J165_00005 SM00857 Resolvase, N terminal domain J165_00017 SM00857 Resolvase, N terminal domain J165_00029 SM00857 Resolvase, N terminal domain J165_00036 SM00857 Resolvase, N terminal domain J165_00038 SM00670 Large family of predicted nucleotide-binding domains J165_00045 SM00857 Resolvase, N terminal domain J165_00052 SM00470 ParB-like nuclease domain J165_00059 SM00382 ATPases associated with a variety of cellular activities J165_00081 SM00670 Large family of predicted nucleotide-binding domains J165_00083 SM00382 ATPases associated with a variety of cellular activities J165_00083 SM00760 Bacterial dnaA protein helix-turn-helix domain J165_00084 SM00480 DNA polymerase III beta subunit J165_00087 SM00387 Histidine kinase-like ATPases J165_00087 SM00433 TopoisomeraseII J165_00090 SM00028 Tetratricopeptide repeats J165_00097 SM00155 Phospholipase D. Active site motifs. J165_00100 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_00106 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_00106 SM00245 tail specific protease J165_00123 SM00633 Glycosyl hydrolase family 10 J165_00125 SM00633 Glycosyl hydrolase family 10 J165_00128 SM00633 Glycosyl hydrolase family 10 J165_00139 SM00612 J165_00139 J165_00143 SM00758 J165_00143 J165_00143 SM01217 J165_00143 J165_00145 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J165_00148 SM00354 helix_turn _helix lactose operon repressor J165_00162 SM00382 ATPases associated with a variety of cellular activities J165_00164 SM00836 DALR anticodon binding domain J165_00176 SM00564 beta-propeller repeat J165_00182 SM00091 PAS domain J165_00182 SM00387 Histidine kinase-like ATPases J165_00182 SM00388 His Kinase A (phosphoacceptor) domain J165_00182 SM00448 cheY-homologous receiver domain J165_00184 SM00346 helix_turn_helix isocitrate lyase regulation J165_00188 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J165_00198 SM00421 helix_turn_helix, Lux Regulon J165_00198 SM00448 cheY-homologous receiver domain J165_00227 SM00155 Phospholipase D. Active site motifs. J165_00230 SM01266 J165_00230 J165_00232 SM00342 helix_turn_helix, arabinose operon control protein J165_00240 SM00382 ATPases associated with a variety of cellular activities J165_00240 SM01086 C-terminal, D2-small domain, of ClpB protein J165_00246 SM00915 Jacalin-like lectin domain J165_00248 SM00965 Secretin and TonB N terminus short domain J165_00252 SM00220 Serine/Threonine protein kinases, catalytic domain J165_00254 SM00028 Tetratricopeptide repeats J165_00257 SM00240 Forkhead associated domain J165_00262 SM00331 Sigma factor PP2C-like phosphatases J165_00262 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J165_00266 SM00912 haemagglutination activity domain J165_00269 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J165_00269 SM00474 3'-5' exonuclease J165_00269 SM00475 5'-3' exonuclease J165_00269 SM00482 DNA polymerase A domain J165_00280 SM00563 Phosphate acyltransferases J165_00288 SM00822 J165_00288 J165_00293 SM00825 Beta-ketoacyl synthase J165_00295 SM00248 ankyrin repeats J165_00300 SM01057 Eukaryotic-type carbonic anhydrase J165_00301 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_00301 SM00924 MgtE intracellular N domain J165_00302 SM00881 CoA binding domain J165_00315 SM00382 ATPases associated with a variety of cellular activities J165_00317 SM00342 helix_turn_helix, arabinose operon control protein J165_00325 SM00530 Helix-turn-helix XRE-family like proteins J165_00327 SM00382 ATPases associated with a variety of cellular activities J165_00331 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J165_00339 SM01004 Delta-aminolevulinic acid dehydratase J165_00342 SM00477 DNA/RNA non-specific endonuclease J165_00342 SM00892 DNA/RNA non-specific endonuclease J165_00348 SM00491 J165_00348 J165_00349 SM01060 J165_00349 J165_00350 SM00248 ankyrin repeats J165_00354 SM00448 cheY-homologous receiver domain J165_00354 SM00862 Transcriptional regulatory protein, C terminal J165_00355 SM00387 Histidine kinase-like ATPases J165_00355 SM00388 His Kinase A (phosphoacceptor) domain J165_00368 SM00960 Roadblock/LC7 domain J165_00374 SM00849 Metallo-beta-lactamase superfamily J165_00382 SM00382 ATPases associated with a variety of cellular activities J165_00385 SM00421 helix_turn_helix, Lux Regulon J165_00385 SM00448 cheY-homologous receiver domain J165_00388 SM01060 J165_00388 J165_00397 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_00401 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_00401 SM00387 Histidine kinase-like ATPases J165_00401 SM00388 His Kinase A (phosphoacceptor) domain J165_00402 SM00448 cheY-homologous receiver domain J165_00402 SM00862 Transcriptional regulatory protein, C terminal J165_00412 SM00244 prohibitin homologues J165_00420 SM00052 Putative diguanylate phosphodiesterase J165_00423 SM00382 ATPases associated with a variety of cellular activities J165_00425 SM00938 Nitrogen regulatory protein P-II J165_00432 SM00823 Phosphopantetheine attachment site J165_00432 SM00824 Thioesterase J165_00438 SM00836 DALR anticodon binding domain J165_00438 SM01016 Arginyl tRNA synthetase N terminal dom J165_00444 SM01259 J165_00444 J165_00448 SM00470 ParB-like nuclease domain J165_00457 SM00363 S4 RNA-binding domain J165_00464 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_00464 SM01232 J165_00464 J165_00467 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_00467 SM00388 His Kinase A (phosphoacceptor) domain J165_00475 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J165_00479 SM00354 helix_turn _helix lactose operon repressor J165_00481 SM00563 Phosphate acyltransferases J165_00482 SM00829 Enoylreductase J165_00487 SM00382 ATPases associated with a variety of cellular activities J165_00489 SM00829 Enoylreductase J165_00516 SM00382 ATPases associated with a variety of cellular activities J165_00540 SM00487 DEAD-like helicases superfamily J165_00540 SM00490 helicase superfamily c-terminal domain J165_00544 SM00822 J165_00544 J165_00594 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J165_00598 SM00421 helix_turn_helix, Lux Regulon J165_00598 SM00448 cheY-homologous receiver domain J165_00602 SM00862 Transcriptional regulatory protein, C terminal J165_00619 SM00642 Alpha-amylase domain J165_00620 SM00642 Alpha-amylase domain J165_00621 SM00642 Alpha-amylase domain J165_00631 SM00354 helix_turn _helix lactose operon repressor J165_00640 SM00344 helix_turn_helix ASNC type J165_00644 SM00382 ATPases associated with a variety of cellular activities J165_00647 SM00382 ATPases associated with a variety of cellular activities J165_00653 SM00530 Helix-turn-helix XRE-family like proteins J165_00658 SM00855 Phosphoglycerate mutase family J165_00659 SM00867 YceI-like domain J165_00660 SM00155 Phospholipase D. Active site motifs. J165_00662 SM00563 Phosphate acyltransferases J165_00665 SM00028 Tetratricopeptide repeats J165_00670 SM01230 J165_00670 J165_00671 SM00938 Nitrogen regulatory protein P-II J165_00673 SM00387 Histidine kinase-like ATPases J165_00673 SM00388 His Kinase A (phosphoacceptor) domain J165_00674 SM00382 ATPases associated with a variety of cellular activities J165_00674 SM00448 cheY-homologous receiver domain J165_00686 SM00450 Rhodanese Homology Domain J165_00691 SM00387 Histidine kinase-like ATPases