locus-tag class description J165_00005 PF02796 Helix-turn-helix domain of resolvase J165_00005 PF00239 Resolvase, N terminal domain J165_00007 PF02384 N-6 DNA Methylase J165_00008 PF07669 Eco57I restriction-modification methylase J165_00010 PF01443 Viral (Superfamily 1) RNA helicase J165_00010 PF17841 BID domain of Bartonella effector protein (Bep) J165_00010 PF03389 MobA/MobL family J165_00012 PF02534 Type IV secretory system Conjugative DNA transfer J165_00015 PF01850 PIN domain J165_00017 PF02796 Helix-turn-helix domain of resolvase J165_00017 PF00239 Resolvase, N terminal domain J165_00024 PF01527 Transposase J165_00027 PF13700 Domain of unknown function (DUF4158) J165_00027 PF01526 Tn3 transposase DDE domain J165_00029 PF00239 Resolvase, N terminal domain J165_00029 PF02796 Helix-turn-helix domain of resolvase J165_00031 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J165_00035 PF03377 TAL effector repeat J165_00036 PF02796 Helix-turn-helix domain of resolvase J165_00036 PF00239 Resolvase, N terminal domain J165_00039 PF13700 Domain of unknown function (DUF4158) J165_00039 PF01526 Tn3 transposase DDE domain J165_00040 PF02810 SEC-C motif J165_00040 PF03695 Uncharacterised protein family (UPF0149) J165_00042 PF03377 TAL effector repeat J165_00043 PF13276 HTH-like domain J165_00043 PF00665 Integrase core domain J165_00043 PF13333 Integrase core domain J165_00044 PF13333 Integrase core domain J165_00044 PF00665 Integrase core domain J165_00044 PF13276 HTH-like domain J165_00045 PF02796 Helix-turn-helix domain of resolvase J165_00045 PF00239 Resolvase, N terminal domain J165_00046 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J165_00051 PF13614 AAA domain J165_00052 PF06613 KorB C-terminal beta-barrel domain J165_00052 PF08535 KorB domain J165_00052 PF02195 ParB-like nuclease domain J165_00055 PF01527 Transposase J165_00059 PF01695 IstB-like ATP binding protein J165_00060 PF02796 Helix-turn-helix domain of resolvase J165_00060 PF00665 Integrase core domain J165_00071 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J165_00071 PF17854 FtsK alpha domain J165_00071 PF09397 Ftsk gamma domain J165_00071 PF01580 FtsK/SpoIIIE family J165_00073 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_00079 PF03695 Uncharacterised protein family (UPF0149) J165_00079 PF02810 SEC-C motif J165_00080 PF01526 Tn3 transposase DDE domain J165_00080 PF13700 Domain of unknown function (DUF4158) J165_00083 PF11638 DnaA N-terminal domain J165_00083 PF08299 Bacterial dnaA protein helix-turn-helix J165_00083 PF00308 Bacterial dnaA protein J165_00084 PF02767 DNA polymerase III beta subunit, central domain J165_00084 PF00712 DNA polymerase III beta subunit, N-terminal domain J165_00084 PF02768 DNA polymerase III beta subunit, C-terminal domain J165_00085 PF02463 RecF/RecN/SMC N terminal domain J165_00087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00087 PF01751 Toprim domain J165_00087 PF18053 DNA gyrase B subunit insert domain J165_00087 PF00986 DNA gyrase B subunit, carboxyl terminus J165_00087 PF00204 DNA gyrase B J165_00089 PF01435 Peptidase family M48 J165_00091 PF03544 Gram-negative bacterial TonB protein C-terminal J165_00092 PF01618 MotA/TolQ/ExbB proton channel family J165_00093 PF02472 Biopolymer transport protein ExbD/TolR J165_00094 PF02472 Biopolymer transport protein ExbD/TolR J165_00095 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J165_00097 PF13091 PLD-like domain J165_00097 PF13396 Phospholipase_D-nuclease N-terminal J165_00100 PF04055 Radical SAM superfamily J165_00102 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J165_00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_00106 PF03572 Peptidase family S41 J165_00106 PF13180 PDZ domain J165_00107 PF01551 Peptidase family M23 J165_00109 PF04389 Peptidase family M28 J165_00111 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00112 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00119 PF04616 Glycosyl hydrolases family 43 J165_00123 PF03422 Carbohydrate binding module (family 6) J165_00123 PF00331 Glycosyl hydrolase family 10 J165_00123 PF00553 Cellulose binding domain J165_00125 PF00553 Cellulose binding domain J165_00125 PF03422 Carbohydrate binding module (family 6) J165_00125 PF00331 Glycosyl hydrolase family 10 J165_00126 PF02614 Glucuronate isomerase J165_00127 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_00127 PF00703 Glycosyl hydrolases family 2 J165_00127 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J165_00127 PF16355 Domain of unknown function (DUF4982) J165_00127 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_00128 PF00331 Glycosyl hydrolase family 10 J165_00129 PF08450 SMP-30/Gluconolactonase/LRE-like region J165_00132 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_00132 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_00134 PF00202 Aminotransferase class-III J165_00137 PF00171 Aldehyde dehydrogenase family J165_00142 PF08125 Mannitol dehydrogenase C-terminal domain J165_00142 PF01232 Mannitol dehydrogenase Rossmann domain J165_00143 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_00143 PF07691 PA14 domain J165_00143 PF14310 Fibronectin type III-like domain J165_00143 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_00144 PF04616 Glycosyl hydrolases family 43 J165_00144 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J165_00145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_00145 PF13378 Enolase C-terminal domain-like J165_00147 PF07477 Glycosyl hydrolase family 67 C-terminus J165_00147 PF07488 Glycosyl hydrolase family 67 middle domain J165_00147 PF03648 Glycosyl hydrolase family 67 N-terminus J165_00148 PF00356 Bacterial regulatory proteins, lacI family J165_00150 PF01171 PP-loop family J165_00151 PF04381 Putative exonuclease, RdgC J165_00153 PF12697 Alpha/beta hydrolase family J165_00154 PF00762 Ferrochelatase J165_00156 PF02416 mttA/Hcf106 family J165_00157 PF02416 mttA/Hcf106 family J165_00158 PF00902 Sec-independent protein translocase protein (TatC) J165_00160 PF00117 Glutamine amidotransferase class-I J165_00160 PF00958 GMP synthase C terminal domain J165_00162 PF00437 Type II/IV secretion system protein J165_00162 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_00163 PF02091 Glycyl-tRNA synthetase alpha subunit J165_00164 PF02092 Glycyl-tRNA synthetase beta subunit J165_00164 PF05746 DALR anticodon binding domain J165_00165 PF13181 Tetratricopeptide repeat J165_00170 PF07715 TonB-dependent Receptor Plug Domain J165_00170 PF00593 TonB dependent receptor J165_00171 PF01103 Surface antigen J165_00171 PF17243 POTRA domain TamA domain 1 J165_00172 PF04357 TamB, inner membrane protein subunit of TAM complex J165_00176 PF01011 PQQ enzyme repeat J165_00176 PF13360 PQQ-like domain J165_00176 PF13570 PQQ-like domain J165_00180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J165_00180 PF06165 Glycosyltransferase family 36 J165_00182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00182 PF00512 His Kinase A (phospho-acceptor) domain J165_00183 PF02659 Putative manganese efflux pump J165_00184 PF01614 Bacterial transcriptional regulator J165_00184 PF09339 IclR helix-turn-helix domain J165_00185 PF07690 Major Facilitator Superfamily J165_00186 PF05336 L-rhamnose mutarotase J165_00188 PF13378 Enolase C-terminal domain-like J165_00188 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_00189 PF01557 Fumarylacetoacetate (FAA) hydrolase family J165_00192 PF00248 Aldo/keto reductase family J165_00193 PF04616 Glycosyl hydrolases family 43 J165_00193 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J165_00198 PF00072 Response regulator receiver domain J165_00198 PF00196 Bacterial regulatory proteins, luxR family J165_00199 PF13193 AMP-binding enzyme C-terminal domain J165_00199 PF00501 AMP-binding enzyme J165_00199 PF16177 Acetyl-coenzyme A synthetase N-terminus J165_00201 PF04341 Protein of unknown function, DUF485 J165_00202 PF00474 Sodium:solute symporter family J165_00204 PF09312 SurA N-terminal domain J165_00206 PF00480 ROK family J165_00208 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00210 PF04226 Transglycosylase associated protein J165_00211 PF01648 4'-phosphopantetheinyl transferase superfamily J165_00212 PF09423 PhoD-like phosphatase J165_00212 PF16655 PhoD-like phosphatase, N-terminal domain J165_00214 PF16655 PhoD-like phosphatase, N-terminal domain J165_00214 PF09423 PhoD-like phosphatase J165_00215 PF02527 rRNA small subunit methyltransferase G J165_00219 PF13533 Biotin-lipoyl like J165_00220 PF00873 AcrB/AcrD/AcrF family J165_00221 PF00830 Ribosomal L28 family J165_00222 PF00471 Ribosomal protein L33 J165_00223 PF04909 Amidohydrolase J165_00224 PF04303 PrpF protein J165_00225 PF03737 Aldolase/RraA J165_00226 PF03466 LysR substrate binding domain J165_00226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00227 PF13396 Phospholipase_D-nuclease N-terminal J165_00227 PF13091 PLD-like domain J165_00229 PF13361 UvrD-like helicase C-terminal domain J165_00229 PF00580 UvrD/REP helicase N-terminal domain J165_00230 PF12464 Maltose acetyltransferase J165_00230 PF14602 Hexapeptide repeat of succinyl-transferase J165_00235 PF05638 Type VI secretion system effector, Hcp J165_00240 PF17871 AAA lid domain J165_00240 PF00004 ATPase family associated with various cellular activities (AAA) J165_00240 PF07724 AAA domain (Cdc48 subfamily) J165_00240 PF10431 C-terminal, D2-small domain, of ClpB protein J165_00247 PF00328 Histidine phosphatase superfamily (branch 2) J165_00250 PF04542 Sigma-70 region 2 J165_00250 PF08281 Sigma-70, region 4 J165_00252 PF00069 Protein kinase domain J165_00252 PF03793 PASTA domain J165_00255 PF04717 Type VI secretion system, phage-baseplate injector J165_00263 PF03793 PASTA domain J165_00263 PF00069 Protein kinase domain J165_00269 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J165_00269 PF01367 5'-3' exonuclease, C-terminal SAM fold J165_00269 PF01612 3'-5' exonuclease J165_00269 PF00476 DNA polymerase family A J165_00270 PF01218 Coproporphyrinogen III oxidase J165_00273 PF00326 Prolyl oligopeptidase family J165_00273 PF07676 WD40-like Beta Propeller Repeat J165_00277 PF04820 Tryptophan halogenase J165_00278 PF00550 Phosphopantetheine attachment site J165_00280 PF01553 Acyltransferase J165_00281 PF07977 FabA-like domain J165_00291 PF00535 Glycosyl transferase family 2 J165_00293 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_00293 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_00294 PF05166 YcgL domain J165_00297 PF00723 Glycosyl hydrolases family 15 J165_00298 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J165_00298 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J165_00299 PF00999 Sodium/hydrogen exchanger family J165_00299 PF02254 TrkA-N domain J165_00300 PF00194 Eukaryotic-type carbonic anhydrase J165_00301 PF00571 CBS domain J165_00301 PF01769 Divalent cation transporter J165_00301 PF03448 MgtE intracellular N domain J165_00302 PF13380 CoA binding domain J165_00302 PF00583 Acetyltransferase (GNAT) family J165_00302 PF13607 Succinyl-CoA ligase like flavodoxin domain J165_00304 PF00317 Ribonucleotide reductase, all-alpha domain J165_00304 PF02867 Ribonucleotide reductase, barrel domain J165_00304 PF03477 ATP cone domain J165_00305 PF00268 Ribonucleotide reductase, small chain J165_00311 PF02558 Ketopantoate reductase PanE/ApbA J165_00311 PF08546 Ketopantoate reductase PanE/ApbA C terminal J165_00314 PF01061 ABC-2 type transporter J165_00315 PF00005 ABC transporter J165_00316 PF00175 Oxidoreductase NAD-binding domain J165_00316 PF00970 Oxidoreductase FAD-binding domain J165_00316 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00317 PF01965 DJ-1/PfpI family J165_00317 PF12833 Helix-turn-helix domain J165_00319 PF07715 TonB-dependent Receptor Plug Domain J165_00319 PF00593 TonB dependent receptor J165_00321 PF16916 Dimerisation domain of Zinc Transporter J165_00321 PF01545 Cation efflux family J165_00322 PF02583 Metal-sensitive transcriptional repressor J165_00323 PF01229 Glycosyl hydrolases family 39 J165_00325 PF01381 Helix-turn-helix J165_00327 PF00005 ABC transporter J165_00330 PF04820 Tryptophan halogenase J165_00334 PF00043 Glutathione S-transferase, C-terminal domain J165_00334 PF02798 Glutathione S-transferase, N-terminal domain J165_00335 PF00326 Prolyl oligopeptidase family J165_00335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_00339 PF00490 Delta-aminolevulinic acid dehydratase J165_00341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00341 PF03466 LysR substrate binding domain J165_00343 PF00667 FAD binding domain J165_00343 PF00258 Flavodoxin J165_00343 PF00175 Oxidoreductase NAD-binding domain J165_00345 PF08501 Shikimate dehydrogenase substrate binding domain J165_00345 PF01488 Shikimate / quinate 5-dehydrogenase J165_00345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J165_00348 PF13307 Helicase C-terminal domain J165_00348 PF06733 DEAD_2 J165_00349 PF06628 Catalase-related immune-responsive J165_00349 PF00199 Catalase J165_00352 PF01207 Dihydrouridine synthase (Dus) J165_00354 PF00072 Response regulator receiver domain J165_00354 PF00486 Transcriptional regulatory protein, C terminal J165_00355 PF00672 HAMP domain J165_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00355 PF00512 His Kinase A (phospho-acceptor) domain J165_00358 PF06167 Glucose-regulated metallo-peptidase M90 J165_00360 PF02237 Biotin protein ligase C terminal domain J165_00360 PF03099 Biotin/lipoate A/B protein ligase family J165_00360 PF08279 HTH domain J165_00361 PF03309 Type III pantothenate kinase J165_00364 PF02223 Thymidylate kinase J165_00369 PF00491 Arginase family J165_00372 PF05532 CsbD-like J165_00373 PF00579 tRNA synthetases class I (W and Y) J165_00374 PF00753 Metallo-beta-lactamase superfamily J165_00377 PF00892 EamA-like transporter family J165_00378 PF00892 EamA-like transporter family J165_00382 PF00005 ABC transporter J165_00383 PF13533 Biotin-lipoyl like J165_00384 PF07730 Histidine kinase J165_00385 PF00072 Response regulator receiver domain J165_00385 PF00196 Bacterial regulatory proteins, luxR family J165_00388 PF00199 Catalase J165_00389 PF04542 Sigma-70 region 2 J165_00389 PF08281 Sigma-70, region 4 J165_00391 PF00883 Cytosol aminopeptidase family, catalytic domain J165_00391 PF02789 Cytosol aminopeptidase family, N-terminal domain J165_00392 PF13419 Haloacid dehalogenase-like hydrolase J165_00393 PF01594 AI-2E family transporter J165_00397 PF00595 PDZ domain J165_00401 PF08521 Two-component sensor kinase N-terminal J165_00401 PF00512 His Kinase A (phospho-acceptor) domain J165_00401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00402 PF00486 Transcriptional regulatory protein, C terminal J165_00402 PF00072 Response regulator receiver domain J165_00403 PF08338 Domain of unknown function (DUF1731) J165_00403 PF01370 NAD dependent epimerase/dehydratase family J165_00411 PF01139 tRNA-splicing ligase RtcB J165_00417 PF00440 Bacterial regulatory proteins, tetR family J165_00418 PF00175 Oxidoreductase NAD-binding domain J165_00418 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00418 PF00970 Oxidoreductase FAD-binding domain J165_00419 PF00487 Fatty acid desaturase J165_00420 PF00563 EAL domain J165_00420 PF12792 CSS motif domain associated with EAL J165_00423 PF01078 Magnesium chelatase, subunit ChlI J165_00423 PF13335 Magnesium chelatase, subunit ChlI C-terminal J165_00424 PF04380 Membrane fusogenic activity J165_00425 PF00543 Nitrogen regulatory protein P-II J165_00430 PF17284 Spermidine synthase tetramerisation domain J165_00431 PF17944 Arginine decarboxylase C-terminal helical extension J165_00431 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J165_00431 PF17810 Arginine decarboxylase helical bundle domain J165_00432 PF00501 AMP-binding enzyme J165_00432 PF13193 AMP-binding enzyme C-terminal domain J165_00432 PF00668 Condensation domain J165_00432 PF00550 Phosphopantetheine attachment site J165_00432 PF00975 Thioesterase domain J165_00433 PF03033 Glycosyltransferase family 28 N-terminal domain J165_00434 PF01757 Acyltransferase family J165_00435 PF00106 short chain dehydrogenase J165_00438 PF00750 tRNA synthetases class I (R) J165_00438 PF05746 DALR anticodon binding domain J165_00438 PF03485 Arginyl tRNA synthetase N terminal domain J165_00439 PF04002 RadC-like JAB domain J165_00440 PF02441 Flavoprotein J165_00440 PF04127 DNA / pantothenate metabolism flavoprotein J165_00441 PF00692 dUTPase J165_00442 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_00442 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_00442 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_00442 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_00445 PF00535 Glycosyl transferase family 2 J165_00446 PF01370 NAD dependent epimerase/dehydratase family J165_00448 PF02195 ParB-like nuclease domain J165_00448 PF17762 HTH domain found in ParB protein J165_00449 PF13614 AAA domain J165_00451 PF00156 Phosphoribosyl transferase domain J165_00452 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00453 PF07690 Major Facilitator Superfamily J165_00455 PF03702 Anhydro-N-acetylmuramic acid kinase J165_00456 PF04225 Opacity-associated protein A LysM-like domain J165_00456 PF01551 Peptidase family M23 J165_00457 PF00579 tRNA synthetases class I (W and Y) J165_00464 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J165_00464 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_00464 PF06827 Zinc finger found in FPG and IleRS J165_00466 PF04349 Periplasmic glucan biosynthesis protein, MdoG J165_00467 PF00360 Phytochrome region J165_00467 PF01590 GAF domain J165_00467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00467 PF08446 PAS fold J165_00467 PF00512 His Kinase A (phospho-acceptor) domain J165_00468 PF00265 Thymidine kinase J165_00469 PF00580 UvrD/REP helicase N-terminal domain J165_00469 PF13361 UvrD-like helicase C-terminal domain J165_00472 PF04337 Protein of unknown function, DUF480 J165_00474 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J165_00475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J165_00476 PF04820 Tryptophan halogenase J165_00479 PF00356 Bacterial regulatory proteins, lacI family J165_00481 PF01553 Acyltransferase J165_00482 PF14765 Polyketide synthase dehydratase J165_00482 PF00550 Phosphopantetheine attachment site J165_00482 PF08659 KR domain J165_00482 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_00482 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_00482 PF16197 Ketoacyl-synthetase C-terminal extension J165_00482 PF00107 Zinc-binding dehydrogenase J165_00482 PF08240 Alcohol dehydrogenase GroES-like domain J165_00482 PF00698 Acyl transferase domain J165_00486 PF00665 Integrase core domain J165_00486 PF02796 Helix-turn-helix domain of resolvase J165_00487 PF01695 IstB-like ATP binding protein J165_00488 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00489 PF00107 Zinc-binding dehydrogenase J165_00489 PF08240 Alcohol dehydrogenase GroES-like domain J165_00490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J165_00490 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_00491 PF04898 Glutamate synthase central domain J165_00491 PF01493 GXGXG motif J165_00491 PF00310 Glutamine amidotransferases class-II J165_00491 PF01645 Conserved region in glutamate synthase J165_00495 PF01804 Penicillin amidase J165_00497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00497 PF03466 LysR substrate binding domain J165_00500 PF02397 Bacterial sugar transferase J165_00501 PF02350 UDP-N-acetylglucosamine 2-epimerase J165_00503 PF03808 Glycosyl transferase WecB/TagA/CpsF family J165_00504 PF13439 Glycosyltransferase Family 4 J165_00504 PF00534 Glycosyl transferases group 1 J165_00510 PF13537 Glutamine amidotransferase domain J165_00510 PF00733 Asparagine synthase J165_00513 PF16363 GDP-mannose 4,6 dehydratase J165_00516 PF00664 ABC transporter transmembrane region J165_00516 PF00005 ABC transporter J165_00518 PF13537 Glutamine amidotransferase domain J165_00518 PF00733 Asparagine synthase J165_00523 PF00685 Sulfotransferase domain J165_00540 PF00270 DEAD/DEAH box helicase J165_00540 PF09369 Domain of unknown function (DUF1998) J165_00540 PF00271 Helicase conserved C-terminal domain J165_00541 PF03006 Haemolysin-III related J165_00544 PF00106 short chain dehydrogenase J165_00546 PF03466 LysR substrate binding domain J165_00546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00550 PF02525 Flavodoxin-like fold J165_00552 PF01527 Transposase J165_00553 PF13276 HTH-like domain J165_00553 PF00665 Integrase core domain J165_00553 PF13333 Integrase core domain J165_00561 PF05532 CsbD-like J165_00565 PF16485 Protealysin propeptide J165_00565 PF02868 Thermolysin metallopeptidase, alpha-helical domain J165_00565 PF01447 Thermolysin metallopeptidase, catalytic domain J165_00567 PF13344 Haloacid dehalogenase-like hydrolase J165_00567 PF00293 NUDIX domain J165_00570 PF00085 Thioredoxin J165_00571 PF00083 Sugar (and other) transporter J165_00571 PF08946 Osmosensory transporter coiled coil J165_00579 PF07726 ATPase family associated with various cellular activities (AAA) J165_00579 PF17863 AAA lid domain J165_00585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J165_00586 PF00155 Aminotransferase class I and II J165_00587 PF07715 TonB-dependent Receptor Plug Domain J165_00587 PF00593 TonB dependent receptor J165_00589 PF07883 Cupin domain J165_00590 PF00171 Aldehyde dehydrogenase family J165_00594 PF02735 Ku70/Ku80 beta-barrel domain J165_00595 PF01070 FMN-dependent dehydrogenase J165_00596 PF00144 Beta-lactamase J165_00597 PF07730 Histidine kinase J165_00598 PF00196 Bacterial regulatory proteins, luxR family J165_00598 PF00072 Response regulator receiver domain J165_00602 PF18500 CadC C-terminal domain 1 J165_00602 PF00486 Transcriptional regulatory protein, C terminal J165_00603 PF07055 Enoyl reductase FAD binding domain J165_00603 PF12241 Trans-2-enoyl-CoA reductase catalytic region J165_00603 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J165_00605 PF00294 pfkB family carbohydrate kinase J165_00617 PF01527 Transposase J165_00618 PF00665 Integrase core domain J165_00618 PF13333 Integrase core domain J165_00618 PF13276 HTH-like domain J165_00619 PF00128 Alpha amylase, catalytic domain J165_00619 PF11896 Domain of unknown function (DUF3416) J165_00620 PF00128 Alpha amylase, catalytic domain J165_00620 PF16657 Maltogenic Amylase, C-terminal domain J165_00621 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00621 PF00128 Alpha amylase, catalytic domain J165_00621 PF02806 Alpha amylase, C-terminal all-beta domain J165_00623 PF00248 Aldo/keto reductase family J165_00624 PF00135 Carboxylesterase family J165_00625 PF13472 GDSL-like Lipase/Acylhydrolase family J165_00625 PF07859 alpha/beta hydrolase fold J165_00627 PF03480 Bacterial extracellular solute-binding protein, family 7 J165_00629 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J165_00630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J165_00630 PF04616 Glycosyl hydrolases family 43 J165_00631 PF00356 Bacterial regulatory proteins, lacI family J165_00632 PF04962 KduI/IolB family J165_00635 PF00657 GDSL-like Lipase/Acylhydrolase J165_00639 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J165_00640 PF01037 Lrp/AsnC ligand binding domain J165_00641 PF07660 Secretin and TonB N terminus short domain J165_00641 PF00593 TonB dependent receptor J165_00641 PF07715 TonB-dependent Receptor Plug Domain J165_00642 PF01734 Patatin-like phospholipase J165_00644 PF00005 ABC transporter J165_00647 PF00005 ABC transporter J165_00648 PF00528 Binding-protein-dependent transport system inner membrane component J165_00650 PF12867 DinB superfamily J165_00650 PF03781 Sulfatase-modifying factor enzyme 1 J165_00653 PF01381 Helix-turn-helix J165_00657 PF10609 NUBPL iron-transfer P-loop NTPase J165_00657 PF01883 Iron-sulfur cluster assembly protein J165_00660 PF13091 PLD-like domain J165_00661 PF03061 Thioesterase superfamily J165_00669 PF02673 Bacitracin resistance protein BacA J165_00670 PF03951 Glutamine synthetase, beta-Grasp domain J165_00670 PF00120 Glutamine synthetase, catalytic domain J165_00671 PF00543 Nitrogen regulatory protein P-II J165_00672 PF00909 Ammonium Transporter Family J165_00673 PF00512 His Kinase A (phospho-acceptor) domain J165_00673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00673 PF00989 PAS fold J165_00674 PF00158 Sigma-54 interaction domain J165_00674 PF02954 Bacterial regulatory protein, Fis family J165_00674 PF00072 Response regulator receiver domain J165_00675 PF00080 Copper/zinc superoxide dismutase (SODC) J165_00676 PF00080 Copper/zinc superoxide dismutase (SODC) J165_00679 PF00108 Thiolase, N-terminal domain J165_00679 PF02803 Thiolase, C-terminal domain J165_00686 PF00581 Rhodanese-like domain J165_00687 PF02556 Preprotein translocase subunit SecB J165_00688 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J165_00688 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J165_00690 PF00205 Thiamine pyrophosphate enzyme, central domain J165_00690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J165_00690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J165_00691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00692 