locus-tag class description J152_00001 PF01527 Transposase J152_00003 PF02796 Helix-turn-helix domain of resolvase J152_00003 PF00239 Resolvase, N terminal domain J152_00016 PF07015 VirC1 protein J152_00020 PF03377 TAL effector repeat J152_00024 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J152_00026 PF00239 Resolvase, N terminal domain J152_00026 PF02796 Helix-turn-helix domain of resolvase J152_00031 PF13700 Domain of unknown function (DUF4158) J152_00031 PF01526 Tn3 transposase DDE domain J152_00032 PF01526 Tn3 transposase DDE domain J152_00032 PF13700 Domain of unknown function (DUF4158) J152_00035 PF02796 Helix-turn-helix domain of resolvase J152_00035 PF00239 Resolvase, N terminal domain J152_00036 PF03377 TAL effector repeat J152_00044 PF13406 Transglycosylase SLT domain J152_00045 PF01526 Tn3 transposase DDE domain J152_00045 PF13700 Domain of unknown function (DUF4158) J152_00050 PF01527 Transposase J152_00051 PF03377 TAL effector repeat J152_00055 PF07015 VirC1 protein J152_00068 PF18272 single-stranded DNA binding TraI N-terminal subdomain J152_00068 PF18340 DNA relaxase TraI 2B/2B-like domain J152_00068 PF08751 TrwC relaxase J152_00068 PF18272 single-stranded DNA binding TraI N-terminal subdomain J152_00068 PF07057 DNA helicase TraI J152_00068 PF18340 DNA relaxase TraI 2B/2B-like domain J152_00068 PF08751 TrwC relaxase J152_00068 PF07057 DNA helicase TraI J152_00073 PF01464 Transglycosylase SLT domain J152_00074 PF00437 Type II/IV secretion system protein J152_00075 PF03743 Bacterial conjugation TrbI-like protein J152_00076 PF03524 Conjugal transfer protein J152_00088 PF01527 Transposase J152_00091 PF06613 KorB C-terminal beta-barrel domain J152_00091 PF02195 ParB-like nuclease domain J152_00091 PF08535 KorB domain J152_00092 PF13614 AAA domain J152_00097 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J152_00098 PF02796 Helix-turn-helix domain of resolvase J152_00098 PF00239 Resolvase, N terminal domain J152_00099 PF13333 Integrase core domain J152_00099 PF00665 Integrase core domain J152_00099 PF13276 HTH-like domain J152_00101 PF03377 TAL effector repeat J152_00102 PF01526 Tn3 transposase DDE domain J152_00102 PF13700 Domain of unknown function (DUF4158) J152_00103 PF01526 Tn3 transposase DDE domain J152_00103 PF13700 Domain of unknown function (DUF4158) J152_00106 PF02796 Helix-turn-helix domain of resolvase J152_00106 PF00239 Resolvase, N terminal domain J152_00107 PF11638 DnaA N-terminal domain J152_00107 PF08299 Bacterial dnaA protein helix-turn-helix J152_00107 PF00308 Bacterial dnaA protein J152_00108 PF00712 DNA polymerase III beta subunit, N-terminal domain J152_00108 PF02768 DNA polymerase III beta subunit, C-terminal domain J152_00108 PF02767 DNA polymerase III beta subunit, central domain J152_00109 PF02463 RecF/RecN/SMC N terminal domain J152_00111 PF00204 DNA gyrase B J152_00111 PF00986 DNA gyrase B subunit, carboxyl terminus J152_00111 PF18053 DNA gyrase B subunit insert domain J152_00111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00111 PF01751 Toprim domain J152_00113 PF01435 Peptidase family M48 J152_00115 PF03544 Gram-negative bacterial TonB protein C-terminal J152_00116 PF01618 MotA/TolQ/ExbB proton channel family J152_00117 PF02472 Biopolymer transport protein ExbD/TolR J152_00118 PF02472 Biopolymer transport protein ExbD/TolR J152_00119 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J152_00121 PF13091 PLD-like domain J152_00121 PF13396 Phospholipase_D-nuclease N-terminal J152_00124 PF04055 Radical SAM superfamily J152_00126 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J152_00129 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J152_00129 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J152_00130 PF13180 PDZ domain J152_00130 PF03572 Peptidase family S41 J152_00131 PF01551 Peptidase family M23 J152_00133 PF04389 Peptidase family M28 J152_00135 PF00150 Cellulase (glycosyl hydrolase family 5) J152_00136 PF00150 Cellulase (glycosyl hydrolase family 5) J152_00137 PF00150 Cellulase (glycosyl hydrolase family 5) J152_00138 PF08240 Alcohol dehydrogenase GroES-like domain J152_00138 PF00107 Zinc-binding dehydrogenase J152_00139 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J152_00139 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_00140 PF04898 Glutamate synthase central domain J152_00140 PF01645 Conserved region in glutamate synthase J152_00140 PF01493 GXGXG motif J152_00140 PF00310 Glutamine amidotransferases class-II J152_00144 PF01804 Penicillin amidase J152_00146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00146 PF03466 LysR substrate binding domain J152_00149 PF02397 Bacterial sugar transferase J152_00150 PF02350 UDP-N-acetylglucosamine 2-epimerase J152_00152 PF03808 Glycosyl transferase WecB/TagA/CpsF family J152_00153 PF00534 Glycosyl transferases group 1 J152_00153 PF13439 Glycosyltransferase Family 4 J152_00157 PF13537 Glutamine amidotransferase domain J152_00157 PF00733 Asparagine synthase J152_00160 PF16363 GDP-mannose 4,6 dehydratase J152_00163 PF00664 ABC transporter transmembrane region J152_00163 PF00005 ABC transporter J152_00165 PF00733 Asparagine synthase J152_00165 PF13537 Glutamine amidotransferase domain J152_00170 PF00685 Sulfotransferase domain J152_00187 PF09369 Domain of unknown function (DUF1998) J152_00187 PF00271 Helicase conserved C-terminal domain J152_00187 PF00270 DEAD/DEAH box helicase J152_00188 PF03006 Haemolysin-III related J152_00191 PF00106 short chain dehydrogenase J152_00193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00193 PF03466 LysR substrate binding domain J152_00197 PF02525 Flavodoxin-like fold J152_00199 PF01527 Transposase J152_00208 PF05532 CsbD-like J152_00212 PF16485 Protealysin propeptide J152_00212 PF02868 Thermolysin metallopeptidase, alpha-helical domain J152_00212 PF01447 Thermolysin metallopeptidase, catalytic domain J152_00214 PF00293 NUDIX domain J152_00214 PF13344 Haloacid dehalogenase-like hydrolase J152_00217 PF00085 Thioredoxin J152_00218 PF00083 Sugar (and other) transporter J152_00218 PF08946 Osmosensory transporter coiled coil J152_00226 PF17863 AAA lid domain J152_00226 PF07726 ATPase family associated with various cellular activities (AAA) J152_00232 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J152_00233 PF00155 Aminotransferase class I and II J152_00234 PF00593 TonB dependent receptor J152_00234 PF07715 TonB-dependent Receptor Plug Domain J152_00236 PF07883 Cupin domain J152_00237 PF00171 Aldehyde dehydrogenase family J152_00241 PF02735 Ku70/Ku80 beta-barrel domain J152_00242 PF01070 FMN-dependent dehydrogenase J152_00243 PF00144 Beta-lactamase J152_00244 PF07730 Histidine kinase J152_00245 PF00196 Bacterial regulatory proteins, luxR family J152_00245 PF00072 Response regulator receiver domain J152_00249 PF18500 CadC C-terminal domain 1 J152_00249 PF00486 Transcriptional regulatory protein, C terminal J152_00250 PF07055 Enoyl reductase FAD binding domain J152_00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region J152_00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J152_00252 PF00294 pfkB family carbohydrate kinase J152_00263 PF01527 Transposase J152_00264 PF13276 HTH-like domain J152_00264 PF13333 Integrase core domain J152_00264 PF00665 Integrase core domain J152_00265 PF00128 Alpha amylase, catalytic domain J152_00265 PF11896 Domain of unknown function (DUF3416) J152_00266 PF16657 Maltogenic Amylase, C-terminal domain J152_00266 PF00128 Alpha amylase, catalytic domain J152_00267 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J152_00267 PF00128 Alpha amylase, catalytic domain J152_00267 PF02806 Alpha amylase, C-terminal all-beta domain J152_00269 PF00248 Aldo/keto reductase family J152_00270 PF00135 Carboxylesterase family J152_00271 PF13472 GDSL-like Lipase/Acylhydrolase family J152_00271 PF07859 alpha/beta hydrolase fold J152_00273 PF03480 Bacterial extracellular solute-binding protein, family 7 J152_00275 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J152_00276 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J152_00276 PF04616 Glycosyl hydrolases family 43 J152_00277 PF00356 Bacterial regulatory proteins, lacI family J152_00278 PF04962 KduI/IolB family J152_00281 PF00657 GDSL-like Lipase/Acylhydrolase J152_00284 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J152_00285 PF01037 Lrp/AsnC ligand binding domain J152_00286 PF07660 Secretin and TonB N terminus short domain J152_00286 PF07715 TonB-dependent Receptor Plug Domain J152_00286 PF00593 TonB dependent receptor J152_00287 PF01734 Patatin-like phospholipase J152_00289 PF00005 ABC transporter J152_00292 PF00005 ABC transporter J152_00293 PF00528 Binding-protein-dependent transport system inner membrane component J152_00295 PF12867 DinB superfamily J152_00295 PF03781 Sulfatase-modifying factor enzyme 1 J152_00298 PF01381 Helix-turn-helix J152_00302 PF10609 NUBPL iron-transfer P-loop NTPase J152_00302 PF01883 Iron-sulfur cluster assembly protein J152_00305 PF13091 PLD-like domain J152_00306 PF03061 Thioesterase superfamily J152_00312 PF00107 Zinc-binding dehydrogenase J152_00312 PF08240 Alcohol dehydrogenase GroES-like domain J152_00314 PF02673 Bacitracin resistance protein BacA J152_00315 PF03951 Glutamine synthetase, beta-Grasp domain J152_00315 PF00120 Glutamine synthetase, catalytic domain J152_00316 PF00543 Nitrogen regulatory protein P-II J152_00317 PF00909 Ammonium Transporter Family J152_00318 PF00512 His Kinase A (phospho-acceptor) domain J152_00318 PF00989 PAS fold J152_00318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00319 PF00158 Sigma-54 interaction domain J152_00319 PF00072 Response regulator receiver domain J152_00319 PF02954 Bacterial regulatory protein, Fis family J152_00320 PF00080 Copper/zinc superoxide dismutase (SODC) J152_00321 PF00080 Copper/zinc superoxide dismutase (SODC) J152_00322 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J152_00324 PF00108 Thiolase, N-terminal domain J152_00324 PF02803 Thiolase, C-terminal domain J152_00331 PF00581 Rhodanese-like domain J152_00332 PF02556 Preprotein translocase subunit SecB J152_00333 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J152_00333 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J152_00335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J152_00335 PF00205 Thiamine pyrophosphate enzyme, central domain J152_00335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J152_00336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00337 PF00072 Response regulator receiver domain J152_00337 PF02954 Bacterial regulatory protein, Fis family J152_00337 PF00158 Sigma-54 interaction domain J152_00340 PF07690 Major Facilitator Superfamily J152_00341 PF00588 SpoU rRNA Methylase family J152_00344 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J152_00344 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J152_00345 PF13784 Fic/DOC family N-terminal J152_00345 PF02661 Fic/DOC family J152_00346 PF00561 alpha/beta hydrolase fold J152_00347 PF03692 Putative zinc- or iron-chelating domain J152_00348 PF00501 AMP-binding enzyme J152_00350 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J152_00352 PF01820 D-ala D-ala ligase N-terminus J152_00352 PF07478 D-ala D-ala ligase C-terminus J152_00354 PF03109 ABC1 family J152_00356 PF00849 RNA pseudouridylate synthase J152_00358 PF00472 RF-1 domain J152_00360 PF01112 Asparaginase J152_00361 PF01432 Peptidase family M3 J152_00362 PF12706 Beta-lactamase superfamily domain J152_00365 PF12833 Helix-turn-helix domain J152_00366 PF00999 Sodium/hydrogen exchanger family J152_00367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00367 PF03466 LysR substrate binding domain J152_00368 PF01274 Malate synthase J152_00369 PF00463 Isocitrate lyase family J152_00370 PF00990 Diguanylate cyclase, GGDEF domain J152_00375 PF00326 Prolyl oligopeptidase family J152_00376 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J152_00376 PF00364 Biotin-requiring enzyme J152_00376 PF00289 Biotin carboxylase, N-terminal domain J152_00376 PF02785 Biotin carboxylase C-terminal domain J152_00377 PF01039 Carboxyl transferase domain J152_00378 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_00378 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_00378 PF02770 Acyl-CoA dehydrogenase, middle domain J152_00389 PF02492 CobW/HypB/UreG, nucleotide-binding domain J152_00389 PF07683 Cobalamin synthesis protein cobW C-terminal domain J152_00393 PF03969 AFG1-like ATPase J152_00394 PF01047 MarR family J152_00395 PF02566 OsmC-like protein J152_00400 PF16884 N-terminal domain of oxidoreductase J152_00400 PF00107 Zinc-binding dehydrogenase J152_00403 PF00849 RNA pseudouridylate synthase J152_00404 PF00593 TonB dependent receptor J152_00406 PF08482 ATP-dependent helicase C-terminal J152_00406 PF04408 Helicase associated domain (HA2) J152_00406 PF00271 Helicase conserved C-terminal domain J152_00406 PF00270 DEAD/DEAH box helicase J152_00407 PF07308 Protein of unknown function (DUF1456) J152_00408 PF00576 HIUase/Transthyretin family J152_00409 PF13454 FAD-NAD(P)-binding J152_00410 PF09349 OHCU decarboxylase J152_00410 PF01014 Uricase J152_00413 PF00266 Aminotransferase class-V J152_00414 PF01546 Peptidase family M20/M25/M40 J152_00414 PF07687 Peptidase dimerisation domain J152_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00415 PF03466 LysR substrate binding domain J152_00416 PF07690 Major Facilitator Superfamily J152_00419 PF01425 Amidase J152_00420 PF01156 Inosine-uridine preferring nucleoside hydrolase J152_00422 PF00860 Permease family J152_00423 PF00111 2Fe-2S iron-sulfur cluster binding domain J152_00424 PF00355 Rieske [2Fe-2S] domain J152_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00425 PF03466 LysR substrate binding domain J152_00426 PF01026 TatD related DNase J152_00429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00429 PF03466 LysR substrate binding domain J152_00430 PF07690 Major Facilitator Superfamily J152_00433 PF02146 Sir2 family J152_00434 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J152_00435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J152_00435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J152_00437 PF00551 Formyl transferase J152_00438 PF00486 Transcriptional regulatory protein, C terminal J152_00438 PF00072 Response regulator receiver domain J152_00439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00439 PF00672 HAMP domain J152_00439 PF00512 His Kinase A (phospho-acceptor) domain J152_00440 PF00529 HlyD membrane-fusion protein of T1SS J152_00440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_00441 PF00873 AcrB/AcrD/AcrF family J152_00442 PF02321 Outer membrane efflux protein J152_00444 PF02219 Methylenetetrahydrofolate reductase J152_00445 PF02677 Epoxyqueuosine reductase QueH J152_00446 PF03466 LysR substrate binding domain J152_00446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00447 PF03358 NADPH-dependent FMN reductase J152_00449 PF01717 Cobalamin-independent synthase, Catalytic domain J152_00449 PF08267 Cobalamin-independent synthase, N-terminal domain J152_00450 PF03812 2-keto-3-deoxygluconate permease J152_00452 PF05368 NmrA-like family J152_00453 PF01638 HxlR-like helix-turn-helix J152_00457 PF13276 HTH-like domain J152_00457 PF00665 Integrase core domain J152_00457 PF13333 Integrase core domain J152_00458 PF01527 Transposase J152_00459 PF00589 Phage integrase family J152_00459 PF13495 Phage integrase, N-terminal SAM-like domain J152_00460 PF00920 Dehydratase family J152_00463 PF00132 Bacterial transferase hexapeptide (six repeats) J152_00464 PF07690 Major Facilitator Superfamily J152_00465 PF11871 Domain of unknown function (DUF3391) J152_00465 PF01966 HD domain J152_00469 PF00171 Aldehyde dehydrogenase family J152_00471 PF01494 FAD binding domain J152_00474 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J152_00474 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J152_00475 PF00230 Major intrinsic protein J152_00476 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J152_00476 PF01266 FAD dependent oxidoreductase J152_00477 PF00455 DeoR C terminal sensor domain J152_00477 PF08220 DeoR-like helix-turn-helix domain J152_00479 PF00355 Rieske [2Fe-2S] domain J152_00480 PF01144 Coenzyme A transferase J152_00481 PF01144 Coenzyme A transferase J152_00482 PF00108 Thiolase, N-terminal domain J152_00482 PF02803 Thiolase, C-terminal domain J152_00483 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J152_00483 PF00775 Dioxygenase J152_00485 PF10397 Adenylosuccinate lyase C-terminus J152_00485 PF00206 Lyase J152_00486 PF12146 Serine aminopeptidase, S33 J152_00487 PF02627 Carboxymuconolactone decarboxylase family J152_00489 PF09339 IclR helix-turn-helix domain J152_00489 PF01614 Bacterial transcriptional regulator J152_00491 PF07859 alpha/beta hydrolase fold J152_00492 PF10677 Protein of unknown function (DUF2490) J152_00493 PF01134 Glucose inhibited division protein A J152_00493 PF13932 GidA associated domain J152_00495 PF00291 Pyridoxal-phosphate dependent enzyme J152_00499 PF13649 Methyltransferase domain J152_00501 PF12697 Alpha/beta hydrolase family J152_00503 PF00155 Aminotransferase class I and II J152_00504 PF04055 Radical SAM superfamily J152_00504 PF06968 Biotin and Thiamin Synthesis associated domain J152_00506 PF01040 UbiA prenyltransferase family J152_00510 PF05819 NolX protein J152_00518 PF01313 Bacterial export proteins, family 3 J152_00519 PF00813 FliP family J152_00522 PF00771 FHIPEP family J152_00523 PF01312 FlhB HrpN YscU SpaS Family J152_00526 PF01514 Secretory protein of YscJ/FliF family J152_00529 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J152_00529 PF02874 ATP synthase alpha/beta family, beta-barrel domain J152_00529 PF18269 T3SS EscN ATPase C-terminal domain J152_00531 PF01311 Bacterial export proteins, family 1 J152_00534 PF01464 Transglycosylase SLT domain J152_00537 PF12794 Mechanosensitive ion channel inner membrane domain 1 J152_00537 PF00924 Mechanosensitive ion channel J152_00537 PF12795 Mechanosensitive ion channel porin domain J152_00538 PF00884 Sulfatase J152_00539 PF03109 ABC1 family J152_00540 PF05661 Protein of unknown function (DUF808) J152_00541 PF00990 Diguanylate cyclase, GGDEF domain J152_00541 PF00072 Response regulator receiver domain J152_00542 PF08323 Starch synthase catalytic domain J152_00542 PF00534 Glycosyl transferases group 1 J152_00543 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J152_00543 PF02806 Alpha amylase, C-terminal all-beta domain J152_00543 PF00128 Alpha amylase, catalytic domain J152_00544 PF11941 Domain of unknown function (DUF3459) J152_00544 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J152_00544 PF00128 Alpha amylase, catalytic domain J152_00545 PF02446 4-alpha-glucanotransferase J152_00546 PF00128 Alpha amylase, catalytic domain J152_00548 PF00128 Alpha amylase, catalytic domain J152_00548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J152_00549 PF13460 NAD(P)H-binding J152_00552 PF06903 VirK protein J152_00553 PF02321 Outer membrane efflux protein J152_00556 PF00873 AcrB/AcrD/AcrF family J152_00559 PF00270 DEAD/DEAH box helicase J152_00559 PF00271 Helicase conserved C-terminal domain J152_00561 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J152_00561 PF02817 e3 binding domain J152_00561 PF00364 Biotin-requiring enzyme J152_00563 PF02780 Transketolase, C-terminal domain J152_00563 PF02779 Transketolase, pyrimidine binding domain J152_00564 PF00676 Dehydrogenase E1 component J152_00566 PF03301 Tryptophan 2,3-dioxygenase J152_00567 PF00854 POT family J152_00569 PF01047 MarR family J152_00570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J152_00571 PF04209 homogentisate 1,2-dioxygenase J152_00574 PF03334 Na+/H+ antiporter subunit J152_00575 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J152_00577 PF00361 Proton-conducting membrane transporter J152_00578 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J152_00579 PF13244 Domain of unknown function (DUF4040) J152_00579 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J152_00579 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J152_00579 PF00361 Proton-conducting membrane transporter J152_00582 PF02868 Thermolysin metallopeptidase, alpha-helical domain J152_00582 PF01447 Thermolysin metallopeptidase, catalytic domain J152_00582 PF01483 Proprotein convertase P-domain J152_00582 PF07504 Fungalysin/Thermolysin Propeptide Motif J152_00583 PF00182 Chitinase class I J152_00587 PF01259 SAICAR synthetase J152_00588 PF05099 Tellurite resistance protein TerB J152_00588 PF00226 DnaJ domain J152_00590 PF00834 Ribulose-phosphate 3 epimerase family J152_00591 PF00583 Acetyltransferase (GNAT) family J152_00592 PF00781 Diacylglycerol kinase catalytic domain J152_00593 PF04715 Anthranilate synthase component I, N terminal region J152_00593 PF00425 chorismate binding enzyme J152_00595 PF00117 Glutamine amidotransferase class-I J152_00597 PF02885 Glycosyl transferase family, helical bundle domain J152_00597 PF00591 Glycosyl transferase family, a/b domain J152_00598 PF00218 Indole-3-glycerol phosphate synthase J152_00600 PF00027 Cyclic nucleotide-binding domain J152_00600 PF00325 Bacterial regulatory proteins, crp family J152_00601 PF02675 S-adenosylmethionine decarboxylase J152_00602 PF00893 Small Multidrug Resistance protein J152_00603 PF03232 Ubiquinone biosynthesis protein COQ7 J152_00604 PF00572 Ribosomal protein L13 J152_00605 PF00380 Ribosomal protein S9/S16 J152_00608 PF00293 NUDIX domain J152_00609 PF00210 Ferritin-like domain J152_00610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J152_00610 PF00512 His Kinase A (phospho-acceptor) domain J152_00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00610 PF00672 HAMP domain J152_00610 PF00072 Response regulator receiver domain J152_00610 PF01627 Hpt domain J152_00611 PF00072 Response regulator receiver domain J152_00611 PF00486 Transcriptional regulatory protein, C terminal J152_00615 PF01521 Iron-sulphur cluster biosynthesis J152_00618 PF00293 NUDIX domain J152_00618 PF09297 NADH pyrophosphatase zinc ribbon domain J152_00618 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J152_00619 PF17113 Regulatory signalling modulator protein AmpE J152_00619 PF03186 CobD/Cbib protein J152_00622 PF07690 Major Facilitator Superfamily J152_00623 PF03466 LysR substrate binding domain J152_00623 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00624 PF07690 Major Facilitator Superfamily J152_00625 PF12805 FUSC-like inner membrane protein yccS J152_00626 PF02844 Phosphoribosylglycinamide synthetase, N domain J152_00626 PF02843 Phosphoribosylglycinamide synthetase, C domain J152_00626 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J152_00628 PF01808 AICARFT/IMPCHase bienzyme J152_00628 PF02142 MGS-like domain J152_00629 PF01066 CDP-alcohol phosphatidyltransferase J152_00630 PF12146 Serine aminopeptidase, S33 J152_00630 PF12147 Putative methyltransferase J152_00631 PF00782 Dual specificity phosphatase, catalytic domain J152_00637 PF02954 Bacterial regulatory protein, Fis family J152_00640 PF01381 Helix-turn-helix J152_00645 PF02785 Biotin carboxylase C-terminal domain J152_00645 PF00289 Biotin carboxylase, N-terminal domain J152_00645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J152_00647 PF00364 Biotin-requiring enzyme J152_00648 PF01220 Dehydroquinase class II J152_00649 PF11412 Disulphide bond corrector protein DsbC J152_00649 PF02683 Cytochrome C biogenesis protein transmembrane region J152_00650 PF03091 CutA1 divalent ion tolerance protein J152_00653 PF01852 START domain J152_00655 PF00106 short chain dehydrogenase J152_00656 PF04231 Endonuclease I J152_00657 PF00166 Chaperonin 10 Kd subunit J152_00658 PF00118 TCP-1/cpn60 chaperonin family J152_00660 PF00593 TonB dependent receptor J152_00660 PF07715 TonB-dependent Receptor Plug Domain J152_00661 PF00793 DAHP synthetase I family J152_00664 PF08450 SMP-30/Gluconolactonase/LRE-like region J152_00666 PF08335 GlnD PII-uridylyltransferase J152_00666 PF03710 Glutamate-ammonia ligase adenylyltransferase J152_00667 PF02592 Putative vitamin uptake transporter J152_00670 PF00881 Nitroreductase family J152_00671 PF04264 YceI-like domain J152_00675 PF16957 Malonate decarboxylase, alpha subunit, transporter J152_00676 PF06857 Malonate decarboxylase delta subunit (MdcD) J152_00677 PF01039 Carboxyl transferase domain J152_00679 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J152_00680 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J152_00682 PF00698 Acyl transferase domain J152_00684 PF07729 FCD domain J152_00684 PF00392 Bacterial regulatory proteins, gntR family J152_00685 