J165_00691 SM00388 His Kinase A (phosphoacceptor) domain J165_00692 SM00382 ATPases associated with a variety of cellular activities J165_00692 SM00448 cheY-homologous receiver domain J165_00715 SM00563 Phosphate acyltransferases J165_00721 SM00342 helix_turn_helix, arabinose operon control protein J165_00726 SM00100 Cyclic nucleotide-monophosphate binding domain J165_00726 SM00267 diguanylate cyclase J165_00731 SM00878 Biotin carboxylase C-terminal domain J165_00736 SM00953 J165_00736 J165_00744 SM00833 Cobalamin synthesis protein cobW C-terminal domain J165_00749 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_00755 SM00829 Enoylreductase J165_00762 SM00487 DEAD-like helicases superfamily J165_00762 SM00490 helicase superfamily c-terminal domain J165_00762 SM00847 Helicase associated domain (HA2) Add an annotation J165_00787 SM00422 helix_turn_helix, mercury resistance J165_00794 SM00448 cheY-homologous receiver domain J165_00794 SM00862 Transcriptional regulatory protein, C terminal J165_00795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_00795 SM00387 Histidine kinase-like ATPases J165_00795 SM00388 His Kinase A (phosphoacceptor) domain J165_00821 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_00822 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_00826 SM00342 helix_turn_helix, arabinose operon control protein J165_00833 SM00420 helix_turn_helix, Deoxyribose operon repressor J165_00833 SM01134 J165_00833 J165_00836 SM00882 Coenzyme A transferase J165_00837 SM00882 Coenzyme A transferase J165_00841 SM00998 Adenylosuccinate lyase C-terminus J165_00845 SM00346 helix_turn_helix isocitrate lyase regulation J165_00846 SM00090 RIO-like kinase J165_00849 SM01228 J165_00849 J165_00860 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_00860 SM00876 Biotin and Thiamin Synthesis associated domain J165_00865 SM00369 Leucine-rich repeats, typical (most populated) subfamily J165_00885 SM00382 ATPases associated with a variety of cellular activities J165_00898 SM00267 diguanylate cyclase J165_00900 SM00642 Alpha-amylase domain J165_00901 SM00642 Alpha-amylase domain J165_00903 SM00642 Alpha-amylase domain J165_00905 SM00642 Alpha-amylase domain J165_00914 SM00822 J165_00914 J165_00916 SM00487 DEAD-like helicases superfamily J165_00916 SM00490 helicase superfamily c-terminal domain J165_00919 SM00326 Src homology 3 domains J165_00920 SM00861 Transketolase, pyrimidine binding domain J165_00922 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J165_00926 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_00946 SM00271 DnaJ molecular chaperone homology domain J165_00950 SM00046 Diacylglycerol kinase catalytic domain (presumed) J165_00954 SM00903 Flavin reductase like domain J165_00958 SM00100 Cyclic nucleotide-monophosphate binding domain J165_00958 SM00419 helix_turn_helix, cAMP Regulatory protein J165_00968 SM00387 Histidine kinase-like ATPases J165_00968 SM00388 His Kinase A (phosphoacceptor) domain J165_00968 SM00448 cheY-homologous receiver domain J165_00969 SM00052 Putative diguanylate phosphodiesterase J165_00969 SM00267 diguanylate cyclase J165_00969 SM00448 cheY-homologous receiver domain J165_00979 SM00563 Phosphate acyltransferases J165_00983 SM01209 J165_00983 J165_00983 SM01210 J165_00983 J165_00985 SM00798 AICARFT/IMPCHase bienzyme J165_00985 SM00851 MGS-like domain J165_00988 SM00195 Dual specificity phosphatase, catalytic domain J165_00992 SM00563 Phosphate acyltransferases J165_00997 SM00530 Helix-turn-helix XRE-family like proteins J165_01003 SM00878 Biotin carboxylase C-terminal domain J165_01009 SM00342 helix_turn_helix, arabinose operon control protein J165_01011 SM00234 in StAR and phosphatidylcholine transfer protein J165_01015 SM00883 Chaperonin 10 Kd subunit J165_01026 SM00944 Pro-kumamolisin, activation domain J165_01029 SM00867 YceI-like domain J165_01040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J165_01042 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_01042 SM00895 J165_01042 J165_01046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_01046 SM00331 Sigma factor PP2C-like phosphatases J165_01054 SM00342 helix_turn_helix, arabinose operon control protein J165_01069 SM00967 RNA 2'-O ribose methyltransferase substrate binding J165_01075 SM00354 helix_turn _helix lactose operon repressor J165_01085 SM00869 Autotransporter beta-domain J165_01095 SM00530 Helix-turn-helix XRE-family like proteins J165_01116 SM00382 ATPases associated with a variety of cellular activities J165_01123 SM00318 Staphylococcal nuclease homologues J165_01125 SM00528 Domain in histone-like proteins of HNS family J165_01126 SM00642 Alpha-amylase domain J165_01130 SM00448 cheY-homologous receiver domain J165_01130 SM00862 Transcriptional regulatory protein, C terminal J165_01131 SM00387 Histidine kinase-like ATPases J165_01131 SM00388 His Kinase A (phosphoacceptor) domain J165_01144 SM00382 ATPases associated with a variety of cellular activities J165_01144 SM00448 cheY-homologous receiver domain J165_01145 SM00387 Histidine kinase-like ATPases J165_01145 SM00388 His Kinase A (phosphoacceptor) domain J165_01147 SM00881 CoA binding domain J165_01149 SM01126 J165_01149 J165_01201 SM00448 cheY-homologous receiver domain J165_01202 SM00387 Histidine kinase-like ATPases J165_01222 SM00387 Histidine kinase-like ATPases J165_01223 SM00091 PAS domain J165_01227 SM00382 ATPases associated with a variety of cellular activities J165_01227 SM00994 ClpX C4-type zinc finger J165_01227 SM01086 C-terminal, D2-small domain, of ClpB protein J165_01228 SM00382 ATPases associated with a variety of cellular activities J165_01228 SM00464 Found in ATP-dependent protease La (LON) J165_01229 SM00411 bacterial (prokaryotic) histone like domain J165_01235 SM00257 Lysin motif J165_01236 SM00849 Metallo-beta-lactamase superfamily J165_01239 SM00479 J165_01239 J165_01240 SM00331 Sigma factor PP2C-like phosphatases J165_01240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J165_01245 SM00849 Metallo-beta-lactamase superfamily J165_01246 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_01259 SM00382 ATPases associated with a variety of cellular activities J165_01261 SM00493 J165_01261 J165_01264 SM00460 Transglutaminase/protease-like homologues J165_01266 SM00382 ATPases associated with a variety of cellular activities J165_01276 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J165_01277 SM00822 J165_01277 J165_01279 SM00825 Beta-ketoacyl synthase J165_01286 SM00382 ATPases associated with a variety of cellular activities J165_01295 SM01359 J165_01295 J165_01295 SM01360 J165_01295 J165_01302 SM00271 DnaJ molecular chaperone homology domain J165_01304 SM00448 cheY-homologous receiver domain J165_01306 SM00244 prohibitin homologues J165_01307 SM00244 prohibitin homologues J165_01308 SM01321 J165_01308 J165_01310 SM00788 Adenylosuccinate synthetase J165_01313 SM00822 J165_01313 J165_01323 SM00220 Serine/Threonine protein kinases, catalytic domain J165_01327 SM00855 Phosphoglycerate mutase family J165_01338 SM00052 Putative diguanylate phosphodiesterase J165_01339 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_01341 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_01342 SM01092 CO dehydrogenase flavoprotein C-terminal domain J165_01345 SM00974 J165_01345 