J165_00001 PF10134 J165_00001 J165_00003 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_00004 PF13166 J165_00004 J165_00005 PF00239 Resolvase, N terminal domain J165_00005 PF02796 Helix-turn-helix domain of resolvase J165_00006 PF01402 Ribbon-helix-helix protein, copG family J165_00007 PF02384 N-6 DNA Methylase J165_00008 PF07669 Eco57I restriction-modification methylase J165_00010 PF01443 Viral (Superfamily 1) RNA helicase J165_00010 PF03389 MobA/MobL family J165_00010 PF13604 AAA domain J165_00012 PF02534 Type IV secretory system Conjugative DNA transfer J165_00015 PF01850 PIN domain J165_00016 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J165_00017 PF00239 Resolvase, N terminal domain J165_00018 PF13007 J165_00018 J165_00021 PF11740 J165_00021 J165_00024 PF01527 Transposase J165_00025 PF13683 J165_00025 J165_00026 PF00589 Phage integrase family J165_00027 PF01526 J165_00027 J165_00027 PF13700 J165_00027 J165_00029 PF00239 Resolvase, N terminal domain J165_00031 PF02452 PemK-like protein J165_00033 PF07929 Plasmid pRiA4b ORF-3-like protein J165_00035 PF03377 Xanthomonas avirulence protein, Avr/PthA J165_00036 PF00239 Resolvase, N terminal domain J165_00037 PF16762 J165_00037 J165_00038 PF13470 J165_00038 J165_00039 PF01526 J165_00039 J165_00039 PF13700 J165_00039 J165_00040 PF02810 SEC-C motif J165_00040 PF03695 Uncharacterised protein family (UPF0149) J165_00041 PF13276 J165_00041 J165_00042 PF03377 Xanthomonas avirulence protein, Avr/PthA J165_00043 PF00665 Integrase core domain J165_00044 PF13333 J165_00044 J165_00045 PF00239 Resolvase, N terminal domain J165_00046 PF04014 Antidote-toxin recognition MazE J165_00047 PF01850 PIN domain J165_00049 PF06414 Zeta toxin J165_00050 PF04796 J165_00050 J165_00051 PF13614 AAA domain J165_00052 PF02195 ParB-like nuclease domain J165_00052 PF08535 KorB domain J165_00053 PF16509 J165_00053 J165_00055 PF01527 Transposase J165_00056 PF00665 Integrase core domain J165_00059 PF01695 IstB-like ATP binding protein J165_00060 PF00665 Integrase core domain J165_00060 PF13936 Helix-turn-helix domain J165_00062 PF13365 Trypsin-like peptidase domain J165_00063 PF04796 J165_00063 J165_00065 PF05016 Plasmid stabilisation system protein J165_00066 PF03887 YfbU domain J165_00067 PF01385 J165_00067 J165_00071 PF10412 Type IV secretion-system coupling protein DNA-binding domain J165_00075 PF03432 J165_00075 J165_00079 PF02810 SEC-C motif J165_00079 PF03695 Uncharacterised protein family (UPF0149) J165_00080 PF01526 J165_00080 J165_00080 PF13700 J165_00080 J165_00081 PF13470 J165_00081 J165_00082 PF16762 J165_00082 J165_00083 PF00308 Bacterial dnaA protein J165_00083 PF08299 Bacterial dnaA protein helix-turn-helix J165_00083 PF11638 DnaA N-terminal domain J165_00084 PF00712 DNA polymerase III beta subunit, N-terminal domain J165_00084 PF02767 DNA polymerase III beta subunit, central domain J165_00084 PF02768 DNA polymerase III beta subunit, C-terminal domain J165_00085 PF02463 RecF/RecN/SMC N terminal domain J165_00087 PF00204 DNA gyrase B J165_00087 PF00986 DNA gyrase B subunit, carboxyl terminus J165_00087 PF01751 Toprim domain J165_00087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00088 PF02517 CAAX protease self-immunity J165_00089 PF01435 Peptidase family M48 J165_00090 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) J165_00091 PF03544 Gram-negative bacterial TonB protein C-terminal J165_00092 PF01618 J165_00092 J165_00093 PF02472 Biopolymer transport protein ExbD/TolR J165_00094 PF02472 Biopolymer transport protein ExbD/TolR J165_00095 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J165_00097 PF13091 PLD-like domain J165_00100 PF04055 Radical SAM superfamily J165_00101 PF13640 2OG-Fe(II) oxygenase superfamily J165_00102 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J165_00103 PF01694 Rhomboid family J165_00104 PF08850 J165_00104 J165_00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_00106 PF03572 Peptidase family S41 J165_00106 PF13180 PDZ domain J165_00107 PF01551 Peptidase family M23 J165_00109 PF02225 PA domain J165_00109 PF04389 Peptidase family M28 J165_00110 PF13670 J165_00110 J165_00111 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00112 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00117 PF06877 Regulator of ribonuclease activity B J165_00118 PF08212 Lipocalin-like domain J165_00119 PF04616 Glycosyl hydrolases family 43 J165_00120 PF13347 MFS/sugar transport protein J165_00121 PF00593 TonB dependent receptor J165_00121 PF07715 TonB-dependent Receptor Plug Domain J165_00122 PF07690 Major Facilitator Superfamily J165_00123 PF00331 Glycosyl hydrolase family 10 J165_00125 PF00331 Glycosyl hydrolase family 10 J165_00126 PF02614 Glucuronate isomerase J165_00127 PF00703 Glycosyl hydrolases family 2 J165_00127 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_00127 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_00127 PF16355 J165_00127 J165_00128 PF00331 Glycosyl hydrolase family 10 J165_00129 PF08450 SMP-30/Gluconolaconase/LRE-like region J165_00130 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J165_00131 PF09694 J165_00131 J165_00132 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_00132 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_00133 PF00596 Class II Aldolase and Adducin N-terminal domain J165_00134 PF00202 Aminotransferase class-III J165_00137 PF00171 Aldehyde dehydrogenase family J165_00138 PF00440 Bacterial regulatory proteins, tetR family J165_00139 PF01344 Kelch motif J165_00139 PF13964 Kelch motif J165_00142 PF01232 Mannitol dehydrogenase Rossmann domain J165_00142 PF08125 Mannitol dehydrogenase C-terminal domain J165_00143 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_00143 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_00143 PF07691 PA14 domain J165_00143 PF14310 Fibronectin type III-like domain J165_00144 PF04616 Glycosyl hydrolases family 43 J165_00145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_00145 PF13378 Enolase C-terminal domain-like J165_00146 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_00146 PF03629 Domain of unknown function (DUF303) J165_00147 PF03648 Glycosyl hydrolase family 67 N-terminus J165_00147 PF07477 Glycosyl hydrolase family 67 C-terminus J165_00147 PF07488 Glycosyl hydrolase family 67 middle domain J165_00148 PF00356 Bacterial regulatory proteins, lacI family J165_00148 PF13377 Periplasmic binding protein-like domain J165_00150 PF01171 PP-loop family J165_00151 PF04381 Putative exonuclease, RdgC J165_00152 PF01863 Protein of unknown function DUF45 J165_00153 PF00561 alpha/beta hydrolase fold J165_00154 PF00762 Ferrochelatase J165_00155 PF04366 J165_00155 J165_00156 PF02416 mttA/Hcf106 family J165_00157 PF02416 mttA/Hcf106 family J165_00158 PF00902 Sec-independent protein translocase protein (TatC) J165_00160 PF00117 Glutamine amidotransferase class-I J165_00162 PF00437 Type II/IV secretion system protein J165_00162 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_00163 PF02091 Glycyl-tRNA synthetase alpha subunit J165_00164 PF02092 J165_00164 J165_00164 PF05746 DALR anticodon binding domain J165_00165 PF13469 Sulfotransferase family J165_00165 PF14559 Tetratricopeptide repeat J165_00166 PF13469 Sulfotransferase family J165_00167 PF00593 TonB dependent receptor J165_00168 PF01609 Transposase DDE domain J165_00169 PF00593 TonB dependent receptor J165_00170 PF07715 TonB-dependent Receptor Plug Domain J165_00171 PF01103 Surface antigen J165_00171 PF07244 Surface antigen variable number repeat J165_00171 PF17243 J165_00171 J165_00172 PF04357 J165_00172 J165_00176 PF13360 PQQ-like domain J165_00178 PF13671 AAA domain J165_00179 PF13347 MFS/sugar transport protein J165_00180 PF06165 Glycosyltransferase family 36 J165_00180 PF17167 J165_00180 J165_00181 PF15979 J165_00181 J165_00182 PF00072 Response regulator receiver domain J165_00182 PF00512 His Kinase A (phospho-acceptor) domain J165_00182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00182 PF12860 J165_00182 J165_00183 PF02659 J165_00183 J165_00184 PF01614 Bacterial transcriptional regulator J165_00184 PF09339 IclR helix-turn-helix domain J165_00185 PF07690 Major Facilitator Superfamily J165_00186 PF05336 Domain of unknown function (DUF718) J165_00188 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_00188 PF13378 Enolase C-terminal domain-like J165_00189 PF01557 Fumarylacetoacetate (FAA) hydrolase family J165_00190 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00191 PF04909 Amidohydrolase J165_00192 PF00248 Aldo/keto reductase family J165_00193 PF04616 Glycosyl hydrolases family 43 J165_00195 PF00578 AhpC/TSA family J165_00197 PF14415 Domain of unknown function (DUF4424) J165_00198 PF00072 Response regulator receiver domain J165_00198 PF00196 Bacterial regulatory proteins, luxR family J165_00199 PF00501 AMP-binding enzyme J165_00199 PF13193 AMP-binding enzyme C-terminal domain J165_00199 PF16177 J165_00199 J165_00201 PF04341 J165_00201 J165_00202 PF00474 Sodium:solute symporter family J165_00203 PF03009 Glycerophosphoryl diester phosphodiesterase family J165_00204 PF13616 PPIC-type PPIASE domain J165_00206 PF00480 ROK family J165_00208 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00209 PF04828 Glutathione-dependent formaldehyde-activating enzyme J165_00210 PF04226 J165_00210 J165_00211 PF01648 4'-phosphopantetheinyl transferase superfamily J165_00212 PF09423 PhoD-like phosphatase J165_00212 PF16655 J165_00212 J165_00214 PF09423 PhoD-like phosphatase J165_00214 PF16655 J165_00214 J165_00215 PF02527 rRNA small subunit methyltransferase G J165_00216 PF05960 Bacterial protein of unknown function (DUF885) J165_00218 PF02321 Outer membrane efflux protein J165_00219 PF16576 J165_00219 J165_00220 PF00873 AcrB/AcrD/AcrF family J165_00221 PF00830 Ribosomal L28 family J165_00222 PF00471 Ribosomal protein L33 J165_00223 PF04909 Amidohydrolase J165_00224 PF04303 PrpF protein J165_00225 PF03737 Demethylmenaquinone methyltransferase J165_00226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00226 PF03466 LysR substrate binding domain J165_00227 PF13091 PLD-like domain J165_00227 PF13396 J165_00227 J165_00228 PF13454 FAD-NAD(P)-binding J165_00229 PF00580 UvrD/REP helicase N-terminal domain J165_00229 PF13361 UvrD-like helicase C-terminal domain J165_00230 PF00132 Bacterial transferase hexapeptide (six repeats) J165_00230 PF12464 Maltose acetyltransferase J165_00231 PF00582 Universal stress protein family J165_00232 PF12833 Helix-turn-helix domain J165_00233 PF05591 J165_00233 J165_00234 PF05943 J165_00234 J165_00235 PF05638 Protein of unknown function (DUF796) J165_00236 PF07024 ImpE protein J165_00237 PF04965 Gene 25-like lysozyme J165_00238 PF05947 J165_00238 J165_00239 PF06996 J165_00239 J165_00240 PF00004 ATPase family associated with various cellular activities (AAA) J165_00240 PF07724 AAA domain (Cdc48 subfamily) J165_00240 PF10431 C-terminal, D2-small domain, of ClpB protein J165_00246 PF01419 Jacalin-like lectin domain J165_00247 PF00328 Histidine phosphatase superfamily (branch 2) J165_00248 PF00593 TonB dependent receptor J165_00248 PF07715 TonB-dependent Receptor Plug Domain J165_00249 PF04773 FecR protein J165_00249 PF16220 J165_00249 J165_00249 PF16344 J165_00249 J165_00250 PF04542 Sigma-70 region 2 J165_00250 PF08281 Sigma-70, region 4 J165_00251 PF07638 ECF sigma factor J165_00252 PF00069 Protein kinase domain J165_00252 PF13374 Tetratricopeptide repeat J165_00252 PF13424 Tetratricopeptide repeat J165_00253 PF05488 PAAR motif J165_00254 PF00515 Tetratricopeptide repeat J165_00254 PF13489 Methyltransferase domain J165_00255 PF05954 Phage late control gene D protein (GPD) J165_00257 PF00498 FHA domain J165_00258 PF05936 J165_00258 J165_00259 PF00691 OmpA family J165_00259 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) J165_00260 PF06744 J165_00260 J165_00260 PF06761 J165_00260 J165_00260 PF14331 J165_00260 J165_00261 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) J165_00262 PF13672 Protein phosphatase 2C J165_00263 PF00069 Protein kinase domain J165_00263 PF03781 Sulfatase-modifying factor enzyme 1 J165_00265 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J165_00265 PF08479 POTRA domain, ShlB-type J165_00266 PF05860 haemagglutination activity domain J165_00267 PF06812 J165_00267 J165_00268 PF11191 Protein of unknown function (DUF2782) J165_00269 PF00476 DNA polymerase family A J165_00269 PF01367 5'-3' exonuclease, C-terminal SAM fold J165_00269 PF01612 3'-5' exonuclease J165_00269 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J165_00270 PF01218 Coproporphyrinogen III oxidase J165_00273 PF00326 Prolyl oligopeptidase family J165_00273 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_00274 PF00501 AMP-binding enzyme J165_00277 PF04820 Tryptophan halogenase J165_00278 PF00550 Phosphopantetheine attachment site J165_00280 PF01553 Acyltransferase J165_00281 PF07977 FabA-like domain J165_00282 PF03279 J165_00282 J165_00285 PF03176 MMPL family J165_00288 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00290 PF04820 Tryptophan halogenase J165_00290 PF13450 NAD(P)-binding Rossmann-like domain J165_00291 PF00535 Glycosyl transferase family 2 J165_00292 PF13723 J165_00292 J165_00293 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_00293 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_00294 PF05166 YcgL domain J165_00295 PF00023 Ankyrin repeat J165_00295 PF12796 Ankyrin repeats (3 copies) J165_00297 PF00723 Glycosyl hydrolases family 15 J165_00298 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J165_00298 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J165_00299 PF00999 Sodium/hydrogen exchanger family J165_00299 PF02254 TrkA-N domain J165_00300 PF00194 Eukaryotic-type carbonic anhydrase J165_00301 PF00571 CBS domain J165_00301 PF01769 Divalent cation transporter J165_00301 PF03448 MgtE intracellular N domain J165_00302 PF13302 Acetyltransferase (GNAT) domain J165_00302 PF13380 CoA binding domain J165_00302 PF13549 ATP-grasp domain J165_00302 PF13607 Succinyl-CoA ligase like flavodoxin domain J165_00303 PF04332 J165_00303 J165_00304 PF00317 Ribonucleotide reductase, all-alpha domain J165_00304 PF02867 Ribonucleotide reductase, barrel domain J165_00305 PF00268 Ribonucleotide reductase, small chain J165_00306 PF00258 Flavodoxin J165_00307 PF00085 Thioredoxin J165_00309 PF03061 Thioesterase superfamily J165_00311 PF02558 Ketopantoate reductase PanE/ApbA J165_00311 PF08546 Ketopantoate reductase PanE/ApbA C terminal J165_00312 PF12686 J165_00312 J165_00314 PF01061 J165_00314 J165_00315 PF00005 ABC transporter J165_00316 PF00175 Oxidoreductase NAD-binding domain J165_00316 PF00970 Oxidoreductase FAD-binding domain J165_00317 PF01965 DJ-1/PfpI family J165_00317 PF12833 Helix-turn-helix domain J165_00318 PF11287 J165_00318 J165_00319 PF00593 TonB dependent receptor J165_00319 PF07715 TonB-dependent Receptor Plug Domain J165_00320 PF03929 J165_00320 J165_00321 PF01545 Cation efflux family J165_00322 PF02583 Metal-sensitive transcriptional repressor J165_00323 PF01229 Glycosyl hydrolases family 39 J165_00325 PF01381 Helix-turn-helix J165_00326 PF00561 alpha/beta hydrolase fold J165_00326 PF08386 TAP-like protein J165_00327 PF00005 ABC transporter J165_00328 PF12679 J165_00328 J165_00329 PF03544 Gram-negative bacterial TonB protein C-terminal J165_00330 PF04820 Tryptophan halogenase J165_00331 PF13621 Cupin-like domain J165_00332 PF07277 J165_00332 J165_00333 PF00593 TonB dependent receptor J165_00333 PF07715 TonB-dependent Receptor Plug Domain J165_00334 PF00043 Glutathione S-transferase, C-terminal domain J165_00334 PF02798 Glutathione S-transferase, N-terminal domain J165_00335 PF00326 Prolyl oligopeptidase family J165_00335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_00336 PF05960 Bacterial protein of unknown function (DUF885) J165_00339 PF00490 Delta-aminolevulinic acid dehydratase J165_00340 PF01370 NAD dependent epimerase/dehydratase family J165_00341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00341 PF03466 LysR substrate binding domain J165_00342 PF01223 DNA/RNA non-specific endonuclease J165_00343 PF00175 Oxidoreductase NAD-binding domain J165_00343 PF00258 Flavodoxin J165_00343 PF03929 J165_00343 J165_00344 PF07676 WD40-like Beta Propeller Repeat J165_00345 PF01488 Shikimate / quinate 5-dehydrogenase J165_00345 PF08501 Shikimate dehydrogenase substrate binding domain J165_00348 PF13307 Helicase C-terminal domain J165_00349 PF00199 Catalase J165_00349 PF06628 Catalase-related immune-responsive J165_00350 PF12796 Ankyrin repeats (3 copies) J165_00352 PF01207 Dihydrouridine synthase (Dus) J165_00354 PF00072 Response regulator receiver domain J165_00354 PF00486 Transcriptional regulatory protein, C terminal J165_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00356 PF08811 J165_00356 J165_00357 PF07394 J165_00357 J165_00358 PF06167 Glucose-regulated metallo-peptidase M90 J165_00360 PF02237 Biotin protein ligase C terminal domain J165_00360 PF03099 Biotin/lipoate A/B protein ligase family J165_00360 PF08279 HTH domain J165_00361 PF03309 Type III pantothenate kinase J165_00362 PF05036 Sporulation related domain J165_00364 PF02223 Thymidylate kinase J165_00368 PF03259 Roadblock/LC7 domain J165_00369 PF00491 Arginase family J165_00370 PF08085 J165_00370 J165_00371 PF08085 J165_00371 J165_00372 PF05532 CsbD-like J165_00373 PF00579 tRNA synthetases class I (W and Y) J165_00374 PF00753 Metallo-beta-lactamase superfamily J165_00375 PF02225 PA domain J165_00375 PF04389 Peptidase family M28 J165_00377 PF00892 EamA-like transporter family J165_00378 PF00892 EamA-like transporter family J165_00379 PF12697 Alpha/beta hydrolase family J165_00380 PF02687 J165_00380 J165_00380 PF12704 MacB-like periplasmic core domain J165_00381 PF02687 J165_00381 J165_00381 PF12704 MacB-like periplasmic core domain J165_00382 PF00005 ABC transporter J165_00383 PF16576 J165_00383 J165_00384 PF07730 Histidine kinase J165_00385 PF00072 Response regulator receiver domain J165_00385 PF00196 Bacterial regulatory proteins, luxR family J165_00386 PF06283 Trehalose utilisation J165_00387 PF01292 Prokaryotic cytochrome b561 J165_00388 PF00199 Catalase J165_00389 PF04542 Sigma-70 region 2 J165_00389 PF08281 Sigma-70, region 4 J165_00391 PF00883 Cytosol aminopeptidase family, catalytic domain J165_00392 PF13419 Haloacid dehalogenase-like hydrolase J165_00393 PF01594 J165_00393 J165_00397 PF13180 PDZ domain J165_00397 PF13365 Trypsin-like peptidase domain J165_00399 PF11769 J165_00399 J165_00401 PF00512 His Kinase A (phospho-acceptor) domain J165_00401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00402 PF00072 Response regulator receiver domain J165_00402 PF00486 Transcriptional regulatory protein, C terminal J165_00403 PF01370 NAD dependent epimerase/dehydratase family J165_00403 PF08338 Domain of unknown function (DUF1731) J165_00404 PF13628 J165_00404 J165_00408 PF11379 J165_00408 J165_00409 PF00326 Prolyl oligopeptidase family J165_00411 PF01139 tRNA-splicing ligase RtcB J165_00412 PF01145 SPFH domain / Band 7 family J165_00417 PF00440 Bacterial regulatory proteins, tetR family J165_00418 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00418 PF00175 Oxidoreductase NAD-binding domain J165_00418 PF00970 Oxidoreductase FAD-binding domain J165_00419 PF00487 J165_00419 J165_00420 PF00563 EAL domain J165_00420 PF12792 J165_00420 J165_00422 PF08212 Lipocalin-like domain J165_00423 PF01078 Magnesium chelatase, subunit ChlI J165_00423 PF13335 J165_00423 J165_00423 PF13541 Subunit ChlI of Mg-chelatase J165_00424 PF04380 J165_00424 J165_00425 PF00543 Nitrogen regulatory protein P-II J165_00426 PF02838 Glycosyl hydrolase family 20, domain 2 J165_00426 PF07555 beta-N-acetylglucosaminidase J165_00429 PF09851 J165_00429 J165_00429 PF14470 Bacterial PH domain J165_00430 PF01564 Spermine/spermidine synthase J165_00430 PF17284 J165_00430 J165_00431 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J165_00432 PF00501 AMP-binding enzyme J165_00432 PF00550 Phosphopantetheine attachment site J165_00432 PF00668 Condensation domain J165_00432 PF00975 Thioesterase domain J165_00432 PF13193 AMP-binding enzyme C-terminal domain J165_00433 PF03033 Glycosyltransferase family 28 N-terminal domain J165_00434 PF01757 J165_00434 J165_00435 PF00106 short chain dehydrogenase J165_00437 PF05036 Sporulation related domain J165_00438 PF00750 tRNA synthetases class I (R) J165_00438 PF03485 Arginyl tRNA synthetase N terminal domain J165_00438 PF05746 DALR anticodon binding domain J165_00439 PF04002 RadC-like JAB domain J165_00440 PF02441 Flavoprotein J165_00440 PF04127 DNA / pantothenate metabolism flavoprotein J165_00441 PF00692 dUTPase J165_00442 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_00442 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_00442 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_00442 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_00444 PF07578 Lipid A Biosynthesis N-terminal domain J165_00445 PF00535 Glycosyl transferase family 2 J165_00446 PF01370 NAD dependent epimerase/dehydratase family J165_00447 PF11731 J165_00447 J165_00448 PF02195 ParB-like nuclease domain J165_00449 PF13614 AAA domain J165_00451 PF00156 Phosphoribosyl transferase domain J165_00452 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00453 PF07690 Major Facilitator Superfamily J165_00455 PF03702 Uncharacterised protein family (UPF0075) J165_00456 PF01551 Peptidase family M23 J165_00456 PF04225 Opacity-associated protein A LysM-like domain J165_00457 PF00579 tRNA synthetases class I (W and Y) J165_00464 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_00464 PF06827 Zinc finger found in FPG and IleRS J165_00464 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J165_00465 PF14315 J165_00465 J165_00466 PF04349 Periplasmic glucan biosynthesis protein, MdoG J165_00467 PF00512 His Kinase A (phospho-acceptor) domain J165_00467 PF01590 GAF domain J165_00468 PF00265 Thymidine kinase J165_00469 PF00580 UvrD/REP helicase N-terminal domain J165_00469 PF13361 UvrD-like helicase C-terminal domain J165_00470 PF13302 Acetyltransferase (GNAT) domain J165_00471 PF14094 J165_00471 J165_00472 PF04337 Protein of unknown function, DUF480 J165_00474 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J165_00475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J165_00476 PF04820 Tryptophan halogenase J165_00477 PF00593 TonB dependent receptor J165_00478 PF00593 TonB dependent receptor J165_00478 PF13620 Carboxypeptidase regulatory-like domain J165_00479 PF00356 Bacterial regulatory proteins, lacI family J165_00479 PF13377 Periplasmic binding protein-like domain J165_00481 PF01553 Acyltransferase J165_00482 PF00107 Zinc-binding dehydrogenase J165_00482 PF08240 Alcohol dehydrogenase GroES-like domain J165_00483 PF04325 Protein of unknown function (DUF465) J165_00486 PF00665 Integrase core domain J165_00486 PF13936 Helix-turn-helix domain J165_00487 PF01695 IstB-like ATP binding protein J165_00488 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00489 PF00107 Zinc-binding dehydrogenase J165_00489 PF08240 Alcohol dehydrogenase GroES-like domain J165_00490 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_00490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J165_00491 PF00310 Glutamine amidotransferases class-II J165_00491 PF01493 GXGXG motif J165_00491 PF01645 Conserved region in glutamate synthase J165_00491 PF04898 Glutamate synthase central domain J165_00492 PF11720 Peptidase inhibitor I78 family J165_00493 PF01028 Eukaryotic DNA topoisomerase I, catalytic core J165_00495 PF01804 Penicillin amidase J165_00496 PF05368 NmrA-like family J165_00497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00497 PF03466 LysR substrate binding domain J165_00498 PF00534 Glycosyl transferases group 1 J165_00498 PF13439 Glycosyltransferase Family 4 J165_00499 PF00534 Glycosyl transferases group 1 J165_00499 PF13439 Glycosyltransferase Family 4 J165_00500 PF02397 J165_00500 J165_00501 PF02350 UDP-N-acetylglucosamine 2-epimerase J165_00502 PF04932 J165_00502 J165_00503 PF03808 J165_00503 J165_00504 PF13439 Glycosyltransferase Family 4 J165_00504 PF13692 Glycosyl transferases group 1 J165_00508 PF13489 Methyltransferase domain J165_00509 PF00733 Asparagine synthase J165_00510 PF00733 Asparagine synthase J165_00510 PF13537 Glutamine amidotransferase domain J165_00512 PF05711 Macrocin-O-methyltransferase (TylF) J165_00513 PF01370 NAD dependent epimerase/dehydratase family J165_00515 PF01943 J165_00515 J165_00515 PF14667 Polysaccharide biosynthesis C-terminal domain J165_00516 PF00005 ABC transporter J165_00516 PF00664 ABC transporter transmembrane region J165_00517 PF13471 J165_00517 J165_00518 PF00733 Asparagine synthase J165_00518 PF13537 Glutamine amidotransferase domain J165_00520 PF13847 Methyltransferase domain J165_00521 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J165_00523 PF00685 Sulfotransferase domain J165_00524 PF13673 Acetyltransferase (GNAT) domain J165_00525 PF07484 Phage Tail Collar Domain J165_00526 PF07484 Phage Tail Collar Domain J165_00527 PF07484 Phage Tail Collar Domain J165_00528 PF14907 Uncharacterised nucleotidyltransferase J165_00529 PF03965 Penicillinase repressor J165_00530 PF05569 BlaR1 peptidase M56 J165_00533 PF03435 Saccharopine dehydrogenase J165_00535 PF08975 Domain of unknown function (DUF1868) J165_00536 PF00593 TonB dependent receptor J165_00536 PF07715 TonB-dependent Receptor Plug Domain J165_00537 PF00480 ROK family J165_00538 PF03009 Glycerophosphoryl diester phosphodiesterase family J165_00539 PF13482 RNase_H superfamily J165_00540 PF00270 DEAD/DEAH box helicase J165_00540 PF00271 Helicase conserved C-terminal domain J165_00540 PF09369 J165_00540 J165_00541 PF03006 J165_00541 J165_00542 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J165_00543 PF05016 Plasmid stabilisation system protein J165_00544 PF00106 short chain dehydrogenase J165_00545 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00546 PF03466 LysR substrate binding domain J165_00547 PF14305 J165_00547 J165_00550 PF02525 Flavodoxin-like fold J165_00551 PF10592 J165_00551 J165_00552 PF01527 Transposase J165_00553 PF00665 Integrase core domain J165_00553 PF13276 J165_00553 J165_00555 PF01609 Transposase DDE domain J165_00561 PF05532 CsbD-like J165_00562 PF08668 HDOD domain J165_00563 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J165_00565 PF01447 Thermolysin metallopeptidase, catalytic domain J165_00565 PF02868 Thermolysin metallopeptidase, alpha-helical domain J165_00566 PF13460 NADH(P)-binding J165_00567 PF00293 NUDIX domain J165_00568 PF01435 Peptidase family M48 J165_00569 PF10116 J165_00569 J165_00570 PF00085 Thioredoxin J165_00571 PF00083 Sugar (and other) transporter J165_00572 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J165_00573 PF12787 J165_00573 J165_00574 PF06080 J165_00574 J165_00577 PF07584 J165_00577 J165_00578 PF01882 J165_00578 J165_00579 PF07726 ATPase family associated with various cellular activities (AAA) J165_00580 PF13709 Domain of unknown function (DUF4159) J165_00581 PF01523 Putative modulator of DNA gyrase J165_00582 PF01523 Putative modulator of DNA gyrase J165_00583 PF01523 Putative modulator of DNA gyrase J165_00585 PF00316 Fructose-1-6-bisphosphatase J165_00586 PF00155 Aminotransferase class I and II J165_00587 PF00593 TonB dependent receptor J165_00587 PF07715 TonB-dependent Receptor Plug Domain J165_00589 PF07883 Cupin domain J165_00590 PF00171 Aldehyde dehydrogenase family J165_00591 PF05610 J165_00591 J165_00594 PF02735 Ku70/Ku80 beta-barrel domain J165_00595 PF01070 FMN-dependent dehydrogenase J165_00596 PF00144 Beta-lactamase J165_00597 PF07730 Histidine kinase J165_00598 PF00072 Response regulator receiver domain J165_00598 PF00196 Bacterial regulatory proteins, luxR family J165_00602 PF00486 Transcriptional regulatory protein, C terminal J165_00602 PF13191 AAA ATPase domain J165_00603 PF07055 Enoyl reductase FAD binding domain J165_00603 PF12241 Trans-2-enoyl-CoA reductase catalytic region J165_00603 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J165_00605 PF00294 pfkB family carbohydrate kinase J165_00606 PF00593 TonB dependent receptor J165_00606 PF07715 TonB-dependent Receptor Plug Domain J165_00607 PF13385 Concanavalin A-like lectin/glucanases superfamily J165_00610 PF13619 J165_00610 J165_00611 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J165_00612 PF01609 Transposase DDE domain J165_00613 PF01609 Transposase DDE domain J165_00617 PF01527 Transposase J165_00618 PF00665 Integrase core domain J165_00618 PF13276 J165_00618 J165_00619 PF00128 Alpha amylase, catalytic domain J165_00619 PF11896 Domain of unknown function (DUF3416) J165_00620 PF00128 Alpha amylase, catalytic domain J165_00620 PF16657 J165_00620 J165_00621 PF00128 Alpha amylase, catalytic domain J165_00621 PF02806 Alpha amylase, C-terminal all-beta domain J165_00621 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00622 PF12850 Calcineurin-like phosphoesterase superfamily domain J165_00623 PF00248 Aldo/keto reductase family J165_00624 PF00135 Carboxylesterase family J165_00625 PF07859 alpha/beta hydrolase fold J165_00627 PF03480 Bacterial extracellular solute-binding protein, family 7 J165_00628 PF04290 J165_00628 J165_00629 PF06808 J165_00629 J165_00630 PF04616 Glycosyl hydrolases family 43 J165_00631 PF00356 Bacterial regulatory proteins, lacI family J165_00631 PF13377 Periplasmic binding protein-like domain J165_00632 PF04962 KduI/IolB family J165_00633 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00634 PF02502 Ribose/Galactose Isomerase J165_00634 PF12408 Ribose-5-phosphate isomerase J165_00635 PF07883 Cupin domain J165_00635 PF13472 GDSL-like Lipase/Acylhydrolase family J165_00637 PF05299 M61 glycyl aminopeptidase J165_00638 PF14300 Domain of unknown function (DUF4375) J165_00639 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J165_00640 PF01037 AsnC family J165_00640 PF13404 AsnC-type helix-turn-helix domain J165_00641 PF00593 TonB dependent receptor J165_00641 PF07715 TonB-dependent Receptor Plug Domain J165_00642 PF01734 Patatin-like phospholipase J165_00643 PF01987 Mitochondrial biogenesis AIM24 J165_00644 PF00005 ABC transporter J165_00645 PF00487 J165_00645 J165_00646 PF13202 EF hand J165_00647 PF00005 ABC transporter J165_00648 PF00528 Binding-protein-dependent transport system inner membrane component J165_00648 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J165_00649 PF00266 Aminotransferase class-V J165_00650 PF03781 Sulfatase-modifying factor enzyme 1 J165_00650 PF12867 DinB superfamily J165_00651 PF10017 