J152_00003 SM00857 Resolvase, N terminal domain J152_00004 SM00966 SpoVT / AbrB like domain J152_00026 SM00857 Resolvase, N terminal domain J152_00033 SM00670 Large family of predicted nucleotide-binding domains J152_00035 SM00857 Resolvase, N terminal domain J152_00091 SM00470 ParB-like nuclease domain J152_00098 SM00857 Resolvase, N terminal domain J152_00104 SM00670 Large family of predicted nucleotide-binding domains J152_00106 SM00857 Resolvase, N terminal domain J152_00107 SM00382 ATPases associated with a variety of cellular activities J152_00107 SM00760 Bacterial dnaA protein helix-turn-helix domain J152_00108 SM00480 DNA polymerase III beta subunit J152_00111 SM00387 Histidine kinase-like ATPases J152_00111 SM00433 TopoisomeraseII J152_00114 SM00028 Tetratricopeptide repeats J152_00121 SM00155 Phospholipase D. Active site motifs. J152_00124 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_00130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_00130 SM00245 tail specific protease J152_00138 SM00829 Enoylreductase J152_00163 SM00382 ATPases associated with a variety of cellular activities J152_00187 SM00487 DEAD-like helicases superfamily J152_00187 SM00490 helicase superfamily c-terminal domain J152_00191 SM00822 J152_00191 J152_00192 SM00822 J152_00192 J152_00241 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J152_00245 SM00421 helix_turn_helix, Lux Regulon J152_00245 SM00448 cheY-homologous receiver domain J152_00249 SM00862 Transcriptional regulatory protein, C terminal J152_00265 SM00642 Alpha-amylase domain J152_00266 SM00642 Alpha-amylase domain J152_00267 SM00642 Alpha-amylase domain J152_00277 SM00354 helix_turn _helix lactose operon repressor J152_00285 SM00344 helix_turn_helix ASNC type J152_00289 SM00382 ATPases associated with a variety of cellular activities J152_00292 SM00382 ATPases associated with a variety of cellular activities J152_00298 SM00530 Helix-turn-helix XRE-family like proteins J152_00303 SM00855 Phosphoglycerate mutase family J152_00304 SM00867 YceI-like domain J152_00305 SM00155 Phospholipase D. Active site motifs. J152_00307 SM00563 Phosphate acyltransferases J152_00310 SM00028 Tetratricopeptide repeats J152_00312 SM00829 Enoylreductase J152_00315 SM01230 J152_00315 J152_00316 SM00938 Nitrogen regulatory protein P-II J152_00318 SM00387 Histidine kinase-like ATPases J152_00318 SM00388 His Kinase A (phosphoacceptor) domain J152_00319 SM00382 ATPases associated with a variety of cellular activities J152_00319 SM00448 cheY-homologous receiver domain J152_00331 SM00450 Rhodanese Homology Domain J152_00336 SM00387 Histidine kinase-like ATPases J152_00336 SM00388 His Kinase A (phosphoacceptor) domain J152_00337 SM00382 ATPases associated with a variety of cellular activities J152_00337 SM00448 cheY-homologous receiver domain J152_00359 SM00563 Phosphate acyltransferases J152_00365 SM00342 helix_turn_helix, arabinose operon control protein J152_00370 SM00100 Cyclic nucleotide-monophosphate binding domain J152_00370 SM00267 diguanylate cyclase J152_00376 SM00878 Biotin carboxylase C-terminal domain J152_00381 SM00953 J152_00381 J152_00389 SM00833 Cobalamin synthesis protein cobW C-terminal domain J152_00394 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_00400 SM00829 Enoylreductase J152_00406 SM00487 DEAD-like helicases superfamily J152_00406 SM00490 helicase superfamily c-terminal domain J152_00406 SM00847 Helicase associated domain (HA2) Add an annotation J152_00431 SM00422 helix_turn_helix, mercury resistance J152_00438 SM00448 cheY-homologous receiver domain J152_00438 SM00862 Transcriptional regulatory protein, C terminal J152_00439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_00439 SM00387 Histidine kinase-like ATPases J152_00439 SM00388 His Kinase A (phosphoacceptor) domain J152_00465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_00466 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_00470 SM00342 helix_turn_helix, arabinose operon control protein J152_00477 SM00420 helix_turn_helix, Deoxyribose operon repressor J152_00477 SM01134 J152_00477 J152_00480 SM00882 Coenzyme A transferase J152_00481 SM00882 Coenzyme A transferase J152_00485 SM00998 Adenylosuccinate lyase C-terminus J152_00489 SM00346 helix_turn_helix isocitrate lyase regulation J152_00490 SM00090 RIO-like kinase J152_00493 SM01228 J152_00493 J152_00504 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_00504 SM00876 Biotin and Thiamin Synthesis associated domain J152_00509 SM00369 Leucine-rich repeats, typical (most populated) subfamily J152_00529 SM00382 ATPases associated with a variety of cellular activities J152_00541 SM00267 diguanylate cyclase J152_00543 SM00642 Alpha-amylase domain J152_00544 SM00642 Alpha-amylase domain J152_00546 SM00642 Alpha-amylase domain J152_00548 SM00642 Alpha-amylase domain J152_00557 SM00822 J152_00557 J152_00559 SM00487 DEAD-like helicases superfamily J152_00559 SM00490 helicase superfamily c-terminal domain J152_00562 SM00326 Src homology 3 domains J152_00563 SM00861 Transketolase, pyrimidine binding domain J152_00565 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J152_00569 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_00588 SM00271 DnaJ molecular chaperone homology domain J152_00592 SM00046 Diacylglycerol kinase catalytic domain (presumed) J152_00596 SM00903 Flavin reductase like domain J152_00600 SM00100 Cyclic nucleotide-monophosphate binding domain J152_00600 SM00419 helix_turn_helix, cAMP Regulatory protein J152_00610 SM00387 Histidine kinase-like ATPases J152_00610 SM00388 His Kinase A (phosphoacceptor) domain J152_00610 SM00448 cheY-homologous receiver domain J152_00611 SM00052 Putative diguanylate phosphodiesterase J152_00611 SM00267 diguanylate cyclase J152_00611 SM00448 cheY-homologous receiver domain J152_00622 SM00563 Phosphate acyltransferases J152_00626 SM01209 J152_00626 J152_00626 SM01210 J152_00626 J152_00628 SM00798 AICARFT/IMPCHase bienzyme J152_00628 SM00851 MGS-like domain J152_00631 SM00195 Dual specificity phosphatase, catalytic domain J152_00635 SM00563 Phosphate acyltransferases J152_00640 SM00530 Helix-turn-helix XRE-family like proteins J152_00645 SM00878 Biotin carboxylase C-terminal domain J152_00651 SM00342 helix_turn_helix, arabinose operon control protein J152_00653 SM00234 in StAR and phosphatidylcholine transfer protein J152_00657 SM00883 Chaperonin 10 Kd subunit J152_00668 SM00944 Pro-kumamolisin, activation domain J152_00671 SM00867 YceI-like domain J152_00682 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J152_00684 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_00684 SM00895 J152_00684 J152_00688 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_00688 SM00331 Sigma factor PP2C-like phosphatases J152_00696 SM00342 helix_turn_helix, arabinose operon control protein J152_00708 SM00267 diguanylate cyclase J152_00713 SM00062 Bacterial periplasmic substrate-binding proteins J152_00722 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J152_00722 SM01232 J152_00722 J152_00724 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_00727 