Alpha-amylase domain CLM98_14350 SM00642 Alpha-amylase domain CLM98_14405 SM00382 ATPases associated with a variety of cellular activities CLM98_14470 SM00487 DEAD-like helicases superfamily CLM98_14470 SM00490 helicase superfamily c-terminal domain CLM98_14740 SM01001 AIR carboxylase CLM98_14760 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_14760 SM00322 K homology RNA-binding domain CLM98_14765 SM01387 CLM98_14765 CLM98_14785 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_14785 SM00322 K homology RNA-binding domain CLM98_14835 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLM98_14840 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLM98_14885 SM00822 CLM98_14885 CLM98_14900 SM00052 Putative diguanylate phosphodiesterase CLM98_14900 SM00267 diguanylate cyclase CLM98_14900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_14970 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLM98_15000 SM00257 Lysin motif CLM98_15040 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_15115 SM01160 CLM98_15115 CLM98_15170 SM00098 Alkaline phosphatase homologues CLM98_15180 SM00977 TilS substrate C-terminal domain CLM98_15195 SM01351 CLM98_15195 CLM98_15230 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_15365 SM00382 ATPases associated with a variety of cellular activities CLM98_15400 SM00448 cheY-homologous receiver domain CLM98_15400 SM00862 Transcriptional regulatory protein, C terminal CLM98_15405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_15405 SM00387 Histidine kinase-like ATPases CLM98_15405 SM00388 His Kinase A (phosphoacceptor) domain CLM98_15440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_15440 SM00267 diguanylate cyclase CLM98_15445 SM00363 S4 RNA-binding domain CLM98_15450 SM00052 Putative diguanylate phosphodiesterase CLM98_15450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_15450 SM00091 PAS domain CLM98_15450 SM00267 diguanylate cyclase CLM98_15455 SM00487 DEAD-like helicases superfamily CLM98_15455 SM00490 helicase superfamily c-terminal domain CLM98_15500 SM00342 helix_turn_helix, arabinose operon control protein CLM98_15500 SM00478 endonuclease III CLM98_15500 SM01009 AlkA N-terminal domain CLM98_15520 SM00829 Enoylreductase CLM98_15595 SM00342 helix_turn_helix, arabinose operon control protein CLM98_15665 SM00645 Papain family cysteine protease CLM98_15670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_15670 SM00387 Histidine kinase-like ATPases CLM98_15670 SM00388 His Kinase A (phosphoacceptor) domain CLM98_15675 SM00448 cheY-homologous receiver domain CLM98_15675 SM00862 Transcriptional regulatory protein, C terminal CLM98_15690 SM00487 DEAD-like helicases superfamily CLM98_15690 SM00490 helicase superfamily c-terminal domain CLM98_15690 SM00982 CLM98_15690 CLM98_15690 SM01058 CarD-like/TRCF domain CLM98_15730 SM00073 Histidine Phosphotransfer domain CLM98_15730 SM00260 Two component signalling adaptor domain CLM98_15730 SM00387 Histidine kinase-like ATPases CLM98_15730 SM01231 CLM98_15730 CLM98_15735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_15735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_15740 SM00260 Two component signalling adaptor domain CLM98_15745 SM00052 Putative diguanylate phosphodiesterase CLM98_15745 SM00448 cheY-homologous receiver domain CLM98_15750 SM00138 Methyltransferase, chemotaxis proteins CLM98_15755 SM00448 cheY-homologous receiver domain CLM98_15760 SM00155 Phospholipase D. Active site motifs. CLM98_15775 SM00855 Phosphoglycerate mutase family CLM98_15835 SM00248 ankyrin repeats CLM98_15875 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLM98_15880 SM01092 CO dehydrogenase flavoprotein