J165_00651 J165_00652 PF13657 HipA N-terminal domain J165_00653 PF13560 Helix-turn-helix domain J165_00654 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J165_00656 PF03547 J165_00656 J165_00657 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_00658 PF00300 Histidine phosphatase superfamily (branch 1) J165_00659 PF04264 YceI-like domain J165_00660 PF13091 PLD-like domain J165_00661 PF03061 Thioesterase superfamily J165_00662 PF01553 Acyltransferase J165_00663 PF12146 Putative lysophospholipase J165_00665 PF13432 Tetratricopeptide repeat J165_00666 PF01161 Phosphatidylethanolamine-binding protein J165_00667 PF08240 Alcohol dehydrogenase GroES-like domain J165_00668 PF03724 META domain J165_00668 PF14302 J165_00668 J165_00669 PF02673 J165_00669 J165_00670 PF00120 Glutamine synthetase, catalytic domain J165_00670 PF03951 Glutamine synthetase, beta-Grasp domain J165_00671 PF00543 Nitrogen regulatory protein P-II J165_00672 PF00909 Ammonium Transporter Family J165_00673 PF00512 His Kinase A (phospho-acceptor) domain J165_00673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00674 PF00072 Response regulator receiver domain J165_00674 PF00158 Sigma-54 interaction domain J165_00674 PF02954 Bacterial regulatory protein, Fis family J165_00675 PF00080 Copper/zinc superoxide dismutase (SODC) J165_00676 PF00080 Copper/zinc superoxide dismutase (SODC) J165_00679 PF00108 Thiolase, N-terminal domain J165_00679 PF02803 Thiolase, C-terminal domain J165_00680 PF07219 J165_00680 J165_00681 PF04375 J165_00681 J165_00682 PF02602 Uroporphyrinogen-III synthase HemD J165_00683 PF01755 J165_00683 J165_00684 PF09500 Putative thioesterase (yiiD_Cterm) J165_00686 PF00581 Rhodanese-like domain J165_00687 PF02556 Preprotein translocase subunit SecB J165_00688 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J165_00688 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J165_00689 PF13505 Outer membrane protein beta-barrel domain J165_00690 PF00205 Thiamine pyrophosphate enzyme, central domain J165_00690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J165_00690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J165_00691 PF00512 His Kinase A (phospho-acceptor) domain J165_00691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00692 PF00072 Response regulator receiver domain J165_00692 PF00158 Sigma-54 interaction domain J165_00692 PF02954 Bacterial regulatory protein, Fis family J165_00695 PF07690 Major Facilitator Superfamily J165_00696 PF00588 SpoU rRNA Methylase family J165_00698 PF13698 J165_00698 J165_00699 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_00699 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_00700 PF02661 Fic/DOC family J165_00700 PF13784 Fic/DOC family N-terminal J165_00702 PF00561 alpha/beta hydrolase fold J165_00703 PF03692 J165_00703 J165_00704 PF00501 AMP-binding enzyme J165_00706 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J165_00707 PF07043 J165_00707 J165_00708 PF01820 D-ala D-ala ligase N-terminus J165_00709 PF02036 SCP-2 sterol transfer family J165_00710 PF03109 J165_00710 J165_00711 PF07883 Cupin domain J165_00712 PF00849 RNA pseudouridylate synthase J165_00713 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) J165_00714 PF00472 RF-1 domain J165_00715 PF01553 Acyltransferase J165_00716 PF01112 Asparaginase J165_00717 PF01432 Peptidase family M3 J165_00718 PF12706 Beta-lactamase superfamily domain J165_00719 PF00440 Bacterial regulatory proteins, tetR family J165_00719 PF14246 AefR-like transcriptional repressor, C-terminal region J165_00720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_00721 PF12833 Helix-turn-helix domain J165_00722 PF00999 Sodium/hydrogen exchanger family J165_00723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00723 PF03466 LysR substrate binding domain J165_00724 PF01274 Malate synthase J165_00725 PF00463 Isocitrate lyase family J165_00726 PF00027 Cyclic nucleotide-binding domain J165_00726 PF00990 GGDEF domain J165_00727 PF13174 Tetratricopeptide repeat J165_00727 PF14559 Tetratricopeptide repeat J165_00729 PF00881 Nitroreductase family J165_00730 PF00326 Prolyl oligopeptidase family J165_00731 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J165_00731 PF00364 Biotin-requiring enzyme J165_00731 PF02785 Biotin carboxylase C-terminal domain J165_00731 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_00732 PF01039 Carboxyl transferase domain J165_00733 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_00733 PF02770 Acyl-CoA dehydrogenase, middle domain J165_00733 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_00734 PF00440 Bacterial regulatory proteins, tetR family J165_00736 PF08808 J165_00736 J165_00737 PF11804 J165_00737 J165_00738 PF03929 J165_00738 J165_00739 PF12365 J165_00739 J165_00741 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J165_00742 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00743 PF03203 J165_00743 J165_00744 PF02492 CobW/HypB/UreG, nucleotide-binding domain J165_00744 PF07683 Cobalamin synthesis protein cobW C-terminal domain J165_00747 PF12146 Putative lysophospholipase J165_00748 PF03969 AFG1-like ATPase J165_00749 PF01047 MarR family J165_00750 PF02566 OsmC-like protein J165_00751 PF12697 Alpha/beta hydrolase family J165_00752 PF11101 J165_00752 J165_00755 PF00107 Zinc-binding dehydrogenase J165_00755 PF16884 J165_00755 J165_00756 PF00248 Aldo/keto reductase family J165_00758 PF00849 RNA pseudouridylate synthase J165_00759 PF00593 TonB dependent receptor J165_00760 PF07715 TonB-dependent Receptor Plug Domain J165_00760 PF13620 Carboxypeptidase regulatory-like domain J165_00762 PF00271 Helicase conserved C-terminal domain J165_00762 PF04408 Helicase associated domain (HA2) J165_00762 PF08482 J165_00762 J165_00763 PF07308 J165_00763 J165_00764 PF00576 HIUase/Transthyretin family J165_00765 PF13738 Pyridine nucleotide-disulphide oxidoreductase J165_00766 PF09349 OHCU decarboxylase J165_00767 PF11533 Protein of unknown function (DUF3225) J165_00768 PF01522 Polysaccharide deacetylase J165_00769 PF00266 Aminotransferase class-V J165_00770 PF01546 Peptidase family M20/M25/M40 J165_00770 PF07687 Peptidase dimerisation domain J165_00771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00771 PF03466 LysR substrate binding domain J165_00772 PF07690 Major Facilitator Superfamily J165_00774 PF01019 Gamma-glutamyltranspeptidase J165_00775 PF01425 Amidase J165_00776 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_00777 PF00962 Adenosine/AMP deaminase J165_00778 PF00860 Permease family J165_00779 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00779 PF00970 Oxidoreductase FAD-binding domain J165_00780 PF00355 Rieske [2Fe-2S] domain J165_00781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00781 PF03466 LysR substrate binding domain J165_00782 PF01026 TatD related DNase J165_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00785 PF03466 LysR substrate binding domain J165_00786 PF07690 Major Facilitator Superfamily J165_00787 PF13411 MerR HTH family regulatory protein J165_00788 PF12697 Alpha/beta hydrolase family J165_00789 PF02146 Sir2 family J165_00790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_00791 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_00791 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_00793 PF00551 Formyl transferase J165_00793 PF01842 ACT domain J165_00794 PF00072 Response regulator receiver domain J165_00794 PF00486 Transcriptional regulatory protein, C terminal J165_00795 PF00512 His Kinase A (phospho-acceptor) domain J165_00795 PF00672 HAMP domain J165_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00796 PF16576 J165_00796 J165_00797 PF00873 AcrB/AcrD/AcrF family J165_00798 PF02321 Outer membrane efflux protein J165_00800 PF02219 Methylenetetrahydrofolate reductase J165_00801 PF02677 J165_00801 J165_00802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00802 PF03466 LysR substrate binding domain J165_00803 PF03358 NADPH-dependent FMN reductase J165_00804 PF08908 J165_00804 J165_00805 PF01717 Cobalamin-independent synthase, Catalytic domain J165_00806 PF03812 J165_00806 J165_00807 PF07396 Phosphate-selective porin O and P J165_00808 PF05368 NmrA-like family J165_00809 PF01638 HxlR-like helix-turn-helix J165_00813 PF00665 Integrase core domain J165_00813 PF13276 J165_00813 J165_00814 PF01527 Transposase J165_00815 PF00589 Phage integrase family J165_00816 PF00920 Dehydratase family J165_00817 PF00150 Cellulase (glycosyl hydrolase family 5) J165_00819 PF00132 Bacterial transferase hexapeptide (six repeats) J165_00820 PF07690 Major Facilitator Superfamily J165_00821 PF11871 J165_00821 J165_00821 PF13487 HD domain J165_00822 PF12802 MarR family J165_00823 PF13557 J165_00823 J165_00824 PF00106 short chain dehydrogenase J165_00824 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00825 PF00171 Aldehyde dehydrogenase family J165_00826 PF02311 AraC-like ligand binding domain J165_00826 PF12833 Helix-turn-helix domain J165_00827 PF01494 FAD binding domain J165_00829 PF12680 SnoaL-like domain J165_00830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_00830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_00831 PF00230 Major intrinsic protein J165_00832 PF01266 FAD dependent oxidoreductase J165_00832 PF16901 J165_00832 J165_00833 PF00455 J165_00833 J165_00833 PF08220 DeoR-like helix-turn-helix domain J165_00834 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_00834 PF00175 Oxidoreductase NAD-binding domain J165_00834 PF00970 Oxidoreductase FAD-binding domain J165_00835 PF00355 Rieske [2Fe-2S] domain J165_00836 PF01144 Coenzyme A transferase J165_00837 PF01144 Coenzyme A transferase J165_00838 PF00108 Thiolase, N-terminal domain J165_00838 PF02803 Thiolase, C-terminal domain J165_00839 PF00775 Dioxygenase J165_00839 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J165_00840 PF00775 Dioxygenase J165_00841 PF00206 Lyase J165_00841 PF10397 Adenylosuccinate lyase C-terminus J165_00842 PF00561 alpha/beta hydrolase fold J165_00843 PF02627 Carboxymuconolactone decarboxylase family J165_00844 PF12146 Putative lysophospholipase J165_00845 PF01614 Bacterial transcriptional regulator J165_00845 PF09339 IclR helix-turn-helix domain J165_00846 PF01163 RIO1 family J165_00847 PF07859 alpha/beta hydrolase fold J165_00848 PF10677 J165_00848 J165_00849 PF01134 Glucose inhibited division protein A J165_00849 PF13932 GidA associated domain 3 J165_00851 PF00291 Pyridoxal-phosphate dependent enzyme J165_00852 PF02698 DUF218 domain J165_00853 PF12680 SnoaL-like domain J165_00854 PF05118 Aspartyl/Asparaginyl beta-hydroxylase J165_00855 PF08241 Methyltransferase domain J165_00856 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00857 PF12697 Alpha/beta hydrolase family J165_00859 PF00155 Aminotransferase class I and II J165_00860 PF04055 Radical SAM superfamily J165_00860 PF06968 Biotin and Thiamin Synthesis associated domain J165_00861 PF00156 Phosphoribosyl transferase domain J165_00862 PF01040 UbiA prenyltransferase family J165_00866 PF05819 J165_00866 J165_00869 PF05932 Tir chaperone protein (CesT) family J165_00874 PF01313 J165_00874 J165_00875 PF00813 J165_00875 J165_00876 PF01052 Surface presentation of antigens (SPOA) J165_00877 PF09483 J165_00877 J165_00878 PF00771 FHIPEP family J165_00879 PF01312 FlhB HrpN YscU SpaS Family J165_00880 PF09613 J165_00880 J165_00881 PF09487 J165_00881 J165_00882 PF01514 Secretory protein of YscJ/FliF family J165_00883 PF09502 J165_00883 J165_00884 PF02108 J165_00884 J165_00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_00886 PF09486 J165_00886 J165_00887 PF01311 J165_00887 J165_00888 PF00263 J165_00888 J165_00888 PF03958 Bacterial type II/III secretion system short domain J165_00890 PF01464 Transglycosylase SLT domain J165_00892 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J165_00893 PF00924 Mechanosensitive ion channel J165_00893 PF12607 J165_00893 J165_00894 PF00884 Sulfatase J165_00896 PF03109 J165_00896 J165_00897 PF05661 J165_00897 J165_00898 PF00990 GGDEF domain J165_00899 PF00534 Glycosyl transferases group 1 J165_00899 PF08323 Starch synthase catalytic domain J165_00900 PF00128 Alpha amylase, catalytic domain J165_00900 PF02806 Alpha amylase, C-terminal all-beta domain J165_00900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00901 PF00128 Alpha amylase, catalytic domain J165_00901 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00901 PF11941 Domain of unknown function (DUF3459) J165_00902 PF02446 4-alpha-glucanotransferase J165_00903 PF00128 Alpha amylase, catalytic domain J165_00904 PF11154 J165_00904 J165_00905 PF00128 Alpha amylase, catalytic domain J165_00905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_00906 PF13460 NADH(P)-binding J165_00907 PF13561 Enoyl-(Acyl carrier protein) reductase J165_00908 PF00890 FAD binding domain J165_00908 PF13454 FAD-NAD(P)-binding J165_00909 PF06903 J165_00909 J165_00910 PF02321 Outer membrane efflux protein J165_00911 PF00440 Bacterial regulatory proteins, tetR family J165_00912 PF16576 J165_00912 J165_00913 PF00873 AcrB/AcrD/AcrF family J165_00914 PF00106 short chain dehydrogenase J165_00916 PF00270 DEAD/DEAH box helicase J165_00916 PF00271 Helicase conserved C-terminal domain J165_00918 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_00918 PF00364 Biotin-requiring enzyme J165_00918 PF02817 e3 binding domain J165_00919 PF07653 Variant SH3 domain J165_00920 PF02779 Transketolase, pyrimidine binding domain J165_00920 PF02780 Transketolase, C-terminal domain J165_00921 PF00676 Dehydrogenase E1 component J165_00922 PF00932 Lamin Tail Domain J165_00922 PF03160 Calx-beta domain J165_00922 PF03372 Endonuclease/Exonuclease/phosphatase family J165_00923 PF03301 Tryptophan 2,3-dioxygenase J165_00924 PF00854 POT family J165_00925 PF13899 Thioredoxin-like J165_00926 PF12802 MarR family J165_00927 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_00927 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal J165_00928 PF04209 homogentisate 1,2-dioxygenase J165_00931 PF03334 J165_00931 J165_00932 PF04066 J165_00932 J165_00933 PF01899 J165_00933 J165_00934 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_00935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J165_00936 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_00936 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_00936 PF04039 J165_00936 J165_00936 PF13244 J165_00936 J165_00937 PF01370 NAD dependent epimerase/dehydratase family J165_00938 PF06127 J165_00938 J165_00939 PF01447 Thermolysin metallopeptidase, catalytic domain J165_00939 PF02868 Thermolysin metallopeptidase, alpha-helical domain J165_00939 PF07504 Fungalysin/Thermolysin Propeptide Motif J165_00941 PF00182 Chitinase class I J165_00941 PF01471 Putative peptidoglycan binding domain J165_00941 PF01551 Peptidase family M23 J165_00945 PF01259 SAICAR synthetase J165_00946 PF00226 DnaJ domain J165_00947 PF13505 Outer membrane protein beta-barrel domain J165_00948 PF00834 Ribulose-phosphate 3 epimerase family J165_00949 PF00583 Acetyltransferase (GNAT) family J165_00950 PF00781 Diacylglycerol kinase catalytic domain J165_00951 PF00425 chorismate binding enzyme J165_00951 PF04715 Anthranilate synthase component I, N terminal region J165_00952 PF01212 Beta-eliminating lyase J165_00953 PF00117 Glutamine amidotransferase class-I J165_00954 PF01613 Flavin reductase like domain J165_00955 PF00591 Glycosyl transferase family, a/b domain J165_00955 PF02885 Glycosyl transferase family, helical bundle domain J165_00956 PF00218 Indole-3-glycerol phosphate synthase J165_00957 PF12710 haloacid dehalogenase-like hydrolase J165_00958 PF00027 Cyclic nucleotide-binding domain J165_00958 PF00325 Bacterial regulatory proteins, crp family J165_00959 PF02675 S-adenosylmethionine decarboxylase J165_00960 PF00893 Small Multidrug Resistance protein J165_00961 PF03232 J165_00961 J165_00962 PF00572 Ribosomal protein L13 J165_00963 PF00380 Ribosomal protein S9/S16 J165_00966 PF00293 NUDIX domain J165_00967 PF00210 Ferritin-like domain J165_00968 PF00072 Response regulator receiver domain J165_00968 PF00512 His Kinase A (phospho-acceptor) domain J165_00968 PF01627 Hpt domain J165_00968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_00969 PF00072 Response regulator receiver domain J165_00969 PF00563 EAL domain J165_00969 PF00990 GGDEF domain J165_00970 PF13548 J165_00970 J165_00972 PF04519 J165_00972 J165_00973 PF01521 Iron-sulphur cluster biosynthesis J165_00974 PF03583 Secretory lipase J165_00975 PF00293 NUDIX domain J165_00975 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J165_00975 PF09297 NADH pyrophosphatase zinc ribbon domain J165_00976 PF03186 J165_00976 J165_00977 PF10825 J165_00977 J165_00978 PF04505 J165_00978 J165_00979 PF01553 Acyltransferase J165_00979 PF07690 Major Facilitator Superfamily J165_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_00980 PF03466 LysR substrate binding domain J165_00981 PF07690 Major Facilitator Superfamily J165_00982 PF12805 J165_00982 J165_00982 PF13515 J165_00982 J165_00983 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J165_00983 PF02843 Phosphoribosylglycinamide synthetase, C domain J165_00983 PF02844 Phosphoribosylglycinamide synthetase, N domain J165_00985 PF01808 AICARFT/IMPCHase bienzyme J165_00985 PF02142 MGS-like domain J165_00986 PF01066 CDP-alcohol phosphatidyltransferase J165_00987 PF12146 Putative lysophospholipase J165_00987 PF12147 J165_00987 J165_00988 PF00782 Dual specificity phosphatase, catalytic domain J165_00988 PF14378 J165_00988 J165_00991 PF01066 CDP-alcohol phosphatidyltransferase J165_00992 PF01553 Acyltransferase J165_00993 PF01148 Cytidylyltransferase family J165_00994 PF02954 Bacterial regulatory protein, Fis family J165_00995 PF11906 J165_00995 J165_00997 PF01381 Helix-turn-helix J165_00999 PF06325 Ribosomal protein L11 methyltransferase (PrmA) J165_01003 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J165_01003 PF02785 Biotin carboxylase C-terminal domain J165_01003 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_01004 PF05635 23S rRNA-intervening sequence protein J165_01005 PF00364 Biotin-requiring enzyme J165_01006 PF01220 Dehydroquinase class II J165_01007 PF02683 J165_01007 J165_01007 PF11412 Disulphide bond corrector protein DsbC J165_01007 PF13899 Thioredoxin-like J165_01008 PF03091 CutA1 divalent ion tolerance protein J165_01009 PF12625 J165_01009 J165_01009 PF12833 Helix-turn-helix domain J165_01011 PF01852 START domain J165_01013 PF00106 short chain dehydrogenase J165_01014 PF00932 Lamin Tail Domain J165_01014 PF04231 Endonuclease I J165_01014 PF13205 Bacterial Ig-like domain J165_01015 PF00166 Chaperonin 10 Kd subunit J165_01016 PF00118 TCP-1/cpn60 chaperonin family J165_01018 PF00593 TonB dependent receptor J165_01018 PF07715 TonB-dependent Receptor Plug Domain J165_01019 PF00793 DAHP synthetase I family J165_01022 PF08450 SMP-30/Gluconolaconase/LRE-like region J165_01024 PF03710 Glutamate-ammonia ligase adenylyltransferase J165_01024 PF08335 GlnD PII-uridylyltransferase J165_01025 PF02592 J165_01025 J165_01026 PF00082 Subtilase family J165_01026 PF09286 Pro-kumamolisin, activation domain J165_01027 PF06258 J165_01027 J165_01028 PF00881 Nitroreductase family J165_01029 PF04264 YceI-like domain J165_01030 PF00328 Histidine phosphatase superfamily (branch 2) J165_01031 PF04954 Siderophore-interacting protein J165_01031 PF08021 Siderophore-interacting FAD-binding domain J165_01032 PF03551 Transcriptional regulator PadR-like family J165_01033 PF16957 J165_01033 J165_01034 PF06857 J165_01034 J165_01035 PF01039 Carboxyl transferase domain J165_01036 PF06833 Malonate decarboxylase gamma subunit (MdcE) J165_01037 PF10620 J165_01037 J165_01038 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J165_01040 PF00698 Acyl transferase domain J165_01041 PF03600 Citrate transporter J165_01041 PF07158 J165_01041 J165_01042 PF00392 Bacterial regulatory proteins, gntR family J165_01042 PF07729 FCD domain J165_01043 PF13419 Haloacid dehalogenase-like hydrolase J165_01044 PF01740 STAS domain J165_01045 PF13581 Histidine kinase-like ATPase domain J165_01046 PF00672 HAMP domain J165_01046 PF02743 Cache domain J165_01046 PF07228 Stage II sporulation protein E (SpoIIE) J165_01048 PF01764 Lipase (class 3) J165_01049 PF07745 Glycosyl hydrolase family 53 J165_01050 PF00456 Transketolase, thiamine diphosphate binding domain J165_01051 PF00665 Integrase core domain J165_01051 PF13276 J165_01051 J165_01052 PF01527 Transposase J165_01053 PF00106 short chain dehydrogenase J165_01054 PF12833 Helix-turn-helix domain J165_01054 PF12852 Cupin J165_01056 PF00106 short chain dehydrogenase J165_01056 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01057 PF01145 SPFH domain / Band 7 family J165_01058 PF13409 Glutathione S-transferase, N-terminal domain J165_01058 PF13410 Glutathione S-transferase, C-terminal domain J165_01059 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_01060 PF13548 J165_01060 J165_01062 PF14412 J165_01062 J165_01063 PF07791 J165_01063 J165_01064 PF01527 Transposase J165_01065 PF00665 Integrase core domain J165_01065 PF13276 J165_01065 J165_01066 PF07791 J165_01066 J165_01067 PF01433 Peptidase family M1 J165_01067 PF11838 ERAP1-like C-terminal domain J165_01068 PF13302 Acetyltransferase (GNAT) domain J165_01069 PF00588 SpoU rRNA Methylase family J165_01069 PF08032 RNA 2'-O ribose methyltransferase substrate binding J165_01070 PF00135 Carboxylesterase family J165_01071 PF03080 J165_01071 J165_01072 PF10566 Glycoside hydrolase 97 J165_01072 PF14508 Glycosyl-hydrolase 97 N-terminal J165_01072 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J165_01073 PF00703 Glycosyl hydrolases family 2 J165_01073 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_01073 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_01073 PF13385 Concanavalin A-like lectin/glucanases superfamily J165_01074 PF00593 TonB dependent receptor J165_01074 PF07715 TonB-dependent Receptor Plug Domain J165_01075 PF00356 Bacterial regulatory proteins, lacI family J165_01075 PF13377 Periplasmic binding protein-like domain J165_01076 PF04389 Peptidase family M28 J165_01077 PF01741 Large-conductance mechanosensitive channel, MscL J165_01078 PF01557 Fumarylacetoacetate (FAA) hydrolase family J165_01080 PF00355 Rieske [2Fe-2S] domain J165_01081 PF02080 TrkA-C domain J165_01081 PF03600 Citrate transporter J165_01082 PF02390 Putative methyltransferase J165_01083 PF05690 Thiazole biosynthesis protein ThiG J165_01084 PF02597 ThiS family J165_01085 PF00657 GDSL-like Lipase/Acylhydrolase J165_01085 PF03797 Autotransporter beta-domain J165_01087 PF00589 Phage integrase family J165_01089 PF05593 J165_01089 J165_01090 PF05593 J165_01090 J165_01090 PF15649 J165_01090 J165_01095 PF13560 Helix-turn-helix domain J165_01098 PF13280 J165_01098 J165_01100 PF00899 ThiF family J165_01100 PF14457 J165_01100 J165_01100 PF14464 Prokaryotic homologs of the JAB domain J165_01102 PF00589 Phage integrase family J165_01104 PF04002 RadC-like JAB domain J165_01106 PF07791 J165_01106 J165_01107 PF14412 J165_01107 J165_01110 PF01555 DNA methylase J165_01111 PF04851 Type III restriction enzyme, res subunit J165_01112 PF14082 J165_01112 J165_01115 PF00665 Integrase core domain J165_01115 PF13936 Helix-turn-helix domain J165_01116 PF01695 IstB-like ATP binding protein J165_01119 PF13391 J165_01119 J165_01121 PF03389 MobA/MobL family J165_01123 PF00565 Staphylococcal nuclease homologue J165_01125 PF00816 H-NS histone family J165_01126 PF00128 Alpha amylase, catalytic domain J165_01126 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J165_01127 PF08443 RimK-like ATP-grasp domain J165_01128 PF08443 RimK-like ATP-grasp domain J165_01130 PF00072 Response regulator receiver domain J165_01130 PF00486 Transcriptional regulatory protein, C terminal J165_01131 PF00512 His Kinase A (phospho-acceptor) domain J165_01131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01132 PF00665 Integrase core domain J165_01132 PF13276 J165_01132 J165_01133 PF01527 Transposase J165_01134 PF08845 J165_01134 J165_01135 PF05593 J165_01135 J165_01136 PF01121 Dephospho-CoA kinase J165_01137 PF01478 Type IV leader peptidase family J165_01137 PF06750 J165_01137 J165_01138 PF00482 Type II secretion system (T2SS), protein F J165_01139 PF00114 Pilin (bacterial filament) J165_01139 PF07963 Prokaryotic N-terminal methylation motif J165_01140 PF00114 Pilin (bacterial filament) J165_01140 PF07963 Prokaryotic N-terminal methylation motif J165_01141 PF00437 Type II/IV secretion system protein J165_01141 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_01144 PF00072 Response regulator receiver domain J165_01144 PF00158 Sigma-54 interaction domain J165_01144 PF02954 Bacterial regulatory protein, Fis family J165_01145 PF00512 His Kinase A (phospho-acceptor) domain J165_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01146 PF00549 CoA-ligase J165_01146 PF08442 ATP-grasp domain J165_01147 PF00549 CoA-ligase J165_01147 PF02629 CoA binding domain J165_01149 PF12760 Transposase zinc-ribbon domain J165_01149 PF12762 J165_01149 J165_01152 PF01129 NAD:arginine ADP-ribosyltransferase J165_01154 PF00665 Integrase core domain J165_01154 PF13936 Helix-turn-helix domain J165_01156 PF00959 Phage lysozyme J165_01161 PF04550 J165_01161 J165_01165 PF01527 Transposase J165_01166 PF00665 Integrase core domain J165_01166 PF13276 J165_01166 J165_01167 PF14700 DNA-directed RNA polymerase N-terminal J165_01182 PF13155 Toprim-like J165_01184 PF04606 J165_01184 J165_01187 PF05954 Phage late control gene D protein (GPD) J165_01188 PF06995 J165_01188 J165_01189 PF10145 J165_01189 J165_01190 PF06528 J165_01190 J165_01191 PF10109 J165_01191 J165_01192 PF04985 J165_01192 J165_01193 PF04984 Phage tail sheath protein J165_01193 PF17482 J165_01193 J165_01194 PF04965 Gene 25-like lysozyme J165_01195 PF04717 Phage-related baseplate assembly protein J165_01199 PF09684 J165_01199 J165_01200 PF04865 J165_01200 J165_01201 PF00072 Response regulator receiver domain J165_01202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01202 PF08448 PAS fold J165_01203 PF05069 J165_01203 J165_01204 PF06891 J165_01204 J165_01207 PF05449 J165_01207 J165_01208 PF16931 J165_01208 J165_01209 PF05489 Phage Tail Protein X J165_01210 PF05926 J165_01210 J165_01211 PF05944 J165_01211 J165_01212 PF05125 J165_01212 J165_01213 PF05929 J165_01213 J165_01214 PF03237 Terminase-like family J165_01214 PF06056 Putative ATPase subunit of terminase (gpP-like) J165_01214 PF17289 J165_01214 J165_01215 PF04860 Phage portal protein J165_01216 PF01555 DNA methylase J165_01217 PF01695 IstB-like ATP binding protein J165_01218 PF06114 Domain of unknown function (DUF955) J165_01219 PF00817 impB/mucB/samB family J165_01219 PF11799 impB/mucB/samB family C-terminal domain J165_01219 PF13438 J165_01219 J165_01220 PF00717 Peptidase S24-like J165_01221 PF01339 CheB methylesterase J165_01222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01223 PF08448 PAS fold J165_01225 PF05697 Bacterial trigger factor protein (TF) J165_01225 PF05698 Bacterial trigger factor protein (TF) C-terminus J165_01226 PF00574 Clp protease J165_01227 PF06689 ClpX C4-type zinc finger J165_01227 PF07724 AAA domain (Cdc48 subfamily) J165_01227 PF10431 C-terminal, D2-small domain, of ClpB protein J165_01228 PF00004 ATPase family associated with various cellular activities (AAA) J165_01228 PF02190 ATP-dependent protease La (LON) domain J165_01228 PF05362 Lon protease (S16) C-terminal proteolytic domain J165_01229 PF00216 Bacterial DNA-binding protein J165_01233 PF13145 PPIC-type PPIASE domain J165_01233 PF13616 PPIC-type PPIASE domain J165_01233 PF13623 J165_01233 J165_01235 PF01464 Transglycosylase SLT domain J165_01235 PF01476 LysM domain J165_01236 PF00753 Metallo-beta-lactamase superfamily J165_01236 PF16123 J165_01236 J165_01238 PF00075 RNase H J165_01239 PF00929 Exonuclease J165_01240 PF13672 Protein phosphatase 2C J165_01243 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J165_01244 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family J165_01245 PF12706 Beta-lactamase superfamily domain J165_01246 PF04055 Radical SAM superfamily J165_01246 PF06463 Molybdenum Cofactor Synthesis C J165_01246 PF13353 4Fe-4S single cluster domain J165_01247 PF01967 MoaC family J165_01248 PF02597 ThiS family J165_01249 PF02391 MoaE protein J165_01251 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01252 PF01527 Transposase J165_01253 PF00665 Integrase core domain J165_01253 PF13276 J165_01253 J165_01254 PF03389 MobA/MobL family J165_01257 PF00589 Phage integrase family J165_01259 PF12169 DNA polymerase III subunits gamma and tau domain III J165_01259 PF12170 DNA polymerase III tau subunit V interacting with alpha J165_01259 PF13177 DNA polymerase III, delta subunit J165_01260 PF02575 YbaB/EbfC DNA-binding family J165_01261 PF02132 RecR protein J165_01261 PF13662 Toprim domain J165_01262 PF01230 HIT domain J165_01263 PF03843 J165_01263 J165_01264 PF01841 Transglutaminase-like superfamily J165_01264 PF11992 J165_01264 J165_01265 PF01882 J165_01265 J165_01266 PF07726 ATPase family associated with various cellular activities (AAA) J165_01267 PF13231 J165_01267 J165_01271 PF02545 Maf-like protein J165_01272 PF02620 J165_01272 J165_01273 PF01783 Ribosomal L32p protein family J165_01274 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_01274 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_01275 PF08670 J165_01275 J165_01276 PF00698 Acyl transferase domain J165_01277 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01278 PF00550 Phosphopantetheine attachment site J165_01279 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_01279 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_01280 PF00425 chorismate binding enzyme J165_01281 PF02618 YceG-like family J165_01282 PF13177 DNA polymerase III, delta subunit J165_01283 PF07238 PilZ domain J165_01286 PF00158 Sigma-54 interaction domain J165_01286 PF02954 Bacterial regulatory protein, Fis family J165_01286 PF06506 Propionate catabolism activator J165_01287 PF13714 Phosphoenolpyruvate phosphomutase J165_01288 PF00285 Citrate synthase J165_01289 PF00330 Aconitase family (aconitate hydratase) J165_01289 PF00694 Aconitase C-terminal domain J165_01290 PF03693 Uncharacterised protein family (UPF0156) J165_01291 PF05016 Plasmid stabilisation system protein J165_01292 PF04303 PrpF protein J165_01293 PF00593 TonB dependent receptor J165_01293 PF07715 TonB-dependent Receptor Plug Domain J165_01294 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_01295 PF00207 Alpha-2-macroglobulin family J165_01295 