J165_01349 SM00966 SpoVT / AbrB like domain J165_01353 SM00481 DNA polymerase alpha chain like domain J165_01355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_01362 SM00091 PAS domain J165_01362 SM00342 helix_turn_helix, arabinose operon control protein J165_01367 SM00487 DEAD-like helicases superfamily J165_01367 SM00490 helicase superfamily c-terminal domain J165_01367 SM00982 J165_01367 J165_01367 SM01058 CarD-like/TRCF domain J165_01370 SM00448 cheY-homologous receiver domain J165_01370 SM00862 Transcriptional regulatory protein, C terminal J165_01371 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_01371 SM00387 Histidine kinase-like ATPases J165_01371 SM00388 His Kinase A (phosphoacceptor) domain J165_01372 SM00645 Papain family cysteine protease J165_01386 SM00342 helix_turn_helix, arabinose operon control protein J165_01399 SM00829 Enoylreductase J165_01403 SM00342 helix_turn_helix, arabinose operon control protein J165_01403 SM00478 endonuclease III J165_01403 SM01009 AlkA N-terminal domain J165_01412 SM00487 DEAD-like helicases superfamily J165_01412 SM00490 helicase superfamily c-terminal domain J165_01413 SM00052 Putative diguanylate phosphodiesterase J165_01413 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_01413 SM00091 PAS domain J165_01413 SM00267 diguanylate cyclase J165_01414 SM00363 S4 RNA-binding domain J165_01415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_01415 SM00267 diguanylate cyclase J165_01421 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_01421 SM00387 Histidine kinase-like ATPases J165_01421 SM00388 His Kinase A (phosphoacceptor) domain J165_01422 SM00448 cheY-homologous receiver domain J165_01422 SM00862 Transcriptional regulatory protein, C terminal J165_01429 SM00382 ATPases associated with a variety of cellular activities J165_01455 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01462 SM01351 J165_01462 J165_01465 SM00977 TilS substrate C-terminal domain J165_01466 SM00098 Alkaline phosphatase homologues J165_01477 SM01160 J165_01477 J165_01490 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_01496 SM00257 Lysin motif J165_01502 SM00859 Semialdehyde dehydrogenase, NAD binding domain J165_01516 SM00052 Putative diguanylate phosphodiesterase J165_01516 SM00267 diguanylate cyclase J165_01516 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_01519 SM00822 J165_01519 J165_01528 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J165_01529 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J165_01539 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01539 SM00322 K homology RNA-binding domain J165_01543 SM01387 J165_01543 J165_01544 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01544 SM00322 K homology RNA-binding domain J165_01548 SM01001 AIR carboxylase J165_01571 SM00530 Helix-turn-helix XRE-family like proteins J165_01578 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_01579 SM00421 helix_turn_helix, Lux Regulon J165_01579 SM00448 cheY-homologous receiver domain J165_01580 SM00387 Histidine kinase-like ATPases J165_01581 SM00342 helix_turn_helix, arabinose operon control protein J165_01590 SM01012 J165_01590 J165_01595 SM00052 Putative diguanylate phosphodiesterase J165_01596 SM00869 Autotransporter beta-domain J165_01597 SM00421 helix_turn_helix, Lux Regulon J165_01597 SM00448 cheY-homologous receiver domain J165_01598 SM00387 Histidine kinase-like ATPases J165_01598 SM00388 His Kinase A (phosphoacceptor) domain J165_01602 SM00869 Autotransporter beta-domain J165_01605 SM00448 cheY-homologous receiver domain J165_01605 SM00850 LytTr DNA-binding domain J165_01638 SM01034 Sensors of blue-light using FAD J165_01646 SM00363 S4 RNA-binding domain J165_01647 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01648 SM00421 helix_turn_helix, Lux Regulon J165_01648 SM00448 cheY-homologous receiver domain J165_01649 SM00450 Rhodanese Homology Domain J165_01653 SM00984 UDP binding domain J165_01660 SM00823 Phosphopantetheine attachment site J165_01674 SM00155 Phospholipase D. Active site motifs. J165_01676 SM00490 helicase superfamily c-terminal domain J165_01678 SM00490 helicase superfamily c-terminal domain J165_01679 SM00382 ATPases associated with a variety of cellular activities J165_01681 SM00487 DEAD-like helicases superfamily J165_01684 SM00382 ATPases associated with a variety of cellular activities J165_01695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J165_01695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J165_01695 SM00493 J165_01695 J165_01717 SM00487 DEAD-like helicases superfamily J165_01744 SM00953 J165_01744 J165_01760 SM00530 Helix-turn-helix XRE-family like proteins J165_01763 SM00382 ATPases associated with a variety of cellular activities J165_01768 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J165_01768 SM00465 GIY-YIG type nucleases (URI domain) J165_01770 SM00226 Low molecular weight phosphatase family J165_01773 SM00382 ATPases associated with a variety of cellular activities J165_01776 SM00849 Metallo-beta-lactamase superfamily J165_01778 SM00382 ATPases associated with a variety of cellular activities J165_01789 SM00382 ATPases associated with a variety of cellular activities J165_01806 SM00448 cheY-homologous receiver domain J165_01807 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_01807 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_01807 SM00091 PAS domain J165_01807 SM00387 Histidine kinase-like ATPases J165_01807 SM00388 His Kinase A (phosphoacceptor) domain J165_01807 SM00448 cheY-homologous receiver domain J165_01808 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01808 SM00732 Likely ribonuclease with RNase H fold. J165_01822 SM00479 J165_01822 J165_01824 SM00529 Helix-turn-helix diphteria tox regulatory element J165_01829 SM00852 Probable molybdopterin binding domain J165_01838 SM00450 Rhodanese Homology Domain J165_01839 SM00852 Probable molybdopterin binding domain J165_01840 SM00382 ATPases associated with a variety of cellular activities J165_01841 SM00564 beta-propeller repeat J165_01844 SM00028 Tetratricopeptide repeats J165_01846 SM00562 J165_01846 J165_01853 SM00382 ATPases associated with a variety of cellular activities J165_01857 SM00382 ATPases associated with a variety of cellular activities J165_01857 SM00843 J165_01857 J165_01861 SM00316 Ribosomal protein S1-like RNA-binding domain J165_01862 SM00382 ATPases associated with a variety of cellular activities J165_01862 SM01086 C-terminal, D2-small domain, of ClpB protein J165_01867 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_01869 SM00052 Putative diguanylate phosphodiesterase J165_01869 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_01869 SM00091 PAS domain J165_01869 SM00267 diguanylate cyclase J165_01870 SM00091 PAS domain J165_01870 SM00387 Histidine kinase-like ATPases J165_01871 SM00052 Putative diguanylate phosphodiesterase J165_01871 SM00267 diguanylate cyclase J165_01871 SM00448 cheY-homologous receiver domain J165_01872 SM00387 Histidine kinase-like ATPases J165_01875 SM00858 J165_01875 J165_01876 SM00260 Two component signalling adaptor domain J165_01876 SM00448 cheY-homologous receiver domain J165_01885 SM00047 Lysozyme subfamily 2 J165_01893 SM00421 helix_turn_helix, Lux Regulon J165_01893 SM00448 cheY-homologous