C-terminal domain CLM98_15890 SM00829 Enoylreductase CLM98_15895 SM00267 diguanylate cyclase CLM98_15900 SM00487 DEAD-like helicases superfamily CLM98_16000 SM00732 Likely ribonuclease with RNase H fold. CLM98_16050 SM00411 bacterial (prokaryotic) histone like domain CLM98_16080 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CLM98_16095 SM00382 ATPases associated with a variety of cellular activities CLM98_16125 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_16130 SM00671 Sel1-like repeats. CLM98_16160 SM00054 EF-hand, calcium binding motif CLM98_16250 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_16270 SM00382 ATPases associated with a variety of cellular activities CLM98_16320 SM00924 MgtE intracellular N domain CLM98_16360 SM00656 CLM98_16360 CLM98_16380 SM00421 helix_turn_helix, Lux Regulon CLM98_16420 SM00849 Metallo-beta-lactamase superfamily CLM98_16430 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_16455 SM00422 helix_turn_helix, mercury resistance CLM98_16595 SM00342 helix_turn_helix, arabinose operon control protein CLM98_16605 SM00387 Histidine kinase-like ATPases CLM98_16605 SM00388 His Kinase A (phosphoacceptor) domain CLM98_16605 SM00448 cheY-homologous receiver domain CLM98_16610 SM00387 Histidine kinase-like ATPases CLM98_16610 SM00388 His Kinase A (phosphoacceptor) domain CLM98_16610 SM00448 cheY-homologous receiver domain CLM98_16620 SM00387 Histidine kinase-like ATPases CLM98_16620 SM00388 His Kinase A (phosphoacceptor) domain CLM98_16620 SM00448 cheY-homologous receiver domain CLM98_16625 SM00867 YceI-like domain CLM98_16635 SM00867 YceI-like domain CLM98_16695 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_16725 SM00028 Tetratricopeptide repeats CLM98_16825 SM00812 Alpha-L-fucosidase CLM98_16830 SM00636 CLM98_16830 CLM98_16845 SM00758 CLM98_16845 CLM98_16845 SM01217 CLM98_16845 CLM98_16875 SM01149 CLM98_16875 CLM98_16915 SM00369 Leucine-rich repeats, typical (most populated) subfamily CLM98_16950 SM00260 Two component signalling adaptor domain CLM98_16960 SM00073 Histidine Phosphotransfer domain CLM98_16960 SM00260 Two component signalling adaptor domain CLM98_16960 SM00387 Histidine kinase-like ATPases CLM98_16960 SM00448 cheY-homologous receiver domain CLM98_16960 SM01231 CLM98_16960 CLM98_16965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_16970 SM00260 Two component signalling adaptor domain CLM98_16975 SM00448 cheY-homologous receiver domain CLM98_16980 SM00448 cheY-homologous receiver domain CLM98_17005 SM00491 CLM98_17005 CLM98_17040 SM00954 Region found in RelA / SpoT proteins CLM98_17095 SM00382 ATPases associated with a variety of cellular activities CLM98_17095 SM00487 DEAD-like helicases superfamily CLM98_17095 SM00490 helicase superfamily c-terminal domain CLM98_17095 SM00847 Helicase associated domain (HA2) Add an annotation CLM98_17110 SM00341 Helicase and RNase D C-terminal CLM98_17110 SM00487 DEAD-like helicases superfamily CLM98_17110 SM00490 helicase superfamily c-terminal domain CLM98_17110 SM00956 CLM98_17110 CLM98_17120 SM00448 cheY-homologous receiver domain CLM98_17145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_17145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_17160 SM00448 cheY-homologous receiver domain CLM98_17165 SM00091 PAS domain CLM98_17165 SM00911 HWE histidine kinase CLM98_17220 SM00382 ATPases associated with a variety of cellular activities CLM98_17235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLM98_17270 SM00834 Putative regulatory protein CLM98_17320 SM00382 ATPases associated with a variety of cellular activities CLM98_17430 SM00855 Phosphoglycerate mutase family CLM98_17480 SM00382 ATPases