PF13419 Haloacid dehalogenase-like hydrolase J152_00691 PF07745 Glycosyl hydrolase family 53 J152_00692 PF00456 Transketolase, thiamine diphosphate binding domain J152_00692 PF17831 Pyruvate dehydrogenase E1 component middle domain J152_00693 PF13276 HTH-like domain J152_00693 PF13333 Integrase core domain J152_00693 PF00665 Integrase core domain J152_00694 PF01527 Transposase J152_00695 PF00106 short chain dehydrogenase J152_00698 PF00106 short chain dehydrogenase J152_00700 PF13409 Glutathione S-transferase, N-terminal domain J152_00705 PF03176 MMPL family J152_00705 PF12823 Domain of unknown function (DUF3817) J152_00706 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J152_00706 PF00326 Prolyl oligopeptidase family J152_00707 PF07759 Protein of unknown function (DUF1615) J152_00708 PF00990 Diguanylate cyclase, GGDEF domain J152_00708 PF05230 MASE2 domain J152_00712 PF00892 EamA-like transporter family J152_00713 PF00497 Bacterial extracellular solute-binding proteins, family 3 J152_00716 PF00324 Amino acid permease J152_00718 PF01544 CorA-like Mg2+ transporter protein J152_00720 PF01204 Trehalase J152_00722 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J152_00722 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J152_00727 PF08448 PAS fold J152_00727 PF00990 Diguanylate cyclase, GGDEF domain J152_00727 PF00563 EAL domain J152_00727 PF08447 PAS fold J152_00728 PF00672 HAMP domain J152_00728 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_00728 PF02203 Tar ligand binding domain homologue J152_00729 PF00150 Cellulase (glycosyl hydrolase family 5) J152_00729 PF00553 Cellulose binding domain J152_00730 PF00916 Sulfate permease family J152_00730 PF01740 STAS domain J152_00731 PF08448 PAS fold J152_00731 PF00990 Diguanylate cyclase, GGDEF domain J152_00734 PF13632 Glycosyl transferase family group 2 J152_00736 PF07694 5TMR of 5TMR-LYT J152_00736 PF06580 Histidine kinase J152_00737 PF04397 LytTr DNA-binding domain J152_00737 PF00072 Response regulator receiver domain J152_00738 PF03900 Porphobilinogen deaminase, C-terminal domain J152_00738 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J152_00743 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J152_00743 PF00326 Prolyl oligopeptidase family J152_00745 PF00155 Aminotransferase class I and II J152_00746 PF00326 Prolyl oligopeptidase family J152_00746 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J152_00747 PF04304 Protein of unknown function (DUF454) J152_00749 PF01678 Diaminopimelate epimerase J152_00751 PF02899 Phage integrase, N-terminal SAM-like domain J152_00751 PF00589 Phage integrase family J152_00752 PF00227 Proteasome subunit J152_00753 PF10431 C-terminal, D2-small domain, of ClpB protein J152_00753 PF07724 AAA domain (Cdc48 subfamily) J152_00753 PF00004 ATPase family associated with various cellular activities (AAA) J152_00755 PF13673 Acetyltransferase (GNAT) domain J152_00756 PF13533 Biotin-lipoyl like J152_00758 PF01209 ubiE/COQ5 methyltransferase family J152_00759 PF03707 Bacterial signalling protein N terminal repeat J152_00759 PF00990 Diguanylate cyclase, GGDEF domain J152_00759 PF00563 EAL domain J152_00760 PF01433 Peptidase family M1 domain J152_00760 PF11838 ERAP1-like C-terminal domain J152_00763 PF13360 PQQ-like domain J152_00764 PF00497 Bacterial extracellular solute-binding proteins, family 3 J152_00767 PF08240 Alcohol dehydrogenase GroES-like domain J152_00767 PF00107 Zinc-binding dehydrogenase J152_00769 PF00158 Sigma-54 interaction domain J152_00769 PF01590 GAF domain J152_00769 PF02954 Bacterial regulatory protein, Fis family J152_00770 PF00294 pfkB family carbohydrate kinase J152_00772 PF04085 rod shape-determining protein MreC J152_00774 PF03717 Penicillin-binding Protein dimerisation domain J152_00774 PF00905 Penicillin binding protein transpeptidase domain J152_00775 PF01098 Cell cycle protein J152_00776 PF00295 Glycosyl hydrolases family 28 J152_00777 PF13406 Transglycosylase SLT domain J152_00778 PF03330 Lytic transglycolase J152_00778 PF05036 Sporulation related domain J152_00779 PF00768 D-alanyl-D-alanine carboxypeptidase J152_00779 PF07943 Penicillin-binding protein 5, C-terminal domain J152_00781 PF04359 Protein of unknown function (DUF493) J152_00782 PF03099 Biotin/lipoate A/B protein ligase family J152_00783 PF04055 Radical SAM superfamily J152_00783 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J152_00784 PF00595 PDZ domain J152_00784 PF17804 Tail specific protease N-terminal domain J152_00784 PF11818 C-terminal domain of tail specific protease (DUF3340) J152_00784 PF03572 Peptidase family S41 J152_00786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_00786 PF03466 LysR substrate binding domain J152_00788 PF00293 NUDIX domain J152_00788 PF01467 Cytidylyltransferase-like J152_00795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J152_00795 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J152_00796 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J152_00796 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J152_00797 PF04972 BON domain J152_00798 PF01590 GAF domain J152_00798 PF08446 PAS fold J152_00798 PF00360 Phytochrome region J152_00798 PF00512 His Kinase A (phospho-acceptor) domain J152_00798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00799 PF00072 Response regulator receiver domain J152_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00800 PF00512 His Kinase A (phospho-acceptor) domain J152_00801 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J152_00810 PF03958 Bacterial type II/III secretion system short domain J152_00810 PF00263 Bacterial type II and III secretion system protein J152_00811 PF00437 Type II/IV secretion system protein J152_00812 PF00482 Type II secretion system (T2SS), protein F J152_00813 PF07963 Prokaryotic N-terminal methylation motif J152_00813 PF08334 Type II secretion system (T2SS), protein G J152_00814 PF12019 Type II transport protein GspH J152_00814 PF07963 Prokaryotic N-terminal methylation motif J152_00816 PF11612 Type II secretion system (T2SS), protein J J152_00816 PF07963 Prokaryotic N-terminal methylation motif J152_00817 PF03934 Type II secretion system (T2SS), protein K J152_00823 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J152_00823 PF00703 Glycosyl hydrolases family 2 J152_00823 PF02837 Glycosyl hydrolases family 2, sugar binding domain J152_00823 PF16355 Domain of unknown function (DUF4982) J152_00823 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J152_00828 PF07690 Major Facilitator Superfamily J152_00829 PF00356 Bacterial regulatory proteins, lacI family J152_00830 PF01380 SIS domain J152_00831 PF01979 Amidohydrolase family J152_00833 PF01966 HD domain J152_00833 PF12627 Probable RNA and SrmB- binding site of polymerase A J152_00833 PF01743 Poly A polymerase head domain J152_00834 PF00732 GMC oxidoreductase J152_00834 PF05199 GMC oxidoreductase J152_00835 PF00171 Aldehyde dehydrogenase family J152_00836 PF02028 BCCT, betaine/carnitine/choline family transporter J152_00838 PF01323 DSBA-like thioredoxin domain J152_00841 PF00034 Cytochrome c J152_00842 PF01926 50S ribosome-binding GTPase J152_00843 PF10996 Beta-Casp domain J152_00843 PF00753 Metallo-beta-lactamase superfamily J152_00843 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J152_00845 PF04107 Glutamate-cysteine ligase family 2(GCS2) J152_00846 PF00512 His Kinase A (phospho-acceptor) domain J152_00846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00846 PF00672 HAMP domain J152_00847 PF00072 Response regulator receiver domain J152_00847 PF00486 Transcriptional regulatory protein, C terminal J152_00850 PF02583 Metal-sensitive transcriptional repressor J152_00851 PF00107 Zinc-binding dehydrogenase J152_00851 PF08240 Alcohol dehydrogenase GroES-like domain J152_00852 PF04828 Glutathione-dependent formaldehyde-activating enzyme J152_00853 PF00756 Putative esterase J152_00854 PF00155 Aminotransferase class I and II J152_00854 PF00392 Bacterial regulatory proteins, gntR family J152_00855 PF02567 Phenazine biosynthesis-like protein J152_00856 PF00892 EamA-like transporter family J152_00858 PF00005 ABC transporter J152_00858 PF12848 ABC transporter J152_00860 PF00464 Serine hydroxymethyltransferase J152_00861 PF03477 ATP cone domain J152_00863 PF01872 RibD C-terminal domain J152_00863 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J152_00866 PF00677 Lumazine binding domain J152_00867 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J152_00867 PF00925 GTP cyclohydrolase II J152_00868 PF00885 6,7-dimethyl-8-ribityllumazine synthase J152_00869 PF01029 NusB family J152_00870 PF00586 AIR synthase related protein, N-terminal domain J152_00870 PF02769 AIR synthase related protein, C-terminal domain J152_00874 PF03814 Potassium-transporting ATPase A subunit J152_00876 PF02669 K+-transporting ATPase, c chain J152_00877 PF00512 His Kinase A (phospho-acceptor) domain J152_00877 PF13493 Domain of unknown function (DUF4118) J152_00877 PF02702 Osmosensitive K+ channel His kinase sensor domain J152_00877 PF13492 GAF domain J152_00877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00878 PF00486 Transcriptional regulatory protein, C terminal J152_00878 PF00072 Response regulator receiver domain J152_00881 PF01565 FAD binding domain J152_00881 PF02913 FAD linked oxidases, C-terminal domain J152_00882 PF04307 LexA-binding, inner membrane-associated putative hydrolase J152_00883 PF02021 Uncharacterised protein family UPF0102 J152_00885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J152_00890 PF02381 MraZ protein, putative antitoxin-like J152_00891 PF01795 MraW methylase family J152_00892 PF04999 Cell division protein FtsL J152_00893 PF00905 Penicillin binding protein transpeptidase domain J152_00893 PF03717 Penicillin-binding Protein dimerisation domain J152_00894 PF01225 Mur ligase family, catalytic domain J152_00894 PF02875 Mur ligase family, glutamate ligase domain J152_00894 PF08245 Mur ligase middle domain J152_00895 PF08245 Mur ligase middle domain J152_00895 PF02875 Mur ligase family, glutamate ligase domain J152_00895 PF01225 Mur ligase family, catalytic domain J152_00896 PF00953 Glycosyl transferase family 4 J152_00897 PF01098 Cell cycle protein J152_00898 PF03033 Glycosyltransferase family 28 N-terminal domain J152_00898 PF04101 Glycosyltransferase family 28 C-terminal domain J152_00899 PF01225 Mur ligase family, catalytic domain J152_00899 PF02875 Mur ligase family, glutamate ligase domain J152_00899 PF08245 Mur ligase middle domain J152_00900 PF07478 D-ala D-ala ligase C-terminus J152_00900 PF01820 D-ala D-ala ligase N-terminus J152_00901 PF03799 Cell division protein FtsQ J152_00901 PF08478 POTRA domain, FtsQ-type J152_00902 PF02491 SHS2 domain inserted in FTSA J152_00903 PF12327 FtsZ family, C-terminal domain J152_00903 PF00091 Tubulin/FtsZ family, GTPase domain J152_00904 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J152_00906 PF08525 Opacity-associated protein A N-terminal motif J152_00906 PF01551 Peptidase family M23 J152_00906 PF01476 LysM domain J152_00907 PF01043 SecA preprotein cross-linking domain J152_00907 PF02810 SEC-C motif J152_00907 PF07517 SecA DEAD-like domain J152_00907 PF07516 SecA Wing and Scaffold domain J152_00908 PF00293 NUDIX domain J152_00910 PF02219 Methylenetetrahydrofolate reductase J152_00913 PF08659 KR domain J152_00913 PF00698 Acyl transferase domain J152_00913 PF08240 Alcohol dehydrogenase GroES-like domain J152_00913 PF00107 Zinc-binding dehydrogenase J152_00913 PF16197 Ketoacyl-synthetase C-terminal extension J152_00913 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_00913 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_00913 PF00550 Phosphopantetheine attachment site J152_00913 PF14765 Polyketide synthase dehydratase J152_00914 PF00082 Subtilase family J152_00914 PF09286 Pro-kumamolisin, activation domain J152_00916 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J152_00917 PF00128 Alpha amylase, catalytic domain J152_00923 PF13649 Methyltransferase domain J152_00924 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J152_00924 PF05221 S-adenosyl-L-homocysteine hydrolase J152_00927 PF00311 Phosphoenolpyruvate carboxylase J152_00932 PF00328 Histidine phosphatase superfamily (branch 2) J152_00933 PF00438 S-adenosylmethionine synthetase, N-terminal domain J152_00933 PF02773 S-adenosylmethionine synthetase, C-terminal domain J152_00933 PF02772 S-adenosylmethionine synthetase, central domain J152_00935 PF13649 Methyltransferase domain J152_00936 PF01207 Dihydrouridine synthase (Dus) J152_00939 PF00294 pfkB family carbohydrate kinase J152_00940 PF07662 Na+ dependent nucleoside transporter C-terminus J152_00940 PF01773 Na+ dependent nucleoside transporter N-terminus J152_00940 PF07670 Nucleoside recognition J152_00941 PF00248 Aldo/keto reductase family J152_00943 PF07715 TonB-dependent Receptor Plug Domain J152_00943 PF00593 TonB dependent receptor J152_00948 PF00528 Binding-protein-dependent transport system inner membrane component J152_00949 PF00005 ABC transporter J152_00951 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J152_00953 PF00005 ABC transporter J152_00954 PF13472 GDSL-like Lipase/Acylhydrolase family J152_00955 PF00072 Response regulator receiver domain J152_00955 PF00486 Transcriptional regulatory protein, C terminal J152_00956 PF08521 Two-component sensor kinase N-terminal J152_00956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_00956 PF00512 His Kinase A (phospho-acceptor) domain J152_00958 PF01219 Prokaryotic diacylglycerol kinase J152_00962 PF01790 Prolipoprotein diacylglyceryl transferase J152_00963 PF00303 Thymidylate synthase J152_00965 PF00186 Dihydrofolate reductase J152_00966 PF00158 Sigma-54 interaction domain J152_00967 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_00967 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J152_00968 PF00005 ABC transporter J152_00969 PF00528 Binding-protein-dependent transport system inner membrane component J152_00971 PF00296 Luciferase-like monooxygenase J152_00972 PF03358 NADPH-dependent FMN reductase J152_00976 PF00296 Luciferase-like monooxygenase J152_00977 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J152_00978 PF00528 Binding-protein-dependent transport system inner membrane component J152_00981 PF00005 ABC transporter J152_00981 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J152_00982 PF00149 Calcineurin-like phosphoesterase J152_00983 PF04379 ApaG domain J152_00984 PF00398 Ribosomal RNA adenine dimethylase J152_00985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J152_00986 PF09312 SurA N-terminal domain J152_00986 PF00639 PPIC-type PPIASE domain J152_00987 PF03968 OstA-like protein J152_00987 PF04453 LPS transport system D J152_00990 PF00850 Histone deacetylase domain J152_00991 PF01923 Cobalamin adenosyltransferase J152_00993 PF01494 FAD binding domain J152_00994 PF01494 FAD binding domain J152_00998 PF00392 Bacterial regulatory proteins, gntR family J152_00998 PF07729 FCD domain J152_00999 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J152_01000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J152_01000 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J152_01001 PF03466 LysR substrate binding domain J152_01001 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01002 PF13193 AMP-binding enzyme C-terminal domain J152_01002 PF00501 AMP-binding enzyme J152_01003 PF00171 Aldehyde dehydrogenase family J152_01004 PF00378 Enoyl-CoA hydratase/isomerase J152_01008 PF08450 SMP-30/Gluconolactonase/LRE-like region J152_01009 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J152_01009 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J152_01010 PF01728 FtsJ-like methyltransferase J152_01010 PF18125 RlmM ferredoxin-like domain J152_01013 PF00892 EamA-like transporter family J152_01014 PF00749 tRNA synthetases class I (E and Q), catalytic domain J152_01014 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J152_01017 PF00072 Response regulator receiver domain J152_01017 PF00990 Diguanylate cyclase, GGDEF domain J152_01018 PF01627 Hpt domain J152_01018 PF00512 His Kinase A (phospho-acceptor) domain J152_01018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01018 PF00672 HAMP domain J152_01018 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J152_01018 PF00072 Response regulator receiver domain J152_01019 PF00196 Bacterial regulatory proteins, luxR family J152_01019 PF00072 Response regulator receiver domain J152_01021 PF01625 Peptide methionine sulfoxide reductase J152_01023 PF00923 Transaldolase/Fructose-6-phosphate aldolase J152_01024 PF14760 Rnk N-terminus J152_01024 PF01272 Transcription elongation factor, GreA/GreB, C-term J152_01025 PF03466 LysR substrate binding domain J152_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01026 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_01026 PF13192 Thioredoxin domain J152_01027 PF10417 C-terminal domain of 1-Cys peroxiredoxin J152_01027 PF00578 AhpC/TSA family J152_01028 PF17827 PrmC N-terminal domain J152_01028 PF05175 Methyltransferase small domain J152_01029 PF00561 alpha/beta hydrolase fold J152_01031 PF00293 NUDIX domain J152_01032 PF01612 3'-5' exonuclease J152_01032 PF00476 DNA polymerase family A J152_01032 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J152_01032 PF01367 5'-3' exonuclease, C-terminal SAM fold J152_01038 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J152_01038 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J152_01038 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J152_01043 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J152_01044 PF02233 NAD(P) transhydrogenase beta subunit J152_01047 PF01063 Amino-transferase class IV J152_01048 PF04151 Bacterial pre-peptidase C-terminal domain J152_01048 PF00082 Subtilase family J152_01049 PF00082 Subtilase family J152_01049 PF04151 Bacterial pre-peptidase C-terminal domain J152_01050 PF04151 Bacterial pre-peptidase C-terminal domain J152_01050 PF00082 Subtilase family J152_01051 PF04073 Aminoacyl-tRNA editing domain J152_01053 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J152_01053 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J152_01056 PF03358 NADPH-dependent FMN reductase J152_01057 PF03631 Virulence factor BrkB J152_01058 PF08534 Redoxin J152_01059 PF00708 Acylphosphatase J152_01061 PF03976 Polyphosphate kinase 2 (PPK2) J152_01062 PF00994 Probable molybdopterin binding domain J152_01064 PF03462 PCRF domain J152_01064 PF00472 RF-1 domain J152_01065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J152_01065 PF01488 Shikimate / quinate 5-dehydrogenase J152_01065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J152_01067 PF03550 Outer membrane lipoprotein LolB J152_01068 PF08544 GHMP kinases C terminal J152_01068 PF00288 GHMP kinases N terminal domain J152_01070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J152_01070 PF14572 Phosphoribosyl synthetase-associated domain J152_01071 PF14693 Ribosomal protein TL5, C-terminal domain J152_01071 PF01386 Ribosomal L25p family J152_01072 PF01195 Peptidyl-tRNA hydrolase J152_01073 PF06071 Protein of unknown function (DUF933) J152_01073 PF01926 50S ribosome-binding GTPase J152_01077 PF03143 Elongation factor Tu C-terminal domain J152_01077 PF00009 Elongation factor Tu GTP binding domain J152_01077 PF03144 Elongation factor Tu domain 2 J152_01078 PF00009 Elongation factor Tu GTP binding domain J152_01078 PF03143 Elongation factor Tu C-terminal domain J152_01078 PF03144 Elongation factor Tu domain 2 J152_01080 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J152_01081 PF00467 KOW motif J152_01081 PF02357 Transcription termination factor nusG J152_01082 PF03946 Ribosomal protein L11, N-terminal domain J152_01082 PF00298 Ribosomal protein L11, RNA binding domain J152_01083 PF00687 Ribosomal protein L1p/L10e family J152_01084 PF00466 Ribosomal protein L10 J152_01085 PF00542 Ribosomal protein L7/L12 C-terminal domain J152_01085 PF16320 Ribosomal protein L7/L12 dimerisation domain J152_01087 PF04563 RNA polymerase beta subunit J152_01087 PF10385 RNA polymerase beta subunit external 1 domain J152_01087 PF04565 RNA polymerase Rpb2, domain 3 J152_01087 PF04561 RNA polymerase Rpb2, domain 2 J152_01087 PF04560 RNA polymerase Rpb2, domain 7 J152_01087 PF00562 RNA polymerase Rpb2, domain 6 J152_01088 PF04998 RNA polymerase Rpb1, domain 5 J152_01088 PF05000 RNA polymerase Rpb1, domain 4 J152_01088 PF04997 RNA polymerase Rpb1, domain 1 J152_01088 PF04983 RNA polymerase Rpb1, domain 3 J152_01088 PF00623 RNA polymerase Rpb1, domain 2 J152_01089 PF00164 Ribosomal protein S12/S23 J152_01090 PF00177 Ribosomal protein S7p/S5e J152_01091 PF14492 Elongation Factor G, domain II J152_01091 PF03764 Elongation factor G, domain IV J152_01091 PF00009 Elongation factor Tu GTP binding domain J152_01091 PF03144 Elongation factor Tu domain 2 J152_01091 PF00679 Elongation factor G C-terminus J152_01092 PF03143 Elongation factor Tu C-terminal domain J152_01092 PF03144 Elongation factor Tu domain 2 J152_01092 PF00009 Elongation factor Tu GTP binding domain J152_01093 PF00338 Ribosomal protein S10p/S20e J152_01094 PF00297 Ribosomal protein L3 J152_01095 PF00573 Ribosomal protein L4/L1 family J152_01096 PF00276 Ribosomal protein L23 J152_01097 PF03947 Ribosomal Proteins L2, C-terminal domain J152_01097 PF00181 Ribosomal Proteins L2, RNA binding domain J152_01098 PF00203 Ribosomal protein S19 J152_01099 PF00237 Ribosomal protein L22p/L17e J152_01100 PF00189 Ribosomal protein S3, C-terminal domain J152_01100 PF07650 KH domain J152_01101 PF00252 Ribosomal protein L16p/L10e J152_01102 PF00831 Ribosomal L29 protein J152_01103 PF00366 Ribosomal protein S17 J152_01104 PF00238 Ribosomal protein L14p/L23e J152_01105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J152_01105 PF00467 KOW motif J152_01106 PF00673 ribosomal L5P family C-terminus J152_01106 PF00281 Ribosomal protein L5 J152_01107 PF00253 Ribosomal protein S14p/S29e J152_01108 PF00410 Ribosomal protein S8 J152_01109 PF00347 Ribosomal protein L6 J152_01110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J152_01111 PF00333 Ribosomal protein S5, N-terminal domain J152_01111 PF03719 Ribosomal protein S5, C-terminal domain J152_01112 PF00327 Ribosomal protein L30p/L7e J152_01113 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J152_01114 PF00344 SecY translocase J152_01115 PF00416 Ribosomal protein S13/S18 J152_01116 PF00411 Ribosomal protein S11 J152_01117 PF01479 S4 domain J152_01117 PF00163 Ribosomal protein S4/S9 N-terminal domain J152_01118 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J152_01118 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J152_01118 PF01000 RNA polymerase Rpb3/RpoA insert domain J152_01119 PF01196 Ribosomal protein L17 J152_01120 PF02600 Disulfide bond formation protein DsbB J152_01122 PF01474 Class-II DAHP synthetase family J152_01124 PF01425 Amidase J152_01127 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J152_01128 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J152_01128 PF00056 lactate/malate dehydrogenase, NAD binding domain J152_01129 PF02798 Glutathione S-transferase, N-terminal domain J152_01129 PF00043 Glutathione S-transferase, C-terminal domain J152_01131 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J152_01131 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_01132 PF08240 Alcohol dehydrogenase GroES-like domain J152_01132 PF00107 Zinc-binding dehydrogenase J152_01133 PF00691 OmpA family J152_01133 PF05736 OprF membrane domain J152_01135 PF00849 RNA pseudouridylate synthase J152_01137 PF00155 Aminotransferase class I and II J152_01139 PF00528 Binding-protein-dependent transport system inner membrane component J152_01140 PF00528 Binding-protein-dependent transport system inner membrane component J152_01141 PF17850 CysA C-terminal regulatory domain J152_01141 PF12857 TOBE-like domain J152_01141 PF00005 ABC transporter J152_01143 PF00107 Zinc-binding dehydrogenase J152_01143 PF08240 Alcohol dehydrogenase GroES-like domain J152_01145 PF04185 Phosphoesterase family J152_01145 PF05506 Domain of unknown function (DUF756) J152_01146 PF10459 Peptidase S46 J152_01147 PF10459 Peptidase S46 J152_01148 PF00300 Histidine phosphatase superfamily (branch 1) J152_01149 PF08245 Mur ligase middle domain J152_01149 PF02875 Mur ligase family, glutamate ligase domain J152_01152 PF00156 Phosphoribosyl transferase domain J152_01153 PF04305 Protein of unknown function (DUF455) J152_01157 PF00149 Calcineurin-like phosphoesterase J152_01159 PF01569 PAP2 superfamily J152_01160 PF00534 Glycosyl transferases group 1 J152_01160 PF13439 