receiver domain J165_01895 SM00448 cheY-homologous receiver domain J165_01896 SM00382 ATPases associated with a variety of cellular activities J165_01901 SM00822 J165_01901 J165_01912 SM00382 ATPases associated with a variety of cellular activities J165_01924 SM00267 diguanylate cyclase J165_01925 SM00267 diguanylate cyclase J165_01926 SM00052 Putative diguanylate phosphodiesterase J165_01926 SM00267 diguanylate cyclase J165_01929 SM00382 ATPases associated with a variety of cellular activities J165_01929 SM00962 SRP54-type protein, GTPase domain J165_01932 SM00448 cheY-homologous receiver domain J165_01934 SM00073 Histidine Phosphotransfer domain J165_01934 SM00260 Two component signalling adaptor domain J165_01934 SM00387 Histidine kinase-like ATPases J165_01934 SM01231 J165_01934 J165_01938 SM00530 Helix-turn-helix XRE-family like proteins J165_01946 SM00382 ATPases associated with a variety of cellular activities J165_01981 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_01981 SM01240 J165_01981 J165_01986 SM00822 J165_01986 J165_01988 SM00028 Tetratricopeptide repeats J165_01990 SM00411 bacterial (prokaryotic) histone like domain J165_01991 SM00316 Ribosomal protein S1-like RNA-binding domain J165_02007 SM00354 helix_turn _helix lactose operon repressor J165_02012 SM00363 S4 RNA-binding domain J165_02017 SM00382 ATPases associated with a variety of cellular activities J165_02027 SM00357 Cold shock protein domain J165_02028 SM00382 ATPases associated with a variety of cellular activities J165_02029 SM00382 ATPases associated with a variety of cellular activities J165_02035 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J165_02037 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J165_02040 SM00859 Semialdehyde dehydrogenase, NAD binding domain J165_02048 SM00840 J165_02048 J165_02052 SM01234 J165_02052 J165_02060 SM00849 Metallo-beta-lactamase superfamily J165_02065 SM00656 J165_02065 J165_02073 SM00841 Elongation factor P, C-terminal J165_02073 SM01185 J165_02073 J165_02075 SM00052 Putative diguanylate phosphodiesterase J165_02075 SM00267 diguanylate cyclase J165_02075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02082 SM00382 ATPases associated with a variety of cellular activities J165_02083 SM00487 DEAD-like helicases superfamily J165_02083 SM00490 helicase superfamily c-terminal domain J165_02088 SM00357 Cold shock protein domain J165_02089 SM01322 J165_02089 J165_02091 SM00052 Putative diguanylate phosphodiesterase J165_02091 SM00267 diguanylate cyclase J165_02094 SM00822 J165_02094 J165_02098 SM00853 MutL C terminal dimerisation domain J165_02098 SM01340 J165_02098 J165_02099 SM00646 J165_02099 J165_02106 SM00474 3'-5' exonuclease J165_02110 SM00528 Domain in histone-like proteins of HNS family J165_02128 SM00857 Resolvase, N terminal domain J165_02143 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_02143 SM00267 diguanylate cyclase J165_02144 SM00260 Two component signalling adaptor domain J165_02145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02147 SM00487 DEAD-like helicases superfamily J165_02147 SM00490 helicase superfamily c-terminal domain J165_02158 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_02163 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_02163 SM01091 Transporter associated domain J165_02169 SM00382 ATPases associated with a variety of cellular activities J165_02175 SM01230 J165_02175 J165_02177 SM01230 J165_02177 J165_02179 SM00267 diguanylate cyclase J165_02179 SM00448 cheY-homologous receiver domain J165_02189 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_02189 SM00091 PAS domain J165_02189 SM00387 Histidine kinase-like ATPases J165_02189 SM00388 His Kinase A (phosphoacceptor) domain J165_02189 SM00448 cheY-homologous receiver domain J165_02189 SM01079 J165_02189 J165_02190 SM00448 cheY-homologous receiver domain J165_02190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_02196 SM00354 helix_turn _helix lactose operon repressor J165_02209 SM01323 J165_02209 J165_02212 SM00344 helix_turn_helix ASNC type J165_02227 SM00387 Histidine kinase-like ATPases J165_02237 SM00944 Pro-kumamolisin, activation domain J165_02248 SM01130 J165_02248 J165_02253 SM00342 helix_turn_helix, arabinose operon control protein J165_02254 SM00382 ATPases associated with a variety of cellular activities J165_02254 SM00962 SRP54-type protein, GTPase domain J165_02254 SM00963 SRP54-type protein, helical bundle domain J165_02255 SM00478 endonuclease III J165_02257 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_02257 SM00091 PAS domain J165_02257 SM00387 Histidine kinase-like ATPases J165_02257 SM00388 His Kinase A (phosphoacceptor) domain J165_02257 SM00448 cheY-homologous receiver domain J165_02260 SM00465 GIY-YIG type nucleases (URI domain) J165_02266 SM00507 HNH nucleases J165_02267 SM00861 Transketolase, pyrimidine binding domain J165_02272 SM00849 Metallo-beta-lactamase superfamily J165_02289 SM00422 helix_turn_helix, mercury resistance J165_02290 SM00411 bacterial (prokaryotic) histone like domain J165_02291 SM00873 B3/4 domain J165_02291 SM00874 tRNA synthetase B5 domain J165_02291 SM00896 Ferredoxin-fold anticodon binding domain J165_02297 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J165_02298 SM00354 helix_turn _helix lactose operon repressor J165_02299 SM00642 Alpha-amylase domain J165_02306 SM00642 Alpha-amylase domain J165_02315 SM00758 J165_02315 J165_02324 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J165_02329 SM01130 J165_02329 J165_02333 SM00670 Large family of predicted nucleotide-binding domains J165_02343 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_02343 SM00091 PAS domain J165_02343 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02346 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J165_02348 SM00382 ATPases associated with a variety of cellular activities J165_02356 SM00382 ATPases associated with a variety of cellular activities J165_02358 SM01103 J165_02358 J165_02361 SM00257 Lysin motif J165_02365 SM00463 Small MutS-related domain J165_02370 SM01192 J165_02370 J165_02370 SM01193 J165_02370 J165_02375 SM00387 Histidine kinase-like ATPases J165_02375 SM00433 TopoisomeraseII J165_02380 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_02380 SM01091 Transporter associated domain J165_02385 SM00382 ATPases associated with a variety of cellular activities J165_02387 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_02418 SM00091 PAS domain J165_02418 SM00387 Histidine kinase-like ATPases J165_02418 SM00388 His Kinase A (phosphoacceptor) domain J165_02418 SM00448 cheY-homologous receiver domain J165_02419 SM00382 ATPases associated with a variety of cellular activities J165_02420 SM00448 cheY-homologous receiver domain J165_02421 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_02421 SM00091 PAS domain J165_02421 SM00387 Histidine kinase-like ATPases J165_02421 SM00388 His Kinase A (phosphoacceptor) domain J165_02421 SM00448 cheY-homologous receiver domain J165_02422 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_02424 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02424 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02431 SM00530 Helix-turn-helix XRE-family like proteins J165_02445 SM00966 SpoVT / AbrB like domain