locus-tag class description J166_00005 PF00239 Resolvase, N terminal domain J166_00005 PF02796 Helix-turn-helix domain of resolvase J166_00007 PF02384 N-6 DNA Methylase J166_00008 PF07669 Eco57I restriction-modification methylase J166_00010 PF03389 MobA/MobL family J166_00010 PF01443 Viral (Superfamily 1) RNA helicase J166_00010 PF17841 BID domain of Bartonella effector protein (Bep) J166_00012 PF02534 Type IV secretory system Conjugative DNA transfer J166_00015 PF01850 PIN domain J166_00017 PF02796 Helix-turn-helix domain of resolvase J166_00017 PF00239 Resolvase, N terminal domain J166_00024 PF01527 Transposase J166_00027 PF13700 Domain of unknown function (DUF4158) J166_00027 PF01526 Tn3 transposase DDE domain J166_00029 PF02796 Helix-turn-helix domain of resolvase J166_00029 PF00239 Resolvase, N terminal domain J166_00031 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J166_00035 PF03377 TAL effector repeat J166_00036 PF02796 Helix-turn-helix domain of resolvase J166_00036 PF00239 Resolvase, N terminal domain J166_00039 PF13700 Domain of unknown function (DUF4158) J166_00039 PF01526 Tn3 transposase DDE domain J166_00040 PF03695 Uncharacterised protein family (UPF0149) J166_00040 PF02810 SEC-C motif J166_00042 PF03377 TAL effector repeat J166_00043 PF13276 HTH-like domain J166_00043 PF00665 Integrase core domain J166_00043 PF13333 Integrase core domain J166_00044 PF13276 HTH-like domain J166_00044 PF13333 Integrase core domain J166_00044 PF00665 Integrase core domain J166_00045 PF00239 Resolvase, N terminal domain J166_00045 PF02796 Helix-turn-helix domain of resolvase J166_00046 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J166_00051 PF13614 AAA domain J166_00052 PF02195 ParB-like nuclease domain J166_00052 PF08535 KorB domain J166_00052 PF06613 KorB C-terminal beta-barrel domain J166_00055 PF01527 Transposase J166_00059 PF01695 IstB-like ATP binding protein J166_00060 PF00665 Integrase core domain J166_00060 PF02796 Helix-turn-helix domain of resolvase J166_00071 PF09397 Ftsk gamma domain J166_00071 PF17854 FtsK alpha domain J166_00071 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J166_00071 PF01580 FtsK/SpoIIIE family J166_00073 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J166_00080 PF02810 SEC-C motif J166_00080 PF03695 Uncharacterised protein family (UPF0149) J166_00081 PF13700 Domain of unknown function (DUF4158) J166_00081 PF01526 Tn3 transposase DDE domain J166_00084 PF00308 Bacterial dnaA protein J166_00084 PF08299 Bacterial dnaA protein helix-turn-helix J166_00084 PF11638 DnaA N-terminal domain J166_00085 PF00712 DNA polymerase III beta subunit, N-terminal domain J166_00085 PF02767 DNA polymerase III beta subunit, central domain J166_00085 PF02768 DNA polymerase III beta subunit, C-terminal domain J166_00086 PF02463 RecF/RecN/SMC N terminal domain J166_00088 PF00204 DNA gyrase B J166_00088 PF00986 DNA gyrase B subunit, carboxyl terminus J166_00088 PF18053 DNA gyrase B subunit insert domain J166_00088 PF01751 Toprim domain J166_00088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00090 PF01435 Peptidase family M48 J166_00092 PF03544 Gram-negative bacterial TonB protein C-terminal J166_00093 PF01618 MotA/TolQ/ExbB proton channel family J166_00094 PF02472 Biopolymer transport protein ExbD/TolR J166_00095 PF02472 Biopolymer transport protein ExbD/TolR J166_00096 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J166_00098 PF13091 PLD-like domain J166_00098 PF13396 Phospholipase_D-nuclease N-terminal J166_00101 PF04055 Radical SAM superfamily J166_00103 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J166_00106 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J166_00106 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J166_00107 PF13180 PDZ domain J166_00107 PF03572 Peptidase family S41 J166_00108 PF01551 Peptidase family M23 J166_00110 PF04389 Peptidase family M28 J166_00112 PF00150 Cellulase (glycosyl hydrolase family 5) J166_00113 PF00150 Cellulase (glycosyl hydrolase family 5) J166_00120 PF04616 Glycosyl hydrolases family 43 J166_00124 PF03422 Carbohydrate binding module (family 6) J166_00124 PF00331 Glycosyl hydrolase family 10 J166_00124 PF00553 Cellulose binding domain J166_00126 PF00331 Glycosyl hydrolase family 10 J166_00126 PF03422 Carbohydrate binding module (family 6) J166_00126 PF00553 Cellulose binding domain J166_00127 PF02614 Glucuronate isomerase J166_00128 PF16355 Domain of unknown function (DUF4982) J166_00128 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J166_00128 PF00703 Glycosyl hydrolases family 2 J166_00128 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J166_00128 PF02837 Glycosyl hydrolases family 2, sugar binding domain J166_00129 PF00331 Glycosyl hydrolase family 10 J166_00130 PF08450 SMP-30/Gluconolactonase/LRE-like region J166_00133 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J166_00133 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J166_00135 PF00202 Aminotransferase class-III J166_00138 PF00171 Aldehyde dehydrogenase family J166_00143 PF01232 Mannitol dehydrogenase Rossmann domain J166_00143 PF08125 Mannitol dehydrogenase C-terminal domain J166_00144 PF07691 PA14 domain J166_00144 PF14310 Fibronectin type III-like domain J166_00144 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_00144 PF01915 Glycosyl hydrolase family 3 C-terminal domain J166_00145 PF04616 Glycosyl hydrolases family 43 J166_00145 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J166_00146 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J166_00146 PF13378 Enolase C-terminal domain-like J166_00148 PF03648 Glycosyl hydrolase family 67 N-terminus J166_00148 PF07488 Glycosyl hydrolase family 67 middle domain J166_00148 PF07477 Glycosyl hydrolase family 67 C-terminus J166_00149 PF00356 Bacterial regulatory proteins, lacI family J166_00151 PF01171 PP-loop family J166_00152 PF04381 Putative exonuclease, RdgC J166_00154 PF12697 Alpha/beta hydrolase family J166_00155 PF00762 Ferrochelatase J166_00157 PF02416 mttA/Hcf106 family J166_00158 PF02416 mttA/Hcf106 family J166_00159 PF00902 Sec-independent protein translocase protein (TatC) J166_00161 PF00958 GMP synthase C terminal domain J166_00161 PF00117 Glutamine amidotransferase class-I J166_00163 PF00437 Type II/IV secretion system protein J166_00163 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J166_00164 PF02091 Glycyl-tRNA synthetase alpha subunit J166_00165 PF02092 Glycyl-tRNA synthetase beta subunit J166_00165 PF05746 DALR anticodon binding domain J166_00166 PF13181 Tetratricopeptide repeat J166_00171 PF07715 TonB-dependent Receptor Plug Domain J166_00171 PF00593 TonB dependent receptor J166_00172 PF01103 Surface antigen J166_00172 PF17243 POTRA domain TamA domain 1 J166_00173 PF04357 TamB, inner membrane protein subunit of TAM complex J166_00177 PF13360 PQQ-like domain J166_00177 PF13570 PQQ-like domain J166_00177 PF01011 PQQ enzyme repeat J166_00181 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J166_00181 PF06165 Glycosyltransferase family 36 J166_00183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00183 PF00512 His Kinase A (phospho-acceptor) domain J166_00184 PF02659 Putative manganese efflux pump J166_00185 PF09339 IclR helix-turn-helix domain J166_00185 PF01614 Bacterial transcriptional regulator J166_00186 PF07690 Major Facilitator Superfamily J166_00187 PF05336 L-rhamnose mutarotase J166_00189 PF13378 Enolase C-terminal domain-like J166_00189 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J166_00190 PF01557 Fumarylacetoacetate (FAA) hydrolase family J166_00193 PF00248 Aldo/keto reductase family J166_00194 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J166_00194 PF04616 Glycosyl hydrolases family 43 J166_00199 PF00072 Response regulator receiver domain J166_00199 PF00196 Bacterial regulatory proteins, luxR family J166_00200 PF16177 Acetyl-coenzyme A synthetase N-terminus J166_00200 PF00501 AMP-binding enzyme J166_00200 PF13193 AMP-binding enzyme C-terminal domain J166_00202 PF04341 Protein of unknown function, DUF485 J166_00203 PF00474 Sodium:solute symporter family J166_00205 PF09312 SurA N-terminal domain J166_00207 PF00480 ROK family J166_00209 PF03372 Endonuclease/Exonuclease/phosphatase family J166_00211 PF04226 Transglycosylase associated protein J166_00212 PF01648 4'-phosphopantetheinyl transferase superfamily J166_00213 PF09423 PhoD-like phosphatase J166_00213 PF16655 PhoD-like phosphatase, N-terminal domain J166_00215 PF16655 PhoD-like phosphatase, N-terminal domain J166_00215 PF09423 PhoD-like phosphatase J166_00216 PF02527 rRNA small subunit methyltransferase G J166_00220 PF13533 Biotin-lipoyl like J166_00221 PF00873 AcrB/AcrD/AcrF family J166_00222 PF00830 Ribosomal L28 family J166_00223 PF00471 Ribosomal protein L33 J166_00224 PF04909 Amidohydrolase J166_00225 PF04303 PrpF protein J166_00226 PF03737 Aldolase/RraA J166_00227 PF03466 LysR substrate binding domain J166_00227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00228 PF13091 PLD-like domain J166_00228 PF13396 Phospholipase_D-nuclease N-terminal J166_00230 PF13361 UvrD-like helicase C-terminal domain J166_00230 PF00580 UvrD/REP helicase N-terminal domain J166_00231 PF14602 Hexapeptide repeat of succinyl-transferase J166_00231 PF12464 Maltose acetyltransferase J166_00236 PF05638 Type VI secretion system effector, Hcp J166_00241 PF07724 AAA domain (Cdc48 subfamily) J166_00241 PF10431 C-terminal, D2-small domain, of ClpB protein J166_00241 PF00004 ATPase family associated with various cellular activities (AAA) J166_00241 PF17871 AAA lid domain J166_00248 PF00328 Histidine phosphatase superfamily (branch 2) J166_00251 PF08281 Sigma-70, region 4 J166_00251 PF04542 Sigma-70 region 2 J166_00253 PF03793 PASTA domain J166_00253 PF00069 Protein kinase domain J166_00256 PF04717 Type VI secretion system, phage-baseplate injector J166_00264 PF03793 PASTA domain J166_00264 PF00069 Protein kinase domain J166_00270 PF01612 3'-5' exonuclease J166_00270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J166_00270 PF00476 DNA polymerase family A J166_00270 PF01367 5'-3' exonuclease, C-terminal SAM fold J166_00271 PF01218 Coproporphyrinogen III oxidase J166_00274 PF00326 Prolyl oligopeptidase family J166_00274 PF07676 WD40-like Beta Propeller Repeat J166_00278 PF04820 Tryptophan halogenase J166_00279 PF00550 Phosphopantetheine attachment site J166_00281 PF01553 Acyltransferase J166_00282 PF07977 FabA-like domain J166_00292 PF00535 Glycosyl transferase family 2 J166_00294 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_00294 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_00295 PF05166 YcgL domain J166_00298 PF00723 Glycosyl hydrolases family 15 J166_00299 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J166_00299 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J166_00300 PF00999 Sodium/hydrogen exchanger family J166_00300 PF02254 TrkA-N domain J166_00301 PF00194 Eukaryotic-type carbonic anhydrase J166_00302 PF03448 MgtE intracellular N domain J166_00302 PF00571 CBS domain J166_00302 PF01769 Divalent cation transporter J166_00303 PF00583 Acetyltransferase (GNAT) family J166_00303 PF13607 Succinyl-CoA ligase like flavodoxin domain J166_00303 PF13380 CoA binding domain J166_00305 PF03477 ATP cone domain J166_00305 PF00317 Ribonucleotide reductase, all-alpha domain J166_00305 PF02867 Ribonucleotide reductase, barrel domain J166_00306 PF00268 Ribonucleotide reductase, small chain J166_00312 PF02558 Ketopantoate reductase PanE/ApbA J166_00312 PF08546 Ketopantoate reductase PanE/ApbA C terminal J166_00315 PF01061 ABC-2 type transporter J166_00316 PF00005 ABC transporter J166_00317 PF00970 Oxidoreductase FAD-binding domain J166_00317 PF00175 Oxidoreductase NAD-binding domain J166_00317 PF00111 2Fe-2S iron-sulfur cluster binding domain J166_00318 PF01965 DJ-1/PfpI family J166_00318 PF12833 Helix-turn-helix domain J166_00320 PF07715 TonB-dependent Receptor Plug Domain J166_00320 PF00593 TonB dependent receptor J166_00322 PF16916 Dimerisation domain of Zinc Transporter J166_00322 PF01545 Cation efflux family J166_00323 PF02583 Metal-sensitive transcriptional repressor J166_00324 PF01229 Glycosyl hydrolases family 39 J166_00326 PF01381 Helix-turn-helix J166_00328 PF00005 ABC transporter J166_00331 PF04820 Tryptophan halogenase J166_00335 PF02798 Glutathione S-transferase, N-terminal domain J166_00335 PF00043 Glutathione S-transferase, C-terminal domain J166_00336 PF00326 Prolyl oligopeptidase family J166_00336 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J166_00340 PF00490 Delta-aminolevulinic acid dehydratase J166_00342 PF03466 LysR substrate binding domain J166_00342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00344 PF00175 Oxidoreductase NAD-binding domain J166_00344 PF00667 FAD binding domain J166_00344 PF00258 Flavodoxin J166_00346 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J166_00346 PF01488 Shikimate / quinate 5-dehydrogenase J166_00346 PF08501 Shikimate dehydrogenase substrate binding domain J166_00349 PF13307 Helicase C-terminal domain J166_00349 PF06733 DEAD_2 J166_00350 PF06628 Catalase-related immune-responsive J166_00350 PF00199 Catalase J166_00353 PF01207 Dihydrouridine synthase (Dus) J166_00355 PF00486 Transcriptional regulatory protein, C terminal J166_00355 PF00072 Response regulator receiver domain J166_00356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00356 PF00512 His Kinase A (phospho-acceptor) domain J166_00356 PF00672 HAMP domain J166_00359 PF06167 Glucose-regulated metallo-peptidase M90 J166_00361 PF08279 HTH domain J166_00361 PF02237 Biotin protein ligase C terminal domain J166_00361 PF03099 Biotin/lipoate A/B protein ligase family J166_00362 PF03309 Type III pantothenate kinase J166_00365 PF02223 Thymidylate kinase J166_00370 PF00491 Arginase family J166_00373 PF05532 CsbD-like J166_00374 PF00579 tRNA synthetases class I (W and Y) J166_00375 PF00753 Metallo-beta-lactamase superfamily J166_00378 PF00892 EamA-like transporter family J166_00379 PF00892 EamA-like transporter family J166_00383 PF00005 ABC transporter J166_00384 PF13533 Biotin-lipoyl like J166_00385 PF07730 Histidine kinase J166_00386 PF00196 Bacterial regulatory proteins, luxR family J166_00386 PF00072 Response regulator receiver domain J166_00389 PF00199 Catalase J166_00390 PF04542 Sigma-70 region 2 J166_00390 PF08281 Sigma-70, region 4 J166_00392 PF02789 Cytosol aminopeptidase family, N-terminal domain J166_00392 PF00883 Cytosol aminopeptidase family, catalytic domain J166_00393 PF13419 Haloacid dehalogenase-like hydrolase J166_00394 PF01594 AI-2E family transporter J166_00398 PF00595 PDZ domain J166_00402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00402 PF00512 His Kinase A (phospho-acceptor) domain J166_00402 PF08521 Two-component sensor kinase N-terminal J166_00403 PF00072 Response regulator receiver domain J166_00403 PF00486 Transcriptional regulatory protein, C terminal J166_00404 PF08338 Domain of unknown function (DUF1731) J166_00404 PF01370 NAD dependent epimerase/dehydratase family J166_00412 PF01139 tRNA-splicing ligase RtcB J166_00418 PF00440 Bacterial regulatory proteins, tetR family J166_00419 PF00111 2Fe-2S iron-sulfur cluster binding domain J166_00419 PF00175 Oxidoreductase NAD-binding domain J166_00419 PF00970 Oxidoreductase FAD-binding domain J166_00420 PF00487 Fatty acid desaturase J166_00421 PF00563 EAL domain J166_00421 PF12792 CSS motif domain associated with EAL J166_00424 PF13335 Magnesium chelatase, subunit ChlI C-terminal J166_00424 PF01078 Magnesium chelatase, subunit ChlI J166_00425 PF04380 Membrane fusogenic activity J166_00426 PF00543 Nitrogen regulatory protein P-II J166_00431 PF17284 Spermidine synthase tetramerisation domain J166_00432 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J166_00432 PF17944 Arginine decarboxylase C-terminal helical extension J166_00432 PF17810 Arginine decarboxylase helical bundle domain J166_00433 PF13193 AMP-binding enzyme C-terminal domain J166_00433 PF00975 Thioesterase domain J166_00433 PF00550 Phosphopantetheine attachment site J166_00433 PF00668 Condensation domain J166_00433 PF00501 AMP-binding enzyme J166_00434 PF03033 Glycosyltransferase family 28 N-terminal domain J166_00435 PF01757 Acyltransferase family J166_00436 PF00106 short chain dehydrogenase J166_00439 PF00750 tRNA synthetases class I (R) J166_00439 PF03485 Arginyl tRNA synthetase N terminal domain J166_00439 PF05746 DALR anticodon binding domain J166_00440 PF04002 RadC-like JAB domain J166_00441 PF02441 Flavoprotein J166_00441 PF04127 DNA / pantothenate metabolism flavoprotein J166_00442 PF00692 dUTPase J166_00443 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J166_00443 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J166_00443 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J166_00443 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J166_00446 PF00535 Glycosyl transferase family 2 J166_00447 PF01370 NAD dependent epimerase/dehydratase family J166_00449 PF02195 ParB-like nuclease domain J166_00449 PF17762 HTH domain found in ParB protein J166_00450 PF13614 AAA domain J166_00452 PF00156 Phosphoribosyl transferase domain J166_00453 PF03372 Endonuclease/Exonuclease/phosphatase family J166_00454 PF07690 Major Facilitator Superfamily J166_00456 PF03702 Anhydro-N-acetylmuramic acid kinase J166_00457 PF04225 Opacity-associated protein A LysM-like domain J166_00457 PF01551 Peptidase family M23 J166_00458 PF00579 tRNA synthetases class I (W and Y) J166_00465 PF06827 Zinc finger found in FPG and IleRS J166_00465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J166_00465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J166_00467 PF04349 Periplasmic glucan biosynthesis protein, MdoG J166_00468 PF08446 PAS fold J166_00468 PF00360 Phytochrome region J166_00468 PF01590 GAF domain J166_00468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00468 PF00512 His Kinase A (phospho-acceptor) domain J166_00469 PF00265 Thymidine kinase J166_00470 PF13361 UvrD-like helicase C-terminal domain J166_00470 PF00580 UvrD/REP helicase N-terminal domain J166_00473 PF04337 Protein of unknown function, DUF480 J166_00475 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J166_00476 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J166_00477 PF04820 Tryptophan halogenase J166_00480 PF00356 Bacterial regulatory proteins, lacI family J166_00482 PF01553 Acyltransferase J166_00483 PF00698 Acyl transferase domain J166_00483 PF16197 Ketoacyl-synthetase C-terminal extension J166_00483 PF14765 Polyketide synthase dehydratase J166_00483 PF00550 Phosphopantetheine attachment site J166_00483 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_00483 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_00483 PF08659 KR domain J166_00483 PF08240 Alcohol dehydrogenase GroES-like domain J166_00483 PF00107 Zinc-binding dehydrogenase J166_00487 PF00665 Integrase core domain J166_00487 PF02796 Helix-turn-helix domain of resolvase J166_00488 PF01695 IstB-like ATP binding protein J166_00489 PF00150 Cellulase (glycosyl hydrolase family 5) J166_00490 PF08240 Alcohol dehydrogenase GroES-like domain J166_00490 PF00107 Zinc-binding dehydrogenase J166_00491 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_00491 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J166_00492 PF01493 GXGXG motif J166_00492 PF00310 Glutamine amidotransferases class-II J166_00492 PF04898 Glutamate synthase central domain J166_00492 PF01645 Conserved region in glutamate synthase J166_00496 PF01804 Penicillin amidase J166_00498 PF03466 LysR substrate binding domain J166_00498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00501 PF02397 Bacterial sugar transferase J166_00502 PF02350 UDP-N-acetylglucosamine 2-epimerase J166_00504 PF03808 Glycosyl transferase WecB/TagA/CpsF family J166_00505 PF13439 Glycosyltransferase Family 4 J166_00505 PF00534 Glycosyl transferases group 1 J166_00511 PF00733 Asparagine synthase J166_00511 PF13537 Glutamine amidotransferase domain J166_00514 PF16363 GDP-mannose 4,6 dehydratase J166_00517 PF00664 ABC transporter transmembrane region J166_00517 PF00005 ABC transporter J166_00519 PF13537 Glutamine amidotransferase domain J166_00519 PF00733 Asparagine synthase J166_00524 PF00685 Sulfotransferase domain J166_00541 PF00271 Helicase conserved C-terminal domain J166_00541 PF09369 Domain of unknown function (DUF1998) J166_00541 PF00270 DEAD/DEAH box helicase J166_00542 PF03006 Haemolysin-III related J166_00545 PF00106 short chain dehydrogenase J166_00547 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00547 PF03466 LysR substrate binding domain J166_00551 PF02525 Flavodoxin-like fold J166_00553 PF01527 Transposase J166_00554 PF13333 Integrase core domain J166_00554 PF00665 Integrase core domain J166_00554 PF13276 HTH-like domain J166_00562 PF05532 CsbD-like J166_00566 PF01447 Thermolysin metallopeptidase, catalytic domain J166_00566 PF02868 Thermolysin metallopeptidase, alpha-helical domain J166_00566 PF16485 Protealysin propeptide J166_00568 PF00293 NUDIX domain J166_00568 PF13344 Haloacid dehalogenase-like hydrolase J166_00571 PF00085 Thioredoxin J166_00572 PF08946 Osmosensory transporter coiled coil J166_00572 PF00083 Sugar (and other) transporter J166_00580 PF17863 AAA lid domain J166_00580 PF07726 ATPase family associated with various cellular activities (AAA) J166_00586 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J166_00587 PF00155 Aminotransferase class I and II J166_00588 PF07715 TonB-dependent Receptor Plug Domain J166_00588 PF00593 TonB dependent receptor J166_00590 PF07883 Cupin domain J166_00591 PF00171 Aldehyde dehydrogenase family J166_00595 PF02735 Ku70/Ku80 beta-barrel domain J166_00596 PF01070 FMN-dependent dehydrogenase J166_00597 PF00144 Beta-lactamase J166_00598 PF07730 Histidine kinase J166_00599 PF00196 Bacterial regulatory proteins, luxR family J166_00599 PF00072 Response regulator receiver domain J166_00603 PF00486 Transcriptional regulatory protein, C terminal J166_00603 PF18500 CadC C-terminal domain 1 J166_00604 PF07055 Enoyl reductase FAD binding domain J166_00604 PF12241 Trans-2-enoyl-CoA reductase catalytic region J166_00604 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J166_00606 PF00294 pfkB family carbohydrate kinase J166_00618 PF01527 Transposase J166_00619 PF00665 Integrase core domain J166_00619 PF13333 Integrase core domain J166_00619 PF13276 HTH-like domain J166_00620 PF00128 Alpha amylase, catalytic domain J166_00620 PF11896 Domain of unknown function (DUF3416) J166_00621 PF16657 Maltogenic Amylase, C-terminal domain J166_00621 PF00128 Alpha amylase, catalytic domain J166_00622 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J166_00622 PF02806 Alpha amylase, C-terminal all-beta domain J166_00622 PF00128 Alpha amylase, catalytic domain J166_00624 PF00248 Aldo/keto reductase family J166_00625 PF00135 Carboxylesterase family J166_00626 PF07859 alpha/beta hydrolase fold J166_00626 PF13472 GDSL-like Lipase/Acylhydrolase family J166_00628 PF03480 Bacterial extracellular solute-binding protein, family 7 J166_00630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J166_00631 PF04616 Glycosyl hydrolases family 43 J166_00631 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J166_00632 PF00356 Bacterial regulatory proteins, lacI family J166_00633 PF04962 KduI/IolB family J166_00636 PF00657 GDSL-like Lipase/Acylhydrolase J166_00640 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J166_00641 PF01037 Lrp/AsnC ligand binding domain J166_00642 PF00593 TonB dependent receptor J166_00642 PF07660 Secretin and TonB N terminus short domain J166_00642 PF07715 TonB-dependent Receptor Plug Domain J166_00643 PF01734 Patatin-like phospholipase J166_00645 PF00005 ABC transporter J166_00648 PF00005 ABC transporter J166_00649 PF00528 Binding-protein-dependent transport system inner membrane component J166_00651 PF03781 Sulfatase-modifying factor enzyme 1 J166_00651 PF12867 DinB superfamily J166_00654 PF01381 Helix-turn-helix J166_00658 PF01883 Iron-sulfur cluster assembly protein J166_00658 PF10609 NUBPL iron-transfer P-loop NTPase J166_00661 PF13091 PLD-like domain J166_00662 PF03061 Thioesterase superfamily J166_00670 PF02673 Bacitracin resistance protein BacA J166_00671 PF03951 Glutamine synthetase, beta-Grasp domain J166_00671 PF00120 Glutamine synthetase, catalytic domain J166_00672 PF00543 Nitrogen regulatory protein P-II J166_00673 PF00909 Ammonium Transporter Family J166_00674 PF00512 His Kinase A (phospho-acceptor) domain J166_00674 PF00989 PAS fold J166_00674 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00675 PF00158 Sigma-54 interaction domain J166_00675 PF02954 Bacterial regulatory protein, Fis family J166_00675 PF00072 Response regulator receiver domain J166_00676 PF00080 Copper/zinc superoxide dismutase (SODC) J166_00677 PF00080 Copper/zinc superoxide dismutase (SODC) J166_00680 PF02803 Thiolase, C-terminal domain J166_00680 PF00108 Thiolase, N-terminal domain J166_00687 PF00581 Rhodanese-like domain J166_00688 PF02556 Preprotein translocase subunit SecB J166_00689 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J166_00689 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J166_00691 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J166_00691 PF00205 Thiamine pyrophosphate enzyme, central domain J166_00691 