Glycosyltransferase Family 4 J152_01161 PF02541 Ppx/GppA phosphatase family J152_01162 PF13090 Polyphosphate kinase C-terminal domain 2 J152_01162 PF13089 Polyphosphate kinase N-terminal domain J152_01162 PF17941 Polyphosphate kinase C-terminal domain 1 J152_01162 PF02503 Polyphosphate kinase middle domain J152_01163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01163 PF11808 Phosphate regulon sensor protein PhoR J152_01163 PF00989 PAS fold J152_01163 PF00512 His Kinase A (phospho-acceptor) domain J152_01164 PF00486 Transcriptional regulatory protein, C terminal J152_01164 PF00072 Response regulator receiver domain J152_01165 PF13181 Tetratricopeptide repeat J152_01165 PF01435 Peptidase family M48 J152_01166 PF00462 Glutaredoxin J152_01168 PF00180 Isocitrate/isopropylmalate dehydrogenase J152_01175 PF01527 Transposase J152_01198 PF01527 Transposase J152_01199 PF13333 Integrase core domain J152_01199 PF00665 Integrase core domain J152_01199 PF13276 HTH-like domain J152_01202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01202 PF00512 His Kinase A (phospho-acceptor) domain J152_01202 PF00989 PAS fold J152_01205 PF05697 Bacterial trigger factor protein (TF) J152_01205 PF05698 Bacterial trigger factor protein (TF) C-terminus J152_01206 PF00574 Clp protease J152_01207 PF10431 C-terminal, D2-small domain, of ClpB protein J152_01207 PF07724 AAA domain (Cdc48 subfamily) J152_01207 PF06689 ClpX C4-type zinc finger J152_01208 PF00004 ATPase family associated with various cellular activities (AAA) J152_01208 PF05362 Lon protease (S16) C-terminal proteolytic domain J152_01208 PF02190 ATP-dependent protease La (LON) substrate-binding domain J152_01209 PF00216 Bacterial DNA-binding protein J152_01215 PF05257 CHAP domain J152_01215 PF01476 LysM domain J152_01216 PF00753 Metallo-beta-lactamase superfamily J152_01216 PF16123 Hydroxyacylglutathione hydrolase C-terminus J152_01218 PF00075 RNase H J152_01219 PF00929 Exonuclease J152_01223 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J152_01225 PF00753 Metallo-beta-lactamase superfamily J152_01225 PF12706 Beta-lactamase superfamily domain J152_01226 PF06463 Molybdenum Cofactor Synthesis C J152_01226 PF04055 Radical SAM superfamily J152_01227 PF01967 MoaC family J152_01228 PF02597 ThiS family J152_01229 PF02391 MoaE protein J152_01232 PF01527 Transposase J152_01239 PF12170 DNA polymerase III tau subunit V interacting with alpha J152_01239 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J152_01239 PF12169 DNA polymerase III subunits gamma and tau domain III J152_01240 PF02575 YbaB/EbfC DNA-binding family J152_01241 PF02132 RecR protein J152_01241 PF13662 Toprim domain J152_01242 PF01230 HIT domain J152_01244 PF11992 Domain of unknown function (DUF3488) J152_01244 PF13559 Domain of unknown function (DUF4129) J152_01244 PF01841 Transglutaminase-like superfamily J152_01246 PF17863 AAA lid domain J152_01246 PF07726 ATPase family associated with various cellular activities (AAA) J152_01250 PF02545 Maf-like protein J152_01251 PF02620 Large ribosomal RNA subunit accumulation protein YceD J152_01252 PF01783 Ribosomal L32p protein family J152_01253 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J152_01253 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J152_01255 PF00698 Acyl transferase domain J152_01257 PF00550 Phosphopantetheine attachment site J152_01258 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_01258 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_01259 PF00425 chorismate binding enzyme J152_01259 PF04715 Anthranilate synthase component I, N terminal region J152_01260 PF02618 YceG-like family J152_01261 PF09115 DNA polymerase III, delta subunit, C terminal J152_01265 PF06506 Propionate catabolism activator J152_01265 PF02954 Bacterial regulatory protein, Fis family J152_01265 PF00158 Sigma-54 interaction domain J152_01267 PF00285 Citrate synthase, C-terminal domain J152_01268 PF00330 Aconitase family (aconitate hydratase) J152_01268 PF00694 Aconitase C-terminal domain J152_01269 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J152_01271 PF04303 PrpF protein J152_01272 PF07715 TonB-dependent Receptor Plug Domain J152_01272 PF00593 TonB dependent receptor J152_01274 PF00207 Alpha-2-macroglobulin family J152_01274 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J152_01274 PF17962 Bacterial macroglobulin domain 6 J152_01274 PF01835 MG2 domain J152_01274 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J152_01274 PF07703 Alpha-2-macroglobulin bait region domain J152_01274 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J152_01274 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J152_01277 PF06832 Penicillin-Binding Protein C-terminus Family J152_01277 PF00912 Transglycosylase J152_01277 PF00905 Penicillin binding protein transpeptidase domain J152_01279 PF08534 Redoxin J152_01281 PF01556 DnaJ C terminal domain J152_01281 PF00226 DnaJ domain J152_01283 PF00072 Response regulator receiver domain J152_01285 PF01145 SPFH domain / Band 7 family J152_01285 PF12221 Bacterial membrane protein N terminal J152_01286 PF01145 SPFH domain / Band 7 family J152_01288 PF00709 Adenylosuccinate synthetase J152_01289 PF11838 ERAP1-like C-terminal domain J152_01289 PF01433 Peptidase family M1 domain J152_01292 PF00440 Bacterial regulatory proteins, tetR family J152_01305 PF13456 Reverse transcriptase-like J152_01305 PF00300 Histidine phosphatase superfamily (branch 1) J152_01306 PF01256 Carbohydrate kinase J152_01308 PF00723 Glycosyl hydrolases family 15 J152_01310 PF17678 Glycosyl hydrolase family 92 N-terminal domain J152_01310 PF07971 Glycosyl hydrolase family 92 J152_01314 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_01318 PF17755 UvrA DNA-binding domain J152_01319 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J152_01319 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J152_01320 PF00941 FAD binding domain in molybdopterin dehydrogenase J152_01320 PF03450 CO dehydrogenase flavoprotein C-terminal domain J152_01321 PF01799 [2Fe-2S] binding domain J152_01321 PF00111 2Fe-2S iron-sulfur cluster binding domain J152_01328 PF01726 LexA DNA binding domain J152_01328 PF00717 Peptidase S24-like J152_01331 PF02811 PHP domain J152_01331 PF07733 Bacterial DNA polymerase III alpha NTPase domain J152_01331 PF14579 Helix-hairpin-helix motif J152_01331 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J152_01332 PF00326 Prolyl oligopeptidase family J152_01334 PF03169 OPT oligopeptide transporter protein J152_01337 PF00326 Prolyl oligopeptidase family J152_01337 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J152_01337 PF07676 WD40-like Beta Propeller Repeat J152_01340 PF12833 Helix-turn-helix domain J152_01340 PF02311 AraC-like ligand binding domain J152_01345 PF06628 Catalase-related immune-responsive J152_01345 PF00199 Catalase J152_01345 PF18011 C-terminal domain found in long catalases J152_01346 PF00248 Aldo/keto reductase family J152_01347 PF00135 Carboxylesterase family J152_01348 PF02347 Glycine cleavage system P-protein J152_01351 PF07690 Major Facilitator Superfamily J152_01354 PF08019 Phosphoethanolamine transferase EptA/EptB J152_01354 PF00884 Sulfatase J152_01357 PF00486 Transcriptional regulatory protein, C terminal J152_01357 PF00072 Response regulator receiver domain J152_01358 PF00512 His Kinase A (phospho-acceptor) domain J152_01358 PF08521 Two-component sensor kinase N-terminal J152_01358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01360 PF03776 Septum formation topological specificity factor MinE J152_01361 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J152_01362 PF05209 Septum formation inhibitor MinC, N-terminal domain J152_01362 PF03775 Septum formation inhibitor MinC, C-terminal domain J152_01364 PF07730 Histidine kinase J152_01365 PF00196 Bacterial regulatory proteins, luxR family J152_01365 PF00072 Response regulator receiver domain J152_01368 PF00730 HhH-GPD superfamily base excision DNA repair protein J152_01373 PF02222 ATP-grasp domain J152_01375 PF04376 Arginine-tRNA-protein transferase, N terminus J152_01375 PF04377 Arginine-tRNA-protein transferase, C terminus J152_01381 PF00378 Enoyl-CoA hydratase/isomerase J152_01384 PF17755 UvrA DNA-binding domain J152_01384 PF17760 UvrA interaction domain J152_01384 PF00005 ABC transporter J152_01385 PF00829 Ribosomal prokaryotic L21 protein J152_01386 PF01016 Ribosomal L27 protein J152_01387 PF01926 50S ribosome-binding GTPase J152_01387 PF01018 GTP1/OBG J152_01388 PF01649 Ribosomal protein S20 J152_01389 PF03023 Lipid II flippase MurJ J152_01390 PF01687 Riboflavin kinase J152_01390 PF06574 FAD synthetase J152_01391 PF08264 Anticodon-binding domain of tRNA J152_01391 PF00133 tRNA synthetases class I (I, L, M and V) J152_01391 PF06827 Zinc finger found in FPG and IleRS J152_01392 PF01252 Signal peptidase (SPase) II J152_01393 PF02401 LytB protein J152_01395 PF06481 COX Aromatic Rich Motif J152_01395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J152_01396 PF00115 Cytochrome C and Quinol oxidase polypeptide I J152_01397 PF00510 Cytochrome c oxidase subunit III J152_01398 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J152_01400 PF18073 Rubredoxin metal binding domain J152_01401 PF05656 Protein of unknown function (DUF805) J152_01403 PF12833 Helix-turn-helix domain J152_01404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01404 PF00183 Hsp90 protein J152_01406 PF01740 STAS domain J152_01406 PF08678 Rsbr N terminal J152_01407 PF01740 STAS domain J152_01408 PF13581 Histidine kinase-like ATPase domain J152_01410 PF00512 His Kinase A (phospho-acceptor) domain J152_01410 PF00072 Response regulator receiver domain J152_01410 PF01627 Hpt domain J152_01410 PF17149 Periplasmic sensor domain found in signal transduction proteins J152_01410 PF00672 HAMP domain J152_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01411 PF00512 His Kinase A (phospho-acceptor) domain J152_01411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01411 PF13188 PAS domain J152_01411 PF00072 Response regulator receiver domain J152_01411 PF08448 PAS fold J152_01412 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J152_01412 PF04616 Glycosyl hydrolases family 43 J152_01413 PF07715 TonB-dependent Receptor Plug Domain J152_01413 PF00593 TonB dependent receptor J152_01414 PF00085 Thioredoxin J152_01415 PF07237 Protein of unknown function (DUF1428) J152_01416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01416 PF13492 GAF domain J152_01416 PF00512 His Kinase A (phospho-acceptor) domain J152_01416 PF02702 Osmosensitive K+ channel His kinase sensor domain J152_01416 PF13493 Domain of unknown function (DUF4118) J152_01417 PF01339 CheB methylesterase J152_01418 PF03705 CheR methyltransferase, all-alpha domain J152_01418 PF01739 CheR methyltransferase, SAM binding domain J152_01419 PF00672 HAMP domain J152_01419 PF01627 Hpt domain J152_01419 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J152_01419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01419 PF00072 Response regulator receiver domain J152_01419 PF00512 His Kinase A (phospho-acceptor) domain J152_01420 PF13426 PAS domain J152_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01420 PF00072 Response regulator receiver domain J152_01421 PF00072 Response regulator receiver domain J152_01422 PF00722 Glycosyl hydrolases family 16 J152_01423 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J152_01424 PF01263 Aldose 1-epimerase J152_01425 PF01578 Cytochrome C assembly protein J152_01426 PF00448 SRP54-type protein, GTPase domain J152_01426 PF02978 Signal peptide binding domain J152_01426 PF02881 SRP54-type protein, helical bundle domain J152_01427 PF03060 Nitronate monooxygenase J152_01428 PF01063 Amino-transferase class IV J152_01429 PF00886 Ribosomal protein S16 J152_01430 PF05239 PRC-barrel domain J152_01430 PF01782 RimM N-terminal domain J152_01431 PF01746 tRNA (Guanine-1)-methyltransferase J152_01432 PF01245 Ribosomal protein L19 J152_01433 PF01554 MatE J152_01434 PF01554 MatE J152_01437 PF01479 S4 domain J152_01438 PF00141 Peroxidase J152_01440 PF05190 MutS family domain IV J152_01440 PF00488 MutS domain V J152_01440 PF05192 MutS domain III J152_01440 PF05188 MutS domain II J152_01440 PF01624 MutS domain I J152_01443 PF03527 RHS protein J152_01443 PF05593 RHS Repeat J152_01447 PF16355 Domain of unknown function (DUF4982) J152_01447 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J152_01447 PF00703 Glycosyl hydrolases family 2 J152_01447 PF02837 Glycosyl hydrolases family 2, sugar binding domain J152_01447 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J152_01448 PF07745 Glycosyl hydrolase family 53 J152_01450 PF01381 Helix-turn-helix J152_01450 PF09856 Predicted transcriptional regulator (DUF2083) J152_01450 PF06114 IrrE N-terminal-like domain J152_01451 PF00171 Aldehyde dehydrogenase family J152_01452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_01452 PF02770 Acyl-CoA dehydrogenase, middle domain J152_01452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_01453 PF00378 Enoyl-CoA hydratase/isomerase J152_01454 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J152_01454 PF00378 Enoyl-CoA hydratase/isomerase J152_01454 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J152_01455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J152_01455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J152_01456 PF01545 Cation efflux family J152_01457 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J152_01457 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J152_01457 PF00378 Enoyl-CoA hydratase/isomerase J152_01458 PF04542 Sigma-70 region 2 J152_01458 PF08281 Sigma-70, region 4 J152_01460 PF13180 PDZ domain J152_01461 PF00679 Elongation factor G C-terminus J152_01461 PF03144 Elongation factor Tu domain 2 J152_01461 PF06421 GTP-binding protein LepA C-terminus J152_01461 PF00009 Elongation factor Tu GTP binding domain J152_01462 PF10502 Signal peptidase, peptidase S26 J152_01464 PF14622 Ribonuclease-III-like J152_01464 PF00035 Double-stranded RNA binding motif J152_01465 PF07650 KH domain J152_01465 PF01926 50S ribosome-binding GTPase J152_01466 PF11967 Recombination protein O N terminal J152_01466 PF02565 Recombination protein O C terminal J152_01468 PF05958 tRNA (Uracil-5-)-methyltransferase J152_01470 PF01323 DSBA-like thioredoxin domain J152_01471 PF01593 Flavin containing amine oxidoreductase J152_01472 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J152_01473 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_01475 PF01048 Phosphorylase superfamily J152_01476 PF00313 'Cold-shock' DNA-binding domain J152_01477 PF01494 FAD binding domain J152_01479 PF00270 DEAD/DEAH box helicase J152_01479 PF08494 DEAD/H associated J152_01479 PF00271 Helicase conserved C-terminal domain J152_01480 PF04675 DNA ligase N terminus J152_01480 PF01068 ATP dependent DNA ligase domain J152_01480 PF04679 ATP dependent DNA ligase C terminal region J152_01482 PF04679 ATP dependent DNA ligase C terminal region J152_01482 PF01068 ATP dependent DNA ligase domain J152_01482 PF04675 DNA ligase N terminus J152_01485 PF00990 Diguanylate cyclase, GGDEF domain J152_01485 PF00072 Response regulator receiver domain J152_01488 PF02803 Thiolase, C-terminal domain J152_01488 PF00108 Thiolase, N-terminal domain J152_01489 PF00082 Subtilase family J152_01489 PF03797 Autotransporter beta-domain J152_01489 PF12951 Passenger-associated-transport-repeat J152_01490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J152_01490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J152_01492 PF01863 Protein of unknown function DUF45 J152_01493 PF07043 Protein of unknown function (DUF1328) J152_01495 PF01258 Prokaryotic dksA/traR C4-type zinc finger J152_01499 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J152_01501 PF03831 PhnA domain J152_01501 PF08274 PhnA Zinc-Ribbon J152_01502 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J152_01503 PF07690 Major Facilitator Superfamily J152_01510 PF03706 Lysylphosphatidylglycerol synthase TM region J152_01510 PF09924 Uncharacterised conserved protein (DUF2156) J152_01513 PF01042 Endoribonuclease L-PSP J152_01522 PF04545 Sigma-70, region 4 J152_01522 PF04542 Sigma-70 region 2 J152_01525 PF04060 Putative Fe-S cluster J152_01527 PF09334 tRNA synthetases class I (M) J152_01527 PF01588 Putative tRNA binding domain J152_01530 PF13732 Domain of unknown function (DUF4162) J152_01530 PF00005 ABC transporter J152_01531 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J152_01532 PF00324 Amino acid permease J152_01533 PF02574 Homocysteine S-methyltransferase J152_01535 PF02592 Putative vitamin uptake transporter J152_01539 PF03551 Transcriptional regulator PadR-like family J152_01546 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J152_01547 PF01336 OB-fold nucleic acid binding domain J152_01547 PF02811 PHP domain J152_01547 PF07733 Bacterial DNA polymerase III alpha NTPase domain J152_01547 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J152_01547 PF14579 Helix-hairpin-helix motif J152_01548 PF01351 Ribonuclease HII J152_01549 PF02684 Lipid-A-disaccharide synthetase J152_01550 PF00132 Bacterial transferase hexapeptide (six repeats) J152_01550 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J152_01551 PF07977 FabA-like domain J152_01552 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J152_01552 PF00132 Bacterial transferase hexapeptide (six repeats) J152_01554 PF07244 Surface antigen variable number repeat J152_01554 PF01103 Surface antigen J152_01555 PF02163 Peptidase family M50 J152_01555 PF17820 PDZ domain J152_01556 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J152_01556 PF13288 DXP reductoisomerase C-terminal domain J152_01556 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J152_01558 PF01255 Putative undecaprenyl diphosphate synthase J152_01559 PF01765 Ribosome recycling factor J152_01560 PF00696 Amino acid kinase family J152_01561 PF00072 Response regulator receiver domain J152_01561 PF00990 Diguanylate cyclase, GGDEF domain J152_01562 PF00889 Elongation factor TS J152_01563 PF00318 Ribosomal protein S2 J152_01570 PF00557 Metallopeptidase family M24 J152_01571 PF01909 Nucleotidyltransferase domain J152_01571 PF08335 GlnD PII-uridylyltransferase J152_01571 PF01966 HD domain J152_01572 PF00132 Bacterial transferase hexapeptide (six repeats) J152_01572 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J152_01572 PF14602 Hexapeptide repeat of succinyl-transferase J152_01573 PF03960 ArsC family J152_01574 PF01546 Peptidase family M20/M25/M40 J152_01574 PF07687 Peptidase dimerisation domain J152_01575 PF00733 Asparagine synthase J152_01575 PF13537 Glutamine amidotransferase domain J152_01577 PF00593 TonB dependent receptor J152_01577 PF07715 TonB-dependent Receptor Plug Domain J152_01579 PF01804 Penicillin amidase J152_01580 PF00210 Ferritin-like domain J152_01581 PF05724 Thiopurine S-methyltransferase (TPMT) J152_01583 PF03989 DNA gyrase C-terminal domain, beta-propeller J152_01583 PF00521 DNA gyrase/topoisomerase IV, subunit A J152_01586 PF02321 Outer membrane efflux protein J152_01587 PF00529 HlyD membrane-fusion protein of T1SS J152_01587 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_01588 PF07690 Major Facilitator Superfamily J152_01590 PF01915 Glycosyl hydrolase family 3 C-terminal domain J152_01590 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_01590 PF14310 Fibronectin type III-like domain J152_01592 PF00854 POT family J152_01597 PF12802 MarR family J152_01598 PF01432 Peptidase family M3 J152_01599 PF00255 Glutathione peroxidase J152_01600 PF00970 Oxidoreductase FAD-binding domain J152_01600 PF00175 Oxidoreductase NAD-binding domain J152_01601 PF00005 ABC transporter J152_01602 PF05683 Fumarase C-terminus J152_01602 PF05681 Fumarate hydratase (Fumerase) J152_01604 PF00484 Carbonic anhydrase J152_01605 PF02253 Phospholipase A1 J152_01607 PF00313 'Cold-shock' DNA-binding domain J152_01610 PF00899 ThiF family J152_01611 PF01026 TatD related DNase J152_01614 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_01614 PF02770 Acyl-CoA dehydrogenase, middle domain J152_01614 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_01616 PF02798 Glutathione S-transferase, N-terminal domain J152_01616 PF00043 Glutathione S-transferase, C-terminal domain J152_01617 PF13537 Glutamine amidotransferase domain J152_01617 PF00733 Asparagine synthase J152_01618 PF03358 NADPH-dependent FMN reductase J152_01619 PF00772 DnaB-like helicase N terminal domain J152_01619 PF03796 DnaB-like helicase C terminal domain J152_01620 PF03441 FAD binding domain of DNA photolyase J152_01620 PF00875 DNA photolyase J152_01621 PF05736 OprF membrane domain J152_01621 PF00691 OmpA family J152_01623 PF03466 LysR substrate binding domain J152_01623 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01626 PF00529 HlyD membrane-fusion protein of T1SS J152_01626 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_01627 PF00873 AcrB/AcrD/AcrF family J152_01628 PF00106 short chain dehydrogenase J152_01629 PF02321 Outer membrane efflux protein J152_01630 PF00990 Diguanylate cyclase, GGDEF domain J152_01630 PF08448 PAS fold J152_01632 PF00990 Diguanylate cyclase, GGDEF domain J152_01649 PF01527 Transposase J152_01658 PF00082 Subtilase family J152_01659 PF01668 SmpB protein J152_01660 PF03364 Polyketide cyclase / dehydrase and lipid transport J152_01661 PF03658 RnfH family Ubiquitin J152_01662 PF04355 SmpA / OmlA family J152_01663 PF01475 Ferric uptake regulator family J152_01664 PF02463 RecF/RecN/SMC N terminal domain J152_01665 PF01628 HrcA protein C terminal domain J152_01665 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J152_01666 PF01025 GrpE J152_01667 PF00012 Hsp70 protein J152_01668 PF00226 DnaJ domain J152_01668 PF01556 DnaJ C terminal domain J152_01668 PF00684 DnaJ central domain J152_01670 PF08543 Phosphomethylpyrimidine kinase J152_01676 PF03412 Peptidase C39 family J152_01676 PF00664 ABC transporter transmembrane region J152_01676 PF00005 ABC transporter J152_01677 PF03466 LysR substrate binding domain J152_01677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01678 PF00005 ABC transporter J152_01678 PF00664 ABC transporter transmembrane region J152_01679 PF01205 Uncharacterized protein family UPF0029 J152_01680 PF03641 Possible lysine decarboxylase J152_01681 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J152_01681 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_01682 PF00364 Biotin-requiring enzyme J152_01682 PF02817 e3 binding domain J152_01682 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J152_01683 PF16078 2-oxoglutarate dehydrogenase N-terminus J152_01683 PF00676 Dehydrogenase E1 component J152_01683 PF16870 2-oxoglutarate dehydrogenase C-terminal J152_01683 PF02779 Transketolase, pyrimidine binding domain J152_01685 PF08007 Cupin superfamily protein J152_01687 PF00206 Lyase J152_01687 PF08328 Adenylosuccinate lyase C-terminal J152_01689 PF00571 CBS domain J152_01689 PF03471 Transporter associated domain J152_01689 PF01595 Cyclin M transmembrane N-terminal domain J152_01690 PF10415 Fumarase C C-terminus J152_01690 PF00206 Lyase J152_01695 PF00005 ABC transporter J152_01696 PF00392 Bacterial regulatory proteins, gntR family J152_01698 PF00255 Glutathione peroxidase J152_01699 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J152_01699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J152_01700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J152_01700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J152_01700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J152_01701 PF04102 SlyX J152_01704 PF00356 Bacterial regulatory proteins, lacI family J152_01705 PF07690 Major Facilitator Superfamily J152_01706 PF00294 pfkB family carbohydrate kinase J152_01708 PF02574 Homocysteine S-methyltransferase J152_01708 PF00809 Pterin binding enzyme J152_01708 PF02965 Vitamin B12 dependent methionine synthase, activation domain J152_01708 PF02310 B12 binding domain J152_01708 PF02607 B12 binding domain J152_01709 PF00809 Pterin binding enzyme J152_01709 PF02574 Homocysteine S-methyltransferase J152_01710 PF01209 ubiE/COQ5 methyltransferase family J152_01711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_01711 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_01711 PF02770 Acyl-CoA dehydrogenase, middle domain J152_01714 PF00773 RNB domain J152_01714 PF17876 Cold shock domain J152_01714 PF08461 Ribonuclease R winged-helix domain J152_01714 PF08206 Ribonuclease B OB domain J152_01714 PF00575 S1 RNA binding domain J152_01716 PF08032 RNA 2'-O ribose methyltransferase substrate binding