J165_02450 SM00965 Secretin and TonB N terminus short domain J165_02454 SM00736 Dystroglycan-type cadherin-like domains. J165_02458 SM00382 ATPases associated with a variety of cellular activities J165_02469 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J165_02469 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J165_02469 SM00493 J165_02469 J165_02495 SM00220 Serine/Threonine protein kinases, catalytic domain J165_02501 SM00260 Two component signalling adaptor domain J165_02503 SM00448 cheY-homologous receiver domain J165_02504 SM00073 Histidine Phosphotransfer domain J165_02504 SM00260 Two component signalling adaptor domain J165_02504 SM00387 Histidine kinase-like ATPases J165_02504 SM01231 J165_02504 J165_02505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02507 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02507 SM01049 J165_02507 J165_02508 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02508 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02511 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02511 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02512 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02512 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02513 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02513 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02514 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02514 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02516 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02516 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02517 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02517 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02518 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02518 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02520 SM00260 Two component signalling adaptor domain J165_02522 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_02522 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_02523 SM00138 Methyltransferase, chemotaxis proteins J165_02525 SM00448 cheY-homologous receiver domain J165_02526 SM00052 Putative diguanylate phosphodiesterase J165_02526 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_02526 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_02526 SM00091 PAS domain J165_02526 SM00267 diguanylate cyclase J165_02530 SM00966 SpoVT / AbrB like domain J165_02535 SM00073 Histidine Phosphotransfer domain J165_02535 SM00387 Histidine kinase-like ATPases J165_02535 SM00388 His Kinase A (phosphoacceptor) domain J165_02535 SM00448 cheY-homologous receiver domain J165_02536 SM00448 cheY-homologous receiver domain J165_02536 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_02538 SM00937 J165_02538 J165_02539 SM00850 LytTr DNA-binding domain J165_02550 SM00851 MGS-like domain J165_02550 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J165_02552 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J165_02559 SM00899 J165_02559 J165_02563 SM00822 J165_02563 J165_02564 SM00841 Elongation factor P, C-terminal J165_02564 SM01185 J165_02564 J165_02573 SM01007 Class II Aldolase and Adducin N-terminal domain J165_02588 SM00100 Cyclic nucleotide-monophosphate binding domain J165_02588 SM00419 helix_turn_helix, cAMP Regulatory protein J165_02598 SM00912 haemagglutination activity domain J165_02613 SM00014 Acid phosphatase homologues J165_02615 SM00387 Histidine kinase-like ATPases J165_02616 SM00448 cheY-homologous receiver domain J165_02618 SM00052 Putative diguanylate phosphodiesterase J165_02618 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_02618 SM00267 diguanylate cyclase J165_02634 SM00646 J165_02634 J165_02636 SM00642 Alpha-amylase domain J165_02647 SM00382 ATPases associated with a variety of cellular activities J165_02659 SM00487 DEAD-like helicases superfamily J165_02659 SM00490 helicase superfamily c-terminal domain J165_02680 SM00830 Chorismate mutase type II J165_02684 SM00240 Forkhead associated domain J165_02689 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_02689 SM00866 J165_02689 J165_02696 SM00434 DNA Topoisomerase IV J165_02700 SM00292 breast cancer carboxy-terminal domain J165_02700 SM00532 Ligase N family J165_02703 SM00771 ZipA, C-terminal domain (FtsZ-binding) J165_02704 SM00968 SMC proteins Flexible Hinge Domain J165_02716 SM00421 helix_turn_helix, Lux Regulon J165_02716 SM00448 cheY-homologous receiver domain J165_02725 SM00947 Carbonic anhydrase J165_02730 SM00479 J165_02730 J165_02735 SM00981 J165_02735 J165_02736 SM00382 ATPases associated with a variety of cellular activities J165_02740 SM00644 J165_02740 J165_02742 SM00450 Rhodanese Homology Domain J165_02747 SM00478 endonuclease III J165_02749 SM00947 Carbonic anhydrase J165_02756 SM00382 ATPases associated with a variety of cellular activities J165_02759 SM00479 J165_02759 J165_02760 SM00267 diguanylate cyclase J165_02761 SM00967 RNA 2'-O ribose methyltransferase substrate binding J165_02763 SM00316 Ribosomal protein S1-like RNA-binding domain J165_02763 SM00357 Cold shock protein domain J165_02763 SM00955 J165_02763 J165_02767 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J165_02769 SM01018 B12 binding domain J165_02773 SM00354 helix_turn _helix lactose operon repressor J165_02777 SM00984 UDP binding domain J165_02781 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_02782 SM00382 ATPases associated with a variety of cellular activities J165_02788 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_02788 SM01091 Transporter associated domain J165_02792 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J165_02794 SM00861 Transketolase, pyrimidine binding domain J165_02799 SM00382 ATPases associated with a variety of cellular activities J165_02808 SM00271 DnaJ molecular chaperone homology domain J165_02846 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_02846 SM00267 diguanylate cyclase J165_02848 SM00267 diguanylate cyclase J165_02871 SM00357 Cold shock protein domain J165_02874 SM00947 Carbonic anhydrase J165_02877 SM00382 ATPases associated with a variety of cellular activities J165_02881 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_02887 SM00631 J165_02887 J165_02888 SM01217 J165_02888 J165_02893 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_02894 SM00342 helix_turn_helix, arabinose operon control protein J165_02895 SM00434 DNA Topoisomerase IV J165_02901 SM00710 Parallel beta-helix repeats J165_02901 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J165_02902 SM01172 J165_02902 J165_02906 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_02908 SM00972 Spore Coat Protein U domain J165_02911 SM00972 Spore Coat Protein U domain J165_02916 SM00267 diguanylate cyclase J165_02922 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_02930 SM00481 DNA polymerase alpha chain like domain J165_02947 SM00382 ATPases associated with a variety of cellular activities J165_02986 SM00671 Sel1-like repeats. J165_02986 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J165_02987 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J165_02988 SM00869 Autotransporter beta-domain J165_02992 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_02992 SM00267 diguanylate cyclase J165_02998 SM00487 DEAD-like helicases superfamily J165_02998 SM00490 helicase