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_00727 SM00091 PAS domain J152_00727 SM00267 diguanylate cyclase J152_00728 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_00728 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_00728 SM01049 J152_00728 J152_00729 SM00637 J152_00729 J152_00731 SM00267 diguanylate cyclase J152_00737 SM00448 cheY-homologous receiver domain J152_00737 SM00850 LytTr DNA-binding domain J152_00753 SM00382 ATPases associated with a variety of cellular activities J152_00753 SM01086 C-terminal, D2-small domain, of ClpB protein J152_00759 SM00267 diguanylate cyclase J152_00760 SM01263 J152_00760 J152_00763 SM00564 beta-propeller repeat J152_00764 SM00062 Bacterial periplasmic substrate-binding proteins J152_00764 SM00248 ankyrin repeats J152_00767 SM00829 Enoylreductase J152_00769 SM00382 ATPases associated with a variety of cellular activities J152_00771 SM00268 Actin J152_00776 SM00710 Parallel beta-helix repeats J152_00779 SM00936 Penicillin-binding protein 5, C-terminal domain J152_00783 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_00784 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_00784 SM00245 tail specific protease J152_00795 SM01350 J152_00795 J152_00797 SM00749 bacterial OsmY and nodulation domain J152_00798 SM00387 Histidine kinase-like ATPases J152_00798 SM00388 His Kinase A (phosphoacceptor) domain J152_00799 SM00448 cheY-homologous receiver domain J152_00800 SM00387 Histidine kinase-like ATPases J152_00800 SM00388 His Kinase A (phosphoacceptor) domain J152_00800 SM00448 cheY-homologous receiver domain J152_00806 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J152_00811 SM00382 ATPases associated with a variety of cellular activities J152_00827 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_00827 SM00866 J152_00827 J152_00829 SM00354 helix_turn _helix lactose operon repressor J152_00843 SM00849 Metallo-beta-lactamase superfamily J152_00844 SM00342 helix_turn_helix, arabinose operon control protein J152_00846 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_00846 SM00387 Histidine kinase-like ATPases J152_00846 SM00388 His Kinase A (phosphoacceptor) domain J152_00847 SM00448 cheY-homologous receiver domain J152_00847 SM00862 Transcriptional regulatory protein, C terminal J152_00851 SM00829 Enoylreductase J152_00854 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_00858 SM00382 ATPases associated with a variety of cellular activities J152_00871 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J152_00877 SM00387 Histidine kinase-like ATPases J152_00877 SM00388 His Kinase A (phosphoacceptor) domain J152_00878 SM00448 cheY-homologous receiver domain J152_00878 SM00862 Transcriptional regulatory protein, C terminal J152_00902 SM00842 Cell division protein FtsA J152_00903 SM00864 Tubulin/FtsZ family, GTPase domain J152_00903 SM00865 Tubulin/FtsZ family, C-terminal domain J152_00907 SM00957 SecA DEAD-like domain J152_00907 SM00958 SecA preprotein cross-linking domain J152_00913 SM00829 Enoylreductase J152_00914 SM00944 Pro-kumamolisin, activation domain J152_00917 SM00642 Alpha-amylase domain J152_00924 SM00996 S-adenosyl-L-homocysteine hydrolase J152_00924 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J152_00949 SM00382 ATPases associated with a variety of cellular activities J152_00953 SM00382 ATPases associated with a variety of cellular activities J152_00955 SM00448 cheY-homologous receiver domain J152_00955 SM00862 Transcriptional regulatory protein, C terminal J152_00956 SM00387 Histidine kinase-like ATPases J152_00956 SM00388 His Kinase A (phosphoacceptor) domain J152_00966 SM00382 ATPases associated with a variety of cellular activities J152_00968 SM00382 ATPases associated with a variety of cellular activities J152_00981 SM00382 ATPases associated with a variety of cellular activities J152_00984 SM00650 Ribosomal RNA adenine dimethylases J152_00989 SM00108 Bulb-type mannose-specific lectin J152_00998 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_00998 SM00895 J152_00998 J152_01005 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_01017 SM00448 cheY-homologous receiver domain J152_01018 SM00387 Histidine kinase-like ATPases J152_01018 SM00388 His Kinase A (phosphoacceptor) domain J152_01018 SM00448 cheY-homologous receiver domain J152_01019 SM00421 helix_turn_helix, Lux Regulon J152_01032 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J152_01032 SM00475 5'-3' exonuclease J152_01038 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J152_01038 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J152_01062 SM00852 Probable molybdopterin binding domain J152_01063 SM00028 Tetratricopeptide repeats J152_01064 SM00937 J152_01064 J152_01066 SM00028 Tetratricopeptide repeats J152_01070 SM01400 J152_01070 J152_01081 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J152_01081 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J152_01082 SM00649 Ribosomal protein L11/L12 J152_01088 SM00663 RNA polymerase I subunit A N-terminus J152_01091 SM00838 Elongation factor G C-terminus J152_01091 SM00889 Elongation factor G, domain IV J152_01093 SM01403 J152_01093 J152_01097 SM01382 J152_01097 J152_01097 SM01383 J152_01097 J152_01100 SM00322 K homology RNA-binding domain J152_01104 SM01374 J152_01104 J152_01105 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J152_01117 SM00363 S4 RNA-binding domain J152_01117 SM01390 J152_01117 J152_01118 SM00662 RNA polymerases D J152_01126 SM00838 Elongation factor G C-terminus J152_01132 SM00829 Enoylreductase J152_01141 SM00382 ATPases associated with a variety of cellular activities J152_01143 SM00829 Enoylreductase J152_01148 SM00855 Phosphoglycerate mutase family J152_01159 SM00014 Acid phosphatase homologues J152_01163 SM00091 PAS domain J152_01163 SM00387 Histidine kinase-like ATPases J152_01163 SM00388 His Kinase A (phosphoacceptor) domain J152_01164 SM00448 cheY-homologous receiver domain J152_01164 SM00862 Transcriptional regulatory protein, C terminal J152_01168 SM01329 J152_01168 J152_01202 SM00387 Histidine kinase-like ATPases J152_01203 SM00091 PAS domain J152_01207 SM00382 ATPases associated with a variety of cellular activities J152_01207 SM00994 ClpX C4-type zinc finger J152_01207 SM01086 C-terminal, D2-small domain, of ClpB protein J152_01208 SM00382 ATPases associated with a variety of cellular activities J152_01208 SM00464 Found in ATP-dependent protease La (LON) J152_01209 SM00411 bacterial (prokaryotic) histone like domain J152_01215 SM00257 Lysin motif J152_01216 SM00849 Metallo-beta-lactamase superfamily J152_01219 SM00479 J152_01219 J152_01220 SM00331 Sigma factor PP2C-like phosphatases J152_01220 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J152_01225 SM00849 Metallo-beta-lactamase superfamily J152_01226 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_01239 SM00382 ATPases associated with a variety of cellular activities J152_01241 SM00493 J152_01241 J152_01244 SM00460 Transglutaminase/protease-like homologues J152_01246 SM00382 ATPases associated with a variety of cellular activities J152_01255 