PF01835 MG2 domain J165_01295 PF07703 Alpha-2-macroglobulin family N-terminal region J165_01295 PF11974 Alpha-2-macroglobulin MG1 domain J165_01296 PF00593 TonB dependent receptor J165_01296 PF07715 TonB-dependent Receptor Plug Domain J165_01297 PF03009 Glycerophosphoryl diester phosphodiesterase family J165_01297 PF16387 J165_01297 J165_01298 PF00905 Penicillin binding protein transpeptidase domain J165_01298 PF00912 Transglycosylase J165_01298 PF06832 J165_01298 J165_01299 PF00210 Ferritin-like domain J165_01300 PF08534 Redoxin J165_01301 PF00011 Hsp20/alpha crystallin family J165_01302 PF00226 DnaJ domain J165_01302 PF01556 DnaJ C terminal domain J165_01304 PF00072 Response regulator receiver domain J165_01306 PF01145 SPFH domain / Band 7 family J165_01307 PF01145 SPFH domain / Band 7 family J165_01308 PF01797 Transposase IS200 like J165_01310 PF00709 Adenylosuccinate synthetase J165_01311 PF01433 Peptidase family M1 J165_01311 PF11838 ERAP1-like C-terminal domain J165_01313 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01314 PF00440 Bacterial regulatory proteins, tetR family J165_01323 PF00069 Protein kinase domain J165_01325 PF00440 Bacterial regulatory proteins, tetR family J165_01327 PF00300 Histidine phosphatase superfamily (branch 1) J165_01328 PF01256 Carbohydrate kinase J165_01329 PF02055 O-Glycosyl hydrolase family 30 J165_01329 PF17189 J165_01329 J165_01330 PF00723 Glycosyl hydrolases family 15 J165_01331 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01332 PF07971 Glycosyl hydrolase family 92 J165_01334 PF00106 short chain dehydrogenase J165_01335 PF13532 2OG-Fe(II) oxygenase superfamily J165_01336 PF00027 Cyclic nucleotide-binding domain J165_01336 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01337 PF02148 Zn-finger in ubiquitin-hydrolases and other protein J165_01338 PF00563 EAL domain J165_01339 PF13328 HD domain J165_01340 PF00005 ABC transporter J165_01341 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_01341 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J165_01342 PF00941 FAD binding domain in molybdopterin dehydrogenase J165_01342 PF03450 CO dehydrogenase flavoprotein C-terminal domain J165_01343 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_01343 PF01799 [2Fe-2S] binding domain J165_01344 PF05559 J165_01344 J165_01346 PF07883 Cupin domain J165_01348 PF02661 Fic/DOC family J165_01349 PF04014 Antidote-toxin recognition MazE J165_01350 PF00717 Peptidase S24-like J165_01350 PF01726 LexA DNA binding domain J165_01352 PF00817 impB/mucB/samB family J165_01353 PF02811 PHP domain J165_01353 PF07733 Bacterial DNA polymerase III alpha subunit J165_01353 PF14579 Helix-hairpin-helix motif J165_01354 PF00326 Prolyl oligopeptidase family J165_01355 PF08668 HDOD domain J165_01356 PF03169 J165_01356 J165_01357 PF13557 J165_01357 J165_01359 PF00326 Prolyl oligopeptidase family J165_01359 PF07676 WD40-like Beta Propeller Repeat J165_01362 PF08448 PAS fold J165_01362 PF12833 Helix-turn-helix domain J165_01367 PF00270 DEAD/DEAH box helicase J165_01367 PF00271 Helicase conserved C-terminal domain J165_01367 PF02559 CarD-like/TRCF domain J165_01367 PF03461 TRCF domain J165_01368 PF13302 Acetyltransferase (GNAT) domain J165_01369 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ J165_01370 PF00072 Response regulator receiver domain J165_01370 PF00486 Transcriptional regulatory protein, C terminal J165_01371 PF00512 His Kinase A (phospho-acceptor) domain J165_01371 PF00672 HAMP domain J165_01371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01372 PF00112 Papain family cysteine protease J165_01373 PF06123 J165_01373 J165_01376 PF00795 Carbon-nitrogen hydrolase J165_01377 PF12275 J165_01377 J165_01378 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_01379 PF01475 Ferric uptake regulator family J165_01380 PF00440 Bacterial regulatory proteins, tetR family J165_01380 PF14246 AefR-like transcriptional repressor, C-terminal region J165_01381 PF00529 HlyD family secretion protein J165_01381 PF16576 J165_01381 J165_01382 PF00873 AcrB/AcrD/AcrF family J165_01383 PF02321 Outer membrane efflux protein J165_01384 PF00440 Bacterial regulatory proteins, tetR family J165_01385 PF07883 Cupin domain J165_01386 PF06719 J165_01386 J165_01386 PF12833 Helix-turn-helix domain J165_01388 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01388 PF03466 LysR substrate binding domain J165_01389 PF07690 Major Facilitator Superfamily J165_01390 PF00248 Aldo/keto reductase family J165_01392 PF00082 Subtilase family J165_01392 PF01483 Proprotein convertase P-domain J165_01394 PF00082 Subtilase family J165_01394 PF01483 Proprotein convertase P-domain J165_01395 PF00593 TonB dependent receptor J165_01395 PF07715 TonB-dependent Receptor Plug Domain J165_01396 PF00593 TonB dependent receptor J165_01396 PF07715 TonB-dependent Receptor Plug Domain J165_01397 PF03203 J165_01397 J165_01398 PF17067 J165_01398 J165_01399 PF00107 Zinc-binding dehydrogenase J165_01399 PF08240 Alcohol dehydrogenase GroES-like domain J165_01400 PF00654 Voltage gated chloride channel J165_01401 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase J165_01402 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J165_01402 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J165_01403 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_01403 PF02805 Metal binding domain of Ada J165_01403 PF06029 AlkA N-terminal domain J165_01403 PF12833 Helix-turn-helix domain J165_01406 PF13211 J165_01406 J165_01407 PF01124 MAPEG family J165_01409 PF13275 S4 domain J165_01411 PF04542 Sigma-70 region 2 J165_01411 PF08281 Sigma-70, region 4 J165_01412 PF00270 DEAD/DEAH box helicase J165_01412 PF00271 Helicase conserved C-terminal domain J165_01412 PF03880 DbpA RNA binding domain J165_01413 PF00563 EAL domain J165_01413 PF00990 GGDEF domain J165_01413 PF08447 PAS fold J165_01414 PF00849 RNA pseudouridylate synthase J165_01414 PF01479 S4 domain J165_01415 PF00990 GGDEF domain J165_01415 PF01590 GAF domain J165_01416 PF00892 EamA-like transporter family J165_01417 PF01904 Protein of unknown function DUF72 J165_01418 PF03737 Demethylmenaquinone methyltransferase J165_01419 PF00144 Beta-lactamase J165_01419 PF11954 J165_01419 J165_01420 PF00999 Sodium/hydrogen exchanger family J165_01421 PF00512 His Kinase A (phospho-acceptor) domain J165_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01422 PF00072 Response regulator receiver domain J165_01422 PF00486 Transcriptional regulatory protein, C terminal J165_01423 PF02321 Outer membrane efflux protein J165_01424 PF06629 J165_01424 J165_01425 PF16576 J165_01425 J165_01426 PF00873 AcrB/AcrD/AcrF family J165_01428 PF07929 Plasmid pRiA4b ORF-3-like protein J165_01429 PF00005 ABC transporter J165_01429 PF00664 ABC transporter transmembrane region J165_01430 PF05960 Bacterial protein of unknown function (DUF885) J165_01432 PF14257 J165_01432 J165_01434 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01434 PF03466 LysR substrate binding domain J165_01435 PF00892 EamA-like transporter family J165_01436 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J165_01437 PF04070 J165_01437 J165_01441 PF14539 Domain of unknown function (DUF4442) J165_01442 PF00085 Thioredoxin J165_01442 PF14559 Tetratricopeptide repeat J165_01442 PF14561 Tetratricopeptide repeat J165_01443 PF06197 J165_01443 J165_01444 PF00133 tRNA synthetases class I (I, L, M and V) J165_01444 PF08264 Anticodon-binding domain of tRNA J165_01444 PF13603 Leucyl-tRNA synthetase, Domain 2 J165_01445 PF04390 Lipopolysaccharide-assembly J165_01446 PF06144 DNA polymerase III, delta subunit J165_01447 PF01467 Cytidylyltransferase J165_01448 PF02410 Oligomerisation domain J165_01449 PF05787 Bacterial protein of unknown function (DUF839) J165_01449 PF10518 TAT (twin-arginine translocation) pathway signal sequence J165_01450 PF02590 Predicted SPOUT methyltransferase J165_01451 PF03544 Gram-negative bacterial TonB protein C-terminal J165_01452 PF00593 TonB dependent receptor J165_01452 PF07715 TonB-dependent Receptor Plug Domain J165_01452 PF13620 Carboxypeptidase regulatory-like domain J165_01453 PF04402 Protein of unknown function (DUF541) J165_01454 PF02545 Maf-like protein J165_01455 PF10150 Ribonuclease E/G family J165_01456 PF13116 J165_01456 J165_01456 PF13502 J165_01456 J165_01458 PF01523 Putative modulator of DNA gyrase J165_01459 PF04751 Protein of unknown function (DUF615) J165_01460 PF01523 Putative modulator of DNA gyrase J165_01461 PF09685 J165_01461 J165_01462 PF14521 Lysine-specific metallo-endopeptidase J165_01463 PF00348 Polyprenyl synthetase J165_01464 PF02609 Exonuclease VII small subunit J165_01465 PF01171 PP-loop family J165_01465 PF09179 TilS substrate binding domain J165_01465 PF11734 TilS substrate C-terminal domain J165_01466 PF00245 Alkaline phosphatase J165_01467 PF00375 Sodium:dicarboxylate symporter family J165_01468 PF13649 Methyltransferase domain J165_01469 PF03061 Thioesterase superfamily J165_01470 PF00877 NlpC/P60 family J165_01471 PF00877 NlpC/P60 family J165_01472 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_01473 PF04235 J165_01473 J165_01474 PF01266 FAD dependent oxidoreductase J165_01475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01476 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J165_01477 PF01694 Rhomboid family J165_01478 PF01431 Peptidase family M13 J165_01478 PF05649 Peptidase family M13 J165_01479 PF01431 Peptidase family M13 J165_01479 PF05649 Peptidase family M13 J165_01480 PF01431 Peptidase family M13 J165_01480 PF05649 Peptidase family M13 J165_01481 PF01593 Flavin containing amine oxidoreductase J165_01482 PF00593 TonB dependent receptor J165_01482 PF07715 TonB-dependent Receptor Plug Domain J165_01483 PF00593 TonB dependent receptor J165_01483 PF07715 TonB-dependent Receptor Plug Domain J165_01484 PF10609 ParA/MinD ATPase like J165_01485 PF00692 dUTPase J165_01488 PF01230 HIT domain J165_01489 PF01738 Dienelactone hydrolase family J165_01490 PF00919 Uncharacterized protein family UPF0004 J165_01490 PF04055 Radical SAM superfamily J165_01491 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_01491 PF03449 Transcription elongation factor, N-terminal J165_01492 PF01694 Rhomboid family J165_01494 PF00293 NUDIX domain J165_01495 PF05872 J165_01495 J165_01496 PF01464 Transglycosylase SLT domain J165_01496 PF01476 LysM domain J165_01497 PF02666 J165_01497 J165_01498 PF02630 SCO1/SenC J165_01499 PF05175 Methyltransferase small domain J165_01500 PF01264 Chorismate synthase J165_01501 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_01501 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_01502 PF01118 Semialdehyde dehydrogenase, NAD binding domain J165_01502 PF02774 Semialdehyde dehydrogenase, dimerisation domain J165_01504 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_01506 PF01416 tRNA pseudouridine synthase J165_01507 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J165_01508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01508 PF03466 LysR substrate binding domain J165_01509 PF00291 Pyridoxal-phosphate dependent enzyme J165_01511 PF00290 Tryptophan synthase alpha chain J165_01512 PF01039 Carboxyl transferase domain J165_01513 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_01513 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_01513 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_01513 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_01514 PF03171 2OG-Fe(II) oxygenase superfamily J165_01514 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J165_01516 PF00563 EAL domain J165_01516 PF00672 HAMP domain J165_01516 PF00990 GGDEF domain J165_01516 PF14827 Sensory domain of two-component sensor kinase J165_01517 PF11231 J165_01517 J165_01518 PF01152 Bacterial-like globin J165_01519 PF00106 short chain dehydrogenase J165_01520 PF00121 Triosephosphate isomerase J165_01521 PF03840 Preprotein translocase SecG subunit J165_01523 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J165_01524 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J165_01525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J165_01526 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J165_01527 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin J165_01528 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J165_01528 PF10531 SLBB domain J165_01528 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J165_01529 PF00384 Molybdopterin oxidoreductase J165_01529 PF01568 Molydopterin dinucleotide binding domain J165_01529 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J165_01529 PF13510 2Fe-2S iron-sulfur cluster binding domain J165_01530 PF00146 NADH dehydrogenase J165_01531 PF12838 4Fe-4S dicluster domain J165_01532 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J165_01533 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J165_01534 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_01534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_01535 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_01536 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_01538 PF02576 Uncharacterised BCR, YhbC family COG0779 J165_01538 PF17384 J165_01538 J165_01539 PF00575 S1 RNA binding domain J165_01539 PF08529 NusA N-terminal domain J165_01539 PF13184 NusA-like KH domain J165_01539 PF14520 Helix-hairpin-helix domain J165_01540 PF00009 Elongation factor Tu GTP binding domain J165_01540 PF04760 Translation initiation factor IF-2, N-terminal region J165_01540 PF08364 J165_01540 J165_01540 PF11987 Translation-initiation factor 2 J165_01541 PF02033 Ribosome-binding factor A J165_01542 PF01509 TruB family pseudouridylate synthase (N terminal domain) J165_01542 PF09157 Pseudouridine synthase II TruB, C-terminal J165_01542 PF16198 J165_01542 J165_01543 PF00312 Ribosomal protein S15 J165_01544 PF00013 KH domain J165_01544 PF00575 S1 RNA binding domain J165_01544 PF01138 3' exoribonuclease family, domain 1 J165_01544 PF03725 3' exoribonuclease family, domain 2 J165_01544 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J165_01545 PF10030 J165_01545 J165_01546 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J165_01546 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J165_01547 PF03966 Trm112p-like protein J165_01548 PF00731 AIR carboxylase J165_01549 PF02222 ATP-grasp domain J165_01550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J165_01550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J165_01551 PF00462 Glutaredoxin J165_01552 PF00106 short chain dehydrogenase J165_01553 PF01914 J165_01553 J165_01554 PF07715 TonB-dependent Receptor Plug Domain J165_01554 PF13620 Carboxypeptidase regulatory-like domain J165_01555 PF03641 Possible lysine decarboxylase J165_01555 PF11892 Domain of unknown function (DUF3412) J165_01555 PF14793 Domain of unknown function (DUF4478) J165_01556 PF06580 J165_01556 J165_01557 PF07963 Prokaryotic N-terminal methylation motif J165_01557 PF12019 Type II transport protein GspH J165_01558 PF07963 Prokaryotic N-terminal methylation motif J165_01559 PF07963 Prokaryotic N-terminal methylation motif J165_01559 PF16074 J165_01559 J165_01560 PF05567 Neisseria PilC beta-propeller domain J165_01561 PF07963 Prokaryotic N-terminal methylation motif J165_01561 PF16732 J165_01561 J165_01562 PF01527 Transposase J165_01563 PF00665 Integrase core domain J165_01563 PF13276 J165_01563 J165_01564 PF04717 Phage-related baseplate assembly protein J165_01565 PF11459 J165_01565 J165_01565 PF17194 J165_01565 J165_01566 PF08843 Nucleotidyl transferase of unknown function (DUF1814) J165_01568 PF05930 Prophage CP4-57 regulatory protein (AlpA) J165_01569 PF04002 RadC-like JAB domain J165_01570 PF05284 J165_01570 J165_01571 PF13560 Helix-turn-helix domain J165_01572 PF01527 Transposase J165_01573 PF00665 Integrase core domain J165_01573 PF13276 J165_01573 J165_01574 PF10070 J165_01574 J165_01575 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J165_01575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J165_01576 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01576 PF03466 LysR substrate binding domain J165_01578 PF17201 J165_01578 J165_01579 PF00072 Response regulator receiver domain J165_01579 PF00196 Bacterial regulatory proteins, luxR family J165_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01580 PF07495 Y_Y_Y domain J165_01580 PF07730 Histidine kinase J165_01581 PF12833 Helix-turn-helix domain J165_01582 PF00857 Isochorismatase family J165_01583 PF07681 J165_01583 J165_01584 PF07969 Amidohydrolase family J165_01585 PF05977 Transmembrane secretion effector J165_01588 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_01588 PF10414 Sirohaem synthase dimerisation region J165_01588 PF13241 Putative NAD(P)-binding J165_01588 PF14824 Sirohaem biosynthesis protein central J165_01590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_01590 PF03861 ANTAR domain J165_01591 PF10685 J165_01591 J165_01592 PF05974 Domain of unknown function (DUF892) J165_01593 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J165_01594 PF07081 Protein of unknown function (DUF1349) J165_01595 PF00563 EAL domain J165_01596 PF12951 J165_01596 J165_01596 PF13018 J165_01596 J165_01597 PF00072 Response regulator receiver domain J165_01597 PF00196 Bacterial regulatory proteins, luxR family J165_01598 PF00512 His Kinase A (phospho-acceptor) domain J165_01598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01599 PF02321 Outer membrane efflux protein J165_01600 PF00873 AcrB/AcrD/AcrF family J165_01601 PF16576 J165_01601 J165_01602 PF00082 Subtilase family J165_01602 PF03797 Autotransporter beta-domain J165_01602 PF12951 J165_01602 J165_01604 PF06580 J165_01604 J165_01605 PF00072 Response regulator receiver domain J165_01605 PF04397 LytTr DNA-binding domain J165_01606 PF00144 Beta-lactamase J165_01608 PF07995 Glucose / Sorbosone dehydrogenase J165_01611 PF09335 J165_01611 J165_01613 PF01527 Transposase J165_01614 PF00665 Integrase core domain J165_01614 PF13276 J165_01614 J165_01617 PF12375 J165_01617 J165_01620 PF05707 Zonular occludens toxin (Zot) J165_01624 PF17091 J165_01624 J165_01625 PF02303 Helix-destabilising protein J165_01626 PF02486 J165_01626 J165_01629 PF12472 J165_01629 J165_01630 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01631 PF00732 GMC oxidoreductase J165_01631 PF05199 GMC oxidoreductase J165_01632 PF12697 Alpha/beta hydrolase family J165_01632 PF13618 J165_01632 J165_01633 PF00535 Glycosyl transferase family 2 J165_01634 PF05401 Nodulation protein S (NodS) J165_01635 PF02585 GlcNAc-PI de-N-acetylase J165_01636 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_01637 PF01596 O-methyltransferase J165_01638 PF04940 Sensors of blue-light using FAD J165_01641 PF01106 NifU-like domain J165_01642 PF01329 Pterin 4 alpha carbinolamine dehydratase J165_01643 PF03544 Gram-negative bacterial TonB protein C-terminal J165_01644 PF02535 J165_01644 J165_01645 PF11737 J165_01645 J165_01646 PF00849 RNA pseudouridylate synthase J165_01646 PF01479 S4 domain J165_01647 PF00575 S1 RNA binding domain J165_01647 PF10150 Ribonuclease E/G family J165_01648 PF00072 Response regulator receiver domain J165_01648 PF00196 Bacterial regulatory proteins, luxR family J165_01649 PF00581 Rhodanese-like domain J165_01651 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_01652 PF03486 HI0933-like protein J165_01653 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_01653 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_01653 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_01655 PF00589 Phage integrase family J165_01656 PF01527 Transposase J165_01657 PF00665 Integrase core domain J165_01657 PF13276 J165_01657 J165_01658 PF01527 Transposase J165_01659 PF00665 Integrase core domain J165_01660 PF00501 AMP-binding enzyme J165_01660 PF00550 Phosphopantetheine attachment site J165_01660 PF00668 Condensation domain J165_01660 PF00975 Thioesterase domain J165_01660 PF13193 AMP-binding enzyme C-terminal domain J165_01661 PF00501 AMP-binding enzyme J165_01661 PF00550 Phosphopantetheine attachment site J165_01661 PF00668 Condensation domain J165_01661 PF13193 AMP-binding enzyme C-terminal domain J165_01664 PF05598 J165_01664 J165_01669 PF01609 Transposase DDE domain J165_01670 PF00665 Integrase core domain J165_01670 PF13936 Helix-turn-helix domain J165_01671 PF01695 IstB-like ATP binding protein J165_01672 PF01609 Transposase DDE domain J165_01673 PF12101 J165_01673 J165_01674 PF13091 PLD-like domain J165_01675 PF09369 J165_01675 J165_01676 PF00271 Helicase conserved C-terminal domain J165_01678 PF00271 Helicase conserved C-terminal domain J165_01679 PF01695 IstB-like ATP binding protein J165_01680 PF00665 Integrase core domain J165_01680 PF13936 Helix-turn-helix domain J165_01681 PF00176 SNF2 family N-terminal domain J165_01682 PF00145 C-5 cytosine-specific DNA methylase J165_01684 PF01695 IstB-like ATP binding protein J165_01685 PF00665 Integrase core domain J165_01685 PF13936 Helix-turn-helix domain J165_01686 PF05930 Prophage CP4-57 regulatory protein (AlpA) J165_01687 PF13614 AAA domain J165_01689 PF02195 ParB-like nuclease domain J165_01690 PF11198 J165_01690 J165_01692 PF08900 J165_01692 J165_01693 PF11358 J165_01693 J165_01694 PF00436 Single-strand binding protein family J165_01695 PF01131 DNA topoisomerase J165_01695 PF01396 J165_01695 J165_01695 PF01751 Toprim domain J165_01696 PF00145 C-5 cytosine-specific DNA methylase J165_01706 PF11284 J165_01706 J165_01708 PF13936 Helix-turn-helix domain J165_01710 PF12101 J165_01710 J165_01711 PF11679 J165_01711 J165_01717 PF00271 Helicase conserved C-terminal domain J165_01721 PF01464 Transglycosylase SLT domain J165_01722 PF11072 J165_01722 J165_01723 PF12696 TraM recognition site of TraD and TraG J165_01724 PF14348 J165_01724 J165_01725 PF09686 J165_01725 J165_01726 PF11660 J165_01726 J165_01727 PF11190 J165_01727 J165_01728 PF11990 J165_01728 J165_01729 PF11444 J165_01729 J165_01730 PF11920 J165_01730 J165_01733 PF11130 J165_01733 J165_01734 PF13462 Thioredoxin J165_01736 PF04002 RadC-like JAB domain J165_01738 PF07511 J165_01738 J165_01739 PF06834 J165_01739 J165_01742 PF07916 J165_01742 J165_01743 PF12553 J165_01743 J165_01744 PF08808 J165_01744 J165_01746 PF07514 Putative helicase J165_01747 PF13340 J165_01747 J165_01751 PF04610 J165_01751 J165_01753 PF05231 J165_01753 J165_01756 PF13340 J165_01756 J165_01758 PF01609 Transposase DDE domain J165_01758 PF05598 J165_01758 J165_01759 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01759 PF03466 LysR substrate binding domain J165_01760 PF13560 Helix-turn-helix domain J165_01761 PF03466 LysR substrate binding domain J165_01763 PF01695 IstB-like ATP binding protein J165_01764 PF00665 Integrase core domain J165_01765 PF13356 Domain of unknown function (DUF4102) J165_01767 PF01066 CDP-alcohol phosphatidyltransferase J165_01768 PF01541 GIY-YIG catalytic domain J165_01768 PF02151 UvrB/uvrC motif J165_01768 PF08459 UvrC Helix-hairpin-helix N-terminal J165_01769 PF01436 NHL repeat J165_01770 PF01451 Low molecular weight phosphotyrosine protein phosphatase J165_01771 PF02348 Cytidylyltransferase J165_01772 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J165_01773 PF00005 ABC transporter J165_01773 PF00664 ABC transporter transmembrane region J165_01774 PF02472 Biopolymer transport protein ExbD/TolR J165_01775 PF01618 J165_01775 J165_01776 PF00753 Metallo-beta-lactamase superfamily J165_01776 PF03772 J165_01776 J165_01776 PF13567 J165_01776 J165_01777 PF01370 NAD dependent epimerase/dehydratase family J165_01778 PF00005 ABC transporter J165_01779 PF02687 J165_01779 J165_01779 PF12704 MacB-like periplasmic core domain J165_01781 PF03937 Flavinator of succinate dehydrogenase J165_01782 PF13085 2Fe-2S iron-sulfur cluster binding domain J165_01782 PF13534 4Fe-4S dicluster domain J165_01784 PF00890 FAD binding domain J165_01784 PF02910 Fumarate reductase flavoprotein C-term J165_01785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J165_01786 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J165_01787 PF07896 Protein of unknown function (DUF1674) J165_01788 PF01571 Aminomethyltransferase folate-binding domain J165_01788 PF08669 Glycine cleavage T-protein C-terminal barrel domain J165_01789 PF00005 ABC transporter J165_01789 PF08402 TOBE domain J165_01790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J165_01790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J165_01791 PF02685 Glucokinase J165_01792 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J165_01793 PF00920 Dehydratase family J165_01794 PF01081 KDPG and KHG aldolase J165_01795 PF00873 AcrB/AcrD/AcrF family J165_01796 PF00873 AcrB/AcrD/AcrF family J165_01797 PF00529 HlyD family secretion protein J165_01797 PF16576 J165_01797 J165_01798 PF00034 Cytochrome c J165_01799 PF00034 Cytochrome c J165_01807 PF00072 Response regulator receiver domain J165_01807 PF00512 His Kinase A (phospho-acceptor) domain J165_01807 PF01590 GAF domain J165_01807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01807 PF08447 PAS fold J165_01807 PF08448 PAS fold J165_01807 PF13185 GAF domain J165_01808 PF00575 S1 RNA binding domain J165_01808 PF09371 Tex-like protein N-terminal domain J165_01808 PF12836 Helix-hairpin-helix motif J165_01808 PF16921 J165_01808 J165_01810 PF01266 FAD dependent oxidoreductase J165_01812 PF04024 J165_01812 J165_01813 PF00561 alpha/beta hydrolase fold J165_01814 PF09712 J165_01814 J165_01815 PF01066 CDP-alcohol phosphatidyltransferase J165_01816 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01817 PF00293 NUDIX domain J165_01818 PF06853 J165_01818 J165_01819 PF03618 J165_01819 J165_01820 PF00391 PEP-utilising enzyme, mobile domain J165_01820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J165_01820 PF02896 PEP-utilising enzyme, TIM barrel domain J165_01821 PF00924 Mechanosensitive ion channel J165_01822 PF00929 Exonuclease J165_01823 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J165_01824 PF01325 Iron dependent repressor, N-terminal DNA binding domain J165_01824 PF02742 Iron dependent repressor, metal binding and dimerisation domain J165_01825 PF01566 J165_01825 J165_01826 PF12697 Alpha/beta hydrolase family J165_01828 PF12804 MobA-like NTP transferase domain J165_01829 PF00994 Probable molybdopterin binding domain J165_01829 PF03453 MoeA N-terminal region (domain I and II) J165_01829 PF03454 MoeA C-terminal region (domain IV) J165_01830 PF04193 PQ loop repeat J165_01831 PF03372 Endonuclease/Exonuclease/phosphatase family J165_01832 PF06884 J165_01832 J165_01833 PF00107 Zinc-binding dehydrogenase J165_01833 PF08240 Alcohol dehydrogenase GroES-like domain J165_01833 PF13823 Alcohol dehydrogenase GroES-associated J165_01835 PF13628 J165_01835 J165_01837 PF00593 TonB dependent receptor J165_01837 PF07715 TonB-dependent Receptor Plug Domain J165_01838 PF00581 Rhodanese-like domain J165_01838 PF00899 ThiF family J165_01839 PF00994 Probable molybdopterin binding domain J165_01839 PF03453 MoeA N-terminal region (domain I and II) J165_01839 PF03454 MoeA C-terminal region (domain IV) J165_01840 PF01926 50S ribosome-binding GTPase J165_01840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J165_01841 PF13360 PQQ-like domain J165_01842 PF09976 Tetratricopeptide repeat J165_01843 PF13413 Helix-turn-helix domain J165_01843 PF13464 J165_01843 J165_01844 PF13432 Tetratricopeptide repeat J165_01845 PF04055 Radical SAM superfamily J165_01846 PF00334 Nucleoside diphosphate kinase J165_01847 PF00440 Bacterial regulatory proteins, tetR family J165_01848 PF00378 Enoyl-CoA hydratase/isomerase family J165_01848 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J165_01848 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J165_01849 PF00108 Thiolase, N-terminal domain J165_01849 PF02803 Thiolase, C-terminal domain J165_01851 PF02537 J165_01851 J165_01853 PF00004 ATPase family associated with various cellular activities (AAA) J165_01853 PF12002 MgsA AAA+ ATPase C terminal J165_01853 PF16193 J165_01853 J165_01855 PF03548 Outer membrane lipoprotein carrier protein LolA J165_01856 PF01841 Transglutaminase-like superfamily J165_01857 PF01580 FtsK/SpoIIIE family J165_01857 PF09397 Ftsk gamma domain J165_01857 PF13491 J165_01857 J165_01858 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_01859 PF04339 J165_01859 J165_01860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J165_01861 PF01176 Translation initiation factor 1A / IF-1 J165_01862 PF00004 ATPase family associated with various cellular activities (AAA) J165_01862 PF02861 Clp amino terminal domain J165_01862 PF07724 AAA domain (Cdc48 subfamily) J165_01862 PF10431 C-terminal, D2-small domain, of ClpB protein J165_01863 PF02617 ATP-dependent Clp protease adaptor protein ClpS J165_01864 PF00293 NUDIX domain J165_01865 PF03054 tRNA methyl transferase J165_01866 PF04356 Protein of unknown function (DUF489) J165_01867 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_01869 PF00563 EAL domain J165_01869 PF00990 GGDEF domain J165_01869 PF08447 PAS fold J165_01869 PF13426 PAS domain J165_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01870 PF07730 Histidine kinase J165_01870 PF08448 PAS fold J165_01870 PF13426 PAS domain J165_01871 PF00072 Response regulator receiver domain J165_01871 PF00563 EAL domain J165_01871 PF00990 GGDEF domain J165_01872 PF00512 His Kinase A (phospho-acceptor) domain J165_01872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01874 PF04316 Anti-sigma-28 factor, FlgM J165_01875 PF13144 SAF-like J165_01876 PF00072 Response regulator receiver domain J165_01876 PF01584 CheW-like domain J165_01877 PF00460 Flagella basal body rod protein J165_01878 PF00460 Flagella basal body rod protein J165_01878 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01879 PF03963 J165_01879 J165_01879 PF13860 FlgD Ig-like domain J165_01879 PF13861 FlgD Tudor-like domain J165_01880 PF00460 Flagella basal body rod protein J165_01880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01880 PF07559 Flagellar basal body protein FlaE J165_01881 PF00460 Flagella basal body rod protein J165_01881 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01882 PF00460 Flagella basal body rod protein J165_01882 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01883 PF02107 J165_01883 J165_01884 PF02119 J165_01884 J165_01885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J165_01885 PF10135 J165_01885 J165_01886 PF00460 Flagella basal body rod protein J165_01886 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J165_01887 PF00669 Bacterial flagellin N-terminal helical region J165_01887 PF00700 Bacterial flagellin C-terminal helical region