J152_01716 PF00588 SpoU rRNA Methylase family J152_01717 PF00990 Diguanylate cyclase, GGDEF domain J152_01717 PF07694 5TMR of 5TMR-LYT J152_01718 PF00929 Exonuclease J152_01720 PF01895 PhoU domain J152_01721 PF00005 ABC transporter J152_01722 PF00528 Binding-protein-dependent transport system inner membrane component J152_01723 PF00528 Binding-protein-dependent transport system inner membrane component J152_01724 PF12849 PBP superfamily domain J152_01725 PF12849 PBP superfamily domain J152_01728 PF00484 Carbonic anhydrase J152_01729 PF01740 STAS domain J152_01729 PF00916 Sulfate permease family J152_01730 PF10576 Iron-sulfur binding domain of endonuclease III J152_01730 PF00633 Helix-hairpin-helix motif J152_01730 PF00730 HhH-GPD superfamily base excision DNA repair protein J152_01732 PF00378 Enoyl-CoA hydratase/isomerase J152_01733 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J152_01733 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J152_01734 PF00293 NUDIX domain J152_01735 PF00581 Rhodanese-like domain J152_01742 PF10672 S-adenosylmethionine-dependent methyltransferase J152_01742 PF01170 Putative RNA methylase family UPF0020 J152_01742 PF02926 THUMP domain J152_01743 PF01513 ATP-NAD kinase J152_01747 PF00929 Exonuclease J152_01747 PF08411 Exonuclease C-terminal J152_01748 PF01494 FAD binding domain J152_01749 PF00266 Aminotransferase class-V J152_01751 PF06052 3-hydroxyanthranilic acid dioxygenase J152_01752 PF00484 Carbonic anhydrase J152_01761 PF00072 Response regulator receiver domain J152_01761 PF00196 Bacterial regulatory proteins, luxR family J152_01764 PF04299 Putative FMN-binding domain J152_01768 PF00152 tRNA synthetases class II (D, K and N) J152_01768 PF01336 OB-fold nucleic acid binding domain J152_01769 PF01521 Iron-sulphur cluster biosynthesis J152_01770 PF01250 Ribosomal protein S6 J152_01771 PF01084 Ribosomal protein S18 J152_01772 PF01281 Ribosomal protein L9, N-terminal domain J152_01772 PF03948 Ribosomal protein L9, C-terminal domain J152_01773 PF02463 RecF/RecN/SMC N terminal domain J152_01774 PF04354 ZipA, C-terminal FtsZ-binding domain J152_01776 PF00155 Aminotransferase class I and II J152_01777 PF00533 BRCA1 C Terminus (BRCT) domain J152_01777 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J152_01777 PF12826 Helix-hairpin-helix motif J152_01777 PF03120 NAD-dependent DNA ligase OB-fold domain J152_01777 PF01653 NAD-dependent DNA ligase adenylation domain J152_01778 PF00152 tRNA synthetases class II (D, K and N) J152_01780 PF01008 Initiation factor 2 subunit family J152_01781 PF00521 DNA gyrase/topoisomerase IV, subunit A J152_01781 PF03989 DNA gyrase C-terminal domain, beta-propeller J152_01782 PF13360 PQQ-like domain J152_01784 PF01175 Urocanase Rossmann-like domain J152_01784 PF17391 Urocanase N-terminal domain J152_01784 PF17392 Urocanase C-terminal domain J152_01786 PF00221 Aromatic amino acid lyase J152_01787 PF07969 Amidohydrolase family J152_01789 PF00392 Bacterial regulatory proteins, gntR family J152_01789 PF07702 UTRA domain J152_01795 PF01794 Ferric reductase like transmembrane component J152_01796 PF00174 Oxidoreductase molybdopterin binding domain J152_01797 PF00266 Aminotransferase class-V J152_01798 PF01817 Chorismate mutase type II J152_01798 PF01842 ACT domain J152_01798 PF00800 Prephenate dehydratase J152_01799 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J152_01801 PF03544 Gram-negative bacterial TonB protein C-terminal J152_01802 PF02403 Seryl-tRNA synthetase N-terminal domain J152_01802 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J152_01803 PF02525 Flavodoxin-like fold J152_01804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01804 PF03466 LysR substrate binding domain J152_01809 PF01527 Transposase J152_01810 PF13333 Integrase core domain J152_01810 PF13276 HTH-like domain J152_01810 PF00665 Integrase core domain J152_01815 PF02203 Tar ligand binding domain homologue J152_01815 PF00672 HAMP domain J152_01815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_01818 PF00512 His Kinase A (phospho-acceptor) domain J152_01818 PF08448 PAS fold J152_01818 PF13188 PAS domain J152_01818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01818 PF00072 Response regulator receiver domain J152_01819 PF00072 Response regulator receiver domain J152_01819 PF00486 Transcriptional regulatory protein, C terminal J152_01820 PF06745 KaiC J152_01821 PF00072 Response regulator receiver domain J152_01821 PF13426 PAS domain J152_01821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01823 PF03918 Cytochrome C biogenesis protein J152_01824 PF08534 Redoxin J152_01825 PF01578 Cytochrome C assembly protein J152_01825 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J152_01826 PF03100 CcmE J152_01828 PF01578 Cytochrome C assembly protein J152_01829 PF00082 Subtilase family J152_01831 PF04542 Sigma-70 region 2 J152_01831 PF08281 Sigma-70, region 4 J152_01834 PF00034 Cytochrome c J152_01837 PF05523 WxcM-like, C-terminal J152_01841 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J152_01842 PF01943 Polysaccharide biosynthesis protein J152_01843 PF00535 Glycosyl transferase family 2 J152_01846 PF08241 Methyltransferase domain J152_01850 PF00534 Glycosyl transferases group 1 J152_01850 PF13579 Glycosyl transferase 4-like domain J152_01853 PF00005 ABC transporter J152_01854 PF00664 ABC transporter transmembrane region J152_01854 PF00005 ABC transporter J152_01855 PF07690 Major Facilitator Superfamily J152_01856 PF00296 Luciferase-like monooxygenase J152_01859 PF01595 Cyclin M transmembrane N-terminal domain J152_01859 PF03471 Transporter associated domain J152_01859 PF00571 CBS domain J152_01861 PF01384 Phosphate transporter family J152_01864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_01864 PF00204 DNA gyrase B J152_01864 PF01751 Toprim domain J152_01864 PF00986 DNA gyrase B subunit, carboxyl terminus J152_01866 PF06418 CTP synthase N-terminus J152_01866 PF00117 Glutamine amidotransferase class-I J152_01867 PF00793 DAHP synthetase I family J152_01869 PF00113 Enolase, C-terminal TIM barrel domain J152_01869 PF03952 Enolase, N-terminal domain J152_01870 PF04977 Septum formation initiator J152_01871 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J152_01872 PF02542 YgbB family J152_01873 PF01142 tRNA pseudouridine synthase D (TruD) J152_01874 PF01713 Smr domain J152_01875 PF01975 Survival protein SurE J152_01877 PF09335 SNARE associated Golgi protein J152_01878 PF01551 Peptidase family M23 J152_01878 PF01476 LysM domain J152_01880 PF04430 Protein of unknown function (DUF498/DUF598) J152_01881 PF01985 CRS1 / YhbY (CRM) domain J152_01882 PF01728 FtsJ-like methyltransferase J152_01883 PF00004 ATPase family associated with various cellular activities (AAA) J152_01883 PF01434 Peptidase family M41 J152_01883 PF06480 FtsH Extracellular J152_01883 PF17862 AAA+ lid domain J152_01884 PF00809 Pterin binding enzyme J152_01886 PF17209 Hfq protein J152_01887 PF16360 GTP-binding GTPase Middle Region J152_01887 PF13167 GTP-binding GTPase N-terminal J152_01887 PF01926 50S ribosome-binding GTPase J152_01888 PF02464 Competence-damaged protein J152_01889 PF03109 ABC1 family J152_01890 PF00717 Peptidase S24-like J152_01890 PF01726 LexA DNA binding domain J152_01891 PF00154 recA bacterial DNA recombination protein J152_01892 PF02631 RecX family J152_01893 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J152_01893 PF02272 DHHA1 domain J152_01893 PF01411 tRNA synthetases class II (A) J152_01894 PF02599 Global regulator protein family J152_01896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_01896 PF08447 PAS fold J152_01896 PF13426 PAS domain J152_01897 PF17954 Quercetinase C-terminal cupin domain J152_01897 PF02678 Pirin J152_01898 PF03466 LysR substrate binding domain J152_01898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01903 PF08543 Phosphomethylpyrimidine kinase J152_01903 PF02581 Thiamine monophosphate synthase J152_01906 PF02562 PhoH-like protein J152_01906 PF13638 PIN domain J152_01907 PF00578 AhpC/TSA family J152_01910 PF00701 Dihydrodipicolinate synthetase family J152_01912 PF11953 Domain of unknown function (DUF3470) J152_01912 PF00037 4Fe-4S binding domain J152_01913 PF05035 2-keto-3-deoxy-galactonokinase J152_01914 PF08450 SMP-30/Gluconolactonase/LRE-like region J152_01915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J152_01915 PF13378 Enolase C-terminal domain-like J152_01916 PF01081 KDPG and KHG aldolase J152_01918 PF03466 LysR substrate binding domain J152_01918 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_01921 PF03442 Carbohydrate binding domain X2 J152_01921 PF00942 Cellulose binding domain J152_01924 PF16338 Domain of unknown function (DUF4968) J152_01924 PF01055 Glycosyl hydrolases family 31 J152_01924 PF17137 Domain of unknown function (DUF5110) J152_01926 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J152_01926 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J152_01928 PF00083 Sugar (and other) transporter J152_01931 PF01520 N-acetylmuramoyl-L-alanine amidase J152_01932 PF02649 Type I GTP cyclohydrolase folE2 J152_01936 PF01743 Poly A polymerase head domain J152_01936 PF12627 Probable RNA and SrmB- binding site of polymerase A J152_01936 PF12626 Polymerase A arginine-rich C-terminus J152_01937 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J152_01938 PF02548 Ketopantoate hydroxymethyltransferase J152_01939 PF02569 Pantoate-beta-alanine ligase J152_01940 PF02261 Aspartate decarboxylase J152_01941 PF00342 Phosphoglucose isomerase J152_01945 PF01915 Glycosyl hydrolase family 3 C-terminal domain J152_01945 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_01945 PF14310 Fibronectin type III-like domain J152_01946 PF00474 Sodium:solute symporter family J152_01947 PF00990 Diguanylate cyclase, GGDEF domain J152_01947 PF00360 Phytochrome region J152_01947 PF01590 GAF domain J152_01947 PF00563 EAL domain J152_01948 PF00150 Cellulase (glycosyl hydrolase family 5) J152_01948 PF02013 Cellulose or protein binding domain J152_01949 PF00072 Response regulator receiver domain J152_01951 PF04551 GcpE protein J152_01952 PF01569 PAP2 superfamily J152_01953 PF07690 Major Facilitator Superfamily J152_01954 PF01177 Asp/Glu/Hydantoin racemase J152_01955 PF00892 EamA-like transporter family J152_01956 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J152_01956 PF01565 FAD binding domain J152_01957 PF01180 Dihydroorotate dehydrogenase J152_01960 PF00171 Aldehyde dehydrogenase family J152_01963 PF00535 Glycosyl transferase family 2 J152_01964 PF14883 Hypothetical glycosyl hydrolase family 13 J152_01964 PF01522 Polysaccharide deacetylase J152_01966 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J152_01966 PF08479 POTRA domain, ShlB-type J152_01966 PF17287 POTRA domain J152_01967 PF04829 Pre-toxin domain with VENN motif J152_01967 PF13332 Hemagglutinin repeat J152_01967 PF05594 Haemagluttinin repeat J152_01968 PF13332 Hemagglutinin repeat J152_01968 PF05594 Haemagluttinin repeat J152_01968 PF04829 Pre-toxin domain with VENN motif J152_01970 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J152_01970 PF13018 Extended Signal Peptide of Type V secretion system J152_01970 PF05594 Haemagluttinin repeat J152_01970 PF13332 Hemagglutinin repeat J152_01970 PF05860 haemagglutination activity domain J152_01972 PF13840 ACT domain J152_01972 PF00742 Homoserine dehydrogenase J152_01972 PF03447 Homoserine dehydrogenase, NAD binding domain J152_01972 PF01842 ACT domain J152_01972 PF00696 Amino acid kinase family J152_01973 PF00288 GHMP kinases N terminal domain J152_01973 PF08544 GHMP kinases C terminal J152_01975 PF00291 Pyridoxal-phosphate dependent enzyme J152_01975 PF14821 Threonine synthase N terminus J152_01977 PF13545 Crp-like helix-turn-helix domain J152_01977 PF00027 Cyclic nucleotide-binding domain J152_01978 PF03129 Anticodon binding domain J152_01978 PF13393 Histidyl-tRNA synthetase J152_01980 PF08029 HisG, C-terminal domain J152_01980 PF01634 ATP phosphoribosyltransferase J152_01981 PF00815 Histidinol dehydrogenase J152_01982 PF00155 Aminotransferase class I and II J152_01983 PF00475 Imidazoleglycerol-phosphate dehydratase J152_01984 PF00117 Glutamine amidotransferase class-I J152_01985 PF00977 Histidine biosynthesis protein J152_01986 PF00977 Histidine biosynthesis protein J152_01987 PF01502 Phosphoribosyl-AMP cyclohydrolase J152_01987 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J152_01991 PF03079 ARD/ARD' family J152_01992 PF00596 Class II Aldolase and Adducin N-terminal domain J152_01993 PF13520 Amino acid permease J152_01994 PF13520 Amino acid permease J152_01996 PF01842 ACT domain J152_01996 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J152_01996 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J152_01997 PF02913 FAD linked oxidases, C-terminal domain J152_01997 PF01565 FAD binding domain J152_02001 PF09285 Elongation factor P, C-terminal J152_02001 PF08207 Elongation factor P (EF-P) KOW-like domain J152_02001 PF01132 Elongation factor P (EF-P) OB domain J152_02002 PF00106 short chain dehydrogenase J152_02003 PF00682 HMGL-like J152_02005 PF00378 Enoyl-CoA hydratase/isomerase J152_02007 PF02421 Ferrous iron transport protein B J152_02007 PF07664 Ferrous iron transport protein B C terminus J152_02007 PF07670 Nucleoside recognition J152_02010 PF00155 Aminotransferase class I and II J152_02011 PF03473 MOSC domain J152_02011 PF03475 3-alpha domain J152_02012 PF01113 Dihydrodipicolinate reductase, N-terminus J152_02012 PF05173 Dihydrodipicolinate reductase, C-terminus J152_02013 PF00117 Glutamine amidotransferase class-I J152_02013 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J152_02015 PF02142 MGS-like domain J152_02015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J152_02015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J152_02016 PF01272 Transcription elongation factor, GreA/GreB, C-term J152_02016 PF03449 Transcription elongation factor, N-terminal J152_02018 PF01368 DHH family J152_02018 PF02272 DHHA1 domain J152_02018 PF17768 RecJ OB domain J152_02026 PF04397 LytTr DNA-binding domain J152_02026 PF00072 Response regulator receiver domain J152_02027 PF00472 RF-1 domain J152_02027 PF03462 PCRF domain J152_02028 PF00152 tRNA synthetases class II (D, K and N) J152_02028 PF01336 OB-fold nucleic acid binding domain J152_02029 PF00072 Response regulator receiver domain J152_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02030 PF01627 Hpt domain J152_02030 PF00072 Response regulator receiver domain J152_02030 PF00512 His Kinase A (phospho-acceptor) domain J152_02031 PF00378 Enoyl-CoA hydratase/isomerase J152_02032 PF13193 AMP-binding enzyme C-terminal domain J152_02032 PF00501 AMP-binding enzyme J152_02034 PF00694 Aconitase C-terminal domain J152_02034 PF00330 Aconitase family (aconitate hydratase) J152_02037 PF06434 Aconitate hydratase 2 N-terminus J152_02037 PF11791 Aconitate B N-terminal domain J152_02037 PF00330 Aconitase family (aconitate hydratase) J152_02038 PF00561 alpha/beta hydrolase fold J152_02039 PF00990 Diguanylate cyclase, GGDEF domain J152_02039 PF03707 Bacterial signalling protein N terminal repeat J152_02039 PF00563 EAL domain J152_02040 PF00072 Response regulator receiver domain J152_02040 PF01339 CheB methylesterase J152_02041 PF03975 CheD chemotactic sensory transduction J152_02042 PF01739 CheR methyltransferase, SAM binding domain J152_02042 PF03705 CheR methyltransferase, all-alpha domain J152_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02043 PF00672 HAMP domain J152_02043 PF02203 Tar ligand binding domain homologue J152_02044 PF02203 Tar ligand binding domain homologue J152_02044 PF00672 HAMP domain J152_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02045 PF02203 Tar ligand binding domain homologue J152_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02045 PF00672 HAMP domain J152_02046 PF02203 Tar ligand binding domain homologue J152_02046 PF00672 HAMP domain J152_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02047 PF02203 Tar ligand binding domain homologue J152_02047 PF00672 HAMP domain J152_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02048 PF00672 HAMP domain J152_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02049 PF00672 HAMP domain J152_02049 PF02203 Tar ligand binding domain homologue J152_02049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02051 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02051 PF02203 Tar ligand binding domain homologue J152_02051 PF00672 HAMP domain J152_02052 PF00672 HAMP domain J152_02052 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02052 PF17200 Single Cache domain 2 J152_02052 PF00672 HAMP domain J152_02052 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02052 PF17200 Single Cache domain 2 J152_02054 PF00672 HAMP domain J152_02054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02054 PF02203 Tar ligand binding domain homologue J152_02055 PF01584 CheW-like domain J152_02055 PF02895 Signal transducing histidine kinase, homodimeric domain J152_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02055 PF01627 Hpt domain J152_02055 PF09078 CheY binding J152_02056 PF00072 Response regulator receiver domain J152_02058 PF01584 CheW-like domain J152_02059 PF13614 AAA domain J152_02060 PF00691 OmpA family J152_02060 PF13677 Membrane MotB of proton-channel complex MotA/MotB J152_02061 PF01618 MotA/TolQ/ExbB proton channel family J152_02064 PF00069 Protein kinase domain J152_02064 PF03793 PASTA domain J152_02074 PF01527 Transposase J152_02080 PF13186 Iron-sulfur cluster-binding domain J152_02080 PF04055 Radical SAM superfamily J152_02083 PF01584 CheW-like domain J152_02083 PF02895 Signal transducing histidine kinase, homodimeric domain J152_02083 PF07194 P2 response regulator binding domain J152_02083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02083 PF01627 Hpt domain J152_02084 PF04344 Chemotaxis phosphatase, CheZ J152_02085 PF00072 Response regulator receiver domain J152_02086 PF04542 Sigma-70 region 2 J152_02086 PF04545 Sigma-70, region 4 J152_02086 PF04539 Sigma-70 region 3 J152_02087 PF10609 NUBPL iron-transfer P-loop NTPase J152_02088 PF00448 SRP54-type protein, GTPase domain J152_02089 PF00771 FHIPEP family J152_02090 PF01312 FlhB HrpN YscU SpaS Family J152_02091 PF00990 Diguanylate cyclase, GGDEF domain J152_02091 PF00563 EAL domain J152_02091 PF03707 Bacterial signalling protein N terminal repeat J152_02092 PF13188 PAS domain J152_02092 PF03707 Bacterial signalling protein N terminal repeat J152_02092 PF00563 EAL domain J152_02092 PF00990 Diguanylate cyclase, GGDEF domain J152_02093 PF03707 Bacterial signalling protein N terminal repeat J152_02093 PF00563 EAL domain J152_02093 PF13188 PAS domain J152_02093 PF00990 Diguanylate cyclase, GGDEF domain J152_02094 PF01311 Bacterial export proteins, family 1 J152_02095 PF01313 Bacterial export proteins, family 3 J152_02097 PF00813 FliP family J152_02098 PF04347 Flagellar biosynthesis protein, FliO J152_02099 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J152_02100 PF02154 Flagellar motor switch protein FliM J152_02100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J152_02104 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J152_02104 PF18269 T3SS EscN ATPase C-terminal domain J152_02106 PF14842 FliG N-terminal domain J152_02106 PF14841 FliG middle domain J152_02106 PF01706 FliG C-terminal domain J152_02107 PF01514 Secretory protein of YscJ/FliF family J152_02107 PF08345 Flagellar M-ring protein C-terminal J152_02108 PF02049 Flagellar hook-basal body complex protein FliE J152_02109 PF00535 Glycosyl transferase family 2 J152_02109 PF00534 Glycosyl transferases group 1 J152_02117 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J152_02117 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J152_02119 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J152_02120 PF02954 Bacterial regulatory protein, Fis family J152_02120 PF00158 Sigma-54 interaction domain J152_02120 PF00072 Response regulator receiver domain J152_02121 PF01339 CheB methylesterase J152_02121 PF00072 Response regulator receiver domain J152_02122 PF04963 Sigma-54 factor, core binding domain J152_02122 PF00309 Sigma-54 factor, Activator interacting domain (AID) J152_02122 PF04552 Sigma-54, DNA binding domain J152_02123 PF00196 Bacterial regulatory proteins, luxR family J152_02123 PF00072 Response regulator receiver domain J152_02126 PF02561 Flagellar protein FliS J152_02127 PF07196 Flagellin hook IN motif J152_02127 PF02465 Flagellar hook-associated protein 2 N-terminus J152_02127 PF07195 Flagellar hook-associated protein 2 C-terminus J152_02128 PF00669 Bacterial flagellin N-terminal helical region J152_02128 PF00700 Bacterial flagellin C-terminal helical region J152_02129 PF00669 Bacterial flagellin N-terminal helical region J152_02129 PF00700 Bacterial flagellin C-terminal helical region J152_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J152_02130 PF07196 Flagellin hook IN motif J152_02131 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J152_02131 PF10135 Rod binding protein J152_02132 PF02119 Flagellar P-ring protein J152_02133 PF02107 Flagellar L-ring protein J152_02134 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J152_02134 PF00460 Flagella basal body rod protein J152_02135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J152_02135 PF00460 Flagella basal body rod protein J152_02136 PF00460 Flagella basal body rod protein J152_02136 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J152_02136 PF07559 Flagellar basal body protein FlaE J152_02137 PF03963 Flagellar hook capping protein - N-terminal region J152_02138 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J152_02138 PF00460 Flagella basal body rod protein J152_02140 PF00072 Response regulator receiver domain J152_02140 PF01584 CheW-like domain J152_02144 PF00989 PAS fold J152_02144 PF13188 PAS domain J152_02144 PF13426 PAS domain J152_02144 PF00512 His Kinase A (phospho-acceptor) domain J152_02144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02145 PF03707 Bacterial signalling protein N terminal repeat J152_02145 PF00990 Diguanylate cyclase, GGDEF domain J152_02145 PF00563 EAL domain J152_02146 PF07730 Histidine kinase J152_02146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02147 PF00990 Diguanylate cyclase, GGDEF domain J152_02147 PF03707 Bacterial signalling protein N terminal repeat J152_02147 PF00563 EAL domain J152_02149 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02149 PF00672 HAMP domain J152_02149 PF12729 Four helix bundle sensory module for signal transduction J152_02150 PF04356 Protein of unknown function (DUF489) J152_02152 PF00293 NUDIX domain J152_02153 PF02617 ATP-dependent Clp protease adaptor protein ClpS J152_02154 PF00004 ATPase family associated with various cellular activities (AAA) J152_02154 PF07724 AAA domain (Cdc48 subfamily) J152_02154 PF17871 AAA lid domain J152_02154 PF02861 Clp amino terminal domain, pathogenicity island component J152_02154 PF10431 C-terminal, D2-small domain, of ClpB protein J152_02155 PF01176 Translation initiation factor 1A / IF-1 J152_02156 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J152_02158 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_02159 PF01580 FtsK/SpoIIIE family J152_02159 PF09397 Ftsk gamma domain J152_02159 PF17854 FtsK alpha domain J152_02159 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J152_02161 PF03548 Outer membrane lipoprotein carrier protein LolA J152_02163 PF16193 AAA C-terminal domain J152_02163 PF12002 MgsA AAA+ ATPase C terminal J152_02163 PF00004 ATPase family associated with various cellular activities (AAA) J152_02165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J152_02167 PF02803 Thiolase, C-terminal domain J152_02167 PF00108 Thiolase, N-terminal domain J152_02168 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J152_02168 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J152_02168 PF00378 Enoyl-CoA hydratase/isomerase J152_02170 PF00334 Nucleoside diphosphate kinase J152_02171 PF04055 Radical SAM superfamily J152_02173 PF13464 Domain of unknown function (DUF4115) J152_02175 PF13360 PQQ-like domain J152_02175 PF01011 PQQ enzyme repeat J152_02176 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J152_02176 PF01926 50S ribosome-binding GTPase J152_02177 PF03453 MoeA N-terminal region (domain I and II) J152_02177 PF00994 Probable molybdopterin binding domain J152_02177 PF03454 MoeA C-terminal region (domain IV) J152_02178 PF00899 ThiF family J152_02183 PF08240 Alcohol dehydrogenase GroES-like domain J152_02183 PF00107 Zinc-binding dehydrogenase J152_02183 PF13823 