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J152_01256 SM00822 J152_01256 J152_01258 SM00825 Beta-ketoacyl synthase J152_01265 SM00382 ATPases associated with a variety of cellular activities J152_01274 SM01359 J152_01274 J152_01274 SM01360 J152_01274 J152_01281 SM00271 DnaJ molecular chaperone homology domain J152_01283 SM00448 cheY-homologous receiver domain J152_01285 SM00244 prohibitin homologues J152_01286 SM00244 prohibitin homologues J152_01287 SM01321 J152_01287 J152_01288 SM00788 Adenylosuccinate synthetase J152_01291 SM00822 J152_01291 J152_01301 SM00220 Serine/Threonine protein kinases, catalytic domain J152_01305 SM00855 Phosphoglycerate mutase family J152_01316 SM00052 Putative diguanylate phosphodiesterase J152_01317 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_01319 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J152_01320 SM01092 CO dehydrogenase flavoprotein C-terminal domain J152_01323 SM00974 J152_01323 J152_01327 SM00966 SpoVT / AbrB like domain J152_01331 SM00481 DNA polymerase alpha chain like domain J152_01333 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_01340 SM00091 PAS domain J152_01340 SM00342 helix_turn_helix, arabinose operon control protein J152_01345 SM01060 J152_01345 J152_01357 SM00448 cheY-homologous receiver domain J152_01357 SM00862 Transcriptional regulatory protein, C terminal J152_01358 SM00387 Histidine kinase-like ATPases J152_01358 SM00388 His Kinase A (phosphoacceptor) domain J152_01365 SM00421 helix_turn_helix, Lux Regulon J152_01365 SM00448 cheY-homologous receiver domain J152_01368 SM00478 endonuclease III J152_01372 SM00244 prohibitin homologues J152_01390 SM00904 Riboflavin kinase J152_01399 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_01400 SM00382 ATPases associated with a variety of cellular activities J152_01402 SM00862 Transcriptional regulatory protein, C terminal J152_01403 SM00342 helix_turn_helix, arabinose operon control protein J152_01410 SM00387 Histidine kinase-like ATPases J152_01410 SM00388 His Kinase A (phosphoacceptor) domain J152_01411 SM00387 Histidine kinase-like ATPases J152_01411 SM00388 His Kinase A (phosphoacceptor) domain J152_01411 SM00448 cheY-homologous receiver domain J152_01416 SM00387 Histidine kinase-like ATPases J152_01416 SM00388 His Kinase A (phosphoacceptor) domain J152_01416 SM00448 cheY-homologous receiver domain J152_01418 SM00138 Methyltransferase, chemotaxis proteins J152_01419 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_01419 SM00387 Histidine kinase-like ATPases J152_01419 SM00388 His Kinase A (phosphoacceptor) domain J152_01419 SM00448 cheY-homologous receiver domain J152_01420 SM00091 PAS domain J152_01420 SM00387 Histidine kinase-like ATPases J152_01420 SM00388 His Kinase A (phosphoacceptor) domain J152_01421 SM00448 cheY-homologous receiver domain J152_01423 SM00813 Alpha-L-arabinofuranosidase C-terminus J152_01426 SM00382 ATPases associated with a variety of cellular activities J152_01426 SM00962 SRP54-type protein, GTPase domain J152_01426 SM00963 SRP54-type protein, helical bundle domain J152_01440 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J152_01440 SM00534 ATPase domain of DNA mismatch repair MUTS family J152_01445 SM00812 Alpha-L-fucosidase J152_01450 SM00530 Helix-turn-helix XRE-family like proteins J152_01460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_01461 SM00838 Elongation factor G C-terminus J152_01464 SM00358 Double-stranded RNA binding motif J152_01464 SM00535 Ribonuclease III family J152_01467 SM00448 cheY-homologous receiver domain J152_01469 SM01118 J152_01469 J152_01476 SM00357 Cold shock protein domain J152_01479 SM00487 DEAD-like helicases superfamily J152_01479 SM00490 helicase superfamily c-terminal domain J152_01485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_01485 SM00267 diguanylate cyclase J152_01489 SM00869 Autotransporter beta-domain J152_01490 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J152_01491 SM00671 Sel1-like repeats. J152_01491 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J152_01530 SM00382 ATPases associated with a variety of cellular activities J152_01547 SM00481 DNA polymerase alpha chain like domain J152_01555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_01561 SM00267 diguanylate cyclase J152_01566 SM00972 Spore Coat Protein U domain J152_01569 SM00972 Spore Coat Protein U domain J152_01571 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_01575 SM01172 J152_01575 J152_01576 SM00710 Parallel beta-helix repeats J152_01576 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J152_01583 SM00434 DNA Topoisomerase IV J152_01584 SM00342 helix_turn_helix, arabinose operon control protein J152_01585 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_01590 SM01217 J152_01590 J152_01591 SM00631 J152_01591 J152_01597 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_01601 SM00382 ATPases associated with a variety of cellular activities J152_01604 SM00947 Carbonic anhydrase J152_01607 SM00357 Cold shock protein domain J152_01630 SM00267 diguanylate cyclase J152_01632 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_01632 SM00267 diguanylate cyclase J152_01668 SM00271 DnaJ molecular chaperone homology domain J152_01678 SM00382 ATPases associated with a variety of cellular activities J152_01683 SM00861 Transketolase, pyrimidine binding domain J152_01685 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J152_01689 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_01689 SM01091 Transporter associated domain J152_01695 SM00382 ATPases associated with a variety of cellular activities J152_01696 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_01700 SM00984 UDP binding domain J152_01704 SM00354 helix_turn _helix lactose operon repressor J152_01708 SM01018 B12 binding domain J152_01710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J152_01714 SM00316 Ribosomal protein S1-like RNA-binding domain J152_01714 SM00357 Cold shock protein domain J152_01714 SM00955 J152_01714 J152_01716 SM00967 RNA 2'-O ribose methyltransferase substrate binding J152_01717 SM00267 diguanylate cyclase J152_01718 SM00479 J152_01718 J152_01721 SM00382 ATPases associated with a variety of cellular activities J152_01728 SM00947 Carbonic anhydrase J152_01730 SM00478 endonuclease III J152_01735 SM00450 Rhodanese Homology Domain J152_01737 SM00644 J152_01737 J152_01741 SM00382 ATPases associated with a variety of cellular activities J152_01742 SM00981 J152_01742 J152_01747 SM00479 J152_01747 J152_01752 SM00947 Carbonic anhydrase J152_01761 SM00421 helix_turn_helix, Lux Regulon J152_01761 SM00448 cheY-homologous receiver domain J152_01773 SM00968 SMC proteins Flexible Hinge Domain J152_01774 SM00771 ZipA, C-terminal domain (FtsZ-binding) J152_01777 SM00292 breast cancer carboxy-terminal domain J152_01777 SM00532 Ligase N family J152_01781 SM00434 DNA Topoisomerase IV J152_01782 SM00564 beta-propeller repeat J152_01789 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_01789 SM00866 J152_01789 J152_01794 SM00240 Forkhead associated domain J152_01798 SM00830 Chorismate mutase type II