PF02954 Bacterial regulatory protein, Fis family J165_00692 PF00158 Sigma-54 interaction domain J165_00692 PF00072 Response regulator receiver domain J165_00695 PF07690 Major Facilitator Superfamily J165_00696 PF00588 SpoU rRNA Methylase family J165_00699 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_00699 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_00700 PF13784 Fic/DOC family N-terminal J165_00700 PF02661 Fic/DOC family J165_00701 PF13784 Fic/DOC family N-terminal J165_00701 PF02661 Fic/DOC family J165_00702 PF00561 alpha/beta hydrolase fold J165_00703 PF03692 Putative zinc- or iron-chelating domain J165_00704 PF00501 AMP-binding enzyme J165_00706 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J165_00708 PF01820 D-ala D-ala ligase N-terminus J165_00708 PF07478 D-ala D-ala ligase C-terminus J165_00710 PF03109 ABC1 family J165_00712 PF00849 RNA pseudouridylate synthase J165_00714 PF00472 RF-1 domain J165_00716 PF01112 Asparaginase J165_00717 PF01432 Peptidase family M3 J165_00718 PF12706 Beta-lactamase superfamily domain J165_00721 PF12833 Helix-turn-helix domain J165_00722 PF00999 Sodium/hydrogen exchanger family J165_00723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00723 PF03466 LysR substrate binding domain J165_00724 PF01274 Malate synthase J165_00725 PF00463 Isocitrate lyase family J165_00726 PF00990 Diguanylate cyclase, GGDEF domain J165_00730 PF00326 Prolyl oligopeptidase family J165_00731 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_00731 PF02785 Biotin carboxylase C-terminal domain J165_00731 PF00289 Biotin carboxylase, N-terminal domain J165_00731 PF00364 Biotin-requiring enzyme J165_00732 PF01039 Carboxyl transferase domain J165_00733 PF02770 Acyl-CoA dehydrogenase, middle domain J165_00733 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_00733 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_00744 PF07683 Cobalamin synthesis protein cobW C-terminal domain J165_00744 PF02492 CobW/HypB/UreG, nucleotide-binding domain J165_00748 PF03969 AFG1-like ATPase J165_00749 PF01047 MarR family J165_00750 PF02566 OsmC-like protein J165_00755 PF00107 Zinc-binding dehydrogenase J165_00755 PF16884 N-terminal domain of oxidoreductase J165_00758 PF00849 RNA pseudouridylate synthase J165_00760 PF00593 TonB dependent receptor J165_00762 PF00270 DEAD/DEAH box helicase J165_00762 PF04408 Helicase associated domain (HA2) J165_00762 PF00271 Helicase conserved C-terminal domain J165_00762 PF08482 ATP-dependent helicase C-terminal J165_00763 PF07308 Protein of unknown function (DUF1456) J165_00764 PF00576 HIUase/Transthyretin family J165_00765 PF13454 FAD-NAD(P)-binding J165_00766 PF09349 OHCU decarboxylase J165_00766 PF01014 Uricase J165_00769 PF00266 Aminotransferase class-V J165_00770 PF07687 Peptidase dimerisation domain J165_00770 PF01546 Peptidase family M20/M25/M40 J165_00771 PF03466 LysR substrate binding domain J165_00771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00772 PF07690 Major Facilitator Superfamily J165_00775 PF01425 Amidase J165_00776 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_00778 PF00860 Permease family J165_00779 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00780 PF00355 Rieske [2Fe-2S] domain J165_00781 PF03466 LysR substrate binding domain J165_00781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00782 PF01026 TatD related DNase J165_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00785 PF03466 LysR substrate binding domain J165_00786 PF07690 Major Facilitator Superfamily J165_00788 PF00561 alpha/beta hydrolase fold J165_00789 PF02146 Sir2 family J165_00790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_00791 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_00791 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_00793 PF00551 Formyl transferase J165_00794 PF00486 Transcriptional regulatory protein, C terminal J165_00794 PF00072 Response regulator receiver domain J165_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00795 PF00672 HAMP domain J165_00795 PF00512 His Kinase A (phospho-acceptor) domain J165_00796 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_00796 PF00529 HlyD membrane-fusion protein of T1SS J165_00797 PF00873 AcrB/AcrD/AcrF family J165_00798 PF02321 Outer membrane efflux protein J165_00800 PF02219 Methylenetetrahydrofolate reductase J165_00801 PF02677 Epoxyqueuosine reductase QueH J165_00802 PF03466 LysR substrate binding domain J165_00802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00803 PF03358 NADPH-dependent FMN reductase J165_00805 PF01717 Cobalamin-independent synthase, Catalytic domain J165_00805 PF08267 Cobalamin-independent synthase, N-terminal domain J165_00806 PF03812 2-keto-3-deoxygluconate permease J165_00808 PF05368 NmrA-like family J165_00809 PF01638 HxlR-like helix-turn-helix J165_00813 PF13333 Integrase core domain J165_00813 PF13276 HTH-like domain J165_00813 PF00665 Integrase core domain J165_00814 PF01527 Transposase J165_00815 PF13495 Phage integrase, N-terminal SAM-like domain J165_00815 PF00589 Phage integrase family J165_00816 PF00920 Dehydratase family J165_00819 PF00132 Bacterial transferase hexapeptide (six repeats) J165_00820 PF07690 Major Facilitator Superfamily J165_00821 PF01966 HD domain J165_00821 PF11871 Domain of unknown function (DUF3391) J165_00825 PF00171 Aldehyde dehydrogenase family J165_00827 PF01494 FAD binding domain J165_00830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_00830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_00831 PF00230 Major intrinsic protein J165_00832 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J165_00832 PF01266 FAD dependent oxidoreductase J165_00833 PF08220 DeoR-like helix-turn-helix domain J165_00833 PF00455 DeoR C terminal sensor domain J165_00835 PF00355 Rieske [2Fe-2S] domain J165_00836 PF01144 Coenzyme A transferase J165_00837 PF01144 Coenzyme A transferase J165_00838 PF02803 Thiolase, C-terminal domain J165_00838 PF00108 Thiolase, N-terminal domain J165_00839 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J165_00839 PF00775 Dioxygenase J165_00841 PF10397 Adenylosuccinate lyase C-terminus J165_00841 PF00206 Lyase J165_00842 PF12146 Serine aminopeptidase, S33 J165_00843 PF02627 Carboxymuconolactone decarboxylase family J165_00845 PF09339 IclR helix-turn-helix domain J165_00845 PF01614 Bacterial transcriptional regulator J165_00847 PF07859 alpha/beta hydrolase fold J165_00848 PF10677 Protein of unknown function (DUF2490) J165_00849 PF01134 Glucose inhibited division protein A J165_00849 PF13932 GidA associated domain J165_00851 PF00291 Pyridoxal-phosphate dependent enzyme J165_00855 PF13649 Methyltransferase domain J165_00857 PF12697 Alpha/beta hydrolase family J165_00859 PF00155 Aminotransferase class I and II J165_00860 PF06968 Biotin and Thiamin Synthesis associated domain J165_00860 PF04055 Radical SAM superfamily J165_00862 PF01040 UbiA prenyltransferase family J165_00866 PF05819 NolX protein J165_00874 PF01313 Bacterial export proteins, family 3 J165_00875 PF00813 FliP family J165_00878 PF00771 FHIPEP family J165_00879 PF01312 FlhB HrpN YscU SpaS Family J165_00882 PF01514 Secretory protein of YscJ/FliF family J165_00885 PF18269 T3SS EscN ATPase C-terminal domain J165_00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_00887 PF01311 Bacterial export proteins, family 1 J165_00890 PF01464 Transglycosylase SLT domain J165_00893 PF00924 Mechanosensitive ion channel J165_00893 PF12794 Mechanosensitive ion channel inner membrane domain 1 J165_00893 PF12795 Mechanosensitive ion channel porin domain J165_00894 PF00884 Sulfatase J165_00895 PF03109 ABC1 family J165_00896 PF03109 ABC1 family J165_00897 PF05661 Protein of unknown function (DUF808) J165_00898 PF00072 Response regulator receiver domain J165_00898 PF00990 Diguanylate cyclase, GGDEF domain J165_00899 PF00534 Glycosyl transferases group 1 J165_00899 PF08323 Starch synthase catalytic domain J165_00900 PF00128 Alpha amylase, catalytic domain J165_00900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00900 PF02806 Alpha amylase, C-terminal all-beta domain J165_00901 PF11941 Domain of unknown function (DUF3459) J165_00901 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00901 PF00128 Alpha amylase, catalytic domain J165_00902 PF02446 4-alpha-glucanotransferase J165_00903 PF00128 Alpha amylase, catalytic domain J165_00905 PF00128 Alpha amylase, catalytic domain J165_00905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00906 PF13460 NAD(P)H-binding J165_00909 PF06903 VirK protein J165_00910 PF02321 Outer membrane efflux protein J165_00913 PF00873 AcrB/AcrD/AcrF family J165_00916 PF00271 Helicase conserved C-terminal domain J165_00916 PF00270 DEAD/DEAH box helicase J165_00918 PF02817 e3 binding domain J165_00918 PF00364 Biotin-requiring enzyme J165_00918 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_00920 PF02779 Transketolase, pyrimidine binding domain J165_00920 PF02780 Transketolase, C-terminal domain J165_00921 PF00676 Dehydrogenase E1 component J165_00923 PF03301 Tryptophan 2,3-dioxygenase J165_00924 PF00854 POT family J165_00926 PF01047 MarR family J165_00927 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_00928 PF04209 homogentisate 1,2-dioxygenase J165_00931 PF03334 Na+/H+ antiporter subunit J165_00932 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J165_00934 PF00361 Proton-conducting membrane transporter J165_00935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J165_00936 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J165_00936 PF13244 Domain of unknown function (DUF4040) J165_00936 PF00361 Proton-conducting membrane transporter J165_00936 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_00939 PF02868 Thermolysin metallopeptidase, alpha-helical domain J165_00939 PF01447 Thermolysin metallopeptidase, catalytic domain J165_00939 PF01483 Proprotein convertase P-domain J165_00939 PF07504 Fungalysin/Thermolysin Propeptide Motif J165_00941 PF00182 Chitinase class I J165_00945 PF01259 SAICAR synthetase J165_00946 PF00226 DnaJ domain J165_00946 PF05099 Tellurite resistance protein TerB J165_00948 PF00834 Ribulose-phosphate 3 epimerase family J165_00950 PF00781 Diacylglycerol kinase catalytic domain J165_00951 PF04715 Anthranilate synthase component I, N terminal region J165_00951 PF00425 chorismate binding enzyme J165_00953 PF00117 Glutamine amidotransferase class-I J165_00955 PF02885 Glycosyl transferase family, helical bundle domain J165_00955 PF00591 Glycosyl transferase family, a/b domain J165_00956 PF00218 Indole-3-glycerol phosphate synthase J165_00958 PF00325 Bacterial regulatory proteins, crp family J165_00958 PF00027 Cyclic nucleotide-binding domain J165_00959 PF02675 S-adenosylmethionine decarboxylase J165_00960 PF00893 Small Multidrug Resistance protein J165_00961 PF03232 Ubiquinone biosynthesis protein COQ7 J165_00962 PF00572 Ribosomal protein L13 J165_00963 PF00380 Ribosomal protein S9/S16 J165_00966 PF00293 NUDIX domain J165_00967 PF00210 Ferritin-like domain J165_00968 PF00072 Response regulator receiver domain J165_00968 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J165_00968 PF00512 His Kinase A (phospho-acceptor) domain J165_00968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00968 PF01627 Hpt domain J165_00968 PF00672 HAMP domain J165_00969 PF00486 Transcriptional regulatory protein, C terminal J165_00969 PF00072 Response regulator receiver domain J165_00973 PF01521 Iron-sulphur cluster biosynthesis J165_00975 PF00293 NUDIX domain J165_00975 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J165_00975 PF09297 NADH pyrophosphatase zinc ribbon domain J165_00976 PF03186 CobD/Cbib protein J165_00976 PF17113 Regulatory signalling modulator protein AmpE J165_00979 PF07690 Major Facilitator Superfamily J165_00980 PF03466 LysR substrate binding domain J165_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00981 PF07690 Major Facilitator Superfamily J165_00982 PF12805 FUSC-like inner membrane protein yccS J165_00983 PF02844 Phosphoribosylglycinamide synthetase, N domain J165_00983 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J165_00983 PF02843 Phosphoribosylglycinamide synthetase, C domain J165_00985 PF01808 AICARFT/IMPCHase bienzyme J165_00985 PF02142 MGS-like domain J165_00986 PF01066 CDP-alcohol phosphatidyltransferase J165_00987 PF12147 Putative methyltransferase J165_00987 PF12146 Serine aminopeptidase, S33 J165_00988 PF00782 Dual specificity phosphatase, catalytic domain J165_00994 PF02954 Bacterial regulatory protein, Fis family J165_00997 PF01381 Helix-turn-helix J165_01003 PF00289 Biotin carboxylase, N-terminal domain J165_01003 PF02785 Biotin carboxylase C-terminal domain J165_01003 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_01005 PF00364 Biotin-requiring enzyme J165_01006 PF01220 Dehydroquinase class II J165_01007 PF02683 Cytochrome C biogenesis protein transmembrane region J165_01007 PF11412 Disulphide bond corrector protein DsbC J165_01008 PF03091 CutA1 divalent ion tolerance protein J165_01011 PF01852 START domain J165_01013 PF00106 short chain dehydrogenase J165_01014 PF04231 Endonuclease I J165_01015 PF00166 Chaperonin 10 Kd subunit J165_01016 PF00118 TCP-1/cpn60 chaperonin family J165_01018 PF07715 TonB-dependent Receptor Plug Domain J165_01018 PF00593 TonB dependent receptor J165_01019 PF00793 DAHP synthetase I family J165_01022 PF08450 SMP-30/Gluconolactonase/LRE-like region J165_01024 PF08335 GlnD PII-uridylyltransferase J165_01024 PF03710 Glutamate-ammonia ligase adenylyltransferase J165_01025 PF02592 Putative vitamin uptake transporter J165_01028 PF00881 Nitroreductase family J165_01029 PF04264 YceI-like domain J165_01033 PF16957 Malonate decarboxylase, alpha subunit, transporter J165_01034 PF06857 Malonate decarboxylase delta subunit (MdcD) J165_01035 PF01039 Carboxyl transferase domain J165_01037 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J165_01038 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J165_01040 PF00698 Acyl transferase domain J165_01042 PF00392 Bacterial regulatory proteins, gntR family J165_01042 PF07729 FCD domain J165_01043 PF13419 Haloacid dehalogenase-like hydrolase J165_01049 PF07745 Glycosyl hydrolase family 53 J165_01050 PF17831 Pyruvate dehydrogenase E1 component middle domain J165_01050 PF00456 Transketolase, thiamine diphosphate binding domain J165_01051 PF00665 Integrase core domain J165_01051 PF13276 HTH-like domain J165_01051 PF13333 Integrase core domain J165_01052 PF01527 Transposase J165_01053 PF00106 short chain dehydrogenase J165_01056 PF00106 short chain dehydrogenase J165_01058 PF13409 Glutathione S-transferase, N-terminal domain J165_01064 PF01527 Transposase J165_01065 PF13333 Integrase core domain J165_01065 PF00665 Integrase core domain J165_01065 PF13276 HTH-like domain J165_01067 PF01433 Peptidase family M1 domain J165_01067 PF11838 ERAP1-like C-terminal domain J165_01069 PF00588 SpoU rRNA Methylase family J165_01069 PF08032 RNA 2'-O ribose methyltransferase substrate binding J165_01070 PF00135 Carboxylesterase family J165_01072 PF10566 Glycoside hydrolase 97 J165_01072 PF14508 Glycosyl-hydrolase 97 N-terminal J165_01072 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J165_01073 PF00703 Glycosyl hydrolases family 2 J165_01073 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_01073 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J165_01075 PF00356 Bacterial regulatory proteins, lacI family J165_01077 PF01741 Large-conductance mechanosensitive channel, MscL J165_01078 PF01557 Fumarylacetoacetate (FAA) hydrolase family J165_01081 PF02080 TrkA-C domain J165_01081 PF03600 Citrate transporter J165_01082 PF02390 Putative methyltransferase J165_01083 PF05690 Thiazole biosynthesis protein ThiG J165_01085 PF03797 Autotransporter beta-domain J165_01085 PF00657 GDSL-like Lipase/Acylhydrolase J165_01090 PF03527 RHS protein J165_01090 PF05593 RHS Repeat J165_01096 PF05973 Phage derived protein Gp49-like (DUF891) J165_01104 PF04002 RadC-like JAB domain J165_01110 PF01555 DNA methylase J165_01115 PF02796 Helix-turn-helix domain of resolvase J165_01115 PF00665 Integrase core domain J165_01116 PF01695 IstB-like ATP binding protein J165_01126 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_01126 PF00128 Alpha amylase, catalytic domain J165_01127 PF08443 RimK-like ATP-grasp domain J165_01127 PF18030 RimK PreATP-grasp domain J165_01128 PF18030 RimK PreATP-grasp domain J165_01128 PF08443 RimK-like ATP-grasp domain J165_01130 PF00486 Transcriptional regulatory protein, C terminal J165_01130 PF00072 Response regulator receiver domain J165_01131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01131 PF00989 PAS fold J165_01131 PF00512 His Kinase A (phospho-acceptor) domain J165_01131 PF16736 Single Cache-like J165_01132 PF00665 Integrase core domain J165_01132 PF13276 HTH-like domain J165_01132 PF13333 Integrase core domain J165_01133 PF01527 Transposase J165_01136 PF01121 Dephospho-CoA kinase J165_01137 PF06750 Bacterial Peptidase A24 N-terminal domain J165_01137 PF01478 Type IV leader peptidase family J165_01138 PF00482 Type II secretion system (T2SS), protein F J165_01139 PF00114 Pilin (bacterial filament) J165_01139 PF07963 Prokaryotic N-terminal methylation motif J165_01140 PF00114 Pilin (bacterial filament) J165_01140 PF07963 Prokaryotic N-terminal methylation motif J165_01141 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_01141 PF00437 Type II/IV secretion system protein J165_01142 PF00437 Type II/IV secretion system protein J165_01142 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_01144 PF00158 Sigma-54 interaction domain J165_01144 PF02954 Bacterial regulatory protein, Fis family J165_01144 PF00072 Response regulator receiver domain J165_01145 PF00512 His Kinase A (phospho-acceptor) domain J165_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01146 PF08442 ATP-grasp domain J165_01146 PF00549 CoA-ligase J165_01147 PF00549 CoA-ligase J165_01147 PF02629 CoA binding domain J165_01152 PF01129 NAD:arginine ADP-ribosyltransferase J165_01154 PF02796 Helix-turn-helix domain of resolvase J165_01154 PF00665 Integrase core domain J165_01165 PF01527 Transposase J165_01166 PF13333 Integrase core domain J165_01166 PF00665 Integrase core domain J165_01166 PF13276 HTH-like domain J165_01201 PF00158 Sigma-54 interaction domain J165_01201 PF00072 Response regulator receiver domain J165_01201 PF02954 Bacterial regulatory protein, Fis family J165_01202 PF00072 Response regulator receiver domain J165_01202 PF13426 PAS domain J165_01202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01217 PF01695 IstB-like ATP binding protein J165_01219 PF11799 impB/mucB/samB family C-terminal domain J165_01219 PF11798 IMS family HHH motif J165_01219 PF00817 impB/mucB/samB family J165_01219 PF13438 Domain of unknown function (DUF4113) J165_01220 PF00717 Peptidase S24-like J165_01221 PF00072 Response regulator receiver domain J165_01221 PF01339 CheB methylesterase J165_01222 PF00512 His Kinase A (phospho-acceptor) domain J165_01222 PF00989 PAS fold J165_01222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01225 PF05698 Bacterial trigger factor protein (TF) C-terminus J165_01225 PF05697 Bacterial trigger factor protein (TF) J165_01226 PF00574 Clp protease J165_01227 PF07724 AAA domain (Cdc48 subfamily) J165_01227 PF10431 C-terminal, D2-small domain, of ClpB protein J165_01227 PF06689 ClpX C4-type zinc finger J165_01228 PF02190 ATP-dependent protease La (LON) substrate-binding domain J165_01228 PF05362 Lon protease (S16) C-terminal proteolytic domain J165_01228 PF00004 ATPase family associated with various cellular activities (AAA) J165_01229 PF00216 Bacterial DNA-binding protein J165_01235 PF05257 CHAP domain J165_01235 PF01476 LysM domain J165_01236 PF00753 Metallo-beta-lactamase superfamily J165_01236 PF16123 Hydroxyacylglutathione hydrolase C-terminus J165_01238 PF00075 RNase H J165_01239 PF00929 Exonuclease J165_01243 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J165_01245 PF12706 Beta-lactamase superfamily domain J165_01245 PF00753 Metallo-beta-lactamase superfamily J165_01246 PF06463 Molybdenum Cofactor Synthesis C J165_01246 PF04055 Radical SAM superfamily J165_01247 PF01967 MoaC family J165_01248 PF02597 ThiS family J165_01249 PF02391 MoaE protein J165_01252 PF01527 Transposase J165_01253 PF13276 HTH-like domain J165_01253 PF00665 Integrase core domain J165_01253 PF13333 Integrase core domain J165_01259 PF12169 DNA polymerase III subunits gamma and tau domain III J165_01259 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J165_01259 PF12170 DNA polymerase III tau subunit V interacting with alpha J165_01260 PF02575 YbaB/EbfC DNA-binding family J165_01261 PF13662 Toprim domain J165_01261 PF02132 RecR protein J165_01262 PF01230 HIT domain J165_01264 PF11992 Domain of unknown function (DUF3488) J165_01264 PF01841 Transglutaminase-like superfamily J165_01264 PF13559 Domain of unknown function (DUF4129) J165_01266 PF17863 AAA lid domain J165_01266 PF07726 ATPase family associated with various cellular activities (AAA) J165_01271 PF02545 Maf-like protein J165_01272 PF02620 Large ribosomal RNA subunit accumulation protein YceD J165_01273 PF01783 Ribosomal L32p protein family J165_01274 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_01274 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_01276 PF00698 Acyl transferase domain J165_01278 PF00550 Phosphopantetheine attachment site J165_01279 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_01279 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_01280 PF00425 chorismate binding enzyme J165_01280 PF04715 Anthranilate synthase component I, N terminal region J165_01281 PF02618 YceG-like family J165_01282 PF09115 DNA polymerase III, delta subunit, C terminal J165_01286 PF00158 Sigma-54 interaction domain J165_01286 PF06506 Propionate catabolism activator J165_01286 PF02954 Bacterial regulatory protein, Fis family J165_01288 PF00285 Citrate synthase, C-terminal domain J165_01289 PF00330 Aconitase family (aconitate hydratase) J165_01289 PF00694 Aconitase C-terminal domain J165_01290 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J165_01292 PF04303 PrpF protein J165_01293 PF00593 TonB dependent receptor J165_01293 PF07715 TonB-dependent Receptor Plug Domain J165_01295 PF01835 MG2 domain J165_01295 PF17962 Bacterial macroglobulin domain 6 J165_01295 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J165_01295 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J165_01295 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J165_01295 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J165_01295 PF07703 Alpha-2-macroglobulin bait region domain J165_01295 PF00207 Alpha-2-macroglobulin family J165_01298 PF06832 Penicillin-Binding Protein C-terminus Family J165_01298 PF00912 Transglycosylase J165_01298 PF00905 Penicillin binding protein transpeptidase domain J165_01300 PF08534 Redoxin J165_01302 PF01556 DnaJ C terminal domain J165_01302 PF00226 DnaJ domain J165_01304 PF00072 Response regulator receiver domain J165_01306 PF01145 SPFH domain / Band 7 family J165_01306 PF12221 Bacterial membrane protein N terminal J165_01307 PF01145 SPFH domain / Band 7 family J165_01310 PF00709 Adenylosuccinate synthetase J165_01311 PF01433 Peptidase family M1 domain J165_01311 PF11838 ERAP1-like C-terminal domain J165_01314 PF00440 Bacterial regulatory proteins, tetR family J165_01327 PF13456 Reverse transcriptase-like J165_01327 PF00300 Histidine phosphatase superfamily (branch 1) J165_01328 PF01256 Carbohydrate kinase J165_01330 PF00723 Glycosyl hydrolases family 15 J165_01332 PF17678 Glycosyl hydrolase family 92 N-terminal domain J165_01332 PF07971 Glycosyl hydrolase family 92 J165_01336 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01340 PF17755 UvrA DNA-binding domain J165_01341 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_01341 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J165_01342 PF00941 FAD binding domain in molybdopterin dehydrogenase J165_01342 PF03450 CO dehydrogenase flavoprotein C-terminal domain J165_01343 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_01343 PF01799 [2Fe-2S] binding domain J165_01350 PF00717 Peptidase S24-like J165_01350 PF01726 LexA DNA binding domain J165_01353 PF07733 Bacterial DNA polymerase III alpha NTPase domain J165_01353 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J165_01353 PF14579 Helix-hairpin-helix motif J165_01353 PF02811 PHP domain J165_01354 PF00326 Prolyl oligopeptidase family J165_01356 PF03169 OPT oligopeptide transporter protein J165_01359 PF07676 WD40-like Beta Propeller Repeat J165_01359 PF00326 Prolyl oligopeptidase family J165_01359 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_01362 PF12833 Helix-turn-helix domain J165_01362 PF02311 AraC-like ligand binding domain J165_01367 PF02559 CarD-like/TRCF domain J165_01367 PF00271 Helicase conserved C-terminal domain J165_01367 PF00270 DEAD/DEAH box helicase J165_01367 PF17757 UvrB interaction domain J165_01367 PF03461 TRCF domain J165_01369 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J165_01370 