J166_00005 SM00857 Resolvase, N terminal domain J166_00017 SM00857 Resolvase, N terminal domain J166_00029 SM00857 Resolvase, N terminal domain J166_00036 SM00857 Resolvase, N terminal domain J166_00038 SM00670 Large family of predicted nucleotide-binding domains J166_00045 SM00857 Resolvase, N terminal domain J166_00052 SM00470 ParB-like nuclease domain J166_00059 SM00382 ATPases associated with a variety of cellular activities J166_00082 SM00670 Large family of predicted nucleotide-binding domains J166_00084 SM00382 ATPases associated with a variety of cellular activities J166_00084 SM00760 Bacterial dnaA protein helix-turn-helix domain J166_00085 SM00480 DNA polymerase III beta subunit J166_00088 SM00387 Histidine kinase-like ATPases J166_00088 SM00433 TopoisomeraseII J166_00091 SM00028 Tetratricopeptide repeats J166_00098 SM00155 Phospholipase D. Active site motifs. J166_00101 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_00107 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_00107 SM00245 tail specific protease J166_00124 SM00633 Glycosyl hydrolase family 10 J166_00126 SM00633 Glycosyl hydrolase family 10 J166_00129 SM00633 Glycosyl hydrolase family 10 J166_00140 SM00612 J166_00140 J166_00144 SM00758 J166_00144 J166_00144 SM01217 J166_00144 J166_00146 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J166_00149 SM00354 helix_turn _helix lactose operon repressor J166_00163 SM00382 ATPases associated with a variety of cellular activities J166_00165 SM00836 DALR anticodon binding domain J166_00177 SM00564 beta-propeller repeat J166_00183 SM00091 PAS domain J166_00183 SM00387 Histidine kinase-like ATPases J166_00183 SM00388 His Kinase A (phosphoacceptor) domain J166_00183 SM00448 cheY-homologous receiver domain J166_00185 SM00346 helix_turn_helix isocitrate lyase regulation J166_00189 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J166_00199 SM00421 helix_turn_helix, Lux Regulon J166_00199 SM00448 cheY-homologous receiver domain J166_00228 SM00155 Phospholipase D. Active site motifs. J166_00231 SM01266 J166_00231 J166_00233 SM00342 helix_turn_helix, arabinose operon control protein J166_00241 SM00382 ATPases associated with a variety of cellular activities J166_00241 SM01086 C-terminal, D2-small domain, of ClpB protein J166_00247 SM00915 Jacalin-like lectin domain J166_00249 SM00965 Secretin and TonB N terminus short domain J166_00253 SM00220 Serine/Threonine protein kinases, catalytic domain J166_00255 SM00028 Tetratricopeptide repeats J166_00258 SM00240 Forkhead associated domain J166_00263 SM00331 Sigma factor PP2C-like phosphatases J166_00263 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J166_00267 SM00912 haemagglutination activity domain J166_00270 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J166_00270 SM00474 3'-5' exonuclease J166_00270 SM00475 5'-3' exonuclease J166_00270 SM00482 DNA polymerase A domain J166_00281 SM00563 Phosphate acyltransferases J166_00289 SM00822 J166_00289 J166_00294 SM00825 Beta-ketoacyl synthase J166_00296 SM00248 ankyrin repeats J166_00301 SM01057 Eukaryotic-type carbonic anhydrase J166_00302 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_00302 SM00924 MgtE intracellular N domain J166_00303 SM00881 CoA binding domain J166_00316 SM00382 ATPases associated with a variety of cellular activities J166_00318 SM00342 helix_turn_helix, arabinose operon control protein J166_00326 SM00530 Helix-turn-helix XRE-family like proteins J166_00328 SM00382 ATPases associated with a variety of cellular activities J166_00332 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J166_00340 SM01004 Delta-aminolevulinic acid dehydratase J166_00343 SM00477 DNA/RNA non-specific endonuclease J166_00343 SM00892 DNA/RNA non-specific endonuclease J166_00349 SM00491 J166_00349 J166_00350 SM01060 J166_00350 J166_00351 SM00248 ankyrin repeats J166_00355 SM00448 cheY-homologous receiver domain J166_00355 SM00862 Transcriptional regulatory protein, C terminal J166_00356 SM00387 Histidine kinase-like ATPases J166_00356 SM00388 His Kinase A (phosphoacceptor) domain J166_00369 SM00960 Roadblock/LC7 domain J166_00375 SM00849 Metallo-beta-lactamase superfamily J166_00383 SM00382 ATPases associated with a variety of cellular activities J166_00386 SM00421 helix_turn_helix, Lux Regulon J166_00386 SM00448 cheY-homologous receiver domain J166_00389 SM01060 J166_00389 J166_00398 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_00402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_00402 SM00387 Histidine kinase-like ATPases J166_00402 SM00388 His Kinase A (phosphoacceptor) domain J166_00403 SM00448 cheY-homologous receiver domain J166_00403 SM00862 Transcriptional regulatory