J165_01888 PF00669 Bacterial flagellin N-terminal helical region J165_01888 PF00700 Bacterial flagellin C-terminal helical region J165_01888 PF07196 Flagellin hook IN motif J165_01889 PF02465 J165_01889 J165_01889 PF07195 J165_01889 J165_01889 PF07196 Flagellin hook IN motif J165_01890 PF02561 Flagellar protein FliS J165_01892 PF16823 J165_01892 J165_01893 PF00072 Response regulator receiver domain J165_01893 PF00196 Bacterial regulatory proteins, luxR family J165_01894 PF00309 J165_01894 J165_01894 PF04552 Sigma-54, DNA binding domain J165_01894 PF04963 Sigma-54 factor, core binding domain J165_01895 PF00072 Response regulator receiver domain J165_01896 PF00158 Sigma-54 interaction domain J165_01896 PF02954 Bacterial regulatory protein, Fis family J165_01896 PF06490 J165_01896 J165_01897 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J165_01899 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_01899 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_01900 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01901 PF13561 Enoyl-(Acyl carrier protein) reductase J165_01902 PF00132 Bacterial transferase hexapeptide (six repeats) J165_01902 PF14602 Hexapeptide repeat of succinyl-transferase J165_01903 PF00355 Rieske [2Fe-2S] domain J165_01903 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J165_01904 PF00132 Bacterial transferase hexapeptide (six repeats) J165_01905 PF05050 Methyltransferase FkbM domain J165_01907 PF00535 Glycosyl transferase family 2 J165_01908 PF02049 J165_01908 J165_01909 PF01514 Secretory protein of YscJ/FliF family J165_01909 PF08345 J165_01909 J165_01910 PF01706 FliG C-terminal domain J165_01910 PF14841 FliG middle domain J165_01910 PF14842 FliG N-terminal domain J165_01911 PF02108 J165_01911 J165_01912 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_01913 PF02050 Flagellar FliJ protein J165_01914 PF02120 Flagellar hook-length control protein FliK J165_01915 PF03748 J165_01915 J165_01916 PF01052 Surface presentation of antigens (SPOA) J165_01916 PF02154 Flagellar motor switch protein FliM J165_01917 PF01052 Surface presentation of antigens (SPOA) J165_01918 PF04347 J165_01918 J165_01919 PF00813 J165_01919 J165_01922 PF01313 J165_01922 J165_01923 PF01311 J165_01923 J165_01924 PF00990 GGDEF domain J165_01924 PF07494 Two component regulator propeller J165_01924 PF07495 Y_Y_Y domain J165_01925 PF00990 GGDEF domain J165_01925 PF07495 Y_Y_Y domain J165_01926 PF00563 EAL domain J165_01926 PF00990 GGDEF domain J165_01926 PF03707 J165_01926 J165_01927 PF01312 FlhB HrpN YscU SpaS Family J165_01928 PF00771 FHIPEP family J165_01929 PF00448 SRP54-type protein, GTPase domain J165_01930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_01931 PF04539 Sigma-70 region 3 J165_01931 PF04542 Sigma-70 region 2 J165_01931 PF04545 Sigma-70, region 4 J165_01932 PF00072 Response regulator receiver domain J165_01933 PF04344 Chemotaxis phosphatase, CheZ J165_01934 PF01584 CheW-like domain J165_01934 PF01627 Hpt domain J165_01934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_01934 PF02895 Signal transducing histidine kinase, homodimeric domain J165_01936 PF04055 Radical SAM superfamily J165_01936 PF13353 4Fe-4S single cluster domain J165_01938 PF01381 Helix-turn-helix J165_01939 PF13683 J165_01939 J165_01941 PF01527 Transposase J165_01942 PF00665 Integrase core domain J165_01942 PF13276 J165_01942 J165_01945 PF00665 Integrase core domain J165_01945 PF13936 Helix-turn-helix domain J165_01946 PF01695 IstB-like ATP binding protein J165_01947 PF13476 AAA domain J165_01951 PF13245 Part of AAA domain J165_01951 PF13361 UvrD-like helicase C-terminal domain J165_01956 PF09686 J165_01956 J165_01957 PF11660 J165_01957 J165_01958 PF11190 J165_01958 J165_01959 PF11990 J165_01959 J165_01960 PF11444 J165_01960 J165_01961 PF11920 J165_01961 J165_01964 PF11130 J165_01964 J165_01965 PF13462 Thioredoxin J165_01966 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_01966 PF03466 LysR substrate binding domain J165_01967 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_01967 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_01968 PF03401 Tripartite tricarboxylate transporter family receptor J165_01969 PF06684 Amino acid synthesis J165_01972 PF04002 RadC-like JAB domain J165_01973 PF07511 J165_01973 J165_01974 PF06834 J165_01974 J165_01976 PF01507 Phosphoadenosine phosphosulfate reductase family J165_01978 PF05930 Prophage CP4-57 regulatory protein (AlpA) J165_01979 PF00589 Phage integrase family J165_01979 PF13356 Domain of unknown function (DUF4102) J165_01979 PF14659 Phage integrase, N-terminal SAM-like domain J165_01980 PF00117 Glutamine amidotransferase class-I J165_01980 PF00958 GMP synthase C terminal domain J165_01980 PF02540 NAD synthase J165_01981 PF00478 IMP dehydrogenase / GMP reductase domain J165_01981 PF00571 CBS domain J165_01982 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J165_01982 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J165_01983 PF06844 Protein of unknown function (DUF1244) J165_01984 PF00999 Sodium/hydrogen exchanger family J165_01984 PF02254 TrkA-N domain J165_01985 PF00483 Nucleotidyl transferase J165_01986 PF02719 Polysaccharide biosynthesis protein J165_01986 PF13727 CoA-binding domain J165_01987 PF00953 Glycosyl transferase family 4 J165_01988 PF13432 Tetratricopeptide repeat J165_01989 PF06305 J165_01989 J165_01990 PF00216 Bacterial DNA-binding protein J165_01991 PF00575 S1 RNA binding domain J165_01992 PF02224 Cytidylate kinase J165_01993 PF00444 Ribosomal protein L36 J165_01996 PF04371 Porphyromonas-type peptidyl-arginine deiminase J165_01997 PF00795 Carbon-nitrogen hydrolase J165_01998 PF13420 Acetyltransferase (GNAT) domain J165_01999 PF01963 J165_01999 J165_02000 PF03372 Endonuclease/Exonuclease/phosphatase family J165_02001 PF00754 F5/8 type C domain J165_02001 PF06202 Amylo-alpha-1,6-glucosidase J165_02002 PF00528 Binding-protein-dependent transport system inner membrane component J165_02003 PF00528 Binding-protein-dependent transport system inner membrane component J165_02004 PF13416 Bacterial extracellular solute-binding protein J165_02005 PF10091 Putative glucoamylase J165_02006 PF00593 TonB dependent receptor J165_02006 PF13620 Carboxypeptidase regulatory-like domain J165_02007 PF00356 Bacterial regulatory proteins, lacI family J165_02007 PF13377 Periplasmic binding protein-like domain J165_02008 PF01722 BolA-like protein J165_02009 PF03795 YCII-related domain J165_02010 PF02616 ScpA/B protein J165_02011 PF04079 Putative transcriptional regulators (Ypuh-like) J165_02012 PF00849 RNA pseudouridylate synthase J165_02012 PF01479 S4 domain J165_02014 PF05096 Glutamine cyclotransferase J165_02015 PF00795 Carbon-nitrogen hydrolase J165_02016 PF00155 Aminotransferase class I and II J165_02017 PF00005 ABC transporter J165_02018 PF03379 J165_02018 J165_02019 PF01578 J165_02019 J165_02020 PF04995 J165_02020 J165_02021 PF03100 CcmE J165_02022 PF01578 J165_02022 J165_02022 PF16327 J165_02022 J165_02023 PF08534 Redoxin J165_02024 PF03918 Cytochrome C biogenesis protein J165_02025 PF13432 Tetratricopeptide repeat J165_02026 PF00561 alpha/beta hydrolase fold J165_02027 PF00313 'Cold-shock' DNA-binding domain J165_02027 PF06961 J165_02027 J165_02028 PF00005 ABC transporter J165_02028 PF00664 ABC transporter transmembrane region J165_02029 PF00005 ABC transporter J165_02029 PF00664 ABC transporter transmembrane region J165_02030 PF01654 J165_02030 J165_02031 PF02322 J165_02031 J165_02032 PF08173 J165_02032 J165_02034 PF07690 Major Facilitator Superfamily J165_02035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J165_02035 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J165_02036 PF00171 Aldehyde dehydrogenase family J165_02037 PF00696 Amino acid kinase family J165_02037 PF01472 PUA domain J165_02038 PF03795 YCII-related domain J165_02039 PF00206 Lyase J165_02040 PF01118 Semialdehyde dehydrogenase, NAD binding domain J165_02041 PF13302 Acetyltransferase (GNAT) domain J165_02042 PF00696 Amino acid kinase family J165_02042 PF04768 Protein of unknown function (DUF619) J165_02043 PF01546 Peptidase family M20/M25/M40 J165_02043 PF07687 Peptidase dimerisation domain J165_02044 PF13508 Acetyltransferase (GNAT) domain J165_02045 PF00764 Arginosuccinate synthase J165_02046 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J165_02046 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J165_02048 PF01406 tRNA synthetases class I (C) catalytic domain J165_02048 PF09190 DALR domain J165_02049 PF02657 Fe-S metabolism associated domain J165_02050 PF05977 Transmembrane secretion effector J165_02051 PF01258 Prokaryotic dksA/traR C4-type zinc finger J165_02052 PF01809 J165_02052 J165_02053 PF01979 Amidohydrolase family J165_02054 PF01551 Peptidase family M23 J165_02055 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_02056 PF13520 Amino acid permease J165_02057 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J165_02058 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J165_02060 PF00753 Metallo-beta-lactamase superfamily J165_02061 PF16242 J165_02061 J165_02064 PF01527 Transposase J165_02065 PF00544 Pectate lyase J165_02067 PF00295 Glycosyl hydrolases family 28 J165_02069 PF13419 Haloacid dehalogenase-like hydrolase J165_02070 PF13489 Methyltransferase domain J165_02071 PF01979 Amidohydrolase family J165_02073 PF01132 Elongation factor P (EF-P) OB domain J165_02073 PF08207 Elongation factor P (EF-P) KOW-like domain J165_02073 PF09285 Elongation factor P, C-terminal J165_02074 PF13353 4Fe-4S single cluster domain J165_02075 PF00563 EAL domain J165_02075 PF00672 HAMP domain J165_02075 PF00990 GGDEF domain J165_02075 PF17203 J165_02075 J165_02076 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein J165_02077 PF00588 SpoU rRNA Methylase family J165_02078 PF00459 Inositol monophosphatase family J165_02079 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J165_02079 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J165_02080 PF00545 ribonuclease J165_02081 PF01337 Barstar (barnase inhibitor) J165_02082 PF00005 ABC transporter J165_02082 PF12848 ABC transporter J165_02082 PF16326 J165_02082 J165_02083 PF00270 DEAD/DEAH box helicase J165_02083 PF00271 Helicase conserved C-terminal domain J165_02083 PF03880 DbpA RNA binding domain J165_02084 PF00156 Phosphoribosyl transferase domain J165_02085 PF02696 J165_02085 J165_02086 PF07859 alpha/beta hydrolase fold J165_02087 PF00043 Glutathione S-transferase, C-terminal domain J165_02087 PF02798 Glutathione S-transferase, N-terminal domain J165_02088 PF00313 'Cold-shock' DNA-binding domain J165_02089 PF07152 YaeQ protein J165_02090 PF03486 HI0933-like protein J165_02091 PF00563 EAL domain J165_02091 PF00990 GGDEF domain J165_02091 PF13188 PAS domain J165_02092 PF01435 Peptidase family M48 J165_02093 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_02094 PF00106 short chain dehydrogenase J165_02095 PF05233 J165_02095 J165_02095 PF07879 J165_02095 J165_02096 PF01963 J165_02096 J165_02097 PF07920 Protein of unknown function (DUF1684) J165_02098 PF01119 DNA mismatch repair protein, C-terminal domain J165_02098 PF08676 MutL C terminal dimerisation domain J165_02098 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02099 PF01520 N-acetylmuramoyl-L-alanine amidase J165_02099 PF11741 AMIN domain J165_02100 PF02367 Uncharacterised P-loop hydrolase UPF0079 J165_02101 PF01256 Carbohydrate kinase J165_02101 PF03853 YjeF-related protein N-terminus J165_02102 PF08331 J165_02102 J165_02102 PF13484 J165_02102 J165_02103 PF02601 J165_02103 J165_02103 PF13742 J165_02103 J165_02104 PF06057 Bacterial virulence protein (VirJ) J165_02105 PF03781 Sulfatase-modifying factor enzyme 1 J165_02106 PF00570 HRDC domain J165_02106 PF01612 3'-5' exonuclease J165_02108 PF01068 ATP dependent DNA ligase domain J165_02108 PF04679 ATP dependent DNA ligase C terminal region J165_02108 PF13298 DNA polymerase Ligase (LigD) J165_02109 PF12244 J165_02109 J165_02110 PF00816 H-NS histone family J165_02112 PF00589 Phage integrase family J165_02116 PF01609 Transposase DDE domain J165_02116 PF05598 J165_02116 J165_02117 PF00665 Integrase core domain J165_02118 PF01527 Transposase J165_02122 PF01402 Ribbon-helix-helix protein, copG family J165_02123 PF01526 J165_02123 J165_02126 PF00665 Integrase core domain J165_02126 PF13276 J165_02126 J165_02128 PF00239 Resolvase, N terminal domain J165_02129 PF13166 J165_02129 J165_02131 PF02384 N-6 DNA Methylase J165_02132 PF09572 J165_02132 J165_02134 PF07929 Plasmid pRiA4b ORF-3-like protein J165_02136 PF01402 Ribbon-helix-helix protein, copG family J165_02138 PF04796 J165_02138 J165_02139 PF13289 J165_02139 J165_02140 PF01935 Domain of unknown function DUF87 J165_02143 PF00990 GGDEF domain J165_02144 PF01584 CheW-like domain J165_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02145 PF00672 HAMP domain J165_02145 PF12729 J165_02145 J165_02146 PF02245 Methylpurine-DNA glycosylase (MPG) J165_02147 PF00270 DEAD/DEAH box helicase J165_02147 PF00271 Helicase conserved C-terminal domain J165_02147 PF08494 J165_02147 J165_02148 PF11743 J165_02148 J165_02150 PF04386 Stringent starvation protein B J165_02151 PF00043 Glutathione S-transferase, C-terminal domain J165_02151 PF13417 Glutathione S-transferase, N-terminal domain J165_02152 PF02167 Cytochrome C1 family J165_02153 PF00032 Cytochrome b(C-terminal)/b6/petD J165_02153 PF00033 Cytochrome b(N-terminal)/b6/petB J165_02154 PF00355 Rieske [2Fe-2S] domain J165_02154 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J165_02155 PF01464 Transglycosylase SLT domain J165_02156 PF08279 HTH domain J165_02156 PF13280 J165_02156 J165_02157 PF02798 Glutathione S-transferase, N-terminal domain J165_02158 PF00919 Uncharacterized protein family UPF0004 J165_02158 PF01938 TRAM domain J165_02158 PF04055 Radical SAM superfamily J165_02159 PF02562 PhoH-like protein J165_02161 PF02130 Uncharacterized protein family UPF0054 J165_02163 PF00571 CBS domain J165_02163 PF03471 Transporter associated domain J165_02164 PF13387 J165_02164 J165_02165 PF01544 CorA-like Mg2+ transporter protein J165_02166 PF00171 Aldehyde dehydrogenase family J165_02167 PF00528 Binding-protein-dependent transport system inner membrane component J165_02168 PF00528 Binding-protein-dependent transport system inner membrane component J165_02169 PF00005 ABC transporter J165_02169 PF08402 TOBE domain J165_02170 PF02321 Outer membrane efflux protein J165_02171 PF07690 Major Facilitator Superfamily J165_02172 PF13533 Biotin-lipoyl like J165_02172 PF16576 J165_02172 J165_02173 PF13416 Bacterial extracellular solute-binding protein J165_02174 PF00202 Aminotransferase class-III J165_02175 PF00120 Glutamine synthetase, catalytic domain J165_02176 PF07722 Peptidase C26 J165_02177 PF00120 Glutamine synthetase, catalytic domain J165_02178 PF01266 FAD dependent oxidoreductase J165_02179 PF00072 Response regulator receiver domain J165_02179 PF00990 GGDEF domain J165_02180 PF01814 Hemerythrin HHE cation binding domain J165_02181 PF00083 Sugar (and other) transporter J165_02181 PF07690 Major Facilitator Superfamily J165_02183 PF00384 Molybdopterin oxidoreductase J165_02183 PF01568 Molydopterin dinucleotide binding domain J165_02184 PF02634 FdhD/NarQ family J165_02185 PF07690 Major Facilitator Superfamily J165_02186 PF00202 Aminotransferase class-III J165_02188 PF04286 J165_02188 J165_02189 PF00072 Response regulator receiver domain J165_02189 PF00512 His Kinase A (phospho-acceptor) domain J165_02189 PF01627 Hpt domain J165_02189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02189 PF03924 CHASE domain J165_02189 PF13426 PAS domain J165_02190 PF00072 Response regulator receiver domain J165_02190 PF13487 HD domain J165_02191 PF07690 Major Facilitator Superfamily J165_02192 PF05088 J165_02192 J165_02192 PF12466 J165_02192 J165_02193 PF00440 Bacterial regulatory proteins, tetR family J165_02193 PF14246 AefR-like transcriptional repressor, C-terminal region J165_02194 PF16576 J165_02194 J165_02195 PF00873 AcrB/AcrD/AcrF family J165_02196 PF00356 Bacterial regulatory proteins, lacI family J165_02196 PF13377 Periplasmic binding protein-like domain J165_02197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J165_02197 PF00381 PTS HPr component phosphorylation site J165_02197 PF00391 PEP-utilising enzyme, mobile domain J165_02197 PF02896 PEP-utilising enzyme, TIM barrel domain J165_02197 PF05524 PEP-utilising enzyme, N-terminal J165_02198 PF00294 pfkB family carbohydrate kinase J165_02199 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J165_02200 PF04966 Carbohydrate-selective porin, OprB family J165_02205 PF07791 J165_02205 J165_02207 PF02355 Protein export membrane protein J165_02207 PF07549 SecD/SecF GG Motif J165_02208 PF02355 Protein export membrane protein J165_02208 PF07549 SecD/SecF GG Motif J165_02208 PF13721 SecD export protein N-terminal TM region J165_02209 PF02699 Preprotein translocase subunit J165_02210 PF01702 Queuine tRNA-ribosyltransferase J165_02211 PF02547 Queuosine biosynthesis protein J165_02212 PF01037 AsnC family J165_02212 PF13412 Winged helix-turn-helix DNA-binding J165_02213 PF00202 Aminotransferase class-III J165_02214 PF04488 Glycosyltransferase sugar-binding region containing DXD motif J165_02216 PF00149 Calcineurin-like phosphoesterase J165_02216 PF16656 J165_02216 J165_02217 PF02333 Phytase J165_02218 PF00593 TonB dependent receptor J165_02218 PF07715 TonB-dependent Receptor Plug Domain J165_02219 PF14681 Uracil phosphoribosyltransferase J165_02220 PF00759 Glycosyl hydrolase family 9 J165_02220 PF02927 N-terminal ig-like domain of cellulase J165_02221 PF01019 Gamma-glutamyltranspeptidase J165_02222 PF00037 4Fe-4S binding domain J165_02225 PF01467 Cytidylyltransferase J165_02226 PF03602 Conserved hypothetical protein 95 J165_02227 PF00183 Hsp90 protein J165_02227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02228 PF05593 J165_02228 J165_02228 PF14220 J165_02228 J165_02230 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) J165_02231 PF00593 TonB dependent receptor J165_02231 PF07715 TonB-dependent Receptor Plug Domain J165_02232 PF00326 Prolyl oligopeptidase family J165_02232 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_02233 PF04616 Glycosyl hydrolases family 43 J165_02234 PF00754 F5/8 type C domain J165_02234 PF07532 J165_02234 J165_02235 PF00593 TonB dependent receptor J165_02235 PF07715 TonB-dependent Receptor Plug Domain J165_02237 PF00082 Subtilase family J165_02237 PF09286 Pro-kumamolisin, activation domain J165_02241 PF01301 Glycosyl hydrolases family 35 J165_02242 PF00326 Prolyl oligopeptidase family J165_02242 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_02243 PF13520 Amino acid permease J165_02244 PF05960 Bacterial protein of unknown function (DUF885) J165_02245 PF05960 Bacterial protein of unknown function (DUF885) J165_02246 PF00557 Metallopeptidase family M24 J165_02246 PF01321 Creatinase/Prolidase N-terminal domain J165_02247 PF00171 Aldehyde dehydrogenase family J165_02248 PF00701 Dihydrodipicolinate synthetase family J165_02249 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_02250 PF13510 2Fe-2S iron-sulfur cluster binding domain J165_02251 PF01266 FAD dependent oxidoreductase J165_02252 PF05544 Proline racemase J165_02253 PF08448 PAS fold J165_02253 PF12833 Helix-turn-helix domain J165_02254 PF00448 SRP54-type protein, GTPase domain J165_02254 PF02881 SRP54-type protein, helical bundle domain J165_02255 PF00633 Helix-hairpin-helix motif J165_02255 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_02255 PF14815 NUDIX domain J165_02256 PF04362 Bacterial Fe(2+) trafficking J165_02257 PF00072 Response regulator receiver domain J165_02257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02257 PF13426 PAS domain J165_02259 PF10685 J165_02259 J165_02263 PF08212 Lipocalin-like domain J165_02264 PF03168 Late embryogenesis abundant protein J165_02265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02265 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02265 PF12418 J165_02265 J165_02265 PF12806 J165_02265 J165_02266 PF14279 J165_02266 J165_02267 PF02779 Transketolase, pyrimidine binding domain J165_02267 PF02780 Transketolase, C-terminal domain J165_02267 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J165_02268 PF04101 Glycosyltransferase family 28 C-terminal domain J165_02270 PF13506 Glycosyl transferase family 21 J165_02271 PF01370 NAD dependent epimerase/dehydratase family J165_02272 PF00753 Metallo-beta-lactamase superfamily J165_02273 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J165_02273 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J165_02274 PF01963 J165_02274 J165_02275 PF06172 Cupin superfamily (DUF985) J165_02276 PF03808 J165_02276 J165_02277 PF04230 J165_02277 J165_02279 PF13440 J165_02279 J165_02280 PF13692 Glycosyl transferases group 1 J165_02281 PF00534 Glycosyl transferases group 1 J165_02281 PF13439 Glycosyltransferase Family 4 J165_02282 PF01757 J165_02282 J165_02283 PF01757 J165_02283 J165_02285 PF02397 J165_02285 J165_02285 PF13727 CoA-binding domain J165_02286 PF02706 Chain length determinant protein J165_02286 PF13807 J165_02286 J165_02287 PF02563 Polysaccharide biosynthesis/export protein J165_02287 PF10531 SLBB domain J165_02289 PF13411 MerR HTH family regulatory protein J165_02290 PF00216 Bacterial DNA-binding protein J165_02291 PF01588 Putative tRNA binding domain J165_02291 PF03147 Ferredoxin-fold anticodon binding domain J165_02291 PF03483 B3/4 domain J165_02291 PF03484 tRNA synthetase B5 domain J165_02292 PF01409 tRNA synthetases class II core domain (F) J165_02292 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J165_02293 PF00453 Ribosomal protein L20 J165_02294 PF01632 Ribosomal protein L35 J165_02296 PF00707 Translation initiation factor IF-3, C-terminal domain J165_02296 PF05198 Translation initiation factor IF-3, N-terminal domain J165_02297 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_02297 PF02824 TGS domain J165_02297 PF03129 Anticodon binding domain J165_02297 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J165_02298 PF00356 Bacterial regulatory proteins, lacI family J165_02298 PF13377 Periplasmic binding protein-like domain J165_02299 PF00128 Alpha amylase, catalytic domain J165_02300 PF07690 Major Facilitator Superfamily J165_02301 PF06202 Amylo-alpha-1,6-glucosidase J165_02302 PF10566 Glycoside hydrolase 97 J165_02302 PF14508 Glycosyl-hydrolase 97 N-terminal J165_02302 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J165_02304 PF07715 TonB-dependent Receptor Plug Domain J165_02304 PF14905 Outer membrane protein beta-barrel family J165_02306 PF00128 Alpha amylase, catalytic domain J165_02307 PF01527 Transposase J165_02308 PF13683 J165_02308 J165_02310 PF05231 J165_02310 J165_02311 PF00083 Sugar (and other) transporter J165_02313 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J165_02313 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J165_02314 PF14498 Glycosyl hydrolase family 65, N-terminal domain J165_02315 PF01055 Glycosyl hydrolases family 31 J165_02315 PF07691 PA14 domain J165_02315 PF16338 J165_02315 J165_02315 PF17137 J165_02315 J165_02316 PF02449 Beta-galactosidase J165_02317 PF03629 Domain of unknown function (DUF303) J165_02317 PF13364 Beta-galactosidase jelly roll domain J165_02319 PF00593 TonB dependent receptor J165_02319 PF07715 TonB-dependent Receptor Plug Domain J165_02320 PF00593 TonB dependent receptor J165_02320 PF07715 TonB-dependent Receptor Plug Domain J165_02321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02321 PF03466 LysR substrate binding domain J165_02323 PF01081 KDPG and KHG aldolase J165_02324 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_02324 PF13378 Enolase C-terminal domain-like J165_02325 PF08450 SMP-30/Gluconolaconase/LRE-like region J165_02326 PF05035 2-keto-3-deoxy-galactonokinase J165_02327 PF00037 4Fe-4S binding domain J165_02327 PF11953 Domain of unknown function (DUF3470) J165_02329 PF00701 Dihydrodipicolinate synthetase family J165_02330 PF13740 ACT domain J165_02331 PF06877 Regulator of ribonuclease activity B J165_02332 PF00578 AhpC/TSA family J165_02333 PF02562 PhoH-like protein J165_02333 PF13638 PIN domain J165_02335 PF06912 J165_02335 J165_02336 PF08543 Phosphomethylpyrimidine kinase J165_02337 PF12146 Putative lysophospholipase J165_02340 PF00581 Rhodanese-like domain J165_02340 PF09335 J165_02340 J165_02341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02341 PF03466 LysR substrate binding domain J165_02342 PF02678 Pirin J165_02343 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02343 PF08447 PAS fold J165_02345 PF02599 Global regulator protein family J165_02346 PF01411 tRNA synthetases class II (A) J165_02346 PF02272 DHHA1 domain J165_02346 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J165_02347 PF02631 RecX family J165_02348 PF00154 recA bacterial DNA recombination protein J165_02349 PF00717 Peptidase S24-like J165_02349 PF01726 LexA DNA binding domain J165_02350 PF03109 J165_02350 J165_02351 PF02464 Competence-damaged protein J165_02352 PF01926 50S ribosome-binding GTPase J165_02352 PF13167 J165_02352 J165_02352 PF16360 J165_02352 J165_02353 PF17209 J165_02353 J165_02354 PF01715 IPP transferase J165_02355 PF00809 Pterin binding enzyme J165_02356 PF00004 ATPase family associated with various cellular activities (AAA) J165_02356 PF01434 Peptidase family M41 J165_02356 PF06480 FtsH Extracellular J165_02357 PF01728 FtsJ-like methyltransferase J165_02358 PF01985 CRS1 / YhbY (CRM) domain J165_02359 PF04430 Protein of unknown function (DUF498/DUF598) J165_02361 PF01476 LysM domain J165_02361 PF01551 Peptidase family M23 J165_02362 PF09335 J165_02362 J165_02363 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J165_02364 PF01975 Survival protein SurE J165_02365 PF01713 Smr domain J165_02366 PF01142 tRNA pseudouridine synthase D (TruD) J165_02367 PF02542 YgbB family J165_02368 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J165_02369 PF04977 Septum formation initiator J165_02370 PF00113 Enolase, C-terminal TIM barrel domain J165_02370 PF03952 Enolase, N-terminal domain J165_02372 PF00793 DAHP synthetase I family J165_02373 PF00117 Glutamine amidotransferase class-I J165_02373 PF06418 CTP synthase N-terminus J165_02375 PF00204 DNA gyrase B J165_02375 PF00986 DNA gyrase B subunit, carboxyl terminus J165_02375 PF01751 Toprim domain J165_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02376 PF00450 Serine carboxypeptidase J165_02377 PF02698 DUF218 domain J165_02378 PF01384 J165_02378 J165_02379 PF01865 Protein of unknown function DUF47 J165_02380 PF00571 CBS domain J165_02380 PF01595 J165_02380 J165_02380 PF03471 Transporter associated domain J165_02381 PF06055 J165_02381 J165_02382 PF16242 J165_02382 J165_02383 PF00296 Luciferase-like monooxygenase J165_02384 PF00083 Sugar (and other) transporter J165_02385 PF00005 ABC transporter J165_02387 PF04055 Radical SAM superfamily J165_02388 PF14907 Uncharacterised nucleotidyltransferase J165_02389 PF00534 Glycosyl transferases group 1 J165_02389 PF13579 Glycosyl transferase 4-like domain J165_02390 PF00534 Glycosyl transferases group 1 J165_02390 PF13439 Glycosyltransferase Family 4 J165_02391 PF08241 Methyltransferase domain J165_02392 PF01979 Amidohydrolase family J165_02393 PF13649 Methyltransferase domain J165_02394 PF02706 Chain length determinant protein J165_02396 PF00535 Glycosyl transferase family 2 J165_02397 PF13440 J165_02397 J165_02398 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J165_02399 PF13480 Acetyltransferase (GNAT) domain J165_02401 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02402 PF05523 WxcM-like, C-terminal J165_02403 PF01292 Prokaryotic cytochrome b561 J165_02405 PF00034 Cytochrome c J165_02408 PF04542 Sigma-70 region 2 J165_02408 PF08281 Sigma-70, region 4 J165_02410 PF00082 Subtilase family J165_02411 PF01578 J165_02411 J165_02412 PF04995 J165_02412 J165_02413 PF03100 CcmE J165_02414 PF01578 J165_02414 J165_02414 PF16327 J165_02414 J165_02415 PF00578 AhpC/TSA family J165_02416 PF03918 Cytochrome C biogenesis protein J165_02418 PF00072 Response regulator receiver domain J165_02418 PF00512 His Kinase A (phospho-acceptor) domain J165_02418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02418 PF08448 PAS fold J165_02419 PF06745 KaiC J165_02420 PF00072 Response regulator receiver domain J165_02421 PF00072 Response regulator receiver domain J165_02421 PF00512 His Kinase A (phospho-acceptor) domain J165_02421 PF00989 PAS fold J165_02421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02421 PF08447 PAS fold J165_02421 PF08448 PAS fold J165_02422 PF01047 MarR family J165_02423 PF01494 FAD binding domain J165_02424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02424 PF12729 J165_02424 J165_02425 PF04343 J165_02425 J165_02426 PF00589 Phage integrase family J165_02426 PF13356 Domain of unknown function (DUF4102) J165_02427 PF02399 J165_02427 J165_02429 PF00665 Integrase core domain J165_02429 PF13276 J165_02429 J165_02430 PF01527 Transposase J165_02431 PF13560 Helix-turn-helix domain J165_02432 PF05284 J165_02432 J165_02433 PF04002 RadC-like JAB domain J165_02434 PF05930 Prophage CP4-57 regulatory protein (AlpA) J165_02436 PF08843 Nucleotidyl transferase of unknown function (DUF1814) J165_02437 PF11459 J165_02437 J165_02437 PF17194 J165_02437 J165_02438 PF00589 Phage integrase family J165_02438 PF13356 Domain of unknown function (DUF4102) J165_02438 PF14659 Phage integrase, N-terminal SAM-like domain J165_02441 PF00593 TonB dependent receptor J165_02441 PF07715 TonB-dependent Receptor Plug Domain J165_02442 PF07916 J165_02442 J165_02443 PF12553 J165_02443 J165_02444 PF01850 PIN domain J165_02445 PF04014 Antidote-toxin recognition MazE J165_02446 PF16263 J165_02446 J165_02448 PF04542 Sigma-70 region 2 J165_02448 PF08281 Sigma-70, region 4 J165_02449 PF04773 FecR protein J165_02449 PF16220 J165_02449 J165_02450 PF00593 TonB dependent receptor J165_02450 PF07715 TonB-dependent Receptor Plug Domain J165_02452 PF10947 J165_02452 J165_02453 PF07514 Putative helicase J165_02453 PF07515 Protein of unknown function (DUF1528) J165_02454 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J165_02454 PF05345 Putative Ig domain J165_02454 PF06594 J165_02454 J165_02457 PF13437 HlyD family secretion protein J165_02457 PF13533 Biotin-lipoyl like J165_02458 PF00005 ABC transporter J165_02458 PF00664 ABC transporter transmembrane region J165_02459 PF05930 Prophage CP4-57 regulatory protein (AlpA) J165_02460 PF13614 AAA domain J165_02464 PF11198 J165_02464 J165_02466 PF08900 J165_02466 J165_02467 PF11358 J165_02467 J165_02468 