PF00486 Transcriptional regulatory protein, C terminal J165_01370 PF00072 Response regulator receiver domain J165_01371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01371 PF00672 HAMP domain J165_01371 PF00512 His Kinase A (phospho-acceptor) domain J165_01373 PF06123 Inner membrane protein CreD J165_01378 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_01379 PF01475 Ferric uptake regulator family J165_01381 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_01381 PF00529 HlyD membrane-fusion protein of T1SS J165_01382 PF00873 AcrB/AcrD/AcrF family J165_01383 PF02321 Outer membrane efflux protein J165_01384 PF16859 Tetracyclin repressor-like, C-terminal domain J165_01384 PF00440 Bacterial regulatory proteins, tetR family J165_01386 PF06719 AraC-type transcriptional regulator N-terminus J165_01386 PF12833 Helix-turn-helix domain J165_01388 PF03466 LysR substrate binding domain J165_01388 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01389 PF07690 Major Facilitator Superfamily J165_01390 PF00248 Aldo/keto reductase family J165_01392 PF01483 Proprotein convertase P-domain J165_01392 PF00082 Subtilase family J165_01394 PF00082 Subtilase family J165_01394 PF01483 Proprotein convertase P-domain J165_01396 PF00593 TonB dependent receptor J165_01396 PF07715 TonB-dependent Receptor Plug Domain J165_01399 PF00107 Zinc-binding dehydrogenase J165_01399 PF08240 Alcohol dehydrogenase GroES-like domain J165_01400 PF00654 Voltage gated chloride channel J165_01402 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J165_01402 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J165_01412 PF03880 DbpA RNA binding domain J165_01412 PF00271 Helicase conserved C-terminal domain J165_01412 PF00270 DEAD/DEAH box helicase J165_01413 PF00990 Diguanylate cyclase, GGDEF domain J165_01413 PF00563 EAL domain J165_01413 PF08448 PAS fold J165_01414 PF00849 RNA pseudouridylate synthase J165_01414 PF01479 S4 domain J165_01415 PF00072 Response regulator receiver domain J165_01415 PF00990 Diguanylate cyclase, GGDEF domain J165_01418 PF03737 Aldolase/RraA J165_01419 PF00144 Beta-lactamase J165_01420 PF00999 Sodium/hydrogen exchanger family J165_01421 PF00672 HAMP domain J165_01421 PF00512 His Kinase A (phospho-acceptor) domain J165_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01422 PF00072 Response regulator receiver domain J165_01422 PF00486 Transcriptional regulatory protein, C terminal J165_01423 PF02321 Outer membrane efflux protein J165_01426 PF00873 AcrB/AcrD/AcrF family J165_01429 PF00664 ABC transporter transmembrane region J165_01429 PF00005 ABC transporter J165_01434 PF03466 LysR substrate binding domain J165_01434 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01436 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J165_01437 PF04070 Domain of unknown function (DUF378) J165_01442 PF00085 Thioredoxin J165_01444 PF13603 Leucyl-tRNA synthetase, Domain 2 J165_01444 PF08264 Anticodon-binding domain of tRNA J165_01444 PF00133 tRNA synthetases class I (I, L, M and V) J165_01447 PF01467 Cytidylyltransferase-like J165_01450 PF02590 Predicted SPOUT methyltransferase J165_01453 PF04402 Protein of unknown function (DUF541) J165_01454 PF02545 Maf-like protein J165_01455 PF00575 S1 RNA binding domain J165_01455 PF10150 Ribonuclease E/G family J165_01456 PF13116 Protein of unknown function J165_01456 PF13502 AsmA-like C-terminal region J165_01458 PF01523 Putative modulator of DNA gyrase J165_01459 PF04751 Protein of unknown function (DUF615) J165_01460 PF01523 Putative modulator of DNA gyrase J165_01462 PF14521 Lysine-specific metallo-endopeptidase J165_01463 PF00348 Polyprenyl synthetase J165_01464 PF02609 Exonuclease VII small subunit J165_01465 PF09179 TilS substrate binding domain J165_01465 PF01171 PP-loop family J165_01465 PF11734 TilS substrate C-terminal domain J165_01466 PF00245 Alkaline phosphatase J165_01467 PF00375 Sodium:dicarboxylate symporter family J165_01470 PF00877 NlpC/P60 family J165_01471 PF00877 NlpC/P60 family J165_01472 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_01473 PF04235 Protein of unknown function (DUF418) J165_01474 PF01266 FAD dependent oxidoreductase J165_01475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01476 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J165_01479 PF05649 Peptidase family M13 J165_01479 PF01431 Peptidase family M13 J165_01480 PF01431 Peptidase family M13 J165_01480 PF05649 Peptidase family M13 J165_01483 PF07715 TonB-dependent Receptor Plug Domain J165_01483 PF00593 TonB dependent receptor J165_01484 PF10609 NUBPL iron-transfer P-loop NTPase J165_01485 PF00692 dUTPase J165_01489 PF01738 Dienelactone hydrolase family J165_01490 PF18693 TRAM domain J165_01490 PF04055 Radical SAM superfamily J165_01490 PF00919 Uncharacterized protein family UPF0004 J165_01491 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_01491 PF03449 Transcription elongation factor, N-terminal J165_01494 PF00293 NUDIX domain J165_01495 PF05872 Bacterial protein of unknown function (DUF853) J165_01497 PF02666 Phosphatidylserine decarboxylase J165_01498 PF02630 SCO1/SenC J165_01499 PF05175 Methyltransferase small domain J165_01500 PF01264 Chorismate synthase J165_01501 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_01501 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_01502 PF02774 Semialdehyde dehydrogenase, dimerisation domain J165_01502 PF01118 Semialdehyde dehydrogenase, NAD binding domain J165_01506 PF01416 tRNA pseudouridine synthase J165_01507 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J165_01508 PF03466 LysR substrate binding domain J165_01508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01509 PF00291 Pyridoxal-phosphate dependent enzyme J165_01511 PF00290 Tryptophan synthase alpha chain J165_01512 PF17848 Acetyl-coA carboxylase zinc finger domain J165_01512 PF01039 Carboxyl transferase domain J165_01513 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_01513 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_01513 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_01513 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_01516 PF00563 EAL domain J165_01516 PF00990 Diguanylate cyclase, GGDEF domain J165_01516 PF03707 Bacterial signalling protein N terminal repeat J165_01519 PF00106 short chain dehydrogenase J165_01520 PF00121 Triosephosphate isomerase J165_01523 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J165_01524 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J165_01525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J165_01526 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J165_01528 PF10531 SLBB domain J165_01528 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J165_01528 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J165_01529 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J165_01529 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J165_01529 PF00384 Molybdopterin oxidoreductase J165_01530 PF00146 NADH dehydrogenase J165_01531 PF12838 4Fe-4S dicluster domain J165_01532 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J165_01533 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J165_01534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_01534 PF00361 Proton-conducting membrane transporter J165_01535 PF00361 Proton-conducting membrane transporter J165_01535 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J165_01536 PF00361 Proton-conducting membrane transporter J165_01538 PF17384 RimP C-terminal SH3 domain J165_01538 PF02576 RimP N-terminal domain J165_01539 PF08529 NusA N-terminal domain J165_01539 PF00575 S1 RNA binding domain J165_01539 PF13184 NusA-like KH domain J165_01540 PF04760 Translation initiation factor IF-2, N-terminal region J165_01540 PF11987 Translation-initiation factor 2 J165_01540 PF00009 Elongation factor Tu GTP binding domain J165_01540 PF08364 Bacterial translation initiation factor IF-2 associated region J165_01541 PF02033 Ribosome-binding factor A J165_01542 PF01509 TruB family pseudouridylate synthase (N terminal domain) J165_01542 PF09157 Pseudouridine synthase II TruB, C-terminal J165_01542 PF16198 tRNA pseudouridylate synthase B C-terminal domain J165_01543 PF00312 Ribosomal protein S15 J165_01544 PF03725 3' exoribonuclease family, domain 2 J165_01544 PF01138 3' exoribonuclease family, domain 1 J165_01544 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J165_01544 PF00013 KH domain J165_01544 PF00575 S1 RNA binding domain J165_01546 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J165_01546 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J165_01548 PF00731 AIR carboxylase J165_01549 PF02222 ATP-grasp domain J165_01549 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J165_01550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J165_01550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J165_01551 PF00462 Glutaredoxin J165_01553 PF01914 MarC family integral membrane protein J165_01554 PF00593 TonB dependent receptor J165_01555 PF11892 Domain of unknown function (DUF3412) J165_01555 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J165_01555 PF03641 Possible lysine decarboxylase J165_01556 PF06580 Histidine kinase J165_01556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01556 PF07694 5TMR of 5TMR-LYT J165_01560 PF05567 Neisseria PilC beta-propeller domain J165_01561 PF07963 Prokaryotic N-terminal methylation motif J165_01561 PF00114 Pilin (bacterial filament) J165_01562 PF01527 Transposase J165_01563 PF00665 Integrase core domain J165_01563 PF13333 Integrase core domain J165_01563 PF13276 HTH-like domain J165_01569 PF04002 RadC-like JAB domain J165_01570 PF05284 Protein of unknown function (DUF736) J165_01571 PF01381 Helix-turn-helix J165_01572 PF01527 Transposase J165_01573 PF13276 HTH-like domain J165_01573 PF00665 Integrase core domain J165_01573 PF13333 Integrase core domain J165_01574 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J165_01575 PF00361 Proton-conducting membrane transporter J165_01575 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J165_01575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_01576 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01576 PF03466 LysR substrate binding domain J165_01579 PF00072 Response regulator receiver domain J165_01579 PF00196 Bacterial regulatory proteins, luxR family J165_01582 PF00857 Isochorismatase family J165_01584 PF07969 Amidohydrolase family J165_01585 PF05977 Transmembrane secretion effector J165_01588 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_01588 PF14824 Sirohaem biosynthesis protein central J165_01588 PF10414 Sirohaem synthase dimerisation region J165_01590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_01592 PF05974 Domain of unknown function (DUF892) J165_01595 PF08447 PAS fold J165_01595 PF00563 EAL domain J165_01595 PF08448 PAS fold J165_01595 PF00990 Diguanylate cyclase, GGDEF domain J165_01596 PF12951 Passenger-associated-transport-repeat J165_01596 PF12951 Passenger-associated-transport-repeat J165_01597 PF00072 Response regulator receiver domain J165_01597 PF00196 Bacterial regulatory proteins, luxR family J165_01598 PF08448 PAS fold J165_01598 PF13426 PAS domain J165_01598 PF00512 His Kinase A (phospho-acceptor) domain J165_01598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01598 PF00072 Response regulator receiver domain J165_01600 PF00873 AcrB/AcrD/AcrF family J165_01601 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_01602 PF00082 Subtilase family J165_01602 PF03797 Autotransporter beta-domain J165_01604 PF07694 5TMR of 5TMR-LYT J165_01604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01604 PF06580 Histidine kinase J165_01605 PF04397 LytTr DNA-binding domain J165_01605 PF00072 Response regulator receiver domain J165_01606 PF00144 Beta-lactamase J165_01608 PF07995 Glucose / Sorbosone dehydrogenase J165_01609 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_01611 PF09335 SNARE associated Golgi protein J165_01612 PF01494 FAD binding domain J165_01613 PF01527 Transposase J165_01614 PF13333 Integrase core domain J165_01614 PF00665 Integrase core domain J165_01614 PF13276 HTH-like domain J165_01624 PF17091 Inovirus G7P protein J165_01630 PF00106 short chain dehydrogenase J165_01632 PF08241 Methyltransferase domain J165_01632 PF12697 Alpha/beta hydrolase family J165_01641 PF01106 NifU-like domain J165_01642 PF01329 Pterin 4 alpha carbinolamine dehydratase J165_01644 PF02535 ZIP Zinc transporter J165_01645 PF11737 Protein of unknown function (DUF3300) J165_01646 PF01479 S4 domain J165_01646 PF00849 RNA pseudouridylate synthase J165_01647 PF00575 S1 RNA binding domain J165_01647 PF12111 Polyribonucleotide phosphorylase C terminal J165_01647 PF10150 Ribonuclease E/G family J165_01648 PF00072 Response regulator receiver domain J165_01648 PF00196 Bacterial regulatory proteins, luxR family J165_01651 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_01653 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_01653 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_01653 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_01655 PF00589 Phage integrase family J165_01656 PF01527 Transposase J165_01657 PF13276 HTH-like domain J165_01657 PF00665 Integrase core domain J165_01657 PF13333 Integrase core domain J165_01658 PF01527 Transposase J165_01660 PF13193 AMP-binding enzyme C-terminal domain J165_01660 PF00668 Condensation domain J165_01660 PF00550 Phosphopantetheine attachment site J165_01660 PF00975 Thioesterase domain J165_01660 PF00501 AMP-binding enzyme J165_01661 PF13193 AMP-binding enzyme C-terminal domain J165_01661 PF00501 AMP-binding enzyme J165_01661 PF00550 Phosphopantetheine attachment site J165_01661 PF00668 Condensation domain J165_01664 PF05598 Transposase domain (DUF772) J165_01664 PF01609 Transposase DDE domain J165_01669 PF05598 Transposase domain (DUF772) J165_01669 PF01609 Transposase DDE domain J165_01670 PF00665 Integrase core domain J165_01670 PF02796 Helix-turn-helix domain of resolvase J165_01671 PF01695 IstB-like ATP binding protein J165_01672 PF01609 Transposase DDE domain J165_01672 PF05598 Transposase domain (DUF772) J165_01678 PF18337 RapA N-terminal Tudor like domain J165_01678 PF00176 SNF2 family N-terminal domain J165_01678 PF12137 RNA polymerase recycling family C-terminal J165_01678 PF00271 Helicase conserved C-terminal domain J165_01678 PF18339 RapA N-terminal Tudor like domain 1 J165_01679 PF01695 IstB-like ATP binding protein J165_01680 PF00665 Integrase core domain J165_01680 PF02796 Helix-turn-helix domain of resolvase J165_01681 PF12137 RNA polymerase recycling family C-terminal J165_01681 PF00271 Helicase conserved C-terminal domain J165_01681 PF18339 RapA N-terminal Tudor like domain 1 J165_01681 PF18337 RapA N-terminal Tudor like domain J165_01681 PF00176 SNF2 family N-terminal domain J165_01682 PF00145 C-5 cytosine-specific DNA methylase J165_01684 PF01695 IstB-like ATP binding protein J165_01685 PF00665 Integrase core domain J165_01685 PF02796 Helix-turn-helix domain of resolvase J165_01687 PF13614 AAA domain J165_01694 PF00436 Single-strand binding protein family J165_01695 PF01751 Toprim domain J165_01695 PF01131 DNA topoisomerase J165_01696 PF00145 C-5 cytosine-specific DNA methylase J165_01700 PF02021 Uncharacterised protein family UPF0102 J165_01708 PF00665 Integrase core domain J165_01708 PF13936 Helix-turn-helix domain J165_01736 PF04002 RadC-like JAB domain J165_01747 PF13340 Putative transposase of IS4/5 family (DUF4096) J165_01751 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J165_01756 PF13340 Putative transposase of IS4/5 family (DUF4096) J165_01758 PF05598 Transposase domain (DUF772) J165_01759 PF03466 LysR substrate binding domain J165_01759 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01760 PF01381 Helix-turn-helix J165_01763 PF01695 IstB-like ATP binding protein J165_01764 PF00665 Integrase core domain J165_01764 PF02796 Helix-turn-helix domain of resolvase J165_01765 PF13356 Arm DNA-binding domain J165_01765 PF00589 Phage integrase family J165_01767 PF01066 CDP-alcohol phosphatidyltransferase J165_01768 PF08459 UvrC Helix-hairpin-helix N-terminal J165_01768 PF01541 GIY-YIG catalytic domain J165_01768 PF02151 UvrB/uvrC motif J165_01770 PF01451 Low molecular weight phosphotyrosine protein phosphatase J165_01771 PF02348 Cytidylyltransferase J165_01772 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J165_01773 PF00664 ABC transporter transmembrane region J165_01773 PF00005 ABC transporter J165_01775 PF01618 MotA/TolQ/ExbB proton channel family J165_01776 PF00753 Metallo-beta-lactamase superfamily J165_01776 PF03772 Competence protein J165_01778 PF00005 ABC transporter J165_01779 PF02687 FtsX-like permease family J165_01779 PF12704 MacB-like periplasmic core domain J165_01781 PF03937 Flavinator of succinate dehydrogenase J165_01782 PF13085 2Fe-2S iron-sulfur cluster binding domain J165_01784 PF02910 Fumarate reductase flavoprotein C-term J165_01784 PF00890 FAD binding domain J165_01785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J165_01786 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J165_01789 PF17912 MalK OB fold domain J165_01789 PF00005 ABC transporter J165_01790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J165_01790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J165_01791 PF02685 Glucokinase J165_01792 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J165_01793 PF00920 Dehydratase family J165_01794 PF01081 KDPG and KHG aldolase J165_01795 PF00873 AcrB/AcrD/AcrF family J165_01796 PF00873 AcrB/AcrD/AcrF family J165_01797 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_01799 PF00034 Cytochrome c J165_01807 PF00512 His Kinase A (phospho-acceptor) domain J165_01807 PF09308 LuxQ, periplasmic J165_01807 PF00072 Response regulator receiver domain J165_01807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01808 PF09371 Tex-like protein N-terminal domain J165_01808 PF16921 Tex protein YqgF-like domain J165_01808 PF00575 S1 RNA binding domain J165_01808 PF17674 HHH domain J165_01810 PF01266 FAD dependent oxidoreductase J165_01810 PF00355 Rieske [2Fe-2S] domain J165_01813 PF00561 alpha/beta hydrolase fold J165_01815 PF01066 CDP-alcohol phosphatidyltransferase J165_01819 PF03618 Kinase/pyrophosphorylase J165_01820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J165_01820 PF02896 PEP-utilising enzyme, TIM barrel domain J165_01820 PF00391 PEP-utilising enzyme, mobile domain J165_01821 PF00924 Mechanosensitive ion channel J165_01821 PF05552 Conserved TM helix J165_01822 PF00929 Exonuclease J165_01823 PF14437 MafB19-like deaminase J165_01824 PF01325 Iron dependent repressor, N-terminal DNA binding domain J165_01824 PF02742 Iron dependent repressor, metal binding and dimerisation domain J165_01825 PF01566 Natural resistance-associated macrophage protein J165_01826 PF00561 alpha/beta hydrolase fold J165_01828 PF12804 MobA-like NTP transferase domain J165_01829 PF03453 MoeA N-terminal region (domain I and II) J165_01829 PF03454 MoeA C-terminal region (domain IV) J165_01829 PF00994 Probable molybdopterin binding domain J165_01831 PF03372 Endonuclease/Exonuclease/phosphatase family J165_01833 PF13823 Alcohol dehydrogenase GroES-associated J165_01833 PF00107 Zinc-binding dehydrogenase J165_01833 PF08240 Alcohol dehydrogenase GroES-like domain J165_01838 PF00899 ThiF family J165_01839 PF03453 MoeA N-terminal region (domain I and II) J165_01839 PF00994 Probable molybdopterin binding domain J165_01839 PF03454 MoeA C-terminal region (domain IV) J165_01840 PF01926 50S ribosome-binding GTPase J165_01840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J165_01841 PF01011 PQQ enzyme repeat J165_01841 PF13360 PQQ-like domain J165_01843 PF13464 Domain of unknown function (DUF4115) J165_01845 PF04055 Radical SAM superfamily J165_01846 PF00334 Nucleoside diphosphate kinase J165_01848 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J165_01848 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J165_01848 PF00378 Enoyl-CoA hydratase/isomerase J165_01849 PF00108 Thiolase, N-terminal domain J165_01849 PF02803 Thiolase, C-terminal domain J165_01851 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J165_01853 PF00004 ATPase family associated with various cellular activities (AAA) J165_01853 PF16193 AAA C-terminal domain J165_01853 PF12002 MgsA AAA+ ATPase C terminal J165_01855 PF03548 Outer membrane lipoprotein carrier protein LolA J165_01857 PF09397 Ftsk gamma domain J165_01857 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J165_01857 PF01580 FtsK/SpoIIIE family J165_01857 PF17854 FtsK alpha domain J165_01858 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J165_01861 PF01176 Translation initiation factor 1A / IF-1 J165_01862 PF02861 Clp amino terminal domain, pathogenicity island component J165_01862 PF07724 AAA domain (Cdc48 subfamily) J165_01862 PF17871 AAA lid domain J165_01862 PF00004 ATPase family associated with various cellular activities (AAA) J165_01862 PF10431 C-terminal, D2-small domain, of ClpB protein J165_01863 PF02617 ATP-dependent Clp protease adaptor protein ClpS J165_01864 PF00293 NUDIX domain J165_01866 PF04356 Protein of unknown function (DUF489) J165_01867 PF00672 HAMP domain J165_01867 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_01867 PF12729 Four helix bundle sensory module for signal transduction J165_01869 PF03707 Bacterial signalling protein N terminal repeat J165_01869 PF00990 Diguanylate cyclase, GGDEF domain J165_01869 PF00563 EAL domain J165_01870 PF07730 Histidine kinase J165_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01871 PF00563 EAL domain J165_01871 PF03707 Bacterial signalling protein N terminal repeat J165_01871 PF00990 Diguanylate cyclase, GGDEF domain J165_01872 PF13188 PAS domain J165_01872 PF00989 PAS fold J165_01872 PF00512 His Kinase A (phospho-acceptor) domain J165_01872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01872 PF13426 PAS domain J165_01876 PF01584 CheW-like domain J165_01876 PF00072 Response regulator receiver domain J165_01878 PF00460 Flagella basal body rod protein J165_01878 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01879 PF03963 Flagellar hook capping protein - N-terminal region J165_01880 PF00460 Flagella basal body rod protein J165_01880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01880 PF07559 Flagellar basal body protein FlaE J165_01881 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01881 PF00460 Flagella basal body rod protein J165_01882 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01882 PF00460 Flagella basal body rod protein J165_01883 PF02107 Flagellar L-ring protein J165_01884 PF02119 Flagellar P-ring protein J165_01885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J165_01885 PF10135 Rod binding protein J165_01886 PF07196 Flagellin hook IN motif J165_01886 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01887 PF00700 Bacterial flagellin C-terminal helical region J165_01887 PF00669 Bacterial flagellin N-terminal helical region J165_01888 PF00669 Bacterial flagellin N-terminal helical region J165_01888 PF00700 Bacterial flagellin C-terminal helical region J165_01889 PF02465 Flagellar hook-associated protein 2 N-terminus J165_01889 PF07195 Flagellar hook-associated protein 2 C-terminus J165_01889 PF07196 Flagellin hook IN motif J165_01890 PF02561 Flagellar protein FliS J165_01893 PF00196 Bacterial regulatory proteins, luxR family J165_01893 PF00072 Response regulator receiver domain J165_01894 PF00309 Sigma-54 factor, Activator interacting domain (AID) J165_01894 PF04963 Sigma-54 factor, core binding domain J165_01894 PF04552 Sigma-54, DNA binding domain J165_01895 PF01339 CheB methylesterase J165_01895 PF00072 Response regulator receiver domain J165_01896 PF00158 Sigma-54 interaction domain J165_01896 PF02954 Bacterial regulatory protein, Fis family J165_01896 PF00072 Response regulator receiver domain J165_01897 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J165_01899 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_01899 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_01907 PF00534 Glycosyl transferases group 1 J165_01907 PF00535 Glycosyl transferase family 2 J165_01908 PF02049 Flagellar hook-basal body complex protein FliE J165_01909 PF08345 Flagellar M-ring protein C-terminal J165_01909 PF01514 Secretory protein of YscJ/FliF family J165_01910 PF01706 FliG C-terminal domain J165_01910 PF14841 FliG middle domain J165_01910 PF14842 FliG N-terminal domain J165_01912 PF18269 T3SS EscN ATPase C-terminal domain J165_01912 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_01916 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J165_01916 PF02154 Flagellar motor switch protein FliM J165_01917 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J165_01918 PF04347 Flagellar biosynthesis protein, FliO J165_01919 PF00813 FliP family J165_01922 PF01313 Bacterial export proteins, family 3 J165_01923 PF01311 Bacterial export proteins, family 1 J165_01924 PF13188 PAS domain J165_01924 PF03707 Bacterial signalling protein N terminal repeat J165_01924 PF00990 Diguanylate cyclase, GGDEF domain J165_01924 PF00563 EAL domain J165_01925 PF13188 