J152_01815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_01815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_01817 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_01818 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_01818 SM00091 PAS domain J152_01818 SM00387 Histidine kinase-like ATPases J152_01818 SM00388 His Kinase A (phosphoacceptor) domain J152_01818 SM00448 cheY-homologous receiver domain J152_01819 SM00448 cheY-homologous receiver domain J152_01820 SM00382 ATPases associated with a variety of cellular activities J152_01821 SM00091 PAS domain J152_01821 SM00387 Histidine kinase-like ATPases J152_01821 SM00388 His Kinase A (phosphoacceptor) domain J152_01821 SM00448 cheY-homologous receiver domain J152_01852 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_01854 SM00382 ATPases associated with a variety of cellular activities J152_01859 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_01859 SM01091 Transporter associated domain J152_01864 SM00387 Histidine kinase-like ATPases J152_01864 SM00433 TopoisomeraseII J152_01869 SM01192 J152_01869 J152_01869 SM01193 J152_01869 J152_01874 SM00463 Small MutS-related domain J152_01878 SM00257 Lysin motif J152_01881 SM01103 J152_01881 J152_01883 SM00382 ATPases associated with a variety of cellular activities J152_01891 SM00382 ATPases associated with a variety of cellular activities J152_01893 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J152_01896 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_01896 SM00091 PAS domain J152_01896 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_01906 SM00670 Large family of predicted nucleotide-binding domains J152_01910 SM01130 J152_01910 J152_01915 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J152_01924 SM00758 J152_01924 J152_01931 SM00646 J152_01931 J152_01947 SM00052 Putative diguanylate phosphodiesterase J152_01947 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_01947 SM00267 diguanylate cyclase J152_01949 SM00448 cheY-homologous receiver domain J152_01950 SM00387 Histidine kinase-like ATPases J152_01952 SM00014 Acid phosphatase homologues J152_01967 SM00912 haemagglutination activity domain J152_01977 SM00100 Cyclic nucleotide-monophosphate binding domain J152_01977 SM00419 helix_turn_helix, cAMP Regulatory protein J152_01992 SM01007 Class II Aldolase and Adducin N-terminal domain J152_02001 SM00841 Elongation factor P, C-terminal J152_02001 SM01185 J152_02001 J152_02002 SM00822 J152_02002 J152_02006 SM00899 J152_02006 J152_02013 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J152_02015 SM00851 MGS-like domain J152_02015 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J152_02026 SM00850 LytTr DNA-binding domain J152_02027 SM00937 J152_02027 J152_02029 SM00448 cheY-homologous receiver domain J152_02029 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_02030 SM00073 Histidine Phosphotransfer domain J152_02030 SM00387 Histidine kinase-like ATPases J152_02030 SM00388 His Kinase A (phosphoacceptor) domain J152_02030 SM00448 cheY-homologous receiver domain J152_02035 SM00966 SpoVT / AbrB like domain J152_02039 SM00052 Putative diguanylate phosphodiesterase J152_02039 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_02039 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02039 SM00091 PAS domain J152_02039 SM00267 diguanylate cyclase J152_02040 SM00448 cheY-homologous receiver domain J152_02042 SM00138 Methyltransferase, chemotaxis proteins J152_02043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02043 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02048 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02048 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02049 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02051 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02051 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02052 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02052 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02052 SM01049 J152_02052 J152_02054 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02054 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02055 SM00073 Histidine Phosphotransfer domain J152_02055 SM00260 Two component signalling adaptor domain J152_02055 SM00387 Histidine kinase-like ATPases J152_02055 SM01231 J152_02055 J152_02056 SM00448 cheY-homologous receiver domain J152_02058 SM00260 Two component signalling adaptor domain J152_02064 SM00220 Serine/Threonine protein kinases, catalytic domain J152_02078 SM00530 Helix-turn-helix XRE-family like proteins J152_02083 SM00073 Histidine Phosphotransfer domain J152_02083 SM00260 Two component signalling adaptor domain J152_02083 SM00387 Histidine kinase-like ATPases J152_02083 SM01231 J152_02083 J152_02085 SM00448 cheY-homologous receiver domain J152_02088 SM00382 ATPases associated with a variety of cellular activities J152_02088 SM00962 SRP54-type protein, GTPase domain J152_02091 SM00052 Putative diguanylate phosphodiesterase J152_02091 SM00267 diguanylate cyclase J152_02092 SM00267 diguanylate cyclase J152_02093 SM00267 diguanylate cyclase J152_02104 SM00382 ATPases associated with a variety of cellular activities J152_02115 SM00822 J152_02115 J152_02120 SM00382 ATPases associated with a variety of cellular activities J152_02121 SM00448 cheY-homologous receiver domain J152_02123 SM00421 helix_turn_helix, Lux Regulon J152_02123 SM00448 cheY-homologous receiver domain J152_02131 SM00047 Lysozyme subfamily 2 J152_02140 SM00260 Two component signalling adaptor domain J152_02140 SM00448 cheY-homologous receiver domain J152_02141 SM00858 J152_02141 J152_02144 SM00387 Histidine kinase-like ATPases J152_02145 SM00052 Putative diguanylate phosphodiesterase J152_02145 SM00267 diguanylate cyclase J152_02145 SM00448 cheY-homologous receiver domain J152_02146 SM00091 PAS domain J152_02146 SM00387 Histidine kinase-like ATPases J152_02147 SM00052 Putative diguanylate phosphodiesterase J152_02147 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02147 SM00091 PAS domain J152_02147 SM00267 diguanylate cyclase J152_02149 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02154 SM00382 ATPases associated with a variety of cellular activities J152_02154 SM01086 C-terminal, D2-small domain, of ClpB protein J152_02155 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02159 SM00382 ATPases associated with a variety of cellular activities J152_02159 SM00843 J152_02159 J152_02163 SM00382 ATPases associated with a variety of cellular activities J152_02170 SM00562 J152_02170 J152_02172 SM00028 Tetratricopeptide repeats J152_02175 SM00564 beta-propeller repeat J152_02176 SM00382 ATPases associated with a variety of cellular activities J152_02177 SM00852 Probable molybdopterin binding domain J152_02178 SM00450 Rhodanese Homology Domain J152_02187 SM00852 Probable molybdopterin binding domain J152_02192 SM00529 Helix-turn-helix diphteria tox regulatory element J152_02194 SM00479 J152_02194 J152_02208 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02208 SM00732 Likely ribonuclease with RNase H fold. J152_02209 