PF00436 Single-strand binding protein family J165_02469 PF01131 DNA topoisomerase J165_02469 PF01751 Toprim domain J165_02470 PF01131 DNA topoisomerase J165_02470 PF01396 J165_02470 J165_02471 PF00145 C-5 cytosine-specific DNA methylase J165_02473 PF13304 AAA domain J165_02481 PF11284 J165_02481 J165_02482 PF00589 Phage integrase family J165_02482 PF13356 Domain of unknown function (DUF4102) J165_02482 PF14659 Phage integrase, N-terminal SAM-like domain J165_02483 PF06250 J165_02483 J165_02484 PF01527 Transposase J165_02485 PF00665 Integrase core domain J165_02485 PF13276 J165_02485 J165_02490 PF01609 Transposase DDE domain J165_02492 PF08845 J165_02492 J165_02495 PF00069 Protein kinase domain J165_02496 PF00593 TonB dependent receptor J165_02496 PF07715 TonB-dependent Receptor Plug Domain J165_02498 PF01618 J165_02498 J165_02499 PF00691 OmpA family J165_02499 PF13677 J165_02499 J165_02500 PF13614 AAA domain J165_02501 PF01584 CheW-like domain J165_02502 PF13466 STAS domain J165_02503 PF00072 Response regulator receiver domain J165_02504 PF01584 CheW-like domain J165_02504 PF01627 Hpt domain J165_02504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02504 PF02895 Signal transducing histidine kinase, homodimeric domain J165_02505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02505 PF00672 HAMP domain J165_02505 PF12729 J165_02505 J165_02507 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02507 PF17200 J165_02507 J165_02508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02508 PF00672 HAMP domain J165_02508 PF02743 Cache domain J165_02509 PF13557 J165_02509 J165_02510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02511 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02511 PF12729 J165_02511 J165_02512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02512 PF00672 HAMP domain J165_02512 PF12729 J165_02512 J165_02513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02513 PF00672 HAMP domain J165_02513 PF05227 CHASE3 domain J165_02514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02514 PF12729 J165_02514 J165_02515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02515 PF00672 HAMP domain J165_02516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02516 PF00672 HAMP domain J165_02516 PF12729 J165_02516 J165_02517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02517 PF00672 HAMP domain J165_02517 PF12729 J165_02517 J165_02518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02518 PF17201 J165_02518 J165_02519 PF07238 PilZ domain J165_02519 PF07317 Flagellar regulator YcgR J165_02520 PF01584 CheW-like domain J165_02522 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_02522 PF00672 HAMP domain J165_02522 PF12729 J165_02522 J165_02523 PF01739 CheR methyltransferase, SAM binding domain J165_02523 PF03705 CheR methyltransferase, all-alpha domain J165_02524 PF03975 CheD chemotactic sensory transduction J165_02525 PF00072 Response regulator receiver domain J165_02525 PF01339 CheB methylesterase J165_02526 PF00563 EAL domain J165_02526 PF00990 GGDEF domain J165_02526 PF13185 GAF domain J165_02526 PF13426 PAS domain J165_02527 PF00561 alpha/beta hydrolase fold J165_02528 PF00330 Aconitase family (aconitate hydratase) J165_02528 PF06434 Aconitate hydratase 2 N-terminus J165_02528 PF11791 Aconitate B N-terminal domain J165_02529 PF01850 PIN domain J165_02530 PF04014 Antidote-toxin recognition MazE J165_02531 PF00330 Aconitase family (aconitate hydratase) J165_02531 PF00694 Aconitase C-terminal domain J165_02533 PF00501 AMP-binding enzyme J165_02533 PF13193 AMP-binding enzyme C-terminal domain J165_02534 PF00378 Enoyl-CoA hydratase/isomerase family J165_02535 PF00072 Response regulator receiver domain J165_02535 PF00512 His Kinase A (phospho-acceptor) domain J165_02535 PF01627 Hpt domain J165_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02536 PF00072 Response regulator receiver domain J165_02536 PF01966 HD domain J165_02537 PF00152 tRNA synthetases class II (D, K and N) J165_02537 PF01336 OB-fold nucleic acid binding domain J165_02538 PF00472 RF-1 domain J165_02538 PF03462 PCRF domain J165_02539 PF04397 LytTr DNA-binding domain J165_02540 PF01757 J165_02540 J165_02544 PF15649 J165_02544 J165_02546 PF05593 J165_02546 J165_02547 PF01368 DHH family J165_02547 PF02272 DHHA1 domain J165_02549 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_02549 PF03449 Transcription elongation factor, N-terminal J165_02550 PF02142 MGS-like domain J165_02550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_02550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J165_02552 PF00117 Glutamine amidotransferase class-I J165_02552 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J165_02553 PF01113 Dihydrodipicolinate reductase, N-terminus J165_02553 PF05173 Dihydrodipicolinate reductase, C-terminus J165_02554 PF03473 MOSC domain J165_02554 PF03475 3-alpha domain J165_02555 PF00155 Aminotransferase class I and II J165_02558 PF02421 Ferrous iron transport protein B J165_02558 PF07664 J165_02558 J165_02558 PF07670 Nucleoside recognition J165_02559 PF04023 FeoA domain J165_02560 PF00378 Enoyl-CoA hydratase/isomerase family J165_02561 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_02562 PF00682 HMGL-like J165_02563 PF00106 short chain dehydrogenase J165_02564 PF01132 Elongation factor P (EF-P) OB domain J165_02564 PF08207 Elongation factor P (EF-P) KOW-like domain J165_02564 PF09285 Elongation factor P, C-terminal J165_02566 PF13387 J165_02566 J165_02567 PF09498 J165_02567 J165_02568 PF01565 FAD binding domain J165_02568 PF02913 FAD linked oxidases, C-terminal domain J165_02569 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J165_02569 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J165_02570 PF00293 NUDIX domain J165_02571 PF13520 Amino acid permease J165_02572 PF13520 Amino acid permease J165_02573 PF00596 Class II Aldolase and Adducin N-terminal domain J165_02574 PF03079 ARD/ARD' family J165_02576 PF01650 Peptidase C13 family J165_02577 PF00149 Calcineurin-like phosphoesterase J165_02577 PF16370 J165_02577 J165_02577 PF16371 J165_02577 J165_02578 PF01502 Phosphoribosyl-AMP cyclohydrolase J165_02578 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J165_02579 PF00977 Histidine biosynthesis protein J165_02580 PF00977 Histidine biosynthesis protein J165_02581 PF00117 Glutamine amidotransferase class-I J165_02582 PF00475 Imidazoleglycerol-phosphate dehydratase J165_02582 PF13242 HAD-hyrolase-like J165_02583 PF00155 Aminotransferase class I and II J165_02584 PF00815 Histidinol dehydrogenase J165_02585 PF01634 ATP phosphoribosyltransferase J165_02585 PF08029 HisG, C-terminal domain J165_02586 PF01371 Trp repressor protein J165_02587 PF03129 Anticodon binding domain J165_02587 PF13393 Histidyl-tRNA synthetase J165_02588 PF00027 Cyclic nucleotide-binding domain J165_02588 PF13545 Crp-like helix-turn-helix domain J165_02589 PF13645 J165_02589 J165_02590 PF00291 Pyridoxal-phosphate dependent enzyme J165_02590 PF14821 Threonine synthase N terminus J165_02591 PF07110 EthD domain J165_02592 PF00288 GHMP kinases N terminal domain J165_02592 PF08544 GHMP kinases C terminal J165_02593 PF00696 Amino acid kinase family J165_02593 PF00742 Homoserine dehydrogenase J165_02593 PF03447 Homoserine dehydrogenase, NAD binding domain J165_02593 PF13840 ACT domain J165_02594 PF03073 TspO/MBR family J165_02595 PF05594 J165_02595 J165_02597 PF05594 J165_02597 J165_02597 PF13332 J165_02597 J165_02598 PF05594 J165_02598 J165_02598 PF05860 haemagglutination activity domain J165_02598 PF13332 J165_02598 J165_02599 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J165_02599 PF08479 POTRA domain, ShlB-type J165_02599 PF17287 J165_02599 J165_02600 PF13432 Tetratricopeptide repeat J165_02600 PF14559 Tetratricopeptide repeat J165_02601 PF01522 Polysaccharide deacetylase J165_02601 PF14883 Hypothetical glycosyl hydrolase family 13 J165_02602 PF13641 Glycosyltransferase like family 2 J165_02603 PF13994 J165_02603 J165_02605 PF00171 Aldehyde dehydrogenase family J165_02606 PF13828 J165_02606 J165_02607 PF08241 Methyltransferase domain J165_02608 PF01180 Dihydroorotate dehydrogenase J165_02609 PF01565 FAD binding domain J165_02609 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J165_02610 PF00892 EamA-like transporter family J165_02611 PF01177 Asp/Glu/Hydantoin racemase J165_02612 PF07690 Major Facilitator Superfamily J165_02613 PF01569 PAP2 superfamily J165_02614 PF04551 GcpE protein J165_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_02616 PF00072 Response regulator receiver domain J165_02616 PF02954 Bacterial regulatory protein, Fis family J165_02617 PF00150 Cellulase (glycosyl hydrolase family 5) J165_02618 PF00563 EAL domain J165_02618 PF00990 GGDEF domain J165_02618 PF01590 GAF domain J165_02619 PF00474 Sodium:solute symporter family J165_02620 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_02620 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_02621 PF05787 Bacterial protein of unknown function (DUF839) J165_02623 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J165_02624 PF00342 Phosphoglucose isomerase J165_02625 PF02261 Aspartate decarboxylase J165_02626 PF02569 Pantoate-beta-alanine ligase J165_02627 PF02548 Ketopantoate hydroxymethyltransferase J165_02628 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J165_02629 PF01743 Poly A polymerase head domain J165_02629 PF12626 Polymerase A arginine-rich C-terminus J165_02629 PF12627 Probable RNA and SrmB- binding site of polymerase A J165_02633 PF02649 Type I GTP cyclohydrolase folE2 J165_02634 PF01520 N-acetylmuramoyl-L-alanine amidase J165_02634 PF11741 AMIN domain J165_02636 PF00128 Alpha amylase, catalytic domain J165_02638 PF01527 Transposase J165_02639 PF13683 J165_02639 J165_02640 PF07007 Protein of unknown function (DUF1311) J165_02641 PF04610 J165_02641 J165_02643 PF00182 Chitinase class I J165_02643 PF01471 Putative peptidoglycan binding domain J165_02645 PF04610 J165_02645 J165_02647 PF03135 J165_02647 J165_02648 PF05101 J165_02648 J165_02649 PF04956 J165_02649 J165_02650 PF01464 Transglycosylase SLT domain J165_02651 PF00437 Type II/IV secretion system protein J165_02652 PF03743 Bacterial conjugation TrbI-like protein J165_02653 PF03524 Conjugal transfer protein J165_02654 PF04335 VirB8 protein J165_02655 PF10671 Toxin co-regulated pilus biosynthesis protein Q J165_02656 PF02534 Type IV secretory system Conjugative DNA transfer J165_02659 PF00271 Helicase conserved C-terminal domain J165_02659 PF02151 UvrB/uvrC motif J165_02659 PF04851 Type III restriction enzyme, res subunit J165_02659 PF12344 Ultra-violet resistance protein B J165_02667 PF01527 Transposase J165_02668 PF00665 Integrase core domain J165_02668 PF13276 J165_02668 J165_02669 PF13936 Helix-turn-helix domain J165_02674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02674 PF03466 LysR substrate binding domain J165_02675 PF02525 Flavodoxin-like fold J165_02676 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_02676 PF02403 Seryl-tRNA synthetase N-terminal domain J165_02677 PF03544 Gram-negative bacterial TonB protein C-terminal J165_02678 PF03544 Gram-negative bacterial TonB protein C-terminal J165_02679 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J165_02680 PF00800 Prephenate dehydratase J165_02680 PF01817 Chorismate mutase type II J165_02680 PF01842 ACT domain J165_02681 PF00266 Aminotransferase class-V J165_02682 PF00174 Oxidoreductase molybdopterin binding domain J165_02683 PF01794 J165_02683 J165_02684 PF16697 J165_02684 J165_02685 PF09650 J165_02685 J165_02686 PF05597 J165_02686 J165_02688 PF04471 Restriction endonuclease J165_02689 PF00392 Bacterial regulatory proteins, gntR family J165_02689 PF07702 UTRA domain J165_02690 PF01979 Amidohydrolase family J165_02691 PF07969 Amidohydrolase family J165_02692 PF00221 Aromatic amino acid lyase J165_02693 PF05013 N-formylglutamate amidohydrolase J165_02694 PF01175 Urocanase J165_02694 PF17391 J165_02694 J165_02694 PF17392 J165_02694 J165_02696 PF00521 DNA gyrase/topoisomerase IV, subunit A J165_02696 PF03989 DNA gyrase C-terminal domain, beta-propeller J165_02697 PF01008 Initiation factor 2 subunit family J165_02698 PF11218 J165_02698 J165_02699 PF00152 tRNA synthetases class II (D, K and N) J165_02700 PF00533 BRCA1 C Terminus (BRCT) domain J165_02700 PF01653 NAD-dependent DNA ligase adenylation domain J165_02700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J165_02700 PF03120 NAD-dependent DNA ligase OB-fold domain J165_02700 PF12826 Helix-hairpin-helix motif J165_02701 PF00155 Aminotransferase class I and II J165_02703 PF04354 ZipA, C-terminal FtsZ-binding domain J165_02704 PF02463 RecF/RecN/SMC N terminal domain J165_02705 PF01281 Ribosomal protein L9, N-terminal domain J165_02705 PF03948 Ribosomal protein L9, C-terminal domain J165_02706 PF01084 Ribosomal protein S18 J165_02707 PF01250 Ribosomal protein S6 J165_02708 PF01521 Iron-sulphur cluster biosynthesis J165_02709 PF00152 tRNA synthetases class II (D, K and N) J165_02709 PF01336 OB-fold nucleic acid binding domain J165_02713 PF04299 Putative FMN-binding domain J165_02715 PF00161 Ribosome inactivating protein J165_02716 PF00072 Response regulator receiver domain J165_02716 PF00196 Bacterial regulatory proteins, luxR family J165_02722 PF11655 J165_02722 J165_02723 PF11655 J165_02723 J165_02724 PF05838 Glycosyl hydrolase 108 J165_02724 PF09374 Predicted Peptidoglycan domain J165_02725 PF00484 Carbonic anhydrase J165_02726 PF06052 3-hydroxyanthranilic acid dioxygenase J165_02727 PF12805 J165_02727 J165_02727 PF13515 J165_02727 J165_02728 PF00266 Aminotransferase class-V J165_02729 PF01494 FAD binding domain J165_02730 PF00929 Exonuclease J165_02730 PF08411 Exonuclease C-terminal J165_02731 PF09365 J165_02731 J165_02732 PF11159 J165_02732 J165_02733 PF06189 J165_02733 J165_02734 PF01513 ATP-NAD kinase J165_02735 PF01170 Putative RNA methylase family UPF0020 J165_02735 PF02926 THUMP domain J165_02735 PF10672 S-adenosylmethionine-dependent methyltransferase J165_02736 PF00005 ABC transporter J165_02737 PF00583 Acetyltransferase (GNAT) family J165_02738 PF05728 Uncharacterised protein family (UPF0227) J165_02739 PF03473 MOSC domain J165_02740 PF01510 N-acetylmuramoyl-L-alanine amidase J165_02741 PF07920 Protein of unknown function (DUF1684) J165_02742 PF00581 Rhodanese-like domain J165_02743 PF00293 NUDIX domain J165_02743 PF06945 J165_02743 J165_02744 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02744 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J165_02745 PF00378 Enoyl-CoA hydratase/isomerase family J165_02747 PF00633 Helix-hairpin-helix motif J165_02747 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_02748 PF00916 J165_02748 J165_02749 PF00484 Carbonic anhydrase J165_02751 PF07396 Phosphate-selective porin O and P J165_02752 PF12849 PBP superfamily domain J165_02753 PF12849 PBP superfamily domain J165_02754 PF00528 Binding-protein-dependent transport system inner membrane component J165_02755 PF00528 Binding-protein-dependent transport system inner membrane component J165_02756 PF00005 ABC transporter J165_02757 PF01895 PhoU domain J165_02758 PF11776 Domain of unknown function (DUF3315) J165_02759 PF00929 Exonuclease J165_02760 PF00990 GGDEF domain J165_02760 PF07494 Two component regulator propeller J165_02760 PF07495 Y_Y_Y domain J165_02761 PF00588 SpoU rRNA Methylase family J165_02761 PF08032 RNA 2'-O ribose methyltransferase substrate binding J165_02762 PF04828 Glutathione-dependent formaldehyde-activating enzyme J165_02763 PF00575 S1 RNA binding domain J165_02763 PF00773 RNB domain J165_02763 PF08206 Ribonuclease B OB domain J165_02765 PF13472 GDSL-like Lipase/Acylhydrolase family J165_02766 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02766 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02766 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02767 PF01022 Bacterial regulatory protein, arsR family J165_02767 PF08241 Methyltransferase domain J165_02768 PF02574 Homocysteine S-methyltransferase J165_02769 PF00809 Pterin binding enzyme J165_02769 PF02310 B12 binding domain J165_02769 PF02607 B12 binding domain J165_02769 PF02965 Vitamin B12 dependent methionine synthase, activation domain J165_02770 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) J165_02771 PF00294 pfkB family carbohydrate kinase J165_02772 PF07690 Major Facilitator Superfamily J165_02773 PF00356 Bacterial regulatory proteins, lacI family J165_02773 PF13377 Periplasmic binding protein-like domain J165_02774 PF13557 J165_02774 J165_02775 PF09831 J165_02775 J165_02776 PF04102 SlyX J165_02777 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_02777 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_02777 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_02778 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02778 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J165_02779 PF00255 Glutathione peroxidase J165_02781 PF00392 Bacterial regulatory proteins, gntR family J165_02782 PF00005 ABC transporter J165_02785 PF11101 J165_02785 J165_02787 PF00206 Lyase J165_02787 PF10415 Fumarase C C-terminus J165_02788 PF00571 CBS domain J165_02788 PF01595 J165_02788 J165_02788 PF03471 Transporter associated domain J165_02789 PF00188 Cysteine-rich secretory protein family J165_02790 PF00206 Lyase J165_02790 PF08328 Adenylosuccinate lyase C-terminal J165_02791 PF11259 J165_02791 J165_02792 PF08007 Cupin superfamily protein J165_02793 PF13673 Acetyltransferase (GNAT) domain J165_02794 PF00676 Dehydrogenase E1 component J165_02794 PF02779 Transketolase, pyrimidine binding domain J165_02794 PF16078 J165_02794 J165_02794 PF16870 J165_02794 J165_02795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_02795 PF00364 Biotin-requiring enzyme J165_02795 PF02817 e3 binding domain J165_02796 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_02796 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_02797 PF03641 Possible lysine decarboxylase J165_02798 PF01205 Uncharacterized protein family UPF0029 J165_02798 PF09186 Domain of unknown function (DUF1949) J165_02799 PF00005 ABC transporter J165_02799 PF00664 ABC transporter transmembrane region J165_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02800 PF03466 LysR substrate binding domain J165_02802 PF16576 J165_02802 J165_02803 PF02321 Outer membrane efflux protein J165_02805 PF01842 ACT domain J165_02805 PF02153 Prephenate dehydrogenase J165_02806 PF08543 Phosphomethylpyrimidine kinase J165_02808 PF00226 DnaJ domain J165_02808 PF00684 DnaJ central domain J165_02808 PF01556 DnaJ C terminal domain J165_02809 PF00012 Hsp70 protein J165_02810 PF01025 GrpE J165_02811 PF01628 HrcA protein C terminal domain J165_02811 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J165_02812 PF02463 RecF/RecN/SMC N terminal domain J165_02813 PF01475 Ferric uptake regulator family J165_02814 PF04355 SmpA / OmlA family J165_02815 PF03658 RnfH family Ubiquitin J165_02816 PF03364 Polyketide cyclase / dehydrase and lipid transport J165_02817 PF01668 SmpB protein J165_02818 PF00082 Subtilase family J165_02820 PF00589 Phage integrase family J165_02821 PF13910 J165_02821 J165_02824 PF03389 MobA/MobL family J165_02826 PF00665 Integrase core domain J165_02827 PF01527 Transposase J165_02830 PF02661 Fic/DOC family J165_02831 PF01381 Helix-turn-helix J165_02835 PF05598 J165_02835 J165_02836 PF00589 Phage integrase family J165_02840 PF06114 Domain of unknown function (DUF955) J165_02846 PF00990 GGDEF domain J165_02846 PF05227 CHASE3 domain J165_02846 PF13185 GAF domain J165_02848 PF00990 GGDEF domain J165_02849 PF02321 Outer membrane efflux protein J165_02850 PF00106 short chain dehydrogenase J165_02851 PF00873 AcrB/AcrD/AcrF family J165_02852 PF16576 J165_02852 J165_02853 PF00106 short chain dehydrogenase J165_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_02855 PF03466 LysR substrate binding domain J165_02857 PF00691 OmpA family J165_02857 PF13488 J165_02857 J165_02858 PF00875 DNA photolyase J165_02858 PF03441 FAD binding domain of DNA photolyase J165_02859 PF00772 DnaB-like helicase N terminal domain J165_02859 PF03796 DnaB-like helicase C terminal domain J165_02860 PF03358 NADPH-dependent FMN reductase J165_02861 PF00733 Asparagine synthase J165_02861 PF13537 Glutamine amidotransferase domain J165_02862 PF00043 Glutathione S-transferase, C-terminal domain J165_02862 PF02798 Glutathione S-transferase, N-terminal domain J165_02863 PF01841 Transglutaminase-like superfamily J165_02863 PF12969 Domain of Unknown Function with PDB structure (DUF3857) J165_02864 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_02864 PF02770 Acyl-CoA dehydrogenase, middle domain J165_02864 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_02865 PF05433 J165_02865 J165_02867 PF01026 TatD related DNase J165_02868 PF00899 ThiF family J165_02869 PF01322 Cytochrome C' J165_02870 PF05433 J165_02870 J165_02871 PF00313 'Cold-shock' DNA-binding domain J165_02872 PF04306 J165_02872 J165_02873 PF02253 Phospholipase A1 J165_02874 PF00484 Carbonic anhydrase J165_02875 PF02798 Glutathione S-transferase, N-terminal domain J165_02875 PF14497 Glutathione S-transferase, C-terminal domain J165_02876 PF05681 J165_02876 J165_02876 PF05683 Fumarase C-terminus J165_02877 PF00005 ABC transporter J165_02878 PF00175 Oxidoreductase NAD-binding domain J165_02878 PF00970 Oxidoreductase FAD-binding domain J165_02879 PF00255 Glutathione peroxidase J165_02880 PF01432 Peptidase family M3 J165_02881 PF01047 MarR family J165_02883 PF14542 GCN5-related N-acetyl-transferase J165_02885 PF01694 Rhomboid family J165_02886 PF00854 POT family J165_02887 PF00246 Zinc carboxypeptidase J165_02888 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_02888 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_02888 PF14310 Fibronectin type III-like domain J165_02890 PF07690 Major Facilitator Superfamily J165_02891 PF00529 HlyD family secretion protein J165_02891 PF16576 J165_02891 J165_02892 PF02321 Outer membrane efflux protein J165_02893 PF01047 MarR family J165_02894 PF02311 AraC-like ligand binding domain J165_02894 PF12833 Helix-turn-helix domain J165_02895 PF00521 DNA gyrase/topoisomerase IV, subunit A J165_02895 PF03989 DNA gyrase C-terminal domain, beta-propeller J165_02897 PF05724 Thiopurine S-methyltransferase (TPMT) J165_02898 PF00210 Ferritin-like domain J165_02899 PF01804 Penicillin amidase J165_02900 PF00593 TonB dependent receptor J165_02900 PF07715 TonB-dependent Receptor Plug Domain J165_02901 PF13229 Right handed beta helix region J165_02902 PF00733 Asparagine synthase J165_02902 PF13537 Glutamine amidotransferase domain J165_02903 PF01546 Peptidase family M20/M25/M40 J165_02903 PF07687 Peptidase dimerisation domain J165_02904 PF03960 ArsC family J165_02905 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02905 PF14602 Hexapeptide repeat of succinyl-transferase J165_02905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J165_02906 PF01909 Nucleotidyltransferase domain J165_02906 PF01966 HD domain J165_02906 PF08335 GlnD PII-uridylyltransferase J165_02907 PF00557 Metallopeptidase family M24 J165_02908 PF05229 J165_02908 J165_02909 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J165_02910 PF00577 Outer membrane usher protein J165_02910 PF13953 PapC C-terminal domain J165_02911 PF05229 J165_02911 J165_02913 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J165_02914 PF00318 Ribosomal protein S2 J165_02915 PF00889 Elongation factor TS J165_02916 PF00990 GGDEF domain J165_02916 PF08668 HDOD domain J165_02917 PF00696 Amino acid kinase family J165_02918 PF01765 Ribosome recycling factor J165_02919 PF01255 Putative undecaprenyl diphosphate synthase J165_02920 PF01148 Cytidylyltransferase family J165_02921 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J165_02921 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal J165_02921 PF13288 DXP reductoisomerase C-terminal domain J165_02922 PF02163 Peptidase family M50 J165_02923 PF01103 Surface antigen J165_02923 PF07244 Surface antigen variable number repeat J165_02925 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J165_02926 PF07977 FabA-like domain J165_02927 PF00132 Bacterial transferase hexapeptide (six repeats) J165_02927 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J165_02928 PF02684 J165_02928 J165_02929 PF01351 Ribonuclease HII J165_02930 PF01336 OB-fold nucleic acid binding domain J165_02930 PF02811 PHP domain J165_02930 PF07733 Bacterial DNA polymerase III alpha subunit J165_02930 PF14579 Helix-hairpin-helix motif J165_02931 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J165_02932 PF14559 Tetratricopeptide repeat J165_02934 PF03653 J165_02934 J165_02935 PF13489 Methyltransferase domain J165_02936 PF06850 J165_02936 J165_02937 PF13796 J165_02937 J165_02938 PF03551 Transcriptional regulator PadR-like family J165_02939 PF13372 Alginate export J165_02941 PF04367 J165_02941 J165_02942 PF02592 J165_02942 J165_02943 PF05960 Bacterial protein of unknown function (DUF885) J165_02944 PF02574 Homocysteine S-methyltransferase J165_02945 PF00324 Amino acid permease J165_02946 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_02947 PF00005 ABC transporter J165_02948 PF01433 Peptidase family M1 J165_02948 PF12679 J165_02948 J165_02949 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J165_02950 PF01588 Putative tRNA binding domain J165_02950 PF09334 tRNA synthetases class I (M) J165_02951 PF12710 haloacid dehalogenase-like hydrolase J165_02952 PF04060 Putative Fe-S cluster J165_02952 PF14697 4Fe-4S dicluster domain J165_02955 PF04542 Sigma-70 region 2 J165_02955 PF08281 Sigma-70, region 4 J165_02956 PF10099 J165_02956 J165_02957 PF00487 J165_02957 J165_02958 PF01593 Flavin containing amine oxidoreductase J165_02959 PF07103 J165_02959 J165_02960 PF02353 Mycolic acid cyclopropane synthetase J165_02961 PF11086 J165_02961 J165_02962 PF06966 J165_02962 J165_02963 PF02353 Mycolic acid cyclopropane synthetase J165_02964 PF01042 Endoribonuclease L-PSP J165_02965 PF06197 J165_02965 J165_02967 PF03706 J165_02967 J165_02967 PF09924 Uncharacterized conserved protein (DUF2156) J165_02968 PF06057 Bacterial virulence protein (VirJ) J165_02969 PF09791 J165_02969 J165_02971 PF13563 2'-5' RNA ligase superfamily J165_02972 PF09537 Domain of unknown function (DUF2383) J165_02974 PF07690 Major Facilitator Superfamily J165_02975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_02976 PF03831 PhnA protein J165_02976 PF08274 PhnA Zinc-Ribbon J165_02977 PF01545 Cation efflux family J165_02978 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J165_02979 PF06723 MreB/Mbl protein J165_02981 PF00924 Mechanosensitive ion channel J165_02982 PF01258 Prokaryotic dksA/traR C4-type zinc finger J165_02983 PF10982 Protein of unknown function (DUF2789) J165_02984 PF07043 J165_02984 J165_02985 PF01863 Protein of unknown function DUF45 J165_02986 PF13640 2OG-Fe(II) oxygenase superfamily J165_02987 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J165_02987 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J165_02988 PF00082 Subtilase family J165_02988 PF03797 Autotransporter beta-domain J165_02988 PF12951 J165_02988 J165_02989 PF00108 Thiolase, N-terminal domain J165_02989 PF02803 Thiolase, C-terminal domain J165_02992 PF00990 GGDEF domain J165_02992 PF05227 CHASE3 domain J165_02992 PF13185 GAF domain J165_02993 PF04519 J165_02993 J165_02997 PF01068 ATP dependent DNA ligase domain J165_02997 PF04675 DNA ligase N terminus J165_02997 PF04679 ATP dependent DNA ligase C terminal region J165_02998 PF00270 DEAD/DEAH box helicase J165_02998 PF00271 Helicase conserved C-terminal domain J165_02998 PF08494 J165_02998 J165_02999 PF00149 Calcineurin-like phosphoesterase J165_03000 PF01494 FAD binding domain J165_03001 PF00313 'Cold-shock' DNA-binding domain J165_03002 PF01048 Phosphorylase superfamily J165_03003 PF00156 Phosphoribosyl transferase domain J165_03004 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_03005 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J165_03006 PF13450 NAD(P)-binding Rossmann-like domain J165_03007 PF01323 DSBA-like thioredoxin domain J165_03008 PF01928 CYTH domain J165_03009 PF05958 tRNA (Uracil-5-)-methyltransferase J165_03010 PF00072 Response regulator receiver domain J165_03010 PF01627 Hpt domain J165_03011 PF02565 Recombination protein O C terminal J165_03011 PF11967 Recombination protein O N terminal J165_03012 PF01926 50S ribosome-binding GTPase J165_03012 PF07650 KH domain J165_03013 PF00035 Double-stranded RNA binding motif J165_03013 PF14622 Ribonuclease-III-like J165_03014 PF16137 J165_03014 J165_03015 PF00717 Peptidase S24-like J165_03016 PF00009 Elongation factor Tu GTP binding domain J165_03016 PF00679 Elongation factor G C-terminus J165_03016 PF03144 Elongation factor Tu domain 2 J165_03016 PF06421 GTP-binding protein LepA C-terminus J165_03017 PF13180 PDZ domain J165_03017 PF13365 Trypsin-like peptidase domain J165_03018 PF03872 Anti sigma-E protein RseA, N-terminal domain J165_03019 PF04542 Sigma-70 region 2 J165_03019 PF08281 Sigma-70, region 4 J165_03020 PF00378 Enoyl-CoA hydratase/isomerase family J165_03020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J165_03020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J165_03021 PF01545 Cation efflux family J165_03022 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_03022 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J165_03023 PF16113 J165_03023 J165_03024 PF00378 Enoyl-CoA hydratase/isomerase family J165_03025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_03025 PF02770 Acyl-CoA dehydrogenase, middle domain J165_03025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03026 PF00171 Aldehyde dehydrogenase family J165_03027 PF06114 Domain of unknown function (DUF955) J165_03027 PF09856 J165_03027 J165_03027 PF13560 Helix-turn-helix domain J165_03028 PF00593 TonB dependent receptor J165_03028 PF07715 TonB-dependent Receptor Plug Domain J165_03029 PF07745 Glycosyl hydrolase family 53 J165_03030 PF00703 Glycosyl hydrolases family 2 J165_03030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_03030 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_03030 PF16355 J165_03030 J165_03032 PF00754 F5/8 type C domain J165_03032 PF01120 Alpha-L-fucosidase J165_03033 PF14085 J165_03033 J165_03035 PF05593 J165_03035 J165_03037 PF00488 MutS domain V J165_03037 PF01624 MutS domain I J165_03037 PF05188 MutS domain II J165_03037 PF05190 MutS family domain IV J165_03037 PF05192 MutS domain III J165_03038 PF06078 Bacterial protein of unknown function (DUF937) J165_03039 PF00141 Peroxidase J165_03040 