Alcohol dehydrogenase GroES-associated J152_02185 PF03372 Endonuclease/Exonuclease/phosphatase family J152_02187 PF03453 MoeA N-terminal region (domain I and II) J152_02187 PF03454 MoeA C-terminal region (domain IV) J152_02187 PF00994 Probable molybdopterin binding domain J152_02188 PF12804 MobA-like NTP transferase domain J152_02190 PF00561 alpha/beta hydrolase fold J152_02191 PF01566 Natural resistance-associated macrophage protein J152_02192 PF02742 Iron dependent repressor, metal binding and dimerisation domain J152_02192 PF01325 Iron dependent repressor, N-terminal DNA binding domain J152_02193 PF14437 MafB19-like deaminase J152_02194 PF00929 Exonuclease J152_02195 PF05552 Conserved TM helix J152_02195 PF00924 Mechanosensitive ion channel J152_02196 PF00391 PEP-utilising enzyme, mobile domain J152_02196 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J152_02196 PF02896 PEP-utilising enzyme, TIM barrel domain J152_02197 PF03618 Kinase/pyrophosphorylase J152_02201 PF01066 CDP-alcohol phosphatidyltransferase J152_02203 PF00561 alpha/beta hydrolase fold J152_02206 PF01266 FAD dependent oxidoreductase J152_02206 PF00355 Rieske [2Fe-2S] domain J152_02208 PF00575 S1 RNA binding domain J152_02208 PF09371 Tex-like protein N-terminal domain J152_02208 PF16921 Tex protein YqgF-like domain J152_02208 PF17674 HHH domain J152_02209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02209 PF00512 His Kinase A (phospho-acceptor) domain J152_02209 PF09308 LuxQ, periplasmic J152_02209 PF00072 Response regulator receiver domain J152_02217 PF00034 Cytochrome c J152_02219 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_02220 PF00873 AcrB/AcrD/AcrF family J152_02221 PF00873 AcrB/AcrD/AcrF family J152_02222 PF01081 KDPG and KHG aldolase J152_02223 PF00920 Dehydratase family J152_02224 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J152_02225 PF02685 Glucokinase J152_02226 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J152_02226 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J152_02227 PF17912 MalK OB fold domain J152_02227 PF00005 ABC transporter J152_02230 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J152_02231 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J152_02232 PF00890 FAD binding domain J152_02232 PF02910 Fumarate reductase flavoprotein C-term J152_02234 PF13085 2Fe-2S iron-sulfur cluster binding domain J152_02235 PF03937 Flavinator of succinate dehydrogenase J152_02237 PF12704 MacB-like periplasmic core domain J152_02237 PF02687 FtsX-like permease family J152_02238 PF00005 ABC transporter J152_02240 PF03772 Competence protein J152_02240 PF00753 Metallo-beta-lactamase superfamily J152_02241 PF01618 MotA/TolQ/ExbB proton channel family J152_02243 PF00005 ABC transporter J152_02243 PF00664 ABC transporter transmembrane region J152_02244 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J152_02245 PF02348 Cytidylyltransferase J152_02246 PF01451 Low molecular weight phosphotyrosine protein phosphatase J152_02248 PF08459 UvrC Helix-hairpin-helix N-terminal J152_02248 PF02151 UvrB/uvrC motif J152_02248 PF01541 GIY-YIG catalytic domain J152_02249 PF01066 CDP-alcohol phosphatidyltransferase J152_02253 PF00668 Condensation domain J152_02253 PF13193 AMP-binding enzyme C-terminal domain J152_02253 PF00501 AMP-binding enzyme J152_02253 PF00550 Phosphopantetheine attachment site J152_02254 PF00550 Phosphopantetheine attachment site J152_02254 PF13193 AMP-binding enzyme C-terminal domain J152_02254 PF00975 Thioesterase domain J152_02254 PF00501 AMP-binding enzyme J152_02254 PF00668 Condensation domain J152_02256 PF01527 Transposase J152_02258 PF01527 Transposase J152_02259 PF00589 Phage integrase family J152_02261 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J152_02261 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J152_02261 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J152_02263 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J152_02266 PF00072 Response regulator receiver domain J152_02266 PF00196 Bacterial regulatory proteins, luxR family J152_02267 PF10150 Ribonuclease E/G family J152_02267 PF00575 S1 RNA binding domain J152_02267 PF12111 Polyribonucleotide phosphorylase C terminal J152_02268 PF01479 S4 domain J152_02268 PF00849 RNA pseudouridylate synthase J152_02269 PF11737 Protein of unknown function (DUF3300) J152_02270 PF02535 ZIP Zinc transporter J152_02272 PF01329 Pterin 4 alpha carbinolamine dehydratase J152_02273 PF01106 NifU-like domain J152_02284 PF00106 short chain dehydrogenase J152_02289 PF01527 Transposase J152_02290 PF01494 FAD binding domain J152_02291 PF09335 SNARE associated Golgi protein J152_02293 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J152_02294 PF07995 Glucose / Sorbosone dehydrogenase J152_02296 PF00144 Beta-lactamase J152_02297 PF00072 Response regulator receiver domain J152_02297 PF04397 LytTr DNA-binding domain J152_02298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02298 PF07694 5TMR of 5TMR-LYT J152_02298 PF06580 Histidine kinase J152_02300 PF03797 Autotransporter beta-domain J152_02300 PF00082 Subtilase family J152_02301 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_02302 PF00873 AcrB/AcrD/AcrF family J152_02304 PF13426 PAS domain J152_02304 PF00072 Response regulator receiver domain J152_02304 PF08448 PAS fold J152_02304 PF00512 His Kinase A (phospho-acceptor) domain J152_02304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02305 PF00196 Bacterial regulatory proteins, luxR family J152_02305 PF00072 Response regulator receiver domain J152_02306 PF12951 Passenger-associated-transport-repeat J152_02306 PF12951 Passenger-associated-transport-repeat J152_02307 PF00563 EAL domain J152_02307 PF08448 PAS fold J152_02307 PF08447 PAS fold J152_02307 PF00990 Diguanylate cyclase, GGDEF domain J152_02310 PF05974 Domain of unknown function (DUF892) J152_02312 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J152_02314 PF10414 Sirohaem synthase dimerisation region J152_02314 PF14824 Sirohaem biosynthesis protein central J152_02314 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J152_02317 PF05977 Transmembrane secretion effector J152_02318 PF07969 Amidohydrolase family J152_02320 PF00857 Isochorismatase family J152_02323 PF00072 Response regulator receiver domain J152_02323 PF00196 Bacterial regulatory proteins, luxR family J152_02326 PF03466 LysR substrate binding domain J152_02326 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_02327 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J152_02327 PF00361 Proton-conducting membrane transporter J152_02327 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J152_02328 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J152_02330 PF01527 Transposase J152_02331 PF01381 Helix-turn-helix J152_02332 PF05284 Protein of unknown function (DUF736) J152_02333 PF04002 RadC-like JAB domain J152_02338 PF00589 Phage integrase family J152_02338 PF13356 Arm DNA-binding domain J152_02341 PF00593 TonB dependent receptor J152_02341 PF07715 TonB-dependent Receptor Plug Domain J152_02345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J152_02350 PF07715 TonB-dependent Receptor Plug Domain J152_02350 PF00593 TonB dependent receptor J152_02353 PF10947 Protein of unknown function (DUF2628) J152_02355 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J152_02355 PF00722 Glycosyl hydrolases family 16 J152_02360 PF00664 ABC transporter transmembrane region J152_02360 PF00005 ABC transporter J152_02360 PF03412 Peptidase C39 family J152_02362 PF13614 AAA domain J152_02370 PF01751 Toprim domain J152_02370 PF01131 DNA topoisomerase J152_02371 PF00145 C-5 cytosine-specific DNA methylase J152_02383 PF06250 YhcG PDDEXK nuclease domain J152_02383 PF17761 DUF1016 N-terminal domain J152_02384 PF01527 Transposase J152_02386 PF00892 EamA-like transporter family J152_02387 PF00892 EamA-like transporter family J152_02389 PF02525 Flavodoxin-like fold J152_02390 PF02798 Glutathione S-transferase, N-terminal domain J152_02390 PF00043 Glutathione S-transferase, C-terminal domain J152_02391 PF05544 Proline racemase J152_02392 PF03358 NADPH-dependent FMN reductase J152_02394 PF07690 Major Facilitator Superfamily J152_02395 PF02311 AraC-like ligand binding domain J152_02395 PF12833 Helix-turn-helix domain J152_02425 PF00580 UvrD/REP helicase N-terminal domain J152_02425 PF12462 DNA helicase IV / RNA helicase N terminal J152_02425 PF13361 UvrD-like helicase C-terminal domain J152_02440 PF03466 LysR substrate binding domain J152_02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_02441 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J152_02441 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J152_02442 PF03401 Tripartite tricarboxylate transporter family receptor J152_02446 PF04002 RadC-like JAB domain J152_02453 PF13356 Arm DNA-binding domain J152_02453 PF00589 Phage integrase family J152_02454 PF00958 GMP synthase C terminal domain J152_02454 PF02540 NAD synthase J152_02454 PF00117 Glutamine amidotransferase class-I J152_02455 PF00571 CBS domain J152_02455 PF00478 IMP dehydrogenase / GMP reductase domain J152_02456 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J152_02456 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J152_02458 PF02254 TrkA-N domain J152_02458 PF00999 Sodium/hydrogen exchanger family J152_02459 PF00483 Nucleotidyl transferase J152_02460 PF02719 Polysaccharide biosynthesis protein J152_02461 PF00953 Glycosyl transferase family 4 J152_02462 PF18073 Rubredoxin metal binding domain J152_02464 PF00216 Bacterial DNA-binding protein J152_02465 PF00575 S1 RNA binding domain J152_02466 PF02224 Cytidylate kinase J152_02467 PF00444 Ribosomal protein L36 J152_02470 PF04371 Porphyromonas-type peptidyl-arginine deiminase J152_02471 PF00795 Carbon-nitrogen hydrolase J152_02476 PF00528 Binding-protein-dependent transport system inner membrane component J152_02477 PF00528 Binding-protein-dependent transport system inner membrane component J152_02481 PF00356 Bacterial regulatory proteins, lacI family J152_02483 PF03795 YCII-related domain J152_02484 PF02616 Segregation and condensation protein ScpA J152_02485 PF04079 Segregation and condensation complex subunit ScpB J152_02486 PF01479 S4 domain J152_02486 PF00849 RNA pseudouridylate synthase J152_02489 PF00795 Carbon-nitrogen hydrolase J152_02490 PF00155 Aminotransferase class I and II J152_02491 PF00005 ABC transporter J152_02492 PF03379 CcmB protein J152_02493 PF01578 Cytochrome C assembly protein J152_02495 PF03100 CcmE J152_02496 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J152_02496 PF01578 Cytochrome C assembly protein J152_02497 PF08534 Redoxin J152_02498 PF03918 Cytochrome C biogenesis protein J152_02500 PF00561 alpha/beta hydrolase fold J152_02501 PF00313 'Cold-shock' DNA-binding domain J152_02502 PF00664 ABC transporter transmembrane region J152_02502 PF00005 ABC transporter J152_02503 PF00664 ABC transporter transmembrane region J152_02503 PF00005 ABC transporter J152_02504 PF01654 Cytochrome bd terminal oxidase subunit I J152_02505 PF02322 Cytochrome bd terminal oxidase subunit II J152_02509 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J152_02509 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J152_02510 PF00171 Aldehyde dehydrogenase family J152_02511 PF01472 PUA domain J152_02511 PF00696 Amino acid kinase family J152_02513 PF00206 Lyase J152_02514 PF01118 Semialdehyde dehydrogenase, NAD binding domain J152_02516 PF00696 Amino acid kinase family J152_02516 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J152_02519 PF00764 Arginosuccinate synthase J152_02520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J152_02520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J152_02522 PF01406 tRNA synthetases class I (C) catalytic domain J152_02522 PF09190 DALR domain J152_02523 PF02657 Fe-S metabolism associated domain J152_02525 PF01258 Prokaryotic dksA/traR C4-type zinc finger J152_02526 PF01809 Putative membrane protein insertion efficiency factor J152_02527 PF01979 Amidohydrolase family J152_02528 PF08460 Bacterial SH3 domain J152_02528 PF01551 Peptidase family M23 J152_02531 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J152_02532 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J152_02534 PF00753 Metallo-beta-lactamase superfamily J152_02538 PF01527 Transposase J152_02541 PF00295 Glycosyl hydrolases family 28 J152_02543 PF13419 Haloacid dehalogenase-like hydrolase J152_02545 PF01979 Amidohydrolase family J152_02547 PF09285 Elongation factor P, C-terminal J152_02547 PF08207 Elongation factor P (EF-P) KOW-like domain J152_02547 PF01132 Elongation factor P (EF-P) OB domain J152_02548 PF04055 Radical SAM superfamily J152_02549 PF03707 Bacterial signalling protein N terminal repeat J152_02549 PF00990 Diguanylate cyclase, GGDEF domain J152_02549 PF13188 PAS domain J152_02549 PF00563 EAL domain J152_02551 PF00588 SpoU rRNA Methylase family J152_02552 PF00459 Inositol monophosphatase family J152_02553 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J152_02553 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J152_02554 PF00545 ribonuclease J152_02557 PF03880 DbpA RNA binding domain J152_02557 PF00270 DEAD/DEAH box helicase J152_02557 PF00271 Helicase conserved C-terminal domain J152_02558 PF00156 Phosphoribosyl transferase domain J152_02559 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J152_02560 PF00135 Carboxylesterase family J152_02561 PF02798 Glutathione S-transferase, N-terminal domain J152_02561 PF14497 Glutathione S-transferase, C-terminal domain J152_02562 PF00313 'Cold-shock' DNA-binding domain J152_02563 PF07152 YaeQ protein J152_02565 PF00072 Response regulator receiver domain J152_02565 PF00563 EAL domain J152_02565 PF00990 Diguanylate cyclase, GGDEF domain J152_02566 PF01435 Peptidase family M48 J152_02567 PF00749 tRNA synthetases class I (E and Q), catalytic domain J152_02568 PF00106 short chain dehydrogenase J152_02569 PF05233 PHB accumulation regulatory domain J152_02569 PF07879 PHB/PHA accumulation regulator DNA-binding domain J152_02572 PF08676 MutL C terminal dimerisation domain J152_02572 PF01119 DNA mismatch repair protein, C-terminal domain J152_02573 PF01520 N-acetylmuramoyl-L-alanine amidase J152_02573 PF11741 AMIN domain J152_02574 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J152_02575 PF03853 YjeF-related protein N-terminus J152_02575 PF01256 Carbohydrate kinase J152_02576 PF08331 Domain of unknown function (DUF1730) J152_02577 PF13742 OB-fold nucleic acid binding domain J152_02577 PF02601 Exonuclease VII, large subunit J152_02579 PF03781 Sulfatase-modifying factor enzyme 1 J152_02580 PF00570 HRDC domain J152_02580 PF01612 3'-5' exonuclease J152_02582 PF13298 DNA polymerase Ligase (LigD) J152_02582 PF04679 ATP dependent DNA ligase C terminal region J152_02582 PF01068 ATP dependent DNA ligase domain J152_02586 PF00589 Phage integrase family J152_02590 PF05598 Transposase domain (DUF772) J152_02592 PF01527 Transposase J152_02596 PF01619 Proline dehydrogenase J152_02596 PF00171 Aldehyde dehydrogenase family J152_02596 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J152_02596 PF14850 DNA-binding domain of Proline dehydrogenase J152_02598 PF01527 Transposase J152_02600 PF00665 Integrase core domain J152_02600 PF13276 HTH-like domain J152_02600 PF13333 Integrase core domain J152_02602 PF02796 Helix-turn-helix domain of resolvase J152_02602 PF00239 Resolvase, N terminal domain J152_02605 PF02384 N-6 DNA Methylase J152_02606 PF09572 XamI restriction endonuclease J152_02618 PF01584 CheW-like domain J152_02619 PF12729 Four helix bundle sensory module for signal transduction J152_02619 PF00672 HAMP domain J152_02619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_02620 PF02245 Methylpurine-DNA glycosylase (MPG) J152_02621 PF00270 DEAD/DEAH box helicase J152_02621 PF08494 DEAD/H associated J152_02621 PF00271 Helicase conserved C-terminal domain J152_02624 PF04386 Stringent starvation protein B J152_02625 PF02798 Glutathione S-transferase, N-terminal domain J152_02625 PF00043 Glutathione S-transferase, C-terminal domain J152_02626 PF02167 Cytochrome C1 family J152_02627 PF00032 Cytochrome b(C-terminal)/b6/petD J152_02627 PF00033 Cytochrome b/b6/petB J152_02628 PF00355 Rieske [2Fe-2S] domain J152_02628 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J152_02629 PF01464 Transglycosylase SLT domain J152_02632 PF01938 TRAM domain J152_02632 PF04055 Radical SAM superfamily J152_02632 PF00919 Uncharacterized protein family UPF0004 J152_02633 PF02562 PhoH-like protein J152_02635 PF02130 Uncharacterized protein family UPF0054 J152_02637 PF03471 Transporter associated domain J152_02637 PF00571 CBS domain J152_02640 PF00171 Aldehyde dehydrogenase family J152_02641 PF00528 Binding-protein-dependent transport system inner membrane component J152_02642 PF00528 Binding-protein-dependent transport system inner membrane component J152_02643 PF00005 ABC transporter J152_02643 PF08402 TOBE domain J152_02644 PF02321 Outer membrane efflux protein J152_02645 PF07690 Major Facilitator Superfamily J152_02646 PF13533 Biotin-lipoyl like J152_02647 PF13416 Bacterial extracellular solute-binding protein J152_02648 PF00202 Aminotransferase class-III J152_02649 PF00120 Glutamine synthetase, catalytic domain J152_02650 PF07722 Peptidase C26 J152_02651 PF00120 Glutamine synthetase, catalytic domain J152_02652 PF01266 FAD dependent oxidoreductase J152_02653 PF00990 Diguanylate cyclase, GGDEF domain J152_02653 PF00072 Response regulator receiver domain J152_02654 PF01814 Hemerythrin HHE cation binding domain J152_02655 PF00083 Sugar (and other) transporter J152_02655 PF07690 Major Facilitator Superfamily J152_02657 PF00384 Molybdopterin oxidoreductase J152_02658 PF02634 FdhD/NarQ family J152_02659 PF07690 Major Facilitator Superfamily J152_02660 PF00202 Aminotransferase class-III J152_02662 PF04286 Protein of unknown function (DUF445) J152_02663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02663 PF00672 HAMP domain J152_02663 PF00512 His Kinase A (phospho-acceptor) domain J152_02663 PF01627 Hpt domain J152_02663 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J152_02663 PF00072 Response regulator receiver domain J152_02664 PF00072 Response regulator receiver domain J152_02665 PF07690 Major Facilitator Superfamily J152_02666 PF05088 Bacterial NAD-glutamate dehydrogenase J152_02668 PF00529 HlyD membrane-fusion protein of T1SS J152_02668 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_02669 PF00873 AcrB/AcrD/AcrF family J152_02670 PF00356 Bacterial regulatory proteins, lacI family J152_02671 PF00391 PEP-utilising enzyme, mobile domain J152_02671 PF02896 PEP-utilising enzyme, TIM barrel domain J152_02671 PF00381 PTS HPr component phosphorylation site J152_02671 PF05524 PEP-utilising enzyme, N-terminal J152_02671 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J152_02672 PF00294 pfkB family carbohydrate kinase J152_02673 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J152_02681 PF07549 SecD/SecF GG Motif J152_02681 PF02355 Protein export membrane protein J152_02682 PF07549 SecD/SecF GG Motif J152_02682 PF13721 SecD export protein N-terminal TM region J152_02682 PF02355 Protein export membrane protein J152_02683 PF02699 Preprotein translocase subunit J152_02684 PF01702 Queuine tRNA-ribosyltransferase J152_02685 PF02547 Queuosine biosynthesis protein J152_02694 PF02927 Cellulase N-terminal ig-like domain J152_02694 PF00759 Glycosyl hydrolase family 9 J152_02696 PF00037 4Fe-4S binding domain J152_02699 PF01467 Cytidylyltransferase-like J152_02701 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02701 PF00183 Hsp90 protein J152_02705 PF07715 TonB-dependent Receptor Plug Domain J152_02705 PF00593 TonB dependent receptor J152_02707 PF04616 Glycosyl hydrolases family 43 J152_02708 PF07532 Bacterial Ig-like domain (group 4) J152_02709 PF00593 TonB dependent receptor J152_02709 PF07715 TonB-dependent Receptor Plug Domain J152_02711 PF00082 Subtilase family J152_02711 PF09286 Pro-kumamolisin, activation domain J152_02717 PF13520 Amino acid permease J152_02720 PF01321 Creatinase/Prolidase N-terminal domain J152_02720 PF00557 Metallopeptidase family M24 J152_02721 PF00171 Aldehyde dehydrogenase family J152_02722 PF00701 Dihydrodipicolinate synthetase family J152_02723 PF04324 BFD-like [2Fe-2S] binding domain J152_02723 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_02725 PF01266 FAD dependent oxidoreductase J152_02726 PF05544 Proline racemase J152_02728 PF02881 SRP54-type protein, helical bundle domain J152_02728 PF00448 SRP54-type protein, GTPase domain J152_02729 PF00633 Helix-hairpin-helix motif J152_02729 PF14815 NUDIX domain J152_02729 PF10576 Iron-sulfur binding domain of endonuclease III J152_02729 PF00730 HhH-GPD superfamily base excision DNA repair protein J152_02730 PF04362 Bacterial Fe(2+) trafficking J152_02731 PF00072 Response regulator receiver domain J152_02731 PF13426 PAS domain J152_02731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02737 PF08212 Lipocalin-like domain J152_02739 PF02770 Acyl-CoA dehydrogenase, middle domain J152_02739 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_02739 PF12806 Acetyl-CoA dehydrogenase C-terminal like J152_02739 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_02741 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J152_02741 PF02779 Transketolase, pyrimidine binding domain J152_02741 PF02780 Transketolase, C-terminal domain J152_02745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J152_02746 PF16123 Hydroxyacylglutathione hydrolase C-terminus J152_02746 PF00753 Metallo-beta-lactamase superfamily J152_02747 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J152_02747 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J152_02750 PF03808 Glycosyl transferase WecB/TagA/CpsF family J152_02753 PF14667 Polysaccharide biosynthesis C-terminal domain J152_02755 PF00534 Glycosyl transferases group 1 J152_02755 PF13439 Glycosyltransferase Family 4 J152_02759 PF02397 Bacterial sugar transferase J152_02763 PF13411 MerR HTH family regulatory protein J152_02764 PF00216 Bacterial DNA-binding protein J152_02765 PF03483 B3/4 domain J152_02765 PF03147 Ferredoxin-fold anticodon binding domain J152_02765 PF01588 Putative tRNA binding domain J152_02765 PF03484 tRNA synthetase B5 domain J152_02765 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J152_02766 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J152_02766 PF01409 tRNA synthetases class II core domain (F) J152_02767 PF00453 Ribosomal protein L20 J152_02768 PF01632 Ribosomal protein L35 J152_02770 PF05198 Translation initiation factor IF-3, N-terminal domain J152_02770 PF00707 Translation initiation factor IF-3, C-terminal domain J152_02771 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J152_02771 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J152_02771 PF02824 TGS domain J152_02771 PF03129 Anticodon binding domain J152_02772 PF00356 Bacterial regulatory proteins, lacI family J152_02773 PF00128 Alpha amylase, catalytic domain J152_02773 PF00686 Starch binding domain J152_02774 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J152_02776 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J152_02776 PF14508 Glycosyl-hydrolase 97 N-terminal J152_02776 PF10566 Glycoside hydrolase 97 J152_02780 PF00128 Alpha amylase, catalytic domain J152_02782 PF01527 Transposase J152_02791 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J152_02792 PF05101 Type IV secretory pathway, VirB3-like protein J152_02794 PF01464 Transglycosylase SLT domain J152_02795 PF00437 Type II/IV secretion system protein J152_02796 PF03743 Bacterial conjugation TrbI-like protein J152_02800 PF02534 Type IV secretory system Conjugative DNA transfer J152_02803 PF00271 Helicase conserved C-terminal domain J152_02803 PF02151 UvrB/uvrC motif J152_02803 PF17757 UvrB interaction domain J152_02803 PF12344 Ultra-violet resistance protein B J152_02803 PF04851 Type III restriction enzyme, res subunit J152_02811 PF01527 Transposase J152_02820 PF01555 DNA methylase J152_02830 PF00182 Chitinase class I J152_02841 PF01527 Transposase J152_02842 PF07963 Prokaryotic N-terminal methylation motif J152_02842 PF00114 Pilin (bacterial filament) J152_02843 PF05567 Neisseria PilC beta-propeller domain J152_02846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02846 PF06580 Histidine kinase J152_02846 PF07694 5TMR of 5TMR-LYT J152_02847 PF11892 Domain of unknown function (DUF3412) J152_02847 PF03641 Possible lysine decarboxylase J152_02847 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J152_02848 PF00593 TonB dependent receptor