associated with a variety of cellular activities CLM98_17480 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_17485 SM00382 ATPases associated with a variety of cellular activities CLM98_17495 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_17570 SM00564 beta-propeller repeat CLM98_17580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_17675 SM01126 CLM98_17675 CLM98_17685 SM00881 CoA binding domain CLM98_17695 SM00387 Histidine kinase-like ATPases CLM98_17695 SM00388 His Kinase A (phosphoacceptor) domain CLM98_17700 SM00382 ATPases associated with a variety of cellular activities CLM98_17700 SM00448 cheY-homologous receiver domain CLM98_17775 SM00387 Histidine kinase-like ATPases CLM98_17775 SM00388 His Kinase A (phosphoacceptor) domain CLM98_17780 SM00448 cheY-homologous receiver domain CLM98_17780 SM00862 Transcriptional regulatory protein, C terminal CLM98_17795 SM00642 Alpha-amylase domain CLM98_17805 SM00528 Domain in histone-like proteins of HNS family CLM98_17815 SM00318 Staphylococcal nuclease homologues CLM98_17890 SM00387 Histidine kinase-like ATPases CLM98_17890 SM00388 His Kinase A (phosphoacceptor) domain CLM98_17895 SM00448 cheY-homologous receiver domain CLM98_17915 SM01034 Sensors of blue-light using FAD CLM98_17925 SM00646 CLM98_17925 CLM98_17965 SM00530 Helix-turn-helix XRE-family like proteins CLM98_17985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_17985 SM00387 Histidine kinase-like ATPases CLM98_18015 SM00255 Toll - interleukin 1 - resistance CLM98_18035 SM00869 Autotransporter beta-domain CLM98_18095 SM00354 helix_turn _helix lactose operon repressor CLM98_18125 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLM98_18250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_18250 SM00387 Histidine kinase-like ATPases CLM98_18285 SM00506 Appr-1"-p processing enzyme CLM98_18340 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLM98_18365 SM00849 Metallo-beta-lactamase superfamily CLM98_18380 SM00382 ATPases associated with a variety of cellular activities CLM98_18440 SM00861 Transketolase, pyrimidine binding domain CLM98_18460 SM00028 Tetratricopeptide repeats CLM98_18460 SM00327 von Willebrand factor (vWF) type A domain CLM98_18465 SM00327 von Willebrand factor (vWF) type A domain CLM98_18480 SM00382 ATPases associated with a variety of cellular activities CLM98_18540 SM00487 DEAD-like helicases superfamily CLM98_18540 SM00490 helicase superfamily c-terminal domain CLM98_18550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_18550 SM00954 Region found in RelA / SpoT proteins CLM98_18555 SM01409 CLM98_18555 CLM98_18560 SM00072 Guanylate kinase homologues. CLM98_18585 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_18610 SM01011 Aminopeptidase P, N-terminal domain CLM98_18685 SM00028 Tetratricopeptide repeats CLM98_18685 SM00382 ATPases associated with a variety of cellular activities CLM98_18685 SM00421 helix_turn_helix, Lux Regulon CLM98_18760 SM00464 Found in ATP-dependent protease La (LON) CLM98_18810 SM00342 helix_turn_helix, arabinose operon control protein CLM98_18815 SM00862 Transcriptional regulatory protein, C terminal CLM98_18835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_18865 SM00917 LeuA allosteric (dimerisation) domain CLM98_18870 SM01329 CLM98_18870 CLM98_18890 SM00267 diguanylate cyclase CLM98_18945 SM00919 Malic enzyme, NAD binding domain CLM98_18945 SM01274 CLM98_18945 CLM98_18965 SM00387 Histidine kinase-like ATPases CLM98_18965 SM00388 His Kinase A (phosphoacceptor) domain CLM98_18965 SM00448 cheY-homologous receiver domain CLM98_19005 SM00421 helix_turn_helix, Lux Regulon CLM98_19005 SM00448 cheY-homologous receiver domain CLM98_19015 SM00387 Histidine kinase-like ATPases CLM98_19015 SM00388 His Kinase A (phosphoacceptor) domain CLM98_19020 SM00448 cheY-homologous receiver domain CLM98_19020 SM00862 Transcriptional regulatory protein, C terminal CLM98_19040 SM00822 CLM98_19040 CLM98_19045 SM00354 helix_turn _helix lactose operon repressor CLM98_19060 SM00642 Alpha-amylase domain CLM98_19070 SM01154 CLM98_19070 CLM98_19115 SM00450 Rhodanese Homology Domain CLM98_19190 SM00028 Tetratricopeptide repeats CLM98_19275 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_19275 SM00866 CLM98_19275 CLM98_19340 SM00382 ATPases associated with a variety of cellular activities CLM98_19370 SM01211 CLM98_19370 CLM98_19455 SM00656 CLM98_19455 CLM98_19485 SM00528 Domain in histone-like proteins of HNS family CLM98_19500 SM00382 ATPases associated with a variety of cellular activities CLM98_19530 SM00882 Coenzyme A transferase CLM98_19535 SM00882 Coenzyme A transferase CLM98_19555 SM00984 UDP binding domain CLM98_19580 SM00893 Electron transfer flavoprotein domain CLM98_19585 SM00893 Electron transfer flavoprotein domain CLM98_19655 SM00382 ATPases associated with a variety of cellular activities CLM98_19670 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_19715 SM00487 DEAD-like helicases superfamily CLM98_19715 SM00490 helicase superfamily c-terminal domain CLM98_19750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_19785 SM00825 Beta-ketoacyl synthase CLM98_19860 SM00382 ATPases associated with a variety of cellular activities CLM98_19885 SM00387 Histidine kinase-like ATPases CLM98_19900 SM00830 Chorismate mutase type II CLM98_19910 SM00382 ATPases associated with a variety of cellular activities CLM98_19980 SM00986 Uracil DNA glycosylase superfamily CLM98_19980 SM00987 UreE urease accessory protein, C-terminal domain CLM98_20015 SM00382 ATPases associated with a variety of cellular activities CLM98_20015 SM00930 CLM98_20015 CLM98_20035 SM00387 Histidine kinase-like ATPases CLM98_20035 SM00388 His Kinase A (phosphoacceptor) domain CLM98_20035 SM00448 cheY-homologous receiver domain CLM98_20085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_20085 SM00091 PAS domain CLM98_20085 SM00387 Histidine kinase-like ATPases CLM98_20085 SM00388 His Kinase A (phosphoacceptor) domain CLM98_20085 SM00448 cheY-homologous receiver domain CLM98_20105 SM01005 Alanine racemase, C-terminal domain CLM98_20115 SM00344 helix_turn_helix ASNC type CLM98_20175 SM00382 ATPases associated with a variety of cellular activities CLM98_20190 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CLM98_20195 SM00986 Uracil DNA glycosylase superfamily CLM98_20195 SM00987 UreE urease accessory protein, C-terminal domain CLM98_20200 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_20270 SM00448 cheY-homologous receiver domain CLM98_20270 SM00850 LytTr DNA-binding domain CLM98_20275 SM00387 Histidine kinase-like ATPases CLM98_20325 SM00091 PAS domain CLM98_20325 SM00138 Methyltransferase, chemotaxis proteins CLM98_20325 SM00911 HWE histidine kinase CLM98_20330 SM00448 cheY-homologous receiver domain CLM98_20340 SM00382 ATPases associated with a variety of cellular activities CLM98_20340 SM00448 cheY-homologous receiver domain CLM98_20400 SM00382 ATPases associated with a variety of cellular activities CLM98_20475 SM00382 ATPases associated with a variety of cellular activities CLM98_20480 SM00631 CLM98_20480 CLM98_20515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_20515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_20520 SM00477 DNA/RNA non-specific endonuclease CLM98_20520 SM00892 DNA/RNA non-specific endonuclease CLM98_20690 SM00257 Lysin motif CLM98_20715 