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_02209 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02209 SM00091 PAS domain J152_02209 SM00387 Histidine kinase-like ATPases J152_02209 SM00388 His Kinase A (phosphoacceptor) domain J152_02209 SM00448 cheY-homologous receiver domain J152_02210 SM00448 cheY-homologous receiver domain J152_02227 SM00382 ATPases associated with a variety of cellular activities J152_02238 SM00382 ATPases associated with a variety of cellular activities J152_02240 SM00849 Metallo-beta-lactamase superfamily J152_02243 SM00382 ATPases associated with a variety of cellular activities J152_02246 SM00226 Low molecular weight phosphatase family J152_02248 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J152_02248 SM00465 GIY-YIG type nucleases (URI domain) J152_02254 SM00823 Phosphopantetheine attachment site J152_02261 SM00984 UDP binding domain J152_02265 SM00450 Rhodanese Homology Domain J152_02266 SM00421 helix_turn_helix, Lux Regulon J152_02266 SM00448 cheY-homologous receiver domain J152_02267 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02268 SM00363 S4 RNA-binding domain J152_02276 SM01034 Sensors of blue-light using FAD J152_02297 SM00448 cheY-homologous receiver domain J152_02297 SM00850 LytTr DNA-binding domain J152_02300 SM00869 Autotransporter beta-domain J152_02304 SM00387 Histidine kinase-like ATPases J152_02304 SM00388 His Kinase A (phosphoacceptor) domain J152_02305 SM00421 helix_turn_helix, Lux Regulon J152_02305 SM00448 cheY-homologous receiver domain J152_02306 SM00869 Autotransporter beta-domain J152_02307 SM00052 Putative diguanylate phosphodiesterase J152_02312 SM01012 J152_02312 J152_02321 SM00342 helix_turn_helix, arabinose operon control protein J152_02322 SM00387 Histidine kinase-like ATPases J152_02323 SM00421 helix_turn_helix, Lux Regulon J152_02323 SM00448 cheY-homologous receiver domain J152_02324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02331 SM00530 Helix-turn-helix XRE-family like proteins J152_02345 SM00966 SpoVT / AbrB like domain J152_02350 SM00965 Secretin and TonB N terminus short domain J152_02355 SM00736 Dystroglycan-type cadherin-like domains. J152_02360 SM00382 ATPases associated with a variety of cellular activities J152_02370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J152_02370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J152_02370 SM00493 J152_02370 J152_02395 SM00342 helix_turn_helix, arabinose operon control protein J152_02404 SM00487 DEAD-like helicases superfamily J152_02455 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_02455 SM01240 J152_02455 J152_02460 SM00822 J152_02460 J152_02462 SM00028 Tetratricopeptide repeats J152_02464 SM00411 bacterial (prokaryotic) histone like domain J152_02465 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02481 SM00354 helix_turn _helix lactose operon repressor J152_02486 SM00363 S4 RNA-binding domain J152_02491 SM00382 ATPases associated with a variety of cellular activities J152_02501 SM00357 Cold shock protein domain J152_02502 SM00382 ATPases associated with a variety of cellular activities J152_02503 SM00382 ATPases associated with a variety of cellular activities J152_02509 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J152_02511 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J152_02514 SM00859 Semialdehyde dehydrogenase, NAD binding domain J152_02522 SM00840 J152_02522 J152_02526 SM01234 J152_02526 J152_02534 SM00849 Metallo-beta-lactamase superfamily J152_02539 SM00656 J152_02539 J152_02547 SM00841 Elongation factor P, C-terminal J152_02547 SM01185 J152_02547 J152_02549 SM00052 Putative diguanylate phosphodiesterase J152_02549 SM00267 diguanylate cyclase J152_02549 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02556 SM00382 ATPases associated with a variety of cellular activities J152_02557 SM00487 DEAD-like helicases superfamily J152_02557 SM00490 helicase superfamily c-terminal domain J152_02562 SM00357 Cold shock protein domain J152_02563 SM01322 J152_02563 J152_02565 SM00052 Putative diguanylate phosphodiesterase J152_02565 SM00267 diguanylate cyclase J152_02568 SM00822 J152_02568 J152_02572 SM00853 MutL C terminal dimerisation domain J152_02572 SM01340 J152_02572 J152_02573 SM00646 J152_02573 J152_02580 SM00474 3'-5' exonuclease J152_02584 SM00528 Domain in histone-like proteins of HNS family J152_02602 SM00857 Resolvase, N terminal domain J152_02617 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_02617 SM00267 diguanylate cyclase J152_02618 SM00260 Two component signalling adaptor domain J152_02619 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_02619 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02621 SM00487 DEAD-like helicases superfamily J152_02621 SM00490 helicase superfamily c-terminal domain J152_02632 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_02637 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_02637 SM01091 Transporter associated domain J152_02643 SM00382 ATPases associated with a variety of cellular activities J152_02649 SM01230 J152_02649 J152_02651 SM01230 J152_02651 J152_02653 SM00267 diguanylate cyclase J152_02653 SM00448 cheY-homologous receiver domain J152_02663 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02663 SM00091 PAS domain J152_02663 SM00387 Histidine kinase-like ATPases J152_02663 SM00388 His Kinase A (phosphoacceptor) domain J152_02663 SM00448 cheY-homologous receiver domain J152_02663 SM01079 J152_02663 J152_02664 SM00448 cheY-homologous receiver domain J152_02664 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_02670 SM00354 helix_turn _helix lactose operon repressor J152_02683 SM01323 J152_02683 J152_02686 SM00344 helix_turn_helix ASNC type J152_02701 SM00387 Histidine kinase-like ATPases J152_02711 SM00944 Pro-kumamolisin, activation domain J152_02722 SM01130 J152_02722 J152_02727 SM00342 helix_turn_helix, arabinose operon control protein J152_02728 SM00382 ATPases associated with a variety of cellular activities J152_02728 SM00962 SRP54-type protein, GTPase domain J152_02728 SM00963 SRP54-type protein, helical bundle domain J152_02729 SM00478 endonuclease III J152_02731 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02731 SM00091 PAS domain J152_02731 SM00387 Histidine kinase-like ATPases J152_02731 SM00388 His Kinase A (phosphoacceptor) domain J152_02731 SM00448 cheY-homologous receiver domain J152_02734 SM00465 GIY-YIG type nucleases (URI domain) J152_02740 SM00507 HNH nucleases J152_02741 SM00861 Transketolase, pyrimidine binding domain J152_02746 SM00849 Metallo-beta-lactamase superfamily J152_02763 SM00422 helix_turn_helix, mercury resistance J152_02764 SM00411 bacterial (prokaryotic) histone like domain J152_02765 SM00873 B3/4 domain J152_02765 SM00874 tRNA synthetase B5 domain J152_02765 SM00896 Ferredoxin-fold anticodon binding domain J152_02771 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J152_02772 SM00354 helix_turn _helix lactose operon repressor J152_02773 SM00642 Alpha-amylase domain J152_02780 SM00642 Alpha-amylase domain J152_02791 SM00382 ATPases associated with a variety of cellular activities J152_02803 