J152_02849 PF01914 MarC family integral membrane protein J152_02851 PF00462 Glutaredoxin J152_02852 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J152_02852 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J152_02853 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J152_02853 PF02222 ATP-grasp domain J152_02854 PF00731 AIR carboxylase J152_02856 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J152_02856 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J152_02858 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J152_02858 PF01138 3' exoribonuclease family, domain 1 J152_02858 PF00013 KH domain J152_02858 PF00575 S1 RNA binding domain J152_02858 PF03725 3' exoribonuclease family, domain 2 J152_02859 PF00312 Ribosomal protein S15 J152_02860 PF09157 Pseudouridine synthase II TruB, C-terminal J152_02860 PF16198 tRNA pseudouridylate synthase B C-terminal domain J152_02860 PF01509 TruB family pseudouridylate synthase (N terminal domain) J152_02861 PF02033 Ribosome-binding factor A J152_02862 PF04760 Translation initiation factor IF-2, N-terminal region J152_02862 PF00009 Elongation factor Tu GTP binding domain J152_02862 PF11987 Translation-initiation factor 2 J152_02862 PF08364 Bacterial translation initiation factor IF-2 associated region J152_02863 PF00575 S1 RNA binding domain J152_02863 PF08529 NusA N-terminal domain J152_02863 PF13184 NusA-like KH domain J152_02864 PF17384 RimP C-terminal SH3 domain J152_02864 PF02576 RimP N-terminal domain J152_02866 PF00361 Proton-conducting membrane transporter J152_02867 PF00361 Proton-conducting membrane transporter J152_02867 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J152_02868 PF00361 Proton-conducting membrane transporter J152_02868 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J152_02869 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J152_02870 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J152_02871 PF12838 4Fe-4S dicluster domain J152_02872 PF00146 NADH dehydrogenase J152_02873 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J152_02873 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J152_02873 PF00384 Molybdopterin oxidoreductase J152_02874 PF10531 SLBB domain J152_02874 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J152_02874 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J152_02876 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J152_02877 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J152_02878 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J152_02879 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J152_02882 PF00121 Triosephosphate isomerase J152_02883 PF00106 short chain dehydrogenase J152_02886 PF03707 Bacterial signalling protein N terminal repeat J152_02886 PF00990 Diguanylate cyclase, GGDEF domain J152_02886 PF00563 EAL domain J152_02889 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J152_02889 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J152_02889 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J152_02889 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J152_02890 PF17848 Acetyl-coA carboxylase zinc finger domain J152_02890 PF01039 Carboxyl transferase domain J152_02891 PF00290 Tryptophan synthase alpha chain J152_02893 PF00291 Pyridoxal-phosphate dependent enzyme J152_02894 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_02894 PF03466 LysR substrate binding domain J152_02895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J152_02896 PF01416 tRNA pseudouridine synthase J152_02900 PF02774 Semialdehyde dehydrogenase, dimerisation domain J152_02900 PF01118 Semialdehyde dehydrogenase, NAD binding domain J152_02901 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J152_02901 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J152_02902 PF01264 Chorismate synthase J152_02903 PF05175 Methyltransferase small domain J152_02904 PF02630 SCO1/SenC J152_02905 PF02666 Phosphatidylserine decarboxylase J152_02907 PF05872 Bacterial protein of unknown function (DUF853) J152_02908 PF00293 NUDIX domain J152_02911 PF01272 Transcription elongation factor, GreA/GreB, C-term J152_02911 PF03449 Transcription elongation factor, N-terminal J152_02912 PF00919 Uncharacterized protein family UPF0004 J152_02912 PF04055 Radical SAM superfamily J152_02912 PF18693 TRAM domain J152_02913 PF01738 Dienelactone hydrolase family J152_02917 PF00692 dUTPase J152_02918 PF10609 NUBPL iron-transfer P-loop NTPase J152_02919 PF00593 TonB dependent receptor J152_02919 PF07715 TonB-dependent Receptor Plug Domain J152_02922 PF05649 Peptidase family M13 J152_02922 PF01431 Peptidase family M13 J152_02923 PF01431 Peptidase family M13 J152_02923 PF05649 Peptidase family M13 J152_02926 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J152_02927 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J152_02927 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_02928 PF01266 FAD dependent oxidoreductase J152_02929 PF04235 Protein of unknown function (DUF418) J152_02930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J152_02931 PF00877 NlpC/P60 family J152_02932 PF00877 NlpC/P60 family J152_02935 PF00375 Sodium:dicarboxylate symporter family J152_02936 PF00245 Alkaline phosphatase J152_02937 PF11734 TilS substrate C-terminal domain J152_02937 PF09179 TilS substrate binding domain J152_02937 PF01171 PP-loop family J152_02938 PF02609 Exonuclease VII small subunit J152_02939 PF00348 Polyprenyl synthetase J152_02940 PF14521 Lysine-specific metallo-endopeptidase J152_02942 PF01523 Putative modulator of DNA gyrase J152_02943 PF04751 Protein of unknown function (DUF615) J152_02944 PF01523 Putative modulator of DNA gyrase J152_02946 PF13116 Protein of unknown function J152_02946 PF13502 AsmA-like C-terminal region J152_02947 PF00575 S1 RNA binding domain J152_02947 PF10150 Ribonuclease E/G family J152_02948 PF02545 Maf-like protein J152_02949 PF04402 Protein of unknown function (DUF541) J152_02952 PF02590 Predicted SPOUT methyltransferase J152_02955 PF01467 Cytidylyltransferase-like J152_02958 PF13603 Leucyl-tRNA synthetase, Domain 2 J152_02958 PF00133 tRNA synthetases class I (I, L, M and V) J152_02958 PF08264 Anticodon-binding domain of tRNA J152_02960 PF00085 Thioredoxin J152_02965 PF04070 Domain of unknown function (DUF378) J152_02966 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J152_02968 PF03466 LysR substrate binding domain J152_02968 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_02973 PF00005 ABC transporter J152_02973 PF00664 ABC transporter transmembrane region J152_02976 PF00873 AcrB/AcrD/AcrF family J152_02979 PF02321 Outer membrane efflux protein J152_02980 PF00486 Transcriptional regulatory protein, C terminal J152_02980 PF00072 Response regulator receiver domain J152_02981 PF00672 HAMP domain J152_02981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_02981 PF00512 His Kinase A (phospho-acceptor) domain J152_02982 PF00999 Sodium/hydrogen exchanger family J152_02983 PF00144 Beta-lactamase J152_02984 PF03737 Aldolase/RraA J152_02987 PF00990 Diguanylate cyclase, GGDEF domain J152_02987 PF00072 Response regulator receiver domain J152_02988 PF00849 RNA pseudouridylate synthase J152_02988 PF01479 S4 domain J152_02989 PF00563 EAL domain J152_02989 PF00990 Diguanylate cyclase, GGDEF domain J152_02989 PF08448 PAS fold J152_02990 PF03880 DbpA RNA binding domain J152_02990 PF00270 DEAD/DEAH box helicase J152_02990 PF00271 Helicase conserved C-terminal domain J152_02999 PF06029 AlkA N-terminal domain J152_02999 PF00730 HhH-GPD superfamily base excision DNA repair protein J152_03000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J152_03000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J152_03002 PF00654 Voltage gated chloride channel J152_03003 PF08240 Alcohol dehydrogenase GroES-like domain J152_03003 PF00107 Zinc-binding dehydrogenase J152_03006 PF00593 TonB dependent receptor J152_03006 PF07715 TonB-dependent Receptor Plug Domain J152_03008 PF00082 Subtilase family J152_03008 PF01483 Proprotein convertase P-domain J152_03011 PF00082 Subtilase family J152_03011 PF01483 Proprotein convertase P-domain J152_03013 PF00248 Aldo/keto reductase family J152_03014 PF07690 Major Facilitator Superfamily J152_03015 PF03466 LysR substrate binding domain J152_03015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03017 PF06719 AraC-type transcriptional regulator N-terminus J152_03017 PF12833 Helix-turn-helix domain J152_03019 PF00440 Bacterial regulatory proteins, tetR family J152_03019 PF16859 Tetracyclin repressor-like, C-terminal domain J152_03020 PF02321 Outer membrane efflux protein J152_03021 PF00873 AcrB/AcrD/AcrF family J152_03022 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_03022 PF00529 HlyD membrane-fusion protein of T1SS J152_03024 PF01475 Ferric uptake regulator family J152_03025 PF00749 tRNA synthetases class I (E and Q), catalytic domain J152_03030 PF06123 Inner membrane protein CreD J152_03032 PF00672 HAMP domain J152_03032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03032 PF00512 His Kinase A (phospho-acceptor) domain J152_03033 PF00486 Transcriptional regulatory protein, C terminal J152_03033 PF00072 Response regulator receiver domain J152_03034 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J152_03036 PF17757 UvrB interaction domain J152_03036 PF03461 TRCF domain J152_03036 PF00271 Helicase conserved C-terminal domain J152_03036 PF00270 DEAD/DEAH box helicase J152_03036 PF02559 CarD-like/TRCF domain J152_03043 PF01584 CheW-like domain J152_03043 PF01627 Hpt domain J152_03043 PF09078 CheY binding J152_03043 PF02895 Signal transducing histidine kinase, homodimeric domain J152_03043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03044 PF02203 Tar ligand binding domain homologue J152_03044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03044 PF00672 HAMP domain J152_03045 PF01584 CheW-like domain J152_03046 PF00563 EAL domain J152_03046 PF00990 Diguanylate cyclase, GGDEF domain J152_03046 PF13426 PAS domain J152_03047 PF03705 CheR methyltransferase, all-alpha domain J152_03047 PF01739 CheR methyltransferase, SAM binding domain J152_03048 PF01339 CheB methylesterase J152_03048 PF00072 Response regulator receiver domain J152_03049 PF13091 PLD-like domain J152_03050 PF05649 Peptidase family M13 J152_03050 PF01431 Peptidase family M13 J152_03052 PF00300 Histidine phosphatase superfamily (branch 1) J152_03053 PF04493 Endonuclease V J152_03055 PF05726 Pirin C-terminal cupin domain J152_03055 PF02678 Pirin J152_03058 PF05726 Pirin C-terminal cupin domain J152_03058 PF02678 Pirin J152_03059 PF13722 5TM C-terminal transporter carbon starvation CstA J152_03059 PF02554 Carbon starvation protein CstA J152_03060 PF04328 Selenoprotein, putative J152_03069 PF01527 Transposase J152_03071 PF02625 XdhC and CoxI family J152_03071 PF13478 XdhC Rossmann domain J152_03072 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J152_03072 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J152_03073 PF03450 CO dehydrogenase flavoprotein C-terminal domain J152_03073 PF00941 FAD binding domain in molybdopterin dehydrogenase J152_03074 PF00111 2Fe-2S iron-sulfur cluster binding domain J152_03074 PF10518 TAT (twin-arginine translocation) pathway signal sequence J152_03074 PF01799 [2Fe-2S] binding domain J152_03075 PF09277 Erythronolide synthase, docking J152_03075 PF00698 Acyl transferase domain J152_03075 PF08240 Alcohol dehydrogenase GroES-like domain J152_03075 PF08990 Erythronolide synthase docking J152_03075 PF16197 Ketoacyl-synthetase C-terminal extension J152_03075 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_03075 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_03075 PF00550 Phosphopantetheine attachment site J152_03075 PF14765 Polyketide synthase dehydratase J152_03075 PF08659 KR domain J152_03076 PF01590 GAF domain J152_03076 PF00563 EAL domain J152_03076 PF00990 Diguanylate cyclase, GGDEF domain J152_03076 PF00360 Phytochrome region J152_03079 PF12161 HsdM N-terminal domain J152_03079 PF02384 N-6 DNA Methylase J152_03085 PF00436 Single-strand binding protein family J152_03086 PF00348 Polyprenyl synthetase J152_03088 PF02875 Mur ligase family, glutamate ligase domain J152_03088 PF08245 Mur ligase middle domain J152_03091 PF00696 Amino acid kinase family J152_03091 PF01842 ACT domain J152_03092 PF02567 Phenazine biosynthesis-like protein J152_03093 PF02567 Phenazine biosynthesis-like protein J152_03095 PF02566 OsmC-like protein J152_03096 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J152_03096 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J152_03097 PF03652 Holliday junction resolvase J152_03098 PF02622 Uncharacterized ACR, COG1678 J152_03099 PF13673 Acetyltransferase (GNAT) domain J152_03099 PF00958 GMP synthase C terminal domain J152_03099 PF00117 Glutamine amidotransferase class-I J152_03099 PF13302 Acetyltransferase (GNAT) domain J152_03099 PF03352 Methyladenine glycosylase J152_03102 PF03211 Pectate lyase J152_03103 PF00437 Type II/IV secretion system protein J152_03104 PF00437 Type II/IV secretion system protein J152_03105 PF01168 Alanine racemase, N-terminal domain J152_03106 PF14748 Pyrroline-5-carboxylate reductase dimerisation J152_03106 PF03807 NADP oxidoreductase coenzyme F420-dependent J152_03108 PF01551 Peptidase family M23 J152_03112 PF01965 DJ-1/PfpI family J152_03114 PF02082 Transcriptional regulator J152_03115 PF01458 Uncharacterized protein family (UPF0051) J152_03116 PF00005 ABC transporter J152_03117 PF01458 Uncharacterized protein family (UPF0051) J152_03118 PF00266 Aminotransferase class-V J152_03120 PF00355 Rieske [2Fe-2S] domain J152_03121 PF00593 TonB dependent receptor J152_03121 PF07715 TonB-dependent Receptor Plug Domain J152_03122 PF18331 PKHD-type hydroxylase C-terminal domain J152_03122 PF13640 2OG-Fe(II) oxygenase superfamily J152_03127 PF02424 ApbE family J152_03128 PF00258 Flavodoxin J152_03128 PF00175 Oxidoreductase NAD-binding domain J152_03128 PF00667 FAD binding domain J152_03132 PF01546 Peptidase family M20/M25/M40 J152_03132 PF07687 Peptidase dimerisation domain J152_03134 PF01636 Phosphotransferase enzyme family J152_03135 PF00483 Nucleotidyl transferase J152_03136 PF00308 Bacterial dnaA protein J152_03137 PF01594 AI-2E family transporter J152_03139 PF02769 AIR synthase related protein, C-terminal domain J152_03139 PF00586 AIR synthase related protein, N-terminal domain J152_03141 PF00551 Formyl transferase J152_03145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J152_03146 PF01722 BolA-like protein J152_03147 PF00571 CBS domain J152_03147 PF01380 SIS domain J152_03150 PF03968 OstA-like protein J152_03151 PF00005 ABC transporter J152_03152 PF00309 Sigma-54 factor, Activator interacting domain (AID) J152_03152 PF04552 Sigma-54, DNA binding domain J152_03152 PF04963 Sigma-54 factor, core binding domain J152_03153 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J152_03154 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J152_03155 PF02603 HPr Serine kinase N terminus J152_03155 PF07475 HPr Serine kinase C-terminal domain J152_03156 PF03668 P-loop ATPase protein family J152_03158 PF00381 PTS HPr component phosphorylation site J152_03159 PF00391 PEP-utilising enzyme, mobile domain J152_03159 PF02896 PEP-utilising enzyme, TIM barrel domain J152_03159 PF05524 PEP-utilising enzyme, N-terminal J152_03160 PF03448 MgtE intracellular N domain J152_03160 PF00571 CBS domain J152_03160 PF01769 Divalent cation transporter J152_03161 PF00756 Putative esterase J152_03162 PF02322 Cytochrome bd terminal oxidase subunit II J152_03163 PF01654 Cytochrome bd terminal oxidase subunit I J152_03165 PF00324 Amino acid permease J152_03166 PF00544 Pectate lyase J152_03167 PF00561 alpha/beta hydrolase fold J152_03168 PF00196 Bacterial regulatory proteins, luxR family J152_03169 PF00324 Amino acid permease J152_03174 PF12706 Beta-lactamase superfamily domain J152_03175 PF04820 Tryptophan halogenase J152_03180 PF00376 MerR family regulatory protein J152_03180 PF09278 MerR, DNA binding J152_03181 PF07690 Major Facilitator Superfamily J152_03183 PF03738 Glutathionylspermidine synthase preATP-grasp J152_03188 PF04012 PspA/IM30 family J152_03190 PF01243 Pyridoxamine 5'-phosphate oxidase J152_03190 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J152_03191 PF01202 Shikimate kinase J152_03192 PF01761 3-dehydroquinate synthase J152_03194 PF01208 Uroporphyrinogen decarboxylase (URO-D) J152_03207 PF02954 Bacterial regulatory protein, Fis family J152_03207 PF00158 Sigma-54 interaction domain J152_03207 PF01590 GAF domain J152_03208 PF07690 Major Facilitator Superfamily J152_03209 PF17149 Periplasmic sensor domain found in signal transduction proteins J152_03209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03209 PF00672 HAMP domain J152_03209 PF00072 Response regulator receiver domain J152_03209 PF01627 Hpt domain J152_03209 PF00512 His Kinase A (phospho-acceptor) domain J152_03210 PF00672 HAMP domain J152_03210 PF00072 Response regulator receiver domain J152_03210 PF01627 Hpt domain J152_03210 PF00512 His Kinase A (phospho-acceptor) domain J152_03210 PF17149 Periplasmic sensor domain found in signal transduction proteins J152_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03212 PF00072 Response regulator receiver domain J152_03212 PF01627 Hpt domain J152_03212 PF00512 His Kinase A (phospho-acceptor) domain J152_03212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03213 PF04264 YceI-like domain J152_03217 PF03313 Serine dehydratase alpha chain J152_03217 PF03315 Serine dehydratase beta chain J152_03218 PF12697 Alpha/beta hydrolase family J152_03219 PF00696 Amino acid kinase family J152_03219 PF00742 Homoserine dehydrogenase J152_03219 PF03447 Homoserine dehydrogenase, NAD binding domain J152_03220 PF01053 Cys/Met metabolism PLP-dependent enzyme J152_03221 PF00561 alpha/beta hydrolase fold J152_03223 PF01476 LysM domain J152_03223 PF01551 Peptidase family M23 J152_03223 PF08525 Opacity-associated protein A N-terminal motif J152_03224 PF16658 Class II release factor RF3, C-terminal domain J152_03224 PF00009 Elongation factor Tu GTP binding domain J152_03225 PF03006 Haemolysin-III related J152_03226 PF05170 AsmA family J152_03227 PF00478 IMP dehydrogenase / GMP reductase domain J152_03227 PF00571 CBS domain J152_03228 PF00535 Glycosyl transferase family 2 J152_03229 PF00912 Transglycosylase J152_03230 PF01430 Hsp33 protein J152_03232 PF00593 TonB dependent receptor J152_03232 PF07715 TonB-dependent Receptor Plug Domain J152_03234 PF00440 Bacterial regulatory proteins, tetR family J152_03235 PF00561 alpha/beta hydrolase fold J152_03236 PF09317 Domain of unknown function (DUF1974) J152_03236 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J152_03236 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J152_03241 PF01597 Glycine cleavage H-protein J152_03242 PF01571 Aminomethyltransferase folate-binding domain J152_03242 PF08669 Glycine cleavage T-protein C-terminal barrel domain J152_03244 PF01145 SPFH domain / Band 7 family J152_03244 PF16200 C-terminal region of band_7 J152_03245 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J152_03246 PF03819 MazG nucleotide pyrophosphohydrolase domain J152_03247 PF00459 Inositol monophosphatase family J152_03248 PF00293 NUDIX domain J152_03249 PF00202 Aminotransferase class-III J152_03250 PF04452 RNA methyltransferase J152_03251 PF02685 Glucokinase J152_03254 PF01476 LysM domain J152_03254 PF00704 Glycosyl hydrolases family 18 J152_03255 PF00728 Glycosyl hydrolase family 20, catalytic domain J152_03255 PF02838 Glycosyl hydrolase family 20, domain 2 J152_03255 PF07691 PA14 domain J152_03257 PF07691 PA14 domain J152_03257 PF01915 Glycosyl hydrolase family 3 C-terminal domain J152_03257 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_03257 PF14310 Fibronectin type III-like domain J152_03259 PF01301 Glycosyl hydrolases family 35 J152_03260 PF13520 Amino acid permease J152_03262 PF11975 Family 4 glycosyl hydrolase C-terminal domain J152_03262 PF02056 Family 4 glycosyl hydrolase J152_03264 PF17678 Glycosyl hydrolase family 92 N-terminal domain J152_03264 PF07971 Glycosyl hydrolase family 92 J152_03265 PF01301 Glycosyl hydrolases family 35 J152_03271 PF03932 CutC family J152_03272 PF01112 Asparaginase J152_03273 PF13302 Acetyltransferase (GNAT) domain J152_03276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03276 PF01584 CheW-like domain J152_03276 PF00072 Response regulator receiver domain J152_03276 PF01627 Hpt domain J152_03277 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03277 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J152_03279 PF00072 Response regulator receiver domain J152_03280 PF00072 Response regulator receiver domain J152_03281 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J152_03281 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J152_03283 PF03747 ADP-ribosylglycohydrolase J152_03284 PF00814 Glycoprotease family J152_03285 PF04851 Type III restriction enzyme, res subunit J152_03285 PF13307 Helicase C-terminal domain J152_03287 PF14814 Bifunctional transglycosylase second domain J152_03287 PF00912 Transglycosylase J152_03287 PF00905 Penicillin binding protein transpeptidase domain J152_03288 PF00535 Glycosyl transferase family 2 J152_03290 PF04607 Region found in RelA / SpoT proteins J152_03290 PF13291 ACT domain J152_03290 PF02824 TGS domain J152_03291 PF12706 Beta-lactamase superfamily domain J152_03292 PF03070 TENA/THI-4/PQQC family J152_03293 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J152_03294 PF04055 Radical SAM superfamily J152_03294 PF13186 Iron-sulfur cluster-binding domain J152_03297 PF02685 Glucokinase J152_03299 PF00271 Helicase conserved C-terminal domain J152_03299 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J152_03299 PF11898 Domain of unknown function (DUF3418) J152_03299 PF00270 DEAD/DEAH box helicase J152_03299 PF04408 Helicase associated domain (HA2) J152_03300 PF00210 Ferritin-like domain J152_03301 PF00270 DEAD/DEAH box helicase J152_03301 PF09382 RQC domain J152_03301 PF16124 RecQ zinc-binding J152_03301 PF00570 HRDC domain J152_03301 PF00271 Helicase conserved C-terminal domain J152_03308 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03308 PF02203 Tar ligand binding domain homologue J152_03308 PF00672 HAMP domain J152_03312 PF13426 PAS domain J152_03312 PF07536 HWE histidine kinase J152_03312 PF13581 Histidine kinase-like ATPase domain J152_03313 PF06508 Queuosine biosynthesis protein QueC J152_03315 PF04055 Radical SAM superfamily J152_03317 PF00691 OmpA family J152_03318 PF07676 WD40-like Beta Propeller Repeat J152_03318 PF04052 TolB amino-terminal domain J152_03320 PF02472 Biopolymer transport protein ExbD/TolR J152_03321 PF01618 MotA/TolQ/ExbB proton channel family J152_03322 PF03061 Thioesterase superfamily J152_03323 PF17864 RuvB AAA lid domain J152_03323 PF05491 RuvB C-terminal winged helix domain J152_03323 PF05496 Holliday junction DNA helicase RuvB P-loop domain J152_03325 PF02705 K+ potassium transporter J152_03326 PF07499 RuvA, C-terminal domain J152_03326 PF01330 RuvA N terminal domain J152_03327 PF02075 Crossover junction endodeoxyribonuclease RuvC J152_03328 PF01709 Transcriptional regulator J152_03331 PF00152 tRNA synthetases class II (D, K and N) J152_03331 PF01336 OB-fold nucleic acid binding domain J152_03331 PF02938 GAD domain J152_03334 PF07690 Major Facilitator Superfamily J152_03337 PF04185 Phosphoesterase family J152_03337 PF05506 Domain of unknown function (DUF756) J152_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03340 PF03466 LysR substrate binding domain J152_03342 PF12848 ABC transporter J152_03342 PF00005 ABC transporter J152_03343 PF00593 TonB dependent receptor J152_03343 PF07715 TonB-dependent Receptor Plug Domain J152_03345 PF07715 TonB-dependent Receptor Plug Domain J152_03345 PF00593 TonB dependent receptor J152_03346 PF00593 TonB dependent receptor J152_03346 PF07715 TonB-dependent Receptor Plug Domain J152_03347 PF00067 Cytochrome P450 J152_03348 PF02254 TrkA-N domain J152_03348 PF00999 Sodium/hydrogen exchanger family J152_03353 PF00593 TonB dependent receptor J152_03353 PF07660 Secretin and TonB N terminus short domain J152_03353 PF07715 TonB-dependent Receptor Plug Domain J152_03355 PF06276 Ferric iron reductase FhuF-like transporter J152_03355 PF04183 IucA / IucC family J152_03356 PF07690 Major Facilitator Superfamily J152_03358 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J152_03358 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J152_03361 PF02654 Cobalamin-5-phosphate synthase J152_03363 PF02277 Phosphoribosyltransferase J152_03364 