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J166_00692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00693 PF00072 Response regulator receiver domain J166_00693 PF00158 Sigma-54 interaction domain J166_00693 PF02954 Bacterial regulatory protein, Fis family J166_00696 PF07690 Major Facilitator Superfamily J166_00697 PF00588 SpoU rRNA Methylase family J166_00700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J166_00700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J166_00701 PF13784 Fic/DOC family N-terminal J166_00701 PF02661 Fic/DOC family J166_00702 PF02661 Fic/DOC family J166_00702 PF13784 Fic/DOC family N-terminal J166_00703 PF00561 alpha/beta hydrolase fold J166_00704 PF03692 Putative zinc- or iron-chelating domain J166_00705 PF00501 AMP-binding enzyme J166_00707 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J166_00709 PF01820 D-ala D-ala ligase N-terminus J166_00709 PF07478 D-ala D-ala ligase C-terminus J166_00711 PF03109 ABC1 family J166_00713 PF00849 RNA pseudouridylate synthase J166_00715 PF00472 RF-1 domain J166_00717 PF01112 Asparaginase J166_00718 PF01432 Peptidase family M3 J166_00719 PF12706 Beta-lactamase superfamily domain J166_00722 PF12833 Helix-turn-helix domain J166_00723 PF00999 Sodium/hydrogen exchanger family J166_00724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00724 PF03466 LysR substrate binding domain J166_00725 PF01274 Malate synthase J166_00726 PF00463 Isocitrate lyase family J166_00727 PF00990 Diguanylate cyclase, GGDEF domain J166_00731 PF00326 Prolyl oligopeptidase family J166_00732 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J166_00732 PF00364 Biotin-requiring enzyme J166_00732 PF00289 Biotin carboxylase, N-terminal domain J166_00732 PF02785 Biotin carboxylase C-terminal domain J166_00733 PF01039 Carboxyl transferase domain J166_00734 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_00734 PF02770 Acyl-CoA dehydrogenase, middle domain J166_00734 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_00745 PF07683 Cobalamin synthesis protein cobW C-terminal domain J166_00745 PF02492 CobW/HypB/UreG, nucleotide-binding domain J166_00749 PF03969 AFG1-like ATPase J166_00750 PF01047 MarR family J166_00751 PF02566 OsmC-like protein J166_00756 PF00107 Zinc-binding dehydrogenase J166_00756 PF16884 N-terminal domain of oxidoreductase J166_00759 PF00849 RNA pseudouridylate synthase J166_00761 PF00593 TonB dependent receptor J166_00763 PF00270 DEAD/DEAH box helicase J166_00763 PF04408 Helicase associated domain (HA2) J166_00763 PF00271 Helicase conserved C-terminal domain J166_00763 PF08482 ATP-dependent helicase C-terminal J166_00764 PF07308 Protein of unknown function (DUF1456) J166_00765 PF00576 HIUase/Transthyretin family J166_00766 PF13454 FAD-NAD(P)-binding J166_00767 PF01014 Uricase J166_00767 PF09349 OHCU decarboxylase J166_00770 PF00266 Aminotransferase class-V J166_00771 PF07687 Peptidase dimerisation domain J166_00771 PF01546 Peptidase family M20/M25/M40 J166_00772 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00772 PF03466 LysR substrate binding domain J166_00773 PF07690 Major Facilitator Superfamily J166_00776 PF01425 Amidase J166_00777 PF01156 Inosine-uridine preferring nucleoside hydrolase J166_00779 PF00860 Permease family J166_00780 PF00111 2Fe-2S iron-sulfur cluster binding domain J166_00781 PF00355 Rieske [2Fe-2S] domain J166_00782 PF03466 LysR substrate binding domain J166_00782 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00783 PF01026 TatD related DNase J166_00786 PF03466 LysR substrate binding domain J166_00786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00787 PF07690 Major Facilitator Superfamily J166_00789 PF00561 alpha/beta hydrolase fold J166_00790 PF02146 Sir2 family J166_00791 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J166_00792 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J166_00792 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J166_00794 PF00551 Formyl transferase J166_00795 PF00486 Transcriptional regulatory protein, C terminal J166_00795 PF00072 Response regulator receiver domain J166_00796 PF00672 HAMP domain J166_00796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00796 PF00512 His Kinase A (phospho-acceptor) domain J166_00797 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_00797 PF00529 HlyD membrane-fusion protein of T1SS J166_00798 PF00873 AcrB/AcrD/AcrF family J166_00799 PF02321 Outer membrane efflux protein J166_00801 PF02219 Methylenetetrahydrofolate reductase J166_00802 PF02677 Epoxyqueuosine reductase QueH J166_00803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00803 PF03466 LysR substrate binding domain J166_00804 PF03358 NADPH-dependent FMN reductase J166_00806 PF08267 Cobalamin-independent synthase, N-terminal domain J166_00806 PF01717 Cobalamin-independent synthase, Catalytic domain J166_00807 PF03812 2-keto-3-deoxygluconate permease J166_00809 PF05368 NmrA-like family J166_00810 PF01638 HxlR-like helix-turn-helix J166_00814 PF13276 HTH-like domain J166_00814 PF13333 Integrase core domain J166_00814 PF00665 Integrase core domain J166_00815 PF01527 Transposase J166_00816 PF13495 Phage integrase, N-terminal SAM-like domain J166_00816 PF00589 Phage integrase family J166_00817 PF00920 Dehydratase family J166_00820 PF00132 Bacterial transferase hexapeptide (six repeats) J166_00821 PF07690 Major Facilitator Superfamily J166_00822 PF11871 Domain of unknown function (DUF3391) J166_00822 PF01966 HD domain J166_00826 PF00171 Aldehyde dehydrogenase family J166_00828 PF01494 FAD binding domain J166_00831 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J166_00831 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J166_00832 PF00230 Major intrinsic protein J166_00833 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J166_00833 PF01266 FAD dependent oxidoreductase J166_00834 PF00455 DeoR C terminal sensor domain J166_00834 PF08220 DeoR-like helix-turn-helix domain J166_00836 PF00355 Rieske [2Fe-2S] domain J166_00837 PF01144 Coenzyme A transferase J166_00838 PF01144 Coenzyme A transferase J166_00839 PF00108 Thiolase, N-terminal domain J166_00839 PF02803 Thiolase, C-terminal domain J166_00840 PF00775 Dioxygenase J166_00840 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J166_00842 PF10397 Adenylosuccinate lyase C-terminus J166_00842 PF00206 Lyase J166_00843 PF12146 Serine aminopeptidase, S33 J166_00844 PF02627 Carboxymuconolactone decarboxylase family J166_00846 PF09339 IclR helix-turn-helix domain J166_00846 PF01614 Bacterial transcriptional regulator J166_00848 PF07859 alpha/beta hydrolase fold J166_00849 PF10677 Protein of unknown function (DUF2490) J166_00850 PF01134 Glucose inhibited division protein A J166_00850 PF13932 GidA associated domain J166_00852 PF00291 Pyridoxal-phosphate dependent enzyme J166_00856 PF13649 Methyltransferase domain J166_00858 PF12697 Alpha/beta hydrolase family J166_00860 PF00155 Aminotransferase class I and II J166_00861 PF06968 Biotin and Thiamin Synthesis associated domain J166_00861 PF04055 Radical SAM superfamily J166_00863 PF01040 UbiA prenyltransferase family J166_00867 PF05819 NolX protein J166_00875 PF01313 Bacterial export proteins, family 3 J166_00876 PF00813 FliP family J166_00879 PF00771 FHIPEP family J166_00880 PF01312 FlhB HrpN YscU SpaS Family J166_00883 PF01514 Secretory protein of YscJ/FliF family J166_00886 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J166_00886 PF02874 ATP synthase alpha/beta family, beta-barrel domain J166_00886 PF18269 T3SS EscN ATPase C-terminal domain J166_00888 PF01311 Bacterial export proteins, family 1 J166_00891 PF01464 Transglycosylase SLT domain J166_00894 PF00924 Mechanosensitive ion channel J166_00894 PF12795 Mechanosensitive ion channel porin domain J166_00894 PF12794 Mechanosensitive ion channel inner membrane domain 1 J166_00895 PF00884 Sulfatase J166_00896 PF03109 ABC1 family J166_00897 PF03109 ABC1 family J166_00898 PF05661 Protein of unknown function (DUF808) J166_00899 PF00990 Diguanylate cyclase, GGDEF domain J166_00899 PF00072 Response regulator receiver domain J166_00900 PF08323 Starch synthase catalytic domain J166_00900 PF00534 Glycosyl transferases group 1 J166_00901 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J166_00901 PF00128 Alpha amylase, catalytic domain J166_00901 PF02806 Alpha amylase, C-terminal all-beta domain J166_00902 PF00128 Alpha amylase, catalytic domain J166_00902 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J166_00902 PF11941 Domain of unknown function (DUF3459) J166_00903 PF02446 4-alpha-glucanotransferase J166_00904 PF00128 Alpha amylase, catalytic domain J166_00906 PF00128 Alpha amylase, catalytic domain J166_00906 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J166_00907 PF13460 NAD(P)H-binding J166_00910 PF06903 VirK protein J166_00911 PF02321 Outer membrane efflux protein J166_00914 PF00873 AcrB/AcrD/AcrF family J166_00917 PF00271 Helicase conserved C-terminal domain J166_00917 PF00270 DEAD/DEAH box helicase J166_00919 PF02817 e3 binding domain J166_00919 PF00364 Biotin-requiring enzyme J166_00919 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J166_00921 PF02780 Transketolase, C-terminal domain J166_00921 PF02779 Transketolase, pyrimidine binding domain J166_00922 PF00676 Dehydrogenase E1 component J166_00924 PF03301 Tryptophan 2,3-dioxygenase J166_00925 PF00854 POT family J166_00927 PF01047 MarR family J166_00928 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J166_00929 PF04209 homogentisate 1,2-dioxygenase J166_00932 PF03334 Na+/H+ antiporter subunit J166_00933 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J166_00935 PF00361 Proton-conducting membrane transporter J166_00936 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J166_00937 PF13244 Domain of unknown function (DUF4040) J166_00937 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J166_00937 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J166_00937 PF00361 Proton-conducting membrane transporter J166_00940 PF02868 Thermolysin metallopeptidase, alpha-helical domain J166_00940 PF01447 Thermolysin metallopeptidase, catalytic domain J166_00940 PF01483 Proprotein convertase P-domain J166_00940 PF07504 Fungalysin/Thermolysin Propeptide Motif J166_00942 PF00182 Chitinase class I J166_00946 PF01259 SAICAR synthetase J166_00947 PF05099 Tellurite resistance protein TerB J166_00947 PF00226 DnaJ domain J166_00949 PF00834 Ribulose-phosphate 3 epimerase family J166_00951 PF00781 Diacylglycerol kinase catalytic domain J166_00952 PF04715 Anthranilate synthase component I, N terminal region J166_00952 PF00425 chorismate binding enzyme J166_00954 PF00117 Glutamine amidotransferase class-I J166_00956 PF00591 Glycosyl transferase family, a/b domain J166_00956 PF02885 Glycosyl transferase family, helical bundle domain J166_00957 PF00218 Indole-3-glycerol phosphate synthase J166_00959 PF00027 Cyclic nucleotide-binding domain J166_00959 PF00325 Bacterial regulatory proteins, crp family J166_00960 PF02675 S-adenosylmethionine decarboxylase J166_00961 PF00893 Small Multidrug Resistance protein J166_00962 PF03232 Ubiquinone biosynthesis protein COQ7 J166_00963 PF00572 Ribosomal protein L13 J166_00964 PF00380 Ribosomal protein S9/S16 J166_00967 PF00293 NUDIX domain J166_00968 PF00210 Ferritin-like domain J166_00969 PF00672 HAMP domain J166_00969 PF00072 Response regulator receiver domain J166_00969 PF01627 Hpt domain J166_00969 PF00512 His Kinase A (phospho-acceptor) domain J166_00969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_00969 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J166_00970 PF00486 Transcriptional regulatory protein, C terminal J166_00970 PF00072 Response regulator receiver domain J166_00974 PF01521 Iron-sulphur cluster biosynthesis J166_00976 PF09297 NADH pyrophosphatase zinc ribbon domain J166_00976 PF00293 NUDIX domain J166_00976 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J166_00977 PF03186 CobD/Cbib protein J166_00977 PF17113 Regulatory signalling modulator protein AmpE J166_00980 PF07690 Major Facilitator Superfamily J166_00981 PF03466 LysR substrate binding domain J166_00981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_00982 PF07690 Major Facilitator Superfamily J166_00983 PF12805 FUSC-like inner membrane protein yccS J166_00984 PF02843 Phosphoribosylglycinamide synthetase, C domain J166_00984 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J166_00984 PF02844 Phosphoribosylglycinamide synthetase, N domain J166_00986 PF02142 MGS-like domain J166_00986 PF01808 AICARFT/IMPCHase bienzyme J166_00987 PF01066 CDP-alcohol phosphatidyltransferase J166_00988 PF12147 Putative methyltransferase J166_00988 PF12146 Serine aminopeptidase, S33 J166_00989 PF00782 Dual specificity phosphatase, catalytic domain J166_00995 PF02954 Bacterial regulatory protein, Fis family J166_00998 PF01381 Helix-turn-helix J166_01004 PF02785 Biotin carboxylase C-terminal domain J166_01004 PF00289 Biotin carboxylase, N-terminal domain J166_01004 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J166_01006 PF00364 Biotin-requiring enzyme J166_01007 PF01220 Dehydroquinase class II J166_01008 PF02683 Cytochrome C biogenesis protein transmembrane region J166_01008 PF11412 Disulphide bond corrector protein DsbC J166_01009 PF03091 CutA1 divalent ion tolerance protein J166_01012 PF01852 START domain J166_01014 PF00106 short chain dehydrogenase J166_01015 PF04231 Endonuclease I J166_01016 PF00166 Chaperonin 10 Kd subunit J166_01017 PF00118 TCP-1/cpn60 chaperonin family J166_01019 PF00593 TonB dependent receptor J166_01019 PF07715 TonB-dependent Receptor Plug Domain J166_01020 PF00793 DAHP synthetase I family J166_01023 PF08450 SMP-30/Gluconolactonase/LRE-like region J166_01025 PF08335 GlnD PII-uridylyltransferase J166_01025 PF03710 Glutamate-ammonia ligase adenylyltransferase J166_01026 PF02592 Putative vitamin uptake transporter J166_01029 PF00881 Nitroreductase family J166_01030 PF04264 YceI-like domain J166_01034 PF16957 Malonate decarboxylase, alpha subunit, transporter J166_01035 PF06857 Malonate decarboxylase delta subunit (MdcD) J166_01036 PF01039 Carboxyl transferase domain J166_01038 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J166_01039 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J166_01041 PF00698 Acyl transferase domain J166_01043 PF00392 Bacterial regulatory proteins, gntR family J166_01043 PF07729 FCD domain J166_01044 PF13419 Haloacid dehalogenase-like hydrolase J166_01050 PF07745 Glycosyl hydrolase family 53 J166_01051 PF00456 Transketolase, thiamine diphosphate binding domain J166_01051 PF17831 Pyruvate dehydrogenase E1 component middle domain J166_01052 PF13276 HTH-like domain J166_01052 PF00665 Integrase core domain J166_01052 PF13333 Integrase core domain J166_01053 PF01527 Transposase J166_01054 PF00106 short chain dehydrogenase J166_01057 PF00106 short chain dehydrogenase J166_01059 PF13409 Glutathione S-transferase, N-terminal domain J166_01065 PF01527 Transposase J166_01066 PF13276 HTH-like domain J166_01066 PF00665 Integrase core domain J166_01066 PF13333 Integrase core domain J166_01068 PF01433 Peptidase family M1 domain J166_01068 PF11838 ERAP1-like C-terminal domain J166_01070 PF00588 SpoU rRNA Methylase family J166_01070 PF08032 RNA 2'-O ribose methyltransferase substrate binding J166_01071 PF00135 Carboxylesterase family J166_01073 PF10566 Glycoside hydrolase 97 J166_01073 PF14508 Glycosyl-hydrolase 97 N-terminal J166_01073 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J166_01074 PF02837 Glycosyl hydrolases family 2, sugar binding domain J166_01074 PF00703 Glycosyl hydrolases family 2 J166_01074 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J166_01076 PF00356 Bacterial regulatory proteins, lacI family J166_01078 PF01741 Large-conductance mechanosensitive channel, MscL J166_01079 PF01557 Fumarylacetoacetate (FAA) hydrolase family J166_01082 PF03600 Citrate transporter J166_01082 PF02080 TrkA-C domain J166_01083 PF02390 Putative methyltransferase J166_01084 PF05690 Thiazole biosynthesis protein ThiG J166_01086 PF03797 Autotransporter beta-domain J166_01086 PF00657 GDSL-like Lipase/Acylhydrolase J166_01091 PF05593 RHS Repeat J166_01091 PF03527 RHS protein J166_01097 PF05973 Phage derived protein Gp49-like (DUF891) J166_01105 PF04002 RadC-like JAB domain J166_01111 PF01555 DNA methylase J166_01116 PF02796 Helix-turn-helix domain of resolvase J166_01116 PF00665 Integrase core domain J166_01117 PF01695 IstB-like ATP binding protein J166_01127 PF00128 Alpha amylase, catalytic domain J166_01127 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J166_01128 PF08443 RimK-like ATP-grasp domain J166_01128 PF18030 RimK PreATP-grasp domain J166_01129 PF08443 RimK-like ATP-grasp domain J166_01129 PF18030 RimK PreATP-grasp domain J166_01131 PF00486 Transcriptional regulatory protein, C terminal J166_01131 PF00072 Response regulator receiver domain J166_01132 PF00512 His Kinase A (phospho-acceptor) domain J166_01132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01132 PF16736 Single Cache-like J166_01132 PF00989 PAS fold J166_01133 PF00665 Integrase core domain J166_01133 PF13276 HTH-like domain J166_01133 PF13333 Integrase core domain J166_01134 PF01527 Transposase J166_01137 PF01121 Dephospho-CoA kinase J166_01138 PF06750 Bacterial Peptidase A24 N-terminal domain J166_01138 PF01478 Type IV leader peptidase family J166_01139 PF00482 Type II secretion system (T2SS), protein F J166_01140 PF00482 Type II secretion system (T2SS), protein F J166_01141 PF00114 Pilin (bacterial filament) J166_01141 PF07963 Prokaryotic N-terminal methylation motif J166_01142 PF07963 Prokaryotic N-terminal methylation motif J166_01142 PF00114 Pilin (bacterial filament) J166_01143 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J166_01143 PF00437 Type II/IV secretion system protein J166_01144 PF00437 Type II/IV secretion system protein J166_01144 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J166_01146 PF02954 Bacterial regulatory protein, Fis family J166_01146 PF00072 Response regulator receiver domain J166_01146 PF00158 Sigma-54 interaction domain J166_01147 PF00512 His Kinase A (phospho-acceptor) domain J166_01147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01148 PF00549 CoA-ligase J166_01148 PF08442 ATP-grasp domain J166_01149 PF02629 CoA binding domain J166_01149 PF00549 CoA-ligase J166_01154 PF01129 NAD:arginine ADP-ribosyltransferase J166_01155 PF02796 Helix-turn-helix domain of resolvase J166_01155 PF00665 Integrase core domain J166_01166 PF01527 Transposase J166_01167 PF00665 Integrase core domain J166_01167 PF13276 HTH-like domain J166_01167 PF13333 Integrase core domain J166_01203 PF02954 Bacterial regulatory protein, Fis family J166_01203 PF00072 Response regulator receiver domain J166_01203 PF00158 Sigma-54 interaction domain J166_01204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01204 PF13426 PAS domain J166_01204 PF00072 Response regulator receiver domain J166_01219 PF01695 IstB-like ATP binding protein J166_01221 PF13438 Domain of unknown function (DUF4113) J166_01221 PF00817 impB/mucB/samB family J166_01221 PF11798 IMS family HHH motif J166_01221 PF11799 impB/mucB/samB family C-terminal domain J166_01222 PF00717 Peptidase S24-like J166_01223 PF01339 CheB methylesterase J166_01223 PF00072 Response regulator receiver domain J166_01224 PF00512 His Kinase A (phospho-acceptor) domain J166_01224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01224 PF00989 PAS fold J166_01227 PF05698 Bacterial trigger factor protein (TF) C-terminus J166_01227 PF05697 Bacterial trigger factor protein (TF) J166_01228 PF00574 Clp protease J166_01229 PF07724 AAA domain (Cdc48 subfamily) J166_01229 PF10431 C-terminal, D2-small domain, of ClpB protein J166_01229 PF06689 ClpX C4-type zinc finger J166_01230 PF00004 ATPase family associated with various cellular activities (AAA) J166_01230 PF02190 ATP-dependent protease La (LON) substrate-binding domain J166_01230 PF05362 Lon protease (S16) C-terminal proteolytic domain J166_01231 PF00216 Bacterial DNA-binding protein J166_01237 PF05257 CHAP domain J166_01237 PF01476 LysM domain J166_01238 PF00753 Metallo-beta-lactamase superfamily J166_01238 PF16123 Hydroxyacylglutathione hydrolase C-terminus J166_01240 PF00075 RNase H J166_01241 PF00929 Exonuclease J166_01245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J166_01247 PF12706 Beta-lactamase superfamily domain J166_01247 PF00753 Metallo-beta-lactamase superfamily J166_01248 PF04055 Radical SAM superfamily J166_01248 PF06463 Molybdenum Cofactor Synthesis C J166_01249 PF01967 MoaC family J166_01250 PF02597 ThiS family J166_01251 PF02391 MoaE protein J166_01254 PF01527 Transposase J166_01255 PF00665 Integrase core domain J166_01255 PF13333 Integrase core domain J166_01255 PF13276 HTH-like domain J166_01261 PF12169 DNA polymerase III subunits gamma and tau domain III J166_01261 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J166_01261 PF12170 DNA polymerase III tau subunit V interacting with alpha J166_01262 PF02575 YbaB/EbfC DNA-binding family J166_01263 PF13662 Toprim domain J166_01263 PF02132 RecR protein J166_01264 PF01230 HIT domain J166_01266 PF13559 Domain of unknown function (DUF4129) J166_01266 PF11992 Domain of unknown function (DUF3488) J166_01266 PF01841 Transglutaminase-like superfamily J166_01268 PF17863 AAA lid domain J166_01268 PF07726 ATPase family associated with various cellular activities (AAA) J166_01273 PF02545 Maf-like protein J166_01274 PF02620 Large ribosomal RNA subunit accumulation protein YceD J166_01275 PF01783 Ribosomal L32p protein family J166_01276 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J166_01276 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J166_01278 PF00698 Acyl transferase domain J166_01280 PF00550 Phosphopantetheine attachment site J166_01281 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_01281 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_01282 PF04715 Anthranilate synthase component I, N terminal region J166_01282 PF00425 chorismate binding enzyme J166_01283 PF02618 YceG-like family J166_01284 PF09115 DNA polymerase III, delta subunit, C terminal J166_01288 PF02954 Bacterial regulatory protein, Fis family J166_01288 PF06506 Propionate catabolism activator J166_01288 PF00158 Sigma-54 interaction domain J166_01290 PF00285 Citrate synthase, C-terminal domain J166_01291 PF00694 Aconitase C-terminal domain J166_01291 PF00330 Aconitase family (aconitate hydratase) J166_01292 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J166_01294 PF04303 PrpF protein J166_01295 PF00593 TonB dependent receptor J166_01295 PF07715 TonB-dependent Receptor Plug Domain J166_01297 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J166_01297 PF07703 Alpha-2-macroglobulin bait region domain J166_01297 PF01835 MG2 domain J166_01297 PF17962 Bacterial macroglobulin domain 6 J166_01297 PF00207 Alpha-2-macroglobulin family J166_01297 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J166_01297 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J166_01297 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J166_01300 PF00912 Transglycosylase J166_01300 PF06832 Penicillin-Binding Protein C-terminus Family J166_01300 PF00905 Penicillin binding protein transpeptidase domain J166_01302 PF08534 Redoxin J166_01304 PF00226 DnaJ domain J166_01304 PF01556 DnaJ C terminal domain J166_01306 PF00072 Response regulator receiver domain J166_01308 PF12221 Bacterial membrane protein N terminal J166_01308 PF01145 SPFH domain / Band 7 family J166_01309 PF01145 SPFH domain / Band 7 family J166_01312 PF00709 Adenylosuccinate synthetase J166_01313 PF11838 ERAP1-like C-terminal domain J166_01313 PF01433 Peptidase family M1 domain J166_01316 PF00440 Bacterial regulatory proteins, tetR family J166_01329 PF00300 Histidine phosphatase superfamily (branch 1) J166_01329 PF13456 Reverse transcriptase-like J166_01330 PF01256 Carbohydrate kinase J166_01332 PF00723 Glycosyl hydrolases family 15 J166_01334 PF07971 Glycosyl hydrolase family 92 J166_01334 PF17678 Glycosyl hydrolase family 92 N-terminal domain J166_01338 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_01342 PF17755 UvrA DNA-binding domain J166_01343 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J166_01343 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J166_01344 PF00941 FAD binding domain in molybdopterin dehydrogenase J166_01344 PF03450 CO dehydrogenase flavoprotein C-terminal domain J166_01345 PF00111 2Fe-2S iron-sulfur cluster binding domain J166_01345 PF01799 [2Fe-2S] binding domain J166_01352 PF00717 Peptidase S24-like J166_01352 PF01726 LexA DNA binding domain J166_01355 PF14579 Helix-hairpin-helix motif J166_01355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J166_01355 PF07733 Bacterial DNA polymerase III alpha NTPase domain J166_01355 PF02811 PHP domain J166_01356 PF00326 Prolyl oligopeptidase family J166_01358 PF03169 OPT oligopeptide transporter protein J166_01361 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J166_01361 PF07676 WD40-like Beta Propeller Repeat J166_01361 PF00326 Prolyl oligopeptidase family J166_01364 PF12833 Helix-turn-helix domain J166_01364 PF02311 AraC-like ligand binding domain J166_01369 PF17757 UvrB interaction domain J166_01369 PF00270 DEAD/DEAH box helicase J166_01369 PF02559 CarD-like/TRCF domain J166_01369 PF00271 Helicase conserved C-terminal domain J166_01369 PF03461 TRCF domain