SM00487 DEAD-like helicases superfamily J152_02803 SM00490 helicase superfamily c-terminal domain J152_02854 SM01001 AIR carboxylase J152_02858 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02858 SM00322 K homology RNA-binding domain J152_02859 SM01387 J152_02859 J152_02863 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02863 SM00322 K homology RNA-binding domain J152_02873 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J152_02874 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J152_02883 SM00822 J152_02883 J152_02886 SM00052 Putative diguanylate phosphodiesterase J152_02886 SM00267 diguanylate cyclase J152_02886 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02900 SM00859 Semialdehyde dehydrogenase, NAD binding domain J152_02906 SM00257 Lysin motif J152_02912 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_02925 SM01160 J152_02925 J152_02936 SM00098 Alkaline phosphatase homologues J152_02937 SM00977 TilS substrate C-terminal domain J152_02940 SM01351 J152_02940 J152_02947 SM00316 Ribosomal protein S1-like RNA-binding domain J152_02973 SM00382 ATPases associated with a variety of cellular activities J152_02980 SM00448 cheY-homologous receiver domain J152_02980 SM00862 Transcriptional regulatory protein, C terminal J152_02981 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_02981 SM00387 Histidine kinase-like ATPases J152_02981 SM00388 His Kinase A (phosphoacceptor) domain J152_02987 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_02987 SM00267 diguanylate cyclase J152_02988 SM00363 S4 RNA-binding domain J152_02989 SM00052 Putative diguanylate phosphodiesterase J152_02989 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_02989 SM00091 PAS domain J152_02989 SM00267 diguanylate cyclase J152_02990 SM00487 DEAD-like helicases superfamily J152_02990 SM00490 helicase superfamily c-terminal domain J152_02999 SM00342 helix_turn_helix, arabinose operon control protein J152_02999 SM00478 endonuclease III J152_02999 SM01009 AlkA N-terminal domain J152_03003 SM00829 Enoylreductase J152_03017 SM00342 helix_turn_helix, arabinose operon control protein J152_03031 SM00645 Papain family cysteine protease J152_03032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_03032 SM00387 Histidine kinase-like ATPases J152_03032 SM00388 His Kinase A (phosphoacceptor) domain J152_03033 SM00448 cheY-homologous receiver domain J152_03033 SM00862 Transcriptional regulatory protein, C terminal J152_03036 SM00487 DEAD-like helicases superfamily J152_03036 SM00490 helicase superfamily c-terminal domain J152_03036 SM00982 J152_03036 J152_03036 SM01058 CarD-like/TRCF domain J152_03043 SM00073 Histidine Phosphotransfer domain J152_03043 SM00260 Two component signalling adaptor domain J152_03043 SM00387 Histidine kinase-like ATPases J152_03043 SM01231 J152_03043 J152_03044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_03045 SM00260 Two component signalling adaptor domain J152_03046 SM00052 Putative diguanylate phosphodiesterase J152_03046 SM00448 cheY-homologous receiver domain J152_03047 SM00138 Methyltransferase, chemotaxis proteins J152_03048 SM00448 cheY-homologous receiver domain J152_03049 SM00155 Phospholipase D. Active site motifs. J152_03052 SM00855 Phosphoglycerate mutase family J152_03062 SM00248 ankyrin repeats J152_03072 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J152_03073 SM01092 CO dehydrogenase flavoprotein C-terminal domain J152_03075 SM00829 Enoylreductase J152_03076 SM00267 diguanylate cyclase J152_03077 SM00487 DEAD-like helicases superfamily J152_03097 SM00732 Likely ribonuclease with RNase H fold. J152_03104 SM00382 ATPases associated with a variety of cellular activities J152_03107 SM00411 bacterial (prokaryotic) histone like domain J152_03113 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J152_03116 SM00382 ATPases associated with a variety of cellular activities J152_03122 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J152_03123 SM00671 Sel1-like repeats. J152_03129 SM00054 EF-hand, calcium binding motif J152_03147 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_03151 SM00382 ATPases associated with a variety of cellular activities J152_03160 SM00924 MgtE intracellular N domain J152_03166 SM00656 J152_03166 J152_03168 SM00421 helix_turn_helix, Lux Regulon J152_03174 SM00849 Metallo-beta-lactamase superfamily J152_03176 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J152_03180 SM00422 helix_turn_helix, mercury resistance J152_03207 SM00342 helix_turn_helix, arabinose operon control protein J152_03209 SM00387 Histidine kinase-like ATPases J152_03209 SM00388 His Kinase A (phosphoacceptor) domain J152_03209 SM00448 cheY-homologous receiver domain J152_03210 SM00387 Histidine kinase-like ATPases J152_03210 SM00388 His Kinase A (phosphoacceptor) domain J152_03210 SM00448 cheY-homologous receiver domain J152_03212 SM00387 Histidine kinase-like ATPases J152_03212 SM00388 His Kinase A (phosphoacceptor) domain J152_03212 SM00448 cheY-homologous receiver domain J152_03213 SM00867 YceI-like domain J152_03215 SM00867 YceI-like domain J152_03227 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_03233 SM00028 Tetratricopeptide repeats J152_03253 SM00812 Alpha-L-fucosidase J152_03254 SM00636 J152_03254 J152_03257 SM00758 J152_03257 J152_03257 SM01217 J152_03257 J152_03263 SM01149 J152_03263 J152_03270 SM00369 Leucine-rich repeats, typical (most populated) subfamily J152_03274 SM00260 Two component signalling adaptor domain J152_03276 SM00073 Histidine Phosphotransfer domain J152_03276 SM00260 Two component signalling adaptor domain J152_03276 SM00387 Histidine kinase-like ATPases J152_03276 SM00448 cheY-homologous receiver domain J152_03276 SM01231 J152_03276 J152_03277 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03278 SM00260 Two component signalling adaptor domain J152_03279 SM00448 cheY-homologous receiver domain J152_03280 SM00448 cheY-homologous receiver domain J152_03285 SM00491 J152_03285 J152_03290 SM00954 Region found in RelA / SpoT proteins J152_03299 SM00382 ATPases associated with a variety of cellular activities J152_03299 SM00487 DEAD-like helicases superfamily J152_03299 SM00490 helicase superfamily c-terminal domain J152_03299 SM00847 Helicase associated domain (HA2) Add an annotation J152_03301 SM00341 Helicase and RNase D C-terminal J152_03301 SM00487 DEAD-like helicases superfamily J152_03301 SM00490 helicase superfamily c-terminal domain J152_03301 SM00956 J152_03301 J152_03303 SM00448 cheY-homologous receiver domain J152_03308 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03308 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_03311 SM00448 cheY-homologous receiver domain J152_03312 SM00091 PAS domain J152_03312 SM00911 HWE histidine kinase J152_03323 SM00382 ATPases associated with a variety of cellular activities J152_03326 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J152_03333 SM00834 Putative regulatory protein J152_03342 SM00382 ATPases associated with a variety of cellular activities J152_03362 SM00855 Phosphoglycerate mutase family J152_03374 SM00382 ATPases associated