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLM98_20715 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLM98_20715 SM00493 CLM98_20715 CLM98_20770 SM00487 DEAD-like helicases superfamily CLM98_20770 SM00490 helicase superfamily c-terminal domain CLM98_20805 SM00986 Uracil DNA glycosylase superfamily CLM98_20805 SM00987 UreE urease accessory protein, C-terminal domain CLM98_20810 SM00448 cheY-homologous receiver domain CLM98_20820 SM00382 ATPases associated with a variety of cellular activities CLM98_20825 SM00487 DEAD-like helicases superfamily CLM98_20825 SM00490 helicase superfamily c-terminal domain CLM98_20835 SM00357 Cold shock protein domain CLM98_20835 SM00382 ATPases associated with a variety of cellular activities CLM98_20835 SM00959 Rho termination factor, N-terminal domain CLM98_20875 SM00487 DEAD-like helicases superfamily CLM98_20915 SM00257 Lysin motif CLM98_20945 SM01150 CLM98_20945 CLM98_21000 SM00644 CLM98_21000 CLM98_21010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_21045 SM01217 CLM98_21045 CLM98_21050 SM00905 Dihydroneopterin aldolase CLM98_21080 SM00400 zinc finger CLM98_21080 SM00493 CLM98_21080 CLM98_21080 SM00766 DNA primase DnaG DnaB-binding CLM98_21185 SM00363 S4 RNA-binding domain CLM98_21230 SM00470 ParB-like nuclease domain CLM98_21255 SM01259 CLM98_21255 CLM98_21285 SM00836 DALR anticodon binding domain CLM98_21285 SM01016 Arginyl tRNA synthetase N terminal dom CLM98_21315 SM00823 Phosphopantetheine attachment site CLM98_21315 SM00824 Thioesterase CLM98_21355 SM00938 Nitrogen regulatory protein P-II CLM98_21365 SM00382 ATPases associated with a variety of cellular activities CLM98_21380 SM00052 Putative diguanylate phosphodiesterase CLM98_21415 SM00244 prohibitin homologues CLM98_21460 SM00448 cheY-homologous receiver domain CLM98_21460 SM00862 Transcriptional regulatory protein, C terminal CLM98_21465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_21465 SM00387 Histidine kinase-like ATPases CLM98_21465 SM00388 His Kinase A (phosphoacceptor) domain CLM98_21495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_21540 SM01060 CLM98_21540 CLM98_21555 SM00421 helix_turn_helix, Lux Regulon CLM98_21555 SM00448 cheY-homologous receiver domain CLM98_21570 SM00382 ATPases associated with a variety of cellular activities CLM98_21615 SM00849 Metallo-beta-lactamase superfamily CLM98_21645 SM00960 Roadblock/LC7 domain CLM98_21720 SM00387 Histidine kinase-like ATPases CLM98_21720 SM00388 His Kinase A (phosphoacceptor) domain CLM98_21725 SM00448 cheY-homologous receiver domain CLM98_21725 SM00862 Transcriptional regulatory protein, C terminal CLM98_21750 SM00248 ankyrin repeats CLM98_21765 SM00491 CLM98_21765 CLM98_21795 SM00477 DNA/RNA non-specific endonuclease CLM98_21795 SM00892 DNA/RNA non-specific endonuclease CLM98_21815 SM01004 Delta-aminolevulinic acid dehydratase CLM98_21865 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_21885 SM00382 ATPases associated with a variety of cellular activities CLM98_21895 SM00530 Helix-turn-helix XRE-family like proteins CLM98_21935 SM00342 helix_turn_helix, arabinose operon control protein CLM98_21945 SM00382 ATPases associated with a variety of cellular activities CLM98_22025 SM00881 CoA binding domain CLM98_22030 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_22030 SM00924 MgtE intracellular N domain CLM98_22065 SM00248 ankyrin repeats CLM98_22075 SM00825 Beta-ketoacyl synthase CLM98_22105 SM00822 CLM98_22105 CLM98_22145 SM00563 Phosphate acyltransferases CLM98_22215 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLM98_22215 SM00474 3'-5' exonuclease CLM98_22215 SM00475 5'-3' exonuclease CLM98_22215 SM00482 