PF01479 S4 domain J165_03041 PF00043 Glutathione S-transferase, C-terminal domain J165_03041 PF13417 Glutathione S-transferase, N-terminal domain J165_03042 PF08279 HTH domain J165_03042 PF13280 J165_03042 J165_03043 PF01554 MatE J165_03044 PF01245 Ribosomal protein L19 J165_03045 PF01746 tRNA (Guanine-1)-methyltransferase J165_03046 PF01782 RimM N-terminal domain J165_03046 PF05239 PRC-barrel domain J165_03047 PF00886 Ribosomal protein S16 J165_03048 PF01063 Aminotransferase class IV J165_03049 PF03060 Nitronate monooxygenase J165_03050 PF00448 SRP54-type protein, GTPase domain J165_03050 PF02881 SRP54-type protein, helical bundle domain J165_03050 PF02978 Signal peptide binding domain J165_03051 PF01578 J165_03051 J165_03052 PF01263 Aldose 1-epimerase J165_03053 PF06964 Alpha-L-arabinofuranosidase C-terminus J165_03054 PF00722 Glycosyl hydrolases family 16 J165_03055 PF00072 Response regulator receiver domain J165_03056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03056 PF13426 PAS domain J165_03057 PF00072 Response regulator receiver domain J165_03057 PF00512 His Kinase A (phospho-acceptor) domain J165_03057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03057 PF13185 GAF domain J165_03058 PF01739 CheR methyltransferase, SAM binding domain J165_03058 PF03705 CheR methyltransferase, all-alpha domain J165_03059 PF01339 CheB methylesterase J165_03060 PF00072 Response regulator receiver domain J165_03060 PF00512 His Kinase A (phospho-acceptor) domain J165_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03061 PF07237 Protein of unknown function (DUF1428) J165_03062 PF00085 Thioredoxin J165_03063 PF00593 TonB dependent receptor J165_03063 PF07715 TonB-dependent Receptor Plug Domain J165_03064 PF04616 Glycosyl hydrolases family 43 J165_03065 PF00072 Response regulator receiver domain J165_03065 PF00512 His Kinase A (phospho-acceptor) domain J165_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03065 PF08448 PAS fold J165_03066 PF00512 His Kinase A (phospho-acceptor) domain J165_03066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03067 PF07228 Stage II sporulation protein E (SpoIIE) J165_03067 PF13581 Histidine kinase-like ATPase domain J165_03068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03070 PF01740 STAS domain J165_03070 PF14361 J165_03070 J165_03072 PF00183 Hsp90 protein J165_03072 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03073 PF12833 Helix-turn-helix domain J165_03074 PF00486 Transcriptional regulatory protein, C terminal J165_03075 PF05656 J165_03075 J165_03076 PF13481 AAA domain J165_03076 PF13541 Subunit ChlI of Mg-chelatase J165_03077 PF05299 M61 glycyl aminopeptidase J165_03077 PF07720 Tetratricopeptide repeat J165_03078 PF03626 J165_03078 J165_03079 PF00510 Cytochrome c oxidase subunit III J165_03080 PF00115 Cytochrome C and Quinol oxidase polypeptide I J165_03081 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J165_03081 PF06481 COX Aromatic Rich Motif J165_03083 PF02401 LytB protein J165_03084 PF01252 J165_03084 J165_03085 PF00133 tRNA synthetases class I (I, L, M and V) J165_03085 PF06827 Zinc finger found in FPG and IleRS J165_03085 PF08264 Anticodon-binding domain of tRNA J165_03086 PF01687 Riboflavin kinase J165_03086 PF06574 FAD synthetase J165_03087 PF03023 J165_03087 J165_03088 PF01649 Ribosomal protein S20 J165_03089 PF01018 GTP1/OBG J165_03089 PF01926 50S ribosome-binding GTPase J165_03090 PF01016 Ribosomal L27 protein J165_03091 PF00829 Ribosomal prokaryotic L21 protein J165_03092 PF00005 ABC transporter J165_03093 PF13279 Thioesterase-like superfamily J165_03094 PF04314 Protein of unknown function (DUF461) J165_03095 PF00378 Enoyl-CoA hydratase/isomerase family J165_03096 PF13622 Thioesterase-like superfamily J165_03097 PF09413 Domain of unknown function (DUF2007) J165_03100 PF13202 EF hand J165_03100 PF13499 EF-hand domain pair J165_03101 PF04376 J165_03101 J165_03101 PF04377 J165_03101 J165_03102 PF03372 Endonuclease/Exonuclease/phosphatase family J165_03103 PF02222 ATP-grasp domain J165_03104 PF01145 SPFH domain / Band 7 family J165_03107 PF02557 D-alanyl-D-alanine carboxypeptidase J165_03108 PF00730 HhH-GPD superfamily base excision DNA repair protein J165_03109 PF04241 J165_03109 J165_03110 PF10604 Polyketide cyclase / dehydrase and lipid transport J165_03111 PF00072 Response regulator receiver domain J165_03111 PF00196 Bacterial regulatory proteins, luxR family J165_03112 PF07730 Histidine kinase J165_03113 PF00583 Acetyltransferase (GNAT) family J165_03114 PF03775 Septum formation inhibitor MinC, C-terminal domain J165_03114 PF05209 Septum formation inhibitor MinC, N-terminal domain J165_03115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_03116 PF03776 Septum formation topological specificity factor MinE J165_03118 PF00512 His Kinase A (phospho-acceptor) domain J165_03118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03119 PF00072 Response regulator receiver domain J165_03119 PF00486 Transcriptional regulatory protein, C terminal J165_03120 PF13231 J165_03120 J165_03121 PF01569 PAP2 superfamily J165_03122 PF00884 Sulfatase J165_03122 PF08019 J165_03122 J165_03123 PF01401 Angiotensin-converting enzyme J165_03125 PF07690 Major Facilitator Superfamily J165_03128 PF02347 Glycine cleavage system P-protein J165_03129 PF00135 Carboxylesterase family J165_03130 PF00248 Aldo/keto reductase family J165_03131 PF00199 Catalase J165_03131 PF06628 Catalase-related immune-responsive J165_03135 PF14412 J165_03135 J165_03136 PF07791 J165_03136 J165_03137 PF08845 J165_03137 J165_03138 PF13466 STAS domain J165_03139 PF01584 CheW-like domain J165_03139 PF01627 Hpt domain J165_03139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03139 PF02895 Signal transducing histidine kinase, homodimeric domain J165_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03141 PF01584 CheW-like domain J165_03142 PF00072 Response regulator receiver domain J165_03142 PF00563 EAL domain J165_03143 PF01739 CheR methyltransferase, SAM binding domain J165_03143 PF03705 CheR methyltransferase, all-alpha domain J165_03144 PF00072 Response regulator receiver domain J165_03144 PF01339 CheB methylesterase J165_03145 PF13091 PLD-like domain J165_03146 PF01431 Peptidase family M13 J165_03146 PF05649 Peptidase family M13 J165_03148 PF00300 Histidine phosphatase superfamily (branch 1) J165_03149 PF04493 Endonuclease V J165_03151 PF02678 Pirin J165_03151 PF05726 Pirin C-terminal cupin domain J165_03153 PF02566 OsmC-like protein J165_03154 PF02678 Pirin J165_03154 PF05726 Pirin C-terminal cupin domain J165_03155 PF02554 J165_03155 J165_03155 PF13722 J165_03155 J165_03156 PF04328 J165_03156 J165_03157 PF13419 Haloacid dehalogenase-like hydrolase J165_03158 PF12796 Ankyrin repeats (3 copies) J165_03159 PF11187 Protein of unknown function (DUF2974) J165_03160 PF05684 J165_03160 J165_03163 PF12804 MobA-like NTP transferase domain J165_03164 PF02625 XdhC and CoxI family J165_03164 PF13478 XdhC Rossmann domain J165_03165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_03165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J165_03166 PF00941 FAD binding domain in molybdopterin dehydrogenase J165_03166 PF03450 CO dehydrogenase flavoprotein C-terminal domain J165_03167 PF00111 2Fe-2S iron-sulfur cluster binding domain J165_03167 PF01799 [2Fe-2S] binding domain J165_03168 PF00107 Zinc-binding dehydrogenase J165_03168 PF08240 Alcohol dehydrogenase GroES-like domain J165_03169 PF00990 GGDEF domain J165_03169 PF02743 Cache domain J165_03170 PF00436 Single-strand binding protein family J165_03171 PF00348 Polyprenyl synthetase J165_03172 PF01738 Dienelactone hydrolase family J165_03173 PF02875 Mur ligase family, glutamate ligase domain J165_03173 PF08245 Mur ligase middle domain J165_03176 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J165_03176 PF00696 Amino acid kinase family J165_03176 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J165_03177 PF02567 Phenazine biosynthesis-like protein J165_03178 PF02567 Phenazine biosynthesis-like protein J165_03179 PF05433 J165_03179 J165_03180 PF02566 OsmC-like protein J165_03181 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J165_03181 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J165_03182 PF03652 Uncharacterised protein family (UPF0081) J165_03183 PF02622 Uncharacterized ACR, COG1678 J165_03184 PF03352 Methyladenine glycosylase J165_03185 PF01904 Protein of unknown function DUF72 J165_03187 PF03211 Pectate lyase J165_03188 PF00437 Type II/IV secretion system protein J165_03189 PF00437 Type II/IV secretion system protein J165_03190 PF01168 Alanine racemase, N-terminal domain J165_03191 PF03807 NADP oxidoreductase coenzyme F420-dependent J165_03191 PF14748 Pyrroline-5-carboxylate reductase dimerisation J165_03192 PF00216 Bacterial DNA-binding protein J165_03193 PF01551 Peptidase family M23 J165_03194 PF12977 Domain of Unknown Function with PDB structure (DUF3861) J165_03196 PF07273 Protein of unknown function (DUF1439) J165_03197 PF01965 DJ-1/PfpI family J165_03198 PF00856 SET domain J165_03199 PF02082 Transcriptional regulator J165_03200 PF01458 Uncharacterized protein family (UPF0051) J165_03201 PF00005 ABC transporter J165_03202 PF01458 Uncharacterized protein family (UPF0051) J165_03203 PF00266 Aminotransferase class-V J165_03204 PF13673 Acetyltransferase (GNAT) domain J165_03205 PF00355 Rieske [2Fe-2S] domain J165_03206 PF00593 TonB dependent receptor J165_03206 PF07715 TonB-dependent Receptor Plug Domain J165_03207 PF13640 2OG-Fe(II) oxygenase superfamily J165_03208 PF08238 Sel1 repeat J165_03209 PF16357 J165_03209 J165_03210 PF10029 J165_03210 J165_03211 PF10670 J165_03211 J165_03212 PF02424 ApbE family J165_03213 PF00175 Oxidoreductase NAD-binding domain J165_03213 PF00258 Flavodoxin J165_03214 PF13202 EF hand J165_03214 PF13499 EF-hand domain pair J165_03215 PF05962 HutD J165_03216 PF12836 Helix-hairpin-helix motif J165_03217 PF01546 Peptidase family M20/M25/M40 J165_03217 PF07687 Peptidase dimerisation domain J165_03218 PF04226 J165_03218 J165_03219 PF01636 Phosphotransferase enzyme family J165_03220 PF00483 Nucleotidyl transferase J165_03221 PF00308 Bacterial dnaA protein J165_03222 PF01594 J165_03222 J165_03223 PF09839 J165_03223 J165_03224 PF00586 AIR synthase related protein, N-terminal domain J165_03224 PF02769 AIR synthase related protein, C-terminal domain J165_03226 PF00551 Formyl transferase J165_03227 PF11306 Protein of unknown function (DUF3108) J165_03228 PF11306 Protein of unknown function (DUF3108) J165_03230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J165_03231 PF01722 BolA-like protein J165_03232 PF00571 CBS domain J165_03232 PF01380 SIS domain J165_03233 PF08282 haloacid dehalogenase-like hydrolase J165_03234 PF06835 Lipopolysaccharide-assembly, LptC-related J165_03235 PF03968 OstA-like protein J165_03236 PF00005 ABC transporter J165_03236 PF12399 Branched-chain amino acid ATP-binding cassette transporter J165_03237 PF00309 J165_03237 J165_03237 PF04552 Sigma-54, DNA binding domain J165_03237 PF04963 Sigma-54 factor, core binding domain J165_03238 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J165_03239 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J165_03240 PF02603 HPr Serine kinase N terminus J165_03240 PF07475 HPr Serine kinase C-terminal domain J165_03241 PF03668 J165_03241 J165_03242 PF03610 PTS system fructose IIA component J165_03243 PF00381 PTS HPr component phosphorylation site J165_03244 PF00391 PEP-utilising enzyme, mobile domain J165_03244 PF02896 PEP-utilising enzyme, TIM barrel domain J165_03244 PF05524 PEP-utilising enzyme, N-terminal J165_03245 PF00571 CBS domain J165_03245 PF01769 Divalent cation transporter J165_03245 PF03448 MgtE intracellular N domain J165_03246 PF00326 Prolyl oligopeptidase family J165_03247 PF02322 J165_03247 J165_03248 PF01654 J165_03248 J165_03249 PF01244 Membrane dipeptidase (Peptidase family M19) J165_03250 PF00324 Amino acid permease J165_03251 PF00544 Pectate lyase J165_03252 PF00561 alpha/beta hydrolase fold J165_03253 PF00196 Bacterial regulatory proteins, luxR family J165_03253 PF03472 Autoinducer binding domain J165_03254 PF13520 Amino acid permease J165_03255 PF01764 Lipase (class 3) J165_03257 PF13365 Trypsin-like peptidase domain J165_03259 PF12706 Beta-lactamase superfamily domain J165_03260 PF04820 Tryptophan halogenase J165_03261 PF13621 Cupin-like domain J165_03262 PF07277 J165_03262 J165_03263 PF00593 TonB dependent receptor J165_03263 PF07715 TonB-dependent Receptor Plug Domain J165_03264 PF01433 Peptidase family M1 J165_03265 PF00376 MerR family regulatory protein J165_03265 PF09278 MerR, DNA binding J165_03266 PF07690 Major Facilitator Superfamily J165_03268 PF03738 Glutathionylspermidine synthase preATP-grasp J165_03269 PF06693 J165_03269 J165_03270 PF03994 J165_03270 J165_03271 PF10679 J165_03271 J165_03272 PF07885 Ion channel J165_03273 PF04012 J165_03273 J165_03274 PF09938 J165_03274 J165_03275 PF01243 Pyridoxamine 5'-phosphate oxidase J165_03275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J165_03276 PF01202 Shikimate kinase J165_03277 PF01761 3-dehydroquinate synthase J165_03279 PF01208 Uroporphyrinogen decarboxylase (URO-D) J165_03280 PF11747 J165_03280 J165_03281 PF11747 J165_03281 J165_03282 PF11747 J165_03282 J165_03283 PF11747 J165_03283 J165_03285 PF11747 J165_03285 J165_03289 PF08924 Domain of unknown function (DUF1906) J165_03292 PF12833 Helix-turn-helix domain J165_03292 PF14532 Sigma-54 interaction domain J165_03293 PF07690 Major Facilitator Superfamily J165_03294 PF00072 Response regulator receiver domain J165_03294 PF00512 His Kinase A (phospho-acceptor) domain J165_03294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03294 PF07494 Two component regulator propeller J165_03294 PF07495 Y_Y_Y domain J165_03295 PF00072 Response regulator receiver domain J165_03295 PF00512 His Kinase A (phospho-acceptor) domain J165_03295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03295 PF07494 Two component regulator propeller J165_03295 PF07495 Y_Y_Y domain J165_03297 PF00072 Response regulator receiver domain J165_03297 PF00512 His Kinase A (phospho-acceptor) domain J165_03297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03297 PF07494 Two component regulator propeller J165_03297 PF07495 Y_Y_Y domain J165_03298 PF04264 YceI-like domain J165_03299 PF01292 Prokaryotic cytochrome b561 J165_03300 PF04264 YceI-like domain J165_03301 PF05768 Glutaredoxin-like domain (DUF836) J165_03302 PF03313 J165_03302 J165_03302 PF03315 Serine dehydratase beta chain J165_03303 PF00561 alpha/beta hydrolase fold J165_03304 PF00742 Homoserine dehydrogenase J165_03304 PF03447 Homoserine dehydrogenase, NAD binding domain J165_03305 PF01053 Cys/Met metabolism PLP-dependent enzyme J165_03306 PF00561 alpha/beta hydrolase fold J165_03308 PF01551 Peptidase family M23 J165_03309 PF00009 Elongation factor Tu GTP binding domain J165_03309 PF16658 J165_03309 J165_03310 PF03006 J165_03310 J165_03311 PF05170 J165_03311 J165_03312 PF00571 CBS domain J165_03313 PF00535 Glycosyl transferase family 2 J165_03314 PF00912 Transglycosylase J165_03315 PF01430 Hsp33 protein J165_03317 PF00593 TonB dependent receptor J165_03317 PF07715 TonB-dependent Receptor Plug Domain J165_03318 PF13181 Tetratricopeptide repeat J165_03318 PF13469 Sulfotransferase family J165_03319 PF00440 Bacterial regulatory proteins, tetR family J165_03320 PF12146 Putative lysophospholipase J165_03321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J165_03321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03321 PF09317 J165_03321 J165_03322 PF06993 J165_03322 J165_03323 PF07690 Major Facilitator Superfamily J165_03324 PF00144 Beta-lactamase J165_03326 PF01597 Glycine cleavage H-protein J165_03327 PF01571 Aminomethyltransferase folate-binding domain J165_03327 PF08669 Glycine cleavage T-protein C-terminal barrel domain J165_03328 PF01957 NfeD-like C-terminal, partner-binding J165_03329 PF16200 J165_03329 J165_03330 PF02694 J165_03330 J165_03331 PF03819 MazG nucleotide pyrophosphohydrolase domain J165_03332 PF00459 Inositol monophosphatase family J165_03333 PF00293 NUDIX domain J165_03334 PF00202 Aminotransferase class-III J165_03335 PF04452 RNA methyltransferase J165_03336 PF02685 Glucokinase J165_03337 PF00593 TonB dependent receptor J165_03337 PF07715 TonB-dependent Receptor Plug Domain J165_03338 PF01120 Alpha-L-fucosidase J165_03338 PF16757 J165_03338 J165_03339 PF00704 Glycosyl hydrolases family 18 J165_03340 PF00728 Glycosyl hydrolase family 20, catalytic domain J165_03340 PF02838 Glycosyl hydrolase family 20, domain 2 J165_03340 PF13290 J165_03340 J165_03341 PF00703 Glycosyl hydrolases family 2 J165_03342 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_03342 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_03342 PF07691 PA14 domain J165_03342 PF14310 Fibronectin type III-like domain J165_03343 PF00593 TonB dependent receptor J165_03343 PF07715 TonB-dependent Receptor Plug Domain J165_03343 PF13620 Carboxypeptidase regulatory-like domain J165_03344 PF01301 Glycosyl hydrolases family 35 J165_03345 PF13520 Amino acid permease J165_03346 PF00294 pfkB family carbohydrate kinase J165_03347 PF02056 Family 4 glycosyl hydrolase J165_03347 PF11975 Family 4 glycosyl hydrolase C-terminal domain J165_03348 PF06824 Protein of unknown function (DUF1237) J165_03349 PF07971 Glycosyl hydrolase family 92 J165_03350 PF01301 Glycosyl hydrolases family 35 J165_03353 PF11747 J165_03353 J165_03354 PF13088 BNR repeat-like domain J165_03355 PF13855 Leucine rich repeat J165_03356 PF03932 CutC family J165_03357 PF01112 Asparaginase J165_03358 PF13302 Acetyltransferase (GNAT) domain J165_03359 PF01584 CheW-like domain J165_03360 PF01339 CheB methylesterase J165_03361 PF00072 Response regulator receiver domain J165_03361 PF01584 CheW-like domain J165_03361 PF01627 Hpt domain J165_03361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03361 PF02895 Signal transducing histidine kinase, homodimeric domain J165_03362 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03363 PF01584 CheW-like domain J165_03364 PF00072 Response regulator receiver domain J165_03365 PF00072 Response regulator receiver domain J165_03366 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J165_03366 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J165_03367 PF03544 Gram-negative bacterial TonB protein C-terminal J165_03368 PF03747 ADP-ribosylglycohydrolase J165_03369 PF00814 Glycoprotease family J165_03370 PF13307 Helicase C-terminal domain J165_03372 PF00905 Penicillin binding protein transpeptidase domain J165_03372 PF00912 Transglycosylase J165_03372 PF14814 Bifunctional transglycosylase second domain J165_03373 PF00535 Glycosyl transferase family 2 J165_03373 PF13692 Glycosyl transferases group 1 J165_03375 PF02824 TGS domain J165_03375 PF04607 Region found in RelA / SpoT proteins J165_03375 PF13291 ACT domain J165_03375 PF13328 HD domain J165_03376 PF12706 Beta-lactamase superfamily domain J165_03377 PF03070 TENA/THI-4/PQQC family J165_03378 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J165_03379 PF04055 Radical SAM superfamily J165_03379 PF13186 Iron-sulfur cluster-binding domain J165_03379 PF13353 4Fe-4S single cluster domain J165_03381 PF10142 PhoPQ-activated pathogenicity-related protein J165_03382 PF02685 Glucokinase J165_03383 PF00593 TonB dependent receptor J165_03383 PF07715 TonB-dependent Receptor Plug Domain J165_03384 PF00270 DEAD/DEAH box helicase J165_03384 PF00271 Helicase conserved C-terminal domain J165_03384 PF04408 Helicase associated domain (HA2) J165_03384 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J165_03384 PF11898 J165_03384 J165_03385 PF00210 Ferritin-like domain J165_03386 PF00270 DEAD/DEAH box helicase J165_03386 PF00271 Helicase conserved C-terminal domain J165_03386 PF00570 HRDC domain J165_03386 PF09382 RQC domain J165_03386 PF16124 J165_03386 J165_03388 PF00072 Response regulator receiver domain J165_03391 PF01479 S4 domain J165_03393 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03393 PF00672 HAMP domain J165_03393 PF12729 J165_03393 J165_03394 PF01810 J165_03394 J165_03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03395 PF03466 LysR substrate binding domain J165_03396 PF00072 Response regulator receiver domain J165_03397 PF07536 J165_03397 J165_03397 PF08448 PAS fold J165_03398 PF06508 Queuosine biosynthesis protein QueC J165_03400 PF04055 Radical SAM superfamily J165_03400 PF13394 4Fe-4S single cluster domain J165_03401 PF13525 Outer membrane lipoprotein J165_03401 PF16331 J165_03401 J165_03402 PF00691 OmpA family J165_03403 PF04052 TolB amino-terminal domain J165_03403 PF07676 WD40-like Beta Propeller Repeat J165_03404 PF13103 TonB C terminal J165_03405 PF02472 Biopolymer transport protein ExbD/TolR J165_03406 PF01618 J165_03406 J165_03407 PF03061 Thioesterase superfamily J165_03408 PF05491 Holliday junction DNA helicase ruvB C-terminus J165_03408 PF05496 Holliday junction DNA helicase ruvB N-terminus J165_03410 PF02705 J165_03410 J165_03411 PF01330 RuvA N terminal domain J165_03411 PF07499 RuvA, C-terminal domain J165_03411 PF14520 Helix-hairpin-helix domain J165_03412 PF02075 Crossover junction endodeoxyribonuclease RuvC J165_03413 PF01709 Transcriptional regulator J165_03415 PF00583 Acetyltransferase (GNAT) family J165_03416 PF00152 tRNA synthetases class II (D, K and N) J165_03416 PF01336 OB-fold nucleic acid binding domain J165_03416 PF02938 GAD domain J165_03417 PF11218 J165_03417 J165_03418 PF09723 J165_03418 J165_03419 PF07690 Major Facilitator Superfamily J165_03420 PF00593 TonB dependent receptor J165_03420 PF07715 TonB-dependent Receptor Plug Domain J165_03422 PF04185 Phosphoesterase family J165_03422 PF05506 J165_03422 J165_03424 PF13354 Beta-lactamase enzyme family J165_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03425 PF03466 LysR substrate binding domain J165_03426 PF14317 J165_03426 J165_03427 PF00005 ABC transporter J165_03427 PF12848 ABC transporter J165_03427 PF16326 J165_03427 J165_03428 PF00593 TonB dependent receptor J165_03428 PF07715 TonB-dependent Receptor Plug Domain J165_03429 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_03430 PF00593 TonB dependent receptor J165_03430 PF07715 TonB-dependent Receptor Plug Domain J165_03431 PF00593 TonB dependent receptor J165_03431 PF07715 TonB-dependent Receptor Plug Domain J165_03432 PF00067 Cytochrome P450 J165_03433 PF00999 Sodium/hydrogen exchanger family J165_03433 PF02254 TrkA-N domain J165_03437 PF03328 HpcH/HpaI aldolase/citrate lyase family J165_03438 PF00593 TonB dependent receptor J165_03438 PF07715 TonB-dependent Receptor Plug Domain J165_03439 PF02655 ATP-grasp domain J165_03440 PF04183 IucA / IucC family J165_03440 PF06276 Ferric iron reductase FhuF-like transporter J165_03441 PF07690 Major Facilitator Superfamily J165_03442 PF04183 IucA / IucC family J165_03442 PF06276 Ferric iron reductase FhuF-like transporter J165_03443 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J165_03443 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J165_03446 PF02654 J165_03446 J165_03447 PF00300 Histidine phosphatase superfamily (branch 1) J165_03448 PF02277 Phosphoribosyltransferase J165_03449 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J165_03450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J165_03450 PF07685 CobB/CobQ-like glutamine amidotransferase domain J165_03451 PF00155 Aminotransferase class I and II J165_03453 PF03186 J165_03453 J165_03454 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J165_03454 PF12557 Cob(I)alamin adenosyltransferase N terminal J165_03457 PF00593 TonB dependent receptor J165_03457 PF07715 TonB-dependent Receptor Plug Domain J165_03459 PF00004 ATPase family associated with various cellular activities (AAA) J165_03459 PF02861 Clp amino terminal domain J165_03459 PF07724 AAA domain (Cdc48 subfamily) J165_03459 PF10431 C-terminal, D2-small domain, of ClpB protein J165_03460 PF00005 ABC transporter J165_03461 PF00528 Binding-protein-dependent transport system inner membrane component J165_03462 PF09084 NMT1/THI5 like J165_03463 PF00248 Aldo/keto reductase family J165_03464 PF00296 Luciferase-like monooxygenase J165_03465 PF00593 TonB dependent receptor J165_03465 PF07715 TonB-dependent Receptor Plug Domain J165_03466 PF01541 GIY-YIG catalytic domain J165_03467 PF14497 Glutathione S-transferase, C-terminal domain J165_03468 PF11219 J165_03468 J165_03469 PF07007 Protein of unknown function (DUF1311) J165_03472 PF12098 J165_03472 J165_03473 PF00593 TonB dependent receptor J165_03473 PF07715 TonB-dependent Receptor Plug Domain J165_03474 PF02358 Trehalose-phosphatase J165_03475 PF00723 Glycosyl hydrolases family 15 J165_03476 PF00982 Glycosyltransferase family 20 J165_03477 PF01011 PQQ enzyme repeat J165_03477 PF13360 PQQ-like domain J165_03478 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03479 PF04134 J165_03479 J165_03480 PF13761 J165_03480 J165_03481 PF02578 Multi-copper polyphenol oxidoreductase laccase J165_03482 PF00849 RNA pseudouridylate synthase J165_03483 PF13525 Outer membrane lipoprotein J165_03485 PF00795 Carbon-nitrogen hydrolase J165_03485 PF02540 NAD synthase J165_03486 PF04480 Protein of unknown function (DUF559) J165_03487 PF01527 Transposase J165_03488 PF00665 Integrase core domain J165_03488 PF13276 J165_03488 J165_03491 PF01471 Putative peptidoglycan binding domain J165_03491 PF13406 Transglycosylase SLT domain J165_03492 PF01526 J165_03492 J165_03492 PF13700 J165_03492 J165_03496 PF11740 J165_03496 J165_03499 PF00665 Integrase core domain J165_03500 PF01695 IstB-like ATP binding protein J165_03506 PF01527 Transposase J165_03507 PF00665 Integrase core domain J165_03507 PF13276 J165_03507 J165_03512 PF12811 J165_03512 J165_03513 PF00180 Isocitrate/isopropylmalate dehydrogenase J165_03514 PF02627 Carboxymuconolactone decarboxylase family J165_03515 PF00462 Glutaredoxin J165_03516 PF01435 Peptidase family M48 J165_03517 PF00072 Response regulator receiver domain J165_03517 PF00486 Transcriptional regulatory protein, C terminal J165_03518 PF00512 His Kinase A (phospho-acceptor) domain J165_03518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03518 PF11808 J165_03518 J165_03519 PF02503 Polyphosphate kinase middle domain J165_03519 PF13089 Polyphosphate kinase N-terminal domain J165_03519 PF13090 Polyphosphate kinase C-terminal domain J165_03520 PF02541 Ppx/GppA phosphatase family J165_03521 PF00534 Glycosyl transferases group 1 J165_03521 PF13439 Glycosyltransferase Family 4 J165_03522 PF01569 PAP2 superfamily J165_03524 PF00149 Calcineurin-like phosphoesterase J165_03526 PF13688 Metallo-peptidase family M12 J165_03528 PF04305 J165_03528 J165_03529 PF13522 Glutamine amidotransferase domain J165_03530 PF02674 J165_03530 J165_03531 PF05036 Sporulation related domain J165_03532 PF08245 Mur ligase middle domain J165_03533 PF00300 Histidine phosphatase superfamily (branch 1) J165_03534 PF10459 Peptidase S46 J165_03535 PF10459 Peptidase S46 J165_03536 PF04185 Phosphoesterase family J165_03536 PF05506 J165_03536 J165_03537 PF00593 TonB dependent receptor J165_03537 PF07715 TonB-dependent Receptor Plug Domain J165_03538 PF00107 Zinc-binding dehydrogenase J165_03538 PF08240 Alcohol dehydrogenase GroES-like domain J165_03539 PF09694 J165_03539 J165_03540 PF00005 ABC transporter J165_03540 PF12857 J165_03540 J165_03541 PF00528 Binding-protein-dependent transport system inner membrane component J165_03542 PF00528 Binding-protein-dependent transport system inner membrane component J165_03543 PF13531 Bacterial extracellular solute-binding protein J165_03544 PF00155 Aminotransferase class I and II J165_03546 PF00849 RNA pseudouridylate synthase J165_03546 PF01479 S4 domain J165_03548 PF00691 OmpA family J165_03548 PF13505 Outer membrane protein beta-barrel domain J165_03549 PF08240 Alcohol dehydrogenase GroES-like domain J165_03549 PF13602 Zinc-binding dehydrogenase J165_03550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J165_03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_03551 PF07486 Cell Wall Hydrolase J165_03552 PF00043 Glutathione S-transferase, C-terminal domain J165_03552 PF02798 Glutathione S-transferase, N-terminal domain J165_03553 PF00056 lactate/malate dehydrogenase, NAD binding domain J165_03553 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J165_03554 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J165_03555 PF00009 Elongation factor Tu GTP binding domain J165_03555 PF00679 Elongation factor G C-terminus J165_03555 PF03144 Elongation factor Tu domain 2 J165_03556 PF09900 J165_03556 J165_03557 PF01425 Amidase J165_03558 PF00924 Mechanosensitive ion channel J165_03559 PF01474 Class-II DAHP synthetase family J165_03560 PF00593 TonB dependent receptor J165_03560 PF07715 TonB-dependent Receptor Plug Domain J165_03561 PF02600 Disulfide bond formation protein DsbB J165_03562 PF01196 Ribosomal protein L17 J165_03563 PF01000 RNA polymerase Rpb3/RpoA insert domain J165_03563 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J165_03563 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J165_03564 PF00163 Ribosomal protein S4/S9 N-terminal domain J165_03564 PF01479 S4 domain J165_03565 PF00411 Ribosomal protein S11 J165_03566 PF00416 Ribosomal protein S13/S18 J165_03567 PF00344 SecY translocase J165_03568 PF00828 Ribosomal protein L18e/L15 J165_03569 PF00327 Ribosomal protein L30p/L7e J165_03570 PF00333 Ribosomal protein S5, N-terminal domain J165_03570 PF03719 Ribosomal protein S5, C-terminal domain J165_03571 PF00861 Ribosomal L18p/L5e family J165_03572 PF00347 Ribosomal protein L6 J165_03573 PF00410 Ribosomal protein S8 J165_03574 PF00253 Ribosomal protein S14p/S29e J165_03575 PF00281 Ribosomal protein L5 J165_03575 PF00673 ribosomal L5P family C-terminus J165_03576 PF00467 KOW motif J165_03576 PF17136 J165_03576 J165_03577 PF00238 Ribosomal protein L14p/L23e J165_03578 PF00366 Ribosomal protein S17 J165_03579 PF00831 Ribosomal L29 protein J165_03580 PF00252 Ribosomal protein L16p/L10e J165_03581 PF00189 Ribosomal protein S3, C-terminal domain J165_03581 PF07650 KH domain J165_03582 PF00237 Ribosomal protein L22p/L17e J165_03583 PF00203 Ribosomal protein S19 J165_03584 PF00181 Ribosomal Proteins L2, RNA binding domain J165_03584 PF03947 Ribosomal Proteins L2, C-terminal domain J165_03585 PF00276 Ribosomal protein L23 J165_03586 PF00573 Ribosomal protein L4/L1 family J165_03587 PF00297 Ribosomal protein L3 J165_03588 PF00338 Ribosomal protein S10p/S20e J165_03589 PF00009 Elongation factor Tu GTP binding domain J165_03589 PF03143 Elongation factor Tu C-terminal domain J165_03589 