superfamily c-terminal domain J165_03001 SM00357 Cold shock protein domain J165_03008 SM01118 J165_03008 J165_03010 SM00448 cheY-homologous receiver domain J165_03013 SM00358 Double-stranded RNA binding motif J165_03013 SM00535 Ribonuclease III family J165_03016 SM00838 Elongation factor G C-terminus J165_03017 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_03027 SM00530 Helix-turn-helix XRE-family like proteins J165_03032 SM00812 Alpha-L-fucosidase J165_03037 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J165_03037 SM00534 ATPase domain of DNA mismatch repair MUTS family J165_03050 SM00382 ATPases associated with a variety of cellular activities J165_03050 SM00962 SRP54-type protein, GTPase domain J165_03050 SM00963 SRP54-type protein, helical bundle domain J165_03053 SM00813 Alpha-L-arabinofuranosidase C-terminus J165_03055 SM00448 cheY-homologous receiver domain J165_03056 SM00091 PAS domain J165_03056 SM00387 Histidine kinase-like ATPases J165_03056 SM00388 His Kinase A (phosphoacceptor) domain J165_03057 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_03057 SM00387 Histidine kinase-like ATPases J165_03057 SM00388 His Kinase A (phosphoacceptor) domain J165_03057 SM00448 cheY-homologous receiver domain J165_03058 SM00138 Methyltransferase, chemotaxis proteins J165_03060 SM00387 Histidine kinase-like ATPases J165_03060 SM00388 His Kinase A (phosphoacceptor) domain J165_03060 SM00448 cheY-homologous receiver domain J165_03065 SM00387 Histidine kinase-like ATPases J165_03065 SM00388 His Kinase A (phosphoacceptor) domain J165_03065 SM00448 cheY-homologous receiver domain J165_03066 SM00387 Histidine kinase-like ATPases J165_03066 SM00388 His Kinase A (phosphoacceptor) domain J165_03073 SM00342 helix_turn_helix, arabinose operon control protein J165_03074 SM00862 Transcriptional regulatory protein, C terminal J165_03076 SM00382 ATPases associated with a variety of cellular activities J165_03077 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_03086 SM00904 Riboflavin kinase J165_03104 SM00244 prohibitin homologues J165_03108 SM00478 endonuclease III J165_03111 SM00421 helix_turn_helix, Lux Regulon J165_03111 SM00448 cheY-homologous receiver domain J165_03118 SM00387 Histidine kinase-like ATPases J165_03118 SM00388 His Kinase A (phosphoacceptor) domain J165_03119 SM00448 cheY-homologous receiver domain J165_03119 SM00862 Transcriptional regulatory protein, C terminal J165_03131 SM01060 J165_03131 J165_03139 SM00073 Histidine Phosphotransfer domain J165_03139 SM00260 Two component signalling adaptor domain J165_03139 SM00387 Histidine kinase-like ATPases J165_03139 SM01231 J165_03139 J165_03140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_03140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_03141 SM00260 Two component signalling adaptor domain J165_03142 SM00052 Putative diguanylate phosphodiesterase J165_03142 SM00448 cheY-homologous receiver domain J165_03143 SM00138 Methyltransferase, chemotaxis proteins J165_03144 SM00448 cheY-homologous receiver domain J165_03145 SM00155 Phospholipase D. Active site motifs. J165_03148 SM00855 Phosphoglycerate mutase family J165_03158 SM00248 ankyrin repeats J165_03165 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J165_03166 SM01092 CO dehydrogenase flavoprotein C-terminal domain J165_03168 SM00829 Enoylreductase J165_03169 SM00267 diguanylate cyclase J165_03182 SM00732 Likely ribonuclease with RNase H fold. J165_03189 SM00382 ATPases associated with a variety of cellular activities J165_03192 SM00411 bacterial (prokaryotic) histone like domain J165_03198 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J165_03201 SM00382 ATPases associated with a variety of cellular activities J165_03207 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J165_03208 SM00671 Sel1-like repeats. J165_03214 SM00054 EF-hand, calcium binding motif J165_03232 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_03236 SM00382 ATPases associated with a variety of cellular activities J165_03245 SM00924 MgtE intracellular N domain J165_03251 SM00656 J165_03251 J165_03253 SM00421 helix_turn_helix, Lux Regulon J165_03259 SM00849 Metallo-beta-lactamase superfamily J165_03261 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J165_03265 SM00422 helix_turn_helix, mercury resistance J165_03292 SM00342 helix_turn_helix, arabinose operon control protein J165_03294 SM00387 Histidine kinase-like ATPases J165_03294 SM00388 His Kinase A (phosphoacceptor) domain J165_03294 SM00448 cheY-homologous receiver domain J165_03295 SM00387 Histidine kinase-like ATPases J165_03295 SM00388 His Kinase A (phosphoacceptor) domain J165_03295 SM00448 cheY-homologous receiver domain J165_03297 SM00387 Histidine kinase-like ATPases J165_03297 SM00388 His Kinase A (phosphoacceptor) domain J165_03297 SM00448 cheY-homologous receiver domain J165_03298 SM00867 YceI-like domain J165_03300 SM00867 YceI-like domain J165_03312 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_03318 SM00028 Tetratricopeptide repeats J165_03338 SM00812 Alpha-L-fucosidase J165_03339 SM00636 J165_03339 J165_03342 SM00758 J165_03342 J165_03342 SM01217 J165_03342 J165_03348 SM01149 J165_03348 J165_03359 SM00260 Two component signalling adaptor domain J165_03361 SM00073 Histidine Phosphotransfer domain J165_03361 SM00260 Two component signalling adaptor domain J165_03361 SM00387 Histidine kinase-like ATPases J165_03361 SM00448 cheY-homologous receiver domain J165_03361 SM01231 J165_03361 J165_03362 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_03363 SM00260 Two component signalling adaptor domain J165_03364 SM00448 cheY-homologous receiver domain J165_03365 SM00448 cheY-homologous receiver domain J165_03370 SM00491 J165_03370 J165_03375 SM00954 Region found in RelA / SpoT proteins J165_03384 SM00382 ATPases associated with a variety of cellular activities J165_03384 SM00487 DEAD-like helicases superfamily J165_03384 SM00490 helicase superfamily c-terminal domain J165_03384 SM00847 Helicase associated domain (HA2) Add an annotation J165_03386 SM00341 Helicase and RNase D C-terminal J165_03386 SM00487 DEAD-like helicases superfamily J165_03386 SM00490 helicase superfamily c-terminal domain J165_03386 SM00956 J165_03386 J165_03388 SM00448 cheY-homologous receiver domain J165_03393 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_03393 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_03396 SM00448 cheY-homologous receiver domain J165_03397 SM00091 PAS domain J165_03397 SM00911 HWE histidine kinase J165_03408 SM00382 ATPases associated with a variety of cellular activities J165_03411 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J165_03418 SM00834 Putative regulatory protein J165_03427 SM00382 ATPases associated with a variety of cellular activities J165_03447 SM00855 Phosphoglycerate mutase family J165_03459 SM00382 ATPases associated with a variety of cellular activities J165_03459 SM01086 C-terminal, D2-small domain, of ClpB protein J165_03460 SM00382 ATPases associated with a variety of cellular activities J165_03462 SM00062 Bacterial periplasmic substrate-binding proteins J165_03477 SM00564 beta-propeller repeat J165_03478 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_03500 SM00382 ATPases associated with a variety of cellular activities