J166_01371 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J166_01372 PF00072 Response regulator receiver domain J166_01372 PF00486 Transcriptional regulatory protein, C terminal J166_01373 PF00672 HAMP domain J166_01373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01373 PF00512 His Kinase A (phospho-acceptor) domain J166_01375 PF06123 Inner membrane protein CreD J166_01380 PF00749 tRNA synthetases class I (E and Q), catalytic domain J166_01381 PF01475 Ferric uptake regulator family J166_01383 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_01383 PF00529 HlyD membrane-fusion protein of T1SS J166_01384 PF00873 AcrB/AcrD/AcrF family J166_01385 PF02321 Outer membrane efflux protein J166_01386 PF00440 Bacterial regulatory proteins, tetR family J166_01386 PF16859 Tetracyclin repressor-like, C-terminal domain J166_01388 PF06719 AraC-type transcriptional regulator N-terminus J166_01388 PF12833 Helix-turn-helix domain J166_01390 PF03466 LysR substrate binding domain J166_01390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01391 PF07690 Major Facilitator Superfamily J166_01392 PF00248 Aldo/keto reductase family J166_01394 PF01483 Proprotein convertase P-domain J166_01394 PF00082 Subtilase family J166_01396 PF00082 Subtilase family J166_01396 PF01483 Proprotein convertase P-domain J166_01398 PF07715 TonB-dependent Receptor Plug Domain J166_01398 PF00593 TonB dependent receptor J166_01401 PF00107 Zinc-binding dehydrogenase J166_01401 PF08240 Alcohol dehydrogenase GroES-like domain J166_01402 PF00654 Voltage gated chloride channel J166_01404 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J166_01404 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J166_01414 PF03880 DbpA RNA binding domain J166_01414 PF00270 DEAD/DEAH box helicase J166_01414 PF00271 Helicase conserved C-terminal domain J166_01415 PF00563 EAL domain J166_01415 PF00990 Diguanylate cyclase, GGDEF domain J166_01415 PF08448 PAS fold J166_01416 PF01479 S4 domain J166_01416 PF00849 RNA pseudouridylate synthase J166_01417 PF00990 Diguanylate cyclase, GGDEF domain J166_01417 PF00072 Response regulator receiver domain J166_01420 PF03737 Aldolase/RraA J166_01421 PF00144 Beta-lactamase J166_01422 PF00999 Sodium/hydrogen exchanger family J166_01423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01423 PF00512 His Kinase A (phospho-acceptor) domain J166_01423 PF00672 HAMP domain J166_01424 PF00486 Transcriptional regulatory protein, C terminal J166_01424 PF00072 Response regulator receiver domain J166_01425 PF02321 Outer membrane efflux protein J166_01428 PF00873 AcrB/AcrD/AcrF family J166_01431 PF00005 ABC transporter J166_01431 PF00664 ABC transporter transmembrane region J166_01437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01437 PF03466 LysR substrate binding domain J166_01439 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J166_01440 PF04070 Domain of unknown function (DUF378) J166_01445 PF00085 Thioredoxin J166_01447 PF00133 tRNA synthetases class I (I, L, M and V) J166_01447 PF13603 Leucyl-tRNA synthetase, Domain 2 J166_01447 PF08264 Anticodon-binding domain of tRNA J166_01450 PF01467 Cytidylyltransferase-like J166_01453 PF02590 Predicted SPOUT methyltransferase J166_01456 PF04402 Protein of unknown function (DUF541) J166_01457 PF02545 Maf-like protein J166_01458 PF10150 Ribonuclease E/G family J166_01458 PF00575 S1 RNA binding domain J166_01459 PF13502 AsmA-like C-terminal region J166_01459 PF13116 Protein of unknown function J166_01461 PF01523 Putative modulator of DNA gyrase J166_01462 PF04751 Protein of unknown function (DUF615) J166_01463 PF01523 Putative modulator of DNA gyrase J166_01465 PF14521 Lysine-specific metallo-endopeptidase J166_01466 PF00348 Polyprenyl synthetase J166_01467 PF02609 Exonuclease VII small subunit J166_01468 PF11734 TilS substrate C-terminal domain J166_01468 PF09179 TilS substrate binding domain J166_01468 PF01171 PP-loop family J166_01469 PF00245 Alkaline phosphatase J166_01470 PF00375 Sodium:dicarboxylate symporter family J166_01473 PF00877 NlpC/P60 family J166_01474 PF00877 NlpC/P60 family J166_01475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J166_01476 PF04235 Protein of unknown function (DUF418) J166_01477 PF01266 FAD dependent oxidoreductase J166_01478 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J166_01478 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_01479 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J166_01482 PF01431 Peptidase family M13 J166_01482 PF05649 Peptidase family M13 J166_01483 PF01431 Peptidase family M13 J166_01483 PF05649 Peptidase family M13 J166_01486 PF00593 TonB dependent receptor J166_01486 PF07715 TonB-dependent Receptor Plug Domain J166_01487 PF10609 NUBPL iron-transfer P-loop NTPase J166_01488 PF00692 dUTPase J166_01492 PF01738 Dienelactone hydrolase family J166_01493 PF04055 Radical SAM superfamily J166_01493 PF00919 Uncharacterized protein family UPF0004 J166_01493 PF18693 TRAM domain J166_01494 PF01272 Transcription elongation factor, GreA/GreB, C-term J166_01494 PF03449 Transcription elongation factor, N-terminal J166_01497 PF00293 NUDIX domain J166_01498 PF05872 Bacterial protein of unknown function (DUF853) J166_01500 PF02666 Phosphatidylserine decarboxylase J166_01501 PF02630 SCO1/SenC J166_01502 PF05175 Methyltransferase small domain J166_01503 PF01264 Chorismate synthase J166_01504 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J166_01504 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J166_01505 PF02774 Semialdehyde dehydrogenase, dimerisation domain J166_01505 PF01118 Semialdehyde dehydrogenase, NAD binding domain J166_01509 PF01416 tRNA pseudouridine synthase J166_01510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J166_01511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01511 PF03466 LysR substrate binding domain J166_01512 PF00291 Pyridoxal-phosphate dependent enzyme J166_01514 PF00290 Tryptophan synthase alpha chain J166_01515 PF17848 Acetyl-coA carboxylase zinc finger domain J166_01515 PF01039 Carboxyl transferase domain J166_01516 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J166_01516 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J166_01516 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J166_01516 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J166_01519 PF00990 Diguanylate cyclase, GGDEF domain J166_01519 PF00563 EAL domain J166_01519 PF03707 Bacterial signalling protein N terminal repeat J166_01522 PF00106 short chain dehydrogenase J166_01523 PF00121 Triosephosphate isomerase J166_01526 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J166_01527 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J166_01528 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J166_01529 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J166_01531 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J166_01531 PF10531 SLBB domain J166_01531 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J166_01532 PF00384 Molybdopterin oxidoreductase J166_01532 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J166_01532 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J166_01533 PF00146 NADH dehydrogenase J166_01534 PF12838 4Fe-4S dicluster domain J166_01535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J166_01536 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J166_01537 PF00361 Proton-conducting membrane transporter J166_01537 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J166_01538 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J166_01538 PF00361 Proton-conducting membrane transporter J166_01539 PF00361 Proton-conducting membrane transporter J166_01541 PF02576 RimP N-terminal domain J166_01541 PF17384 RimP C-terminal SH3 domain J166_01542 PF13184 NusA-like KH domain J166_01542 PF08529 NusA N-terminal domain J166_01542 PF00575 S1 RNA binding domain J166_01543 PF08364 Bacterial translation initiation factor IF-2 associated region J166_01543 PF11987 Translation-initiation factor 2 J166_01543 PF04760 Translation initiation factor IF-2, N-terminal region J166_01543 PF00009 Elongation factor Tu GTP binding domain J166_01544 PF02033 Ribosome-binding factor A J166_01545 PF01509 TruB family pseudouridylate synthase (N terminal domain) J166_01545 PF16198 tRNA pseudouridylate synthase B C-terminal domain J166_01545 PF09157 Pseudouridine synthase II TruB, C-terminal J166_01546 PF00312 Ribosomal protein S15 J166_01547 PF00013 KH domain J166_01547 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J166_01547 PF01138 3' exoribonuclease family, domain 1 J166_01547 PF00575 S1 RNA binding domain J166_01547 PF03725 3' exoribonuclease family, domain 2 J166_01549 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J166_01549 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J166_01551 PF00731 AIR carboxylase J166_01552 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J166_01552 PF02222 ATP-grasp domain J166_01553 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J166_01553 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J166_01554 PF00462 Glutaredoxin J166_01556 PF01914 MarC family integral membrane protein J166_01557 PF00593 TonB dependent receptor J166_01558 PF03641 Possible lysine decarboxylase J166_01558 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J166_01558 PF11892 Domain of unknown function (DUF3412) J166_01559 PF07694 5TMR of 5TMR-LYT J166_01559 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01559 PF06580 Histidine kinase J166_01563 PF05567 Neisseria PilC beta-propeller domain J166_01564 PF00114 Pilin (bacterial filament) J166_01564 PF07963 Prokaryotic N-terminal methylation motif J166_01565 PF01527 Transposase J166_01566 PF13276 HTH-like domain J166_01566 PF00665 Integrase core domain J166_01566 PF13333 Integrase core domain J166_01572 PF04002 RadC-like JAB domain J166_01573 PF05284 Protein of unknown function (DUF736) J166_01574 PF01381 Helix-turn-helix J166_01575 PF01527 Transposase J166_01576 PF00665 Integrase core domain J166_01576 PF13276 HTH-like domain J166_01576 PF13333 Integrase core domain J166_01577 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J166_01578 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J166_01578 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J166_01578 PF00361 Proton-conducting membrane transporter J166_01579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01579 PF03466 LysR substrate binding domain J166_01582 PF00072 Response regulator receiver domain J166_01582 PF00196 Bacterial regulatory proteins, luxR family J166_01585 PF00857 Isochorismatase family J166_01587 PF07969 Amidohydrolase family J166_01588 PF05977 Transmembrane secretion effector J166_01591 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J166_01591 PF10414 Sirohaem synthase dimerisation region J166_01591 PF14824 Sirohaem biosynthesis protein central J166_01593 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J166_01595 PF05974 Domain of unknown function (DUF892) J166_01598 PF00563 EAL domain J166_01598 PF00990 Diguanylate cyclase, GGDEF domain J166_01598 PF08448 PAS fold J166_01598 PF08447 PAS fold J166_01599 PF12951 Passenger-associated-transport-repeat J166_01599 PF12951 Passenger-associated-transport-repeat J166_01600 PF00196 Bacterial regulatory proteins, luxR family J166_01600 PF00072 Response regulator receiver domain J166_01601 PF13426 PAS domain J166_01601 PF08448 PAS fold J166_01601 PF00512 His Kinase A (phospho-acceptor) domain J166_01601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01601 PF00072 Response regulator receiver domain J166_01603 PF00873 AcrB/AcrD/AcrF family J166_01604 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_01605 PF03797 Autotransporter beta-domain J166_01605 PF00082 Subtilase family J166_01607 PF06580 Histidine kinase J166_01607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01607 PF07694 5TMR of 5TMR-LYT J166_01608 PF00072 Response regulator receiver domain J166_01608 PF04397 LytTr DNA-binding domain J166_01609 PF00144 Beta-lactamase J166_01611 PF07995 Glucose / Sorbosone dehydrogenase J166_01612 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J166_01614 PF09335 SNARE associated Golgi protein J166_01615 PF01494 FAD binding domain J166_01616 PF01527 Transposase J166_01617 PF13333 Integrase core domain J166_01617 PF00665 Integrase core domain J166_01617 PF13276 HTH-like domain J166_01627 PF17091 Inovirus G7P protein J166_01633 PF00106 short chain dehydrogenase J166_01635 PF08241 Methyltransferase domain J166_01635 PF12697 Alpha/beta hydrolase family J166_01644 PF01106 NifU-like domain J166_01645 PF01329 Pterin 4 alpha carbinolamine dehydratase J166_01647 PF02535 ZIP Zinc transporter J166_01648 PF11737 Protein of unknown function (DUF3300) J166_01649 PF01479 S4 domain J166_01649 PF00849 RNA pseudouridylate synthase J166_01650 PF12111 Polyribonucleotide phosphorylase C terminal J166_01650 PF00575 S1 RNA binding domain J166_01650 PF10150 Ribonuclease E/G family J166_01651 PF00072 Response regulator receiver domain J166_01651 PF00196 Bacterial regulatory proteins, luxR family J166_01654 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J166_01656 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J166_01656 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J166_01656 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J166_01658 PF00589 Phage integrase family J166_01659 PF01527 Transposase J166_01660 PF13276 HTH-like domain J166_01660 PF00665 Integrase core domain J166_01660 PF13333 Integrase core domain J166_01661 PF01527 Transposase J166_01663 PF13193 AMP-binding enzyme C-terminal domain J166_01663 PF00668 Condensation domain J166_01663 PF00501 AMP-binding enzyme J166_01663 PF00975 Thioesterase domain J166_01663 PF00550 Phosphopantetheine attachment site J166_01664 PF13193 AMP-binding enzyme C-terminal domain J166_01664 PF00550 Phosphopantetheine attachment site J166_01664 PF00501 AMP-binding enzyme J166_01664 PF00668 Condensation domain J166_01667 PF05598 Transposase domain (DUF772) J166_01667 PF01609 Transposase DDE domain J166_01672 PF05598 Transposase domain (DUF772) J166_01672 PF01609 Transposase DDE domain J166_01673 PF00665 Integrase core domain J166_01673 PF02796 Helix-turn-helix domain of resolvase J166_01674 PF01695 IstB-like ATP binding protein J166_01675 PF01609 Transposase DDE domain J166_01675 PF05598 Transposase domain (DUF772) J166_01681 PF18337 RapA N-terminal Tudor like domain J166_01681 PF00271 Helicase conserved C-terminal domain J166_01681 PF18339 RapA N-terminal Tudor like domain 1 J166_01681 PF12137 RNA polymerase recycling family C-terminal J166_01681 PF00176 SNF2 family N-terminal domain J166_01682 PF01695 IstB-like ATP binding protein J166_01683 PF02796 Helix-turn-helix domain of resolvase J166_01683 PF00665 Integrase core domain J166_01684 PF18337 RapA N-terminal Tudor like domain J166_01684 PF18339 RapA N-terminal Tudor like domain 1 J166_01684 PF00271 Helicase conserved C-terminal domain J166_01684 PF12137 RNA polymerase recycling family C-terminal J166_01684 PF00176 SNF2 family N-terminal domain J166_01685 PF00145 C-5 cytosine-specific DNA methylase J166_01687 PF01695 IstB-like ATP binding protein J166_01688 PF02796 Helix-turn-helix domain of resolvase J166_01688 PF00665 Integrase core domain J166_01690 PF13614 AAA domain J166_01697 PF00436 Single-strand binding protein family J166_01698 PF01131 DNA topoisomerase J166_01698 PF01751 Toprim domain J166_01699 PF00145 C-5 cytosine-specific DNA methylase J166_01703 PF02021 Uncharacterised protein family UPF0102 J166_01711 PF13936 Helix-turn-helix domain J166_01711 PF00665 Integrase core domain J166_01739 PF04002 RadC-like JAB domain J166_01750 PF13340 Putative transposase of IS4/5 family (DUF4096) J166_01754 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J166_01759 PF13340 Putative transposase of IS4/5 family (DUF4096) J166_01761 PF05598 Transposase domain (DUF772) J166_01762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01762 PF03466 LysR substrate binding domain J166_01763 PF01381 Helix-turn-helix J166_01766 PF01695 IstB-like ATP binding protein J166_01767 PF02796 Helix-turn-helix domain of resolvase J166_01767 PF00665 Integrase core domain J166_01768 PF00589 Phage integrase family J166_01768 PF13356 Arm DNA-binding domain J166_01770 PF01066 CDP-alcohol phosphatidyltransferase J166_01771 PF08459 UvrC Helix-hairpin-helix N-terminal J166_01771 PF02151 UvrB/uvrC motif J166_01771 PF01541 GIY-YIG catalytic domain J166_01773 PF01451 Low molecular weight phosphotyrosine protein phosphatase J166_01774 PF02348 Cytidylyltransferase J166_01775 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J166_01776 PF00005 ABC transporter J166_01776 PF00664 ABC transporter transmembrane region J166_01778 PF01618 MotA/TolQ/ExbB proton channel family J166_01779 PF00753 Metallo-beta-lactamase superfamily J166_01779 PF03772 Competence protein J166_01781 PF00005 ABC transporter J166_01782 PF12704 MacB-like periplasmic core domain J166_01782 PF02687 FtsX-like permease family J166_01784 PF03937 Flavinator of succinate dehydrogenase J166_01785 PF13085 2Fe-2S iron-sulfur cluster binding domain J166_01787 PF02910 Fumarate reductase flavoprotein C-term J166_01787 PF00890 FAD binding domain J166_01788 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J166_01789 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J166_01792 PF00005 ABC transporter J166_01792 PF17912 MalK OB fold domain J166_01793 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J166_01793 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J166_01794 PF02685 Glucokinase J166_01795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J166_01796 PF00920 Dehydratase family J166_01797 PF01081 KDPG and KHG aldolase J166_01798 PF00873 AcrB/AcrD/AcrF family J166_01799 PF00873 AcrB/AcrD/AcrF family J166_01800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_01802 PF00034 Cytochrome c J166_01810 PF09308 LuxQ, periplasmic J166_01810 PF00512 His Kinase A (phospho-acceptor) domain J166_01810 PF00072 Response regulator receiver domain J166_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01811 PF16921 Tex protein YqgF-like domain J166_01811 PF17674 HHH domain J166_01811 PF00575 S1 RNA binding domain J166_01811 PF09371 Tex-like protein N-terminal domain J166_01813 PF00355 Rieske [2Fe-2S] domain J166_01813 PF01266 FAD dependent oxidoreductase J166_01816 PF00561 alpha/beta hydrolase fold J166_01818 PF01066 CDP-alcohol phosphatidyltransferase J166_01822 PF03618 Kinase/pyrophosphorylase J166_01823 PF00391 PEP-utilising enzyme, mobile domain J166_01823 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J166_01823 PF02896 PEP-utilising enzyme, TIM barrel domain J166_01824 PF00924 Mechanosensitive ion channel J166_01824 PF05552 Conserved TM helix J166_01825 PF00929 Exonuclease J166_01826 PF14437 MafB19-like deaminase J166_01827 PF01325 Iron dependent repressor, N-terminal DNA binding domain J166_01827 PF02742 Iron dependent repressor, metal binding and dimerisation domain J166_01828 PF01566 Natural resistance-associated macrophage protein J166_01829 PF00561 alpha/beta hydrolase fold J166_01831 PF12804 MobA-like NTP transferase domain J166_01832 PF00994 Probable molybdopterin binding domain J166_01832 PF03454 MoeA C-terminal region (domain IV) J166_01832 PF03453 MoeA N-terminal region (domain I and II) J166_01834 PF03372 Endonuclease/Exonuclease/phosphatase family J166_01836 PF00107 Zinc-binding dehydrogenase J166_01836 PF13823 Alcohol dehydrogenase GroES-associated J166_01836 PF08240 Alcohol dehydrogenase GroES-like domain J166_01841 PF00899 ThiF family J166_01842 PF00994 Probable molybdopterin binding domain J166_01842 PF03453 MoeA N-terminal region (domain I and II) J166_01842 PF03454 MoeA C-terminal region (domain IV) J166_01843 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J166_01843 PF01926 50S ribosome-binding GTPase J166_01844 PF13360 PQQ-like domain J166_01844 PF01011 PQQ enzyme repeat J166_01846 PF13464 Domain of unknown function (DUF4115) J166_01848 PF04055 Radical SAM superfamily J166_01849 PF00334 Nucleoside diphosphate kinase J166_01851 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J166_01851 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J166_01851 PF00378 Enoyl-CoA hydratase/isomerase J166_01852 PF02803 Thiolase, C-terminal domain J166_01852 PF00108 Thiolase, N-terminal domain J166_01854 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J166_01856 PF16193 AAA C-terminal domain J166_01856 PF12002 MgsA AAA+ ATPase C terminal J166_01856 PF00004 ATPase family associated with various cellular activities (AAA) J166_01858 PF03548 Outer membrane lipoprotein carrier protein LolA J166_01860 PF09397 Ftsk gamma domain J166_01860 PF01580 FtsK/SpoIIIE family J166_01860 PF17854 FtsK alpha domain J166_01860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J166_01861 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_01863 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J166_01864 PF01176 Translation initiation factor 1A / IF-1 J166_01865 PF10431 C-terminal, D2-small domain, of ClpB protein J166_01865 PF07724 AAA domain (Cdc48 subfamily) J166_01865 PF00004 ATPase family associated with various cellular activities (AAA) J166_01865 PF02861 Clp amino terminal domain, pathogenicity island component J166_01865 PF17871 AAA lid domain J166_01866 PF02617 ATP-dependent Clp protease adaptor protein ClpS J166_01867 PF00293 NUDIX domain J166_01869 PF04356 Protein of unknown function (DUF489) J166_01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_01870 PF00672 HAMP domain J166_01870 PF12729 Four helix bundle sensory module for signal transduction J166_01872 PF00563 EAL domain J166_01872 PF00990 Diguanylate cyclase, GGDEF domain J166_01872 PF03707 Bacterial signalling protein N terminal repeat J166_01873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01873 PF07730 Histidine kinase J166_01874 PF03707 Bacterial signalling protein N terminal repeat J166_01874 PF00990 Diguanylate cyclase, GGDEF domain J166_01874 PF00563 EAL domain J166_01875 PF13426 PAS domain J166_01875 PF13188 PAS domain J166_01875 PF00512 His Kinase A (phospho-acceptor) domain J166_01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01875 PF00989 PAS fold J166_01879 PF01584 CheW-like domain J166_01879 PF00072 Response regulator receiver domain J166_01881 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J166_01881 PF00460 Flagella basal body rod protein J166_01882 PF03963 Flagellar hook capping protein - N-terminal region J166_01883 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J166_01883 PF00460 Flagella basal body rod protein J166_01883 PF07559 Flagellar basal body protein FlaE J166_01884 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J166_01884 PF00460 Flagella basal body rod protein J166_01885 PF00460 Flagella basal body rod protein J166_01885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J166_01886 PF02107 Flagellar L-ring protein J166_01887 PF02119 Flagellar P-ring protein J166_01888 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J166_01888 PF10135 Rod binding protein J166_01889 PF07196 Flagellin hook IN motif J166_01889 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J166_01890 PF00700 Bacterial flagellin C-terminal helical region J166_01890 PF00669 Bacterial flagellin N-terminal helical region J166_01891 PF00700 Bacterial flagellin C-terminal helical region J166_01891 PF00669 Bacterial flagellin N-terminal helical region J166_01892 PF02465 Flagellar hook-associated protein 2 N-terminus J166_01892 PF07195 Flagellar hook-associated protein 2 C-terminus J166_01892 PF07196 Flagellin hook IN motif J166_01893 PF02561 Flagellar protein FliS J166_01896 PF00196 Bacterial regulatory proteins, luxR family J166_01896 PF00072 Response regulator receiver domain J166_01897 PF00309 Sigma-54 factor, Activator interacting domain (AID) J166_01897 PF04963 Sigma-54 factor, core binding domain J166_01897 PF04552 Sigma-54, DNA binding domain J166_01898 PF00072 Response regulator receiver domain J166_01898 PF01339 CheB methylesterase J166_01899 PF00158 Sigma-54 interaction domain J166_01899 PF00072 Response regulator receiver domain J166_01899 PF02954 Bacterial regulatory protein, Fis family J166_01900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J166_01902 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J166_01902 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J166_01910 PF00534 Glycosyl transferases group 1 J166_01910 PF00535 Glycosyl transferase family 2 J166_01911 PF02049 Flagellar hook-basal body complex protein FliE J166_01912 PF01514 Secretory protein of YscJ/FliF family J166_01912 PF08345 Flagellar M-ring protein C-terminal J166_01913 PF14841 FliG middle domain J166_01913 PF01706 FliG C-terminal domain J166_01913 PF14842 FliG N-terminal domain J166_01915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J166_01915 PF18269 T3SS EscN ATPase C-terminal domain J166_01919 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J166_01919 PF02154 Flagellar motor switch protein FliM J166_01920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J166_01921 PF04347 Flagellar biosynthesis protein, FliO J166_01922 PF00813 FliP family J166_01925 PF01313 Bacterial export proteins, family 3 J166_01926 PF01311 Bacterial export proteins, family 1 J166_01927 PF13188 PAS domain J166_01927 PF03707 Bacterial signalling