PF03144 Elongation factor Tu domain 2 J165_03590 PF00009 Elongation factor Tu GTP binding domain J165_03590 PF00679 Elongation factor G C-terminus J165_03590 PF03144 Elongation factor Tu domain 2 J165_03590 PF03764 Elongation factor G, domain IV J165_03590 PF14492 Elongation Factor G, domain II J165_03591 PF00177 Ribosomal protein S7p/S5e J165_03592 PF00164 Ribosomal protein S12/S23 J165_03593 PF00623 RNA polymerase Rpb1, domain 2 J165_03593 PF04983 RNA polymerase Rpb1, domain 3 J165_03593 PF04997 RNA polymerase Rpb1, domain 1 J165_03593 PF04998 RNA polymerase Rpb1, domain 5 J165_03593 PF05000 RNA polymerase Rpb1, domain 4 J165_03594 PF00562 RNA polymerase Rpb2, domain 6 J165_03594 PF04560 RNA polymerase Rpb2, domain 7 J165_03594 PF04561 RNA polymerase Rpb2, domain 2 J165_03594 PF04563 RNA polymerase beta subunit J165_03594 PF04565 RNA polymerase Rpb2, domain 3 J165_03594 PF10385 RNA polymerase beta subunit external 1 domain J165_03596 PF00542 Ribosomal protein L7/L12 C-terminal domain J165_03596 PF16320 J165_03596 J165_03597 PF00466 Ribosomal protein L10 J165_03598 PF00687 Ribosomal protein L1p/L10e family J165_03599 PF00298 Ribosomal protein L11, RNA binding domain J165_03599 PF03946 Ribosomal protein L11, N-terminal domain J165_03600 PF00467 KOW motif J165_03600 PF02357 Transcription termination factor nusG J165_03601 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J165_03603 PF00009 Elongation factor Tu GTP binding domain J165_03603 PF03143 Elongation factor Tu C-terminal domain J165_03603 PF03144 Elongation factor Tu domain 2 J165_03607 PF01926 50S ribosome-binding GTPase J165_03607 PF06071 Protein of unknown function (DUF933) J165_03608 PF01195 Peptidyl-tRNA hydrolase J165_03609 PF01386 Ribosomal L25p family J165_03609 PF14693 Ribosomal protein TL5, C-terminal domain J165_03610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J165_03610 PF14572 Phosphoribosyl synthetase-associated domain J165_03612 PF00288 GHMP kinases N terminal domain J165_03612 PF08544 GHMP kinases C terminal J165_03613 PF03550 Outer membrane lipoprotein LolB J165_03614 PF13429 Tetratricopeptide repeat J165_03615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J165_03615 PF01488 Shikimate / quinate 5-dehydrogenase J165_03615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J165_03616 PF00472 RF-1 domain J165_03616 PF03462 PCRF domain J165_03617 PF13844 Glycosyl transferase family 41 J165_03617 PF14559 Tetratricopeptide repeat J165_03618 PF00994 Probable molybdopterin binding domain J165_03619 PF03976 Polyphosphate kinase 2 (PPK2) J165_03621 PF00708 Acylphosphatase J165_03622 PF00578 AhpC/TSA family J165_03623 PF03631 J165_03623 J165_03624 PF03358 NADPH-dependent FMN reductase J165_03625 PF09842 J165_03625 J165_03626 PF17189 J165_03626 J165_03627 PF02055 O-Glycosyl hydrolase family 30 J165_03628 PF00710 Asparaginase J165_03629 PF04073 Aminoacyl-tRNA editing domain J165_03630 PF00082 Subtilase family J165_03630 PF04151 Bacterial pre-peptidase C-terminal domain J165_03631 PF00082 Subtilase family J165_03632 PF00082 Subtilase family J165_03632 PF04151 Bacterial pre-peptidase C-terminal domain J165_03633 PF01063 Aminotransferase class IV J165_03634 PF01883 Domain of unknown function DUF59 J165_03636 PF02233 NAD(P) transhydrogenase beta subunit J165_03637 PF12769 Domain of unknown function (DUF3814) J165_03638 PF04542 Sigma-70 region 2 J165_03638 PF08281 Sigma-70, region 4 J165_03640 PF11304 J165_03640 J165_03641 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J165_03641 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J165_03642 PF00440 Bacterial regulatory proteins, tetR family J165_03642 PF13305 WHG domain J165_03643 PF12146 Putative lysophospholipase J165_03644 PF07793 J165_03644 J165_03645 PF07793 J165_03645 J165_03646 PF00881 Nitroreductase family J165_03647 PF01367 5'-3' exonuclease, C-terminal SAM fold J165_03647 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J165_03648 PF00293 NUDIX domain J165_03649 PF05013 N-formylglutamate amidohydrolase J165_03650 PF00561 alpha/beta hydrolase fold J165_03651 PF05175 Methyltransferase small domain J165_03652 PF00578 AhpC/TSA family J165_03652 PF10417 C-terminal domain of 1-Cys peroxiredoxin J165_03653 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_03653 PF13192 Thioredoxin domain J165_03654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03654 PF03466 LysR substrate binding domain J165_03655 PF01272 Transcription elongation factor, GreA/GreB, C-term J165_03655 PF14760 Rnk N-terminus J165_03656 PF00923 Transaldolase J165_03657 PF01965 DJ-1/PfpI family J165_03658 PF01625 Peptide methionine sulfoxide reductase J165_03659 PF08332 Calcium/calmodulin dependent protein kinase II Association J165_03660 PF00196 Bacterial regulatory proteins, luxR family J165_03661 PF00072 Response regulator receiver domain J165_03661 PF00512 His Kinase A (phospho-acceptor) domain J165_03661 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03661 PF05227 CHASE3 domain J165_03662 PF00072 Response regulator receiver domain J165_03663 PF09413 Domain of unknown function (DUF2007) J165_03664 PF13409 Glutathione S-transferase, N-terminal domain J165_03665 PF00749 tRNA synthetases class I (E and Q), catalytic domain J165_03665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J165_03668 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J165_03669 PF01728 FtsJ-like methyltransferase J165_03670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03671 PF08450 SMP-30/Gluconolaconase/LRE-like region J165_03673 PF13202 EF hand J165_03674 PF12802 MarR family J165_03675 PF00378 Enoyl-CoA hydratase/isomerase family J165_03676 PF00171 Aldehyde dehydrogenase family J165_03677 PF00501 AMP-binding enzyme J165_03677 PF13193 AMP-binding enzyme C-terminal domain J165_03678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03678 PF03466 LysR substrate binding domain J165_03679 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J165_03680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J165_03681 PF00392 Bacterial regulatory proteins, gntR family J165_03681 PF07729 FCD domain J165_03682 PF13557 J165_03682 J165_03683 PF13577 SnoaL-like domain J165_03684 PF12697 Alpha/beta hydrolase family J165_03685 PF01494 FAD binding domain J165_03686 PF01494 FAD binding domain J165_03688 PF01923 Cobalamin adenosyltransferase J165_03689 PF00850 Histone deacetylase domain J165_03690 PF01453 D-mannose binding lectin J165_03691 PF00850 Histone deacetylase domain J165_03692 PF03968 OstA-like protein J165_03692 PF04453 Organic solvent tolerance protein J165_03693 PF00639 PPIC-type PPIASE domain J165_03693 PF09312 SurA N-terminal domain J165_03693 PF13616 PPIC-type PPIASE domain J165_03694 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J165_03695 PF00398 Ribosomal RNA adenine dimethylase J165_03696 PF04379 Protein of unknown function (DUF525) J165_03697 PF00149 Calcineurin-like phosphoesterase J165_03698 PF00005 ABC transporter J165_03698 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J165_03699 PF00528 Binding-protein-dependent transport system inner membrane component J165_03700 PF00528 Binding-protein-dependent transport system inner membrane component J165_03701 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J165_03702 PF00296 Luciferase-like monooxygenase J165_03703 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J165_03705 PF00593 TonB dependent receptor J165_03705 PF07715 TonB-dependent Receptor Plug Domain J165_03706 PF03358 NADPH-dependent FMN reductase J165_03707 PF00296 Luciferase-like monooxygenase J165_03708 PF09084 NMT1/THI5 like J165_03709 PF00528 Binding-protein-dependent transport system inner membrane component J165_03710 PF00005 ABC transporter J165_03711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J165_03711 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J165_03712 PF00158 Sigma-54 interaction domain J165_03713 PF00186 Dihydrofolate reductase J165_03715 PF00303 Thymidylate synthase J165_03716 PF01790 J165_03716 J165_03717 PF04536 TLP18 J165_03718 PF04536 TLP18 J165_03719 PF04011 LemA family J165_03720 PF01219 Prokaryotic diacylglycerol kinase J165_03721 PF13472 GDSL-like Lipase/Acylhydrolase family J165_03722 PF00512 His Kinase A (phospho-acceptor) domain J165_03722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03723 PF00072 Response regulator receiver domain J165_03723 PF00486 Transcriptional regulatory protein, C terminal J165_03724 PF13472 GDSL-like Lipase/Acylhydrolase family J165_03725 PF00005 ABC transporter J165_03726 PF02687 J165_03726 J165_03727 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J165_03728 PF13379 NMT1-like family J165_03729 PF00005 ABC transporter J165_03730 PF00528 Binding-protein-dependent transport system inner membrane component J165_03731 PF04342 J165_03731 J165_03734 PF00593 TonB dependent receptor J165_03734 PF07715 TonB-dependent Receptor Plug Domain J165_03735 PF10636 Hemin uptake protein hemP J165_03736 PF00248 Aldo/keto reductase family J165_03737 PF01773 Na+ dependent nucleoside transporter N-terminus J165_03737 PF07662 Na+ dependent nucleoside transporter C-terminus J165_03737 PF07670 Nucleoside recognition J165_03738 PF00294 pfkB family carbohydrate kinase J165_03740 PF08306 Glycosyl hydrolase family 98 J165_03740 PF08307 Glycosyl hydrolase family 98 C-terminal domain J165_03740 PF16990 J165_03740 J165_03741 PF01207 Dihydrouridine synthase (Dus) J165_03742 PF08241 Methyltransferase domain J165_03743 PF04307 J165_03743 J165_03744 PF00438 S-adenosylmethionine synthetase, N-terminal domain J165_03744 PF02772 S-adenosylmethionine synthetase, central domain J165_03744 PF02773 S-adenosylmethionine synthetase, C-terminal domain J165_03745 PF00328 Histidine phosphatase superfamily (branch 2) J165_03746 PF00593 TonB dependent receptor J165_03746 PF07715 TonB-dependent Receptor Plug Domain J165_03748 PF13387 J165_03748 J165_03749 PF00440 Bacterial regulatory proteins, tetR family J165_03750 PF00311 Phosphoenolpyruvate carboxylase J165_03751 PF00326 Prolyl oligopeptidase family J165_03753 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J165_03753 PF05221 S-adenosyl-L-homocysteine hydrolase J165_03754 PF13649 Methyltransferase domain J165_03755 PF00685 Sulfotransferase domain J165_03758 PF11539 Protein of unknown function (DUF3228) J165_03759 PF09831 J165_03759 J165_03760 PF00128 Alpha amylase, catalytic domain J165_03761 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03763 PF00082 Subtilase family J165_03763 PF09286 Pro-kumamolisin, activation domain J165_03764 PF08240 Alcohol dehydrogenase GroES-like domain J165_03764 PF13602 Zinc-binding dehydrogenase J165_03766 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_03767 PF02219 Methylenetetrahydrofolate reductase J165_03769 PF00293 NUDIX domain J165_03769 PF02581 Thiamine monophosphate synthase/TENI J165_03770 PF01043 SecA preprotein cross-linking domain J165_03770 PF02810 SEC-C motif J165_03770 PF07516 SecA Wing and Scaffold domain J165_03770 PF07517 SecA DEAD-like domain J165_03771 PF01551 Peptidase family M23 J165_03772 PF05258 J165_03772 J165_03773 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J165_03774 PF00091 Tubulin/FtsZ family, GTPase domain J165_03774 PF12327 FtsZ family, C-terminal domain J165_03775 PF02491 SHS2 domain inserted in FTSA J165_03775 PF14450 Cell division protein FtsA J165_03776 PF03799 Cell division protein FtsQ J165_03776 PF08478 POTRA domain, FtsQ-type J165_03777 PF01820 D-ala D-ala ligase N-terminus J165_03777 PF07478 D-ala D-ala ligase C-terminus J165_03778 PF01225 Mur ligase family, catalytic domain J165_03778 PF02875 Mur ligase family, glutamate ligase domain J165_03778 PF08245 Mur ligase middle domain J165_03779 PF01225 Mur ligase family, catalytic domain J165_03779 PF03033 Glycosyltransferase family 28 N-terminal domain J165_03779 PF04101 Glycosyltransferase family 28 C-terminal domain J165_03779 PF08245 Mur ligase middle domain J165_03780 PF03033 Glycosyltransferase family 28 N-terminal domain J165_03780 PF04101 Glycosyltransferase family 28 C-terminal domain J165_03781 PF01098 J165_03781 J165_03782 PF00953 Glycosyl transferase family 4 J165_03783 PF01225 Mur ligase family, catalytic domain J165_03783 PF02875 Mur ligase family, glutamate ligase domain J165_03783 PF08245 Mur ligase middle domain J165_03784 PF01225 Mur ligase family, catalytic domain J165_03784 PF02875 Mur ligase family, glutamate ligase domain J165_03784 PF08245 Mur ligase middle domain J165_03785 PF00905 Penicillin binding protein transpeptidase domain J165_03785 PF03717 Penicillin-binding Protein dimerisation domain J165_03786 PF04999 J165_03786 J165_03787 PF01795 MraW methylase family J165_03788 PF02381 MraZ protein J165_03789 PF05742 J165_03789 J165_03790 PF07362 Post-segregation antitoxin CcdA J165_03794 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_03795 PF04348 LppC putative lipoprotein J165_03796 PF02021 Uncharacterised protein family UPF0102 J165_03797 PF04307 J165_03797 J165_03798 PF01565 FAD binding domain J165_03798 PF02913 FAD linked oxidases, C-terminal domain J165_03799 PF07007 Protein of unknown function (DUF1311) J165_03801 PF00072 Response regulator receiver domain J165_03801 PF00486 Transcriptional regulatory protein, C terminal J165_03802 PF00512 His Kinase A (phospho-acceptor) domain J165_03802 PF00582 Universal stress protein family J165_03802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03802 PF02702 Osmosensitive K+ channel His kinase sensor domain J165_03802 PF13493 Domain of unknown function (DUF4118) J165_03803 PF02669 J165_03803 J165_03804 PF00122 E1-E2 ATPase J165_03804 PF00702 haloacid dehalogenase-like hydrolase J165_03805 PF03814 J165_03805 J165_03806 PF09604 J165_03806 J165_03807 PF00646 F-box domain J165_03808 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J165_03808 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J165_03809 PF00586 AIR synthase related protein, N-terminal domain J165_03809 PF02769 AIR synthase related protein, C-terminal domain J165_03810 PF01029 NusB family J165_03811 PF00885 6,7-dimethyl-8-ribityllumazine synthase J165_03812 PF00925 GTP cyclohydrolase II J165_03812 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J165_03813 PF00677 Lumazine binding domain J165_03816 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J165_03816 PF01872 RibD C-terminal domain J165_03817 PF00583 Acetyltransferase (GNAT) family J165_03818 PF03477 ATP cone domain J165_03819 PF00464 Serine hydroxymethyltransferase J165_03820 PF11776 Domain of unknown function (DUF3315) J165_03821 PF00005 ABC transporter J165_03821 PF12848 ABC transporter J165_03823 PF00892 EamA-like transporter family J165_03824 PF02567 Phenazine biosynthesis-like protein J165_03825 PF00155 Aminotransferase class I and II J165_03825 PF00392 Bacterial regulatory proteins, gntR family J165_03826 PF00756 Putative esterase J165_03827 PF04828 Glutathione-dependent formaldehyde-activating enzyme J165_03828 PF00107 Zinc-binding dehydrogenase J165_03828 PF08240 Alcohol dehydrogenase GroES-like domain J165_03829 PF02583 Metal-sensitive transcriptional repressor J165_03831 PF00534 Glycosyl transferases group 1 J165_03832 PF00072 Response regulator receiver domain J165_03832 PF00486 Transcriptional regulatory protein, C terminal J165_03833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03834 PF04107 Glutamate-cysteine ligase family 2(GCS2) J165_03835 PF12833 Helix-turn-helix domain J165_03836 PF00753 Metallo-beta-lactamase superfamily J165_03837 PF01926 50S ribosome-binding GTPase J165_03838 PF00034 Cytochrome c J165_03840 PF13462 Thioredoxin J165_03841 PF01323 DSBA-like thioredoxin domain J165_03842 PF03372 Endonuclease/Exonuclease/phosphatase family J165_03843 PF02028 BCCT family transporter J165_03844 PF00171 Aldehyde dehydrogenase family J165_03845 PF00732 GMC oxidoreductase J165_03845 PF05199 GMC oxidoreductase J165_03846 PF01743 Poly A polymerase head domain J165_03846 PF01966 HD domain J165_03846 PF12627 Probable RNA and SrmB- binding site of polymerase A J165_03847 PF00593 TonB dependent receptor J165_03847 PF07715 TonB-dependent Receptor Plug Domain J165_03848 PF01979 Amidohydrolase family J165_03849 PF01380 SIS domain J165_03850 PF00356 Bacterial regulatory proteins, lacI family J165_03850 PF13377 Periplasmic binding protein-like domain J165_03851 PF07690 Major Facilitator Superfamily J165_03852 PF00392 Bacterial regulatory proteins, gntR family J165_03852 PF07702 UTRA domain J165_03853 PF07786 J165_03853 J165_03855 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain J165_03855 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain J165_03855 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain J165_03856 PF00703 Glycosyl hydrolases family 2 J165_03856 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J165_03856 PF02837 Glycosyl hydrolases family 2, sugar binding domain J165_03856 PF16355 J165_03856 J165_03857 PF00593 TonB dependent receptor J165_03857 PF07715 TonB-dependent Receptor Plug Domain J165_03858 PF01203 J165_03858 J165_03859 PF04612 Type II secretion system (T2SS), protein M J165_03860 PF05134 Type II secretion system (T2SS), protein L J165_03861 PF03934 Type II secretion system (T2SS), protein K J165_03862 PF07963 Prokaryotic N-terminal methylation motif J165_03862 PF11612 Type II secretion system (T2SS), protein J J165_03863 PF02501 Type II secretion system (T2SS), protein I J165_03864 PF07963 Prokaryotic N-terminal methylation motif J165_03864 PF12019 Type II transport protein GspH J165_03865 PF07963 Prokaryotic N-terminal methylation motif J165_03865 PF08334 Type II secretion system (T2SS), protein G J165_03866 PF00482 Type II secretion system (T2SS), protein F J165_03867 PF00437 Type II/IV secretion system protein J165_03868 PF00263 J165_03868 J165_03868 PF03958 Bacterial type II/III secretion system short domain J165_03869 PF11356 Type IV pilus biogenesis J165_03869 PF13180 PDZ domain J165_03870 PF00593 TonB dependent receptor J165_03870 PF07715 TonB-dependent Receptor Plug Domain J165_03872 PF13640 2OG-Fe(II) oxygenase superfamily J165_03873 PF00593 TonB dependent receptor J165_03873 PF07715 TonB-dependent Receptor Plug Domain J165_03875 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase J165_03876 PF13561 Enoyl-(Acyl carrier protein) reductase J165_03877 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J165_03878 PF00072 Response regulator receiver domain J165_03878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03879 PF00072 Response regulator receiver domain J165_03880 PF00512 His Kinase A (phospho-acceptor) domain J165_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03880 PF05227 CHASE3 domain J165_03880 PF13188 PAS domain J165_03881 PF04972 BON domain J165_03882 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J165_03882 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J165_03883 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J165_03883 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J165_03885 PF05433 J165_03885 J165_03886 PF10001 J165_03886 J165_03887 PF01555 DNA methylase J165_03889 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J165_03890 PF00293 NUDIX domain J165_03890 PF01467 Cytidylyltransferase J165_03891 PF03372 Endonuclease/Exonuclease/phosphatase family J165_03892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_03892 PF03466 LysR substrate binding domain J165_03893 PF01925 J165_03893 J165_03894 PF00595 PDZ domain (Also known as DHR or GLGF) J165_03894 PF03572 Peptidase family S41 J165_03894 PF11818 J165_03894 J165_03895 PF04055 Radical SAM superfamily J165_03895 PF16881 J165_03895 J165_03896 PF03099 Biotin/lipoate A/B protein ligase family J165_03897 PF04359 Protein of unknown function (DUF493) J165_03898 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) J165_03899 PF00768 D-alanyl-D-alanine carboxypeptidase J165_03899 PF07943 Penicillin-binding protein 5, C-terminal domain J165_03900 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel J165_03900 PF05036 Sporulation related domain J165_03901 PF13406 Transglycosylase SLT domain J165_03902 PF00295 Glycosyl hydrolases family 28 J165_03903 PF01098 J165_03903 J165_03904 PF00905 Penicillin binding protein transpeptidase domain J165_03904 PF03717 Penicillin-binding Protein dimerisation domain J165_03905 PF04093 J165_03905 J165_03906 PF04085 rod shape-determining protein MreC J165_03907 PF06723 MreB/Mbl protein J165_03908 PF00294 pfkB family carbohydrate kinase J165_03909 PF00158 Sigma-54 interaction domain J165_03909 PF01590 GAF domain J165_03909 PF02954 Bacterial regulatory protein, Fis family J165_03910 PF00593 TonB dependent receptor J165_03910 PF07715 TonB-dependent Receptor Plug Domain J165_03911 PF00107 Zinc-binding dehydrogenase J165_03911 PF08240 Alcohol dehydrogenase GroES-like domain J165_03912 PF10282 Lactonase, 7-bladed beta-propeller J165_03913 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J165_03914 PF00497 Bacterial extracellular solute-binding proteins, family 3 J165_03914 PF12796 Ankyrin repeats (3 copies) J165_03914 PF13857 Ankyrin repeats (many copies) J165_03915 PF13360 PQQ-like domain J165_03915 PF13570 PQQ-like domain J165_03916 PF00702 haloacid dehalogenase-like hydrolase J165_03918 PF01433 Peptidase family M1 J165_03918 PF09127 Leukotriene A4 hydrolase, C-terminal J165_03919 PF00990 GGDEF domain J165_03920 PF01209 ubiE/COQ5 methyltransferase family J165_03921 PF07690 Major Facilitator Superfamily J165_03922 PF16576 J165_03922 J165_03923 PF13673 Acetyltransferase (GNAT) domain J165_03924 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J165_03925 PF00004 ATPase family associated with various cellular activities (AAA) J165_03925 PF07724 AAA domain (Cdc48 subfamily) J165_03925 PF10431 C-terminal, D2-small domain, of ClpB protein J165_03926 PF00227 Proteasome subunit J165_03927 PF00589 Phage integrase family J165_03927 PF02899 Phage integrase, N-terminal SAM-like domain J165_03928 PF04340 Protein of unknown function, DUF484 J165_03929 PF01678 Diaminopimelate epimerase J165_03930 PF13627 J165_03930 J165_03931 PF04304 J165_03931 J165_03932 PF00326 Prolyl oligopeptidase family J165_03932 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J165_03933 PF00155 Aminotransferase class I and II J165_03935 PF00326 Prolyl oligopeptidase family J165_03935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J165_03937 PF08212 Lipocalin-like domain J165_03938 PF08279 HTH domain J165_03938 PF13280 J165_03938 J165_03939 PF04338 Protein of unknown function, DUF481 J165_03940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J165_03940 PF03900 Porphobilinogen deaminase, C-terminal domain J165_03941 PF00072 Response regulator receiver domain J165_03941 PF04397 LytTr DNA-binding domain J165_03942 PF06580 J165_03942 J165_03943 PF02230 Phospholipase/Carboxylesterase J165_03944 PF13632 Glycosyl transferase family group 2 J165_03946 PF02225 PA domain J165_03946 PF04389 Peptidase family M28 J165_03947 PF00990 GGDEF domain J165_03948 PF00916 J165_03948 J165_03948 PF01740 STAS domain J165_03949 PF00150 Cellulase (glycosyl hydrolase family 5) J165_03949 PF00553 Cellulose binding domain J165_03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_03950 PF00672 HAMP domain J165_03950 PF17200 J165_03950 J165_03951 PF00990 GGDEF domain J165_03951 PF01590 GAF domain J165_03951 PF08447 PAS fold J165_03951 PF08448 PAS fold J165_03952 PF00675 Insulinase (Peptidase family M16) J165_03952 PF05193 Peptidase M16 inactive domain J165_03954 PF01590 GAF domain J165_03956 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_03956 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J165_03957 PF01904 Protein of unknown function DUF72 J165_03958 PF01204 Trehalase J165_03959 PF01987 Mitochondrial biogenesis AIM24 J165_03960 PF01544 CorA-like Mg2+ transporter protein J165_03962 PF00324 Amino acid permease J165_03964 PF01695 IstB-like ATP binding protein J165_03965 PF00665 Integrase core domain J165_03965 PF13936 Helix-turn-helix domain J165_03966 PF00497 Bacterial extracellular solute-binding proteins, family 3 J165_03967 PF00892 EamA-like transporter family J165_03968 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J165_03972 PF00990 GGDEF domain J165_03973 PF07759 J165_03973 J165_03974 PF00326 Prolyl oligopeptidase family J165_03974 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J165_03975 PF12823 J165_03975 J165_03976 PF05708 Orthopoxvirus protein of unknown function (DUF830) J165_03978 PF13548 J165_03978 J165_03979 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_03980 PF13409 Glutathione S-transferase, N-terminal domain J165_03980 PF13410 Glutathione S-transferase, C-terminal domain J165_03981 PF01145 SPFH domain / Band 7 family J165_03982 PF14412 J165_03982 J165_03983 PF07791 J165_03983 J165_03985 PF04002 RadC-like JAB domain J165_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_03990 PF08448 PAS fold J165_03991 PF00665 Integrase core domain J165_03991 PF13936 Helix-turn-helix domain J165_03992 PF01695 IstB-like ATP binding protein J165_03997 PF00873 AcrB/AcrD/AcrF family J165_03998 PF16576 J165_03998 J165_03999 PF00009 Elongation factor Tu GTP binding domain J165_03999 PF01583 Adenylylsulphate kinase J165_04000 PF01507 Phosphoadenosine phosphosulfate reductase family J165_04001 PF00175 Oxidoreductase NAD-binding domain J165_04001 PF00258 Flavodoxin J165_04001 PF00667 FAD binding domain J165_04002 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J165_04002 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J165_04003 PF01507 Phosphoadenosine phosphosulfate reductase family J165_04004 PF03929 J165_04004 J165_04005 PF00593 TonB dependent receptor J165_04005 PF07715 TonB-dependent Receptor Plug Domain J165_04007 PF01590 GAF domain J165_04007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04009 PF03466 LysR substrate binding domain J165_04010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J165_04010 PF13241 Putative NAD(P)-binding J165_04011 PF00291 Pyridoxal-phosphate dependent enzyme J165_04012 PF04191 Phospholipid methyltransferase J165_04013 PF01661 Macro domain J165_04014 PF00274 Fructose-bisphosphate aldolase class-I J165_04015 PF00224 Pyruvate kinase, barrel domain J165_04015 PF02887 Pyruvate kinase, alpha/beta domain J165_04016 PF13419 Haloacid dehalogenase-like hydrolase J165_04017 PF00162 Phosphoglycerate kinase J165_04018 PF13163 J165_04018 J165_04019 PF13163 J165_04019 J165_04020 PF10101 J165_04020 J165_04022 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J165_04022 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J165_04023 PF08332 Calcium/calmodulin dependent protein kinase II Association J165_04024 PF03922 OmpW family J165_04025 PF03922 OmpW family J165_04026 PF02265 S1/P1 Nuclease J165_04027 PF00753 Metallo-beta-lactamase superfamily J165_04028 PF13531 Bacterial extracellular solute-binding protein J165_04029 PF00528 Binding-protein-dependent transport system inner membrane component J165_04030 PF00005 ABC transporter J165_04032 PF03544 Gram-negative bacterial TonB protein C-terminal J165_04032 PF05569 BlaR1 peptidase M56 J165_04033 PF03965 Penicillinase repressor J165_04034 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J165_04035 PF16670 J165_04035 J165_04036 PF00593 TonB dependent receptor J165_04036 PF07715 TonB-dependent Receptor Plug Domain J165_04037 PF01471 Putative peptidoglycan binding domain J165_04037 PF03734 L,D-transpeptidase catalytic domain J165_04038 PF01551 Peptidase family M23 J165_04040 PF00593 TonB dependent receptor J165_04040 PF07715 TonB-dependent Receptor Plug Domain J165_04041 PF12146 Putative lysophospholipase J165_04042 PF00456 Transketolase, thiamine diphosphate binding domain J165_04042 PF02779 Transketolase, pyrimidine binding domain J165_04042 PF02780 Transketolase, C-terminal domain J165_04043 PF00375 Sodium:dicarboxylate symporter family J165_04044 PF13584 J165_04044 J165_04045 PF00515 Tetratricopeptide repeat J165_04045 PF13519 von Willebrand factor type A domain J165_04046 PF00092 von Willebrand factor type A domain J165_04047 PF14316 J165_04047 J165_04048 PF01882 J165_04048 J165_04049 PF07726 ATPase family associated with various cellular activities (AAA) J165_04051 PF00263 J165_04051 J165_04051 PF03958 Bacterial type II/III secretion system short domain J165_04051 PF07660 Secretin and TonB N terminus short domain J165_04052 PF04351 Pilus assembly protein, PilP J165_04053 PF04350 Pilus assembly protein, PilO J165_04054 PF05137 J165_04054 J165_04055 PF11104 Type IV pilus assembly protein PilM; J165_04056 PF00905 Penicillin binding protein transpeptidase domain J165_04056 PF00912 Transglycosylase J165_04056 PF17092 J165_04056 J165_04059 PF00285 Citrate synthase J165_04060 PF01197 Ribosomal protein L31 J165_04061 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_04062 PF00270 DEAD/DEAH box helicase J165_04062 PF00271 Helicase conserved C-terminal domain J165_04062 PF17191 J165_04062 J165_04063 PF01042 Endoribonuclease L-PSP J165_04064 PF02824 TGS domain J165_04064 PF04607 Region found in RelA / SpoT proteins J165_04064 PF13291 ACT domain J165_04064 PF13328 HD domain J165_04065 PF01192 RNA polymerase Rpb6 J165_04066 PF00625 Guanylate kinase J165_04067 PF03755 J165_04067 J165_04067 PF08340 J165_04067 J165_04068 PF01138 3' exoribonuclease family, domain 1 J165_04068 PF03725 3' exoribonuclease family, domain 2 J165_04069 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_04070 PF01725 Ham1 family J165_04071 PF04055 Radical SAM superfamily J165_04071 PF06969 HemN C-terminal domain J165_04072 PF07793 J165_04072 J165_04073 PF07238 PilZ domain J165_04074 PF00557 Metallopeptidase family M24 J165_04076 PF00557 Metallopeptidase family M24 J165_04076 PF05195 Aminopeptidase P, N-terminal domain J165_04077 PF03695 Uncharacterised protein family (UPF0149) J165_04079 PF05164 Cell division protein ZapA J165_04081 PF01812 5-formyltetrahydrofolate cyclo-ligase family J165_04082 PF01878 EVE domain J165_04083 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J165_04084 PF02643 Uncharacterized ACR, COG1430 J165_04085 PF13369 J165_04085 J165_04085 PF13371 Tetratricopeptide repeat J165_04086 PF00301 Rubredoxin J165_04087 PF02581 Thiamine monophosphate synthase/TENI J165_04088 PF07715 TonB-dependent Receptor Plug Domain J165_04090 PF00202 Aminotransferase class-III J165_04091 PF00196 Bacterial regulatory proteins, luxR family J165_04091 PF13424 Tetratricopeptide repeat J165_04091 PF13481 AAA domain J165_04092 PF00127 Copper binding proteins, plastocyanin/azurin family J165_04093 PF00155 Aminotransferase class I and II J165_04094 PF01042 Endoribonuclease