J165_03513 SM01329 J165_03513 J165_03517 SM00448 cheY-homologous receiver domain J165_03517 SM00862 Transcriptional regulatory protein, C terminal J165_03518 SM00387 Histidine kinase-like ATPases J165_03518 SM00388 His Kinase A (phosphoacceptor) domain J165_03522 SM00014 Acid phosphatase homologues J165_03533 SM00855 Phosphoglycerate mutase family J165_03538 SM00829 Enoylreductase J165_03540 SM00382 ATPases associated with a variety of cellular activities J165_03549 SM00829 Enoylreductase J165_03555 SM00838 Elongation factor G C-terminus J165_03563 SM00662 RNA polymerases D J165_03564 SM00363 S4 RNA-binding domain J165_03564 SM01390 J165_03564 J165_03576 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J165_03577 SM01374 J165_03577 J165_03581 SM00322 K homology RNA-binding domain J165_03584 SM01382 J165_03584 J165_03584 SM01383 J165_03584 J165_03588 SM01403 J165_03588 J165_03590 SM00838 Elongation factor G C-terminus J165_03590 SM00889 Elongation factor G, domain IV J165_03593 SM00663 RNA polymerase I subunit A N-terminus J165_03599 SM00649 Ribosomal protein L11/L12 J165_03600 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J165_03600 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J165_03610 SM01400 J165_03610 J165_03614 SM00028 Tetratricopeptide repeats J165_03616 SM00937 J165_03616 J165_03617 SM00028 Tetratricopeptide repeats J165_03618 SM00852 Probable molybdopterin binding domain J165_03641 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J165_03641 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J165_03647 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J165_03647 SM00475 5'-3' exonuclease J165_03660 SM00421 helix_turn_helix, Lux Regulon J165_03661 SM00387 Histidine kinase-like ATPases J165_03661 SM00388 His Kinase A (phosphoacceptor) domain J165_03661 SM00448 cheY-homologous receiver domain J165_03662 SM00448 cheY-homologous receiver domain J165_03674 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_03681 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_03681 SM00895 J165_03681 J165_03690 SM00108 Bulb-type mannose-specific lectin J165_03695 SM00650 Ribosomal RNA adenine dimethylases J165_03698 SM00382 ATPases associated with a variety of cellular activities J165_03710 SM00382 ATPases associated with a variety of cellular activities J165_03712 SM00382 ATPases associated with a variety of cellular activities J165_03722 SM00387 Histidine kinase-like ATPases J165_03722 SM00388 His Kinase A (phosphoacceptor) domain J165_03723 SM00448 cheY-homologous receiver domain J165_03723 SM00862 Transcriptional regulatory protein, C terminal J165_03725 SM00382 ATPases associated with a variety of cellular activities J165_03729 SM00382 ATPases associated with a variety of cellular activities J165_03753 SM00996 S-adenosyl-L-homocysteine hydrolase J165_03753 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J165_03760 SM00642 Alpha-amylase domain J165_03763 SM00944 Pro-kumamolisin, activation domain J165_03764 SM00829 Enoylreductase J165_03770 SM00957 SecA DEAD-like domain J165_03770 SM00958 SecA preprotein cross-linking domain J165_03774 SM00864 Tubulin/FtsZ family, GTPase domain J165_03774 SM00865 Tubulin/FtsZ family, C-terminal domain J165_03775 SM00842 Cell division protein FtsA J165_03801 SM00448 cheY-homologous receiver domain J165_03801 SM00862 Transcriptional regulatory protein, C terminal J165_03802 SM00387 Histidine kinase-like ATPases J165_03802 SM00388 His Kinase A (phosphoacceptor) domain J165_03808 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J165_03821 SM00382 ATPases associated with a variety of cellular activities J165_03825 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_03828 SM00829 Enoylreductase J165_03832 SM00448 cheY-homologous receiver domain J165_03832 SM00862 Transcriptional regulatory protein, C terminal J165_03833 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_03833 SM00387 Histidine kinase-like ATPases J165_03833 SM00388 His Kinase A (phosphoacceptor) domain J165_03835 SM00342 helix_turn_helix, arabinose operon control protein J165_03836 SM00849 Metallo-beta-lactamase superfamily J165_03850 SM00354 helix_turn _helix lactose operon repressor J165_03852 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_03852 SM00866 J165_03852 J165_03867 SM00382 ATPases associated with a variety of cellular activities J165_03872 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J165_03878 SM00387 Histidine kinase-like ATPases J165_03878 SM00388 His Kinase A (phosphoacceptor) domain J165_03878 SM00448 cheY-homologous receiver domain J165_03879 SM00448 cheY-homologous receiver domain J165_03880 SM00387 Histidine kinase-like ATPases J165_03880 SM00388 His Kinase A (phosphoacceptor) domain J165_03881 SM00749 bacterial OsmY and nodulation domain J165_03883 SM01350 J165_03883 J165_03894 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J165_03894 SM00245 tail specific protease J165_03895 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_03899 SM00936 Penicillin-binding protein 5, C-terminal domain J165_03902 SM00710 Parallel beta-helix repeats J165_03907 SM00268 Actin J165_03909 SM00382 ATPases associated with a variety of cellular activities J165_03911 SM00829 Enoylreductase J165_03914 SM00062 Bacterial periplasmic substrate-binding proteins J165_03914 SM00248 ankyrin repeats J165_03915 SM00564 beta-propeller repeat J165_03918 SM01263 J165_03918 J165_03919 SM00267 diguanylate cyclase J165_03925 SM00382 ATPases associated with a variety of cellular activities J165_03925 SM01086 C-terminal, D2-small domain, of ClpB protein J165_03941 SM00448 cheY-homologous receiver domain J165_03941 SM00850 LytTr DNA-binding domain J165_03947 SM00267 diguanylate cyclase J165_03949 SM00637 J165_03949 J165_03950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_03950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_03950 SM01049 J165_03950 J165_03951 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_03951 SM00091 PAS domain J165_03951 SM00267 diguanylate cyclase J165_03954 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_03956 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J165_03956 SM01232 J165_03956 J165_03964 SM00382 ATPases associated with a variety of cellular activities J165_03966 SM00062 Bacterial periplasmic substrate-binding proteins J165_03972 SM00267 diguanylate cyclase J165_03990 SM00387 Histidine kinase-like ATPases J165_03990 SM00388 His Kinase A (phosphoacceptor) domain J165_03992 SM00382 ATPases associated with a variety of cellular activities J165_04007 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_04007 SM00387 Histidine kinase-like ATPases J165_04013 SM00506 Appr-1"-p processing enzyme J165_04022 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J165_04027 SM00849 Metallo-beta-lactamase superfamily J165_04030 SM00382 ATPases associated with a variety of cellular activities J165_04042 SM00861 Transketolase, pyrimidine binding domain J165_04045 SM00028 Tetratricopeptide repeats J165_04045 SM00327 von Willebrand factor (vWF) type A domain J165_04046 SM00327 von Willebrand factor (vWF) type A domain J165_04049 SM00382 ATPases associated with a variety of cellular activities J165_04051 SM00965 Secretin and TonB N terminus short domain J165_04062 SM00487 DEAD-like helicases superfamily