PAS domain J165_01925 PF00563 EAL domain J165_01925 PF03707 Bacterial signalling protein N terminal repeat J165_01925 PF00990 Diguanylate cyclase, GGDEF domain J165_01926 PF03707 Bacterial signalling protein N terminal repeat J165_01926 PF00563 EAL domain J165_01926 PF00990 Diguanylate cyclase, GGDEF domain J165_01927 PF01312 FlhB HrpN YscU SpaS Family J165_01928 PF00771 FHIPEP family J165_01929 PF00448 SRP54-type protein, GTPase domain J165_01930 PF10609 NUBPL iron-transfer P-loop NTPase J165_01931 PF04542 Sigma-70 region 2 J165_01931 PF04539 Sigma-70 region 3 J165_01931 PF04545 Sigma-70, region 4 J165_01932 PF00072 Response regulator receiver domain J165_01933 PF04344 Chemotaxis phosphatase, CheZ J165_01934 PF07194 P2 response regulator binding domain J165_01934 PF01627 Hpt domain J165_01934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01934 PF02895 Signal transducing histidine kinase, homodimeric domain J165_01934 PF01584 CheW-like domain J165_01936 PF04055 Radical SAM superfamily J165_01936 PF13186 Iron-sulfur cluster-binding domain J165_01941 PF01527 Transposase J165_01942 PF00665 Integrase core domain J165_01942 PF13333 Integrase core domain J165_01942 PF13276 HTH-like domain J165_01945 PF02796 Helix-turn-helix domain of resolvase J165_01945 PF00665 Integrase core domain J165_01946 PF01695 IstB-like ATP binding protein J165_01951 PF00580 UvrD/REP helicase N-terminal domain J165_01951 PF13361 UvrD-like helicase C-terminal domain J165_01951 PF12462 DNA helicase IV / RNA helicase N terminal J165_01966 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01966 PF03466 LysR substrate binding domain J165_01967 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_01967 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_01968 PF03401 Tripartite tricarboxylate transporter family receptor J165_01972 PF04002 RadC-like JAB domain J165_01979 PF13356 Arm DNA-binding domain J165_01979 PF00589 Phage integrase family J165_01980 PF00117 Glutamine amidotransferase class-I J165_01980 PF02540 NAD synthase J165_01980 PF00958 GMP synthase C terminal domain J165_01981 PF00478 IMP dehydrogenase / GMP reductase domain J165_01981 PF00571 CBS domain J165_01982 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J165_01982 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J165_01984 PF02254 TrkA-N domain J165_01984 PF00999 Sodium/hydrogen exchanger family J165_01985 PF00483 Nucleotidyl transferase J165_01986 PF02719 Polysaccharide biosynthesis protein J165_01987 PF00953 Glycosyl transferase family 4 J165_01988 PF18073 Rubredoxin metal binding domain J165_01990 PF00216 Bacterial DNA-binding protein J165_01991 PF00575 S1 RNA binding domain J165_01992 PF02224 Cytidylate kinase J165_01993 PF00444 Ribosomal protein L36 J165_01996 PF04371 Porphyromonas-type peptidyl-arginine deiminase J165_01997 PF00795 Carbon-nitrogen hydrolase J165_02002 PF00528 Binding-protein-dependent transport system inner membrane component J165_02003 PF00528 Binding-protein-dependent transport system inner membrane component J165_02007 PF00356 Bacterial regulatory proteins, lacI family J165_02009 PF03795 YCII-related domain J165_02010 PF02616 Segregation and condensation protein ScpA J165_02011 PF04079 Segregation and condensation complex subunit ScpB J165_02012 PF00849 RNA pseudouridylate synthase J165_02012 PF01479 S4 domain J165_02015 PF00795 Carbon-nitrogen hydrolase J165_02016 PF00155 Aminotransferase class I and II J165_02017 PF00005 ABC transporter J165_02018 PF03379 CcmB protein J165_02019 PF01578 Cytochrome C assembly protein J165_02021 PF03100 CcmE J165_02022 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J165_02022 PF01578 Cytochrome C assembly protein J165_02023 PF08534 Redoxin J165_02024 PF03918 Cytochrome C biogenesis protein J165_02026 PF00561 alpha/beta hydrolase fold J165_02027 PF00313 'Cold-shock' DNA-binding domain J165_02028 PF00664 ABC transporter transmembrane region J165_02028 PF00005 ABC transporter J165_02029 PF00664 ABC transporter transmembrane region J165_02029 PF00005 ABC transporter J165_02030 PF01654 Cytochrome bd terminal oxidase subunit I J165_02031 PF02322 Cytochrome bd terminal oxidase subunit II J165_02035 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J165_02035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J165_02036 PF00171 Aldehyde dehydrogenase family J165_02037 PF00696 Amino acid kinase family J165_02037 PF01472 PUA domain J165_02039 PF00206 Lyase J165_02040 PF01118 Semialdehyde dehydrogenase, NAD binding domain J165_02042 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J165_02042 PF00696 Amino acid kinase family J165_02045 PF00764 Arginosuccinate synthase J165_02046 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J165_02046 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J165_02048 PF01406 tRNA synthetases class I (C) catalytic domain J165_02048 PF09190 DALR domain J165_02049 PF02657 Fe-S metabolism associated domain J165_02051 PF01258 Prokaryotic dksA/traR C4-type zinc finger J165_02052 PF01809 Putative membrane protein insertion efficiency factor J165_02053 PF01979 Amidohydrolase family J165_02054 PF01551 Peptidase family M23 J165_02054 PF08460 Bacterial SH3 domain J165_02057 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J165_02058 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J165_02060 PF00753 Metallo-beta-lactamase superfamily J165_02064 PF01527 Transposase J165_02067 PF00295 Glycosyl hydrolases family 28 J165_02069 PF13419 Haloacid dehalogenase-like hydrolase J165_02071 PF01979 Amidohydrolase family J165_02073 PF01132 Elongation factor P (EF-P) OB domain J165_02073 PF09285 Elongation factor P, C-terminal J165_02073 PF08207 Elongation factor P (EF-P) KOW-like domain J165_02074 PF04055 Radical SAM superfamily J165_02075 PF13188 PAS domain J165_02075 PF00990 Diguanylate cyclase, GGDEF domain J165_02075 PF00563 EAL domain J165_02075 PF03707 Bacterial signalling protein N terminal repeat J165_02077 PF00588 SpoU rRNA Methylase family J165_02078 PF00459 Inositol monophosphatase family J165_02079 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J165_02079 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J165_02080 PF00545 ribonuclease J165_02083 PF00270 DEAD/DEAH box helicase J165_02083 PF03880 DbpA RNA binding domain J165_02083 PF00271 Helicase conserved C-terminal domain J165_02084 PF00156 Phosphoribosyl transferase domain J165_02085 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J165_02086 PF00135 Carboxylesterase family J165_02087 PF02798 Glutathione S-transferase, N-terminal domain J165_02087 PF14497 Glutathione S-transferase, C-terminal domain J165_02088 PF00313 'Cold-shock' DNA-binding domain J165_02089 PF07152 YaeQ protein J165_02091 PF00072 Response regulator receiver domain J165_02091 PF00990 Diguanylate cyclase, GGDEF domain J165_02091 PF00563 EAL domain J165_02092 PF01435 Peptidase family M48 J165_02093 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_02094 PF00106 short chain dehydrogenase J165_02095 PF07879 PHB/PHA accumulation regulator DNA-binding domain J165_02095 PF05233 PHB accumulation regulatory domain J165_02098 PF01119 DNA mismatch repair protein, C-terminal domain J165_02098 PF08676 MutL C terminal dimerisation domain J165_02099 PF11741 AMIN domain J165_02099 PF01520 N-acetylmuramoyl-L-alanine amidase J165_02100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J165_02101 PF03853 YjeF-related protein N-terminus J165_02101 PF01256 Carbohydrate kinase J165_02102 PF08331 Domain of unknown function (DUF1730) J165_02103 PF13742 OB-fold nucleic acid binding domain J165_02103 PF02601 Exonuclease VII, large subunit J165_02105 PF03781 Sulfatase-modifying factor enzyme 1 J165_02106 PF00570 HRDC domain J165_02106 PF01612 3'-5' exonuclease J165_02108 PF13298 DNA polymerase Ligase (LigD) J165_02108 PF01068 ATP dependent DNA ligase domain J165_02108 PF04679 ATP dependent DNA ligase C terminal region J165_02112 PF00589 Phage integrase family J165_02116 PF05598 Transposase domain (DUF772) J165_02118 PF01527 Transposase J165_02122 PF00171 Aldehyde dehydrogenase family J165_02122 PF01619 Proline dehydrogenase J165_02122 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J165_02122 PF14850 DNA-binding domain of Proline dehydrogenase J165_02124 PF01527 Transposase J165_02126 PF00665 Integrase core domain J165_02126 PF13276 HTH-like domain J165_02126 PF13333 Integrase core domain J165_02128 PF00239 Resolvase, N terminal domain J165_02128 PF02796 Helix-turn-helix domain of resolvase J165_02131 PF02384 N-6 DNA Methylase J165_02132 PF09572 XamI restriction endonuclease J165_02144 PF01584 CheW-like domain J165_02145 PF00672 HAMP domain J165_02145 PF12729 Four helix bundle sensory module for signal transduction J165_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02146 PF02245 Methylpurine-DNA glycosylase (MPG) J165_02147 PF08494 DEAD/H associated J165_02147 PF00271 Helicase conserved C-terminal domain J165_02147 PF00270 DEAD/DEAH box helicase J165_02150 PF04386 Stringent starvation protein B J165_02151 PF02798 Glutathione S-transferase, N-terminal domain J165_02151 PF00043 Glutathione S-transferase, C-terminal domain J165_02152 PF02167 Cytochrome C1 family J165_02153 PF00032 Cytochrome b(C-terminal)/b6/petD J165_02153 PF00033 Cytochrome b/b6/petB J165_02154 PF00355 Rieske [2Fe-2S] domain J165_02154 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J165_02155 PF01464 Transglycosylase SLT domain J165_02158 PF04055 Radical SAM superfamily J165_02158 PF00919 Uncharacterized protein family UPF0004 J165_02158 PF01938 TRAM domain J165_02159 PF02562 PhoH-like protein J165_02161 PF02130 Uncharacterized protein family UPF0054 J165_02163 PF03471 Transporter associated domain J165_02163 PF00571 CBS domain J165_02166 PF00171 Aldehyde dehydrogenase family J165_02167 PF00528 Binding-protein-dependent transport system inner membrane component J165_02168 PF00528 Binding-protein-dependent transport system inner membrane component J165_02169 PF08402 TOBE domain J165_02169 PF00005 ABC transporter J165_02170 PF02321 Outer membrane efflux protein J165_02171 PF07690 Major Facilitator Superfamily J165_02172 PF13533 Biotin-lipoyl like J165_02173 PF13416 Bacterial extracellular solute-binding protein J165_02174 PF00202 Aminotransferase class-III J165_02175 PF00120 Glutamine synthetase, catalytic domain J165_02176 PF07722 Peptidase C26 J165_02177 PF00120 Glutamine synthetase, catalytic domain J165_02178 PF01266 FAD dependent oxidoreductase J165_02179 PF00072 Response regulator receiver domain J165_02179 PF00990 Diguanylate cyclase, GGDEF domain J165_02180 PF01814 Hemerythrin HHE cation binding domain J165_02181 PF07690 Major Facilitator Superfamily J165_02181 PF00083 Sugar (and other) transporter J165_02183 PF00384 Molybdopterin oxidoreductase J165_02184 PF02634 FdhD/NarQ family J165_02185 PF07690 Major Facilitator Superfamily J165_02186 PF00202 Aminotransferase class-III J165_02188 PF04286 Protein of unknown function (DUF445) J165_02189 PF00672 HAMP domain J165_02189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02189 PF00512 His Kinase A (phospho-acceptor) domain J165_02189 PF01627 Hpt domain J165_02189 PF00072 Response regulator receiver domain J165_02189 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J165_02190 PF00072 Response regulator receiver domain J165_02191 PF07690 Major Facilitator Superfamily J165_02192 PF05088 Bacterial NAD-glutamate dehydrogenase J165_02194 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_02194 PF00529 HlyD membrane-fusion protein of T1SS J165_02195 PF00873 AcrB/AcrD/AcrF family J165_02196 PF00356 Bacterial regulatory proteins, lacI family J165_02197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J165_02197 PF02896 PEP-utilising enzyme, TIM barrel domain J165_02197 PF00391 PEP-utilising enzyme, mobile domain J165_02197 PF05524 PEP-utilising enzyme, N-terminal J165_02197 PF00381 PTS HPr component phosphorylation site J165_02198 PF00294 pfkB family carbohydrate kinase J165_02199 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J165_02207 PF02355 Protein export membrane protein J165_02207 PF07549 SecD/SecF GG Motif J165_02208 PF02355 Protein export membrane protein J165_02208 PF13721 SecD export protein N-terminal TM region J165_02208 PF07549 SecD/SecF GG Motif J165_02209 PF02699 Preprotein translocase subunit J165_02210 PF01702 Queuine tRNA-ribosyltransferase J165_02211 PF02547 Queuosine biosynthesis protein J165_02220 PF00759 Glycosyl hydrolase family 9 J165_02220 PF02927 Cellulase N-terminal ig-like domain J165_02222 PF00037 4Fe-4S binding domain J165_02225 PF01467 Cytidylyltransferase-like J165_02227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02227 PF00183 Hsp90 protein J165_02231 PF00593 TonB dependent receptor J165_02231 PF07715 TonB-dependent Receptor Plug Domain J165_02233 PF04616 Glycosyl hydrolases family 43 J165_02234 PF07532 Bacterial Ig-like domain (group 4) J165_02235 PF00593 TonB dependent receptor J165_02235 PF07715 TonB-dependent Receptor Plug Domain J165_02237 PF00082 Subtilase family J165_02237 PF09286 Pro-kumamolisin, activation domain J165_02243 PF13520 Amino acid permease J165_02246 PF00557 Metallopeptidase family M24 J165_02246 PF01321 Creatinase/Prolidase N-terminal domain J165_02247 PF00171 Aldehyde dehydrogenase family J165_02248 PF00701 Dihydrodipicolinate synthetase family J165_02249 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_02249 PF04324 BFD-like [2Fe-2S] binding domain J165_02251 PF01266 FAD dependent oxidoreductase J165_02252 PF05544 Proline racemase J165_02254 PF02881 SRP54-type protein, helical bundle domain J165_02254 PF00448 SRP54-type protein, GTPase domain J165_02255 PF00633 Helix-hairpin-helix motif J165_02255 PF10576 Iron-sulfur binding domain of endonuclease III J165_02255 PF14815 NUDIX domain J165_02255 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_02256 PF04362 Bacterial Fe(2+) trafficking J165_02257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02257 PF13426 PAS domain J165_02257 PF00072 Response regulator receiver domain J165_02263 PF08212 Lipocalin-like domain J165_02265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02265 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02265 PF12806 Acetyl-CoA dehydrogenase C-terminal like J165_02267 PF02779 Transketolase, pyrimidine binding domain J165_02267 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J165_02267 PF02780 Transketolase, C-terminal domain J165_02271 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J165_02272 PF16123 Hydroxyacylglutathione hydrolase C-terminus J165_02272 PF00753 Metallo-beta-lactamase superfamily J165_02273 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_02273 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_02276 PF03808 Glycosyl transferase WecB/TagA/CpsF family J165_02279 PF14667 Polysaccharide biosynthesis C-terminal domain J165_02281 PF13439 Glycosyltransferase Family 4 J165_02281 PF00534 Glycosyl transferases group 1 J165_02285 PF02397 Bacterial sugar transferase J165_02289 PF13411 MerR HTH family regulatory protein J165_02290 PF00216 Bacterial DNA-binding protein J165_02291 PF03483 B3/4 domain J165_02291 PF03147 Ferredoxin-fold anticodon binding domain J165_02291 PF01588 Putative tRNA binding domain J165_02291 PF03484 tRNA synthetase B5 domain J165_02291 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J165_02292 PF01409 tRNA synthetases class II core domain (F) J165_02292 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J165_02293 PF00453 Ribosomal protein L20 J165_02294 PF01632 Ribosomal protein L35 J165_02296 PF05198 Translation initiation factor IF-3, N-terminal domain J165_02296 PF00707 Translation initiation factor IF-3, C-terminal domain J165_02297 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_02297 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J165_02297 PF02824 TGS domain J165_02297 PF03129 Anticodon binding domain J165_02298 PF00356 Bacterial regulatory proteins, lacI family J165_02299 PF00686 Starch binding domain J165_02299 PF00128 Alpha amylase, catalytic domain J165_02300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J165_02302 PF14508 Glycosyl-hydrolase 97 N-terminal J165_02302 PF10566 Glycoside hydrolase 97 J165_02302 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J165_02306 PF00128 Alpha amylase, catalytic domain J165_02307 PF01527 Transposase J165_02311 PF00083 Sugar (and other) transporter J165_02313 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_02313 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_02315 PF16338 Domain of unknown function (DUF4968) J165_02315 PF01055 Glycosyl hydrolases family 31 J165_02315 PF17137 Domain of unknown function (DUF5110) J165_02318 PF00942 Cellulose binding domain J165_02318 PF03442 Carbohydrate binding domain X2 J165_02321 PF03466 LysR substrate binding domain J165_02321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02323 PF01081 KDPG and KHG aldolase J165_02324 PF13378 Enolase C-terminal domain-like J165_02324 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_02325 PF08450 SMP-30/Gluconolactonase/LRE-like region J165_02326 PF05035 2-keto-3-deoxy-galactonokinase J165_02327 PF11953 Domain of unknown function (DUF3470) J165_02327 PF00037 4Fe-4S binding domain J165_02329 PF00701 Dihydrodipicolinate synthetase family J165_02332 PF00578 AhpC/TSA family J165_02333 PF13638 PIN domain J165_02333 PF02562 PhoH-like protein J165_02336 PF08543 Phosphomethylpyrimidine kinase J165_02336 PF02581 Thiamine monophosphate synthase J165_02341 PF03466 LysR substrate binding domain J165_02341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02342 PF17954 Quercetinase C-terminal cupin domain J165_02342 PF02678 Pirin J165_02343 PF08447 PAS fold J165_02343 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02343 PF13426 PAS domain J165_02345 PF02599 Global regulator protein family J165_02346 PF01411 tRNA synthetases class II (A) J165_02346 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J165_02346 PF02272 DHHA1 domain J165_02347 PF02631 RecX family J165_02348 PF00154 recA bacterial DNA recombination protein J165_02349 PF01726 LexA DNA binding domain J165_02349 PF00717 Peptidase S24-like J165_02350 PF03109 ABC1 family J165_02351 PF02464 Competence-damaged protein J165_02352 PF01926 50S ribosome-binding GTPase J165_02352 PF13167 GTP-binding GTPase N-terminal J165_02352 PF16360 GTP-binding GTPase Middle Region J165_02353 PF17209 Hfq protein J165_02355 PF00809 Pterin binding enzyme J165_02356 PF01434 Peptidase family M41 J165_02356 PF06480 FtsH Extracellular J165_02356 PF17862 AAA+ lid domain J165_02356 PF00004 ATPase family associated with various cellular activities (AAA) J165_02357 PF01728 FtsJ-like methyltransferase J165_02358 PF01985 CRS1 / YhbY (CRM) domain J165_02359 PF04430 Protein of unknown function (DUF498/DUF598) J165_02361 PF01476 LysM domain J165_02361 PF01551 Peptidase family M23 J165_02362 PF09335 SNARE associated Golgi protein J165_02364 PF01975 Survival protein SurE J165_02365 PF01713 Smr domain J165_02366 PF01142 tRNA pseudouridine synthase D (TruD) J165_02367 PF02542 YgbB family J165_02368 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J165_02369 PF04977 Septum formation initiator J165_02370 PF03952 Enolase, N-terminal domain J165_02370 PF00113 Enolase, C-terminal TIM barrel domain J165_02372 PF00793 DAHP synthetase I family J165_02373 PF06418 CTP synthase N-terminus J165_02373 PF00117 Glutamine amidotransferase class-I J165_02375 PF00204 DNA gyrase B J165_02375 PF00986 DNA gyrase B subunit, carboxyl terminus J165_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02375 PF01751 Toprim domain J165_02378 PF01384 Phosphate transporter family J165_02380 PF00571 CBS domain J165_02380 PF01595 Cyclin M transmembrane N-terminal domain J165_02380 PF03471 Transporter associated domain J165_02383 PF00296 Luciferase-like monooxygenase J165_02384 PF07690 Major Facilitator Superfamily J165_02385 PF00005 ABC transporter J165_02385 PF00664 ABC transporter transmembrane region J165_02386 PF00005 ABC transporter J165_02389 PF13579 Glycosyl transferase 4-like domain J165_02389 PF00534 Glycosyl transferases group 1 J165_02393 PF08241 Methyltransferase domain J165_02396 PF00535 Glycosyl transferase family 2 J165_02397 PF01943 Polysaccharide biosynthesis protein J165_02398 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J165_02402 PF05523 WxcM-like, C-terminal J165_02405 PF00034 Cytochrome c J165_02408 PF08281 Sigma-70, region 4 J165_02408 PF04542 Sigma-70 region 2 J165_02410 PF00082 Subtilase family J165_02411 PF01578 Cytochrome C assembly protein J165_02413 PF03100 CcmE J165_02414 PF01578 Cytochrome C assembly protein J165_02414 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J165_02415 PF08534 Redoxin J165_02416 PF03918 Cytochrome C biogenesis protein J165_02418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02418 PF00072 Response regulator receiver domain J165_02418 PF13426 PAS domain J165_02419 PF06745 KaiC J165_02420 PF00486 Transcriptional regulatory protein, C terminal J165_02420 PF00072 Response regulator receiver domain J165_02421 PF13188 PAS domain J165_02421 PF08448 PAS fold J165_02421 PF00072 Response regulator receiver domain J165_02421 PF00512 His Kinase A (phospho-acceptor) domain J165_02421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02424 PF00672 HAMP domain J165_02424 PF02203 Tar ligand binding domain homologue J165_02429 PF13276 HTH-like domain J165_02429 PF00665 Integrase core domain J165_02429 PF13333 Integrase core domain J165_02430 PF01527 Transposase J165_02431 PF01381 Helix-turn-helix J165_02432 PF05284 Protein of unknown function (DUF736) J165_02433 PF04002 RadC-like JAB domain J165_02438 PF00589 Phage integrase family J165_02438 PF13356 Arm DNA-binding domain J165_02441 PF07715 TonB-dependent Receptor Plug Domain J165_02441 PF00593 TonB dependent receptor J165_02445 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J165_02450 PF07715 TonB-dependent Receptor Plug Domain J165_02450 PF00593 TonB dependent receptor J165_02452 PF10947 Protein of unknown function (DUF2628) J165_02454 PF00722 Glycosyl hydrolases family 16 J165_02454 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J165_02458 PF00664 ABC transporter transmembrane region J165_02458 PF03412 Peptidase C39 family J165_02458 PF00005 ABC transporter J165_02460 PF13614 AAA domain J165_02469 PF01131 DNA topoisomerase J165_02469 PF01751 Toprim domain J165_02470 PF01751 Toprim domain J165_02470 PF01131 DNA topoisomerase J165_02471 PF00145 C-5 cytosine-specific DNA methylase J165_02483 PF17761 DUF1016 N-terminal domain J165_02483 PF06250 YhcG PDDEXK nuclease domain J165_02484 PF01527 Transposase J165_02485 PF13333 Integrase core domain J165_02485 PF00665 Integrase core domain J165_02485 PF13276 HTH-like domain J165_02495 PF03793 PASTA domain J165_02495 PF00069 Protein kinase domain J165_02498 PF01618 MotA/TolQ/ExbB proton channel family J165_02499 PF00691 OmpA family J165_02499 PF13677 Membrane MotB of proton-channel complex MotA/MotB J165_02500 PF13614 AAA domain J165_02501 PF01584 CheW-like domain J165_02503 PF00072 Response regulator receiver domain J165_02504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02504 PF01627 Hpt domain J165_02504 PF09078 CheY binding J165_02504 PF02895 Signal transducing histidine kinase, homodimeric domain J165_02504 PF01584 CheW-like domain J165_02505 PF00672 HAMP domain J165_02505 PF02203 Tar ligand binding domain homologue J165_02505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02507 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02507 PF00672 HAMP domain J165_02507 PF17200 Single Cache domain 2 J165_02507 PF00672 HAMP domain J165_02507 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02507 PF17200 Single Cache domain 2 J165_02508 PF02203 Tar ligand binding domain homologue J165_02508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02508 PF00672 HAMP domain J165_02510 PF02203 Tar ligand binding domain homologue J165_02510 PF00672 HAMP domain J165_02510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02511 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02511 PF00672 HAMP domain J165_02512 PF00672 HAMP domain J165_02512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02512 PF02203 Tar ligand binding domain homologue J165_02513 PF00672 HAMP domain J165_02513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02513 PF02203 Tar ligand binding domain homologue J165_02514 PF00672 HAMP domain J165_02514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02514 PF02203 Tar ligand binding domain homologue J165_02515 PF00672 HAMP domain J165_02515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02515 PF02203 Tar ligand binding domain homologue J165_02516 PF02203 Tar ligand binding domain homologue J165_02516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02516 PF00672 HAMP domain J165_02517 PF02203 Tar ligand binding domain homologue J165_02517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02517 PF00672 HAMP domain J165_02518 PF02203 Tar ligand binding domain homologue J165_02518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02518 PF00672 HAMP domain J165_02519 PF07238 PilZ domain J165_02519 PF07317 Flagellar regulator YcgR J165_02520 PF01584 CheW-like domain J165_02522 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02522 PF02203 Tar ligand binding domain homologue J165_02522 PF00672 HAMP domain J165_02523 PF01739 CheR methyltransferase, SAM binding domain J165_02523 PF03705 CheR methyltransferase, all-alpha domain J165_02524 PF03975 CheD chemotactic sensory transduction J165_02525 PF00072 Response regulator receiver domain J165_02525 PF01339 CheB methylesterase J165_02526 PF03707 Bacterial signalling protein N terminal repeat J165_02526 PF00563 EAL domain J165_02526 PF00990 Diguanylate cyclase, GGDEF domain J165_02527 PF00561 alpha/beta hydrolase fold J165_02528 PF00330 Aconitase family (aconitate hydratase) J165_02528 PF11791 Aconitate B N-terminal domain J165_02528 PF06434 Aconitate hydratase 2 N-terminus J165_02531 PF00694 Aconitase C-terminal domain J165_02531 PF00330 Aconitase family (aconitate hydratase) J165_02533 PF13193 AMP-binding enzyme C-terminal domain J165_02533 PF00501 AMP-binding enzyme J165_02534 PF00378 Enoyl-CoA hydratase/isomerase J165_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02535 PF00512 His Kinase A (phospho-acceptor) domain J165_02535 PF01627 Hpt domain J165_02535 PF00072 Response regulator receiver domain J165_02536 PF00072 Response regulator receiver domain J165_02537 PF01336 OB-fold nucleic acid binding domain J165_02537 PF00152 tRNA synthetases class II (D, K and N) J165_02538 PF00472 RF-1 domain J165_02538 PF03462 PCRF domain J165_02539 PF04397 LytTr DNA-binding domain J165_02539 PF00072 Response regulator receiver domain J165_02547 PF01368 DHH family J165_02547 PF02272 DHHA1 domain J165_02547 PF17768 RecJ OB domain J165_02549 PF03449 Transcription elongation factor, N-terminal J165_02549 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_02550 PF02142 MGS-like domain J165_02550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J165_02550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_02552 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J165_02552 PF00117 Glutamine amidotransferase class-I J165_02553 PF01113 Dihydrodipicolinate reductase, N-terminus J165_02553 PF05173 Dihydrodipicolinate reductase, C-terminus J165_02554 PF03473 MOSC domain J165_02554 PF03475 3-alpha domain J165_02555 PF00155 Aminotransferase class I and II J165_02558 PF07664 Ferrous iron transport protein B C terminus J165_02558 PF02421 Ferrous iron transport protein B J165_02558 PF07670 Nucleoside recognition J165_02560 PF00378 Enoyl-CoA hydratase/isomerase J165_02562 PF00682 HMGL-like J165_02563 PF00106 short chain dehydrogenase J165_02564 PF09285 Elongation factor P, C-terminal J165_02564 PF08207 Elongation factor P (EF-P) KOW-like domain J165_02564 PF01132 Elongation factor P (EF-P) OB domain J165_02568 PF01565 FAD binding domain J165_02568 PF02913 FAD linked oxidases, C-terminal domain J165_02569 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_02569 PF01842 ACT domain J165_02569 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_02571 PF13520 Amino acid permease J165_02572 PF13520 Amino acid permease J165_02573 PF00596 Class II Aldolase and Adducin N-terminal domain J165_02574 PF03079 ARD/ARD' family J165_02578 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J165_02578 PF01502 Phosphoribosyl-AMP cyclohydrolase J165_02579 PF00977 Histidine biosynthesis protein J165_02580 PF00977 Histidine biosynthesis protein J165_02581 PF00117 Glutamine amidotransferase class-I J165_02582 PF00475 Imidazoleglycerol-phosphate dehydratase J165_02583 PF00155 Aminotransferase class I and II J165_02584 PF00815 Histidinol dehydrogenase J165_02585 PF08029 HisG, C-terminal domain J165_02585 PF01634 ATP phosphoribosyltransferase J165_02587 PF13393 Histidyl-tRNA synthetase J165_02587 PF03129 Anticodon binding domain J165_02588 PF13545 Crp-like helix-turn-helix domain J165_02588 PF00027 Cyclic nucleotide-binding domain J165_02590 PF14821 Threonine synthase N terminus J165_02590 PF00291 Pyridoxal-phosphate dependent enzyme J165_02592 PF08544 GHMP kinases C terminal J165_02592 PF00288 GHMP kinases N terminal domain J165_02593 PF13840 ACT domain J165_02593 PF00696 Amino acid kinase family J165_02593 PF01842 ACT domain J165_02593 PF03447 Homoserine dehydrogenase, NAD binding domain J165_02593 PF00742 Homoserine dehydrogenase J165_02595 PF13332 Hemagglutinin repeat J165_02595 PF05594 Haemagluttinin repeat J165_02595 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J165_02595 PF13018 Extended Signal Peptide of Type V secretion system J165_02595 PF05860 haemagglutination activity domain J165_02597 PF13332 Hemagglutinin repeat J165_02597 PF05594 Haemagluttinin repeat J165_02597 PF04829 Pre-toxin domain with VENN motif J165_02598 PF05594 Haemagluttinin repeat J165_02598 PF13332 Hemagglutinin repeat J165_02598 PF04829 Pre-toxin domain with VENN motif J165_02599 PF17287 POTRA domain J165_02599 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J165_02599 PF08479 POTRA domain, ShlB-type J165_02601 PF01522 Polysaccharide deacetylase J165_02601 PF14883 Hypothetical glycosyl hydrolase family 13 J165_02602 PF00535 Glycosyl transferase family 2 J165_02605 PF00171 Aldehyde dehydrogenase family J165_02608 PF01180 Dihydroorotate dehydrogenase J165_02609 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J165_02609 PF01565 FAD binding domain J165_02610 PF00892 EamA-like transporter family J165_02611 PF01177 Asp/Glu/Hydantoin racemase J165_02612 PF07690 Major Facilitator Superfamily J165_02613 PF01569 PAP2 superfamily J165_02614 PF04551 GcpE protein J165_02616 PF00072 Response regulator receiver domain J165_02617 PF00150 Cellulase (glycosyl hydrolase family 5) J165_02617 PF02013 Cellulose or protein binding domain J165_02618 PF01590 GAF domain J165_02618 PF00360 Phytochrome region J165_02618 PF00563 EAL domain J165_02618 PF00990 Diguanylate cyclase, GGDEF domain J165_02619 PF00474 Sodium:solute symporter family J165_02620 PF14310 Fibronectin type III-like domain J165_02620 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_02620 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_02624 PF00342 Phosphoglucose isomerase J165_02625 PF02261 Aspartate decarboxylase J165_02626 PF02569 Pantoate-beta-alanine ligase J165_02627 PF02548 Ketopantoate hydroxymethyltransferase J165_02628 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J165_02629 PF12626 Polymerase A arginine-rich C-terminus J165_02629 PF12627 Probable RNA and SrmB- binding site of polymerase A J165_02629 PF01743 Poly A polymerase head domain J165_02633 PF02649 Type I GTP cyclohydrolase folE2 J165_02634 PF01520 N-acetylmuramoyl-L-alanine amidase J165_02636 PF00128 Alpha amylase, catalytic domain J165_02638 PF01527 Transposase J165_02647 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J165_02650 PF01464 Transglycosylase SLT domain J165_02651 PF00437 Type II/IV secretion system protein J165_02652 PF03743 Bacterial conjugation TrbI-like protein J165_02656 PF02534 Type IV secretory system Conjugative DNA transfer J165_02659 PF17757 UvrB interaction domain J165_02659 PF12344 Ultra-violet resistance protein B J165_02659 PF02151 UvrB/uvrC motif J165_02659 PF04851 Type III restriction enzyme, res subunit J165_02659 PF00271 Helicase conserved C-terminal domain J165_02667 PF01527 Transposase J165_02668 PF00665 Integrase core domain J165_02668 PF13333 Integrase core domain J165_02668 PF13276 HTH-like domain J165_02674 PF03466 LysR substrate binding domain J165_02674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02675 PF02525 Flavodoxin-like fold J165_02676 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_02676 PF02403 Seryl-tRNA synthetase N-terminal domain J165_02677 PF03544 Gram-negative bacterial TonB protein C-terminal J165_02679 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J165_02680 PF00800 Prephenate dehydratase J165_02680 PF01842 ACT domain J165_02680 PF01817 Chorismate mutase type II J165_02681 PF00266 Aminotransferase class-V J165_02682 PF00174 Oxidoreductase molybdopterin binding domain J165_02683 PF01794 Ferric reductase like transmembrane component J165_02689 PF07702 UTRA domain J165_02689 PF00392 Bacterial regulatory proteins, gntR family J165_02691 PF07969 Amidohydrolase family J165_02692 PF00221 Aromatic amino acid lyase J165_02694 PF01175 Urocanase Rossmann-like domain J165_02694 PF17392 Urocanase C-terminal domain J165_02694 PF17391 Urocanase N-terminal domain J165_02696 PF00521 DNA gyrase/topoisomerase IV, subunit A J165_02696 PF03989 DNA gyrase C-terminal domain, beta-propeller J165_02697 PF01008 Initiation factor 2 subunit family J165_02699 PF00152 tRNA synthetases class II (D, K and N) J165_02700 PF01653 NAD-dependent DNA ligase adenylation domain J165_02700 PF00533 BRCA1 C Terminus (BRCT) domain J165_02700 PF12826 Helix-hairpin-helix motif J165_02700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J165_02700 PF03120 NAD-dependent DNA ligase OB-fold domain J165_02701 PF00155 Aminotransferase class I and II J165_02703 PF04354 ZipA, C-terminal FtsZ-binding domain J165_02704 PF02463 RecF/RecN/SMC N terminal domain J165_02705 PF03948 Ribosomal protein L9, C-terminal domain J165_02705 PF01281 Ribosomal protein L9, N-terminal domain J165_02706 PF01084 Ribosomal protein S18 J165_02707 PF01250 Ribosomal protein S6 J165_02708 PF01521 Iron-sulphur cluster biosynthesis J165_02709 PF00152 tRNA synthetases class II (D, K and N) J165_02709 PF01336 OB-fold nucleic acid binding domain J165_02713 PF04299 Putative FMN-binding domain J165_02716 PF00196 Bacterial regulatory proteins, luxR family J165_02716 PF00072 Response regulator receiver domain J165_02725 PF00484 Carbonic anhydrase J165_02726 PF06052 3-hydroxyanthranilic acid dioxygenase J165_02728 PF00266 Aminotransferase class-V J165_02729 PF01494 FAD binding domain J165_02730 PF00929 Exonuclease J165_02730 PF08411 Exonuclease C-terminal J165_02734 PF01513 ATP-NAD kinase J165_02735 PF10672 S-adenosylmethionine-dependent methyltransferase J165_02735 PF02926 THUMP domain J165_02735 PF01170 Putative RNA methylase family UPF0020 J165_02742 PF00581 Rhodanese-like domain J165_02743 PF00293 NUDIX domain J165_02744 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J165_02744 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02745 PF00378 Enoyl-CoA hydratase/isomerase J165_02747 PF10576 Iron-sulfur binding domain of endonuclease III J165_02747 PF00633 Helix-hairpin-helix motif J165_02747 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_02748 PF01740 STAS domain J165_02748 PF00916 Sulfate permease family J165_02749 PF00484 Carbonic anhydrase J165_02752 PF12849 PBP superfamily domain J165_02753 PF12849 PBP superfamily domain J165_02754 PF00528 Binding-protein-dependent transport system inner membrane component J165_02755 PF00528 Binding-protein-dependent transport system inner membrane component J165_02756 PF00005 ABC transporter J165_02757 PF01895 PhoU domain J165_02759 PF00929 Exonuclease J165_02760 PF07694 5TMR of 5TMR-LYT J165_02760 PF00990 Diguanylate cyclase, GGDEF domain J165_02761 PF08032 RNA 2'-O ribose methyltransferase substrate binding J165_02761 PF00588 SpoU rRNA Methylase family J165_02763 PF00773 RNB domain J165_02763 PF08206 Ribonuclease B OB domain J165_02763 PF08461 Ribonuclease R winged-helix domain J165_02763 PF00575 S1 RNA binding domain J165_02763 PF17876 Cold shock domain J165_02766 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02766 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02766 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02767 PF01209 ubiE/COQ5 methyltransferase family J165_02768 PF00809 Pterin binding enzyme J165_02768 PF02574 Homocysteine S-methyltransferase J165_02769 PF02310 B12 binding domain J165_02769 PF02607 B12 binding domain J165_02769 PF02965 Vitamin B12 dependent methionine synthase, activation domain J165_02769 PF00809 Pterin binding enzyme J165_02769 PF02574 Homocysteine S-methyltransferase J165_02771 PF00294 pfkB family carbohydrate kinase J165_02772 PF07690 Major Facilitator Superfamily J165_02773 PF00356 Bacterial regulatory proteins, lacI family J165_02776 PF04102 SlyX J165_02777 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_02777 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_02777 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_02778 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J165_02778 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02779 PF00255 Glutathione peroxidase J165_02781 PF00392 Bacterial regulatory proteins, gntR family J165_02782 PF00005 ABC transporter J165_02787 PF10415 Fumarase C C-terminus J165_02787 PF00206 Lyase J165_02788 PF01595 Cyclin M transmembrane N-terminal domain J165_02788 PF03471 Transporter associated domain J165_02788 PF00571 CBS domain J165_02790 PF00206 Lyase J165_02790 PF08328 Adenylosuccinate lyase C-terminal J165_02792 PF08007 Cupin superfamily protein J165_02794 PF16870 2-oxoglutarate dehydrogenase C-terminal J165_02794 PF00676 Dehydrogenase E1 component J165_02794 PF02779 Transketolase, pyrimidine binding domain J165_02794 PF16078 2-oxoglutarate dehydrogenase N-terminus J165_02795 PF02817 e3 binding domain J165_02795 PF00364 Biotin-requiring enzyme J165_02795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_02796 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_02796 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_02797 PF03641 Possible lysine decarboxylase J165_02798 PF01205 Uncharacterized protein family UPF0029 J165_02799 PF00664 ABC transporter transmembrane region J165_02799 PF00005 ABC transporter J165_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02800 PF03466 LysR substrate binding domain J165_02801 PF03412 Peptidase C39 family J165_02801 PF00664 ABC transporter transmembrane region J165_02801 PF00005 ABC transporter J165_02806 PF08543 Phosphomethylpyrimidine kinase J165_02808 PF01556 DnaJ C terminal domain J165_02808 PF00226 DnaJ domain J165_02808 PF00684 DnaJ central domain J165_02809 PF00012 Hsp70 protein J165_02810 PF01025 GrpE J165_02811 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J165_02811 PF01628 HrcA protein C terminal domain J165_02812 PF02463 RecF/RecN/SMC N terminal domain J165_02813 PF01475 Ferric uptake regulator family J165_02814 PF04355 SmpA / OmlA family J165_02815 PF03658 RnfH family Ubiquitin J165_02816 PF03364 Polyketide cyclase / dehydrase and lipid transport J165_02817 PF01668 SmpB protein J165_02818 PF00082 Subtilase family J165_02827 PF01527 Transposase J165_02835 PF05598 Transposase domain (DUF772) J165_02846 PF00990 Diguanylate cyclase, GGDEF domain J165_02848 PF00990 Diguanylate cyclase, GGDEF domain J165_02848 PF08448 PAS fold J165_02849 PF02321 Outer membrane efflux protein J165_02850 PF00106 short chain dehydrogenase J165_02851 PF00873 AcrB/AcrD/AcrF family J165_02852 PF00529 HlyD membrane-fusion protein of T1SS J165_02852 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_02855 PF03466 LysR substrate binding domain J165_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02857 PF05736 OprF membrane domain J165_02857 PF00691 OmpA family J165_02858 PF03441 FAD binding domain of DNA photolyase J165_02858 PF00875 DNA photolyase J165_02859 PF00772 DnaB-like helicase N terminal domain J165_02859 PF03796 DnaB-like helicase C terminal domain J165_02860 PF03358 NADPH-dependent FMN reductase J165_02861 PF00733 Asparagine synthase J165_02861 PF13537 Glutamine amidotransferase domain J165_02862 PF02798 Glutathione S-transferase, N-terminal domain J165_02862 PF00043 Glutathione S-transferase, C-terminal domain J165_02864 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02864 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02864 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02867 PF01026 TatD related DNase J165_02868 PF00899 ThiF family J165_02871 PF00313 'Cold-shock' DNA-binding domain J165_02873 PF02253 Phospholipase A1 J165_02874 PF00484 Carbonic anhydrase J165_02876 PF05681 Fumarate hydratase (Fumerase) J165_02876 PF05683 Fumarase C-terminus J165_02877 PF00005 ABC transporter J165_02878 PF00970 Oxidoreductase FAD-binding domain J165_02878 PF00175 Oxidoreductase NAD-binding domain J165_02879 PF00255 Glutathione peroxidase J165_02880 PF01432 Peptidase family M3 J165_02881 PF12802 MarR family J165_02886 PF00854 POT family J165_02888 PF14310 Fibronectin type III-like domain J165_02888 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_02888 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_02890 PF07690 Major Facilitator Superfamily J165_02891 PF00529 HlyD membrane-fusion protein of T1SS J165_02891 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_02892 PF02321 Outer membrane efflux protein J165_02895 PF03989 DNA gyrase C-terminal domain, beta-propeller J165_02895 PF00521 DNA gyrase/topoisomerase IV, subunit A J165_02897 PF05724 Thiopurine S-methyltransferase (TPMT) J165_02898 PF00210 Ferritin-like domain J165_02899 PF01804 Penicillin amidase J165_02900 PF00593 TonB dependent receptor J165_02900 PF07715 TonB-dependent Receptor Plug Domain J165_02902 PF00733 Asparagine synthase J165_02902 PF13537 Glutamine amidotransferase domain J165_02903 PF07687 Peptidase dimerisation domain J165_02903 PF01546 Peptidase family M20/M25/M40 J165_02904 PF03960 ArsC family J165_02905 PF14602 Hexapeptide repeat of succinyl-transferase J165_02905 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J165_02906 PF01909 Nucleotidyltransferase domain J165_02906 PF01966 HD domain J165_02906 PF08335 GlnD PII-uridylyltransferase J165_02907 PF00557 Metallopeptidase family M24 J165_02914 PF00318 Ribosomal protein S2 J165_02915 PF00889 Elongation factor TS J165_02916 PF00072 Response regulator receiver domain J165_02916 PF00990 Diguanylate cyclase, GGDEF domain J165_02917 PF00696 Amino acid kinase family J165_02918 PF01765 Ribosome recycling factor J165_02919 PF01255 Putative undecaprenyl diphosphate synthase J165_02921 PF13288 DXP reductoisomerase C-terminal domain J165_02921 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J165_02921 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J165_02922 PF02163 Peptidase family M50 J165_02922 PF17820 PDZ domain J165_02923 PF01103 Surface antigen J165_02923 PF07244 Surface antigen variable number repeat J165_02925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J165_02925 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02926 PF07977 FabA-like domain J165_02927 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02927 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J165_02928 PF02684 Lipid-A-disaccharide synthetase J165_02929 PF01351 Ribonuclease HII J165_02930 PF02811 PHP domain J165_02930 PF14579 Helix-hairpin-helix motif J165_02930 PF01336 OB-fold nucleic acid binding domain J165_02930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J165_02930 PF07733 Bacterial DNA polymerase III alpha NTPase domain J165_02931 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J165_02938 PF03551 Transcriptional regulator PadR-like family J165_02942 PF02592 Putative vitamin uptake transporter J165_02944 PF02574 Homocysteine S-methyltransferase J165_02945 PF00324 Amino acid permease J165_02946 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_02947 PF13732 Domain of unknown function (DUF4162) J165_02947 PF00005 ABC transporter J165_02950 PF09334 tRNA synthetases class I (M) J165_02950 PF01588 Putative tRNA binding domain J165_02952 PF04060 Putative Fe-S cluster J165_02955 PF04542 Sigma-70 region 2 J165_02955 PF04545 Sigma-70, region 4 J165_02964 PF01042 Endoribonuclease L-PSP J165_02967 PF09924 Uncharacterised conserved protein (DUF2156) J165_02967 PF03706 Lysylphosphatidylglycerol synthase TM region J165_02974 PF07690 Major Facilitator Superfamily J165_02975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_02976 PF03831 PhnA domain J165_02976 PF08274 PhnA Zinc-Ribbon J165_02978 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02982 PF01258 Prokaryotic dksA/traR C4-type zinc finger J165_02984 PF07043 Protein of unknown function (DUF1328) J165_02985 PF01863 Protein of unknown function DUF45 J165_02987 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J165_02987 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J165_02988 PF12951 Passenger-associated-transport-repeat J165_02988 PF03797 Autotransporter beta-domain J165_02988 PF00082 Subtilase family J165_02989 PF00108 Thiolase, N-terminal domain J165_02989 PF02803 Thiolase, C-terminal domain J165_02992 PF00990 Diguanylate cyclase, GGDEF domain J165_02992 PF00072 Response regulator receiver domain J165_02995 PF01068 ATP dependent DNA ligase domain J165_02995 PF04679 ATP dependent DNA ligase C terminal region J165_02995 PF04675 DNA ligase N terminus J165_02997 PF04675 DNA ligase N terminus J165_02997 PF01068 ATP dependent DNA ligase domain J165_02997 PF04679 ATP dependent DNA ligase C terminal region J165_02998 PF00271 Helicase conserved C-terminal domain J165_02998 PF08494 DEAD/H associated J165_02998 PF00270 DEAD/DEAH box helicase J165_03000 PF01494 FAD binding domain J165_03001 PF00313 'Cold-shock' DNA-binding domain J165_03002 PF01048 Phosphorylase superfamily J165_03004 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_03005 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J165_03006 PF01593 Flavin containing amine oxidoreductase J165_03007 PF01323 DSBA-like thioredoxin domain J165_03009 PF05958 tRNA (Uracil-5-)-methyltransferase J165_03011 PF02565 Recombination protein O C terminal J165_03011 PF11967 Recombination protein O N terminal J165_03012 PF07650 KH domain J165_03012 PF01926 50S ribosome-binding GTPase J165_03013 PF00035 Double-stranded RNA binding motif J165_03013 PF14622 Ribonuclease-III-like J165_03015 PF10502 Signal peptidase, peptidase S26 J165_03016 PF06421 GTP-binding protein LepA C-terminus J165_03016 PF03144 Elongation factor Tu domain 2 J165_03016 PF00009 Elongation factor Tu GTP binding domain J165_03016 PF00679 Elongation factor G C-terminus J165_03017 PF13180 PDZ domain J165_03019 PF08281 Sigma-70, region 4 J165_03019 PF04542 Sigma-70 region 2 J165_03020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J165_03020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J165_03020 PF00378 Enoyl-CoA hydratase/isomerase J165_03021 PF01545 Cation efflux family J165_03022 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_03022 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_03023 PF00378 Enoyl-CoA hydratase/isomerase J165_03023 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J165_03023 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J165_03024 PF00378 Enoyl-CoA hydratase/isomerase J165_03025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_03025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03025 PF02770 Acyl-CoA dehydrogenase, middle domain J165_03026 PF00171 Aldehyde dehydrogenase family J165_03027 PF01381 Helix-turn-helix J165_03027 PF06114 IrrE N-terminal-like domain J165_03027 PF09856 Predicted transcriptional regulator (DUF2083) J165_03029 PF07745 Glycosyl hydrolase family 53 J165_03030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_03030 PF00703 Glycosyl hydrolases family 2 J165_03030 PF16355 Domain of unknown function (DUF4982) J165_03030 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_03030 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J165_03034 PF05593 RHS Repeat J165_03034 PF03527 RHS protein J165_03037 PF01624 MutS domain I J165_03037 PF05192 MutS domain III J165_03037 PF05190 MutS family domain IV J165_03037 PF00488 MutS domain V J165_03037 PF05188 MutS domain II J165_03039 PF00141 Peroxidase J165_03040 PF01479 S4 domain J165_03043 PF01554 MatE J165_03044 PF01245 Ribosomal protein L19 J165_03045 PF01746 tRNA (Guanine-1)-methyltransferase J165_03046 PF01782 RimM N-terminal domain J165_03046 PF05239 PRC-barrel domain J165_03047 PF00886 Ribosomal protein S16 J165_03048 PF01063 Amino-transferase class IV J165_03049 PF03060 Nitronate monooxygenase J165_03050 PF02978 Signal peptide binding domain J165_03050 PF02881 SRP54-type protein, helical bundle domain J165_03050 PF00448 SRP54-type protein, GTPase domain J165_03051 PF01578 Cytochrome C assembly protein J165_03052 PF01263 Aldose 1-epimerase J165_03053 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J165_03054 PF00722 Glycosyl hydrolases family 16 J165_03055 PF00072 Response regulator receiver domain J165_03056 PF00072 Response regulator receiver domain J165_03056 PF13426 PAS domain J165_03056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03057 PF00672 HAMP domain J165_03057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03057 PF00512 His Kinase A (phospho-acceptor) domain J165_03057 PF01627 Hpt domain J165_03057 PF00072 Response regulator receiver domain J165_03057 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J165_03058 PF01739 CheR methyltransferase, SAM binding domain J165_03058 PF03705 CheR methyltransferase, all-alpha domain J165_03059 PF01339 CheB methylesterase J165_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03060 PF13492 GAF domain J165_03060 PF13493 Domain of unknown function (DUF4118) J165_03060 PF02702 Osmosensitive K+ channel His kinase sensor domain J165_03060 PF00512 His Kinase A (phospho-acceptor) domain J165_03061 PF07237 Protein of unknown function (DUF1428) J165_03062 PF00085 Thioredoxin J165_03063 PF07715 TonB-dependent Receptor Plug Domain J165_03063 PF00593 TonB dependent receptor J165_03064 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J165_03064 PF04616 Glycosyl hydrolases family 43 J165_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03065 PF13188 PAS domain J165_03065 PF00512 His Kinase A (phospho-acceptor) domain J165_03065 PF00072 Response regulator receiver domain J165_03065 PF08448 PAS fold J165_03066 PF00072 Response regulator receiver domain J165_03066 PF17149 Periplasmic sensor domain found in signal transduction proteins J165_03066 PF01627 Hpt domain J165_03066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03066 PF00672 HAMP domain J165_03066 PF00512 His Kinase A (phospho-acceptor) domain J165_03068 PF13581 Histidine kinase-like ATPase domain J165_03069 PF01740 STAS domain J165_03070 PF01740 STAS domain J165_03070 PF08678 Rsbr N terminal J165_03072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03072 PF00183 Hsp90 protein J165_03073 PF12833 Helix-turn-helix domain J165_03075 PF05656 Protein of unknown function (DUF805) J165_03076 PF18073 Rubredoxin metal binding domain J165_03078 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J165_03079 PF00510 Cytochrome c oxidase subunit III J165_03080 PF00115 Cytochrome C and Quinol oxidase polypeptide I J165_03081 PF06481 COX Aromatic Rich Motif J165_03081 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J165_03083 PF02401 LytB protein J165_03084 PF01252 Signal peptidase (SPase) II J165_03085 PF00133 tRNA synthetases class I (I, L, M and V) J165_03085 PF06827 Zinc finger found in FPG and IleRS J165_03085 PF08264 Anticodon-binding domain of tRNA J165_03086 PF06574 FAD synthetase J165_03086 PF01687 Riboflavin kinase J165_03087 PF03023 Lipid II flippase MurJ J165_03088 PF01649 Ribosomal protein S20 J165_03089 PF01018 GTP1/OBG J165_03089 PF01926 50S ribosome-binding GTPase J165_03090 PF01016 Ribosomal L27 protein J165_03091 PF00829 Ribosomal prokaryotic L21 protein J165_03092 PF17755 UvrA DNA-binding domain J165_03092 PF17760 UvrA interaction domain J165_03092 PF00005 ABC transporter J165_03095 PF00378 Enoyl-CoA hydratase/isomerase J165_03101 PF04377 Arginine-tRNA-protein transferase, C terminus J165_03101 PF04376 Arginine-tRNA-protein transferase, N terminus J165_03103 PF02222 ATP-grasp domain J165_03108 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_03111 PF00196 Bacterial regulatory proteins, luxR family J165_03111 PF00072 Response regulator receiver domain J165_03112 PF07730 Histidine kinase J165_03114 PF03775 Septum formation inhibitor MinC, C-terminal domain J165_03114 PF05209 Septum formation inhibitor MinC, N-terminal domain J165_03115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_03116 PF03776 Septum formation topological specificity factor MinE J165_03118 PF00512 His Kinase A (phospho-acceptor) domain J165_03118 PF08521 Two-component sensor kinase N-terminal J165_03118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03119 PF00486 Transcriptional regulatory protein, C terminal J165_03119 PF00072 Response regulator receiver domain J165_03122 PF08019 Phosphoethanolamine transferase EptA/EptB J165_03122 PF00884 Sulfatase J165_03125 PF07690 Major Facilitator Superfamily J165_03128 PF02347 Glycine cleavage system P-protein J165_03129 PF00135 Carboxylesterase family J165_03130 PF00248 Aldo/keto reductase family J165_03131 PF18011 C-terminal domain found in long catalases J165_03131 PF00199 Catalase J165_03131 PF06628 Catalase-related immune-responsive J165_03139 PF09078 CheY binding J165_03139 PF02895 Signal transducing histidine kinase, homodimeric domain J165_03139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03139 PF01627 Hpt domain J165_03139 PF01584 CheW-like domain J165_03140 PF02203 Tar ligand binding domain homologue J165_03140 PF00672 HAMP domain J165_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03141 PF01584 CheW-like domain J165_03142 PF00990 Diguanylate cyclase, GGDEF domain J165_03142 PF00563 EAL domain J165_03142 PF13426 PAS domain J165_03143 PF01739 CheR methyltransferase, SAM binding domain J165_03143 PF03705 CheR methyltransferase, all-alpha domain J165_03144 PF00072 Response regulator receiver domain J165_03144 PF01339 CheB methylesterase J165_03145 PF13091 PLD-like domain J165_03146 PF05649 Peptidase family M13 J165_03146 PF01431 Peptidase family M13 J165_03148 PF00300 Histidine phosphatase superfamily (branch 1) J165_03149 PF04493 Endonuclease V J165_03151 PF02678 Pirin J165_03151 PF05726 Pirin C-terminal cupin domain J165_03154 PF02678 Pirin J165_03154 PF05726 Pirin C-terminal cupin domain J165_03155 PF13722 5TM C-terminal transporter carbon starvation CstA J165_03155 PF02554 Carbon starvation protein CstA J165_03156 PF04328 Selenoprotein, putative J165_03164 PF02625 XdhC and CoxI family J165_03164 PF13478 XdhC Rossmann domain J165_03165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_03165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J165_03166 PF03450 CO dehydrogenase flavoprotein C-terminal domain J165_03166 PF00941 FAD binding domain in molybdopterin dehydrogenase J165_03167 PF01799 [2Fe-2S] binding domain J165_03167 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_03167 PF10518 TAT (twin-arginine translocation) pathway signal sequence J165_03168 PF14765 Polyketide synthase dehydratase J165_03168 PF00550 Phosphopantetheine attachment site J165_03168 PF08659 KR domain J165_03168 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_03168 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_03168 PF16197 Ketoacyl-synthetase C-terminal extension J165_03168 PF09277 Erythronolide synthase, docking J165_03168 PF08990 Erythronolide synthase docking J165_03168 PF08240 Alcohol dehydrogenase GroES-like domain J165_03168 PF00698 Acyl transferase domain J165_03169 PF00990 Diguanylate cyclase, GGDEF domain J165_03169 PF01590 GAF domain J165_03169 PF00563 EAL domain J165_03169 PF00360 Phytochrome region J165_03170 PF00436 Single-strand binding protein family J165_03171 PF00348 Polyprenyl synthetase J165_03173 PF02875 Mur ligase family, glutamate ligase domain J165_03173 PF08245 Mur ligase middle domain J165_03176 PF00696 Amino acid kinase family J165_03176 PF01842 ACT domain J165_03177 PF02567 Phenazine biosynthesis-like protein J165_03178 PF02567 Phenazine biosynthesis-like protein J165_03180 PF02566 OsmC-like protein J165_03181 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J165_03181 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J165_03182 PF03652 Holliday junction resolvase J165_03183 PF02622 Uncharacterized ACR, COG1678 J165_03184 PF00958 GMP synthase C terminal domain J165_03184 PF00117 Glutamine amidotransferase class-I J165_03184 PF03352 Methyladenine glycosylase J165_03184 PF13673 Acetyltransferase (GNAT) domain J165_03184 PF13302 Acetyltransferase (GNAT) domain J165_03187 PF03211 Pectate lyase J165_03188 PF00437 Type II/IV secretion system protein J165_03189 PF00437 Type II/IV secretion system protein J165_03190 PF01168 Alanine racemase, N-terminal domain J165_03191 PF03807 NADP oxidoreductase coenzyme F420-dependent J165_03191 PF14748 Pyrroline-5-carboxylate reductase dimerisation J165_03193 PF01551 Peptidase family M23 J165_03197 PF01965 DJ-1/PfpI family J165_03199 PF02082 Transcriptional regulator J165_03200 PF01458 Uncharacterized protein family (UPF0051) J165_03201 PF00005 ABC transporter J165_03202 PF01458 Uncharacterized protein family (UPF0051) J165_03203 PF00266 Aminotransferase class-V J165_03205 PF00355 Rieske [2Fe-2S] domain J165_03206 PF07715 TonB-dependent Receptor Plug Domain J165_03206 PF00593 TonB dependent receptor J165_03207 PF18331 PKHD-type hydroxylase C-terminal domain J165_03207 PF13640 2OG-Fe(II) oxygenase superfamily J165_03212 PF02424 ApbE family J165_03213 PF00667 FAD binding domain J165_03213 PF00175 Oxidoreductase NAD-binding domain J165_03213 PF00258 Flavodoxin J165_03217 PF07687 Peptidase dimerisation domain J165_03217 PF01546 Peptidase family M20/M25/M40 J165_03219 PF01636 Phosphotransferase enzyme family J165_03220 PF00483 Nucleotidyl transferase J165_03221 PF00308 Bacterial dnaA protein J165_03222 PF01594 AI-2E family transporter J165_03224 PF00586 AIR synthase related protein, N-terminal domain J165_03224 PF02769 AIR synthase related protein, C-terminal domain J165_03226 PF00551 Formyl transferase J165_03230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J165_03231 PF01722 BolA-like protein J165_03232 PF01380 SIS domain J165_03232 PF00571 CBS domain J165_03235 PF03968 OstA-like protein J165_03236 PF00005 ABC transporter J165_03237 PF00309 Sigma-54 factor, Activator interacting domain (AID) J165_03237 PF04963 Sigma-54 factor, core binding domain J165_03237 PF04552 Sigma-54, DNA binding domain J165_03238 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J165_03239 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J165_03240 PF07475 HPr Serine kinase C-terminal domain J165_03240 PF02603 HPr Serine kinase N terminus J165_03241 PF03668 P-loop ATPase protein family J165_03243 PF00381 PTS HPr component phosphorylation site J165_03244 PF05524 PEP-utilising enzyme, N-terminal J165_03244 PF00391 PEP-utilising enzyme, mobile domain J165_03244 PF02896 PEP-utilising enzyme, TIM barrel domain J165_03245 PF00571 CBS domain J165_03245 PF01769 Divalent cation transporter J165_03245 PF03448 MgtE intracellular N domain J165_03246 PF00756 Putative esterase J165_03247 PF02322 Cytochrome bd terminal oxidase subunit II J165_03248 PF01654 Cytochrome bd terminal oxidase subunit I J165_03250 PF00324 Amino acid permease J165_03251 PF00544 Pectate lyase J165_03252 PF00561 alpha/beta hydrolase fold J165_03253 PF00196 Bacterial regulatory proteins, luxR family J165_03254 PF00324 Amino acid permease J165_03259 PF12706 Beta-lactamase superfamily domain J165_03260 PF04820 Tryptophan halogenase J165_03265 PF00376 MerR family regulatory protein J165_03265 PF09278 MerR, DNA binding J165_03266 PF07690 Major Facilitator Superfamily J165_03268 PF03738 Glutathionylspermidine synthase preATP-grasp J165_03273 PF04012 PspA/IM30 family J165_03275 PF01243 Pyridoxamine 5'-phosphate oxidase J165_03275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J165_03276 PF01202 Shikimate kinase J165_03277 PF01761 3-dehydroquinate synthase J165_03279 PF01208 Uroporphyrinogen decarboxylase (URO-D) J165_03292 PF01590 GAF domain J165_03292 PF02954 Bacterial regulatory protein, Fis family J165_03292 PF00158 Sigma-54 interaction domain J165_03293 PF07690 Major Facilitator Superfamily J165_03294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03294 PF17149 Periplasmic sensor domain found in signal transduction proteins J165_03294 PF00512 His Kinase A (phospho-acceptor) domain J165_03294 PF01627 Hpt domain J165_03294 PF00672 HAMP domain J165_03294 PF00072 Response regulator receiver domain J165_03295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03295 PF00512 His Kinase A (phospho-acceptor) domain J165_03295 PF01627 Hpt domain J165_03295 PF17149 Periplasmic sensor domain found in signal transduction proteins J165_03295 PF00072 Response regulator receiver domain J165_03295 PF00672 HAMP domain J165_03297 PF00512 His Kinase A (phospho-acceptor) domain J165_03297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03297 PF01627 Hpt domain J165_03297 PF00072 Response regulator receiver domain J165_03298 PF04264 YceI-like domain J165_03302 PF03313 Serine dehydratase alpha chain J165_03302 PF03315 Serine dehydratase beta chain J165_03303 PF12697 Alpha/beta hydrolase family J165_03304 PF03447 Homoserine dehydrogenase, NAD binding domain J165_03304 PF00742 Homoserine dehydrogenase J165_03304 PF00696 Amino acid kinase family J165_03305 PF01053 Cys/Met metabolism PLP-dependent enzyme J165_03306 PF00561 alpha/beta hydrolase fold J165_03308 PF01476 LysM domain J165_03308 PF08525 Opacity-associated protein A N-terminal motif J165_03308 PF01551 Peptidase family M23 J165_03309 PF16658 Class II release factor RF3, C-terminal domain J165_03309 PF00009 Elongation factor Tu GTP binding domain J165_03310 PF03006 Haemolysin-III related J165_03311 PF05170 AsmA family J165_03312 PF00478 IMP dehydrogenase / GMP reductase domain J165_03312 PF00571 CBS domain J165_03313 PF00535 Glycosyl transferase family 2 J165_03314 PF00912 Transglycosylase J165_03315 PF01430 Hsp33 protein J165_03317 PF00593 TonB dependent receptor J165_03317 PF07715 TonB-dependent Receptor Plug Domain J165_03319 PF00440 Bacterial regulatory proteins, tetR family J165_03320 PF00561 alpha/beta hydrolase fold J165_03321 PF09317 Domain of unknown function (DUF1974) J165_03321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_03326 PF01597 Glycine cleavage H-protein J165_03327 PF08669 Glycine cleavage T-protein C-terminal barrel domain J165_03327 PF01571 Aminomethyltransferase folate-binding domain J165_03329 PF01145 SPFH domain / Band 7 family J165_03329 PF16200 C-terminal region of band_7 J165_03330 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J165_03331 PF03819 MazG nucleotide pyrophosphohydrolase domain J165_03332 PF00459 Inositol monophosphatase family J165_03333 PF00293 NUDIX domain J165_03334 PF00202 Aminotransferase class-III J165_03335 PF04452 RNA methyltransferase J165_03336 PF02685 Glucokinase J165_03339 PF01476 LysM domain J165_03339 PF00704 Glycosyl hydrolases family 18 J165_03340 PF07691 PA14 domain J165_03340 PF00728 Glycosyl hydrolase family 20, catalytic domain J165_03340 PF02838 Glycosyl hydrolase family 20, domain 2 J165_03342 PF07691 PA14 domain J165_03342 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_03342 PF14310 Fibronectin type III-like domain J165_03342 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_03344 PF01301 Glycosyl hydrolases family 35 J165_03345 PF13520 Amino acid permease J165_03347 PF02056 Family 4 glycosyl hydrolase J165_03347 PF11975 Family 4 glycosyl hydrolase C-terminal domain J165_03349 PF17678 Glycosyl hydrolase family 92 N-terminal domain J165_03349 PF07971 Glycosyl hydrolase family 92 J165_03350 PF01301 Glycosyl hydrolases family 35 J165_03356 PF03932 CutC family J165_03357 PF01112 Asparaginase J165_03358 PF13302 Acetyltransferase (GNAT) domain J165_03361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03361 PF01584 CheW-like domain J165_03361 PF01627 Hpt domain J165_03361 PF00072 Response regulator receiver domain J165_03362 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03362 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J165_03364 PF00072 Response regulator receiver domain J165_03365 PF00072 Response regulator receiver domain J165_03366 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J165_03366 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J165_03368 PF03747 ADP-ribosylglycohydrolase J165_03369 PF00814 Glycoprotease family J165_03370 PF04851 Type III restriction enzyme, res subunit J165_03370 PF13307 Helicase C-terminal domain J165_03372 PF00905 Penicillin binding protein transpeptidase domain J165_03372 PF14814 Bifunctional transglycosylase second domain J165_03372 PF00912 Transglycosylase J165_03373 PF00535 Glycosyl transferase family 2 J165_03375 PF02824 TGS domain J165_03375 PF04607 Region found in RelA / SpoT proteins J165_03375 PF13291 ACT domain J165_03376 PF12706 Beta-lactamase superfamily domain J165_03377 PF03070 TENA/THI-4/PQQC family J165_03378 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J165_03379 PF13186 Iron-sulfur cluster-binding domain J165_03379 PF04055 Radical SAM superfamily J165_03382 PF02685 Glucokinase J165_03384 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J165_03384 PF00271 Helicase conserved C-terminal domain J165_03384 PF00270 DEAD/DEAH box helicase J165_03384 PF11898 Domain of unknown function (DUF3418) J165_03384 PF04408 Helicase associated domain (HA2) J165_03385 PF00210 Ferritin-like domain J165_03386 PF16124 RecQ zinc-binding J165_03386 PF09382 RQC domain J165_03386 PF00570 HRDC domain J165_03386 PF00271 Helicase conserved C-terminal domain J165_03386 PF00270 DEAD/DEAH box helicase J165_03393 PF02203 Tar ligand binding domain homologue J165_03393 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03393 PF00672 HAMP domain J165_03397 PF13426 PAS domain J165_03397 PF07536 HWE histidine kinase J165_03397 PF13581 Histidine kinase-like ATPase domain J165_03398 PF06508 Queuosine biosynthesis protein QueC J165_03400 PF04055 Radical SAM superfamily J165_03402 PF00691 OmpA family J165_03403 PF07676 WD40-like Beta Propeller Repeat J165_03403 PF04052 TolB amino-terminal domain J165_03405 PF02472 Biopolymer transport protein ExbD/TolR J165_03406 PF01618 MotA/TolQ/ExbB proton channel family J165_03407 PF03061 Thioesterase superfamily J165_03408 PF05496 Holliday junction DNA helicase RuvB P-loop domain J165_03408 PF05491 RuvB C-terminal winged helix domain J165_03408 PF17864 RuvB AAA lid domain J165_03410 PF02705 K+ potassium transporter J165_03411 PF07499 RuvA, C-terminal domain J165_03411 PF01330 RuvA N terminal domain J165_03412 PF02075 Crossover junction endodeoxyribonuclease RuvC J165_03413 PF01709 Transcriptional regulator J165_03416 PF00152 tRNA synthetases class II (D, K and N) J165_03416 PF01336 OB-fold nucleic acid binding domain J165_03416 PF02938 GAD domain J165_03419 PF07690 Major Facilitator Superfamily J165_03422 PF04185 Phosphoesterase family J165_03422 PF05506 Domain of unknown function (DUF756) J165_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03425 PF03466 LysR substrate binding domain J165_03427 PF12848 ABC transporter J165_03427 PF00005 ABC transporter J165_03428 PF07715 TonB-dependent Receptor Plug Domain J165_03428 PF00593 TonB dependent receptor J165_03430 PF00593 TonB dependent receptor J165_03430 PF07715 TonB-dependent Receptor Plug Domain J165_03431 PF00593 TonB dependent receptor J165_03431 PF07715 TonB-dependent Receptor Plug Domain J165_03432 PF00067 Cytochrome P450 J165_03433 PF02254 TrkA-N domain J165_03433 PF00999 Sodium/hydrogen exchanger family J165_03438 PF00593 TonB dependent receptor J165_03438 PF07660 Secretin and TonB N terminus short domain J165_03438 PF07715 TonB-dependent Receptor Plug Domain J165_03440 PF06276 Ferric iron reductase FhuF-like transporter J165_03440 PF04183 IucA / IucC family J165_03441 PF07690 Major Facilitator Superfamily J165_03443 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J165_03443 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J165_03446 PF02654 Cobalamin-5-phosphate synthase J165_03448 PF02277 Phosphoribosyltransferase J165_03449 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J165_03450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_03450 PF07685 CobB/CobQ-like glutamine amidotransferase domain J165_03451 PF00155 Aminotransferase class I and II J165_03453 PF03186 CobD/Cbib protein J165_03453 PF17113 Regulatory signalling modulator protein AmpE J165_03454 PF12557 Cob(I)alamin adenosyltransferase N terminal J165_03454 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J165_03457 PF00593 TonB dependent receptor J165_03457 PF07715 TonB-dependent Receptor Plug Domain J165_03459 PF10431 C-terminal, D2-small domain, of ClpB protein J165_03459 PF00004 ATPase family associated with various cellular activities (AAA) J165_03459 PF07724 AAA domain (Cdc48 subfamily) J165_03459 PF02861 Clp amino terminal domain, pathogenicity island component J165_03459 PF17871 AAA lid domain J165_03460 PF00005 ABC transporter J165_03461 PF00528 Binding-protein-dependent transport system inner membrane component J165_03462 PF09084 NMT1/THI5 like J165_03463 PF00248 Aldo/keto reductase family J165_03465 PF07715 TonB-dependent Receptor Plug Domain J165_03465 PF00593 TonB dependent receptor J165_03466 PF01541 GIY-YIG catalytic domain J165_03473 PF00593 TonB dependent receptor J165_03473 PF07715 TonB-dependent Receptor Plug Domain J165_03474 PF02358 Trehalose-phosphatase J165_03475 PF00723 Glycosyl hydrolases family 15 J165_03476 PF00982 Glycosyltransferase family 20 J165_03477 PF01011 PQQ enzyme repeat J165_03478 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03478 PF02203 Tar ligand binding domain homologue J165_03478 PF00672 HAMP domain J165_03479 PF04134 Protein of unknown function, DUF393 J165_03482 PF00849 RNA pseudouridylate synthase J165_03483 PF13525 Outer membrane lipoprotein J165_03485 PF00795 Carbon-nitrogen hydrolase J165_03485 PF02540 NAD synthase J165_03487 PF01527 Transposase J165_03488 PF13276 HTH-like domain J165_03488 PF00665 Integrase core domain J165_03488 PF13333 Integrase core domain J165_03491 PF13406 Transglycosylase SLT domain J165_03492 PF13700 Domain of unknown function (DUF4158) J165_03492 PF01526 Tn3 transposase DDE domain J165_03499 PF00665 Integrase core domain J165_03499 PF02796 Helix-turn-helix domain of resolvase J165_03500 PF01695 IstB-like ATP binding protein J165_03506 PF01527 Transposase J165_03507 PF13276 HTH-like domain J165_03507 PF00665 Integrase core domain J165_03507 PF13333 Integrase core domain J165_03513 PF00180 Isocitrate/isopropylmalate dehydrogenase J165_03515 PF00462 Glutaredoxin J165_03516 PF13181 Tetratricopeptide repeat J165_03516 PF01435 Peptidase family M48 J165_03517 PF00486 Transcriptional regulatory protein, C terminal J165_03517 PF00072 Response regulator receiver domain J165_03518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03518 PF00989 PAS fold J165_03518 PF11808 Phosphate regulon sensor protein PhoR J165_03518 PF00512 His Kinase A (phospho-acceptor) domain J165_03519 PF13090 Polyphosphate kinase C-terminal domain 2 J165_03519 PF17941 Polyphosphate kinase C-terminal domain 1 J165_03519 PF13089 Polyphosphate kinase N-terminal domain J165_03519 PF02503 Polyphosphate kinase middle domain J165_03520 PF02541 Ppx/GppA phosphatase family J165_03521 PF00534 Glycosyl transferases group 1 J165_03521 PF13439 Glycosyltransferase Family 4 J165_03522 PF01569 PAP2 superfamily J165_03524 PF00149 Calcineurin-like phosphoesterase J165_03528 PF04305 Protein of unknown function (DUF455) J165_03529 PF00156 Phosphoribosyl transferase domain J165_03532 PF02875 Mur ligase family, glutamate ligase domain J165_03532 PF08245 Mur ligase middle domain J165_03533 PF00300 Histidine phosphatase superfamily (branch 1) J165_03534 PF10459 Peptidase S46 J165_03535 PF10459 Peptidase S46 J165_03536 PF05506 Domain of unknown function (DUF756) J165_03536 PF04185 Phosphoesterase family J165_03538 PF08240 Alcohol dehydrogenase GroES-like domain J165_03538 PF00107 Zinc-binding dehydrogenase J165_03540 PF12857 TOBE-like domain J165_03540 PF17850 CysA C-terminal regulatory domain J165_03540 PF00005 ABC transporter J165_03541 PF00528 Binding-protein-dependent transport system inner membrane component J165_03542 PF00528 Binding-protein-dependent transport system inner membrane component J165_03544 PF00155 Aminotransferase class I and II J165_03546 PF00849 RNA pseudouridylate synthase J165_03548 PF00691 OmpA family J165_03548 PF05736 OprF membrane domain J165_03549 PF00107 Zinc-binding dehydrogenase J165_03549 PF08240 Alcohol dehydrogenase GroES-like domain J165_03550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_03552 PF00043 Glutathione S-transferase, C-terminal domain J165_03552 PF02798 Glutathione S-transferase, N-terminal domain J165_03553 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J165_03553 PF00056 lactate/malate dehydrogenase, NAD binding domain J165_03554 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J165_03557 PF01425 Amidase J165_03559 PF01474 Class-II DAHP synthetase family J165_03561 PF02600 Disulfide bond formation protein DsbB J165_03562 PF01196 Ribosomal protein L17 J165_03563 PF01000 RNA polymerase Rpb3/RpoA insert domain J165_03563 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J165_03563 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J165_03564 PF01479 S4 domain J165_03564 PF00163 Ribosomal protein S4/S9 N-terminal domain J165_03565 PF00411 Ribosomal protein S11 J165_03566 PF00416 Ribosomal protein S13/S18 J165_03567 PF00344 SecY translocase J165_03568 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J165_03569 PF00327 Ribosomal protein L30p/L7e J165_03570 PF00333 Ribosomal protein S5, N-terminal domain J165_03570 PF03719 Ribosomal protein S5, C-terminal domain J165_03571 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J165_03572 PF00347 Ribosomal protein L6 J165_03573 PF00410 Ribosomal protein S8 J165_03574 PF00253 Ribosomal protein S14p/S29e J165_03575 PF00281 Ribosomal protein L5 J165_03575 PF00673 ribosomal L5P family C-terminus J165_03576 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J165_03576 PF00467 KOW motif J165_03577 PF00238 Ribosomal protein L14p/L23e J165_03578 PF00366 Ribosomal protein S17 J165_03579 PF00831 Ribosomal L29 protein J165_03580 PF00252 Ribosomal protein L16p/L10e J165_03581 PF00189 Ribosomal protein S3, C-terminal domain J165_03581 PF07650 KH domain J165_03582 PF00237 Ribosomal protein L22p/L17e J165_03583 PF00203 Ribosomal protein S19 J165_03584 PF03947 Ribosomal Proteins L2, C-terminal domain J165_03584 PF00181 Ribosomal Proteins L2, RNA binding domain J165_03585 PF00276 Ribosomal protein L23 