protein N terminal repeat J166_01927 PF00990 Diguanylate cyclase, GGDEF domain J166_01927 PF00563 EAL domain J166_01928 PF00990 Diguanylate cyclase, GGDEF domain J166_01928 PF03707 Bacterial signalling protein N terminal repeat J166_01928 PF13188 PAS domain J166_01928 PF00563 EAL domain J166_01929 PF00990 Diguanylate cyclase, GGDEF domain J166_01929 PF03707 Bacterial signalling protein N terminal repeat J166_01929 PF00563 EAL domain J166_01930 PF01312 FlhB HrpN YscU SpaS Family J166_01931 PF00771 FHIPEP family J166_01932 PF00448 SRP54-type protein, GTPase domain J166_01933 PF10609 NUBPL iron-transfer P-loop NTPase J166_01934 PF04545 Sigma-70, region 4 J166_01934 PF04542 Sigma-70 region 2 J166_01934 PF04539 Sigma-70 region 3 J166_01935 PF00072 Response regulator receiver domain J166_01936 PF04344 Chemotaxis phosphatase, CheZ J166_01937 PF01627 Hpt domain J166_01937 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_01937 PF01584 CheW-like domain J166_01937 PF07194 P2 response regulator binding domain J166_01937 PF02895 Signal transducing histidine kinase, homodimeric domain J166_01939 PF04055 Radical SAM superfamily J166_01939 PF13186 Iron-sulfur cluster-binding domain J166_01944 PF01527 Transposase J166_01945 PF13276 HTH-like domain J166_01945 PF00665 Integrase core domain J166_01945 PF13333 Integrase core domain J166_01947 PF00665 Integrase core domain J166_01947 PF02796 Helix-turn-helix domain of resolvase J166_01948 PF01695 IstB-like ATP binding protein J166_01953 PF13361 UvrD-like helicase C-terminal domain J166_01953 PF12462 DNA helicase IV / RNA helicase N terminal J166_01953 PF00580 UvrD/REP helicase N-terminal domain J166_01968 PF03466 LysR substrate binding domain J166_01968 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_01969 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J166_01969 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J166_01970 PF03401 Tripartite tricarboxylate transporter family receptor J166_01974 PF04002 RadC-like JAB domain J166_01981 PF13356 Arm DNA-binding domain J166_01981 PF00589 Phage integrase family J166_01982 PF00117 Glutamine amidotransferase class-I J166_01982 PF00958 GMP synthase C terminal domain J166_01982 PF02540 NAD synthase J166_01983 PF00571 CBS domain J166_01983 PF00478 IMP dehydrogenase / GMP reductase domain J166_01984 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J166_01984 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J166_01986 PF02254 TrkA-N domain J166_01986 PF00999 Sodium/hydrogen exchanger family J166_01987 PF00483 Nucleotidyl transferase J166_01988 PF02719 Polysaccharide biosynthesis protein J166_01989 PF00953 Glycosyl transferase family 4 J166_01990 PF18073 Rubredoxin metal binding domain J166_01992 PF00216 Bacterial DNA-binding protein J166_01993 PF00575 S1 RNA binding domain J166_01994 PF02224 Cytidylate kinase J166_01995 PF00444 Ribosomal protein L36 J166_01998 PF04371 Porphyromonas-type peptidyl-arginine deiminase J166_01999 PF00795 Carbon-nitrogen hydrolase J166_02004 PF00528 Binding-protein-dependent transport system inner membrane component J166_02005 PF00528 Binding-protein-dependent transport system inner membrane component J166_02009 PF00356 Bacterial regulatory proteins, lacI family J166_02011 PF03795 YCII-related domain J166_02012 PF02616 Segregation and condensation protein ScpA J166_02013 PF04079 Segregation and condensation complex subunit ScpB J166_02014 PF00849 RNA pseudouridylate synthase J166_02014 PF01479 S4 domain J166_02017 PF00795 Carbon-nitrogen hydrolase J166_02018 PF00155 Aminotransferase class I and II J166_02019 PF00005 ABC transporter J166_02020 PF03379 CcmB protein J166_02021 PF01578 Cytochrome C assembly protein J166_02023 PF03100 CcmE J166_02024 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J166_02024 PF01578 Cytochrome C assembly protein J166_02025 PF08534 Redoxin J166_02026 PF03918 Cytochrome C biogenesis protein J166_02028 PF00561 alpha/beta hydrolase fold J166_02029 PF00313 'Cold-shock' DNA-binding domain J166_02030 PF00664 ABC transporter transmembrane region J166_02030 PF00005 ABC transporter J166_02031 PF00005 ABC transporter J166_02031 PF00664 ABC transporter transmembrane region J166_02032 PF01654 Cytochrome bd terminal oxidase subunit I J166_02033 PF02322 Cytochrome bd terminal oxidase subunit II J166_02037 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J166_02037 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J166_02038 PF00171 Aldehyde dehydrogenase family J166_02039 PF01472 PUA domain J166_02039 PF00696 Amino acid kinase family J166_02041 PF00206 Lyase J166_02042 PF01118 Semialdehyde dehydrogenase, NAD binding domain J166_02044 PF00696 Amino acid kinase family J166_02044 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J166_02047 PF00764 Arginosuccinate synthase J166_02048 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J166_02048 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J166_02050 PF01406 tRNA synthetases class I (C) catalytic domain J166_02050 PF09190 DALR domain J166_02051 PF02657 Fe-S metabolism associated domain J166_02053 PF01258 Prokaryotic dksA/traR C4-type zinc finger J166_02054 PF01809 Putative membrane protein insertion efficiency factor J166_02055 PF01979 Amidohydrolase family J166_02056 PF01551 Peptidase family M23 J166_02056 PF08460 Bacterial SH3 domain J166_02059 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J166_02060 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J166_02062 PF00753 Metallo-beta-lactamase superfamily J166_02066 PF01527 Transposase J166_02069 PF00295 Glycosyl hydrolases family 28 J166_02071 PF13419 Haloacid dehalogenase-like hydrolase J166_02073 PF01979 Amidohydrolase family J166_02075 PF08207 Elongation factor P (EF-P) KOW-like domain J166_02075 PF01132 Elongation factor P (EF-P) OB domain J166_02075 PF09285 Elongation factor P, C-terminal J166_02076 PF04055 Radical SAM superfamily J166_02077 PF13188 PAS domain J166_02077 PF03707 Bacterial signalling protein N terminal repeat J166_02077 PF00563 EAL domain J166_02077 PF00990 Diguanylate cyclase, GGDEF domain J166_02079 PF00588 SpoU rRNA Methylase family J166_02080 PF00459 Inositol monophosphatase family J166_02081 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J166_02081 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J166_02082 PF00545 ribonuclease J166_02085 PF03880 DbpA RNA binding domain J166_02085 PF00270 DEAD/DEAH box helicase J166_02085 PF00271 Helicase conserved C-terminal domain J166_02086 PF00156 Phosphoribosyl transferase domain J166_02087 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J166_02088 PF00135 Carboxylesterase family J166_02089 PF14497 Glutathione S-transferase, C-terminal domain J166_02089 PF02798 Glutathione S-transferase, N-terminal domain J166_02090 PF00313 'Cold-shock' DNA-binding domain J166_02091 PF07152 YaeQ protein J166_02093 PF00990 Diguanylate cyclase, GGDEF domain J166_02093 PF00563 EAL domain J166_02093 PF00072 Response regulator receiver domain J166_02094 PF01435 Peptidase family M48 J166_02095 PF00749 tRNA synthetases class I (E and Q), catalytic domain J166_02096 PF00106 short chain dehydrogenase J166_02097 PF07879 PHB/PHA accumulation regulator DNA-binding domain J166_02097 PF05233 PHB accumulation regulatory domain J166_02100 PF08676 MutL C terminal dimerisation domain J166_02100 PF01119 DNA mismatch repair protein, C-terminal domain J166_02101 PF01520 N-acetylmuramoyl-L-alanine amidase J166_02101 PF11741 AMIN domain J166_02102 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J166_02103 PF01256 Carbohydrate kinase J166_02103 PF03853 YjeF-related protein N-terminus J166_02104 PF08331 Domain of unknown function (DUF1730) J166_02105 PF02601 Exonuclease VII, large subunit J166_02105 PF13742 OB-fold nucleic acid binding domain J166_02107 PF03781 Sulfatase-modifying factor enzyme 1 J166_02108 PF01612 3'-5' exonuclease J166_02108 PF00570 HRDC domain J166_02110 PF04679 ATP dependent DNA ligase C terminal region J166_02110 PF01068 ATP dependent DNA ligase domain J166_02110 PF13298 DNA polymerase Ligase (LigD) J166_02114 PF00589 Phage integrase family J166_02118 PF05598 Transposase domain (DUF772) J166_02120 PF01527 Transposase J166_02124 PF01619 Proline dehydrogenase J166_02124 PF14850 DNA-binding domain of Proline dehydrogenase J166_02124 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J166_02124 PF00171 Aldehyde dehydrogenase family J166_02126 PF01527 Transposase J166_02128 PF13276 HTH-like domain J166_02128 PF00665 Integrase core domain J166_02128 PF13333 Integrase core domain J166_02130 PF02796 Helix-turn-helix domain of resolvase J166_02130 PF00239 Resolvase, N terminal domain J166_02133 PF02384 N-6 DNA Methylase J166_02134 PF09572 XamI restriction endonuclease J166_02146 PF01584 CheW-like domain J166_02147 PF00672 HAMP domain J166_02147 PF12729 Four helix bundle sensory module for signal transduction J166_02147 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02148 PF02245 Methylpurine-DNA glycosylase (MPG) J166_02149 PF08494 DEAD/H associated J166_02149 PF00271 Helicase conserved C-terminal domain J166_02149 PF00270 DEAD/DEAH box helicase J166_02152 PF04386 Stringent starvation protein B J166_02153 PF00043 Glutathione S-transferase, C-terminal domain J166_02153 PF02798 Glutathione S-transferase, N-terminal domain J166_02154 PF02167 Cytochrome C1 family J166_02155 PF00032 Cytochrome b(C-terminal)/b6/petD J166_02155 PF00033 Cytochrome b/b6/petB J166_02156 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J166_02156 PF00355 Rieske [2Fe-2S] domain J166_02157 PF01464 Transglycosylase SLT domain J166_02160 PF01938 TRAM domain J166_02160 PF00919 Uncharacterized protein family UPF0004 J166_02160 PF04055 Radical SAM superfamily J166_02161 PF02562 PhoH-like protein J166_02163 PF02130 Uncharacterized protein family UPF0054 J166_02165 PF00571 CBS domain J166_02165 PF03471 Transporter associated domain J166_02168 PF00171 Aldehyde dehydrogenase family J166_02169 PF00528 Binding-protein-dependent transport system inner membrane component J166_02170 PF00528 Binding-protein-dependent transport system inner membrane component J166_02171 PF00005 ABC transporter J166_02171 PF08402 TOBE domain J166_02172 PF02321 Outer membrane efflux protein J166_02173 PF07690 Major Facilitator Superfamily J166_02174 PF13533 Biotin-lipoyl like J166_02175 PF13416 Bacterial extracellular solute-binding protein J166_02176 PF00202 Aminotransferase class-III J166_02177 PF00120 Glutamine synthetase, catalytic domain J166_02178 PF07722 Peptidase C26 J166_02179 PF00120 Glutamine synthetase, catalytic domain J166_02180 PF01266 FAD dependent oxidoreductase J166_02181 PF00072 Response regulator receiver domain J166_02181 PF00990 Diguanylate cyclase, GGDEF domain J166_02182 PF01814 Hemerythrin HHE cation binding domain J166_02183 PF07690 Major Facilitator Superfamily J166_02183 PF00083 Sugar (and other) transporter J166_02185 PF00384 Molybdopterin oxidoreductase J166_02186 PF02634 FdhD/NarQ family J166_02187 PF07690 Major Facilitator Superfamily J166_02188 PF00202 Aminotransferase class-III J166_02190 PF04286 Protein of unknown function (DUF445) J166_02191 PF00672 HAMP domain J166_02191 PF00512 His Kinase A (phospho-acceptor) domain J166_02191 PF01627 Hpt domain J166_02191 PF00072 Response regulator receiver domain J166_02191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02191 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J166_02192 PF00072 Response regulator receiver domain J166_02193 PF07690 Major Facilitator Superfamily J166_02194 PF05088 Bacterial NAD-glutamate dehydrogenase J166_02196 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_02196 PF00529 HlyD membrane-fusion protein of T1SS J166_02197 PF00873 AcrB/AcrD/AcrF family J166_02198 PF00356 Bacterial regulatory proteins, lacI family J166_02199 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J166_02199 PF00391 PEP-utilising enzyme, mobile domain J166_02199 PF02896 PEP-utilising enzyme, TIM barrel domain J166_02199 PF00381 PTS HPr component phosphorylation site J166_02199 PF05524 PEP-utilising enzyme, N-terminal J166_02200 PF00294 pfkB family carbohydrate kinase J166_02201 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J166_02209 PF02355 Protein export membrane protein J166_02209 PF07549 SecD/SecF GG Motif J166_02210 PF07549 SecD/SecF GG Motif J166_02210 PF13721 SecD export protein N-terminal TM region J166_02210 PF02355 Protein export membrane protein J166_02211 PF02699 Preprotein translocase subunit J166_02212 PF01702 Queuine tRNA-ribosyltransferase J166_02213 PF02547 Queuosine biosynthesis protein J166_02222 PF00759 Glycosyl hydrolase family 9 J166_02222 PF02927 Cellulase N-terminal ig-like domain J166_02224 PF00037 4Fe-4S binding domain J166_02227 PF01467 Cytidylyltransferase-like J166_02229 PF00183 Hsp90 protein J166_02229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02233 PF07715 TonB-dependent Receptor Plug Domain J166_02233 PF00593 TonB dependent receptor J166_02235 PF04616 Glycosyl hydrolases family 43 J166_02236 PF07532 Bacterial Ig-like domain (group 4) J166_02237 PF07715 TonB-dependent Receptor Plug Domain J166_02237 PF00593 TonB dependent receptor J166_02239 PF00082 Subtilase family J166_02239 PF09286 Pro-kumamolisin, activation domain J166_02245 PF13520 Amino acid permease J166_02248 PF00557 Metallopeptidase family M24 J166_02248 PF01321 Creatinase/Prolidase N-terminal domain J166_02249 PF00171 Aldehyde dehydrogenase family J166_02250 PF00701 Dihydrodipicolinate synthetase family J166_02251 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_02251 PF04324 BFD-like [2Fe-2S] binding domain J166_02253 PF01266 FAD dependent oxidoreductase J166_02254 PF05544 Proline racemase J166_02256 PF02881 SRP54-type protein, helical bundle domain J166_02256 PF00448 SRP54-type protein, GTPase domain J166_02257 PF10576 Iron-sulfur binding domain of endonuclease III J166_02257 PF14815 NUDIX domain J166_02257 PF00730 HhH-GPD superfamily base excision DNA repair protein J166_02257 PF00633 Helix-hairpin-helix motif J166_02258 PF04362 Bacterial Fe(2+) trafficking J166_02259 PF00072 Response regulator receiver domain J166_02259 PF13426 PAS domain J166_02259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02265 PF08212 Lipocalin-like domain J166_02267 PF12806 Acetyl-CoA dehydrogenase C-terminal like J166_02267 PF02770 Acyl-CoA dehydrogenase, middle domain J166_02267 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_02267 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_02269 PF02779 Transketolase, pyrimidine binding domain J166_02269 PF02780 Transketolase, C-terminal domain J166_02269 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J166_02273 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J166_02274 PF16123 Hydroxyacylglutathione hydrolase C-terminus J166_02274 PF00753 Metallo-beta-lactamase superfamily J166_02275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J166_02275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J166_02278 PF03808 Glycosyl transferase WecB/TagA/CpsF family J166_02281 PF14667 Polysaccharide biosynthesis C-terminal domain J166_02283 PF13439 Glycosyltransferase Family 4 J166_02283 PF00534 Glycosyl transferases group 1 J166_02287 PF02397 Bacterial sugar transferase J166_02291 PF13411 MerR HTH family regulatory protein J166_02292 PF00216 Bacterial DNA-binding protein J166_02293 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J166_02293 PF01588 Putative tRNA binding domain J166_02293 PF03147 Ferredoxin-fold anticodon binding domain J166_02293 PF03483 B3/4 domain J166_02293 PF03484 tRNA synthetase B5 domain J166_02294 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J166_02294 PF01409 tRNA synthetases class II core domain (F) J166_02295 PF00453 Ribosomal protein L20 J166_02296 PF01632 Ribosomal protein L35 J166_02298 PF05198 Translation initiation factor IF-3, N-terminal domain J166_02298 PF00707 Translation initiation factor IF-3, C-terminal domain J166_02299 PF03129 Anticodon binding domain J166_02299 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J166_02299 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J166_02299 PF02824 TGS domain J166_02300 PF00356 Bacterial regulatory proteins, lacI family J166_02301 PF00128 Alpha amylase, catalytic domain J166_02301 PF00686 Starch binding domain J166_02302 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J166_02304 PF14508 Glycosyl-hydrolase 97 N-terminal J166_02304 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J166_02304 PF10566 Glycoside hydrolase 97 J166_02308 PF00128 Alpha amylase, catalytic domain J166_02309 PF01527 Transposase J166_02313 PF00083 Sugar (and other) transporter J166_02315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J166_02315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J166_02317 PF16338 Domain of unknown function (DUF4968) J166_02317 PF17137 Domain of unknown function (DUF5110) J166_02317 PF01055 Glycosyl hydrolases family 31 J166_02320 PF03442 Carbohydrate binding domain X2 J166_02320 PF00942 Cellulose binding domain J166_02323 PF03466 LysR substrate binding domain J166_02323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_02325 PF01081 KDPG and KHG aldolase J166_02326 PF13378 Enolase C-terminal domain-like J166_02326 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J166_02327 PF08450 SMP-30/Gluconolactonase/LRE-like region J166_02328 PF05035 2-keto-3-deoxy-galactonokinase J166_02329 PF00037 4Fe-4S binding domain J166_02329 PF11953 Domain of unknown function (DUF3470) J166_02331 PF00701 Dihydrodipicolinate synthetase family J166_02334 PF00578 AhpC/TSA family J166_02335 PF13638 PIN domain J166_02335 PF02562 PhoH-like protein J166_02338 PF08543 Phosphomethylpyrimidine kinase J166_02338 PF02581 Thiamine monophosphate synthase J166_02343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_02343 PF03466 LysR substrate binding domain J166_02344 PF02678 Pirin J166_02344 PF17954 Quercetinase C-terminal cupin domain J166_02345 PF08447 PAS fold J166_02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02345 PF13426 PAS domain J166_02347 PF02599 Global regulator protein family J166_02348 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J166_02348 PF02272 DHHA1 domain J166_02348 PF01411 tRNA synthetases class II (A) J166_02349 PF02631 RecX family J166_02350 PF00154 recA bacterial DNA recombination protein J166_02351 PF00717 Peptidase S24-like J166_02351 PF01726 LexA DNA binding domain J166_02352 PF03109 ABC1 family J166_02353 PF02464 Competence-damaged protein J166_02354 PF13167 GTP-binding GTPase N-terminal J166_02354 PF16360 GTP-binding GTPase Middle Region J166_02354 PF01926 50S ribosome-binding GTPase J166_02355 PF17209 Hfq protein J166_02357 PF00809 Pterin binding enzyme J166_02358 PF00004 ATPase family associated with various cellular activities (AAA) J166_02358 PF17862 AAA+ lid domain J166_02358 PF06480 FtsH Extracellular J166_02358 PF01434 Peptidase family M41 J166_02359 PF01728 FtsJ-like methyltransferase J166_02360 PF01985 CRS1 / YhbY (CRM) domain J166_02361 PF04430 Protein of unknown function (DUF498/DUF598) J166_02363 PF01551 Peptidase family M23 J166_02363 PF01476 LysM domain J166_02364 PF09335 SNARE associated Golgi protein J166_02366 PF01975 Survival protein SurE J166_02367 PF01713 Smr domain J166_02368 PF01142 tRNA pseudouridine synthase D (TruD) J166_02369 PF02542 YgbB family J166_02370 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J166_02371 PF04977 Septum formation initiator J166_02372 PF03952 Enolase, N-terminal domain J166_02372 PF00113 Enolase, C-terminal TIM barrel domain J166_02374 PF00793 DAHP synthetase I family J166_02375 PF06418 CTP synthase N-terminus J166_02375 PF00117 Glutamine amidotransferase class-I J166_02377 PF01751 Toprim domain J166_02377 PF00204 DNA gyrase B J166_02377 PF00986 DNA gyrase B subunit, carboxyl terminus J166_02377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02380 PF01384 Phosphate transporter family J166_02382 PF00571 CBS domain J166_02382 PF03471 Transporter associated domain J166_02382 PF01595 Cyclin M transmembrane N-terminal domain J166_02385 PF00296 Luciferase-like monooxygenase J166_02386 PF07690 Major Facilitator Superfamily J166_02387 PF00664 ABC transporter transmembrane region J166_02387 PF00005 ABC transporter J166_02388 PF00005 ABC transporter J166_02391 PF00534 Glycosyl transferases group 1 J166_02391 PF13579 Glycosyl transferase 4-like domain J166_02395 PF08241 Methyltransferase domain J166_02398 PF00535 Glycosyl transferase family 2 J166_02399 PF01943 Polysaccharide biosynthesis protein J166_02400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J166_02404 PF05523 WxcM-like, C-terminal J166_02407 PF00034 Cytochrome c J166_02410 PF08281 Sigma-70, region 4 J166_02410 PF04542 Sigma-70 region 2 J166_02412 PF00082 Subtilase family J166_02413 PF01578 Cytochrome C assembly protein J166_02415 PF03100 CcmE J166_02416 PF01578 Cytochrome C assembly protein J166_02416 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J166_02417 PF08534 Redoxin J166_02418 PF03918 Cytochrome C biogenesis protein J166_02420 PF00072 Response regulator receiver domain J166_02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02420 PF13426 PAS domain J166_02421 PF06745 KaiC J166_02422 PF00072 Response regulator receiver domain J166_02422 PF00486 Transcriptional regulatory protein, C terminal J166_02423 PF08448 PAS fold J166_02423 PF00512 His Kinase A (phospho-acceptor) domain J166_02423 PF13188 PAS domain J166_02423 PF00072 Response regulator receiver domain J166_02423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02426 PF02203 Tar ligand binding domain homologue J166_02426 PF00672 HAMP domain J166_02431 PF00665 Integrase core domain J166_02431 PF13276 HTH-like domain J166_02431 PF13333 Integrase core domain J166_02432 PF01527 Transposase J166_02433 PF01381 Helix-turn-helix J166_02434 PF05284 Protein of unknown function (DUF736) J166_02435 PF04002 RadC-like JAB domain J166_02440 PF13356 Arm DNA-binding domain J166_02440 PF00589 Phage integrase family J166_02443 PF07715 TonB-dependent Receptor Plug Domain J166_02443 PF00593 TonB dependent receptor J166_02447 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J166_02452 PF07715 TonB-dependent Receptor Plug Domain J166_02452 PF00593 TonB dependent receptor J166_02454 PF10947 Protein of unknown function (DUF2628) J166_02456 PF00722 Glycosyl hydrolases family 16 J166_02456 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J166_02460 PF03412 Peptidase C39 family J166_02460 PF00005 ABC transporter J166_02460 PF00664 ABC transporter transmembrane region J166_02462 PF13614 AAA domain J166_02471 PF01751 Toprim domain J166_02471 PF01131 DNA topoisomerase J166_02472 PF01131 DNA topoisomerase J166_02472 PF01751 Toprim domain J166_02473 PF00145 C-5 cytosine-specific DNA methylase J166_02485 PF17761 DUF1016 N-terminal domain J166_02485 PF06250 YhcG PDDEXK nuclease domain J166_02486 PF01527 Transposase J166_02487 PF00665 Integrase core domain J166_02487 PF13276 HTH-like domain J166_02487 PF13333 Integrase core domain J166_02497 PF00069 Protein kinase domain J166_02497 PF03793 PASTA domain J166_02500 PF01618 MotA/TolQ/ExbB proton channel family J166_02501 PF00691 OmpA family J166_02501 PF13677 Membrane MotB of proton-channel complex MotA/MotB J166_02502 PF13614 AAA domain J166_02503 PF01584 CheW-like domain J166_02505 PF00072 Response regulator receiver domain J166_02506 PF01627 Hpt domain J166_02506 PF01584 CheW-like domain J166_02506 PF09078 CheY binding J166_02506 PF02895 Signal transducing histidine kinase, homodimeric domain J166_02506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02507 PF00672 HAMP domain J166_02507 PF02203 Tar ligand binding domain homologue J166_02507 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02509 PF17200 Single Cache domain 2 J166_02509 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02509 PF00672 HAMP domain J166_02509 PF17200 Single Cache domain 2 J166_02509 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02509 PF00672 HAMP domain J166_02510 PF00672 HAMP domain J166_02510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02510 PF02203 Tar ligand binding domain homologue J166_02512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02512 PF00672 HAMP domain J166_02512 PF02203 Tar ligand binding domain homologue J166_02513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02513 PF00672 HAMP domain J166_02514 PF00672 HAMP domain J166_02514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02514 PF02203 Tar ligand binding domain homologue J166_02515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02515 PF02203 Tar ligand binding domain homologue J166_02515 PF00672 HAMP domain J166_02516 PF00672 HAMP domain J166_02516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02516 PF02203 Tar ligand binding domain homologue J166_02517 PF02203 Tar ligand binding domain homologue J166_02517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02517 PF00672 HAMP domain J166_02518 PF00672 HAMP domain J166_02518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02518 PF02203 Tar ligand binding domain homologue J166_02519 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02519 PF02203 Tar ligand binding domain homologue J166_02519 PF00672 HAMP domain J166_02520 PF00672 HAMP domain J166_02520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02520 