J165_04062 SM00490 helicase superfamily c-terminal domain J165_04064 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J165_04064 SM00954 Region found in RelA / SpoT proteins J165_04065 SM01409 J165_04065 J165_04066 SM00072 Guanylate kinase homologues. J165_04071 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_04076 SM01011 Aminopeptidase P, N-terminal domain J165_04091 SM00028 Tetratricopeptide repeats J165_04091 SM00382 ATPases associated with a variety of cellular activities J165_04091 SM00421 helix_turn_helix, Lux Regulon J165_04105 SM00464 Found in ATP-dependent protease La (LON) J165_04115 SM00342 helix_turn_helix, arabinose operon control protein J165_04116 SM00862 Transcriptional regulatory protein, C terminal J165_04120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_04126 SM00917 LeuA allosteric (dimerisation) domain J165_04127 SM01329 J165_04127 J165_04131 SM00267 diguanylate cyclase J165_04142 SM00919 Malic enzyme, NAD binding domain J165_04142 SM01274 J165_04142 J165_04145 SM00387 Histidine kinase-like ATPases J165_04145 SM00388 His Kinase A (phosphoacceptor) domain J165_04145 SM00448 cheY-homologous receiver domain J165_04153 SM00421 helix_turn_helix, Lux Regulon J165_04153 SM00448 cheY-homologous receiver domain J165_04155 SM00387 Histidine kinase-like ATPases J165_04155 SM00388 His Kinase A (phosphoacceptor) domain J165_04156 SM00448 cheY-homologous receiver domain J165_04156 SM00862 Transcriptional regulatory protein, C terminal J165_04160 SM00822 J165_04160 J165_04161 SM00354 helix_turn _helix lactose operon repressor J165_04164 SM00642 Alpha-amylase domain J165_04166 SM01154 J165_04166 J165_04173 SM00450 Rhodanese Homology Domain J165_04187 SM00028 Tetratricopeptide repeats J165_04202 SM00345 helix_turn_helix gluconate operon transcriptional repressor J165_04202 SM00866 J165_04202 J165_04214 SM00382 ATPases associated with a variety of cellular activities J165_04219 SM01211 J165_04219 J165_04232 SM00656 J165_04232 J165_04238 SM00528 Domain in histone-like proteins of HNS family J165_04241 SM00382 ATPases associated with a variety of cellular activities J165_04247 SM00882 Coenzyme A transferase J165_04248 SM00882 Coenzyme A transferase J165_04251 SM00984 UDP binding domain J165_04256 SM00893 Electron transfer flavoprotein domain J165_04257 SM00893 Electron transfer flavoprotein domain J165_04272 SM00382 ATPases associated with a variety of cellular activities J165_04275 SM00116 Domain in cystathionine beta-synthase and other proteins. J165_04282 SM00487 DEAD-like helicases superfamily J165_04282 SM00490 helicase superfamily c-terminal domain J165_04288 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_04295 SM00825 Beta-ketoacyl synthase J165_04309 SM00382 ATPases associated with a variety of cellular activities J165_04313 SM00382 ATPases associated with a variety of cellular activities J165_04313 SM00448 cheY-homologous receiver domain J165_04314 SM00387 Histidine kinase-like ATPases J165_04318 SM00830 Chorismate mutase type II J165_04320 SM00382 ATPases associated with a variety of cellular activities J165_04334 SM00986 Uracil DNA glycosylase superfamily J165_04334 SM00987 UreE urease accessory protein, C-terminal domain J165_04340 SM00382 ATPases associated with a variety of cellular activities J165_04340 SM00930 J165_04340 J165_04344 SM00387 Histidine kinase-like ATPases J165_04344 SM00388 His Kinase A (phosphoacceptor) domain J165_04344 SM00448 cheY-homologous receiver domain J165_04355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_04355 SM00091 PAS domain J165_04355 SM00387 Histidine kinase-like ATPases J165_04355 SM00388 His Kinase A (phosphoacceptor) domain J165_04355 SM00448 cheY-homologous receiver domain J165_04359 SM01005 Alanine racemase, C-terminal domain J165_04361 SM00344 helix_turn_helix ASNC type J165_04372 SM00382 ATPases associated with a variety of cellular activities J165_04374 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J165_04375 SM00986 Uracil DNA glycosylase superfamily J165_04375 SM00987 UreE urease accessory protein, C-terminal domain J165_04376 SM00729 Elongator protein 3, MiaB family, Radical SAM J165_04389 SM00448 cheY-homologous receiver domain J165_04389 SM00850 LytTr DNA-binding domain J165_04390 SM00387 Histidine kinase-like ATPases J165_04397 SM00091 PAS domain J165_04397 SM00138 Methyltransferase, chemotaxis proteins J165_04397 SM00911 HWE histidine kinase J165_04398 SM00448 cheY-homologous receiver domain J165_04400 SM00382 ATPases associated with a variety of cellular activities J165_04400 SM00448 cheY-homologous receiver domain J165_04411 SM00382 ATPases associated with a variety of cellular activities J165_04426 SM00382 ATPases associated with a variety of cellular activities J165_04427 SM00631 J165_04427 J165_04432 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J165_04432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J165_04433 SM00477 DNA/RNA non-specific endonuclease J165_04433 SM00892 DNA/RNA non-specific endonuclease J165_04448 SM00382 ATPases associated with a variety of cellular activities J165_04494 SM00382 ATPases associated with a variety of cellular activities J165_04525 SM00257 Lysin motif J165_04530 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J165_04530 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J165_04530 SM00493 J165_04530 J165_04541 SM00487 DEAD-like helicases superfamily J165_04541 SM00490 helicase superfamily c-terminal domain J165_04548 SM00986 Uracil DNA glycosylase superfamily J165_04548 SM00987 UreE urease accessory protein, C-terminal domain J165_04549 SM00448 cheY-homologous receiver domain J165_04551 SM00382 ATPases associated with a variety of cellular activities J165_04552 SM00487 DEAD-like helicases superfamily J165_04552 SM00490 helicase superfamily c-terminal domain J165_04554 SM00357 Cold shock protein domain J165_04554 SM00382 ATPases associated with a variety of cellular activities J165_04554 SM00959 Rho termination factor, N-terminal domain J165_04560 SM00487 DEAD-like helicases superfamily J165_04568 SM00382 ATPases associated with a variety of cellular activities J165_04570 SM00257 Lysin motif J165_04576 SM01150 J165_04576 J165_04585 SM00644 J165_04585 J165_04587 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J165_04594 SM01217 J165_04594 J165_04595 SM00905 Dihydroneopterin aldolase J165_04600 SM00400 zinc finger J165_04600 SM00493 J165_04600 J165_04600 SM00766 DNA primase DnaG DnaB-binding J165_04623 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_04623 SM00091 PAS domain J165_04635 SM00347 helix_turn_helix multiple antibiotic resistance protein J165_04642 SM00155 Phospholipase D. Active site motifs. J165_04658 SM00796 Allophanate hydrolase subunit 1 J165_04658 SM00797 Allophanate hydrolase subunit 2 J165_04658 SM00878 Biotin carboxylase C-terminal domain J165_04672 SM00382 ATPases associated with a variety of cellular activities J165_04682 SM00829 Enoylreductase J165_04690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J165_04690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J165_04690 SM00091 PAS domain J165_04690 SM00267 diguanylate cyclase J165_04696 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J165_04702 SM00014 Acid phosphatase homologues J165_04704 SM00028 Tetratricopeptide repeats