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J152_03365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J152_03365 PF07685 CobB/CobQ-like glutamine amidotransferase domain J152_03366 PF00155 Aminotransferase class I and II J152_03368 PF03186 CobD/Cbib protein J152_03368 PF17113 Regulatory signalling modulator protein AmpE J152_03369 PF12557 Cob(I)alamin adenosyltransferase N terminal J152_03369 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J152_03372 PF00593 TonB dependent receptor J152_03372 PF07715 TonB-dependent Receptor Plug Domain J152_03374 PF10431 C-terminal, D2-small domain, of ClpB protein J152_03374 PF17871 AAA lid domain J152_03374 PF07724 AAA domain (Cdc48 subfamily) J152_03374 PF02861 Clp amino terminal domain, pathogenicity island component J152_03374 PF00004 ATPase family associated with various cellular activities (AAA) J152_03375 PF00005 ABC transporter J152_03376 PF00528 Binding-protein-dependent transport system inner membrane component J152_03377 PF09084 NMT1/THI5 like J152_03378 PF00248 Aldo/keto reductase family J152_03380 PF07715 TonB-dependent Receptor Plug Domain J152_03380 PF00593 TonB dependent receptor J152_03381 PF01541 GIY-YIG catalytic domain J152_03388 PF07715 TonB-dependent Receptor Plug Domain J152_03388 PF00593 TonB dependent receptor J152_03389 PF02358 Trehalose-phosphatase J152_03390 PF00723 Glycosyl hydrolases family 15 J152_03391 PF00982 Glycosyltransferase family 20 J152_03392 PF01011 PQQ enzyme repeat J152_03393 PF02203 Tar ligand binding domain homologue J152_03393 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03393 PF00672 HAMP domain J152_03394 PF04134 Protein of unknown function, DUF393 J152_03397 PF00849 RNA pseudouridylate synthase J152_03398 PF13525 Outer membrane lipoprotein J152_03400 PF00795 Carbon-nitrogen hydrolase J152_03400 PF02540 NAD synthase J152_03402 PF01527 Transposase J152_03406 PF13406 Transglycosylase SLT domain J152_03407 PF13700 Domain of unknown function (DUF4158) J152_03407 PF01526 Tn3 transposase DDE domain J152_03411 PF01129 NAD:arginine ADP-ribosyltransferase J152_03416 PF00549 CoA-ligase J152_03416 PF02629 CoA binding domain J152_03417 PF08442 ATP-grasp domain J152_03417 PF00549 CoA-ligase J152_03418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03418 PF00512 His Kinase A (phospho-acceptor) domain J152_03419 PF02954 Bacterial regulatory protein, Fis family J152_03419 PF00158 Sigma-54 interaction domain J152_03419 PF00072 Response regulator receiver domain J152_03421 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J152_03421 PF00437 Type II/IV secretion system protein J152_03422 PF00437 Type II/IV secretion system protein J152_03422 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J152_03423 PF00437 Type II/IV secretion system protein J152_03423 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J152_03424 PF00114 Pilin (bacterial filament) J152_03424 PF07963 Prokaryotic N-terminal methylation motif J152_03425 PF07963 Prokaryotic N-terminal methylation motif J152_03425 PF00114 Pilin (bacterial filament) J152_03426 PF00482 Type II secretion system (T2SS), protein F J152_03427 PF06750 Bacterial Peptidase A24 N-terminal domain J152_03427 PF01478 Type IV leader peptidase family J152_03428 PF01121 Dephospho-CoA kinase J152_03431 PF01527 Transposase J152_03432 PF13276 HTH-like domain J152_03432 PF00665 Integrase core domain J152_03432 PF13333 Integrase core domain J152_03433 PF16736 Single Cache-like J152_03433 PF00989 PAS fold J152_03433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03433 PF00512 His Kinase A (phospho-acceptor) domain J152_03434 PF00072 Response regulator receiver domain J152_03434 PF00486 Transcriptional regulatory protein, C terminal J152_03436 PF08443 RimK-like ATP-grasp domain J152_03436 PF18030 RimK PreATP-grasp domain J152_03437 PF00128 Alpha amylase, catalytic domain J152_03437 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J152_03450 PF04002 RadC-like JAB domain J152_03455 PF00072 Response regulator receiver domain J152_03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03455 PF13426 PAS domain J152_03456 PF13426 PAS domain J152_03456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03456 PF00072 Response regulator receiver domain J152_03462 PF01527 Transposase J152_03471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03471 PF00512 His Kinase A (phospho-acceptor) domain J152_03471 PF08448 PAS fold J152_03471 PF13188 PAS domain J152_03471 PF00072 Response regulator receiver domain J152_03475 PF13676 TIR domain J152_03478 PF00657 GDSL-like Lipase/Acylhydrolase J152_03478 PF03797 Autotransporter beta-domain J152_03480 PF05690 Thiazole biosynthesis protein ThiG J152_03481 PF02390 Putative methyltransferase J152_03482 PF02080 TrkA-C domain J152_03482 PF03600 Citrate transporter J152_03485 PF01557 Fumarylacetoacetate (FAA) hydrolase family J152_03486 PF01741 Large-conductance mechanosensitive channel, MscL J152_03488 PF00356 Bacterial regulatory proteins, lacI family J152_03490 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J152_03490 PF00703 Glycosyl hydrolases family 2 J152_03490 PF02837 Glycosyl hydrolases family 2, sugar binding domain J152_03491 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J152_03491 PF10566 Glycoside hydrolase 97 J152_03491 PF14508 Glycosyl-hydrolase 97 N-terminal J152_03493 PF00135 Carboxylesterase family J152_03494 PF00588 SpoU rRNA Methylase family J152_03494 PF08032 RNA 2'-O ribose methyltransferase substrate binding J152_03496 PF01433 Peptidase family M1 domain J152_03496 PF11838 ERAP1-like C-terminal domain J152_03499 PF01527 Transposase J152_03505 PF00873 AcrB/AcrD/AcrF family J152_03506 PF00529 HlyD membrane-fusion protein of T1SS J152_03506 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_03507 PF00009 Elongation factor Tu GTP binding domain J152_03508 PF01507 Phosphoadenosine phosphosulfate reductase family J152_03509 PF00175 Oxidoreductase NAD-binding domain J152_03509 PF00667 FAD binding domain J152_03509 PF00258 Flavodoxin J152_03510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J152_03510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J152_03511 PF01507 Phosphoadenosine phosphosulfate reductase family J152_03515 PF01627 Hpt domain J152_03515 PF00072 Response regulator receiver domain J152_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03515 PF00512 His Kinase A (phospho-acceptor) domain J152_03517 PF03466 LysR substrate binding domain J152_03517 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03518 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J152_03518 PF14824 Sirohaem biosynthesis protein central J152_03518 PF10414 Sirohaem synthase dimerisation region J152_03519 PF00291 Pyridoxal-phosphate dependent enzyme J152_03521 PF01661 Macro domain J152_03522 PF00274 Fructose-bisphosphate aldolase class-I J152_03523 PF00224 Pyruvate kinase, barrel domain J152_03523 PF02887 Pyruvate kinase, alpha/beta domain J152_03525 PF00162 Phosphoglycerate kinase J152_03530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J152_03530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J152_03532 PF03922 OmpW family J152_03533 PF03922 OmpW family J152_03535 PF04273 Putative phosphatase (DUF442) J152_03535 PF00753 Metallo-beta-lactamase superfamily J152_03537 PF00528 Binding-protein-dependent transport system inner membrane component J152_03538 PF03459 TOBE domain J152_03538 PF00005 ABC transporter J152_03545 PF03734 L,D-transpeptidase catalytic domain J152_03545 PF01476 LysM domain J152_03546 PF04225 Opacity-associated protein A LysM-like domain J152_03546 PF01551 Peptidase family M23 J152_03548 PF07715 TonB-dependent Receptor Plug Domain J152_03548 PF00593 TonB dependent receptor J152_03549 PF12146 Serine aminopeptidase, S33 J152_03550 PF02779 Transketolase, pyrimidine binding domain J152_03550 PF02780 Transketolase, C-terminal domain J152_03550 PF00456 Transketolase, thiamine diphosphate binding domain J152_03551 PF00375 Sodium:dicarboxylate symporter family J152_03553 PF00092 von Willebrand factor type A domain J152_03553 PF07584 Aerotolerance regulator N-terminal J152_03557 PF17863 AAA lid domain J152_03557 PF07726 ATPase family associated with various cellular activities (AAA) J152_03559 PF07660 Secretin and TonB N terminus short domain J152_03559 PF00263 Bacterial type II and III secretion system protein J152_03559 PF11741 AMIN domain J152_03559 PF03958 Bacterial type II/III secretion system short domain J152_03564 PF00905 Penicillin binding protein transpeptidase domain J152_03564 PF17092 Penicillin-binding protein OB-like domain J152_03564 PF00912 Transglycosylase J152_03567 PF00285 Citrate synthase, C-terminal domain J152_03568 PF01197 Ribosomal protein L31 J152_03569 PF01156 Inosine-uridine preferring nucleoside hydrolase J152_03570 PF17191 RecG wedge domain J152_03570 PF00271 Helicase conserved C-terminal domain J152_03570 PF00270 DEAD/DEAH box helicase J152_03571 PF01042 Endoribonuclease L-PSP J152_03572 PF02824 TGS domain J152_03572 PF04607 Region found in RelA / SpoT proteins J152_03572 PF13291 ACT domain J152_03573 PF01192 RNA polymerase Rpb6 J152_03574 PF00625 Guanylate kinase J152_03575 PF08340 Domain of unknown function (DUF1732) J152_03575 PF03755 YicC-like family, N-terminal region J152_03576 PF03725 3' exoribonuclease family, domain 2 J152_03576 PF01138 3' exoribonuclease family, domain 1 J152_03578 PF01725 Ham1 family J152_03579 PF06969 HemN C-terminal domain J152_03579 PF04055 Radical SAM superfamily J152_03582 PF00557 Metallopeptidase family M24 J152_03584 PF05195 Aminopeptidase P, N-terminal domain J152_03584 PF00557 Metallopeptidase family M24 J152_03585 PF03695 Uncharacterised protein family (UPF0149) J152_03587 PF05164 Cell division protein ZapA J152_03589 PF01812 5-formyltetrahydrofolate cyclo-ligase family J152_03591 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J152_03593 PF13369 Transglutaminase-like superfamily J152_03594 PF00301 Rubredoxin J152_03595 PF02581 Thiamine monophosphate synthase J152_03598 PF00202 Aminotransferase class-III J152_03599 PF00196 Bacterial regulatory proteins, luxR family J152_03599 PF17874 MalT-like TPR region J152_03600 PF00127 Copper binding proteins, plastocyanin/azurin family J152_03601 PF00155 Aminotransferase class I and II J152_03603 PF00034 Cytochrome c J152_03603 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J152_03604 PF01593 Flavin containing amine oxidoreductase J152_03607 PF00202 Aminotransferase class-III J152_03608 PF00520 Ion transport protein J152_03608 PF00027 Cyclic nucleotide-binding domain J152_03611 PF01569 PAP2 superfamily J152_03612 PF01062 Bestrophin, RFP-TM, chloride channel J152_03614 PF01225 Mur ligase family, catalytic domain J152_03614 PF02875 Mur ligase family, glutamate ligase domain J152_03614 PF08245 Mur ligase middle domain J152_03616 PF00365 Phosphofructokinase J152_03618 PF03030 Inorganic H+ pyrophosphatase J152_03620 PF00719 Inorganic pyrophosphatase J152_03622 PF07715 TonB-dependent Receptor Plug Domain J152_03622 PF00593 TonB dependent receptor J152_03623 PF12833 Helix-turn-helix domain J152_03624 PF18500 CadC C-terminal domain 1 J152_03624 PF00486 Transcriptional regulatory protein, C terminal J152_03625 PF13667 ThiC-associated domain J152_03625 PF01964 Radical SAM ThiC family J152_03627 PF07715 TonB-dependent Receptor Plug Domain J152_03627 PF00593 TonB dependent receptor J152_03628 PF00672 HAMP domain J152_03628 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03628 PF02203 Tar ligand binding domain homologue J152_03630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J152_03630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J152_03631 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J152_03631 PF00205 Thiamine pyrophosphate enzyme, central domain J152_03631 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J152_03633 PF00291 Pyridoxal-phosphate dependent enzyme J152_03634 PF00682 HMGL-like J152_03634 PF08502 LeuA allosteric (dimerisation) domain J152_03635 PF00180 Isocitrate/isopropylmalate dehydrogenase J152_03636 PF00694 Aconitase C-terminal domain J152_03637 PF00330 Aconitase family (aconitate hydratase) J152_03638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03639 PF00990 Diguanylate cyclase, GGDEF domain J152_03639 PF17151 Periplasmic sensor domain J152_03642 PF02321 Outer membrane efflux protein J152_03643 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J152_03644 PF03279 Bacterial lipid A biosynthesis acyltransferase J152_03649 PF00390 Malic enzyme, N-terminal domain J152_03649 PF03949 Malic enzyme, NAD binding domain J152_03649 PF01515 Phosphate acetyl/butaryl transferase J152_03650 PF00375 Sodium:dicarboxylate symporter family J152_03652 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03652 PF02743 Cache domain J152_03652 PF00512 His Kinase A (phospho-acceptor) domain J152_03653 PF07690 Major Facilitator Superfamily J152_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03655 PF03466 LysR substrate binding domain J152_03656 PF00248 Aldo/keto reductase family J152_03660 PF00072 Response regulator receiver domain J152_03660 PF00196 Bacterial regulatory proteins, luxR family J152_03662 PF00512 His Kinase A (phospho-acceptor) domain J152_03662 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03662 PF08521 Two-component sensor kinase N-terminal J152_03663 PF00486 Transcriptional regulatory protein, C terminal J152_03663 PF00072 Response regulator receiver domain J152_03665 PF03600 Citrate transporter J152_03667 PF00106 short chain dehydrogenase J152_03668 PF00356 Bacterial regulatory proteins, lacI family J152_03671 PF00128 Alpha amylase, catalytic domain J152_03674 PF03193 RsgA GTPase J152_03678 PF00593 TonB dependent receptor J152_03678 PF07715 TonB-dependent Receptor Plug Domain J152_03679 PF01522 Polysaccharide deacetylase J152_03680 PF00462 Glutaredoxin J152_03683 PF01527 Transposase J152_03688 PF02645 Uncharacterised protein, DegV family COG1307 J152_03689 PF01327 Polypeptide deformylase J152_03690 PF03960 ArsC family J152_03693 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J152_03694 PF01270 Glycosyl hydrolases family 8 J152_03695 PF03170 Bacterial cellulose synthase subunit J152_03696 PF03552 Cellulose synthase J152_03696 PF00535 Glycosyl transferase family 2 J152_03696 PF07238 PilZ domain J152_03700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J152_03700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J152_03708 PF07715 TonB-dependent Receptor Plug Domain J152_03708 PF00593 TonB dependent receptor J152_03710 PF07702 UTRA domain J152_03710 PF00392 Bacterial regulatory proteins, gntR family J152_03712 PF00263 Bacterial type II and III secretion system protein J152_03712 PF03958 Bacterial type II/III secretion system short domain J152_03714 PF10741 Type II secretion system (T2SS), protein M subtype b J152_03715 PF05137 Fimbrial assembly protein (PilN) J152_03716 PF03934 Type II secretion system (T2SS), protein K J152_03718 PF07963 Prokaryotic N-terminal methylation motif J152_03719 PF12019 Type II transport protein GspH J152_03720 PF08334 Type II secretion system (T2SS), protein G J152_03721 PF00482 Type II secretion system (T2SS), protein F J152_03722 PF00437 Type II/IV secretion system protein J152_03722 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J152_03723 PF00082 Subtilase family J152_03723 PF04151 Bacterial pre-peptidase C-terminal domain J152_03724 PF05662 Coiled stalk of trimeric autotransporter adhesin J152_03724 PF05658 Head domain of trimeric autotransporter adhesin J152_03724 PF03895 YadA-like membrane anchor domain J152_03724 PF13018 Extended Signal Peptide of Type V secretion system J152_03725 PF04151 Bacterial pre-peptidase C-terminal domain J152_03725 PF00082 Subtilase family J152_03726 PF03895 YadA-like membrane anchor domain J152_03726 PF05662 Coiled stalk of trimeric autotransporter adhesin J152_03726 PF05658 Head domain of trimeric autotransporter adhesin J152_03726 PF13018 Extended Signal Peptide of Type V secretion system J152_03727 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J152_03727 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J152_03727 PF02769 AIR synthase related protein, C-terminal domain J152_03728 PF10411 Disulfide bond isomerase protein N-terminus J152_03728 PF13098 Thioredoxin-like domain J152_03729 PF00589 Phage integrase family J152_03729 PF02899 Phage integrase, N-terminal SAM-like domain J152_03732 PF03739 Lipopolysaccharide export system permease LptF/LptG J152_03734 PF02789 Cytosol aminopeptidase family, N-terminal domain J152_03734 PF00883 Cytosol aminopeptidase family, catalytic domain J152_03737 PF08264 Anticodon-binding domain of tRNA J152_03737 PF00133 tRNA synthetases class I (I, L, M and V) J152_03737 PF10458 Valyl tRNA synthetase tRNA binding arm J152_03738 PF00593 TonB dependent receptor J152_03738 PF07715 TonB-dependent Receptor Plug Domain J152_03739 PF01464 Transglycosylase SLT domain J152_03739 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J152_03740 PF00544 Pectate lyase J152_03743 PF01066 CDP-alcohol phosphatidyltransferase J152_03745 PF03129 Anticodon binding domain J152_03745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J152_03745 PF04073 Aminoacyl-tRNA editing domain J152_03746 PF00816 H-NS histone family J152_03748 PF02405 Permease MlaE J152_03749 PF00005 ABC transporter J152_03750 PF03886 ABC-type transport auxiliary lipoprotein component J152_03750 PF02470 MlaD protein J152_03754 PF05045 Rhamnan synthesis protein F J152_03754 PF14307 Glycosyltransferase WbsX J152_03755 PF01144 Coenzyme A transferase J152_03756 PF01144 Coenzyme A transferase J152_03757 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J152_03757 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J152_03757 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J152_03757 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J152_03758 PF00483 Nucleotidyl transferase J152_03758 PF01050 Mannose-6-phosphate isomerase J152_03759 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J152_03759 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J152_03759 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J152_03760 PF04321 RmlD substrate binding domain J152_03761 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J152_03762 PF00483 Nucleotidyl transferase J152_03763 PF16363 GDP-mannose 4,6 dehydratase J152_03764 PF01012 Electron transfer flavoprotein domain J152_03765 PF00766 Electron transfer flavoprotein FAD-binding domain J152_03765 PF01012 Electron transfer flavoprotein domain J152_03767 PF01040 UbiA prenyltransferase family J152_03768 PF01565 FAD binding domain J152_03768 PF04030 D-arabinono-1,4-lactone oxidase J152_03769 PF00106 short chain dehydrogenase J152_03771 PF01370 NAD dependent epimerase/dehydratase family J152_03772 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_03772 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J152_03777 PF00535 Glycosyl transferase family 2 J152_03779 PF00005 ABC transporter J152_03779 PF14524 Wzt C-terminal domain J152_03781 PF01053 Cys/Met metabolism PLP-dependent enzyme J152_03782 PF00571 CBS domain J152_03782 PF00291 Pyridoxal-phosphate dependent enzyme J152_03786 PF00437 Type II/IV secretion system protein J152_03787 PF02798 Glutathione S-transferase, N-terminal domain J152_03787 PF14497 Glutathione S-transferase, C-terminal domain J152_03789 PF00270 DEAD/DEAH box helicase J152_03789 PF00271 Helicase conserved C-terminal domain J152_03792 PF00593 TonB dependent receptor J152_03792 PF07715 TonB-dependent Receptor Plug Domain J152_03793 PF01242 6-pyruvoyl tetrahydropterin synthase J152_03796 PF13185 GAF domain J152_03798 PF00756 Putative esterase J152_03799 PF00593 TonB dependent receptor J152_03799 PF07715 TonB-dependent Receptor Plug Domain J152_03800 PF13419 Haloacid dehalogenase-like hydrolase J152_03801 PF00817 impB/mucB/samB family J152_03801 PF11799 impB/mucB/samB family C-terminal domain J152_03802 PF07977 FabA-like domain J152_03803 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_03803 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_03805 PF01432 Peptidase family M3 J152_03808 PF07731 Multicopper oxidase J152_03808 PF00394 Multicopper oxidase J152_03808 PF07732 Multicopper oxidase J152_03809 PF05275 Copper resistance protein B precursor (CopB) J152_03810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J152_03816 PF01380 SIS domain J152_03817 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_03818 PF12704 MacB-like periplasmic core domain J152_03818 PF02687 FtsX-like permease family J152_03818 PF00005 ABC transporter J152_03819 PF02687 FtsX-like permease family J152_03819 PF00005 ABC transporter J152_03819 PF12704 MacB-like periplasmic core domain J152_03820 PF02687 FtsX-like permease family J152_03820 PF12704 MacB-like periplasmic core domain J152_03822 PF00072 Response regulator receiver domain J152_03822 PF00158 Sigma-54 interaction domain J152_03823 PF00132 Bacterial transferase hexapeptide (six repeats) J152_03823 PF14602 Hexapeptide repeat of succinyl-transferase J152_03823 PF12804 MobA-like NTP transferase domain J152_03826 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J152_03826 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J152_03827 PF02874 ATP synthase alpha/beta family, beta-barrel domain J152_03827 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J152_03828 PF00231 ATP synthase J152_03829 PF02874 ATP synthase alpha/beta family, beta-barrel domain J152_03829 PF00306 ATP synthase alpha/beta chain, C terminal domain J152_03829 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J152_03830 PF00213 ATP synthase delta (OSCP) subunit J152_03831 PF00430 ATP synthase B/B' CF(0) J152_03832 PF00137 ATP synthase subunit C J152_03833 PF00119 ATP synthase A chain J152_03837 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_03837 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J152_03839 PF02817 e3 binding domain J152_03839 PF00364 Biotin-requiring enzyme J152_03839 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J152_03845 PF03180 NLPA lipoprotein J152_03846 PF00528 Binding-protein-dependent transport system inner membrane component J152_03847 PF00005 ABC transporter J152_03847 PF09383 NIL domain J152_03848 PF00892 EamA-like transporter family J152_03849 PF04461 Protein of unknown function (DUF520) J152_03851 PF00072 Response regulator receiver domain J152_03851 PF00989 PAS fold J152_03851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03851 PF18415 Histidine kinase receptor ArcB trans-membrane domain J152_03851 PF01627 Hpt domain J152_03851 PF00512 His Kinase A (phospho-acceptor) domain J152_03855 PF13419 Haloacid dehalogenase-like hydrolase J152_03856 PF01479 S4 domain J152_03856 PF00849 RNA pseudouridylate synthase J152_03857 PF05175 Methyltransferase small domain J152_03857 PF08468 Methyltransferase small domain N-terminal J152_03859 PF07995 Glucose / Sorbosone dehydrogenase J152_03861 PF00989 PAS fold J152_03861 PF00512 His Kinase A (phospho-acceptor) domain J152_03861 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03865 PF00842 Alanine racemase, C-terminal domain J152_03865 PF01168 Alanine racemase, N-terminal domain J152_03866 PF01266 FAD dependent oxidoreductase J152_03867 PF01037 Lrp/AsnC ligand binding domain J152_03869 PF01641 SelR domain J152_03871 PF01618 MotA/TolQ/ExbB proton channel family J152_03872 PF00691 OmpA family J152_03872 PF13677 Membrane MotB of proton-channel complex MotA/MotB J152_03877 PF01061 ABC-2 type transporter J152_03878 PF00005 ABC transporter J152_03879 PF00999 Sodium/hydrogen exchanger family J152_03880 PF02469 Fasciclin domain J152_03881 PF03167 Uracil DNA glycosylase superfamily J152_03883 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J152_03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03885 PF03466 LysR substrate binding domain J152_03886 PF03358 NADPH-dependent FMN reductase J152_03887 PF00248 Aldo/keto reductase family J152_03889 PF05649 Peptidase family M13 J152_03889 PF01431 Peptidase family M13 J152_03893 PF13520 Amino acid permease J152_03895 PF00072 Response regulator receiver domain J152_03895 PF04397 LytTr DNA-binding domain J152_03896 PF02743 Cache domain J152_03896 PF00672 HAMP domain J152_03896 PF06580 Histidine kinase J152_03896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_03899 PF05974 Domain of unknown function (DUF892) J152_03900 PF05067 Manganese containing catalase J152_03903 PF08448 PAS fold J152_03903 PF03705 CheR methyltransferase, all-alpha domain J152_03903 PF01339 CheB methylesterase J152_03903 PF01739 CheR methyltransferase, SAM binding domain J152_03906 PF00158 