protein, C terminal J166_00413 SM00244 prohibitin homologues J166_00421 SM00052 Putative diguanylate phosphodiesterase J166_00424 SM00382 ATPases associated with a variety of cellular activities J166_00426 SM00938 Nitrogen regulatory protein P-II J166_00433 SM00823 Phosphopantetheine attachment site J166_00433 SM00824 Thioesterase J166_00439 SM00836 DALR anticodon binding domain J166_00439 SM01016 Arginyl tRNA synthetase N terminal dom J166_00445 SM01259 J166_00445 J166_00449 SM00470 ParB-like nuclease domain J166_00458 SM00363 S4 RNA-binding domain J166_00465 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J166_00465 SM01232 J166_00465 J166_00468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_00468 SM00388 His Kinase A (phosphoacceptor) domain J166_00476 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J166_00480 SM00354 helix_turn _helix lactose operon repressor J166_00482 SM00563 Phosphate acyltransferases J166_00483 SM00829 Enoylreductase J166_00488 SM00382 ATPases associated with a variety of cellular activities J166_00490 SM00829 Enoylreductase J166_00517 SM00382 ATPases associated with a variety of cellular activities J166_00541 SM00487 DEAD-like helicases superfamily J166_00541 SM00490 helicase superfamily c-terminal domain J166_00545 SM00822 J166_00545 J166_00595 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J166_00599 SM00421 helix_turn_helix, Lux Regulon J166_00599 SM00448 cheY-homologous receiver domain J166_00603 SM00862 Transcriptional regulatory protein, C terminal J166_00620 SM00642 Alpha-amylase domain J166_00621 SM00642 Alpha-amylase domain J166_00622 SM00642 Alpha-amylase domain J166_00632 SM00354 helix_turn _helix lactose operon repressor J166_00641 SM00344 helix_turn_helix ASNC type J166_00645 SM00382 ATPases associated with a variety of cellular activities J166_00648 SM00382 ATPases associated with a variety of cellular activities J166_00654 SM00530 Helix-turn-helix XRE-family like proteins J166_00659 SM00855 Phosphoglycerate mutase family J166_00660 SM00867 YceI-like domain J166_00661 SM00155 Phospholipase D. Active site motifs. J166_00663 SM00563 Phosphate acyltransferases J166_00666 SM00028 Tetratricopeptide repeats J166_00671 SM01230 J166_00671 J166_00672 SM00938 Nitrogen regulatory protein P-II J166_00674 SM00387 Histidine kinase-like ATPases J166_00674 SM00388 His Kinase A (phosphoacceptor) domain J166_00675 SM00382 ATPases associated with a variety of cellular activities J166_00675 SM00448 cheY-homologous receiver domain J166_00687 SM00450 Rhodanese Homology Domain J166_00692 SM00387 Histidine kinase-like ATPases J166_00692 SM00388 His Kinase A (phosphoacceptor) domain J166_00693 SM00382 ATPases associated with a variety of cellular activities J166_00693 SM00448 cheY-homologous receiver domain J166_00716 SM00563 Phosphate acyltransferases J166_00722 SM00342 helix_turn_helix, arabinose operon control protein J166_00727 SM00100 Cyclic nucleotide-monophosphate binding domain J166_00727 SM00267 diguanylate cyclase J166_00732 SM00878 Biotin carboxylase C-terminal domain J166_00737 SM00953 J166_00737 J166_00745 SM00833 Cobalamin synthesis protein cobW C-terminal domain J166_00750 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_00756 SM00829 Enoylreductase J166_00763 SM00487 DEAD-like helicases superfamily J166_00763 SM00490 helicase superfamily c-terminal domain J166_00763 SM00847 Helicase associated domain (HA2) Add an annotation J166_00788 SM00422 helix_turn_helix, mercury resistance J166_00795 SM00448 cheY-homologous receiver domain J166_00795 SM00862 Transcriptional regulatory protein, C terminal J166_00796 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_00796 SM00387 Histidine kinase-like ATPases J166_00796 SM00388 His Kinase A (phosphoacceptor) domain J166_00822 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_00823 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_00827 SM00342 helix_turn_helix, arabinose operon control protein J166_00834 SM00420 helix_turn_helix, Deoxyribose operon repressor J166_00834 SM01134 J166_00834 J166_00837 SM00882 Coenzyme A transferase J166_00838 SM00882 Coenzyme A transferase J166_00842 SM00998 Adenylosuccinate lyase C-terminus J166_00846 SM00346 helix_turn_helix isocitrate lyase regulation J166_00847 SM00090 RIO-like kinase J166_00850 SM01228 J166_00850 J166_00861 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_00861 SM00876 Biotin and Thiamin Synthesis associated domain J166_00866 SM00369 Leucine-rich repeats, typical (most populated) subfamily J166_00886 SM00382 ATPases associated with a variety of cellular activities J166_00899 SM00267 diguanylate cyclase J166_00901 SM00642 Alpha-amylase domain J166_00902 SM00642 