with a variety of cellular activities J152_03374 SM01086 C-terminal, D2-small domain, of ClpB protein J152_03375 SM00382 ATPases associated with a variety of cellular activities J152_03377 SM00062 Bacterial periplasmic substrate-binding proteins J152_03392 SM00564 beta-propeller repeat J152_03393 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03414 SM01126 J152_03414 J152_03416 SM00881 CoA binding domain J152_03418 SM00387 Histidine kinase-like ATPases J152_03418 SM00388 His Kinase A (phosphoacceptor) domain J152_03419 SM00382 ATPases associated with a variety of cellular activities J152_03419 SM00448 cheY-homologous receiver domain J152_03433 SM00387 Histidine kinase-like ATPases J152_03433 SM00388 His Kinase A (phosphoacceptor) domain J152_03434 SM00448 cheY-homologous receiver domain J152_03434 SM00862 Transcriptional regulatory protein, C terminal J152_03437 SM00642 Alpha-amylase domain J152_03438 SM00528 Domain in histone-like proteins of HNS family J152_03440 SM00318 Staphylococcal nuclease homologues J152_03455 SM00387 Histidine kinase-like ATPases J152_03455 SM00388 His Kinase A (phosphoacceptor) domain J152_03456 SM00448 cheY-homologous receiver domain J152_03458 SM00646 J152_03458 J152_03467 SM00530 Helix-turn-helix XRE-family like proteins J152_03471 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_03471 SM00387 Histidine kinase-like ATPases J152_03475 SM00255 Toll - interleukin 1 - resistance J152_03478 SM00869 Autotransporter beta-domain J152_03488 SM00354 helix_turn _helix lactose operon repressor J152_03494 SM00967 RNA 2'-O ribose methyltransferase substrate binding J152_03515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_03515 SM00387 Histidine kinase-like ATPases J152_03521 SM00506 Appr-1"-p processing enzyme J152_03530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J152_03535 SM00849 Metallo-beta-lactamase superfamily J152_03538 SM00382 ATPases associated with a variety of cellular activities J152_03550 SM00861 Transketolase, pyrimidine binding domain J152_03553 SM00028 Tetratricopeptide repeats J152_03553 SM00327 von Willebrand factor (vWF) type A domain J152_03554 SM00327 von Willebrand factor (vWF) type A domain J152_03557 SM00382 ATPases associated with a variety of cellular activities J152_03559 SM00965 Secretin and TonB N terminus short domain J152_03570 SM00487 DEAD-like helicases superfamily J152_03570 SM00490 helicase superfamily c-terminal domain J152_03572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J152_03572 SM00954 Region found in RelA / SpoT proteins J152_03573 SM01409 J152_03573 J152_03574 SM00072 Guanylate kinase homologues. J152_03579 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_03584 SM01011 Aminopeptidase P, N-terminal domain J152_03599 SM00028 Tetratricopeptide repeats J152_03599 SM00382 ATPases associated with a variety of cellular activities J152_03599 SM00421 helix_turn_helix, Lux Regulon J152_03613 SM00464 Found in ATP-dependent protease La (LON) J152_03623 SM00342 helix_turn_helix, arabinose operon control protein J152_03624 SM00862 Transcriptional regulatory protein, C terminal J152_03628 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03634 SM00917 LeuA allosteric (dimerisation) domain J152_03635 SM01329 J152_03635 J152_03639 SM00267 diguanylate cyclase J152_03649 SM00919 Malic enzyme, NAD binding domain J152_03649 SM01274 J152_03649 J152_03652 SM00387 Histidine kinase-like ATPases J152_03652 SM00388 His Kinase A (phosphoacceptor) domain J152_03652 SM00448 cheY-homologous receiver domain J152_03660 SM00421 helix_turn_helix, Lux Regulon J152_03660 SM00448 cheY-homologous receiver domain J152_03662 SM00387 Histidine kinase-like ATPases J152_03662 SM00388 His Kinase A (phosphoacceptor) domain J152_03663 SM00448 cheY-homologous receiver domain J152_03663 SM00862 Transcriptional regulatory protein, C terminal J152_03667 SM00822 J152_03667 J152_03668 SM00354 helix_turn _helix lactose operon repressor J152_03671 SM00642 Alpha-amylase domain J152_03673 SM01154 J152_03673 J152_03680 SM00450 Rhodanese Homology Domain J152_03693 SM00028 Tetratricopeptide repeats J152_03710 SM00345 helix_turn_helix gluconate operon transcriptional repressor J152_03710 SM00866 J152_03710 J152_03722 SM00382 ATPases associated with a variety of cellular activities J152_03727 SM01211 J152_03727 J152_03740 SM00656 J152_03740 J152_03746 SM00528 Domain in histone-like proteins of HNS family J152_03749 SM00382 ATPases associated with a variety of cellular activities J152_03755 SM00882 Coenzyme A transferase J152_03756 SM00882 Coenzyme A transferase J152_03759 SM00984 UDP binding domain J152_03764 SM00893 Electron transfer flavoprotein domain J152_03765 SM00893 Electron transfer flavoprotein domain J152_03779 SM00382 ATPases associated with a variety of cellular activities J152_03782 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_03789 SM00487 DEAD-like helicases superfamily J152_03789 SM00490 helicase superfamily c-terminal domain J152_03796 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_03803 SM00825 Beta-ketoacyl synthase J152_03818 SM00382 ATPases associated with a variety of cellular activities J152_03822 SM00382 ATPases associated with a variety of cellular activities J152_03822 SM00387 Histidine kinase-like ATPases J152_03822 SM00448 cheY-homologous receiver domain J152_03825 SM00830 Chorismate mutase type II J152_03827 SM00382 ATPases associated with a variety of cellular activities J152_03841 SM00986 Uracil DNA glycosylase superfamily J152_03841 SM00987 UreE urease accessory protein, C-terminal domain J152_03847 SM00382 ATPases associated with a variety of cellular activities J152_03847 SM00930 J152_03847 J152_03851 SM00387 Histidine kinase-like ATPases J152_03851 SM00388 His Kinase A (phosphoacceptor) domain J152_03851 SM00448 cheY-homologous receiver domain J152_03861 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_03861 SM00091 PAS domain J152_03861 SM00387 Histidine kinase-like ATPases J152_03861 SM00388 His Kinase A (phosphoacceptor) domain J152_03861 SM00448 cheY-homologous receiver domain J152_03865 SM01005 Alanine racemase, C-terminal domain J152_03867 SM00344 helix_turn_helix ASNC type J152_03878 SM00382 ATPases associated with a variety of cellular activities J152_03880 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J152_03881 SM00986 Uracil DNA glycosylase superfamily J152_03881 SM00987 UreE urease accessory protein, C-terminal domain J152_03882 SM00729 Elongator protein 3, MiaB family, Radical SAM J152_03895 SM00448 cheY-homologous receiver domain J152_03895 SM00850 LytTr DNA-binding domain J152_03896 SM00387 Histidine kinase-like ATPases J152_03903 SM00091 PAS domain J152_03903 SM00138 Methyltransferase, chemotaxis proteins J152_03903 SM00911 HWE histidine kinase J152_03904 SM00448 cheY-homologous receiver domain J152_03906 SM00382 ATPases associated with a variety of cellular activities J152_03906 SM00448 cheY-homologous receiver domain J152_03917 SM00382 ATPases associated with a variety of cellular activities J152_03932 SM00382 ATPases associated with a variety of cellular activities