J165_03586 PF00573 Ribosomal protein L4/L1 family J165_03587 PF00297 Ribosomal protein L3 J165_03588 PF00338 Ribosomal protein S10p/S20e J165_03589 PF03144 Elongation factor Tu domain 2 J165_03589 PF00009 Elongation factor Tu GTP binding domain J165_03589 PF03143 Elongation factor Tu C-terminal domain J165_03590 PF14492 Elongation Factor G, domain II J165_03590 PF00679 Elongation factor G C-terminus J165_03590 PF03764 Elongation factor G, domain IV J165_03590 PF00009 Elongation factor Tu GTP binding domain J165_03590 PF03144 Elongation factor Tu domain 2 J165_03591 PF00177 Ribosomal protein S7p/S5e J165_03592 PF00164 Ribosomal protein S12/S23 J165_03593 PF04998 RNA polymerase Rpb1, domain 5 J165_03593 PF04997 RNA polymerase Rpb1, domain 1 J165_03593 PF04983 RNA polymerase Rpb1, domain 3 J165_03593 PF00623 RNA polymerase Rpb1, domain 2 J165_03593 PF05000 RNA polymerase Rpb1, domain 4 J165_03594 PF04560 RNA polymerase Rpb2, domain 7 J165_03594 PF00562 RNA polymerase Rpb2, domain 6 J165_03594 PF10385 RNA polymerase beta subunit external 1 domain J165_03594 PF04563 RNA polymerase beta subunit J165_03594 PF04561 RNA polymerase Rpb2, domain 2 J165_03594 PF04565 RNA polymerase Rpb2, domain 3 J165_03596 PF00542 Ribosomal protein L7/L12 C-terminal domain J165_03596 PF16320 Ribosomal protein L7/L12 dimerisation domain J165_03597 PF00466 Ribosomal protein L10 J165_03598 PF00687 Ribosomal protein L1p/L10e family J165_03599 PF03946 Ribosomal protein L11, N-terminal domain J165_03599 PF00298 Ribosomal protein L11, RNA binding domain J165_03600 PF02357 Transcription termination factor nusG J165_03600 PF00467 KOW motif J165_03601 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J165_03603 PF03144 Elongation factor Tu domain 2 J165_03603 PF00009 Elongation factor Tu GTP binding domain J165_03603 PF03143 Elongation factor Tu C-terminal domain J165_03607 PF06071 Protein of unknown function (DUF933) J165_03607 PF01926 50S ribosome-binding GTPase J165_03608 PF01195 Peptidyl-tRNA hydrolase J165_03609 PF01386 Ribosomal L25p family J165_03609 PF14693 Ribosomal protein TL5, C-terminal domain J165_03610 PF14572 Phosphoribosyl synthetase-associated domain J165_03610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J165_03612 PF08544 GHMP kinases C terminal J165_03612 PF00288 GHMP kinases N terminal domain J165_03613 PF03550 Outer membrane lipoprotein LolB J165_03615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J165_03615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J165_03615 PF01488 Shikimate / quinate 5-dehydrogenase J165_03616 PF03462 PCRF domain J165_03616 PF00472 RF-1 domain J165_03618 PF00994 Probable molybdopterin binding domain J165_03619 PF03976 Polyphosphate kinase 2 (PPK2) J165_03621 PF00708 Acylphosphatase J165_03622 PF08534 Redoxin J165_03623 PF03631 Virulence factor BrkB J165_03624 PF03358 NADPH-dependent FMN reductase J165_03627 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J165_03627 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J165_03629 PF04073 Aminoacyl-tRNA editing domain J165_03630 PF00082 Subtilase family J165_03630 PF04151 Bacterial pre-peptidase C-terminal domain J165_03631 PF00082 Subtilase family J165_03631 PF04151 Bacterial pre-peptidase C-terminal domain J165_03632 PF00082 Subtilase family J165_03632 PF04151 Bacterial pre-peptidase C-terminal domain J165_03633 PF01063 Amino-transferase class IV J165_03636 PF02233 NAD(P) transhydrogenase beta subunit J165_03637 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J165_03641 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J165_03641 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J165_03641 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J165_03647 PF01612 3'-5' exonuclease J165_03647 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J165_03647 PF00476 DNA polymerase family A J165_03647 PF01367 5'-3' exonuclease, C-terminal SAM fold J165_03648 PF00293 NUDIX domain J165_03650 PF00561 alpha/beta hydrolase fold J165_03651 PF05175 Methyltransferase small domain J165_03651 PF17827 PrmC N-terminal domain J165_03652 PF00578 AhpC/TSA family J165_03652 PF10417 C-terminal domain of 1-Cys peroxiredoxin J165_03653 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_03653 PF13192 Thioredoxin domain J165_03654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03654 PF03466 LysR substrate binding domain J165_03655 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_03655 PF14760 Rnk N-terminus J165_03656 PF00923 Transaldolase/Fructose-6-phosphate aldolase J165_03658 PF01625 Peptide methionine sulfoxide reductase J165_03660 PF00072 Response regulator receiver domain J165_03660 PF00196 Bacterial regulatory proteins, luxR family J165_03661 PF00512 His Kinase A (phospho-acceptor) domain J165_03661 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03661 PF01627 Hpt domain J165_03661 PF00072 Response regulator receiver domain J165_03661 PF00672 HAMP domain J165_03661 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J165_03662 PF00072 Response regulator receiver domain J165_03662 PF00990 Diguanylate cyclase, GGDEF domain J165_03665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J165_03665 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_03666 PF00892 EamA-like transporter family J165_03669 PF01728 FtsJ-like methyltransferase J165_03669 PF18125 RlmM ferredoxin-like domain J165_03670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J165_03670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03671 PF08450 SMP-30/Gluconolactonase/LRE-like region J165_03675 PF00378 Enoyl-CoA hydratase/isomerase J165_03676 PF00171 Aldehyde dehydrogenase family J165_03677 PF13193 AMP-binding enzyme C-terminal domain J165_03677 PF00501 AMP-binding enzyme J165_03678 PF03466 LysR substrate binding domain J165_03678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03679 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J165_03679 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J165_03680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J165_03681 PF07729 FCD domain J165_03681 PF00392 Bacterial regulatory proteins, gntR family J165_03685 PF01494 FAD binding domain J165_03686 PF01494 FAD binding domain J165_03688 PF01923 Cobalamin adenosyltransferase J165_03689 PF00850 Histone deacetylase domain J165_03692 PF03968 OstA-like protein J165_03692 PF04453 LPS transport system D J165_03693 PF00639 PPIC-type PPIASE domain J165_03693 PF09312 SurA N-terminal domain J165_03694 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J165_03695 PF00398 Ribosomal RNA adenine dimethylase J165_03696 PF04379 ApaG domain J165_03697 PF00149 Calcineurin-like phosphoesterase J165_03698 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J165_03698 PF00005 ABC transporter J165_03700 PF00528 Binding-protein-dependent transport system inner membrane component J165_03701 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J165_03702 PF00296 Luciferase-like monooxygenase J165_03706 PF03358 NADPH-dependent FMN reductase J165_03707 PF00296 Luciferase-like monooxygenase J165_03709 PF00528 Binding-protein-dependent transport system inner membrane component J165_03710 PF00005 ABC transporter J165_03711 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J165_03711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03712 PF00158 Sigma-54 interaction domain J165_03713 PF00186 Dihydrofolate reductase J165_03715 PF00303 Thymidylate synthase J165_03716 PF01790 Prolipoprotein diacylglyceryl transferase J165_03720 PF01219 Prokaryotic diacylglycerol kinase J165_03722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03722 PF00512 His Kinase A (phospho-acceptor) domain J165_03722 PF08521 Two-component sensor kinase N-terminal J165_03723 PF00486 Transcriptional regulatory protein, C terminal J165_03723 PF00072 Response regulator receiver domain J165_03724 PF13472 GDSL-like Lipase/Acylhydrolase family J165_03725 PF00005 ABC transporter J165_03727 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J165_03729 PF00005 ABC transporter J165_03730 PF00528 Binding-protein-dependent transport system inner membrane component J165_03734 PF07715 TonB-dependent Receptor Plug Domain J165_03734 PF00593 TonB dependent receptor J165_03736 PF00248 Aldo/keto reductase family J165_03737 PF07670 Nucleoside recognition J165_03737 PF07662 Na+ dependent nucleoside transporter C-terminus J165_03737 PF01773 Na+ dependent nucleoside transporter N-terminus J165_03738 PF00294 pfkB family carbohydrate kinase J165_03741 PF01207 Dihydrouridine synthase (Dus) J165_03742 PF13649 Methyltransferase domain J165_03744 PF02772 S-adenosylmethionine synthetase, central domain J165_03744 PF00438 S-adenosylmethionine synthetase, N-terminal domain J165_03744 PF02773 S-adenosylmethionine synthetase, C-terminal domain J165_03745 PF00328 Histidine phosphatase superfamily (branch 2) J165_03750 PF00311 Phosphoenolpyruvate carboxylase J165_03753 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J165_03753 PF05221 S-adenosyl-L-homocysteine hydrolase J165_03754 PF13649 Methyltransferase domain J165_03760 PF00128 Alpha amylase, catalytic domain J165_03761 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03763 PF00082 Subtilase family J165_03763 PF09286 Pro-kumamolisin, activation domain J165_03764 PF08240 Alcohol dehydrogenase GroES-like domain J165_03764 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_03764 PF16197 Ketoacyl-synthetase C-terminal extension J165_03764 PF00107 Zinc-binding dehydrogenase J165_03764 PF00698 Acyl transferase domain J165_03764 PF00550 Phosphopantetheine attachment site J165_03764 PF08659 KR domain J165_03764 PF14765 Polyketide synthase dehydratase J165_03764 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_03767 PF02219 Methylenetetrahydrofolate reductase J165_03769 PF00293 NUDIX domain J165_03770 PF01043 SecA preprotein cross-linking domain J165_03770 PF02810 SEC-C motif J165_03770 PF07516 SecA Wing and Scaffold domain J165_03770 PF07517 SecA DEAD-like domain J165_03771 PF01551 Peptidase family M23 J165_03771 PF01476 LysM domain J165_03771 PF08525 Opacity-associated protein A N-terminal motif J165_03773 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J165_03774 PF00091 Tubulin/FtsZ family, GTPase domain J165_03774 PF12327 FtsZ family, C-terminal domain J165_03775 PF02491 SHS2 domain inserted in FTSA J165_03776 PF08478 POTRA domain, FtsQ-type J165_03776 PF03799 Cell division protein FtsQ J165_03777 PF01820 D-ala D-ala ligase N-terminus J165_03777 PF07478 D-ala D-ala ligase C-terminus J165_03778 PF02875 Mur ligase family, glutamate ligase domain J165_03778 PF08245 Mur ligase middle domain J165_03778 PF01225 Mur ligase family, catalytic domain J165_03779 PF03033 Glycosyltransferase family 28 N-terminal domain J165_03779 PF04101 Glycosyltransferase family 28 C-terminal domain J165_03780 PF04101 Glycosyltransferase family 28 C-terminal domain J165_03780 PF03033 Glycosyltransferase family 28 N-terminal domain J165_03781 PF01098 Cell cycle protein J165_03782 PF00953 Glycosyl transferase family 4 J165_03783 PF08245 Mur ligase middle domain J165_03783 PF01225 Mur ligase family, catalytic domain J165_03783 PF02875 Mur ligase family, glutamate ligase domain J165_03784 PF02875 Mur ligase family, glutamate ligase domain J165_03784 PF08245 Mur ligase middle domain J165_03784 PF01225 Mur ligase family, catalytic domain J165_03785 PF03717 Penicillin-binding Protein dimerisation domain J165_03785 PF00905 Penicillin binding protein transpeptidase domain J165_03786 PF04999 Cell division protein FtsL J165_03787 PF01795 MraW methylase family J165_03788 PF02381 MraZ protein, putative antitoxin-like J165_03794 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_03796 PF02021 Uncharacterised protein family UPF0102 J165_03797 PF04307 LexA-binding, inner membrane-associated putative hydrolase J165_03798 PF01565 FAD binding domain J165_03798 PF02913 FAD linked oxidases, C-terminal domain J165_03801 PF00072 Response regulator receiver domain J165_03801 PF00486 Transcriptional regulatory protein, C terminal J165_03802 PF13493 Domain of unknown function (DUF4118) J165_03802 PF13492 GAF domain J165_03802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03802 PF02702 Osmosensitive K+ channel His kinase sensor domain J165_03802 PF00512 His Kinase A (phospho-acceptor) domain J165_03803 PF02669 K+-transporting ATPase, c chain J165_03805 PF03814 Potassium-transporting ATPase A subunit J165_03809 PF00586 AIR synthase related protein, N-terminal domain J165_03809 PF02769 AIR synthase related protein, C-terminal domain J165_03810 PF01029 NusB family J165_03811 PF00885 6,7-dimethyl-8-ribityllumazine synthase J165_03812 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J165_03812 PF00925 GTP cyclohydrolase II J165_03813 PF00677 Lumazine binding domain J165_03816 PF01872 RibD C-terminal domain J165_03816 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J165_03818 PF03477 ATP cone domain J165_03819 PF00464 Serine hydroxymethyltransferase J165_03821 PF12848 ABC transporter J165_03821 PF00005 ABC transporter J165_03823 PF00892 EamA-like transporter family J165_03824 PF02567 Phenazine biosynthesis-like protein J165_03825 PF00155 Aminotransferase class I and II J165_03825 PF00392 Bacterial regulatory proteins, gntR family J165_03826 PF00756 Putative esterase J165_03827 PF04828 Glutathione-dependent formaldehyde-activating enzyme J165_03828 PF00107 Zinc-binding dehydrogenase J165_03828 PF08240 Alcohol dehydrogenase GroES-like domain J165_03829 PF02583 Metal-sensitive transcriptional repressor J165_03832 PF00486 Transcriptional regulatory protein, C terminal J165_03832 PF00072 Response regulator receiver domain J165_03833 PF00512 His Kinase A (phospho-acceptor) domain J165_03833 PF00672 HAMP domain J165_03833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03834 PF04107 Glutamate-cysteine ligase family 2(GCS2) J165_03836 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J165_03836 PF00753 Metallo-beta-lactamase superfamily J165_03836 PF10996 Beta-Casp domain J165_03837 PF01926 50S ribosome-binding GTPase J165_03838 PF00034 Cytochrome c J165_03841 PF01323 DSBA-like thioredoxin domain J165_03843 PF02028 BCCT, betaine/carnitine/choline family transporter J165_03844 PF00171 Aldehyde dehydrogenase family J165_03845 PF05199 GMC oxidoreductase J165_03845 PF00732 GMC oxidoreductase J165_03846 PF01966 HD domain J165_03846 PF01743 Poly A polymerase head domain J165_03846 PF12627 Probable RNA and SrmB- binding site of polymerase A J165_03848 PF01979 Amidohydrolase family J165_03849 PF01380 SIS domain J165_03850 PF00356 Bacterial regulatory proteins, lacI family J165_03851 PF07690 Major Facilitator Superfamily J165_03856 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_03856 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_03856 PF00703 Glycosyl hydrolases family 2 J165_03856 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J165_03856 PF16355 Domain of unknown function (DUF4982) J165_03861 PF03934 Type II secretion system (T2SS), protein K J165_03862 PF11612 Type II secretion system (T2SS), protein J J165_03862 PF07963 Prokaryotic N-terminal methylation motif J165_03864 PF07963 Prokaryotic N-terminal methylation motif J165_03864 PF12019 Type II transport protein GspH J165_03865 PF08334 Type II secretion system (T2SS), protein G J165_03865 PF07963 Prokaryotic N-terminal methylation motif J165_03866 PF00482 Type II secretion system (T2SS), protein F J165_03867 PF00437 Type II/IV secretion system protein J165_03868 PF00263 Bacterial type II and III secretion system protein J165_03868 PF03958 Bacterial type II/III secretion system short domain J165_03876 PF00106 short chain dehydrogenase J165_03877 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J165_03878 PF00512 His Kinase A (phospho-acceptor) domain J165_03878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03879 PF00072 Response regulator receiver domain J165_03880 PF08446 PAS fold J165_03880 PF00512 His Kinase A (phospho-acceptor) domain J165_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03880 PF01590 GAF domain J165_03880 PF00360 Phytochrome region J165_03881 PF04972 BON domain J165_03882 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03882 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J165_03883 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_03883 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J165_03890 PF00293 NUDIX domain J165_03890 PF01467 Cytidylyltransferase-like J165_03892 PF03466 LysR substrate binding domain J165_03892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03894 PF11818 C-terminal domain of tail specific protease (DUF3340) J165_03894 PF17804 Tail specific protease N-terminal domain J165_03894 PF03572 Peptidase family S41 J165_03894 PF00595 PDZ domain J165_03895 PF04055 Radical SAM superfamily J165_03895 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J165_03896 PF03099 Biotin/lipoate A/B protein ligase family J165_03897 PF04359 Protein of unknown function (DUF493) J165_03899 PF07943 Penicillin-binding protein 5, C-terminal domain J165_03899 PF00768 D-alanyl-D-alanine carboxypeptidase J165_03900 PF03330 Lytic transglycolase J165_03900 PF05036 Sporulation related domain J165_03901 PF13406 Transglycosylase SLT domain J165_03902 PF00295 Glycosyl hydrolases family 28 J165_03903 PF01098 Cell cycle protein J165_03904 PF03717 Penicillin-binding Protein dimerisation domain J165_03904 PF00905 Penicillin binding protein transpeptidase domain J165_03906 PF04085 rod shape-determining protein MreC J165_03908 PF00294 pfkB family carbohydrate kinase J165_03909 PF02954 Bacterial regulatory protein, Fis family J165_03909 PF01590 GAF domain J165_03909 PF00158 Sigma-54 interaction domain J165_03911 PF00107 Zinc-binding dehydrogenase J165_03911 PF08240 Alcohol dehydrogenase GroES-like domain J165_03914 PF00497 Bacterial extracellular solute-binding proteins, family 3 J165_03915 PF13360 PQQ-like domain J165_03918 PF01433 Peptidase family M1 domain J165_03918 PF11838 ERAP1-like C-terminal domain J165_03919 PF00990 Diguanylate cyclase, GGDEF domain J165_03919 PF03707 Bacterial signalling protein N terminal repeat J165_03919 PF00563 EAL domain J165_03920 PF01209 ubiE/COQ5 methyltransferase family J165_03922 PF13533 Biotin-lipoyl like J165_03923 PF13673 Acetyltransferase (GNAT) domain J165_03925 PF10431 C-terminal, D2-small domain, of ClpB protein J165_03925 PF00004 ATPase family associated with various cellular activities (AAA) J165_03925 PF07724 AAA domain (Cdc48 subfamily) J165_03926 PF00227 Proteasome subunit J165_03927 PF00589 Phage integrase family J165_03927 PF02899 Phage integrase, N-terminal SAM-like domain J165_03929 PF01678 Diaminopimelate epimerase J165_03931 PF04304 Protein of unknown function (DUF454) J165_03932 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J165_03932 PF00326 Prolyl oligopeptidase family J165_03933 PF00155 Aminotransferase class I and II J165_03935 PF00326 Prolyl oligopeptidase family J165_03935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J165_03940 PF03900 Porphobilinogen deaminase, C-terminal domain J165_03940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J165_03941 PF00072 Response regulator receiver domain J165_03941 PF04397 LytTr DNA-binding domain J165_03942 PF06580 Histidine kinase J165_03942 PF07694 5TMR of 5TMR-LYT J165_03944 PF13632 Glycosyl transferase family group 2 J165_03947 PF00990 Diguanylate cyclase, GGDEF domain J165_03947 PF08448 PAS fold J165_03948 PF01740 STAS domain J165_03948 PF00916 Sulfate permease family J165_03949 PF00150 Cellulase (glycosyl hydrolase family 5) J165_03949 PF00553 Cellulose binding domain J165_03950 PF00672 HAMP domain J165_03950 PF02203 Tar ligand binding domain homologue J165_03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03951 PF08448 PAS fold J165_03951 PF08447 PAS fold J165_03951 PF00990 Diguanylate cyclase, GGDEF domain J165_03951 PF00563 EAL domain J165_03956 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J165_03956 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_03958 PF01204 Trehalase J165_03960 PF01544 CorA-like Mg2+ transporter protein J165_03962 PF00324 Amino acid permease J165_03964 PF01695 IstB-like ATP binding protein J165_03965 PF02796 Helix-turn-helix domain of resolvase J165_03965 PF00665 Integrase core domain J165_03966 PF00497 Bacterial extracellular solute-binding proteins, family 3 J165_03967 PF00892 EamA-like transporter family J165_03972 PF00990 Diguanylate cyclase, GGDEF domain J165_03972 PF05230 MASE2 domain J165_03973 PF07759 Protein of unknown function (DUF1615) J165_03974 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_03974 PF00326 Prolyl oligopeptidase family J165_03975 PF03176 MMPL family J165_03975 PF12823 Domain of unknown function (DUF3817) J165_03980 PF13409 Glutathione S-transferase, N-terminal domain J165_03985 PF04002 RadC-like JAB domain J165_03990 PF00072 Response regulator receiver domain J165_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03990 PF13426 PAS domain J165_03991 PF02796 Helix-turn-helix domain of resolvase J165_03991 PF00665 Integrase core domain J165_03992 PF01695 IstB-like ATP binding protein J165_03997 PF00873 AcrB/AcrD/AcrF family J165_03998 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_03998 PF00529 HlyD membrane-fusion protein of T1SS J165_03999 PF00009 Elongation factor Tu GTP binding domain J165_04000 PF01507 Phosphoadenosine phosphosulfate reductase family J165_04001 PF00175 Oxidoreductase NAD-binding domain J165_04001 PF00667 FAD binding domain J165_04001 PF00258 Flavodoxin J165_04002 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J165_04002 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J165_04003 PF01507 Phosphoadenosine phosphosulfate reductase family J165_04007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04007 PF00512 His Kinase A (phospho-acceptor) domain J165_04007 PF01627 Hpt domain J165_04007 PF00072 Response regulator receiver domain J165_04009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04009 PF03466 LysR substrate binding domain J165_04010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_04010 PF10414 Sirohaem synthase dimerisation region J165_04010 PF14824 Sirohaem biosynthesis protein central J165_04011 PF00291 Pyridoxal-phosphate dependent enzyme J165_04013 PF01661 Macro domain J165_04014 PF00274 Fructose-bisphosphate aldolase class-I J165_04015 PF00224 Pyruvate kinase, barrel domain J165_04015 PF02887 Pyruvate kinase, alpha/beta domain J165_04017 PF00162 Phosphoglycerate kinase J165_04022 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J165_04022 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J165_04024 PF03922 OmpW family J165_04025 PF03922 OmpW family J165_04027 PF00753 Metallo-beta-lactamase superfamily J165_04027 PF04273 Putative phosphatase (DUF442) J165_04029 PF00528 Binding-protein-dependent transport system inner membrane component J165_04030 PF03459 TOBE domain J165_04030 PF00005 ABC transporter J165_04037 PF01476 LysM domain J165_04037 PF03734 L,D-transpeptidase catalytic domain J165_04038 PF01551 Peptidase family M23 J165_04038 PF04225 Opacity-associated protein A LysM-like domain J165_04040 PF00593 TonB dependent receptor J165_04040 PF07715 TonB-dependent Receptor Plug Domain J165_04041 PF12146 Serine aminopeptidase, S33 J165_04042 PF02780 Transketolase, C-terminal domain J165_04042 PF02779 Transketolase, pyrimidine binding domain J165_04042 PF00456 Transketolase, thiamine diphosphate binding domain J165_04043 PF00375 Sodium:dicarboxylate symporter family J165_04045 PF00092 von Willebrand factor type A domain J165_04045 PF07584 Aerotolerance regulator N-terminal J165_04049 PF17863 AAA lid domain J165_04049 PF07726 ATPase family associated with various cellular activities (AAA) J165_04051 PF07660 Secretin and TonB N terminus short domain J165_04051 PF03958 Bacterial type II/III secretion system short domain J165_04051 PF00263 Bacterial type II and III secretion system protein J165_04051 PF11741 AMIN domain J165_04056 PF17092 Penicillin-binding protein OB-like domain J165_04056 PF00912 Transglycosylase J165_04056 PF00905 Penicillin binding protein transpeptidase domain J165_04059 PF00285 Citrate synthase, C-terminal domain J165_04060 PF01197 Ribosomal protein L31 J165_04061 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_04062 PF17191 RecG wedge domain J165_04062 PF00271 Helicase conserved C-terminal domain J165_04062 PF00270 DEAD/DEAH box helicase J165_04063 PF01042 Endoribonuclease L-PSP J165_04064 PF02824 TGS domain J165_04064 PF04607 Region found in RelA / SpoT proteins J165_04064 PF13291 ACT domain J165_04065 PF01192 RNA polymerase Rpb6 J165_04066 PF00625 Guanylate kinase J165_04067 PF08340 Domain of unknown function (DUF1732) J165_04067 PF03755 YicC-like family, N-terminal region J165_04068 PF03725 3' exoribonuclease family, domain 2 J165_04068 PF01138 3' exoribonuclease family, domain 1 J165_04070 PF01725 Ham1 family J165_04071 PF04055 Radical SAM superfamily J165_04071 PF06969 HemN C-terminal domain J165_04074 PF00557 Metallopeptidase family M24 J165_04076 PF00557 Metallopeptidase family M24 J165_04076 PF05195 Aminopeptidase P, N-terminal domain