PF02203 Tar ligand binding domain homologue J166_02521 PF07317 Flagellar regulator YcgR J166_02521 PF07238 PilZ domain J166_02522 PF01584 CheW-like domain J166_02524 PF02203 Tar ligand binding domain homologue J166_02524 PF00672 HAMP domain J166_02524 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_02525 PF03705 CheR methyltransferase, all-alpha domain J166_02525 PF01739 CheR methyltransferase, SAM binding domain J166_02526 PF03975 CheD chemotactic sensory transduction J166_02527 PF00072 Response regulator receiver domain J166_02527 PF01339 CheB methylesterase J166_02528 PF00990 Diguanylate cyclase, GGDEF domain J166_02528 PF03707 Bacterial signalling protein N terminal repeat J166_02528 PF00563 EAL domain J166_02529 PF00561 alpha/beta hydrolase fold J166_02530 PF06434 Aconitate hydratase 2 N-terminus J166_02530 PF00330 Aconitase family (aconitate hydratase) J166_02530 PF11791 Aconitate B N-terminal domain J166_02533 PF00330 Aconitase family (aconitate hydratase) J166_02533 PF00694 Aconitase C-terminal domain J166_02535 PF13193 AMP-binding enzyme C-terminal domain J166_02535 PF00501 AMP-binding enzyme J166_02536 PF00378 Enoyl-CoA hydratase/isomerase J166_02537 PF00512 His Kinase A (phospho-acceptor) domain J166_02537 PF01627 Hpt domain J166_02537 PF00072 Response regulator receiver domain J166_02537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_02538 PF00072 Response regulator receiver domain J166_02539 PF00152 tRNA synthetases class II (D, K and N) J166_02539 PF01336 OB-fold nucleic acid binding domain J166_02540 PF00472 RF-1 domain J166_02540 PF03462 PCRF domain J166_02541 PF00072 Response regulator receiver domain J166_02541 PF04397 LytTr DNA-binding domain J166_02549 PF17768 RecJ OB domain J166_02549 PF02272 DHHA1 domain J166_02549 PF01368 DHH family J166_02551 PF01272 Transcription elongation factor, GreA/GreB, C-term J166_02551 PF03449 Transcription elongation factor, N-terminal J166_02552 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J166_02552 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J166_02552 PF02142 MGS-like domain J166_02554 PF00117 Glutamine amidotransferase class-I J166_02554 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J166_02555 PF05173 Dihydrodipicolinate reductase, C-terminus J166_02555 PF01113 Dihydrodipicolinate reductase, N-terminus J166_02556 PF03475 3-alpha domain J166_02556 PF03473 MOSC domain J166_02557 PF00155 Aminotransferase class I and II J166_02560 PF07670 Nucleoside recognition J166_02560 PF02421 Ferrous iron transport protein B J166_02560 PF07664 Ferrous iron transport protein B C terminus J166_02562 PF00378 Enoyl-CoA hydratase/isomerase J166_02564 PF00682 HMGL-like J166_02565 PF00106 short chain dehydrogenase J166_02566 PF09285 Elongation factor P, C-terminal J166_02566 PF08207 Elongation factor P (EF-P) KOW-like domain J166_02566 PF01132 Elongation factor P (EF-P) OB domain J166_02570 PF01565 FAD binding domain J166_02570 PF02913 FAD linked oxidases, C-terminal domain J166_02571 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J166_02571 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J166_02571 PF01842 ACT domain J166_02573 PF13520 Amino acid permease J166_02574 PF13520 Amino acid permease J166_02575 PF00596 Class II Aldolase and Adducin N-terminal domain J166_02576 PF03079 ARD/ARD' family J166_02580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J166_02580 PF01502 Phosphoribosyl-AMP cyclohydrolase J166_02581 PF00977 Histidine biosynthesis protein J166_02582 PF00977 Histidine biosynthesis protein J166_02583 PF00117 Glutamine amidotransferase class-I J166_02584 PF00475 Imidazoleglycerol-phosphate dehydratase J166_02585 PF00155 Aminotransferase class I and II J166_02586 PF00815 Histidinol dehydrogenase J166_02587 PF01634 ATP phosphoribosyltransferase J166_02587 PF08029 HisG, C-terminal domain J166_02589 PF13393 Histidyl-tRNA synthetase J166_02589 PF03129 Anticodon binding domain J166_02590 PF00027 Cyclic nucleotide-binding domain J166_02590 PF13545 Crp-like helix-turn-helix domain J166_02592 PF00291 Pyridoxal-phosphate dependent enzyme J166_02592 PF14821 Threonine synthase N terminus J166_02594 PF08544 GHMP kinases C terminal J166_02594 PF00288 GHMP kinases N terminal domain J166_02595 PF00742 Homoserine dehydrogenase J166_02595 PF03447 Homoserine dehydrogenase, NAD binding domain J166_02595 PF01842 ACT domain J166_02595 PF00696 Amino acid kinase family J166_02595 PF13840 ACT domain J166_02597 PF13018 Extended Signal Peptide of Type V secretion system J166_02597 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J166_02597 PF05594 Haemagluttinin repeat J166_02597 PF13332 Hemagglutinin repeat J166_02597 PF05860 haemagglutination activity domain J166_02599 PF13332 Hemagglutinin repeat J166_02599 PF05594 Haemagluttinin repeat J166_02599 PF04829 Pre-toxin domain with VENN motif J166_02600 PF05594 Haemagluttinin repeat J166_02600 PF13332 Hemagglutinin repeat J166_02600 PF04829 Pre-toxin domain with VENN motif J166_02601 PF17287 POTRA domain J166_02601 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J166_02601 PF08479 POTRA domain, ShlB-type J166_02603 PF14883 Hypothetical glycosyl hydrolase family 13 J166_02603 PF01522 Polysaccharide deacetylase J166_02604 PF00535 Glycosyl transferase family 2 J166_02607 PF00171 Aldehyde dehydrogenase family J166_02610 PF01180 Dihydroorotate dehydrogenase J166_02611 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J166_02611 PF01565 FAD binding domain J166_02612 PF00892 EamA-like transporter family J166_02613 PF01177 Asp/Glu/Hydantoin racemase J166_02614 PF07690 Major Facilitator Superfamily J166_02615 PF01569 PAP2 superfamily J166_02616 PF04551 GcpE protein J166_02618 PF00072 Response regulator receiver domain J166_02619 PF00150 Cellulase (glycosyl hydrolase family 5) J166_02619 PF02013 Cellulose or protein binding domain J166_02620 PF01590 GAF domain J166_02620 PF00990 Diguanylate cyclase, GGDEF domain J166_02620 PF00563 EAL domain J166_02620 PF00360 Phytochrome region J166_02621 PF00474 Sodium:solute symporter family J166_02622 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_02622 PF14310 Fibronectin type III-like domain J166_02622 PF01915 Glycosyl hydrolase family 3 C-terminal domain J166_02626 PF00342 Phosphoglucose isomerase J166_02627 PF02261 Aspartate decarboxylase J166_02628 PF02569 Pantoate-beta-alanine ligase J166_02629 PF02548 Ketopantoate hydroxymethyltransferase J166_02630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J166_02631 PF12626 Polymerase A arginine-rich C-terminus J166_02631 PF12627 Probable RNA and SrmB- binding site of polymerase A J166_02631 PF01743 Poly A polymerase head domain J166_02635 PF02649 Type I GTP cyclohydrolase folE2 J166_02636 PF01520 N-acetylmuramoyl-L-alanine amidase J166_02638 PF00128 Alpha amylase, catalytic domain J166_02640 PF01527 Transposase J166_02649 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J166_02652 PF01464 Transglycosylase SLT domain J166_02653 PF00437 Type II/IV secretion system protein J166_02654 PF03743 Bacterial conjugation TrbI-like protein J166_02658 PF02534 Type IV secretory system Conjugative DNA transfer J166_02661 PF17757 UvrB interaction domain J166_02661 PF04851 Type III restriction enzyme, res subunit J166_02661 PF02151 UvrB/uvrC motif J166_02661 PF00271 Helicase conserved C-terminal domain J166_02661 PF12344 Ultra-violet resistance protein B J166_02670 PF01527 Transposase J166_02671 PF13333 Integrase core domain J166_02671 PF00665 Integrase core domain J166_02671 PF13276 HTH-like domain J166_02677 PF03466 LysR substrate binding domain J166_02677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_02678 PF02525 Flavodoxin-like fold J166_02679 PF02403 Seryl-tRNA synthetase N-terminal domain J166_02679 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J166_02680 PF03544 Gram-negative bacterial TonB protein C-terminal J166_02682 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J166_02683 PF01817 Chorismate mutase type II J166_02683 PF00800 Prephenate dehydratase J166_02683 PF01842 ACT domain J166_02684 PF00266 Aminotransferase class-V J166_02685 PF00174 Oxidoreductase molybdopterin binding domain J166_02686 PF01794 Ferric reductase like transmembrane component J166_02692 PF07702 UTRA domain J166_02692 PF00392 Bacterial regulatory proteins, gntR family J166_02694 PF07969 Amidohydrolase family J166_02695 PF00221 Aromatic amino acid lyase J166_02697 PF17391 Urocanase N-terminal domain J166_02697 PF17392 Urocanase C-terminal domain J166_02697 PF01175 Urocanase Rossmann-like domain J166_02698 PF01011 PQQ enzyme repeat J166_02699 PF00521 DNA gyrase/topoisomerase IV, subunit A J166_02699 PF03989 DNA gyrase C-terminal domain, beta-propeller J166_02700 PF01008 Initiation factor 2 subunit family J166_02702 PF00152 tRNA synthetases class II (D, K and N) J166_02703 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J166_02703 PF00533 BRCA1 C Terminus (BRCT) domain J166_02703 PF12826 Helix-hairpin-helix motif J166_02703 PF03120 NAD-dependent DNA ligase OB-fold domain J166_02703 PF01653 NAD-dependent DNA ligase adenylation domain J166_02704 PF00155 Aminotransferase class I and II J166_02706 PF04354 ZipA, C-terminal FtsZ-binding domain J166_02707 PF02463 RecF/RecN/SMC N terminal domain J166_02708 PF03948 Ribosomal protein L9, C-terminal domain J166_02708 PF01281 Ribosomal protein L9, N-terminal domain J166_02709 PF01084 Ribosomal protein S18 J166_02710 PF01250 Ribosomal protein S6 J166_02711 PF01521 Iron-sulphur cluster biosynthesis J166_02712 PF00152 tRNA synthetases class II (D, K and N) J166_02712 PF01336 OB-fold nucleic acid binding domain J166_02716 PF04299 Putative FMN-binding domain J166_02719 PF00196 Bacterial regulatory proteins, luxR family J166_02719 PF00072 Response regulator receiver domain J166_02728 PF00484 Carbonic anhydrase J166_02729 PF06052 3-hydroxyanthranilic acid dioxygenase J166_02731 PF00266 Aminotransferase class-V J166_02732 PF01494 FAD binding domain J166_02733 PF08411 Exonuclease C-terminal J166_02733 PF00929 Exonuclease J166_02737 PF01513 ATP-NAD kinase J166_02738 PF02926 THUMP domain J166_02738 PF01170 Putative RNA methylase family UPF0020 J166_02738 PF10672 S-adenosylmethionine-dependent methyltransferase J166_02745 PF00581 Rhodanese-like domain J166_02746 PF00293 NUDIX domain J166_02747 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J166_02747 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J166_02748 PF00378 Enoyl-CoA hydratase/isomerase J166_02750 PF10576 Iron-sulfur binding domain of endonuclease III J166_02750 PF00633 Helix-hairpin-helix motif J166_02750 PF00730 HhH-GPD superfamily base excision DNA repair protein J166_02751 PF01740 STAS domain J166_02751 PF00916 Sulfate permease family J166_02752 PF00484 Carbonic anhydrase J166_02755 PF12849 PBP superfamily domain J166_02756 PF12849 PBP superfamily domain J166_02757 PF00528 Binding-protein-dependent transport system inner membrane component J166_02758 PF00528 Binding-protein-dependent transport system inner membrane component J166_02759 PF00005 ABC transporter J166_02760 PF01895 PhoU domain J166_02762 PF00929 Exonuclease J166_02763 PF07694 5TMR of 5TMR-LYT J166_02763 PF00990 Diguanylate cyclase, GGDEF domain J166_02764 PF08032 RNA 2'-O ribose methyltransferase substrate binding J166_02764 PF00588 SpoU rRNA Methylase family J166_02766 PF17876 Cold shock domain J166_02766 PF00575 S1 RNA binding domain J166_02766 PF00773 RNB domain J166_02766 PF08206 Ribonuclease B OB domain J166_02766 PF08461 Ribonuclease R winged-helix domain J166_02769 PF02770 Acyl-CoA dehydrogenase, middle domain J166_02769 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_02769 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_02770 PF01209 ubiE/COQ5 methyltransferase family J166_02771 PF00809 Pterin binding enzyme J166_02771 PF02574 Homocysteine S-methyltransferase J166_02772 PF02310 B12 binding domain J166_02772 PF00809 Pterin binding enzyme J166_02772 PF02574 Homocysteine S-methyltransferase J166_02772 PF02965 Vitamin B12 dependent methionine synthase, activation domain J166_02772 PF02607 B12 binding domain J166_02774 PF00294 pfkB family carbohydrate kinase J166_02775 PF07690 Major Facilitator Superfamily J166_02776 PF00356 Bacterial regulatory proteins, lacI family J166_02779 PF04102 SlyX J166_02780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J166_02780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J166_02780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J166_02781 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J166_02781 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J166_02782 PF00255 Glutathione peroxidase J166_02784 PF00392 Bacterial regulatory proteins, gntR family J166_02785 PF00005 ABC transporter J166_02790 PF10415 Fumarase C C-terminus J166_02790 PF00206 Lyase J166_02791 PF01595 Cyclin M transmembrane N-terminal domain J166_02791 PF03471 Transporter associated domain J166_02791 PF00571 CBS domain J166_02793 PF00206 Lyase J166_02793 PF08328 Adenylosuccinate lyase C-terminal J166_02795 PF08007 Cupin superfamily protein J166_02797 PF02779 Transketolase, pyrimidine binding domain J166_02797 PF16870 2-oxoglutarate dehydrogenase C-terminal J166_02797 PF16078 2-oxoglutarate dehydrogenase N-terminus J166_02797 PF00676 Dehydrogenase E1 component J166_02798 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J166_02798 PF02817 e3 binding domain J166_02798 PF00364 Biotin-requiring enzyme J166_02799 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_02799 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J166_02800 PF03641 Possible lysine decarboxylase J166_02801 PF01205 Uncharacterized protein family UPF0029 J166_02802 PF00005 ABC transporter J166_02802 PF00664 ABC transporter transmembrane region J166_02803 PF03466 LysR substrate binding domain J166_02803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_02804 PF00664 ABC transporter transmembrane region J166_02804 PF03412 Peptidase C39 family J166_02804 PF00005 ABC transporter J166_02809 PF08543 Phosphomethylpyrimidine kinase J166_02811 PF00684 DnaJ central domain J166_02811 PF01556 DnaJ C terminal domain J166_02811 PF00226 DnaJ domain J166_02812 PF00012 Hsp70 protein J166_02813 PF01025 GrpE J166_02814 PF01628 HrcA protein C terminal domain J166_02814 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J166_02815 PF02463 RecF/RecN/SMC N terminal domain J166_02816 PF01475 Ferric uptake regulator family J166_02817 PF04355 SmpA / OmlA family J166_02818 PF03658 RnfH family Ubiquitin J166_02819 PF03364 Polyketide cyclase / dehydrase and lipid transport J166_02820 PF01668 SmpB protein J166_02821 PF00082 Subtilase family J166_02830 PF01527 Transposase J166_02838 PF05598 Transposase domain (DUF772) J166_02849 PF00990 Diguanylate cyclase, GGDEF domain J166_02851 PF00990 Diguanylate cyclase, GGDEF domain J166_02851 PF08448 PAS fold J166_02852 PF02321 Outer membrane efflux protein J166_02853 PF00106 short chain dehydrogenase J166_02854 PF00873 AcrB/AcrD/AcrF family J166_02855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_02855 PF00529 HlyD membrane-fusion protein of T1SS J166_02858 PF03466 LysR substrate binding domain J166_02858 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_02860 PF05736 OprF membrane domain J166_02860 PF00691 OmpA family J166_02861 PF00875 DNA photolyase J166_02861 PF03441 FAD binding domain of DNA photolyase J166_02862 PF03796 DnaB-like helicase C terminal domain J166_02862 PF00772 DnaB-like helicase N terminal domain J166_02863 PF03358 NADPH-dependent FMN reductase J166_02864 PF13537 Glutamine amidotransferase domain J166_02864 PF00733 Asparagine synthase J166_02865 PF00043 Glutathione S-transferase, C-terminal domain J166_02865 PF02798 Glutathione S-transferase, N-terminal domain J166_02867 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_02867 PF02770 Acyl-CoA dehydrogenase, middle domain J166_02867 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_02870 PF01026 TatD related DNase J166_02871 PF00899 ThiF family J166_02874 PF00313 'Cold-shock' DNA-binding domain J166_02876 PF02253 Phospholipase A1 J166_02877 PF00484 Carbonic anhydrase J166_02879 PF05681 Fumarate hydratase (Fumerase) J166_02879 PF05683 Fumarase C-terminus J166_02880 PF00005 ABC transporter J166_02881 PF00175 Oxidoreductase NAD-binding domain J166_02881 PF00970 Oxidoreductase FAD-binding domain J166_02882 PF00255 Glutathione peroxidase J166_02883 PF01432 Peptidase family M3 J166_02884 PF12802 MarR family J166_02889 PF00854 POT family J166_02891 PF14310 Fibronectin type III-like domain J166_02891 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_02891 PF01915 Glycosyl hydrolase family 3 C-terminal domain J166_02893 PF07690 Major Facilitator Superfamily J166_02894 PF00529 HlyD membrane-fusion protein of T1SS J166_02894 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_02895 PF02321 Outer membrane efflux protein J166_02898 PF00521 DNA gyrase/topoisomerase IV, subunit A J166_02898 PF03989 DNA gyrase C-terminal domain, beta-propeller J166_02900 PF05724 Thiopurine S-methyltransferase (TPMT) J166_02901 PF00210 Ferritin-like domain J166_02902 PF01804 Penicillin amidase J166_02903 PF00593 TonB dependent receptor J166_02903 PF07715 TonB-dependent Receptor Plug Domain J166_02905 PF00733 Asparagine synthase J166_02905 PF13537 Glutamine amidotransferase domain J166_02906 PF01546 Peptidase family M20/M25/M40 J166_02906 PF07687 Peptidase dimerisation domain J166_02907 PF03960 ArsC family J166_02908 PF14602 Hexapeptide repeat of succinyl-transferase J166_02908 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J166_02908 PF00132 Bacterial transferase hexapeptide (six repeats) J166_02909 PF08335 GlnD PII-uridylyltransferase J166_02909 PF01966 HD domain J166_02909 PF01909 Nucleotidyltransferase domain J166_02910 PF00557 Metallopeptidase family M24 J166_02917 PF00318 Ribosomal protein S2 J166_02918 PF00889 Elongation factor TS J166_02919 PF00072 Response regulator receiver domain J166_02919 PF00990 Diguanylate cyclase, GGDEF domain J166_02920 PF00696 Amino acid kinase family J166_02921 PF01765 Ribosome recycling factor J166_02922 PF01255 Putative undecaprenyl diphosphate synthase J166_02924 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J166_02924 PF13288 DXP reductoisomerase C-terminal domain J166_02924 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J166_02925 PF02163 Peptidase family M50 J166_02925 PF17820 PDZ domain J166_02926 PF07244 Surface antigen variable number repeat J166_02926 PF01103 Surface antigen J166_02928 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J166_02928 PF00132 Bacterial transferase hexapeptide (six repeats) J166_02929 PF07977 FabA-like domain J166_02930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J166_02930 PF00132 Bacterial transferase hexapeptide (six repeats) J166_02931 PF02684 Lipid-A-disaccharide synthetase J166_02932 PF01351 Ribonuclease HII J166_02933 PF07733 Bacterial DNA polymerase III alpha NTPase domain J166_02933 PF14579 Helix-hairpin-helix motif J166_02933 PF02811 PHP domain J166_02933 PF01336 OB-fold nucleic acid binding domain J166_02933 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J166_02934 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J166_02941 PF03551 Transcriptional regulator PadR-like family J166_02945 PF02592 Putative vitamin uptake transporter J166_02947 PF02574 Homocysteine S-methyltransferase J166_02948 PF00324 Amino acid permease J166_02949 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J166_02950 PF00005 ABC transporter J166_02950 PF13732 Domain of unknown function (DUF4162) J166_02953 PF01588 Putative tRNA binding domain J166_02953 PF09334 tRNA synthetases class I (M) J166_02955 PF04060 Putative Fe-S cluster J166_02958 PF04545 Sigma-70, region 4 J166_02958 PF04542 Sigma-70 region 2 J166_02967 PF01042 Endoribonuclease L-PSP J166_02970 PF03706 Lysylphosphatidylglycerol synthase TM region J166_02970 PF09924 Uncharacterised conserved protein (DUF2156) J166_02977 PF07690 Major Facilitator Superfamily J166_02978 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J166_02979 PF03831 PhnA domain J166_02979 PF08274 PhnA Zinc-Ribbon J166_02981 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J166_02985 PF01258 Prokaryotic dksA/traR C4-type zinc finger J166_02987 PF07043 Protein of unknown function (DUF1328) J166_02988 PF01863 Protein of unknown function DUF45 J166_02990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J166_02990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J166_02991 PF03797 Autotransporter beta-domain J166_02991 PF12951 Passenger-associated-transport-repeat J166_02991 PF00082 Subtilase family J166_02992 PF00108 Thiolase, N-terminal domain J166_02992 PF02803 Thiolase, C-terminal domain J166_02995 PF00072 Response regulator receiver domain J166_02995 PF00990 Diguanylate cyclase, GGDEF domain J166_02998 PF04675 DNA ligase N terminus J166_02998 PF01068 ATP dependent DNA ligase domain J166_02998 PF04679 ATP dependent DNA ligase C terminal region J166_03000 PF04679 ATP dependent DNA ligase C terminal region J166_03000 PF01068 ATP dependent DNA ligase domain J166_03000 PF04675 DNA ligase N terminus J166_03001 PF00270 DEAD/DEAH box helicase J166_03001 PF08494 DEAD/H associated J166_03001 PF00271 Helicase conserved C-terminal domain J166_03003 PF01494 FAD binding domain J166_03004 PF00313 'Cold-shock' DNA-binding domain J166_03005 PF01048 Phosphorylase superfamily J166_03007 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_03008 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J166_03009 PF01593 Flavin containing amine oxidoreductase J166_03010 PF01323 DSBA-like thioredoxin domain J166_03012 PF05958 tRNA (Uracil-5-)-methyltransferase J166_03014 PF11967 Recombination protein O N terminal J166_03014 PF02565 Recombination protein O C terminal J166_03015 PF07650 KH domain J166_03015 PF01926 50S ribosome-binding GTPase J166_03016 PF00035 Double-stranded RNA binding motif J166_03016 PF14622 Ribonuclease-III-like J166_03018 PF10502 Signal peptidase, peptidase S26 J166_03019 PF00679 Elongation factor G C-terminus J166_03019 PF06421 GTP-binding protein LepA C-terminus J166_03019 PF03144 Elongation factor Tu domain 2 J166_03019 PF00009 Elongation factor Tu GTP binding domain J166_03020 PF13180 PDZ domain J166_03022 PF04542 Sigma-70 region 2 J166_03022 PF08281 Sigma-70, region 4 J166_03023 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J166_03023 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J166_03023 PF00378 Enoyl-CoA hydratase/isomerase J166_03024 PF01545 Cation efflux family J166_03025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J166_03025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J166_03026 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J166_03026 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J166_03026 PF00378 Enoyl-CoA hydratase/isomerase J166_03027 PF00378 Enoyl-CoA hydratase/isomerase J166_03028 PF02770 Acyl-CoA dehydrogenase, middle domain J166_03028 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_03028 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_03029 PF00171 Aldehyde dehydrogenase family J166_03030 PF01381 Helix-turn-helix J166_03030 PF06114 IrrE N-terminal-like domain J166_03030 PF09856 Predicted transcriptional regulator (DUF2083) J166_03032 PF07745 Glycosyl hydrolase family 53 J166_03033 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J166_03033 PF16355 Domain of unknown function (DUF4982) J166_03033 PF00703 Glycosyl hydrolases family 2 J166_03033 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J166_03033 PF02837 Glycosyl hydrolases family 2, sugar binding domain J166_03037 PF03527 RHS protein J166_03037 PF05593 RHS Repeat J166_03040 PF01624 MutS domain I J166_03040 PF05190 MutS family domain IV J166_03040 PF05192 MutS domain III J166_03040 PF05188 MutS domain II J166_03040 PF00488 MutS domain V J166_03042 PF00141 Peroxidase J166_03043 PF01479 S4 domain J166_03046 PF01554 MatE J166_03047 PF01245 Ribosomal protein L19 J166_03048 PF01746 tRNA (Guanine-1)-methyltransferase J166_03049 PF05239 PRC-barrel domain J166_03049 PF01782 RimM N-terminal domain J166_03050 PF00886 Ribosomal protein S16 J166_03051 PF01063 Amino-transferase class IV J166_03052 PF03060 Nitronate monooxygenase J166_03053 PF00448 SRP54-type protein, GTPase domain J166_03053 PF02881 SRP54-type protein, helical bundle domain J166_03053 PF02978 Signal peptide binding domain J166_03054 PF01578 Cytochrome C assembly protein J166_03055 PF01263 Aldose 1-epimerase J166_03056 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J166_03057 PF00722 Glycosyl hydrolases family 16 J166_03058 PF00072 Response regulator receiver domain J166_03059 PF00072 Response regulator receiver domain J166_03059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03059 PF13426 PAS domain J166_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J166_03060 PF00072 Response regulator receiver domain J166_03060 PF01627 Hpt domain J166_03060 PF00512 His Kinase A (phospho-acceptor) domain J166_03060 PF00672 HAMP domain J166_03061 PF01739 CheR methyltransferase, SAM binding domain J166_03061 PF03705 CheR methyltransferase, all-alpha domain J166_03062 PF01339 CheB methylesterase J166_03063 PF13492 GAF domain J166_03063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03063 PF13493 Domain of unknown function (DUF4118) J166_03063 PF00512 His Kinase