DNA polymerase A domain CLM98_22230 SM00912 haemagglutination activity domain CLM98_22250 SM00331 Sigma factor PP2C-like phosphatases CLM98_22250 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLM98_22275 SM00240 Forkhead associated domain CLM98_22290 SM00028 Tetratricopeptide repeats CLM98_22300 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_22325 SM00965 Secretin and TonB N terminus short domain CLM98_22335 SM00915 Jacalin-like lectin domain CLM98_22365 SM00382 ATPases associated with a variety of cellular activities CLM98_22365 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_22405 SM00342 helix_turn_helix, arabinose operon control protein CLM98_22415 SM01266 CLM98_22415 CLM98_22435 SM00155 Phospholipase D. Active site motifs. CLM98_22575 SM00421 helix_turn_helix, Lux Regulon CLM98_22575 SM00448 cheY-homologous receiver domain CLM98_22635 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_22655 SM00346 helix_turn_helix isocitrate lyase regulation CLM98_22665 SM00091 PAS domain CLM98_22665 SM00387 Histidine kinase-like ATPases CLM98_22665 SM00388 His Kinase A (phosphoacceptor) domain CLM98_22665 SM00448 cheY-homologous receiver domain CLM98_22700 SM00564 beta-propeller repeat CLM98_22750 SM00836 DALR anticodon binding domain CLM98_22760 SM00382 ATPases associated with a variety of cellular activities CLM98_22850 SM00354 helix_turn _helix lactose operon repressor CLM98_22865 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_22875 SM00758 CLM98_22875 CLM98_22875 SM01217 CLM98_22875 CLM98_22905 SM00612 CLM98_22905 CLM98_22935 SM01007 Class II Aldolase and Adducin N-terminal domain CLM98_22965 SM00633 Glycosyl hydrolase family 10 CLM98_22990 SM00633 Glycosyl hydrolase family 10 CLM98_23065 SM00829 Enoylreductase CLM98_23070 SM00563 Phosphate acyltransferases CLM98_23085 SM00354 helix_turn _helix lactose operon repressor CLM98_23105 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLM98_23145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_23145 SM00388 His Kinase A (phosphoacceptor) domain CLM98_23160 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CLM98_23160 SM01232 CLM98_23160 CLM98_23250 SM00530 Helix-turn-helix XRE-family like proteins CLM98_23300 SM00491 CLM98_23300 CLM98_23320 SM00448 cheY-homologous receiver domain CLM98_23365 SM00047 Lysozyme subfamily 2 CLM98_23400 SM00318 Staphylococcal nuclease homologues CLM98_23420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_23435 SM00487 DEAD-like helicases superfamily CLM98_23435 SM00490 helicase superfamily c-terminal domain CLM98_23450 SM00480 DNA polymerase III beta subunit CLM98_23455 SM00470 ParB-like nuclease domain CLM98_23525 SM00487 DEAD-like helicases superfamily CLM98_23550 SM00487 DEAD-like helicases superfamily CLM98_23550 SM00490 helicase superfamily c-terminal domain CLM98_23555 SM00671 Sel1-like repeats. CLM98_23560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_23830 SM00530 Helix-turn-helix XRE-family like proteins CLM98_23885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLM98_23890 SM00226 Low molecular weight phosphatase family CLM98_23940 SM00422 helix_turn_helix, mercury resistance CLM98_24120 SM00248 ankyrin repeats CLM98_24245 SM00470 ParB-like nuclease domain CLM98_24385 SM00470 ParB-like nuclease domain CLM98_24610 SM00857 Resolvase, N terminal domain CLM98_24645 SM00670 Large family of predicted nucleotide-binding domains CLM98_24655 SM00857 Resolvase, N terminal domain CLM98_24830 SM00966 SpoVT / AbrB like domain CLM98_24835 SM00857 Resolvase, N terminal domain CLM98_24880 SM00857 Resolvase, N terminal domain CLM98_24890 SM00670 Large family of predicted nucleotide-binding domains