L-PSP J165_04095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J165_04096 PF01593 Flavin containing amine oxidoreductase J165_04097 PF00593 TonB dependent receptor J165_04097 PF07715 TonB-dependent Receptor Plug Domain J165_04099 PF00202 Aminotransferase class-III J165_04100 PF00520 Ion transport protein J165_04101 PF00106 short chain dehydrogenase J165_04103 PF01569 PAP2 superfamily J165_04103 PF09335 J165_04103 J165_04103 PF14067 J165_04103 J165_04104 PF01062 J165_04104 J165_04105 PF02190 ATP-dependent protease La (LON) domain J165_04106 PF01225 Mur ligase family, catalytic domain J165_04106 PF02875 Mur ligase family, glutamate ligase domain J165_04106 PF08245 Mur ligase middle domain J165_04107 PF00406 Adenylate kinase J165_04108 PF00365 Phosphofructokinase J165_04110 PF03030 Inorganic H+ pyrophosphatase J165_04112 PF00719 Inorganic pyrophosphatase J165_04113 PF08668 HDOD domain J165_04114 PF00593 TonB dependent receptor J165_04114 PF07715 TonB-dependent Receptor Plug Domain J165_04115 PF12833 Helix-turn-helix domain J165_04116 PF00486 Transcriptional regulatory protein, C terminal J165_04116 PF07676 WD40-like Beta Propeller Repeat J165_04117 PF01964 ThiC family J165_04117 PF13667 ThiC-associated domain J165_04119 PF00593 TonB dependent receptor J165_04119 PF07715 TonB-dependent Receptor Plug Domain J165_04120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_04121 PF01019 Gamma-glutamyltranspeptidase J165_04122 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J165_04122 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain J165_04123 PF00205 Thiamine pyrophosphate enzyme, central domain J165_04123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J165_04123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J165_04124 PF13710 ACT domain J165_04125 PF00291 Pyridoxal-phosphate dependent enzyme J165_04126 PF00682 HMGL-like J165_04126 PF08502 LeuA allosteric (dimerisation) domain J165_04127 PF00180 Isocitrate/isopropylmalate dehydrogenase J165_04128 PF00694 Aconitase C-terminal domain J165_04129 PF00330 Aconitase family (aconitate hydratase) J165_04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04130 PF03466 LysR substrate binding domain J165_04131 PF00990 GGDEF domain J165_04131 PF07494 Two component regulator propeller J165_04131 PF07495 Y_Y_Y domain J165_04132 PF00440 Bacterial regulatory proteins, tetR family J165_04132 PF14246 AefR-like transcriptional repressor, C-terminal region J165_04133 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J165_04134 PF02321 Outer membrane efflux protein J165_04135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J165_04136 PF03279 J165_04136 J165_04137 PF04932 J165_04137 J165_04138 PF00534 Glycosyl transferases group 1 J165_04138 PF13439 Glycosyltransferase Family 4 J165_04139 PF10276 Zinc-finger domain J165_04141 PF07971 Glycosyl hydrolase family 92 J165_04142 PF00390 Malic enzyme, N-terminal domain J165_04142 PF01515 Phosphate acetyl/butaryl transferase J165_04142 PF03949 Malic enzyme, NAD binding domain J165_04143 PF00375 Sodium:dicarboxylate symporter family J165_04144 PF07396 Phosphate-selective porin O and P J165_04145 PF00072 Response regulator receiver domain J165_04145 PF00512 His Kinase A (phospho-acceptor) domain J165_04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04145 PF02743 Cache domain J165_04145 PF12860 J165_04145 J165_04146 PF00083 Sugar (and other) transporter J165_04147 PF13531 Bacterial extracellular solute-binding protein J165_04148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04148 PF03466 LysR substrate binding domain J165_04149 PF00248 Aldo/keto reductase family J165_04150 PF12680 SnoaL-like domain J165_04151 PF11512 Agrobacterium tumefaciens protein Atu4866 J165_04153 PF00072 Response regulator receiver domain J165_04153 PF00196 Bacterial regulatory proteins, luxR family J165_04154 PF13531 Bacterial extracellular solute-binding protein J165_04155 PF00512 His Kinase A (phospho-acceptor) domain J165_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04155 PF08521 J165_04155 J165_04156 PF00072 Response regulator receiver domain J165_04156 PF00486 Transcriptional regulatory protein, C terminal J165_04157 PF07396 Phosphate-selective porin O and P J165_04158 PF03600 Citrate transporter J165_04160 PF13561 Enoyl-(Acyl carrier protein) reductase J165_04161 PF00356 Bacterial regulatory proteins, lacI family J165_04161 PF13377 Periplasmic binding protein-like domain J165_04162 PF07690 Major Facilitator Superfamily J165_04163 PF00593 TonB dependent receptor J165_04163 PF07715 TonB-dependent Receptor Plug Domain J165_04164 PF00128 Alpha amylase, catalytic domain J165_04165 PF01965 DJ-1/PfpI family J165_04166 PF08014 J165_04166 J165_04167 PF03193 Protein of unknown function, DUF258 J165_04168 PF00155 Aminotransferase class I and II J165_04169 PF13472 GDSL-like Lipase/Acylhydrolase family J165_04170 PF08242 Methyltransferase domain J165_04171 PF00593 TonB dependent receptor J165_04171 PF07715 TonB-dependent Receptor Plug Domain J165_04172 PF01522 Polysaccharide deacetylase J165_04173 PF00462 Glutaredoxin J165_04173 PF00581 Rhodanese-like domain J165_04175 PF06041 Bacterial protein of unknown function (DUF924) J165_04176 PF01527 Transposase J165_04177 PF13683 J165_04177 J165_04178 PF09284 Rhamnogalacturonase B, N-terminal J165_04178 PF14683 Polysaccharide lyase family 4, domain III J165_04178 PF14686 Polysaccharide lyase family 4, domain II J165_04180 PF01670 Glycosyl hydrolase family 12 J165_04181 PF02645 Uncharacterised protein, DegV family COG1307 J165_04182 PF01327 Polypeptide deformylase J165_04183 PF03960 ArsC family J165_04185 PF02225 PA domain J165_04186 PF05420 J165_04186 J165_04187 PF13432 Tetratricopeptide repeat J165_04187 PF14559 Tetratricopeptide repeat J165_04188 PF01270 Glycosyl hydrolases family 8 J165_04189 PF03170 Bacterial cellulose synthase subunit J165_04190 PF00535 Glycosyl transferase family 2 J165_04190 PF07238 PilZ domain J165_04193 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J165_04196 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_04196 PF13641 Glycosyltransferase like family 2 J165_04198 PF00535 Glycosyl transferase family 2 J165_04199 PF01636 Phosphotransferase enzyme family J165_04200 PF00593 TonB dependent receptor J165_04200 PF07715 TonB-dependent Receptor Plug Domain J165_04201 PF04973 J165_04201 J165_04202 PF00392 Bacterial regulatory proteins, gntR family J165_04202 PF07702 UTRA domain J165_04204 PF00263 J165_04204 J165_04204 PF03958 Bacterial type II/III secretion system short domain J165_04206 PF10741 J165_04206 J165_04207 PF05137 J165_04207 J165_04208 PF03934 Type II secretion system (T2SS), protein K J165_04210 PF07963 Prokaryotic N-terminal methylation motif J165_04211 PF12019 Type II transport protein GspH J165_04212 PF08334 Type II secretion system (T2SS), protein G J165_04213 PF00482 Type II secretion system (T2SS), protein F J165_04214 PF00437 Type II/IV secretion system protein J165_04214 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J165_04215 PF00082 Subtilase family J165_04215 PF04151 Bacterial pre-peptidase C-terminal domain J165_04216 PF05658 Head domain of trimeric autotransporter adhesin J165_04216 PF05662 Coiled stalk of trimeric autotransporter adhesin J165_04216 PF13018 J165_04216 J165_04217 PF00082 Subtilase family J165_04217 PF04151 Bacterial pre-peptidase C-terminal domain J165_04218 PF03895 YadA-like C-terminal region J165_04218 PF05658 Head domain of trimeric autotransporter adhesin J165_04218 PF05662 Coiled stalk of trimeric autotransporter adhesin J165_04219 PF02769 AIR synthase related protein, C-terminal domain J165_04219 PF13507 CobB/CobQ-like glutamine amidotransferase domain J165_04220 PF10411 Disulfide bond isomerase protein N-terminus J165_04220 PF13098 Thioredoxin-like domain J165_04221 PF00589 Phage integrase family J165_04221 PF02899 Phage integrase, N-terminal SAM-like domain J165_04222 PF06271 J165_04222 J165_04224 PF03739 J165_04224 J165_04225 PF03739 J165_04225 J165_04226 PF00883 Cytosol aminopeptidase family, catalytic domain J165_04226 PF02789 Cytosol aminopeptidase family, N-terminal domain J165_04228 PF04364 DNA polymerase III chi subunit, HolC J165_04229 PF00133 tRNA synthetases class I (I, L, M and V) J165_04229 PF08264 Anticodon-binding domain of tRNA J165_04229 PF10458 Valyl tRNA synthetase tRNA binding arm J165_04230 PF00593 TonB dependent receptor J165_04230 PF07715 TonB-dependent Receptor Plug Domain J165_04231 PF01464 Transglycosylase SLT domain J165_04231 PF14718 Soluble lytic murein transglycosylase L domain J165_04232 PF00544 Pectate lyase J165_04233 PF00583 Acetyltransferase (GNAT) family J165_04235 PF01066 CDP-alcohol phosphatidyltransferase J165_04236 PF13511 J165_04236 J165_04237 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J165_04237 PF03129 Anticodon binding domain J165_04237 PF04073 Aminoacyl-tRNA editing domain J165_04238 PF00816 H-NS histone family J165_04239 PF06738 J165_04239 J165_04239 PF12821 J165_04239 J165_04240 PF02405 J165_04240 J165_04241 PF00005 ABC transporter J165_04242 PF02470 J165_04242 J165_04243 PF03886 Protein of unknown function (DUF330) J165_04244 PF13532 2OG-Fe(II) oxygenase superfamily J165_04245 PF01946 Thi4 family J165_04245 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase J165_04246 PF05045 J165_04246 J165_04246 PF14307 J165_04246 J165_04247 PF01144 Coenzyme A transferase J165_04248 PF01144 Coenzyme A transferase J165_04249 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J165_04249 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J165_04249 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J165_04249 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J165_04250 PF00483 Nucleotidyl transferase J165_04250 PF01050 Mannose-6-phosphate isomerase J165_04251 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J165_04251 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J165_04251 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J165_04252 PF04321 RmlD substrate binding domain J165_04253 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J165_04254 PF00483 Nucleotidyl transferase J165_04255 PF16363 J165_04255 J165_04256 PF01012 Electron transfer flavoprotein domain J165_04257 PF00766 Electron transfer flavoprotein FAD-binding domain J165_04257 PF01012 Electron transfer flavoprotein domain J165_04258 PF03706 J165_04258 J165_04259 PF01040 UbiA prenyltransferase family J165_04260 PF01565 FAD binding domain J165_04261 PF00106 short chain dehydrogenase J165_04263 PF01370 NAD dependent epimerase/dehydratase family J165_04264 PF01593 Flavin containing amine oxidoreductase J165_04265 PF04138 J165_04265 J165_04267 PF08241 Methyltransferase domain J165_04268 PF05045 J165_04268 J165_04269 PF14307 J165_04269 J165_04270 PF13578 Methyltransferase domain J165_04271 PF00132 Bacterial transferase hexapeptide (six repeats) J165_04272 PF00005 ABC transporter J165_04272 PF14524 Wzt C-terminal domain J165_04273 PF01061 J165_04273 J165_04274 PF01053 Cys/Met metabolism PLP-dependent enzyme J165_04275 PF00291 Pyridoxal-phosphate dependent enzyme J165_04275 PF00571 CBS domain J165_04276 PF04325 Protein of unknown function (DUF465) J165_04278 PF14346 Domain of unknown function (DUF4398) J165_04279 PF00437 Type II/IV secretion system protein J165_04280 PF13410 Glutathione S-transferase, C-terminal domain J165_04280 PF13417 Glutathione S-transferase, N-terminal domain J165_04281 PF01557 Fumarylacetoacetate (FAA) hydrolase family J165_04282 PF00270 DEAD/DEAH box helicase J165_04282 PF00271 Helicase conserved C-terminal domain J165_04283 PF02225 PA domain J165_04283 PF04253 Transferrin receptor-like dimerisation domain J165_04283 PF04389 Peptidase family M28 J165_04284 PF00593 TonB dependent receptor J165_04284 PF07715 TonB-dependent Receptor Plug Domain J165_04285 PF01242 6-pyruvoyl tetrahydropterin synthase J165_04286 PF09361 J165_04286 J165_04287 PF13500 AAA domain J165_04288 PF13185 GAF domain J165_04289 PF04994 TfoX C-terminal domain J165_04290 PF00756 Putative esterase J165_04291 PF00593 TonB dependent receptor J165_04291 PF07715 TonB-dependent Receptor Plug Domain J165_04292 PF13419 Haloacid dehalogenase-like hydrolase J165_04293 PF00817 impB/mucB/samB family J165_04293 PF11799 impB/mucB/samB family C-terminal domain J165_04294 PF07977 FabA-like domain J165_04295 PF00109 Beta-ketoacyl synthase, N-terminal domain J165_04295 PF02801 Beta-ketoacyl synthase, C-terminal domain J165_04297 PF01432 Peptidase family M3 J165_04298 PF00291 Pyridoxal-phosphate dependent enzyme J165_04300 PF00394 Multicopper oxidase J165_04300 PF07731 Multicopper oxidase J165_04300 PF07732 Multicopper oxidase J165_04301 PF05275 J165_04301 J165_04302 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J165_04304 PF01471 Putative peptidoglycan binding domain J165_04307 PF01380 SIS domain J165_04307 PF13522 Glutamine amidotransferase domain J165_04308 PF13437 HlyD family secretion protein J165_04308 PF13533 Biotin-lipoyl like J165_04309 PF00005 ABC transporter J165_04310 PF02687 J165_04310 J165_04310 PF12704 MacB-like periplasmic core domain J165_04311 PF02687 J165_04311 J165_04311 PF12704 MacB-like periplasmic core domain J165_04313 PF00072 Response regulator receiver domain J165_04313 PF00158 Sigma-54 interaction domain J165_04313 PF02954 Bacterial regulatory protein, Fis family J165_04314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04315 PF00132 Bacterial transferase hexapeptide (six repeats) J165_04315 PF12804 MobA-like NTP transferase domain J165_04315 PF14602 Hexapeptide repeat of succinyl-transferase J165_04316 PF04138 J165_04316 J165_04318 PF01817 Chorismate mutase type II J165_04319 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J165_04319 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J165_04320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04320 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_04321 PF00231 ATP synthase J165_04322 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04322 PF00306 ATP synthase alpha/beta chain, C terminal domain J165_04322 PF02874 ATP synthase alpha/beta family, beta-barrel domain J165_04323 PF00213 ATP synthase delta (OSCP) subunit J165_04324 PF00430 ATP synthase B/B' CF(0) J165_04325 PF00137 ATP synthase subunit C J165_04326 PF00119 ATP synthase A chain J165_04330 PF00364 Biotin-requiring enzyme J165_04330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J165_04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_04332 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J165_04332 PF00364 Biotin-requiring enzyme J165_04332 PF02817 e3 binding domain J165_04333 PF11101 J165_04333 J165_04334 PF03167 Uracil DNA glycosylase superfamily J165_04335 PF03922 OmpW family J165_04338 PF03180 NLPA lipoprotein J165_04339 PF00528 Binding-protein-dependent transport system inner membrane component J165_04340 PF00005 ABC transporter J165_04340 PF09383 NIL domain J165_04341 PF00892 EamA-like transporter family J165_04342 PF04461 Protein of unknown function (DUF520) J165_04344 PF00072 Response regulator receiver domain J165_04344 PF00512 His Kinase A (phospho-acceptor) domain J165_04344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04345 PF12146 Putative lysophospholipase J165_04346 PF07209 J165_04346 J165_04347 PF13561 Enoyl-(Acyl carrier protein) reductase J165_04349 PF13419 Haloacid dehalogenase-like hydrolase J165_04350 PF00849 RNA pseudouridylate synthase J165_04351 PF05175 Methyltransferase small domain J165_04353 PF07995 Glucose / Sorbosone dehydrogenase J165_04354 PF11607 Protein of unknown function (DUF3247) J165_04355 PF00072 Response regulator receiver domain J165_04355 PF00512 His Kinase A (phospho-acceptor) domain J165_04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J165_04355 PF08448 PAS fold J165_04355 PF13426 PAS domain J165_04358 PF11454 J165_04358 J165_04359 PF00842 Alanine racemase, C-terminal domain J165_04359 PF01168 Alanine racemase, N-terminal domain J165_04360 PF01266 FAD dependent oxidoreductase J165_04361 PF01037 AsnC family J165_04361 PF13404 AsnC-type helix-turn-helix domain J165_04363 PF01641 SelR domain J165_04364 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme J165_04365 PF01618 J165_04365 J165_04366 PF00691 OmpA family J165_04366 PF13677 J165_04366 J165_04368 PF13223 J165_04368 J165_04370 PF11730 J165_04370 J165_04371 PF01061 J165_04371 J165_04372 PF00005 ABC transporter J165_04373 PF00999 Sodium/hydrogen exchanger family J165_04374 PF02469 Fasciclin domain J165_04375 PF03167 Uracil DNA glycosylase superfamily J165_04375 PF13566 J165_04375 J165_04376 PF04055 Radical SAM superfamily J165_04377 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J165_04378 PF07681 J165_04378 J165_04379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04379 PF03466 LysR substrate binding domain J165_04380 PF03358 NADPH-dependent FMN reductase J165_04381 PF00248 Aldo/keto reductase family J165_04382 PF00535 Glycosyl transferase family 2 J165_04383 PF01431 Peptidase family M13 J165_04383 PF05649 Peptidase family M13 J165_04384 PF09995 J165_04384 J165_04387 PF13520 Amino acid permease J165_04389 PF00072 Response regulator receiver domain J165_04389 PF04397 LytTr DNA-binding domain J165_04390 PF06580 J165_04390 J165_04391 PF01266 FAD dependent oxidoreductase J165_04393 PF05974 Domain of unknown function (DUF892) J165_04394 PF05067 Manganese containing catalase J165_04397 PF01339 CheB methylesterase J165_04397 PF01739 CheR methyltransferase, SAM binding domain J165_04397 PF03705 CheR methyltransferase, all-alpha domain J165_04397 PF07536 J165_04397 J165_04397 PF08447 PAS fold J165_04397 PF13596 PAS domain J165_04398 PF00072 Response regulator receiver domain J165_04400 PF00072 Response regulator receiver domain J165_04400 PF00158 Sigma-54 interaction domain J165_04400 PF02954 Bacterial regulatory protein, Fis family J165_04402 PF01654 J165_04402 J165_04403 PF02322 J165_04403 J165_04406 PF13561 Enoyl-(Acyl carrier protein) reductase J165_04407 PF01370 NAD dependent epimerase/dehydratase family J165_04408 PF13692 Glycosyl transferases group 1 J165_04409 PF03275 UDP-galactopyranose mutase J165_04409 PF13450 NAD(P)-binding Rossmann-like domain J165_04411 PF00005 ABC transporter J165_04411 PF00664 ABC transporter transmembrane region J165_04412 PF12244 J165_04412 J165_04413 PF13628 J165_04413 J165_04414 PF00107 Zinc-binding dehydrogenase J165_04414 PF08240 Alcohol dehydrogenase GroES-like domain J165_04414 PF13823 Alcohol dehydrogenase GroES-associated J165_04416 PF03692 J165_04416 J165_04419 PF11828 J165_04419 J165_04420 PF05650 J165_04420 J165_04421 PF00691 OmpA family J165_04422 PF11445 J165_04422 J165_04423 PF00593 TonB dependent receptor J165_04423 PF07715 TonB-dependent Receptor Plug Domain J165_04424 PF12040 J165_04424 J165_04425 PF12040 J165_04425 J165_04425 PF12679 J165_04425 J165_04426 PF00005 ABC transporter J165_04427 PF00246 Zinc carboxypeptidase J165_04428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04428 PF03466 LysR substrate binding domain J165_04429 PF01042 Endoribonuclease L-PSP J165_04431 PF12849 PBP superfamily domain J165_04432 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J165_04432 PF00672 HAMP domain J165_04433 PF01223 DNA/RNA non-specific endonuclease J165_04434 PF12697 Alpha/beta hydrolase family J165_04436 PF02525 Flavodoxin-like fold J165_04437 PF03795 YCII-related domain J165_04439 PF07866 Protein of unknown function (DUF1653) J165_04445 PF00557 Metallopeptidase family M24 J165_04446 PF11903 J165_04446 J165_04447 PF05593 J165_04447 J165_04448 PF01695 IstB-like ATP binding protein J165_04449 PF00665 Integrase core domain J165_04449 PF13936 Helix-turn-helix domain J165_04450 PF01527 Transposase J165_04451 PF00665 Integrase core domain J165_04451 PF13276 J165_04451 J165_04454 PF00717 Peptidase S24-like J165_04455 PF00817 impB/mucB/samB family J165_04455 PF11799 impB/mucB/samB family C-terminal domain J165_04455 PF13438 J165_04455 J165_04456 PF07791 J165_04456 J165_04457 PF14412 J165_04457 J165_04459 PF01555 DNA methylase J165_04460 PF04860 Phage portal protein J165_04461 PF03237 Terminase-like family J165_04461 PF06056 Putative ATPase subunit of terminase (gpP-like) J165_04461 PF17289 J165_04461 J165_04462 PF05929 J165_04462 J165_04463 PF05125 J165_04463 J165_04464 PF05944 J165_04464 J165_04465 PF05926 J165_04465 J165_04466 PF05489 Phage Tail Protein X J165_04467 PF16931 J165_04467 J165_04468 PF05449 J165_04468 J165_04471 PF06891 J165_04471 J165_04472 PF05069 J165_04472 J165_04474 PF04865 J165_04474 J165_04475 PF09684 J165_04475 J165_04479 PF04717 Phage-related baseplate assembly protein J165_04480 PF04965 Gene 25-like lysozyme J165_04481 PF04984 Phage tail sheath protein J165_04481 PF17482 J165_04481 J165_04482 PF04985 J165_04482 J165_04483 PF10109 J165_04483 J165_04484 PF06528 J165_04484 J165_04487 PF06995 J165_04487 J165_04488 PF05954 Phage late control gene D protein (GPD) J165_04490 PF04606 J165_04490 J165_04493 PF13155 Toprim-like J165_04494 PF01695 IstB-like ATP binding protein J165_04495 PF00665 Integrase core domain J165_04495 PF13936 Helix-turn-helix domain J165_04511 PF00140 Sigma-70 factor, region 1 J165_04511 PF03979 Sigma-70 factor, region 1 J165_04511 PF04539 Sigma-70 region 3 J165_04511 PF04542 Sigma-70 region 2 J165_04511 PF04545 Sigma-70, region 4 J165_04511 PF04546 Sigma-70, non-essential region J165_04512 PF02580 D-Tyr-tRNA(Tyr) deacylase J165_04513 PF03279 J165_04513 J165_04514 PF13420 Acetyltransferase (GNAT) domain J165_04515 PF00925 GTP cyclohydrolase II J165_04516 PF03703 J165_04516 J165_04517 PF03703 J165_04517 J165_04518 PF02350 UDP-N-acetylglucosamine 2-epimerase J165_04519 PF00535 Glycosyl transferase family 2 J165_04520 PF04932 J165_04520 J165_04521 PF13231 J165_04521 J165_04522 PF01029 NusB family J165_04522 PF01189 NOL1/NOP2/sun family J165_04523 PF00551 Formyl transferase J165_04523 PF02911 Formyl transferase, C-terminal domain J165_04524 PF01327 Polypeptide deformylase J165_04525 PF01476 LysM domain J165_04526 PF02481 DNA recombination-mediator protein A J165_04527 PF04361 J165_04527 J165_04528 PF00114 Pilin (bacterial filament) J165_04528 PF14237 J165_04528 J165_04529 PF06271 J165_04529 J165_04529 PF14237 J165_04529 J165_04530 PF01131 DNA topoisomerase J165_04530 PF01751 Toprim domain J165_04530 PF13368 J165_04530 J165_04531 PF01300 Telomere recombination J165_04534 PF13561 Enoyl-(Acyl carrier protein) reductase J165_04536 PF01343 Peptidase family S49 J165_04537 PF01554 MatE J165_04538 PF12412 J165_04538 J165_04539 PF11304 J165_04539 J165_04541 PF00270 DEAD/DEAH box helicase J165_04541 PF00271 Helicase conserved C-terminal domain J165_04542 PF00043 Glutathione S-transferase, C-terminal domain J165_04542 PF13417 Glutathione S-transferase, N-terminal domain J165_04543 PF01936 NYN domain J165_04543 PF12872 OST-HTH/LOTUS domain J165_04545 PF07992 Pyridine nucleotide-disulphide oxidoreductase J165_04546 PF03458 J165_04546 J165_04547 PF00140 Sigma-70 factor, region 1 J165_04547 PF04542 Sigma-70 region 2 J165_04547 PF04545 Sigma-70, region 4 J165_04548 PF03167 Uracil DNA glycosylase superfamily J165_04549 PF00072 Response regulator receiver domain J165_04551 PF00005 ABC transporter J165_04552 PF00270 DEAD/DEAH box helicase J165_04552 PF00271 Helicase conserved C-terminal domain J165_04552 PF12300 J165_04552 J165_04553 PF00085 Thioredoxin J165_04554 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J165_04554 PF07497 Rho termination factor, RNA-binding domain J165_04554 PF07498 Rho termination factor, N-terminal domain J165_04555 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J165_04556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04556 PF03466 LysR substrate binding domain J165_04558 PF03971 Monomeric isocitrate dehydrogenase J165_04560 PF00270 DEAD/DEAH box helicase J165_04561 PF09704 CRISPR-associated protein (Cas_Cas5) J165_04563 PF09709 J165_04563 J165_04564 PF05107 J165_04564 J165_04565 PF01930 Domain of unknown function DUF83 J165_04566 PF01867 CRISPR associated protein Cas1 J165_04567 PF00665 Integrase core domain J165_04567 PF13936 Helix-turn-helix domain J165_04568 PF01695 IstB-like ATP binding protein J165_04570 PF01476 LysM domain J165_04571 PF14489 QueF-like protein J165_04571 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J165_04572 PF01546 Peptidase family M20/M25/M40 J165_04572 PF07687 Peptidase dimerisation domain J165_04573 PF16576 J165_04573 J165_04574 PF00873 AcrB/AcrD/AcrF family J165_04575 PF00873 AcrB/AcrD/AcrF family J165_04576 PF07063 Domain of unknown function (DUF1338) J165_04579 PF13419 Haloacid dehalogenase-like hydrolase J165_04580 PF13202 EF hand J165_04581 PF13202 EF hand J165_04583 PF14255 J165_04583 J165_04584 PF01427 D-ala-D-ala dipeptidase J165_04585 PF01510 N-acetylmuramoyl-L-alanine amidase J165_04586 PF00877 NlpC/P60 family J165_04586 PF12913 SH3 domain of the SH3b1 type J165_04586 PF12914 SH3 domain of SH3b2 type J165_04587 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J165_04587 PF13378 Enolase C-terminal domain-like J165_04589 PF13520 Amino acid permease J165_04592 PF05360 J165_04592 J165_04593 PF07995 Glucose / Sorbosone dehydrogenase J165_04594 PF00933 Glycosyl hydrolase family 3 N terminal domain J165_04594 PF01915 Glycosyl hydrolase family 3 C-terminal domain J165_04594 PF14310 Fibronectin type III-like domain J165_04595 PF02152 Dihydroneopterin aldolase J165_04596 PF00814 Glycoprotease family J165_04597 PF01165 Ribosomal protein S21 J165_04598 PF09424 Yqey-like protein J165_04599 PF03631 J165_04599 J165_04600 PF01807 CHC2 zinc finger J165_04600 PF08275 DNA primase catalytic core, N-terminal domain J165_04600 PF08278 DNA primase DnaG DnaB-binding J165_04600 PF10410 DnaB-helicase binding domain of primase J165_04600 PF13155 Toprim-like J165_04601 PF13593 SBF-like CPA transporter family (DUF4137) J165_04602 PF13899 Thioredoxin-like J165_04603 PF01040 UbiA prenyltransferase family J165_04604 PF02628 J165_04604 J165_04606 PF02104 J165_04606 J165_04607 PF11137 J165_04607 J165_04608 PF00510 Cytochrome c oxidase subunit III J165_04609 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J165_04611 PF00115 Cytochrome C and Quinol oxidase polypeptide I J165_04613 PF10003 J165_04613 J165_04614 PF00171 Aldehyde dehydrogenase family J165_04614 PF01619 Proline dehydrogenase J165_04614 PF14850 DNA-binding domain of Proline dehydrogenase J165_04622 PF03594 J165_04622 J165_04623 PF00360 Phytochrome region J165_04623 PF01590 GAF domain J165_04623 PF08446 PAS fold J165_04623 PF08448 PAS fold J165_04624 PF01126 Heme oxygenase J165_04625 PF07690 Major Facilitator Superfamily J165_04626 PF01263 Aldose 1-epimerase J165_04626 PF01471 Putative peptidoglycan binding domain J165_04626 PF13406 Transglycosylase SLT domain J165_04628 PF02810 SEC-C motif J165_04629 PF01925 J165_04629 J165_04630 PF13555 P-loop containing region of AAA domain J165_04630 PF13558 Putative exonuclease SbcCD, C subunit J165_04632 PF13835 J165_04632 J165_04633 PF11855 J165_04633 J165_04634 PF01227 GTP cyclohydrolase I J165_04635 PF12802 MarR family J165_04636 PF07869 J165_04636 J165_04637 PF13437 HlyD family secretion protein J165_04637 PF13533 Biotin-lipoyl like J165_04638 PF02321 Outer membrane efflux protein J165_04639 PF04632 J165_04639 J165_04640 PF00083 Sugar (and other) transporter J165_04641 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J165_04642 PF13091 PLD-like domain J165_04645 PF05016 Plasmid stabilisation system protein J165_04646 PF03869 Arc-like DNA binding domain J165_04647 PF01850 PIN domain J165_04648 PF00756 Putative esterase J165_04649 PF09722 J165_04649 J165_04652 PF00849 RNA pseudouridylate synthase J165_04654 PF01527 Transposase J165_04655 PF00665 Integrase core domain J165_04655 PF13276 J165_04655 J165_04656 PF07080 Protein of unknown function (DUF1348) J165_04657 PF01609 Transposase DDE domain J165_04658 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J165_04658 PF00364 Biotin-requiring enzyme J165_04658 PF02626 Allophanate hydrolase subunit 2 J165_04658 PF02682 Allophanate hydrolase subunit 1 J165_04658 PF02785 Biotin carboxylase C-terminal domain J165_04658 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J165_04659 PF01425 Amidase J165_04660 PF01609 Transposase DDE domain J165_04661 PF07080 Protein of unknown function (DUF1348) J165_04663 PF05299 M61 glycyl aminopeptidase J165_04665 PF01156 Inosine-uridine preferring nucleoside hydrolase J165_04666 PF13245 Part of AAA domain J165_04666 PF13538 UvrD-like helicase C-terminal domain J165_04669 PF00580 UvrD/REP helicase N-terminal domain J165_04669 PF12705 PD-(D/E)XK nuclease superfamily J165_04669 PF13361 UvrD-like helicase C-terminal domain J165_04670 PF04257 Exodeoxyribonuclease V, gamma subunit J165_04672 PF00005 ABC transporter J165_04673 PF02405 J165_04673 J165_04674 PF02470 J165_04674 J165_04675 PF05494 Toluene tolerance, Ttg2 J165_04676 PF13466 STAS domain J165_04677 PF04333 J165_04677 J165_04678 PF14534 Domain of unknown function (DUF4440) J165_04679 PF00255 Glutathione peroxidase J165_04681 PF02646 J165_04681 J165_04682 PF08240 Alcohol dehydrogenase GroES-like domain J165_04682 PF13602 Zinc-binding dehydrogenase J165_04683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J165_04683 PF03466 LysR substrate binding domain J165_04685 PF13410 Glutathione S-transferase, C-terminal domain J165_04685 PF13417 Glutathione S-transferase, N-terminal domain J165_04687 PF13520 Amino acid permease J165_04688 PF07971 Glycosyl hydrolase family 92 J165_04689 PF10947 J165_04689 J165_04690 PF00990 GGDEF domain J165_04690 PF01590 GAF domain J165_04690 PF08448 PAS fold J165_04691 PF05651 J165_04691 J165_04691 PF13556 PucR C-terminal helix-turn-helix domain J165_04692 PF02595 Glycerate kinase family J165_04693 PF07690 Major Facilitator Superfamily J165_04694 PF01244 Membrane dipeptidase (Peptidase family M19) J165_04696 PF10672 S-adenosylmethionine-dependent methyltransferase J165_04698 PF03741 J165_04698 J165_04699 PF01694 Rhomboid family J165_04700 PF03009 Glycerophosphoryl diester phosphodiesterase family J165_04701 PF00593 TonB dependent receptor J165_04701 PF07715 TonB-dependent Receptor Plug Domain J165_04702 PF01569 PAP2 superfamily J165_04703 PF01926 50S ribosome-binding GTPase J165_04703 PF10396 GTP-binding protein TrmE N-terminus J165_04703 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE J165_04704 PF00656 Caspase domain J165_04704 PF01522 Polysaccharide deacetylase J165_04704 PF13432 Tetratricopeptide repeat J165_04705 PF02096 60Kd inner membrane protein J165_04705 PF14849 YidC periplasmic domain J165_04706 PF00825 Ribonuclease P J165_04707 PF00468 Ribosomal protein L34