J152_03933 SM00631 J152_03933 J152_03941 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J152_03941 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_03942 SM00477 DNA/RNA non-specific endonuclease J152_03942 SM00892 DNA/RNA non-specific endonuclease J152_03973 SM00257 Lysin motif J152_03978 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J152_03978 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J152_03978 SM00493 J152_03978 J152_03989 SM00487 DEAD-like helicases superfamily J152_03989 SM00490 helicase superfamily c-terminal domain J152_03996 SM00986 Uracil DNA glycosylase superfamily J152_03996 SM00987 UreE urease accessory protein, C-terminal domain J152_03997 SM00448 cheY-homologous receiver domain J152_03999 SM00382 ATPases associated with a variety of cellular activities J152_04000 SM00487 DEAD-like helicases superfamily J152_04000 SM00490 helicase superfamily c-terminal domain J152_04002 SM00357 Cold shock protein domain J152_04002 SM00382 ATPases associated with a variety of cellular activities J152_04002 SM00959 Rho termination factor, N-terminal domain J152_04008 SM00487 DEAD-like helicases superfamily J152_04017 SM00257 Lysin motif J152_04023 SM01150 J152_04023 J152_04032 SM00644 J152_04032 J152_04034 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J152_04041 SM01217 J152_04041 J152_04042 SM00905 Dihydroneopterin aldolase J152_04047 SM00400 zinc finger J152_04047 SM00493 J152_04047 J152_04047 SM00766 DNA primase DnaG DnaB-binding J152_04069 SM00363 S4 RNA-binding domain J152_04078 SM00470 ParB-like nuclease domain J152_04082 SM01259 J152_04082 J152_04088 SM00836 DALR anticodon binding domain J152_04088 SM01016 Arginyl tRNA synthetase N terminal dom J152_04094 SM00823 Phosphopantetheine attachment site J152_04094 SM00824 Thioesterase J152_04101 SM00938 Nitrogen regulatory protein P-II J152_04103 SM00382 ATPases associated with a variety of cellular activities J152_04129 SM00052 Putative diguanylate phosphodiesterase J152_04137 SM00244 prohibitin homologues J152_04147 SM00448 cheY-homologous receiver domain J152_04147 SM00862 Transcriptional regulatory protein, C terminal J152_04148 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J152_04148 SM00387 Histidine kinase-like ATPases J152_04148 SM00388 His Kinase A (phosphoacceptor) domain J152_04152 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J152_04161 SM01060 J152_04161 J152_04164 SM00421 helix_turn_helix, Lux Regulon J152_04164 SM00448 cheY-homologous receiver domain J152_04167 SM00382 ATPases associated with a variety of cellular activities J152_04176 SM00849 Metallo-beta-lactamase superfamily J152_04182 SM00960 Roadblock/LC7 domain J152_04195 SM00387 Histidine kinase-like ATPases J152_04195 SM00388 His Kinase A (phosphoacceptor) domain J152_04196 SM00448 cheY-homologous receiver domain J152_04196 SM00862 Transcriptional regulatory protein, C terminal J152_04200 SM00248 ankyrin repeats J152_04201 SM01060 J152_04201 J152_04202 SM00491 J152_04202 J152_04208 SM00477 DNA/RNA non-specific endonuclease J152_04208 SM00892 DNA/RNA non-specific endonuclease J152_04211 SM01004 Delta-aminolevulinic acid dehydratase J152_04219 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J152_04223 SM00382 ATPases associated with a variety of cellular activities J152_04225 SM00530 Helix-turn-helix XRE-family like proteins J152_04233 SM00342 helix_turn_helix, arabinose operon control protein J152_04235 SM00382 ATPases associated with a variety of cellular activities J152_04248 SM00881 CoA binding domain J152_04249 SM00116 Domain in cystathionine beta-synthase and other proteins. J152_04249 SM00924 MgtE intracellular N domain J152_04250 SM01057 Eukaryotic-type carbonic anhydrase J152_04255 SM00248 ankyrin repeats J152_04257 SM00825 Beta-ketoacyl synthase J152_04262 SM00822 J152_04262 J152_04271 SM00563 Phosphate acyltransferases J152_04282 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J152_04282 SM00474 3'-5' exonuclease J152_04282 SM00475 5'-3' exonuclease J152_04282 SM00482 DNA polymerase A domain J152_04285 SM00912 haemagglutination activity domain J152_04289 SM00331 Sigma factor PP2C-like phosphatases J152_04289 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J152_04294 SM00240 Forkhead associated domain J152_04297 SM00028 Tetratricopeptide repeats J152_04299 SM00220 Serine/Threonine protein kinases, catalytic domain J152_04303 SM00965 Secretin and TonB N terminus short domain J152_04305 SM00915 Jacalin-like lectin domain J152_04311 SM00382 ATPases associated with a variety of cellular activities J152_04311 SM01086 C-terminal, D2-small domain, of ClpB protein J152_04319 SM00342 helix_turn_helix, arabinose operon control protein J152_04321 SM01266 J152_04321 J152_04324 SM00155 Phospholipase D. Active site motifs. J152_04353 SM00421 helix_turn_helix, Lux Regulon J152_04353 SM00448 cheY-homologous receiver domain J152_04363 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J152_04367 SM00346 helix_turn_helix isocitrate lyase regulation J152_04369 SM00091 PAS domain J152_04369 SM00387 Histidine kinase-like ATPases J152_04369 SM00388 His Kinase A (phosphoacceptor) domain J152_04369 SM00448 cheY-homologous receiver domain J152_04374 SM00564 beta-propeller repeat J152_04384 SM00382 ATPases associated with a variety of cellular activities J152_04386 SM00836 DALR anticodon binding domain J152_04388 SM00382 ATPases associated with a variety of cellular activities J152_04402 SM00354 helix_turn _helix lactose operon repressor J152_04405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J152_04407 SM00758 J152_04407 J152_04407 SM01217 J152_04407 J152_04411 SM00612 J152_04411 J152_04418 SM01007 Class II Aldolase and Adducin N-terminal domain J152_04423 SM00633 Glycosyl hydrolase family 10 J152_04426 SM00633 Glycosyl hydrolase family 10 J152_04428 SM00633 Glycosyl hydrolase family 10 J152_04442 SM00829 Enoylreductase J152_04443 SM00563 Phosphate acyltransferases J152_04445 SM00354 helix_turn _helix lactose operon repressor J152_04449 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J152_04457 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_04457 SM00388 His Kinase A (phosphoacceptor) domain J152_04460 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J152_04460 SM01232 J152_04460 J152_04468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_04468 SM00091 PAS domain J152_04479 SM00347 helix_turn_helix multiple antibiotic resistance protein J152_04486 SM00155 Phospholipase D. Active site motifs. J152_04502 SM00796 Allophanate hydrolase subunit 1 J152_04502 SM00797 Allophanate hydrolase subunit 2 J152_04502 SM00878 Biotin carboxylase C-terminal domain J152_04516 SM00382 ATPases associated with a variety of cellular activities J152_04526 SM00829 Enoylreductase J152_04534 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J152_04534 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J152_04534 SM00091 PAS domain J152_04534 SM00267 diguanylate cyclase J152_04540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J152_04546 SM00014 Acid phosphatase homologues J152_04548 SM00028 Tetratricopeptide repeats