J165_04077 PF03695 Uncharacterised protein family (UPF0149) J165_04079 PF05164 Cell division protein ZapA J165_04081 PF01812 5-formyltetrahydrofolate cyclo-ligase family J165_04083 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J165_04085 PF13369 Transglutaminase-like superfamily J165_04086 PF00301 Rubredoxin J165_04087 PF02581 Thiamine monophosphate synthase J165_04090 PF00202 Aminotransferase class-III J165_04091 PF00196 Bacterial regulatory proteins, luxR family J165_04091 PF17874 MalT-like TPR region J165_04092 PF00127 Copper binding proteins, plastocyanin/azurin family J165_04093 PF00155 Aminotransferase class I and II J165_04095 PF00034 Cytochrome c J165_04095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J165_04096 PF01593 Flavin containing amine oxidoreductase J165_04099 PF00202 Aminotransferase class-III J165_04100 PF00027 Cyclic nucleotide-binding domain J165_04100 PF00520 Ion transport protein J165_04103 PF01569 PAP2 superfamily J165_04104 PF01062 Bestrophin, RFP-TM, chloride channel J165_04106 PF02875 Mur ligase family, glutamate ligase domain J165_04106 PF08245 Mur ligase middle domain J165_04106 PF01225 Mur ligase family, catalytic domain J165_04108 PF00365 Phosphofructokinase J165_04110 PF03030 Inorganic H+ pyrophosphatase J165_04112 PF00719 Inorganic pyrophosphatase J165_04114 PF00593 TonB dependent receptor J165_04114 PF07715 TonB-dependent Receptor Plug Domain J165_04115 PF12833 Helix-turn-helix domain J165_04116 PF00486 Transcriptional regulatory protein, C terminal J165_04116 PF18500 CadC C-terminal domain 1 J165_04117 PF13667 ThiC-associated domain J165_04117 PF01964 Radical SAM ThiC family J165_04119 PF07715 TonB-dependent Receptor Plug Domain J165_04119 PF00593 TonB dependent receptor J165_04120 PF02203 Tar ligand binding domain homologue J165_04120 PF00672 HAMP domain J165_04120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_04122 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J165_04122 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J165_04123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J165_04123 PF00205 Thiamine pyrophosphate enzyme, central domain J165_04123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J165_04125 PF00291 Pyridoxal-phosphate dependent enzyme J165_04126 PF08502 LeuA allosteric (dimerisation) domain J165_04126 PF00682 HMGL-like J165_04127 PF00180 Isocitrate/isopropylmalate dehydrogenase J165_04128 PF00694 Aconitase C-terminal domain J165_04129 PF00330 Aconitase family (aconitate hydratase) J165_04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04131 PF17151 Periplasmic sensor domain J165_04131 PF00990 Diguanylate cyclase, GGDEF domain J165_04134 PF02321 Outer membrane efflux protein J165_04135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J165_04136 PF03279 Bacterial lipid A biosynthesis acyltransferase J165_04142 PF00390 Malic enzyme, N-terminal domain J165_04142 PF03949 Malic enzyme, NAD binding domain J165_04142 PF01515 Phosphate acetyl/butaryl transferase J165_04143 PF00375 Sodium:dicarboxylate symporter family J165_04145 PF02743 Cache domain J165_04145 PF00512 His Kinase A (phospho-acceptor) domain J165_04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04146 PF07690 Major Facilitator Superfamily J165_04148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04148 PF03466 LysR substrate binding domain J165_04149 PF00248 Aldo/keto reductase family J165_04153 PF00072 Response regulator receiver domain J165_04153 PF00196 Bacterial regulatory proteins, luxR family J165_04155 PF08521 Two-component sensor kinase N-terminal J165_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04155 PF00512 His Kinase A (phospho-acceptor) domain J165_04156 PF00486 Transcriptional regulatory protein, C terminal J165_04156 PF00072 Response regulator receiver domain J165_04158 PF03600 Citrate transporter J165_04160 PF00106 short chain dehydrogenase J165_04161 PF00356 Bacterial regulatory proteins, lacI family J165_04164 PF00128 Alpha amylase, catalytic domain J165_04167 PF03193 RsgA GTPase J165_04171 PF00593 TonB dependent receptor J165_04171 PF07715 TonB-dependent Receptor Plug Domain J165_04172 PF01522 Polysaccharide deacetylase J165_04173 PF00462 Glutaredoxin J165_04176 PF01527 Transposase J165_04181 PF02645 Uncharacterised protein, DegV family COG1307 J165_04182 PF01327 Polypeptide deformylase J165_04183 PF03960 ArsC family J165_04186 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J165_04187 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J165_04188 PF01270 Glycosyl hydrolases family 8 J165_04189 PF03170 Bacterial cellulose synthase subunit J165_04190 PF03552 Cellulose synthase J165_04190 PF00535 Glycosyl transferase family 2 J165_04190 PF07238 PilZ domain J165_04193 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J165_04193 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J165_04200 PF07715 TonB-dependent Receptor Plug Domain J165_04200 PF00593 TonB dependent receptor J165_04202 PF07702 UTRA domain J165_04202 PF00392 Bacterial regulatory proteins, gntR family J165_04204 PF00263 Bacterial type II and III secretion system protein J165_04204 PF03958 Bacterial type II/III secretion system short domain J165_04206 PF10741 Type II secretion system (T2SS), protein M subtype b J165_04207 PF05137 Fimbrial assembly protein (PilN) J165_04208 PF03934 Type II secretion system (T2SS), protein K J165_04210 PF07963 Prokaryotic N-terminal methylation motif J165_04211 PF12019 Type II transport protein GspH J165_04212 PF08334 Type II secretion system (T2SS), protein G J165_04213 PF00482 Type II secretion system (T2SS), protein F J165_04214 PF00437 Type II/IV secretion system protein J165_04214 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_04215 PF00082 Subtilase family J165_04215 PF04151 Bacterial pre-peptidase C-terminal domain J165_04216 PF03895 YadA-like membrane anchor domain J165_04216 PF05658 Head domain of trimeric autotransporter adhesin J165_04216 PF05662 Coiled stalk of trimeric autotransporter adhesin J165_04216 PF13018 Extended Signal Peptide of Type V secretion system J165_04217 PF04151 Bacterial pre-peptidase C-terminal domain J165_04217 PF00082 Subtilase family J165_04218 PF05658 Head domain of trimeric autotransporter adhesin J165_04218 PF13018 Extended Signal Peptide of Type V secretion system J165_04218 PF05662 Coiled stalk of trimeric autotransporter adhesin J165_04218 PF03895 YadA-like membrane anchor domain J165_04219 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J165_04219 PF02769 AIR synthase related protein, C-terminal domain J165_04219 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J165_04220 PF10411 Disulfide bond isomerase protein N-terminus J165_04220 PF13098 Thioredoxin-like domain J165_04221 PF00589 Phage integrase family J165_04221 PF02899 Phage integrase, N-terminal SAM-like domain J165_04224 PF03739 Lipopolysaccharide export system permease LptF/LptG J165_04226 PF02789 Cytosol aminopeptidase family, N-terminal domain J165_04226 PF00883 Cytosol aminopeptidase family, catalytic domain J165_04229 PF10458 Valyl tRNA synthetase tRNA binding arm J165_04229 PF00133 tRNA synthetases class I (I, L, M and V) J165_04229 PF08264 Anticodon-binding domain of tRNA J165_04230 PF07715 TonB-dependent Receptor Plug Domain J165_04230 PF00593 TonB dependent receptor J165_04231 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J165_04231 PF01464 Transglycosylase SLT domain J165_04232 PF00544 Pectate lyase J165_04235 PF01066 CDP-alcohol phosphatidyltransferase J165_04237 PF03129 Anticodon binding domain J165_04237 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_04237 PF04073 Aminoacyl-tRNA editing domain J165_04238 PF00816 H-NS histone family J165_04240 PF02405 Permease MlaE J165_04241 PF00005 ABC transporter J165_04242 PF03886 ABC-type transport auxiliary lipoprotein component J165_04242 PF02470 MlaD protein J165_04246 PF05045 Rhamnan synthesis protein F J165_04246 PF14307 Glycosyltransferase WbsX J165_04247 PF01144 Coenzyme A transferase J165_04248 PF01144 Coenzyme A transferase J165_04249 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_04249 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_04249 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_04249 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_04250 PF00483 Nucleotidyl transferase J165_04250 PF01050 Mannose-6-phosphate isomerase J165_04251 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_04251 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_04251 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_04252 PF04321 RmlD substrate binding domain J165_04253 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J165_04254 PF00483 Nucleotidyl transferase J165_04255 PF16363 GDP-mannose 4,6 dehydratase J165_04256 PF01012 Electron transfer flavoprotein domain J165_04257 PF00766 Electron transfer flavoprotein FAD-binding domain J165_04257 PF01012 Electron transfer flavoprotein domain J165_04259 PF01040 UbiA prenyltransferase family J165_04260 PF01565 FAD binding domain J165_04260 PF04030 D-arabinono-1,4-lactone oxidase J165_04261 PF00106 short chain dehydrogenase J165_04263 PF01370 NAD dependent epimerase/dehydratase family J165_04264 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_04264 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_04267 PF01209 ubiE/COQ5 methyltransferase family J165_04269 PF14307 Glycosyltransferase WbsX J165_04269 PF05045 Rhamnan synthesis protein F J165_04270 PF00535 Glycosyl transferase family 2 J165_04271 PF00132 Bacterial transferase hexapeptide (six repeats) J165_04272 PF00005 ABC transporter J165_04274 PF01053 Cys/Met metabolism PLP-dependent enzyme J165_04275 PF00291 Pyridoxal-phosphate dependent enzyme J165_04275 PF00571 CBS domain J165_04279 PF00437 Type II/IV secretion system protein J165_04280 PF14497 Glutathione S-transferase, C-terminal domain J165_04280 PF02798 Glutathione S-transferase, N-terminal domain J165_04282 PF00271 Helicase conserved C-terminal domain J165_04282 PF00270 DEAD/DEAH box helicase J165_04284 PF07715 TonB-dependent Receptor Plug Domain J165_04284 PF00593 TonB dependent receptor J165_04285 PF01242 6-pyruvoyl tetrahydropterin synthase J165_04288 PF13185 GAF domain J165_04290 PF00756 Putative esterase J165_04291 PF07715 TonB-dependent Receptor Plug Domain J165_04291 PF00593 TonB dependent receptor J165_04292 PF13419 Haloacid dehalogenase-like hydrolase J165_04293 PF00817 impB/mucB/samB family J165_04293 PF11799 impB/mucB/samB family C-terminal domain J165_04294 PF07977 FabA-like domain J165_04295 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_04295 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_04297 PF01432 Peptidase family M3 J165_04300 PF07732 Multicopper oxidase J165_04300 PF07731 Multicopper oxidase J165_04300 PF00394 Multicopper oxidase J165_04301 PF05275 Copper resistance protein B precursor (CopB) J165_04302 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_04307 PF01380 SIS domain J165_04308 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_04309 PF12704 MacB-like periplasmic core domain J165_04309 PF00005 ABC transporter J165_04309 PF02687 FtsX-like permease family J165_04310 PF12704 MacB-like periplasmic core domain J165_04310 PF02687 FtsX-like permease family J165_04311 PF12704 MacB-like periplasmic core domain J165_04311 PF02687 FtsX-like permease family J165_04313 PF00072 Response regulator receiver domain J165_04313 PF02954 Bacterial regulatory protein, Fis family J165_04313 PF00158 Sigma-54 interaction domain J165_04314 PF00512 His Kinase A (phospho-acceptor) domain J165_04314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04315 PF00132 Bacterial transferase hexapeptide (six repeats) J165_04315 PF12804 MobA-like NTP transferase domain J165_04315 PF14602 Hexapeptide repeat of succinyl-transferase J165_04319 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J165_04319 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J165_04320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04320 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_04321 PF00231 ATP synthase J165_04322 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04322 PF00306 ATP synthase alpha/beta chain, C terminal domain J165_04322 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_04323 PF00213 ATP synthase delta (OSCP) subunit J165_04324 PF00430 ATP synthase B/B' CF(0) J165_04325 PF00137 ATP synthase subunit C J165_04326 PF00119 ATP synthase A chain J165_04330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_04332 PF02817 e3 binding domain J165_04332 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_04332 PF00364 Biotin-requiring enzyme J165_04338 PF03180 NLPA lipoprotein J165_04339 PF00528 Binding-protein-dependent transport system inner membrane component J165_04340 PF09383 NIL domain J165_04340 PF00005 ABC transporter J165_04341 PF00892 EamA-like transporter family J165_04342 PF04461 Protein of unknown function (DUF520) J165_04344 PF00512 His Kinase A (phospho-acceptor) domain J165_04344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04344 PF00072 Response regulator receiver domain J165_04344 PF18415 Histidine kinase receptor ArcB trans-membrane domain J165_04344 PF00989 PAS fold J165_04344 PF01627 Hpt domain J165_04349 PF13419 Haloacid dehalogenase-like hydrolase J165_04350 PF00849 RNA pseudouridylate synthase J165_04350 PF01479 S4 domain J165_04351 PF08468 Methyltransferase small domain N-terminal J165_04351 PF05175 Methyltransferase small domain J165_04353 PF07995 Glucose / Sorbosone dehydrogenase J165_04355 PF00989 PAS fold J165_04355 PF00512 His Kinase A (phospho-acceptor) domain J165_04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04359 PF00842 Alanine racemase, C-terminal domain J165_04359 PF01168 Alanine racemase, N-terminal domain J165_04360 PF01266 FAD dependent oxidoreductase J165_04361 PF01037 Lrp/AsnC ligand binding domain J165_04363 PF01641 SelR domain J165_04365 PF01618 MotA/TolQ/ExbB proton channel family J165_04366 PF13677 Membrane MotB of proton-channel complex MotA/MotB J165_04366 PF00691 OmpA family J165_04371 PF01061 ABC-2 type transporter J165_04372 PF00005 ABC transporter J165_04373 PF00999 Sodium/hydrogen exchanger family J165_04374 PF02469 Fasciclin domain J165_04375 PF03167 Uracil DNA glycosylase superfamily J165_04377 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J165_04379 PF03466 LysR substrate binding domain J165_04379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04380 PF03358 NADPH-dependent FMN reductase J165_04381 PF00248 Aldo/keto reductase family J165_04383 PF05649 Peptidase family M13 J165_04383 PF01431 Peptidase family M13 J165_04387 PF13520 Amino acid permease J165_04389 PF00072 Response regulator receiver domain J165_04389 PF04397 LytTr DNA-binding domain J165_04390 PF00672 HAMP domain J165_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04390 PF02743 Cache domain J165_04390 PF06580 Histidine kinase J165_04393 PF05974 Domain of unknown function (DUF892) J165_04394 PF05067 Manganese containing catalase J165_04397 PF01739 CheR methyltransferase, SAM binding domain J165_04397 PF01339 CheB methylesterase J165_04397 PF08448 PAS fold J165_04397 PF03705 CheR methyltransferase, all-alpha domain J165_04400 PF00158 Sigma-54 interaction domain J165_04400 PF02954 Bacterial regulatory protein, Fis family J165_04400 PF00072 Response regulator receiver domain J165_04402 PF01654 Cytochrome bd terminal oxidase subunit I J165_04403 PF02322 Cytochrome bd terminal oxidase subunit II J165_04407 PF16363 GDP-mannose 4,6 dehydratase J165_04409 PF03275 UDP-galactopyranose mutase J165_04411 PF00005 ABC transporter J165_04411 PF00664 ABC transporter transmembrane region J165_04414 PF08240 Alcohol dehydrogenase GroES-like domain J165_04414 PF00107 Zinc-binding dehydrogenase J165_04414 PF13823 Alcohol dehydrogenase GroES-associated J165_04423 PF00593 TonB dependent receptor J165_04423 PF07715 TonB-dependent Receptor Plug Domain J165_04426 PF00005 ABC transporter J165_04428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04428 PF03466 LysR substrate binding domain J165_04429 PF01042 Endoribonuclease L-PSP J165_04432 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_04432 PF00672 HAMP domain J165_04432 PF02203 Tar ligand binding domain homologue J165_04436 PF02525 Flavodoxin-like fold J165_04445 PF00557 Metallopeptidase family M24 J165_04448 PF01695 IstB-like ATP binding protein J165_04449 PF00665 Integrase core domain J165_04449 PF02796 Helix-turn-helix domain of resolvase J165_04450 PF01527 Transposase J165_04451 PF13333 Integrase core domain J165_04451 PF00665 Integrase core domain J165_04451 PF13276 HTH-like domain J165_04454 PF00717 Peptidase S24-like J165_04455 PF11799 impB/mucB/samB family C-terminal domain J165_04455 PF11798 IMS family HHH motif J165_04455 PF00817 impB/mucB/samB family J165_04455 PF13438 Domain of unknown function (DUF4113) J165_04459 PF01555 DNA methylase J165_04469 PF00182 Chitinase class I J165_04494 PF01695 IstB-like ATP binding protein J165_04495 PF02796 Helix-turn-helix domain of resolvase J165_04495 PF00665 Integrase core domain J165_04511 PF04546 Sigma-70, non-essential region J165_04511 PF04545 Sigma-70, region 4 J165_04511 PF04539 Sigma-70 region 3 J165_04511 PF04542 Sigma-70 region 2 J165_04511 PF00140 Sigma-70 factor, region 1.2 J165_04511 PF03979 Sigma-70 factor, region 1.1 J165_04512 PF02580 D-Tyr-tRNA(Tyr) deacylase J165_04513 PF03279 Bacterial lipid A biosynthesis acyltransferase J165_04515 PF00925 GTP cyclohydrolase II J165_04519 PF00535 Glycosyl transferase family 2 J165_04522 PF01029 NusB family J165_04522 PF01189 16S rRNA methyltransferase RsmB/F J165_04523 PF00551 Formyl transferase J165_04523 PF02911 Formyl transferase, C-terminal domain J165_04524 PF01327 Polypeptide deformylase J165_04525 PF01476 LysM domain J165_04526 PF17782 DprA winged helix domain J165_04526 PF02481 DNA recombination-mediator protein A J165_04527 PF04361 Protein of unknown function (DUF494) J165_04528 PF07963 Prokaryotic N-terminal methylation motif J165_04528 PF00114 Pilin (bacterial filament) J165_04530 PF01751 Toprim domain J165_04530 PF13368 Topoisomerase C-terminal repeat J165_04530 PF01131 DNA topoisomerase J165_04531 PF01300 Telomere recombination J165_04536 PF01343 Peptidase family S49 J165_04537 PF01554 MatE J165_04541 PF18074 Primosomal protein N C-terminal domain J165_04541 PF00271 Helicase conserved C-terminal domain J165_04541 PF00270 DEAD/DEAH box helicase J165_04541 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J165_04541 PF17764 3′ DNA-binding domain (3′BD) J165_04542 PF13417 Glutathione S-transferase, N-terminal domain J165_04542 PF00043 Glutathione S-transferase, C-terminal domain J165_04545 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_04546 PF03458 UPF0126 domain J165_04547 PF04542 Sigma-70 region 2 J165_04547 PF04545 Sigma-70, region 4 J165_04548 PF03167 Uracil DNA glycosylase superfamily J165_04549 PF01339 CheB methylesterase J165_04549 PF00072 Response regulator receiver domain J165_04550 PF18075 FtsX extracellular domain J165_04551 PF00005 ABC transporter J165_04552 PF12300 ATP-dependent RNA helicase RhlB J165_04552 PF00271 Helicase conserved C-terminal domain J165_04552 PF00270 DEAD/DEAH box helicase J165_04553 PF00085 Thioredoxin J165_04554 PF07498 Rho termination factor, N-terminal domain J165_04554 PF07497 Rho termination factor, RNA-binding domain J165_04554 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04555 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J165_04556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04556 PF03466 LysR substrate binding domain J165_04558 PF03971 Monomeric isocitrate dehydrogenase J165_04561 PF09704 CRISPR-associated protein (Cas_Cas5) J165_04562 PF09704 CRISPR-associated protein (Cas_Cas5) J165_04566 PF01867 CRISPR associated protein Cas1 J165_04567 PF02796 Helix-turn-helix domain of resolvase J165_04567 PF00665 Integrase core domain J165_04568 PF01695 IstB-like ATP binding protein J165_04570 PF01476 LysM domain J165_04570 PF04972 BON domain J165_04571 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J165_04571 PF14489 QueF-like protein J165_04572 PF07687 Peptidase dimerisation domain J165_04572 PF01546 Peptidase family M20/M25/M40 J165_04573 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_04574 PF00873 AcrB/AcrD/AcrF family J165_04575 PF00873 AcrB/AcrD/AcrF family J165_04576 PF07063 Domain of unknown function (DUF1338) J165_04584 PF01427 D-ala-D-ala dipeptidase J165_04585 PF01510 N-acetylmuramoyl-L-alanine amidase J165_04587 PF13378 Enolase C-terminal domain-like J165_04587 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_04589 PF13520 Amino acid permease J165_04592 PF05360 yiaA/B two helix domain J165_04593 PF07995 Glucose / Sorbosone dehydrogenase J165_04594 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_04594 PF14310 Fibronectin type III-like domain J165_04594 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_04595 PF02152 Dihydroneopterin aldolase J165_04596 PF00814 Glycoprotease family J165_04597 PF01165 Ribosomal protein S21 J165_04598 PF09424 Yqey-like protein J165_04599 PF03631 Virulence factor BrkB J165_04600 PF10410 DnaB-helicase binding domain of primase J165_04600 PF01807 CHC2 zinc finger J165_04600 PF08275 DNA primase catalytic core, N-terminal domain J165_04600 PF08278 DNA primase DnaG DnaB-binding J165_04601 PF13593 SBF-like CPA transporter family (DUF4137) J165_04603 PF01040 UbiA prenyltransferase family J165_04608 PF00510 Cytochrome c oxidase subunit III J165_04609 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J165_04611 PF00115 Cytochrome C and Quinol oxidase polypeptide I J165_04614 PF00171 Aldehyde dehydrogenase family J165_04614 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J165_04614 PF14850 DNA-binding domain of Proline dehydrogenase J165_04614 PF01619 Proline dehydrogenase J165_04622 PF03594 Benzoate membrane transport protein J165_04623 PF00360 Phytochrome region J165_04623 PF13426 PAS domain J165_04623 PF08446 PAS fold J165_04623 PF01590 GAF domain J165_04624 PF01126 Heme oxygenase J165_04625 PF07690 Major Facilitator Superfamily J165_04626 PF01263 Aldose 1-epimerase J165_04628 PF02810 SEC-C motif J165_04629 PF01925 Sulfite exporter TauE/SafE J165_04634 PF01227 GTP cyclohydrolase I J165_04636 PF07869 Protein of unknown function (DUF1656) J165_04637 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J165_04637 PF00529 HlyD membrane-fusion protein of T1SS J165_04638 PF02321 Outer membrane efflux protein J165_04639 PF04632 Fusaric acid resistance protein family J165_04640 PF00083 Sugar (and other) transporter J165_04641 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J165_04642 PF13396 Phospholipase_D-nuclease N-terminal J165_04642 PF13091 PLD-like domain J165_04647 PF01850 PIN domain J165_04652 PF00849 RNA pseudouridylate synthase J165_04654 PF01527 Transposase J165_04655 PF13333 Integrase core domain J165_04655 PF00665 Integrase core domain J165_04655 PF13276 HTH-like domain J165_04658 PF02785 Biotin carboxylase C-terminal domain J165_04658 PF00289 Biotin carboxylase, N-terminal domain J165_04658 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_04659 PF01425 Amidase J165_04666 PF13538 UvrD-like helicase C-terminal domain J165_04669 PF12705 PD-(D/E)XK nuclease superfamily J165_04669 PF13361 UvrD-like helicase C-terminal domain J165_04669 PF00580 UvrD/REP helicase N-terminal domain J165_04670 PF17946 RecC C-terminal domain J165_04672 PF00005 ABC transporter J165_04673 PF02405 Permease MlaE J165_04674 PF02470 MlaD protein J165_04675 PF05494 MlaC protein J165_04677 PF04333 MlaA lipoprotein J165_04679 PF00255 Glutathione peroxidase J165_04681 PF02646 RmuC family J165_04682 PF00107 Zinc-binding dehydrogenase J165_04682 PF08240 Alcohol dehydrogenase GroES-like domain J165_04683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04683 PF03466 LysR substrate binding domain J165_04685 PF13417 Glutathione S-transferase, N-terminal domain J165_04685 PF00043 Glutathione S-transferase, C-terminal domain J165_04687 PF13520 Amino acid permease J165_04688 PF07971 Glycosyl hydrolase family 92 J165_04688 PF17678 Glycosyl hydrolase family 92 N-terminal domain J165_04689 PF10947 Protein of unknown function (DUF2628) J165_04690 PF00990 Diguanylate cyclase, GGDEF domain J165_04691 PF17853 GGDEF-like domain J165_04691 PF13556 PucR C-terminal helix-turn-helix domain J165_04691 PF05651 Putative sugar diacid recognition J165_04692 PF02595 Glycerate kinase family J165_04693 PF07690 Major Facilitator Superfamily J165_04696 PF10672 S-adenosylmethionine-dependent methyltransferase J165_04696 PF17785 PUA-like domain J165_04698 PF03741 Integral membrane protein TerC family J165_04699 PF01694 Rhomboid family J165_04700 PF03009 Glycerophosphoryl diester phosphodiesterase family J165_04702 PF01569 PAP2 superfamily J165_04703 PF12631 MnmE helical domain J165_04703 PF10396 GTP-binding protein TrmE N-terminus J165_04703 PF01926 50S ribosome-binding GTPase J165_04704 PF01522 Polysaccharide deacetylase J165_04705 PF14849 YidC periplasmic domain J165_04705 PF02096 60Kd inner membrane protein J165_04706 PF00825 Ribonuclease P J165_04707 PF00468 Ribosomal protein L34