A (phospho-acceptor) domain J166_03063 PF02702 Osmosensitive K+ channel His kinase sensor domain J166_03064 PF07237 Protein of unknown function (DUF1428) J166_03065 PF00085 Thioredoxin J166_03066 PF00593 TonB dependent receptor J166_03066 PF07715 TonB-dependent Receptor Plug Domain J166_03067 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J166_03067 PF04616 Glycosyl hydrolases family 43 J166_03068 PF00072 Response regulator receiver domain J166_03068 PF13188 PAS domain J166_03068 PF08448 PAS fold J166_03068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03068 PF00512 His Kinase A (phospho-acceptor) domain J166_03069 PF17149 Periplasmic sensor domain found in signal transduction proteins J166_03069 PF00072 Response regulator receiver domain J166_03069 PF01627 Hpt domain J166_03069 PF00512 His Kinase A (phospho-acceptor) domain J166_03069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03069 PF00672 HAMP domain J166_03071 PF13581 Histidine kinase-like ATPase domain J166_03072 PF01740 STAS domain J166_03073 PF01740 STAS domain J166_03073 PF08678 Rsbr N terminal J166_03075 PF00183 Hsp90 protein J166_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03076 PF12833 Helix-turn-helix domain J166_03078 PF05656 Protein of unknown function (DUF805) J166_03079 PF18073 Rubredoxin metal binding domain J166_03081 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J166_03082 PF00510 Cytochrome c oxidase subunit III J166_03083 PF00115 Cytochrome C and Quinol oxidase polypeptide I J166_03084 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J166_03084 PF06481 COX Aromatic Rich Motif J166_03086 PF02401 LytB protein J166_03087 PF01252 Signal peptidase (SPase) II J166_03088 PF08264 Anticodon-binding domain of tRNA J166_03088 PF00133 tRNA synthetases class I (I, L, M and V) J166_03088 PF06827 Zinc finger found in FPG and IleRS J166_03089 PF06574 FAD synthetase J166_03089 PF01687 Riboflavin kinase J166_03090 PF03023 Lipid II flippase MurJ J166_03091 PF01649 Ribosomal protein S20 J166_03092 PF01926 50S ribosome-binding GTPase J166_03092 PF01018 GTP1/OBG J166_03093 PF01016 Ribosomal L27 protein J166_03094 PF00829 Ribosomal prokaryotic L21 protein J166_03095 PF17755 UvrA DNA-binding domain J166_03095 PF00005 ABC transporter J166_03095 PF17760 UvrA interaction domain J166_03098 PF00378 Enoyl-CoA hydratase/isomerase J166_03104 PF04377 Arginine-tRNA-protein transferase, C terminus J166_03104 PF04376 Arginine-tRNA-protein transferase, N terminus J166_03106 PF02222 ATP-grasp domain J166_03111 PF00730 HhH-GPD superfamily base excision DNA repair protein J166_03114 PF00196 Bacterial regulatory proteins, luxR family J166_03114 PF00072 Response regulator receiver domain J166_03115 PF07730 Histidine kinase J166_03117 PF03775 Septum formation inhibitor MinC, C-terminal domain J166_03117 PF05209 Septum formation inhibitor MinC, N-terminal domain J166_03118 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J166_03119 PF03776 Septum formation topological specificity factor MinE J166_03121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03121 PF08521 Two-component sensor kinase N-terminal J166_03121 PF00512 His Kinase A (phospho-acceptor) domain J166_03122 PF00072 Response regulator receiver domain J166_03122 PF00486 Transcriptional regulatory protein, C terminal J166_03125 PF00884 Sulfatase J166_03125 PF08019 Phosphoethanolamine transferase EptA/EptB J166_03128 PF07690 Major Facilitator Superfamily J166_03131 PF02347 Glycine cleavage system P-protein J166_03132 PF00135 Carboxylesterase family J166_03133 PF00248 Aldo/keto reductase family J166_03134 PF00199 Catalase J166_03134 PF18011 C-terminal domain found in long catalases J166_03134 PF06628 Catalase-related immune-responsive J166_03142 PF09078 CheY binding J166_03142 PF01627 Hpt domain J166_03142 PF01584 CheW-like domain J166_03142 PF02895 Signal transducing histidine kinase, homodimeric domain J166_03142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03143 PF00672 HAMP domain J166_03143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_03143 PF02203 Tar ligand binding domain homologue J166_03144 PF01584 CheW-like domain J166_03145 PF00563 EAL domain J166_03145 PF13426 PAS domain J166_03145 PF00990 Diguanylate cyclase, GGDEF domain J166_03146 PF03705 CheR methyltransferase, all-alpha domain J166_03146 PF01739 CheR methyltransferase, SAM binding domain J166_03147 PF00072 Response regulator receiver domain J166_03147 PF01339 CheB methylesterase J166_03148 PF13091 PLD-like domain J166_03149 PF01431 Peptidase family M13 J166_03149 PF05649 Peptidase family M13 J166_03151 PF00300 Histidine phosphatase superfamily (branch 1) J166_03152 PF04493 Endonuclease V J166_03154 PF02678 Pirin J166_03154 PF05726 Pirin C-terminal cupin domain J166_03157 PF02678 Pirin J166_03157 PF05726 Pirin C-terminal cupin domain J166_03158 PF13722 5TM C-terminal transporter carbon starvation CstA J166_03158 PF02554 Carbon starvation protein CstA J166_03159 PF04328 Selenoprotein, putative J166_03167 PF13478 XdhC Rossmann domain J166_03167 PF02625 XdhC and CoxI family J166_03168 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J166_03168 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J166_03169 PF00941 FAD binding domain in molybdopterin dehydrogenase J166_03169 PF03450 CO dehydrogenase flavoprotein C-terminal domain J166_03170 PF00111 2Fe-2S iron-sulfur cluster binding domain J166_03170 PF01799 [2Fe-2S] binding domain J166_03170 PF10518 TAT (twin-arginine translocation) pathway signal sequence J166_03171 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_03171 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_03171 PF08990 Erythronolide synthase docking J166_03171 PF08659 KR domain J166_03171 PF08240 Alcohol dehydrogenase GroES-like domain J166_03171 PF00698 Acyl transferase domain J166_03171 PF00550 Phosphopantetheine attachment site J166_03171 PF09277 Erythronolide synthase, docking J166_03171 PF16197 Ketoacyl-synthetase C-terminal extension J166_03171 PF14765 Polyketide synthase dehydratase J166_03172 PF00990 Diguanylate cyclase, GGDEF domain J166_03172 PF01590 GAF domain J166_03172 PF00563 EAL domain J166_03172 PF00360 Phytochrome region J166_03173 PF00436 Single-strand binding protein family J166_03174 PF00348 Polyprenyl synthetase J166_03176 PF02875 Mur ligase family, glutamate ligase domain J166_03176 PF08245 Mur ligase middle domain J166_03179 PF00696 Amino acid kinase family J166_03179 PF01842 ACT domain J166_03180 PF02567 Phenazine biosynthesis-like protein J166_03181 PF02567 Phenazine biosynthesis-like protein J166_03183 PF02566 OsmC-like protein J166_03184 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J166_03184 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J166_03185 PF03652 Holliday junction resolvase J166_03186 PF02622 Uncharacterized ACR, COG1678 J166_03187 PF00958 GMP synthase C terminal domain J166_03187 PF00117 Glutamine amidotransferase class-I J166_03187 PF03352 Methyladenine glycosylase J166_03187 PF13302 Acetyltransferase (GNAT) domain J166_03187 PF13673 Acetyltransferase (GNAT) domain J166_03190 PF03211 Pectate lyase J166_03191 PF00437 Type II/IV secretion system protein J166_03192 PF00437 Type II/IV secretion system protein J166_03193 PF01168 Alanine racemase, N-terminal domain J166_03194 PF03807 NADP oxidoreductase coenzyme F420-dependent J166_03194 PF14748 Pyrroline-5-carboxylate reductase dimerisation J166_03196 PF01551 Peptidase family M23 J166_03200 PF01965 DJ-1/PfpI family J166_03202 PF02082 Transcriptional regulator J166_03203 PF01458 Uncharacterized protein family (UPF0051) J166_03204 PF00005 ABC transporter J166_03205 PF01458 Uncharacterized protein family (UPF0051) J166_03206 PF00266 Aminotransferase class-V J166_03208 PF00355 Rieske [2Fe-2S] domain J166_03209 PF00593 TonB dependent receptor J166_03209 PF07715 TonB-dependent Receptor Plug Domain J166_03210 PF13640 2OG-Fe(II) oxygenase superfamily J166_03210 PF18331 PKHD-type hydroxylase C-terminal domain J166_03215 PF02424 ApbE family J166_03216 PF00667 FAD binding domain J166_03216 PF00258 Flavodoxin J166_03216 PF00175 Oxidoreductase NAD-binding domain J166_03220 PF01546 Peptidase family M20/M25/M40 J166_03220 PF07687 Peptidase dimerisation domain J166_03222 PF01636 Phosphotransferase enzyme family J166_03223 PF00483 Nucleotidyl transferase J166_03224 PF00308 Bacterial dnaA protein J166_03225 PF01594 AI-2E family transporter J166_03227 PF02769 AIR synthase related protein, C-terminal domain J166_03227 PF00586 AIR synthase related protein, N-terminal domain J166_03229 PF00551 Formyl transferase J166_03233 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J166_03234 PF01722 BolA-like protein J166_03235 PF01380 SIS domain J166_03235 PF00571 CBS domain J166_03238 PF03968 OstA-like protein J166_03239 PF00005 ABC transporter J166_03240 PF04963 Sigma-54 factor, core binding domain J166_03240 PF04552 Sigma-54, DNA binding domain J166_03240 PF00309 Sigma-54 factor, Activator interacting domain (AID) J166_03241 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J166_03242 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J166_03243 PF02603 HPr Serine kinase N terminus J166_03243 PF07475 HPr Serine kinase C-terminal domain J166_03244 PF03668 P-loop ATPase protein family J166_03246 PF00381 PTS HPr component phosphorylation site J166_03247 PF00391 PEP-utilising enzyme, mobile domain J166_03247 PF02896 PEP-utilising enzyme, TIM barrel domain J166_03247 PF05524 PEP-utilising enzyme, N-terminal J166_03248 PF01769 Divalent cation transporter J166_03248 PF00571 CBS domain J166_03248 PF03448 MgtE intracellular N domain J166_03249 PF00756 Putative esterase J166_03250 PF02322 Cytochrome bd terminal oxidase subunit II J166_03251 PF01654 Cytochrome bd terminal oxidase subunit I J166_03253 PF00324 Amino acid permease J166_03254 PF00544 Pectate lyase J166_03255 PF00561 alpha/beta hydrolase fold J166_03256 PF00196 Bacterial regulatory proteins, luxR family J166_03257 PF00324 Amino acid permease J166_03262 PF12706 Beta-lactamase superfamily domain J166_03263 PF04820 Tryptophan halogenase J166_03268 PF09278 MerR, DNA binding J166_03268 PF00376 MerR family regulatory protein J166_03269 PF07690 Major Facilitator Superfamily J166_03271 PF03738 Glutathionylspermidine synthase preATP-grasp J166_03276 PF04012 PspA/IM30 family J166_03278 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J166_03278 PF01243 Pyridoxamine 5'-phosphate oxidase J166_03279 PF01202 Shikimate kinase J166_03280 PF01761 3-dehydroquinate synthase J166_03282 PF01208 Uroporphyrinogen decarboxylase (URO-D) J166_03295 PF01590 GAF domain J166_03295 PF00158 Sigma-54 interaction domain J166_03295 PF02954 Bacterial regulatory protein, Fis family J166_03296 PF07690 Major Facilitator Superfamily J166_03297 PF00672 HAMP domain J166_03297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03297 PF00512 His Kinase A (phospho-acceptor) domain J166_03297 PF17149 Periplasmic sensor domain found in signal transduction proteins J166_03297 PF00072 Response regulator receiver domain J166_03297 PF01627 Hpt domain J166_03298 PF00672 HAMP domain J166_03298 PF01627 Hpt domain J166_03298 PF00512 His Kinase A (phospho-acceptor) domain J166_03298 PF00072 Response regulator receiver domain J166_03298 PF17149 Periplasmic sensor domain found in signal transduction proteins J166_03298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03300 PF00072 Response regulator receiver domain J166_03300 PF01627 Hpt domain J166_03300 PF00512 His Kinase A (phospho-acceptor) domain J166_03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03301 PF04264 YceI-like domain J166_03305 PF03315 Serine dehydratase beta chain J166_03305 PF03313 Serine dehydratase alpha chain J166_03306 PF12697 Alpha/beta hydrolase family J166_03307 PF03447 Homoserine dehydrogenase, NAD binding domain J166_03307 PF00742 Homoserine dehydrogenase J166_03307 PF00696 Amino acid kinase family J166_03308 PF01053 Cys/Met metabolism PLP-dependent enzyme J166_03309 PF00561 alpha/beta hydrolase fold J166_03311 PF08525 Opacity-associated protein A N-terminal motif J166_03311 PF01476 LysM domain J166_03311 PF01551 Peptidase family M23 J166_03312 PF16658 Class II release factor RF3, C-terminal domain J166_03312 PF00009 Elongation factor Tu GTP binding domain J166_03313 PF03006 Haemolysin-III related J166_03314 PF05170 AsmA family J166_03315 PF00478 IMP dehydrogenase / GMP reductase domain J166_03315 PF00571 CBS domain J166_03316 PF00535 Glycosyl transferase family 2 J166_03317 PF00912 Transglycosylase J166_03318 PF01430 Hsp33 protein J166_03320 PF07715 TonB-dependent Receptor Plug Domain J166_03320 PF00593 TonB dependent receptor J166_03322 PF00440 Bacterial regulatory proteins, tetR family J166_03323 PF00561 alpha/beta hydrolase fold J166_03324 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J166_03324 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_03324 PF09317 Domain of unknown function (DUF1974) J166_03329 PF01597 Glycine cleavage H-protein J166_03330 PF08669 Glycine cleavage T-protein C-terminal barrel domain J166_03330 PF01571 Aminomethyltransferase folate-binding domain J166_03332 PF01145 SPFH domain / Band 7 family J166_03332 PF16200 C-terminal region of band_7 J166_03333 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J166_03334 PF03819 MazG nucleotide pyrophosphohydrolase domain J166_03335 PF00459 Inositol monophosphatase family J166_03336 PF00293 NUDIX domain J166_03337 PF00202 Aminotransferase class-III J166_03338 PF04452 RNA methyltransferase J166_03339 PF02685 Glucokinase J166_03342 PF01476 LysM domain J166_03342 PF00704 Glycosyl hydrolases family 18 J166_03343 PF00728 Glycosyl hydrolase family 20, catalytic domain J166_03343 PF07691 PA14 domain J166_03343 PF02838 Glycosyl hydrolase family 20, domain 2 J166_03345 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_03345 PF14310 Fibronectin type III-like domain J166_03345 PF01915 Glycosyl hydrolase family 3 C-terminal domain J166_03345 PF07691 PA14 domain J166_03347 PF01301 Glycosyl hydrolases family 35 J166_03348 PF13520 Amino acid permease J166_03350 PF02056 Family 4 glycosyl hydrolase J166_03350 PF11975 Family 4 glycosyl hydrolase C-terminal domain J166_03352 PF07971 Glycosyl hydrolase family 92 J166_03352 PF17678 Glycosyl hydrolase family 92 N-terminal domain J166_03353 PF01301 Glycosyl hydrolases family 35 J166_03359 PF03932 CutC family J166_03360 PF01112 Asparaginase J166_03361 PF13302 Acetyltransferase (GNAT) domain J166_03364 PF00072 Response regulator receiver domain J166_03364 PF01584 CheW-like domain J166_03364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03364 PF01627 Hpt domain J166_03365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_03365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J166_03367 PF00072 Response regulator receiver domain J166_03368 PF00072 Response regulator receiver domain J166_03369 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J166_03369 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J166_03371 PF03747 ADP-ribosylglycohydrolase J166_03372 PF00814 Glycoprotease family J166_03373 PF04851 Type III restriction enzyme, res subunit J166_03373 PF13307 Helicase C-terminal domain J166_03375 PF14814 Bifunctional transglycosylase second domain J166_03375 PF00905 Penicillin binding protein transpeptidase domain J166_03375 PF00912 Transglycosylase J166_03376 PF00535 Glycosyl transferase family 2 J166_03378 PF02824 TGS domain J166_03378 PF13291 ACT domain J166_03378 PF04607 Region found in RelA / SpoT proteins J166_03379 PF12706 Beta-lactamase superfamily domain J166_03380 PF03070 TENA/THI-4/PQQC family J166_03381 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J166_03382 PF04055 Radical SAM superfamily J166_03382 PF13186 Iron-sulfur cluster-binding domain J166_03385 PF02685 Glucokinase J166_03387 PF00271 Helicase conserved C-terminal domain J166_03387 PF00270 DEAD/DEAH box helicase J166_03387 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J166_03387 PF04408 Helicase associated domain (HA2) J166_03387 PF11898 Domain of unknown function (DUF3418) J166_03388 PF00210 Ferritin-like domain J166_03389 PF00271 Helicase conserved C-terminal domain J166_03389 PF00570 HRDC domain J166_03389 PF00270 DEAD/DEAH box helicase J166_03389 PF16124 RecQ zinc-binding J166_03389 PF09382 RQC domain J166_03396 PF00672 HAMP domain J166_03396 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_03396 PF02203 Tar ligand binding domain homologue J166_03400 PF13426 PAS domain J166_03400 PF07536 HWE histidine kinase J166_03400 PF13581 Histidine kinase-like ATPase domain J166_03401 PF06508 Queuosine biosynthesis protein QueC J166_03403 PF04055 Radical SAM superfamily J166_03405 PF00691 OmpA family J166_03406 PF04052 TolB amino-terminal domain J166_03406 PF07676 WD40-like Beta Propeller Repeat J166_03408 PF02472 Biopolymer transport protein ExbD/TolR J166_03409 PF01618 MotA/TolQ/ExbB proton channel family J166_03410 PF03061 Thioesterase superfamily J166_03411 PF05496 Holliday junction DNA helicase RuvB P-loop domain J166_03411 PF05491 RuvB C-terminal winged helix domain J166_03411 PF17864 RuvB AAA lid domain J166_03413 PF02705 K+ potassium transporter J166_03414 PF07499 RuvA, C-terminal domain J166_03414 PF01330 RuvA N terminal domain J166_03415 PF02075 Crossover junction endodeoxyribonuclease RuvC J166_03416 PF01709 Transcriptional regulator J166_03419 PF02938 GAD domain J166_03419 PF01336 OB-fold nucleic acid binding domain J166_03419 PF00152 tRNA synthetases class II (D, K and N) J166_03422 PF07690 Major Facilitator Superfamily J166_03425 PF04185 Phosphoesterase family J166_03425 PF05506 Domain of unknown function (DUF756) J166_03428 PF03466 LysR substrate binding domain J166_03428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_03430 PF12848 ABC transporter J166_03430 PF00005 ABC transporter J166_03431 PF00593 TonB dependent receptor J166_03431 PF07715 TonB-dependent Receptor Plug Domain J166_03433 PF07715 TonB-dependent Receptor Plug Domain J166_03433 PF00593 TonB dependent receptor J166_03434 PF07715 TonB-dependent Receptor Plug Domain J166_03434 PF00593 TonB dependent receptor J166_03435 PF00067 Cytochrome P450 J166_03436 PF02254 TrkA-N domain J166_03436 PF00999 Sodium/hydrogen exchanger family J166_03441 PF07660 Secretin and TonB N terminus short domain J166_03441 PF00593 TonB dependent receptor J166_03441 PF07715 TonB-dependent Receptor Plug Domain J166_03443 PF06276 Ferric iron reductase FhuF-like transporter J166_03443 PF04183 IucA / IucC family J166_03444 PF07690 Major Facilitator Superfamily J166_03446 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J166_03446 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J166_03449 PF02654 Cobalamin-5-phosphate synthase J166_03451 PF02277 Phosphoribosyltransferase J166_03452 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J166_03453 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J166_03453 PF07685 CobB/CobQ-like glutamine amidotransferase domain J166_03454 PF00155 Aminotransferase class I and II J166_03456 PF17113 Regulatory signalling modulator protein AmpE J166_03456 PF03186 CobD/Cbib protein J166_03457 PF12557 Cob(I)alamin adenosyltransferase N terminal J166_03457 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J166_03460 PF00593 TonB dependent receptor J166_03460 PF07715 TonB-dependent Receptor Plug Domain J166_03462 PF00004 ATPase family associated with various cellular activities (AAA) J166_03462 PF02861 Clp amino terminal domain, pathogenicity island component J166_03462 PF07724 AAA domain (Cdc48 subfamily) J166_03462 PF17871 AAA lid domain J166_03462 PF10431 C-terminal, D2-small domain, of ClpB protein J166_03463 PF00005 ABC transporter J166_03464 PF00528 Binding-protein-dependent transport system inner membrane component J166_03465 PF09084 NMT1/THI5 like J166_03466 PF00248 Aldo/keto reductase family J166_03468 PF00593 TonB dependent receptor J166_03468 PF07715 TonB-dependent Receptor Plug Domain J166_03469 PF01541 GIY-YIG catalytic domain J166_03476 PF00593 TonB dependent receptor J166_03476 PF07715 TonB-dependent Receptor Plug Domain J166_03477 PF02358 Trehalose-phosphatase J166_03478 PF00723 Glycosyl hydrolases family 15 J166_03479 PF00982 Glycosyltransferase family 20 J166_03480 PF01011 PQQ enzyme repeat J166_03481 PF00672 HAMP domain J166_03481 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_03481 PF02203 Tar ligand binding domain homologue J166_03482 PF04134 Protein of unknown function, DUF393 J166_03485 PF00849 RNA pseudouridylate synthase J166_03486 PF13525 Outer membrane lipoprotein J166_03488 PF02540 NAD synthase J166_03488 PF00795 Carbon-nitrogen hydrolase J166_03490 PF01527 Transposase J166_03491 PF13276 HTH-like domain J166_03491 PF00665 Integrase core domain J166_03491 PF13333 Integrase core domain J166_03494 PF13406 Transglycosylase SLT domain J166_03495 PF01526 Tn3 transposase DDE domain J166_03495 PF13700 Domain of unknown function (DUF4158) J166_03501 PF02796 Helix-turn-helix domain of resolvase J166_03501 PF00665 Integrase core domain J166_03502 PF01695 IstB-like ATP binding protein J166_03508 PF01527 Transposase J166_03509 PF13276 HTH-like domain J166_03509 PF00665 Integrase core domain J166_03509 PF13333 Integrase core domain J166_03515 PF00180 Isocitrate/isopropylmalate dehydrogenase J166_03517 PF00462 Glutaredoxin J166_03518 PF13181 Tetratricopeptide repeat J166_03518 PF01435 Peptidase family M48 J166_03519 PF00072 Response regulator receiver domain J166_03519 PF00486 Transcriptional regulatory protein, C terminal J166_03520 PF00989 PAS fold J166_03520 PF00512 His Kinase A (phospho-acceptor) domain J166_03520 PF11808 Phosphate regulon sensor protein PhoR J166_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03521 PF13090 Polyphosphate kinase C-terminal domain 2 J166_03521 PF17941 Polyphosphate kinase C-terminal domain 1 J166_03521 PF02503 Polyphosphate kinase middle domain J166_03521 PF13089 Polyphosphate kinase N-terminal domain J166_03522 PF02541 Ppx/GppA phosphatase family J166_03523 PF00534 Glycosyl transferases group 1 J166_03523 PF13439 Glycosyltransferase Family 4 J166_03524 PF01569 PAP2 superfamily J166_03526 PF00149 Calcineurin-like phosphoesterase J166_03530 PF04305 Protein of unknown function (DUF455) J166_03531 PF00156 Phosphoribosyl transferase domain J166_03534 PF02875 Mur ligase family, glutamate ligase domain J166_03534 PF08245 Mur ligase middle domain J166_03536 PF00300 Histidine phosphatase superfamily (branch 1) J166_03537 PF10459 Peptidase S46 J166_03538 PF10459 Peptidase S46 J166_03539 PF04185 Phosphoesterase family J166_03539 PF05506 Domain of unknown function (DUF756) J166_03541 PF00107 Zinc-binding dehydrogenase J166_03541 PF08240 Alcohol dehydrogenase GroES-like domain J166_03543 PF00005 ABC transporter J166_03543 PF17850 CysA C-terminal regulatory domain J166_03543 PF12857 TOBE-like domain J166_03544 PF00528 Binding-protein-dependent transport system inner membrane component J166_03545 PF00528 Binding-protein-dependent transport system inner membrane component J166_03547 PF00155 Aminotransferase class I and II J166_03549 PF00849 RNA pseudouridylate synthase J166_03551 PF00691 OmpA family J166_03551 PF05736 OprF membrane domain J166_03552 PF08240 Alcohol dehydrogenase GroES-like domain J166_03552 PF00107 Zinc-binding dehydrogenase J166_03553 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J166_03553 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_03556 PF02798 Glutathione S-transferase, N-terminal domain J166_03556 PF00043 Glutathione S-transferase, C-terminal domain J166_03557 PF00056 lactate/malate dehydrogenase, NAD binding domain J166_03557 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J166_03558 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J166_03561 PF01425 Amidase J166_03563 PF01474 Class-II DAHP synthetase family J166_03565 PF02600 Disulfide bond formation protein DsbB J166_03566 PF01196 Ribosomal protein L17 J166_03567 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J166_03567 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J166_03567 PF01000 RNA polymerase Rpb3/RpoA insert domain J166_03568 PF01479 S4 domain J166_03568 PF00163 Ribosomal protein S4/S9 N-terminal domain J166_03569 PF00411 Ribosomal protein S11 J166_03570 PF00416 Ribosomal protein S13/S18 J166_03571 PF00344 SecY translocase J166_03572 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J166_03573 PF00327 Ribosomal protein L30p/L7e J166_03574 PF00333 Ribosomal protein S5, N-terminal domain J166_03574 PF03719 Ribosomal protein S5, C-terminal domain J166_03575 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J166_03576 PF00347 Ribosomal protein L6 J166_03577 PF00410 Ribosomal protein S8 J166_03578 PF00253 Ribosomal protein S14p/S29e J166_03579 PF00673 ribosomal L5P family C-terminus J166_03579 PF00281 Ribosomal protein L5 J166_03580 PF00467 KOW motif J166_03580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J166_03581 PF00238 Ribosomal protein L14p/L23e J166_03582 PF00366 Ribosomal protein S17 J166_03583 PF00831 Ribosomal L29 protein J166_03584 PF00252 Ribosomal protein L16p/L10e J166_03585 PF00189 Ribosomal protein S3, C-terminal domain J166_03585 PF07650 KH domain J166_03586 PF00237 Ribosomal protein L22p/L17e J166_03587 PF00203 Ribosomal protein S19 J166_03588 PF00181 Ribosomal Proteins L2, RNA binding domain J166_03588 PF03947 Ribosomal Proteins L2, C-terminal