Sigma-54 interaction domain J152_03906 PF02954 Bacterial regulatory protein, Fis family J152_03906 PF00072 Response regulator receiver domain J152_03908 PF01654 Cytochrome bd terminal oxidase subunit I J152_03909 PF02322 Cytochrome bd terminal oxidase subunit II J152_03913 PF16363 GDP-mannose 4,6 dehydratase J152_03915 PF03275 UDP-galactopyranose mutase J152_03917 PF00005 ABC transporter J152_03917 PF00664 ABC transporter transmembrane region J152_03920 PF00107 Zinc-binding dehydrogenase J152_03920 PF13823 Alcohol dehydrogenase GroES-associated J152_03920 PF08240 Alcohol dehydrogenase GroES-like domain J152_03929 PF00593 TonB dependent receptor J152_03929 PF07715 TonB-dependent Receptor Plug Domain J152_03932 PF00005 ABC transporter J152_03934 PF03466 LysR substrate binding domain J152_03934 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03935 PF01042 Endoribonuclease L-PSP J152_03937 PF01527 Transposase J152_03941 PF00672 HAMP domain J152_03941 PF02203 Tar ligand binding domain homologue J152_03941 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J152_03944 PF03466 LysR substrate binding domain J152_03944 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_03945 PF02525 Flavodoxin-like fold J152_03954 PF00557 Metallopeptidase family M24 J152_03959 PF00140 Sigma-70 factor, region 1.2 J152_03959 PF04542 Sigma-70 region 2 J152_03959 PF04546 Sigma-70, non-essential region J152_03959 PF04539 Sigma-70 region 3 J152_03959 PF04545 Sigma-70, region 4 J152_03959 PF03979 Sigma-70 factor, region 1.1 J152_03960 PF02580 D-Tyr-tRNA(Tyr) deacylase J152_03961 PF03279 Bacterial lipid A biosynthesis acyltransferase J152_03963 PF00925 GTP cyclohydrolase II J152_03967 PF00535 Glycosyl transferase family 2 J152_03970 PF01189 16S rRNA methyltransferase RsmB/F J152_03970 PF01029 NusB family J152_03971 PF02911 Formyl transferase, C-terminal domain J152_03971 PF00551 Formyl transferase J152_03972 PF01327 Polypeptide deformylase J152_03973 PF01476 LysM domain J152_03974 PF02481 DNA recombination-mediator protein A J152_03974 PF17782 DprA winged helix domain J152_03975 PF04361 Protein of unknown function (DUF494) J152_03976 PF07963 Prokaryotic N-terminal methylation motif J152_03976 PF00114 Pilin (bacterial filament) J152_03978 PF01131 DNA topoisomerase J152_03978 PF01751 Toprim domain J152_03978 PF13368 Topoisomerase C-terminal repeat J152_03979 PF01300 Telomere recombination J152_03984 PF01343 Peptidase family S49 J152_03985 PF01554 MatE J152_03989 PF00271 Helicase conserved C-terminal domain J152_03989 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J152_03989 PF18074 Primosomal protein N C-terminal domain J152_03989 PF17764 3′ DNA-binding domain (3′BD) J152_03989 PF00270 DEAD/DEAH box helicase J152_03990 PF00043 Glutathione S-transferase, C-terminal domain J152_03990 PF13417 Glutathione S-transferase, N-terminal domain J152_03993 PF07992 Pyridine nucleotide-disulphide oxidoreductase J152_03994 PF03458 UPF0126 domain J152_03995 PF04542 Sigma-70 region 2 J152_03995 PF04545 Sigma-70, region 4 J152_03996 PF03167 Uracil DNA glycosylase superfamily J152_03997 PF00072 Response regulator receiver domain J152_03997 PF01339 CheB methylesterase J152_03998 PF18075 FtsX extracellular domain J152_03999 PF00005 ABC transporter J152_04000 PF00271 Helicase conserved C-terminal domain J152_04000 PF00270 DEAD/DEAH box helicase J152_04000 PF12300 ATP-dependent RNA helicase RhlB J152_04001 PF00085 Thioredoxin J152_04002 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J152_04002 PF07497 Rho termination factor, RNA-binding domain J152_04002 PF07498 Rho termination factor, N-terminal domain J152_04003 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J152_04004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_04004 PF03466 LysR substrate binding domain J152_04006 PF03971 Monomeric isocitrate dehydrogenase J152_04009 PF09704 CRISPR-associated protein (Cas_Cas5) J152_04014 PF01867 CRISPR associated protein Cas1 J152_04015 PF09827 CRISPR associated protein Cas2 J152_04017 PF01476 LysM domain J152_04017 PF04972 BON domain J152_04018 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J152_04018 PF14489 QueF-like protein J152_04019 PF07687 Peptidase dimerisation domain J152_04019 PF01546 Peptidase family M20/M25/M40 J152_04020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_04021 PF00873 AcrB/AcrD/AcrF family J152_04022 PF00873 AcrB/AcrD/AcrF family J152_04023 PF07063 Domain of unknown function (DUF1338) J152_04031 PF01427 D-ala-D-ala dipeptidase J152_04032 PF01510 N-acetylmuramoyl-L-alanine amidase J152_04034 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J152_04034 PF13378 Enolase C-terminal domain-like J152_04036 PF13520 Amino acid permease J152_04039 PF05360 yiaA/B two helix domain J152_04040 PF07995 Glucose / Sorbosone dehydrogenase J152_04041 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_04041 PF01915 Glycosyl hydrolase family 3 C-terminal domain J152_04041 PF14310 Fibronectin type III-like domain J152_04042 PF02152 Dihydroneopterin aldolase J152_04043 PF00814 Glycoprotease family J152_04044 PF01165 Ribosomal protein S21 J152_04045 PF09424 Yqey-like protein J152_04046 PF03631 Virulence factor BrkB J152_04047 PF08278 DNA primase DnaG DnaB-binding J152_04047 PF08275 DNA primase catalytic core, N-terminal domain J152_04047 PF01807 CHC2 zinc finger J152_04047 PF10410 DnaB-helicase binding domain of primase J152_04048 PF13593 SBF-like CPA transporter family (DUF4137) J152_04050 PF01040 UbiA prenyltransferase family J152_04055 PF00510 Cytochrome c oxidase subunit III J152_04056 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J152_04058 PF00115 Cytochrome C and Quinol oxidase polypeptide I J152_04059 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J152_04059 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J152_04061 PF14850 DNA-binding domain of Proline dehydrogenase J152_04061 PF01619 Proline dehydrogenase J152_04061 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J152_04061 PF00171 Aldehyde dehydrogenase family J152_04069 PF00579 tRNA synthetases class I (W and Y) J152_04070 PF04225 Opacity-associated protein A LysM-like domain J152_04070 PF01551 Peptidase family M23 J152_04071 PF03702 Anhydro-N-acetylmuramic acid kinase J152_04073 PF07690 Major Facilitator Superfamily J152_04074 PF03372 Endonuclease/Exonuclease/phosphatase family J152_04075 PF00156 Phosphoribosyl transferase domain J152_04077 PF13614 AAA domain J152_04078 PF02195 ParB-like nuclease domain J152_04078 PF17762 HTH domain found in ParB protein J152_04080 PF01370 NAD dependent epimerase/dehydratase family J152_04081 PF00535 Glycosyl transferase family 2 J152_04084 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J152_04084 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J152_04084 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J152_04084 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J152_04085 PF00692 dUTPase J152_04086 PF02441 Flavoprotein J152_04086 PF04127 DNA / pantothenate metabolism flavoprotein J152_04087 PF04002 RadC-like JAB domain J152_04088 PF00750 tRNA synthetases class I (R) J152_04088 PF03485 Arginyl tRNA synthetase N terminal domain J152_04088 PF05746 DALR anticodon binding domain J152_04091 PF00106 short chain dehydrogenase J152_04092 PF01757 Acyltransferase family J152_04093 PF03033 Glycosyltransferase family 28 N-terminal domain J152_04094 PF00501 AMP-binding enzyme J152_04094 PF13193 AMP-binding enzyme C-terminal domain J152_04094 PF00975 Thioesterase domain J152_04094 PF00550 Phosphopantetheine attachment site J152_04094 PF00668 Condensation domain J152_04095 PF17944 Arginine decarboxylase C-terminal helical extension J152_04095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J152_04095 PF17810 Arginine decarboxylase helical bundle domain J152_04096 PF17284 Spermidine synthase tetramerisation domain J152_04101 PF00543 Nitrogen regulatory protein P-II J152_04102 PF04380 Membrane fusogenic activity J152_04103 PF01078 Magnesium chelatase, subunit ChlI J152_04103 PF13335 Magnesium chelatase, subunit ChlI C-terminal J152_04109 PF13276 HTH-like domain J152_04109 PF13683 Integrase core domain J152_04113 PF00570 HRDC domain J152_04113 PF00580 UvrD/REP helicase N-terminal domain J152_04113 PF13361 UvrD-like helicase C-terminal domain J152_04116 PF01527 Transposase J152_04117 PF02463 RecF/RecN/SMC N terminal domain J152_04126 PF13335 Magnesium chelatase, subunit ChlI C-terminal J152_04126 PF01078 Magnesium chelatase, subunit ChlI J152_04129 PF12792 CSS motif domain associated with EAL J152_04129 PF00563 EAL domain J152_04130 PF00487 Fatty acid desaturase J152_04131 PF00970 Oxidoreductase FAD-binding domain J152_04131 PF00111 2Fe-2S iron-sulfur cluster binding domain J152_04131 PF00175 Oxidoreductase NAD-binding domain J152_04132 PF00440 Bacterial regulatory proteins, tetR family J152_04138 PF01139 tRNA-splicing ligase RtcB J152_04146 PF01370 NAD dependent epimerase/dehydratase family J152_04146 PF08338 Domain of unknown function (DUF1731) J152_04147 PF00072 Response regulator receiver domain J152_04147 PF00486 Transcriptional regulatory protein, C terminal J152_04148 PF00512 His Kinase A (phospho-acceptor) domain J152_04148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_04148 PF08521 Two-component sensor kinase N-terminal J152_04152 PF00595 PDZ domain J152_04156 PF01594 AI-2E family transporter J152_04157 PF13419 Haloacid dehalogenase-like hydrolase J152_04158 PF00883 Cytosol aminopeptidase family, catalytic domain J152_04158 PF02789 Cytosol aminopeptidase family, N-terminal domain J152_04160 PF04542 Sigma-70 region 2 J152_04160 PF08281 Sigma-70, region 4 J152_04161 PF00199 Catalase J152_04164 PF00072 Response regulator receiver domain J152_04164 PF00196 Bacterial regulatory proteins, luxR family J152_04165 PF07730 Histidine kinase J152_04166 PF13533 Biotin-lipoyl like J152_04167 PF00005 ABC transporter J152_04171 PF00892 EamA-like transporter family J152_04172 PF00892 EamA-like transporter family J152_04173 PF00892 EamA-like transporter family J152_04176 PF00753 Metallo-beta-lactamase superfamily J152_04177 PF00579 tRNA synthetases class I (W and Y) J152_04178 PF05532 CsbD-like J152_04181 PF00491 Arginase family J152_04186 PF02223 Thymidylate kinase J152_04189 PF03309 Type III pantothenate kinase J152_04190 PF02237 Biotin protein ligase C terminal domain J152_04190 PF08279 HTH domain J152_04190 PF03099 Biotin/lipoate A/B protein ligase family J152_04192 PF06167 Glucose-regulated metallo-peptidase M90 J152_04195 PF00672 HAMP domain J152_04195 PF00512 His Kinase A (phospho-acceptor) domain J152_04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_04196 PF00072 Response regulator receiver domain J152_04196 PF00486 Transcriptional regulatory protein, C terminal J152_04198 PF01207 Dihydrouridine synthase (Dus) J152_04201 PF06628 Catalase-related immune-responsive J152_04201 PF00199 Catalase J152_04202 PF06733 DEAD_2 J152_04202 PF13307 Helicase C-terminal domain J152_04205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J152_04205 PF01488 Shikimate / quinate 5-dehydrogenase J152_04205 PF08501 Shikimate dehydrogenase substrate binding domain J152_04207 PF00667 FAD binding domain J152_04207 PF00175 Oxidoreductase NAD-binding domain J152_04207 PF00258 Flavodoxin J152_04209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_04209 PF03466 LysR substrate binding domain J152_04211 PF00490 Delta-aminolevulinic acid dehydratase J152_04215 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J152_04215 PF00326 Prolyl oligopeptidase family J152_04216 PF02798 Glutathione S-transferase, N-terminal domain J152_04216 PF00043 Glutathione S-transferase, C-terminal domain J152_04220 PF04820 Tryptophan halogenase J152_04223 PF00005 ABC transporter J152_04225 PF01381 Helix-turn-helix J152_04227 PF01229 Glycosyl hydrolases family 39 J152_04228 PF02583 Metal-sensitive transcriptional repressor J152_04229 PF01545 Cation efflux family J152_04229 PF16916 Dimerisation domain of Zinc Transporter J152_04231 PF07715 TonB-dependent Receptor Plug Domain J152_04231 PF00593 TonB dependent receptor J152_04233 PF12833 Helix-turn-helix domain J152_04233 PF01965 DJ-1/PfpI family J152_04234 PF00970 Oxidoreductase FAD-binding domain J152_04234 PF00111 2Fe-2S iron-sulfur cluster binding domain J152_04234 PF00175 Oxidoreductase NAD-binding domain J152_04235 PF00005 ABC transporter J152_04236 PF01061 ABC-2 type transporter J152_04239 PF08546 Ketopantoate reductase PanE/ApbA C terminal J152_04239 PF02558 Ketopantoate reductase PanE/ApbA J152_04245 PF00268 Ribonucleotide reductase, small chain J152_04246 PF02867 Ribonucleotide reductase, barrel domain J152_04246 PF00317 Ribonucleotide reductase, all-alpha domain J152_04246 PF03477 ATP cone domain J152_04248 PF00583 Acetyltransferase (GNAT) family J152_04248 PF13607 Succinyl-CoA ligase like flavodoxin domain J152_04248 PF13380 CoA binding domain J152_04249 PF03448 MgtE intracellular N domain J152_04249 PF00571 CBS domain J152_04249 PF01769 Divalent cation transporter J152_04250 PF00194 Eukaryotic-type carbonic anhydrase J152_04251 PF00999 Sodium/hydrogen exchanger family J152_04251 PF02254 TrkA-N domain J152_04252 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J152_04252 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J152_04253 PF00723 Glycosyl hydrolases family 15 J152_04256 PF05166 YcgL domain J152_04257 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_04257 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_04259 PF00535 Glycosyl transferase family 2 J152_04270 PF07977 FabA-like domain J152_04271 PF01553 Acyltransferase J152_04273 PF00550 Phosphopantetheine attachment site J152_04274 PF04820 Tryptophan halogenase J152_04278 PF07676 WD40-like Beta Propeller Repeat J152_04278 PF00326 Prolyl oligopeptidase family J152_04281 PF01218 Coproporphyrinogen III oxidase J152_04282 PF01612 3'-5' exonuclease J152_04282 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J152_04282 PF00476 DNA polymerase family A J152_04282 PF01367 5'-3' exonuclease, C-terminal SAM fold J152_04288 PF03793 PASTA domain J152_04288 PF00069 Protein kinase domain J152_04296 PF04717 Type VI secretion system, phage-baseplate injector J152_04299 PF00069 Protein kinase domain J152_04299 PF03793 PASTA domain J152_04301 PF08281 Sigma-70, region 4 J152_04301 PF04542 Sigma-70 region 2 J152_04304 PF00328 Histidine phosphatase superfamily (branch 2) J152_04311 PF10431 C-terminal, D2-small domain, of ClpB protein J152_04311 PF17871 AAA lid domain J152_04311 PF07724 AAA domain (Cdc48 subfamily) J152_04311 PF00004 ATPase family associated with various cellular activities (AAA) J152_04316 PF05638 Type VI secretion system effector, Hcp J152_04321 PF14602 Hexapeptide repeat of succinyl-transferase J152_04321 PF12464 Maltose acetyltransferase J152_04322 PF13361 UvrD-like helicase C-terminal domain J152_04322 PF00580 UvrD/REP helicase N-terminal domain J152_04324 PF13091 PLD-like domain J152_04324 PF13396 Phospholipase_D-nuclease N-terminal J152_04325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_04325 PF03466 LysR substrate binding domain J152_04326 PF03737 Aldolase/RraA J152_04327 PF04303 PrpF protein J152_04328 PF04909 Amidohydrolase J152_04329 PF00471 Ribosomal protein L33 J152_04330 PF00830 Ribosomal L28 family J152_04331 PF00873 AcrB/AcrD/AcrF family J152_04332 PF13533 Biotin-lipoyl like J152_04336 PF02527 rRNA small subunit methyltransferase G J152_04337 PF09423 PhoD-like phosphatase J152_04337 PF16655 PhoD-like phosphatase, N-terminal domain J152_04339 PF16655 PhoD-like phosphatase, N-terminal domain J152_04339 PF09423 PhoD-like phosphatase J152_04340 PF01648 4'-phosphopantetheinyl transferase superfamily J152_04341 PF04226 Transglycosylase associated protein J152_04343 PF03372 Endonuclease/Exonuclease/phosphatase family J152_04345 PF00480 ROK family J152_04347 PF09312 SurA N-terminal domain J152_04349 PF00474 Sodium:solute symporter family J152_04350 PF04341 Protein of unknown function, DUF485 J152_04352 PF13193 AMP-binding enzyme C-terminal domain J152_04352 PF16177 Acetyl-coenzyme A synthetase N-terminus J152_04352 PF00501 AMP-binding enzyme J152_04353 PF00196 Bacterial regulatory proteins, luxR family J152_04353 PF00072 Response regulator receiver domain J152_04358 PF04616 Glycosyl hydrolases family 43 J152_04358 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J152_04359 PF00248 Aldo/keto reductase family J152_04362 PF01557 Fumarylacetoacetate (FAA) hydrolase family J152_04363 PF13378 Enolase C-terminal domain-like J152_04363 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J152_04365 PF05336 L-rhamnose mutarotase J152_04366 PF07690 Major Facilitator Superfamily J152_04367 PF09339 IclR helix-turn-helix domain J152_04367 PF01614 Bacterial transcriptional regulator J152_04368 PF02659 Putative manganese efflux pump J152_04369 PF00512 His Kinase A (phospho-acceptor) domain J152_04369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_04371 PF06165 Glycosyltransferase family 36 J152_04371 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J152_04374 PF01011 PQQ enzyme repeat J152_04374 PF13570 PQQ-like domain J152_04374 PF13360 PQQ-like domain J152_04378 PF04357 TamB, inner membrane protein subunit of TAM complex J152_04379 PF17243 POTRA domain TamA domain 1 J152_04379 PF01103 Surface antigen J152_04382 PF01527 Transposase J152_04384 PF00664 ABC transporter transmembrane region J152_04384 PF00005 ABC transporter J152_04384 PF03412 Peptidase C39 family J152_04386 PF05746 DALR anticodon binding domain J152_04386 PF02092 Glycyl-tRNA synthetase beta subunit J152_04387 PF02091 Glycyl-tRNA synthetase alpha subunit J152_04388 PF00437 Type II/IV secretion system protein J152_04388 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J152_04390 PF00117 Glutamine amidotransferase class-I J152_04390 PF00958 GMP synthase C terminal domain J152_04392 PF00902 Sec-independent protein translocase protein (TatC) J152_04393 PF02416 mttA/Hcf106 family J152_04394 PF02416 mttA/Hcf106 family J152_04396 PF00762 Ferrochelatase J152_04397 PF12697 Alpha/beta hydrolase family J152_04399 PF04381 Putative exonuclease, RdgC J152_04400 PF01171 PP-loop family J152_04402 PF00356 Bacterial regulatory proteins, lacI family J152_04403 PF07488 Glycosyl hydrolase family 67 middle domain J152_04403 PF07477 Glycosyl hydrolase family 67 C-terminus J152_04403 PF03648 Glycosyl hydrolase family 67 N-terminus J152_04405 PF13378 Enolase C-terminal domain-like J152_04405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J152_04406 PF04616 Glycosyl hydrolases family 43 J152_04406 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J152_04407 PF00933 Glycosyl hydrolase family 3 N terminal domain J152_04407 PF14310 Fibronectin type III-like domain J152_04407 PF01915 Glycosyl hydrolase family 3 C-terminal domain J152_04407 PF07691 PA14 domain J152_04408 PF01232 Mannitol dehydrogenase Rossmann domain J152_04408 PF08125 Mannitol dehydrogenase C-terminal domain J152_04413 PF00171 Aldehyde dehydrogenase family J152_04416 PF00202 Aminotransferase class-III J152_04417 PF00202 Aminotransferase class-III J152_04419 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J152_04419 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J152_04422 PF08450 SMP-30/Gluconolactonase/LRE-like region J152_04423 PF00331 Glycosyl hydrolase family 10 J152_04424 PF02837 Glycosyl hydrolases family 2, sugar binding domain J152_04424 PF00703 Glycosyl hydrolases family 2 J152_04424 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J152_04424 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J152_04424 PF16355 Domain of unknown function (DUF4982) J152_04425 PF02614 Glucuronate isomerase J152_04426 PF00553 Cellulose binding domain J152_04426 PF03422 Carbohydrate binding module (family 6) J152_04426 PF00331 Glycosyl hydrolase family 10 J152_04428 PF03422 Carbohydrate binding module (family 6) J152_04428 PF00331 Glycosyl hydrolase family 10 J152_04428 PF00553 Cellulose binding domain J152_04432 PF04616 Glycosyl hydrolases family 43 J152_04442 PF02801 Beta-ketoacyl synthase, C-terminal domain J152_04442 PF08240 Alcohol dehydrogenase GroES-like domain J152_04442 PF00107 Zinc-binding dehydrogenase J152_04442 PF16197 Ketoacyl-synthetase C-terminal extension J152_04442 PF14765 Polyketide synthase dehydratase J152_04442 PF00550 Phosphopantetheine attachment site J152_04442 PF08659 KR domain J152_04442 PF00109 Beta-ketoacyl synthase, N-terminal domain J152_04442 PF00698 Acyl transferase domain J152_04443 PF01553 Acyltransferase J152_04445 PF00356 Bacterial regulatory proteins, lacI family J152_04448 PF04820 Tryptophan halogenase J152_04449 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J152_04450 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J152_04452 PF04337 Protein of unknown function, DUF480 J152_04455 PF13361 UvrD-like helicase C-terminal domain J152_04455 PF00580 UvrD/REP helicase N-terminal domain J152_04456 PF00265 Thymidine kinase J152_04457 PF00360 Phytochrome region J152_04457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J152_04457 PF01590 GAF domain J152_04457 PF00512 His Kinase A (phospho-acceptor) domain J152_04457 PF08446 PAS fold J152_04458 PF04349 Periplasmic glucan biosynthesis protein, MdoG J152_04460 PF06827 Zinc finger found in FPG and IleRS J152_04460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J152_04460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J152_04467 PF03594 Benzoate membrane transport protein J152_04468 PF01590 GAF domain J152_04468 PF08446 PAS fold J152_04468 PF13426 PAS domain J152_04468 PF00360 Phytochrome region J152_04469 PF01126 Heme oxygenase J152_04470 PF07690 Major Facilitator Superfamily J152_04471 PF01263 Aldose 1-epimerase J152_04473 PF02810 SEC-C motif J152_04474 PF01925 Sulfite exporter TauE/SafE J152_04478 PF01227 GTP cyclohydrolase I J152_04480 PF07869 Protein of unknown function (DUF1656) J152_04481 PF00529 HlyD membrane-fusion protein of T1SS J152_04481 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J152_04482 PF02321 Outer membrane efflux protein J152_04483 PF04632 Fusaric acid resistance protein family J152_04484 PF00083 Sugar (and other) transporter J152_04485 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J152_04486 PF13091 PLD-like domain J152_04486 PF13396 Phospholipase_D-nuclease N-terminal J152_04491 PF01850 PIN domain J152_04496 PF00849 RNA pseudouridylate synthase J152_04498 PF01527 Transposase J152_04502 PF00289 Biotin carboxylase, N-terminal domain J152_04502 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J152_04502 PF02785 Biotin carboxylase C-terminal domain J152_04503 PF01425 Amidase J152_04510 PF13538 UvrD-like helicase C-terminal domain J152_04513 PF00580 UvrD/REP helicase N-terminal domain J152_04513 PF12705 PD-(D/E)XK nuclease superfamily J152_04513 PF13361 UvrD-like helicase C-terminal domain J152_04514 PF17946 RecC C-terminal domain J152_04516 PF00005 ABC transporter J152_04517 PF02405 Permease MlaE J152_04518 PF02470 MlaD protein J152_04519 PF05494 MlaC protein J152_04521 PF04333 MlaA lipoprotein J152_04523 PF00255 Glutathione peroxidase J152_04525 PF02646 RmuC family J152_04526 PF08240 Alcohol dehydrogenase GroES-like domain J152_04526 PF00107 Zinc-binding dehydrogenase J152_04527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J152_04527 PF03466 LysR substrate binding domain J152_04529 PF13417 Glutathione S-transferase, N-terminal domain J152_04529 PF00043 Glutathione S-transferase, C-terminal domain J152_04531 PF13520 Amino acid permease J152_04532 PF07971 Glycosyl hydrolase family 92 J152_04532 PF17678 Glycosyl hydrolase family 92 N-terminal domain J152_04533 PF10947 Protein of unknown function (DUF2628) J152_04534 PF00990 Diguanylate cyclase, GGDEF domain J152_04535 PF13556 PucR C-terminal helix-turn-helix domain J152_04535 PF17853 GGDEF-like domain J152_04535 PF05651 Putative sugar diacid recognition J152_04536 PF02595 Glycerate kinase family J152_04537 PF07690 Major Facilitator Superfamily J152_04540 PF10672 S-adenosylmethionine-dependent methyltransferase J152_04540 PF17785 PUA-like domain J152_04542 PF03741 Integral membrane protein TerC family J152_04543 PF01694 Rhomboid family J152_04544 PF03009 Glycerophosphoryl diester phosphodiesterase family J152_04546 PF01569 PAP2 superfamily J152_04547 PF10396 GTP-binding protein TrmE N-terminus J152_04547 PF12631 MnmE helical domain J152_04547 PF01926 50S ribosome-binding GTPase J152_04548 PF01522 Polysaccharide deacetylase J152_04549 PF02096 60Kd inner membrane protein J152_04549 PF14849 YidC periplasmic domain J152_04550 PF00825 Ribonuclease P J152_04551 PF00468 Ribosomal protein L34