domain J166_03589 PF00276 Ribosomal protein L23 J166_03590 PF00573 Ribosomal protein L4/L1 family J166_03591 PF00297 Ribosomal protein L3 J166_03592 PF00338 Ribosomal protein S10p/S20e J166_03593 PF03143 Elongation factor Tu C-terminal domain J166_03593 PF03144 Elongation factor Tu domain 2 J166_03593 PF00009 Elongation factor Tu GTP binding domain J166_03594 PF03764 Elongation factor G, domain IV J166_03594 PF00009 Elongation factor Tu GTP binding domain J166_03594 PF14492 Elongation Factor G, domain II J166_03594 PF00679 Elongation factor G C-terminus J166_03594 PF03144 Elongation factor Tu domain 2 J166_03595 PF00177 Ribosomal protein S7p/S5e J166_03596 PF00164 Ribosomal protein S12/S23 J166_03597 PF04983 RNA polymerase Rpb1, domain 3 J166_03597 PF04997 RNA polymerase Rpb1, domain 1 J166_03597 PF05000 RNA polymerase Rpb1, domain 4 J166_03597 PF00623 RNA polymerase Rpb1, domain 2 J166_03597 PF04998 RNA polymerase Rpb1, domain 5 J166_03598 PF10385 RNA polymerase beta subunit external 1 domain J166_03598 PF04565 RNA polymerase Rpb2, domain 3 J166_03598 PF04560 RNA polymerase Rpb2, domain 7 J166_03598 PF00562 RNA polymerase Rpb2, domain 6 J166_03598 PF04563 RNA polymerase beta subunit J166_03598 PF04561 RNA polymerase Rpb2, domain 2 J166_03600 PF16320 Ribosomal protein L7/L12 dimerisation domain J166_03600 PF00542 Ribosomal protein L7/L12 C-terminal domain J166_03601 PF00466 Ribosomal protein L10 J166_03602 PF00687 Ribosomal protein L1p/L10e family J166_03603 PF03946 Ribosomal protein L11, N-terminal domain J166_03603 PF00298 Ribosomal protein L11, RNA binding domain J166_03604 PF00467 KOW motif J166_03604 PF02357 Transcription termination factor nusG J166_03605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J166_03607 PF03143 Elongation factor Tu C-terminal domain J166_03607 PF00009 Elongation factor Tu GTP binding domain J166_03607 PF03144 Elongation factor Tu domain 2 J166_03611 PF06071 Protein of unknown function (DUF933) J166_03611 PF01926 50S ribosome-binding GTPase J166_03612 PF01195 Peptidyl-tRNA hydrolase J166_03613 PF01386 Ribosomal L25p family J166_03613 PF14693 Ribosomal protein TL5, C-terminal domain J166_03614 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J166_03614 PF14572 Phosphoribosyl synthetase-associated domain J166_03616 PF00288 GHMP kinases N terminal domain J166_03616 PF08544 GHMP kinases C terminal J166_03617 PF03550 Outer membrane lipoprotein LolB J166_03619 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J166_03619 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J166_03619 PF01488 Shikimate / quinate 5-dehydrogenase J166_03620 PF00472 RF-1 domain J166_03620 PF03462 PCRF domain J166_03622 PF00994 Probable molybdopterin binding domain J166_03623 PF03976 Polyphosphate kinase 2 (PPK2) J166_03625 PF00708 Acylphosphatase J166_03626 PF08534 Redoxin J166_03627 PF03631 Virulence factor BrkB J166_03628 PF03358 NADPH-dependent FMN reductase J166_03631 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J166_03631 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J166_03633 PF04073 Aminoacyl-tRNA editing domain J166_03634 PF00082 Subtilase family J166_03634 PF04151 Bacterial pre-peptidase C-terminal domain J166_03635 PF00082 Subtilase family J166_03635 PF04151 Bacterial pre-peptidase C-terminal domain J166_03636 PF00082 Subtilase family J166_03636 PF04151 Bacterial pre-peptidase C-terminal domain J166_03637 PF01063 Amino-transferase class IV J166_03640 PF02233 NAD(P) transhydrogenase beta subunit J166_03641 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J166_03645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J166_03645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J166_03645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J166_03651 PF00476 DNA polymerase family A J166_03651 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J166_03651 PF01612 3'-5' exonuclease J166_03651 PF01367 5'-3' exonuclease, C-terminal SAM fold J166_03652 PF00293 NUDIX domain J166_03654 PF00561 alpha/beta hydrolase fold J166_03655 PF17827 PrmC N-terminal domain J166_03655 PF05175 Methyltransferase small domain J166_03656 PF10417 C-terminal domain of 1-Cys peroxiredoxin J166_03656 PF00578 AhpC/TSA family J166_03657 PF13192 Thioredoxin domain J166_03657 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_03658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_03658 PF03466 LysR substrate binding domain J166_03659 PF14760 Rnk N-terminus J166_03659 PF01272 Transcription elongation factor, GreA/GreB, C-term J166_03660 PF00923 Transaldolase/Fructose-6-phosphate aldolase J166_03662 PF01625 Peptide methionine sulfoxide reductase J166_03664 PF00196 Bacterial regulatory proteins, luxR family J166_03664 PF00072 Response regulator receiver domain J166_03665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J166_03665 PF01627 Hpt domain J166_03665 PF00672 HAMP domain J166_03665 PF00072 Response regulator receiver domain J166_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03665 PF00512 His Kinase A (phospho-acceptor) domain J166_03666 PF00072 Response regulator receiver domain J166_03666 PF00990 Diguanylate cyclase, GGDEF domain J166_03669 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J166_03669 PF00749 tRNA synthetases class I (E and Q), catalytic domain J166_03670 PF00892 EamA-like transporter family J166_03673 PF01728 FtsJ-like methyltransferase J166_03673 PF18125 RlmM ferredoxin-like domain J166_03674 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J166_03674 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J166_03675 PF08450 SMP-30/Gluconolactonase/LRE-like region J166_03679 PF00378 Enoyl-CoA hydratase/isomerase J166_03680 PF00171 Aldehyde dehydrogenase family J166_03681 PF13193 AMP-binding enzyme C-terminal domain J166_03681 PF00501 AMP-binding enzyme J166_03682 PF03466 LysR substrate binding domain J166_03682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_03683 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J166_03683 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J166_03684 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J166_03685 PF00392 Bacterial regulatory proteins, gntR family J166_03685 PF07729 FCD domain J166_03689 PF01494 FAD binding domain J166_03690 PF01494 FAD binding domain J166_03692 PF01923 Cobalamin adenosyltransferase J166_03693 PF00850 Histone deacetylase domain J166_03696 PF04453 LPS transport system D J166_03696 PF03968 OstA-like protein J166_03697 PF09312 SurA N-terminal domain J166_03697 PF00639 PPIC-type PPIASE domain J166_03698 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J166_03699 PF00398 Ribosomal RNA adenine dimethylase J166_03700 PF04379 ApaG domain J166_03701 PF00149 Calcineurin-like phosphoesterase J166_03702 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J166_03702 PF00005 ABC transporter J166_03704 PF00528 Binding-protein-dependent transport system inner membrane component J166_03705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J166_03706 PF00296 Luciferase-like monooxygenase J166_03710 PF03358 NADPH-dependent FMN reductase J166_03711 PF00296 Luciferase-like monooxygenase J166_03713 PF00528 Binding-protein-dependent transport system inner membrane component J166_03714 PF00005 ABC transporter J166_03715 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J166_03715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J166_03716 PF00158 Sigma-54 interaction domain J166_03717 PF00186 Dihydrofolate reductase J166_03719 PF00303 Thymidylate synthase J166_03720 PF01790 Prolipoprotein diacylglyceryl transferase J166_03724 PF01219 Prokaryotic diacylglycerol kinase J166_03726 PF00512 His Kinase A (phospho-acceptor) domain J166_03726 PF08521 Two-component sensor kinase N-terminal J166_03726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03727 PF00486 Transcriptional regulatory protein, C terminal J166_03727 PF00072 Response regulator receiver domain J166_03728 PF13472 GDSL-like Lipase/Acylhydrolase family J166_03729 PF00005 ABC transporter J166_03731 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J166_03733 PF00005 ABC transporter J166_03734 PF00528 Binding-protein-dependent transport system inner membrane component J166_03738 PF07715 TonB-dependent Receptor Plug Domain J166_03738 PF00593 TonB dependent receptor J166_03740 PF00248 Aldo/keto reductase family J166_03741 PF07670 Nucleoside recognition J166_03741 PF07662 Na+ dependent nucleoside transporter C-terminus J166_03741 PF01773 Na+ dependent nucleoside transporter N-terminus J166_03742 PF00294 pfkB family carbohydrate kinase J166_03745 PF01207 Dihydrouridine synthase (Dus) J166_03746 PF13649 Methyltransferase domain J166_03748 PF00438 S-adenosylmethionine synthetase, N-terminal domain J166_03748 PF02772 S-adenosylmethionine synthetase, central domain J166_03748 PF02773 S-adenosylmethionine synthetase, C-terminal domain J166_03749 PF00328 Histidine phosphatase superfamily (branch 2) J166_03754 PF00311 Phosphoenolpyruvate carboxylase J166_03757 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J166_03757 PF05221 S-adenosyl-L-homocysteine hydrolase J166_03758 PF13649 Methyltransferase domain J166_03764 PF00128 Alpha amylase, catalytic domain J166_03765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J166_03767 PF00082 Subtilase family J166_03767 PF09286 Pro-kumamolisin, activation domain J166_03768 PF08240 Alcohol dehydrogenase GroES-like domain J166_03768 PF16197 Ketoacyl-synthetase C-terminal extension J166_03768 PF00698 Acyl transferase domain J166_03768 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_03768 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_03768 PF08659 KR domain J166_03768 PF00550 Phosphopantetheine attachment site J166_03768 PF14765 Polyketide synthase dehydratase J166_03768 PF00107 Zinc-binding dehydrogenase J166_03771 PF02219 Methylenetetrahydrofolate reductase J166_03773 PF00293 NUDIX domain J166_03774 PF07517 SecA DEAD-like domain J166_03774 PF02810 SEC-C motif J166_03774 PF01043 SecA preprotein cross-linking domain J166_03774 PF07516 SecA Wing and Scaffold domain J166_03775 PF01476 LysM domain J166_03775 PF08525 Opacity-associated protein A N-terminal motif J166_03775 PF01551 Peptidase family M23 J166_03777 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J166_03778 PF12327 FtsZ family, C-terminal domain J166_03778 PF00091 Tubulin/FtsZ family, GTPase domain J166_03779 PF02491 SHS2 domain inserted in FTSA J166_03780 PF03799 Cell division protein FtsQ J166_03780 PF08478 POTRA domain, FtsQ-type J166_03781 PF07478 D-ala D-ala ligase C-terminus J166_03781 PF01820 D-ala D-ala ligase N-terminus J166_03782 PF08245 Mur ligase middle domain J166_03782 PF02875 Mur ligase family, glutamate ligase domain J166_03782 PF01225 Mur ligase family, catalytic domain J166_03783 PF03033 Glycosyltransferase family 28 N-terminal domain J166_03783 PF04101 Glycosyltransferase family 28 C-terminal domain J166_03784 PF04101 Glycosyltransferase family 28 C-terminal domain J166_03784 PF03033 Glycosyltransferase family 28 N-terminal domain J166_03785 PF01098 Cell cycle protein J166_03786 PF00953 Glycosyl transferase family 4 J166_03787 PF08245 Mur ligase middle domain J166_03787 PF02875 Mur ligase family, glutamate ligase domain J166_03787 PF01225 Mur ligase family, catalytic domain J166_03788 PF02875 Mur ligase family, glutamate ligase domain J166_03788 PF08245 Mur ligase middle domain J166_03788 PF01225 Mur ligase family, catalytic domain J166_03789 PF00905 Penicillin binding protein transpeptidase domain J166_03789 PF03717 Penicillin-binding Protein dimerisation domain J166_03790 PF04999 Cell division protein FtsL J166_03791 PF01795 MraW methylase family J166_03792 PF02381 MraZ protein, putative antitoxin-like J166_03798 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J166_03800 PF02021 Uncharacterised protein family UPF0102 J166_03801 PF04307 LexA-binding, inner membrane-associated putative hydrolase J166_03802 PF01565 FAD binding domain J166_03802 PF02913 FAD linked oxidases, C-terminal domain J166_03805 PF00486 Transcriptional regulatory protein, C terminal J166_03805 PF00072 Response regulator receiver domain J166_03806 PF13493 Domain of unknown function (DUF4118) J166_03806 PF00512 His Kinase A (phospho-acceptor) domain J166_03806 PF02702 Osmosensitive K+ channel His kinase sensor domain J166_03806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03806 PF13492 GAF domain J166_03807 PF02669 K+-transporting ATPase, c chain J166_03809 PF03814 Potassium-transporting ATPase A subunit J166_03813 PF00586 AIR synthase related protein, N-terminal domain J166_03813 PF02769 AIR synthase related protein, C-terminal domain J166_03814 PF01029 NusB family J166_03815 PF00885 6,7-dimethyl-8-ribityllumazine synthase J166_03816 PF00925 GTP cyclohydrolase II J166_03816 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J166_03817 PF00677 Lumazine binding domain J166_03820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J166_03820 PF01872 RibD C-terminal domain J166_03822 PF03477 ATP cone domain J166_03823 PF00464 Serine hydroxymethyltransferase J166_03825 PF12848 ABC transporter J166_03825 PF00005 ABC transporter J166_03827 PF00892 EamA-like transporter family J166_03828 PF02567 Phenazine biosynthesis-like protein J166_03829 PF00155 Aminotransferase class I and II J166_03829 PF00392 Bacterial regulatory proteins, gntR family J166_03830 PF00756 Putative esterase J166_03831 PF04828 Glutathione-dependent formaldehyde-activating enzyme J166_03832 PF00107 Zinc-binding dehydrogenase J166_03832 PF08240 Alcohol dehydrogenase GroES-like domain J166_03833 PF02583 Metal-sensitive transcriptional repressor J166_03836 PF00072 Response regulator receiver domain J166_03836 PF00486 Transcriptional regulatory protein, C terminal J166_03837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03837 PF00512 His Kinase A (phospho-acceptor) domain J166_03837 PF00672 HAMP domain J166_03838 PF04107 Glutamate-cysteine ligase family 2(GCS2) J166_03840 PF10996 Beta-Casp domain J166_03840 PF00753 Metallo-beta-lactamase superfamily J166_03840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J166_03841 PF01926 50S ribosome-binding GTPase J166_03842 PF00034 Cytochrome c J166_03845 PF01323 DSBA-like thioredoxin domain J166_03847 PF02028 BCCT, betaine/carnitine/choline family transporter J166_03848 PF00171 Aldehyde dehydrogenase family J166_03849 PF00732 GMC oxidoreductase J166_03849 PF05199 GMC oxidoreductase J166_03850 PF01966 HD domain J166_03850 PF12627 Probable RNA and SrmB- binding site of polymerase A J166_03850 PF01743 Poly A polymerase head domain J166_03852 PF01979 Amidohydrolase family J166_03853 PF01380 SIS domain J166_03854 PF00356 Bacterial regulatory proteins, lacI family J166_03855 PF07690 Major Facilitator Superfamily J166_03860 PF16355 Domain of unknown function (DUF4982) J166_03860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J166_03860 PF00703 Glycosyl hydrolases family 2 J166_03860 PF02837 Glycosyl hydrolases family 2, sugar binding domain J166_03860 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J166_03865 PF03934 Type II secretion system (T2SS), protein K J166_03866 PF11612 Type II secretion system (T2SS), protein J J166_03866 PF07963 Prokaryotic N-terminal methylation motif J166_03868 PF12019 Type II transport protein GspH J166_03868 PF07963 Prokaryotic N-terminal methylation motif J166_03869 PF08334 Type II secretion system (T2SS), protein G J166_03869 PF07963 Prokaryotic N-terminal methylation motif J166_03870 PF00482 Type II secretion system (T2SS), protein F J166_03871 PF00437 Type II/IV secretion system protein J166_03872 PF00263 Bacterial type II and III secretion system protein J166_03872 PF03958 Bacterial type II/III secretion system short domain J166_03880 PF00106 short chain dehydrogenase J166_03881 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J166_03882 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03882 PF00512 His Kinase A (phospho-acceptor) domain J166_03883 PF00072 Response regulator receiver domain J166_03884 PF08446 PAS fold J166_03884 PF00512 His Kinase A (phospho-acceptor) domain J166_03884 PF01590 GAF domain J166_03884 PF00360 Phytochrome region J166_03884 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03885 PF04972 BON domain J166_03886 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J166_03886 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J166_03887 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J166_03887 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J166_03894 PF01467 Cytidylyltransferase-like J166_03894 PF00293 NUDIX domain J166_03896 PF03466 LysR substrate binding domain J166_03896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_03898 PF00595 PDZ domain J166_03898 PF17804 Tail specific protease N-terminal domain J166_03898 PF03572 Peptidase family S41 J166_03898 PF11818 C-terminal domain of tail specific protease (DUF3340) J166_03899 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J166_03899 PF04055 Radical SAM superfamily J166_03900 PF03099 Biotin/lipoate A/B protein ligase family J166_03901 PF04359 Protein of unknown function (DUF493) J166_03903 PF00768 D-alanyl-D-alanine carboxypeptidase J166_03903 PF07943 Penicillin-binding protein 5, C-terminal domain J166_03904 PF05036 Sporulation related domain J166_03904 PF03330 Lytic transglycolase J166_03905 PF13406 Transglycosylase SLT domain J166_03906 PF00295 Glycosyl hydrolases family 28 J166_03907 PF01098 Cell cycle protein J166_03908 PF00905 Penicillin binding protein transpeptidase domain J166_03908 PF03717 Penicillin-binding Protein dimerisation domain J166_03910 PF04085 rod shape-determining protein MreC J166_03912 PF00294 pfkB family carbohydrate kinase J166_03913 PF00158 Sigma-54 interaction domain J166_03913 PF01590 GAF domain J166_03913 PF02954 Bacterial regulatory protein, Fis family J166_03915 PF00107 Zinc-binding dehydrogenase J166_03915 PF08240 Alcohol dehydrogenase GroES-like domain J166_03918 PF00497 Bacterial extracellular solute-binding proteins, family 3 J166_03919 PF13360 PQQ-like domain J166_03922 PF11838 ERAP1-like C-terminal domain J166_03922 PF01433 Peptidase family M1 domain J166_03923 PF03707 Bacterial signalling protein N terminal repeat J166_03923 PF00990 Diguanylate cyclase, GGDEF domain J166_03923 PF00563 EAL domain J166_03924 PF01209 ubiE/COQ5 methyltransferase family J166_03926 PF13533 Biotin-lipoyl like J166_03927 PF13673 Acetyltransferase (GNAT) domain J166_03929 PF00004 ATPase family associated with various cellular activities (AAA) J166_03929 PF07724 AAA domain (Cdc48 subfamily) J166_03929 PF10431 C-terminal, D2-small domain, of ClpB protein J166_03930 PF00227 Proteasome subunit J166_03931 PF00589 Phage integrase family J166_03931 PF02899 Phage integrase, N-terminal SAM-like domain J166_03933 PF01678 Diaminopimelate epimerase J166_03935 PF04304 Protein of unknown function (DUF454) J166_03936 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J166_03936 PF00326 Prolyl oligopeptidase family J166_03937 PF00155 Aminotransferase class I and II J166_03939 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J166_03939 PF00326 Prolyl oligopeptidase family J166_03944 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J166_03944 PF03900 Porphobilinogen deaminase, C-terminal domain J166_03945 PF04397 LytTr DNA-binding domain J166_03945 PF00072 Response regulator receiver domain J166_03946 PF06580 Histidine kinase J166_03946 PF07694 5TMR of 5TMR-LYT J166_03948 PF13632 Glycosyl transferase family group 2 J166_03951 PF00990 Diguanylate cyclase, GGDEF domain J166_03951 PF08448 PAS fold J166_03952 PF01740 STAS domain J166_03952 PF00916 Sulfate permease family J166_03953 PF00553 Cellulose binding domain J166_03953 PF00150 Cellulase (glycosyl hydrolase family 5) J166_03954 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_03954 PF00672 HAMP domain J166_03954 PF02203 Tar ligand binding domain homologue J166_03955 PF08448 PAS fold J166_03955 PF08447 PAS fold J166_03955 PF00563 EAL domain J166_03955 PF00990 Diguanylate cyclase, GGDEF domain J166_03960 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J166_03960 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J166_03962 PF01204 Trehalase J166_03964 PF01544 CorA-like Mg2+ transporter protein J166_03966 PF00324 Amino acid permease J166_03968 PF01695 IstB-like ATP binding protein J166_03969 PF00665 Integrase core domain J166_03969 PF02796 Helix-turn-helix domain of resolvase J166_03970 PF00497 Bacterial extracellular solute-binding proteins, family 3 J166_03971 PF00892 EamA-like transporter family J166_03976 PF00990 Diguanylate cyclase, GGDEF domain J166_03976 PF05230 MASE2 domain J166_03977 PF07759 Protein of unknown function (DUF1615) J166_03978 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J166_03978 PF00326 Prolyl oligopeptidase family J166_03979 PF03176 MMPL family J166_03979 PF12823 Domain of unknown function (DUF3817) J166_03984 PF13409 Glutathione S-transferase, N-terminal domain J166_03989 PF04002 RadC-like JAB domain J166_03994 PF13426 PAS domain J166_03994 PF00072 Response regulator receiver domain J166_03994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_03995 PF02796 Helix-turn-helix domain of resolvase J166_03995 PF00665 Integrase core domain J166_03996 PF01695 IstB-like ATP binding protein J166_04001 PF00873 AcrB/AcrD/AcrF family J166_04002 PF00873 AcrB/AcrD/AcrF family J166_04003 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_04003 PF00529 HlyD membrane-fusion protein of T1SS J166_04004 PF00009 Elongation factor Tu GTP binding domain J166_04005 PF01507 Phosphoadenosine phosphosulfate reductase family J166_04006 PF00667 FAD binding domain J166_04006 PF00175 Oxidoreductase NAD-binding domain J166_04006 PF00258 Flavodoxin J166_04007 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J166_04007 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J166_04008 PF01507 Phosphoadenosine phosphosulfate reductase family J166_04012 PF00072 Response regulator receiver domain J166_04012 PF01627 Hpt domain J166_04012 PF00512 His Kinase A (phospho-acceptor) domain J166_04012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04014 PF03466 LysR substrate binding domain J166_04014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04015 PF10414 Sirohaem synthase dimerisation region J166_04015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J166_04015 PF14824 Sirohaem biosynthesis protein central J166_04016 PF00291 Pyridoxal-phosphate dependent enzyme J166_04018 PF01661 Macro domain J166_04019 PF00274 Fructose-bisphosphate aldolase class-I J166_04020 PF02887 Pyruvate kinase, alpha/beta domain J166_04020 PF00224 Pyruvate kinase, barrel domain J166_04022 PF00162 Phosphoglycerate kinase J166_04027 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J166_04027 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J166_04029 PF03922 OmpW family J166_04030 PF03922 OmpW family J166_04032 PF00753 Metallo-beta-lactamase superfamily J166_04032 PF04273 Putative phosphatase (DUF442) J166_04034 PF00528 Binding-protein-dependent transport system inner membrane component J166_04035 PF03459 TOBE domain J166_04035 PF00005 ABC transporter J166_04042 PF01476 LysM domain J166_04042 PF03734 L,D-transpeptidase catalytic domain J166_04043 PF01551 Peptidase family M23 J166_04043 PF04225 Opacity-associated protein A LysM-like domain J166_04045 PF07715 TonB-dependent Receptor Plug Domain J166_04045 PF00593 TonB dependent receptor J166_04046 PF12146 Serine aminopeptidase, S33 J166_04047 PF00456 Transketolase, thiamine diphosphate binding domain J166_04047 PF02780 Transketolase, C-terminal domain J166_04047 PF02779 Transketolase, pyrimidine binding domain J166_04048 PF00375 Sodium:dicarboxylate symporter family J166_04050 PF00092 von Willebrand factor type A domain J166_04050 PF07584 Aerotolerance regulator N-terminal J166_04054 PF17863 AAA lid domain J166_04054 PF07726 ATPase family associated with various cellular activities (AAA) J166_04056 PF11741 AMIN domain J166_04056 PF00263 Bacterial type II and III secretion system protein J166_04056 PF03958 Bacterial type II/III secretion system short domain J166_04056 PF07660 Secretin and TonB N terminus short domain J166_04061 PF00905 Penicillin binding protein transpeptidase domain J166_04061 PF00912 Transglycosylase J166_04061 PF17092 Penicillin-binding protein OB-like domain J166_04064 PF00285 Citrate synthase, C-terminal domain J166_04065 PF01197 Ribosomal protein L31 J166_04066 PF01156 Inosine-uridine preferring nucleoside hydrolase J166_04067 PF00270 DEAD/DEAH box helicase J166_04067 PF00271 Helicase conserved C-terminal domain J166_04067 PF17191 RecG wedge domain J166_04068 PF01042 Endoribonuclease L-PSP J166_04069 PF04607 Region found in RelA / SpoT proteins J166_04069 PF13291 ACT domain J166_04069 PF02824 TGS domain J166_04070 PF01192 RNA polymerase Rpb6 J166_04071 PF00625 Guanylate kinase J166_04072 PF03755 YicC-like family, N-terminal region J166_04072 PF08340 Domain of unknown function (DUF1732) J166_04073 PF03725 3' exoribonuclease family, domain 2 J166_04073 PF01138 3' exoribonuclease family, domain 1 J166_04075 PF01725 Ham1 family J166_04076 PF06969 HemN C-terminal domain J166_04076 PF04055 Radical SAM superfamily J166_04079 PF00557 Metallopeptidase family M24 J166_04081 PF00557 Metallopeptidase family M24 J166_04081 PF05195 Aminopeptidase P, N-terminal domain J166_04082 PF03695 Uncharacterised protein family (UPF0149) J166_04084 PF05164 Cell division protein ZapA J166_04086 PF01812 5-formyltetrahydrofolate cyclo-ligase family J166_04088 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J166_04090 PF13369 Transglutaminase-like superfamily J166_04091 PF00301 Rubredoxin J166_04092 PF02581 Thiamine monophosphate synthase J166_04095 PF00202 Aminotransferase class-III J166_04096 PF00196 Bacterial regulatory proteins, luxR family J166_04096 PF17874 MalT-like TPR region J166_04097 PF00127 Copper binding proteins, plastocyanin/azurin family J166_04098 PF00155 Aminotransferase class I and II J166_04100 PF00034 Cytochrome c J166_04100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J166_04101 PF01593 Flavin containing amine oxidoreductase J166_04104 PF00202 Aminotransferase class-III J166_04105 PF00027 Cyclic nucleotide-binding domain J166_04105 PF00520 Ion transport protein J166_04108 PF01569 PAP2 superfamily J166_04109 PF01062 Bestrophin, RFP-TM, chloride channel J166_04111 PF08245 Mur ligase middle domain J166_04111 PF01225 Mur ligase family, catalytic domain J166_04111 PF02875 Mur ligase family, glutamate ligase domain J166_04113 PF00365 Phosphofructokinase J166_04115 PF03030 Inorganic H+ pyrophosphatase J166_04117 PF00719 Inorganic pyrophosphatase J166_04119 PF00593 TonB dependent receptor J166_04119 PF07715 TonB-dependent Receptor Plug Domain J166_04120 PF12833 Helix-turn-helix domain J166_04121 PF18500 CadC C-terminal domain 1 J166_04121 PF00486 Transcriptional regulatory protein, C terminal J166_04122 PF01964 Radical SAM ThiC family J166_04122 PF13667 ThiC-associated domain J166_04124 PF00593 TonB dependent receptor J166_04124 PF07715 TonB-dependent Receptor Plug Domain J166_04125 PF00672 HAMP domain J166_04125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_04125 PF02203 Tar ligand binding domain homologue J166_04127 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J166_04127 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J166_04128 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J166_04128 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J166_04128 PF00205 Thiamine pyrophosphate enzyme, central domain J166_04130 PF00291 Pyridoxal-phosphate dependent enzyme J166_04131 PF00682 HMGL-like J166_04131 PF08502 LeuA allosteric (dimerisation) domain J166_04132 PF00180 Isocitrate/isopropylmalate dehydrogenase J166_04133 PF00694 Aconitase C-terminal domain J166_04134 PF00330 Aconitase family (aconitate hydratase) J166_04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04136 PF00990 Diguanylate cyclase, GGDEF domain J166_04136 PF17151 Periplasmic sensor domain J166_04139 PF02321 Outer membrane efflux protein J166_04140 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J166_04141 PF03279 Bacterial lipid A biosynthesis acyltransferase J166_04147 PF03949 Malic enzyme, NAD binding domain J166_04147 PF00390 Malic enzyme, N-terminal domain J166_04147 PF01515 Phosphate acetyl/butaryl transferase J166_04148 PF00375 Sodium:dicarboxylate symporter family J166_04150 PF02743 Cache domain J166_04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04150 PF00512 His Kinase A (phospho-acceptor) domain J166_04151 PF07690 Major Facilitator Superfamily J166_04153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04153 PF03466 LysR substrate binding domain J166_04154 PF00248 Aldo/keto reductase family J166_04158 PF00196 Bacterial regulatory proteins, luxR family J166_04158 PF00072 Response regulator receiver domain J166_04160 PF08521 Two-component sensor kinase N-terminal J166_04160 PF00512 His Kinase A (phospho-acceptor) domain J166_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04161 PF00486 Transcriptional regulatory protein, C terminal J166_04161 PF00072 Response regulator receiver domain J166_04163 PF03600 Citrate transporter J166_04165 PF00106 short chain dehydrogenase J166_04166 PF00356 Bacterial regulatory proteins, lacI family J166_04169 PF00128 Alpha amylase, catalytic domain J166_04172 PF03193 RsgA GTPase J166_04176 PF07715 TonB-dependent Receptor Plug Domain J166_04176 PF00593 TonB dependent receptor J166_04177 PF01522 Polysaccharide deacetylase J166_04178 PF00462 Glutaredoxin J166_04181 PF01527 Transposase J166_04186 PF02645 Uncharacterised protein, DegV family COG1307 J166_04187 PF01327 Polypeptide deformylase J166_04188 PF03960 ArsC family J166_04191 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J166_04192 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J166_04193 PF01270 Glycosyl hydrolases family 8 J166_04194 PF03170 Bacterial cellulose synthase subunit J166_04195 PF07238 PilZ domain J166_04195 PF00535 Glycosyl transferase family 2 J166_04195 PF03552 Cellulose synthase J166_04198 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J166_04198 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J166_04205 PF07715 TonB-dependent Receptor Plug Domain J166_04205 PF00593 TonB dependent receptor J166_04207 PF07702 UTRA domain J166_04207 PF00392 Bacterial regulatory proteins, gntR family J166_04209 PF03958 Bacterial type II/III secretion system short domain J166_04209 PF00263 Bacterial type II and III secretion system protein J166_04211 PF10741 Type II secretion system (T2SS), protein M subtype b J166_04212 PF05137 Fimbrial assembly protein (PilN) J166_04213 PF03934 Type II secretion system (T2SS), protein K J166_04215 PF07963 Prokaryotic N-terminal methylation motif J166_04216 PF12019 Type II transport protein GspH J166_04217 PF08334 Type II secretion system (T2SS), protein G J166_04218 PF00482 Type II secretion system (T2SS), protein F J166_04219 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J166_04219 PF00437 Type II/IV secretion system protein J166_04220 PF00082 Subtilase family J166_04220 PF04151 Bacterial pre-peptidase C-terminal domain J166_04221 PF13018 Extended Signal Peptide of Type V secretion system J166_04221 PF03895 YadA-like membrane anchor domain J166_04221 PF05658 Head domain of trimeric autotransporter adhesin J166_04221 PF05662 Coiled stalk of trimeric autotransporter adhesin J166_04222 PF00082 Subtilase family J166_04222 PF04151 Bacterial pre-peptidase C-terminal domain J166_04223 PF05658 Head domain of trimeric autotransporter adhesin J166_04223 PF03895 YadA-like membrane anchor domain J166_04223 PF13018 Extended Signal Peptide of Type V secretion system J166_04223 PF05662 Coiled stalk of trimeric autotransporter adhesin J166_04224 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J166_04224 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J166_04224 PF02769 AIR synthase related protein, C-terminal domain J166_04225 PF13098 Thioredoxin-like domain J166_04225 PF10411 Disulfide bond isomerase protein N-terminus J166_04226 PF02899 Phage integrase, N-terminal SAM-like domain J166_04226 PF00589 Phage integrase family J166_04229 PF03739 Lipopolysaccharide export system permease LptF/LptG J166_04231 PF02789 Cytosol aminopeptidase family, N-terminal domain J166_04231 PF00883 Cytosol aminopeptidase family, catalytic domain J166_04234 PF08264 Anticodon-binding domain of tRNA J166_04234 PF00133 tRNA synthetases class I (I, L, M and V) J166_04234 PF10458 Valyl tRNA synthetase tRNA binding arm J166_04235 PF07715 TonB-dependent Receptor Plug Domain J166_04235 PF00593 TonB dependent receptor J166_04236 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J166_04236 PF01464 Transglycosylase SLT domain J166_04237 PF00544 Pectate lyase J166_04240 PF01066 CDP-alcohol phosphatidyltransferase J166_04242 PF04073 Aminoacyl-tRNA editing domain J166_04242 PF03129 Anticodon binding domain J166_04242 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J166_04243 PF00816 H-NS histone family J166_04245 PF02405 Permease MlaE J166_04246 PF00005 ABC transporter J166_04247 PF02470 MlaD protein J166_04247 PF03886 ABC-type transport auxiliary lipoprotein component J166_04251 PF05045 Rhamnan synthesis protein F J166_04251 PF14307 Glycosyltransferase WbsX J166_04252 PF01144 Coenzyme A transferase J166_04253 PF01144 Coenzyme A transferase J166_04254 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J166_04254 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J166_04254 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J166_04254 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J166_04255 PF01050 Mannose-6-phosphate isomerase J166_04255 PF00483 Nucleotidyl transferase J166_04256 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J166_04256 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J166_04256 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J166_04257 PF04321 RmlD substrate binding domain J166_04258 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J166_04259 PF00483 Nucleotidyl transferase J166_04260 PF16363 GDP-mannose 4,6 dehydratase J166_04261 PF01012 Electron transfer flavoprotein domain J166_04262 PF01012 Electron transfer flavoprotein domain J166_04262 PF00766 Electron transfer flavoprotein FAD-binding domain J166_04264 PF01040 UbiA prenyltransferase family J166_04265 PF04030 D-arabinono-1,4-lactone oxidase J166_04265 PF01565 FAD binding domain J166_04266 PF00106 short chain dehydrogenase J166_04268 PF01370 NAD dependent epimerase/dehydratase family J166_04269 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_04269 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J166_04272 PF01209 ubiE/COQ5 methyltransferase family J166_04274 PF14307 Glycosyltransferase WbsX J166_04274 PF05045 Rhamnan synthesis protein F J166_04275 PF00535 Glycosyl transferase family 2 J166_04276 PF00132 Bacterial transferase hexapeptide (six repeats) J166_04277 PF00005 ABC transporter J166_04279 PF01053 Cys/Met metabolism PLP-dependent enzyme J166_04280 PF00571 CBS domain J166_04280 PF00291 Pyridoxal-phosphate dependent enzyme J166_04284 PF00437 Type II/IV secretion system protein J166_04285 PF14497 Glutathione S-transferase, C-terminal domain J166_04285 PF02798 Glutathione S-transferase, N-terminal domain J166_04287 PF00271 Helicase conserved C-terminal domain J166_04287 PF00270 DEAD/DEAH box helicase J166_04289 PF00593 TonB dependent receptor J166_04289 PF07715 TonB-dependent Receptor Plug Domain J166_04290 PF01242 6-pyruvoyl tetrahydropterin synthase J166_04293 PF13185 GAF domain J166_04295 PF00756 Putative esterase J166_04296 PF00593 TonB dependent receptor J166_04296 PF07715 TonB-dependent Receptor Plug Domain J166_04297 PF13419 Haloacid dehalogenase-like hydrolase J166_04298 PF00817 impB/mucB/samB family J166_04298 PF11799 impB/mucB/samB family C-terminal domain J166_04299 PF07977 FabA-like domain J166_04300 PF02801 Beta-ketoacyl synthase, C-terminal domain J166_04300 PF00109 Beta-ketoacyl synthase, N-terminal domain J166_04302 PF01432 Peptidase family M3 J166_04305 PF07732 Multicopper oxidase J166_04305 PF07731 Multicopper oxidase J166_04305 PF00394 Multicopper oxidase J166_04306 PF05275 Copper resistance protein B precursor (CopB) J166_04307 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J166_04312 PF01380 SIS domain J166_04313 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_04314 PF00005 ABC transporter J166_04314 PF02687 FtsX-like permease family J166_04314 PF12704 MacB-like periplasmic core domain J166_04315 PF02687 FtsX-like permease family J166_04315 PF12704 MacB-like periplasmic core domain J166_04316 PF12704 MacB-like periplasmic core domain J166_04316 PF02687 FtsX-like permease family J166_04318 PF02954 Bacterial regulatory protein, Fis family J166_04318 PF00072 Response regulator receiver domain J166_04318 PF00158 Sigma-54 interaction domain J166_04319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04319 PF00512 His Kinase A (phospho-acceptor) domain J166_04320 PF00132 Bacterial transferase hexapeptide (six repeats) J166_04320 PF14602 Hexapeptide repeat of succinyl-transferase J166_04320 PF12804 MobA-like NTP transferase domain J166_04324 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J166_04324 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J166_04325 PF02874 ATP synthase alpha/beta family, beta-barrel domain J166_04325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J166_04326 PF00231 ATP synthase J166_04327 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J166_04327 PF00306 ATP synthase alpha/beta chain, C terminal domain J166_04327 PF02874 ATP synthase alpha/beta family, beta-barrel domain J166_04328 PF00213 ATP synthase delta (OSCP) subunit J166_04329 PF00430 ATP synthase B/B' CF(0) J166_04330 PF00137 ATP synthase subunit C J166_04331 PF00119 ATP synthase A chain J166_04335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J166_04335 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_04337 PF00364 Biotin-requiring enzyme J166_04337 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J166_04337 PF02817 e3 binding domain J166_04343 PF03180 NLPA lipoprotein J166_04344 PF00528 Binding-protein-dependent transport system inner membrane component J166_04345 PF00005 ABC transporter J166_04345 PF09383 NIL domain J166_04346 PF00892 EamA-like transporter family J166_04347 PF04461 Protein of unknown function (DUF520) J166_04349 PF00989 PAS fold J166_04349 PF01627 Hpt domain J166_04349 PF18415 Histidine kinase receptor ArcB trans-membrane domain J166_04349 PF00512 His Kinase A (phospho-acceptor) domain J166_04349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04349 PF00072 Response regulator receiver domain J166_04354 PF13419 Haloacid dehalogenase-like hydrolase J166_04355 PF00849 RNA pseudouridylate synthase J166_04355 PF01479 S4 domain J166_04356 PF08468 Methyltransferase small domain N-terminal J166_04356 PF05175 Methyltransferase small domain J166_04358 PF07995 Glucose / Sorbosone dehydrogenase J166_04360 PF00989 PAS fold J166_04360 PF00512 His Kinase A (phospho-acceptor) domain J166_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04364 PF01168 Alanine racemase, N-terminal domain J166_04364 PF00842 Alanine racemase, C-terminal domain J166_04365 PF01266 FAD dependent oxidoreductase J166_04366 PF01037 Lrp/AsnC ligand binding domain J166_04368 PF01641 SelR domain J166_04370 PF01618 MotA/TolQ/ExbB proton channel family J166_04371 PF13677 Membrane MotB of proton-channel complex MotA/MotB J166_04371 PF00691 OmpA family J166_04376 PF01061 ABC-2 type transporter J166_04377 PF00005 ABC transporter J166_04378 PF00999 Sodium/hydrogen exchanger family J166_04379 PF02469 Fasciclin domain J166_04380 PF03167 Uracil DNA glycosylase superfamily J166_04382 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J166_04384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04384 PF03466 LysR substrate binding domain J166_04385 PF03358 NADPH-dependent FMN reductase J166_04386 PF00248 Aldo/keto reductase family J166_04388 PF01431 Peptidase family M13 J166_04388 PF05649 Peptidase family M13 J166_04392 PF13520 Amino acid permease J166_04394 PF04397 LytTr DNA-binding domain J166_04394 PF00072 Response regulator receiver domain J166_04395 PF02743 Cache domain J166_04395 PF00672 HAMP domain J166_04395 PF06580 Histidine kinase J166_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J166_04398 PF05974 Domain of unknown function (DUF892) J166_04399 PF05067 Manganese containing catalase J166_04402 PF01339 CheB methylesterase J166_04402 PF08448 PAS fold J166_04402 PF03705 CheR methyltransferase, all-alpha domain J166_04402 PF01739 CheR methyltransferase, SAM binding domain J166_04405 PF02954 Bacterial regulatory protein, Fis family J166_04405 PF00072 Response regulator receiver domain J166_04405 PF00158 Sigma-54 interaction domain J166_04407 PF01654 Cytochrome bd terminal oxidase subunit I J166_04408 PF02322 Cytochrome bd terminal oxidase subunit II J166_04412 PF16363 GDP-mannose 4,6 dehydratase J166_04414 PF03275 UDP-galactopyranose mutase J166_04416 PF00005 ABC transporter J166_04416 PF00664 ABC transporter transmembrane region J166_04419 PF00107 Zinc-binding dehydrogenase J166_04419 PF13823 Alcohol dehydrogenase GroES-associated J166_04419 PF08240 Alcohol dehydrogenase GroES-like domain J166_04428 PF07715 TonB-dependent Receptor Plug Domain J166_04428 PF00593 TonB dependent receptor J166_04431 PF00005 ABC transporter J166_04433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04433 PF03466 LysR substrate binding domain J166_04434 PF01042 Endoribonuclease L-PSP J166_04437 PF00672 HAMP domain J166_04437 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J166_04437 PF02203 Tar ligand binding domain homologue J166_04441 PF02525 Flavodoxin-like fold J166_04450 PF00557 Metallopeptidase family M24 J166_04453 PF01695 IstB-like ATP binding protein J166_04454 PF00665 Integrase core domain J166_04454 PF02796 Helix-turn-helix domain of resolvase J166_04455 PF01527 Transposase J166_04456 PF13276 HTH-like domain J166_04456 PF13333 Integrase core domain J166_04456 PF00665 Integrase core domain J166_04459 PF00717 Peptidase S24-like J166_04460 PF11798 IMS family HHH motif J166_04460 PF13438 Domain of unknown function (DUF4113) J166_04460 PF11799 impB/mucB/samB family C-terminal domain J166_04460 PF00817 impB/mucB/samB family J166_04464 PF01555 DNA methylase J166_04474 PF00182 Chitinase class I J166_04499 PF01695 IstB-like ATP binding protein J166_04500 PF02796 Helix-turn-helix domain of resolvase J166_04500 PF00665 Integrase core domain J166_04516 PF04539 Sigma-70 region 3 J166_04516 PF04546 Sigma-70, non-essential region J166_04516 PF03979 Sigma-70 factor, region 1.1 J166_04516 PF00140 Sigma-70 factor, region 1.2 J166_04516 PF04545 Sigma-70, region 4 J166_04516 PF04542 Sigma-70 region 2 J166_04517 PF02580 D-Tyr-tRNA(Tyr) deacylase J166_04518 PF03279 Bacterial lipid A biosynthesis acyltransferase J166_04520 PF00925 GTP cyclohydrolase II J166_04524 PF00535 Glycosyl transferase family 2 J166_04527 PF01189 16S rRNA methyltransferase RsmB/F J166_04527 PF01029 NusB family J166_04528 PF02911 Formyl transferase, C-terminal domain J166_04528 PF00551 Formyl transferase J166_04529 PF01327 Polypeptide deformylase J166_04530 PF01476 LysM domain J166_04531 PF17782 DprA winged helix domain J166_04531 PF02481 DNA recombination-mediator protein A J166_04532 PF04361 Protein of unknown function (DUF494) J166_04533 PF07963 Prokaryotic N-terminal methylation motif J166_04533 PF00114 Pilin (bacterial filament) J166_04535 PF13368 Topoisomerase C-terminal repeat J166_04535 PF01751 Toprim domain J166_04535 PF01131 DNA topoisomerase J166_04536 PF01300 Telomere recombination J166_04541 PF01343 Peptidase family S49 J166_04542 PF01554 MatE J166_04546 PF00270 DEAD/DEAH box helicase J166_04546 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J166_04546 PF00271 Helicase conserved C-terminal domain J166_04546 PF17764 3′ DNA-binding domain (3′BD) J166_04546 PF18074 Primosomal protein N C-terminal domain J166_04547 PF13417 Glutathione S-transferase, N-terminal domain J166_04547 PF00043 Glutathione S-transferase, C-terminal domain J166_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase J166_04551 PF03458 UPF0126 domain J166_04552 PF04545 Sigma-70, region 4 J166_04552 PF04542 Sigma-70 region 2 J166_04553 PF03167 Uracil DNA glycosylase superfamily J166_04554 PF00072 Response regulator receiver domain J166_04554 PF01339 CheB methylesterase J166_04555 PF18075 FtsX extracellular domain J166_04556 PF00005 ABC transporter J166_04557 PF00271 Helicase conserved C-terminal domain J166_04557 PF00270 DEAD/DEAH box helicase J166_04557 PF12300 ATP-dependent RNA helicase RhlB J166_04558 PF00085 Thioredoxin J166_04559 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J166_04559 PF07498 Rho termination factor, N-terminal domain J166_04559 PF07497 Rho termination factor, RNA-binding domain J166_04560 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J166_04561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04561 PF03466 LysR substrate binding domain J166_04563 PF03971 Monomeric isocitrate dehydrogenase J166_04566 PF09704 CRISPR-associated protein (Cas_Cas5) J166_04567 PF09704 CRISPR-associated protein (Cas_Cas5) J166_04571 PF01867 CRISPR associated protein Cas1 J166_04572 PF00665 Integrase core domain J166_04572 PF02796 Helix-turn-helix domain of resolvase J166_04573 PF01695 IstB-like ATP binding protein J166_04575 PF04972 BON domain J166_04575 PF01476 LysM domain J166_04576 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J166_04576 PF14489 QueF-like protein J166_04577 PF07687 Peptidase dimerisation domain J166_04577 PF01546 Peptidase family M20/M25/M40 J166_04578 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_04579 PF00873 AcrB/AcrD/AcrF family J166_04580 PF00873 AcrB/AcrD/AcrF family J166_04581 PF07063 Domain of unknown function (DUF1338) J166_04589 PF01427 D-ala-D-ala dipeptidase J166_04590 PF01510 N-acetylmuramoyl-L-alanine amidase J166_04592 PF13378 Enolase C-terminal domain-like J166_04592 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J166_04594 PF13520 Amino acid permease J166_04597 PF05360 yiaA/B two helix domain J166_04598 PF07995 Glucose / Sorbosone dehydrogenase J166_04599 PF01915 Glycosyl hydrolase family 3 C-terminal domain J166_04599 PF00933 Glycosyl hydrolase family 3 N terminal domain J166_04599 PF14310 Fibronectin type III-like domain J166_04600 PF02152 Dihydroneopterin aldolase J166_04601 PF00814 Glycoprotease family J166_04602 PF01165 Ribosomal protein S21 J166_04603 PF09424 Yqey-like protein J166_04604 PF03631 Virulence factor BrkB J166_04605 PF08278 DNA primase DnaG DnaB-binding J166_04605 PF08275 DNA primase catalytic core, N-terminal domain J166_04605 PF10410 DnaB-helicase binding domain of primase J166_04605 PF01807 CHC2 zinc finger J166_04606 PF13593 SBF-like CPA transporter family (DUF4137) J166_04608 PF01040 UbiA prenyltransferase family J166_04613 PF00510 Cytochrome c oxidase subunit III J166_04614 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J166_04616 PF00115 Cytochrome C and Quinol oxidase polypeptide I J166_04619 PF01619 Proline dehydrogenase J166_04619 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J166_04619 PF00171 Aldehyde dehydrogenase family J166_04619 PF14850 DNA-binding domain of Proline dehydrogenase J166_04627 PF03594 Benzoate membrane transport protein J166_04628 PF13426 PAS domain J166_04628 PF01590 GAF domain J166_04628 PF00360 Phytochrome region J166_04628 PF08446 PAS fold J166_04629 PF01126 Heme oxygenase J166_04630 PF07690 Major Facilitator Superfamily J166_04631 PF01263 Aldose 1-epimerase J166_04633 PF02810 SEC-C motif J166_04634 PF01925 Sulfite exporter TauE/SafE J166_04639 PF01227 GTP cyclohydrolase I J166_04641 PF07869 Protein of unknown function (DUF1656) J166_04642 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J166_04642 PF00529 HlyD membrane-fusion protein of T1SS J166_04643 PF02321 Outer membrane efflux protein J166_04644 PF04632 Fusaric acid resistance protein family J166_04645 PF00083 Sugar (and other) transporter J166_04646 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J166_04647 PF13091 PLD-like domain J166_04647 PF13396 Phospholipase_D-nuclease N-terminal J166_04652 PF01850 PIN domain J166_04657 PF00849 RNA pseudouridylate synthase J166_04659 PF01527 Transposase J166_04660 PF13276 HTH-like domain J166_04660 PF13333 Integrase core domain J166_04660 PF00665 Integrase core domain J166_04663 PF00289 Biotin carboxylase, N-terminal domain J166_04663 PF02785 Biotin carboxylase C-terminal domain J166_04663 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J166_04664 PF01425 Amidase J166_04671 PF13538 UvrD-like helicase C-terminal domain J166_04674 PF12705 PD-(D/E)XK nuclease superfamily J166_04674 PF13361 UvrD-like helicase C-terminal domain J166_04674 PF00580 UvrD/REP helicase N-terminal domain J166_04675 PF17946 RecC C-terminal domain J166_04677 PF00005 ABC transporter J166_04678 PF02405 Permease MlaE J166_04679 PF02470 MlaD protein J166_04680 PF05494 MlaC protein J166_04682 PF04333 MlaA lipoprotein J166_04684 PF00255 Glutathione peroxidase J166_04686 PF02646 RmuC family J166_04687 PF08240 Alcohol dehydrogenase GroES-like domain J166_04687 PF00107 Zinc-binding dehydrogenase J166_04688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J166_04688 PF03466 LysR substrate binding domain J166_04690 PF00043 Glutathione S-transferase, C-terminal domain J166_04690 PF13417 Glutathione S-transferase, N-terminal domain J166_04692 PF13520 Amino acid permease J166_04693 PF17678 Glycosyl hydrolase family 92 N-terminal domain J166_04693 PF07971 Glycosyl hydrolase family 92 J166_04694 PF10947 Protein of unknown function (DUF2628) J166_04695 PF00990 Diguanylate cyclase, GGDEF domain J166_04696 PF17853 GGDEF-like domain J166_04696 PF13556 PucR C-terminal helix-turn-helix domain J166_04696 PF05651 Putative sugar diacid recognition J166_04697 PF02595 Glycerate kinase family J166_04698 PF07690 Major Facilitator Superfamily J166_04701 PF10672 S-adenosylmethionine-dependent methyltransferase J166_04701 PF17785 PUA-like domain J166_04703 PF03741 Integral membrane protein TerC family J166_04704 PF01694 Rhomboid family J166_04705 PF03009 Glycerophosphoryl diester phosphodiesterase family J166_04707 PF01569 PAP2 superfamily J166_04708 PF01926 50S ribosome-binding GTPase J166_04708 PF12631 MnmE helical domain J166_04708 PF10396 GTP-binding protein TrmE N-terminus J166_04709 PF01522 Polysaccharide deacetylase J166_04710 PF14849 YidC periplasmic domain J166_04710 PF02096 60Kd inner membrane protein J166_04711 PF00825 Ribonuclease P J166_04712 PF00468 Ribosomal protein L34