Alpha-amylase domain J166_00904 SM00642 Alpha-amylase domain J166_00906 SM00642 Alpha-amylase domain J166_00915 SM00822 J166_00915 J166_00917 SM00487 DEAD-like helicases superfamily J166_00917 SM00490 helicase superfamily c-terminal domain J166_00920 SM00326 Src homology 3 domains J166_00921 SM00861 Transketolase, pyrimidine binding domain J166_00923 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J166_00927 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_00947 SM00271 DnaJ molecular chaperone homology domain J166_00951 SM00046 Diacylglycerol kinase catalytic domain (presumed) J166_00955 SM00903 Flavin reductase like domain J166_00959 SM00100 Cyclic nucleotide-monophosphate binding domain J166_00959 SM00419 helix_turn_helix, cAMP Regulatory protein J166_00969 SM00387 Histidine kinase-like ATPases J166_00969 SM00388 His Kinase A (phosphoacceptor) domain J166_00969 SM00448 cheY-homologous receiver domain J166_00970 SM00052 Putative diguanylate phosphodiesterase J166_00970 SM00267 diguanylate cyclase J166_00970 SM00448 cheY-homologous receiver domain J166_00980 SM00563 Phosphate acyltransferases J166_00984 SM01209 J166_00984 J166_00984 SM01210 J166_00984 J166_00986 SM00798 AICARFT/IMPCHase bienzyme J166_00986 SM00851 MGS-like domain J166_00989 SM00195 Dual specificity phosphatase, catalytic domain J166_00993 SM00563 Phosphate acyltransferases J166_00998 SM00530 Helix-turn-helix XRE-family like proteins J166_01004 SM00878 Biotin carboxylase C-terminal domain J166_01010 SM00342 helix_turn_helix, arabinose operon control protein J166_01012 SM00234 in StAR and phosphatidylcholine transfer protein J166_01016 SM00883 Chaperonin 10 Kd subunit J166_01027 SM00944 Pro-kumamolisin, activation domain J166_01030 SM00867 YceI-like domain J166_01041 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J166_01043 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_01043 SM00895 J166_01043 J166_01047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_01047 SM00331 Sigma factor PP2C-like phosphatases J166_01055 SM00342 helix_turn_helix, arabinose operon control protein J166_01070 SM00967 RNA 2'-O ribose methyltransferase substrate binding J166_01076 SM00354 helix_turn _helix lactose operon repressor J166_01086 SM00869 Autotransporter beta-domain J166_01096 SM00530 Helix-turn-helix XRE-family like proteins J166_01117 SM00382 ATPases associated with a variety of cellular activities J166_01124 SM00318 Staphylococcal nuclease homologues J166_01126 SM00528 Domain in histone-like proteins of HNS family J166_01127 SM00642 Alpha-amylase domain J166_01131 SM00448 cheY-homologous receiver domain J166_01131 SM00862 Transcriptional regulatory protein, C terminal J166_01132 SM00387 Histidine kinase-like ATPases J166_01132 SM00388 His Kinase A (phosphoacceptor) domain J166_01146 SM00382 ATPases associated with a variety of cellular activities J166_01146 SM00448 cheY-homologous receiver domain J166_01147 SM00387 Histidine kinase-like ATPases J166_01147 SM00388 His Kinase A (phosphoacceptor) domain J166_01149 SM00881 CoA binding domain J166_01151 SM01126 J166_01151 J166_01203 SM00448 cheY-homologous receiver domain J166_01204 SM00387 Histidine kinase-like ATPases J166_01224 SM00387 Histidine kinase-like ATPases J166_01225 SM00091 PAS domain J166_01229 SM00382 ATPases associated with a variety of cellular activities J166_01229 SM00994 ClpX C4-type zinc finger J166_01229 SM01086 C-terminal, D2-small domain, of ClpB protein J166_01230 SM00382 ATPases associated with a variety of cellular activities J166_01230 SM00464 Found in ATP-dependent protease La (LON) J166_01231 SM00411 bacterial (prokaryotic) histone like domain J166_01237 SM00257 Lysin motif J166_01238 SM00849 Metallo-beta-lactamase superfamily J166_01241 SM00479 J166_01241 J166_01242 SM00331 Sigma factor PP2C-like phosphatases J166_01242 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J166_01247 SM00849 Metallo-beta-lactamase superfamily J166_01248 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_01261 SM00382 ATPases associated with a variety of cellular activities J166_01263 SM00493 J166_01263 J166_01266 SM00460 Transglutaminase/protease-like homologues J166_01268 SM00382 ATPases associated with a variety of cellular activities J166_01278 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J166_01279 SM00822 J166_01279 J166_01281 SM00825 Beta-ketoacyl synthase J166_01288 SM00382 ATPases associated with a variety of cellular activities J166_01297 SM01359 J166_01297 J166_01297 SM01360 J166_01297 J166_01304 SM00271 DnaJ molecular chaperone homology domain J166_01306 SM00448 cheY-homologous receiver domain J166_01308 SM00244 prohibitin homologues J166_01309 SM00244 prohibitin homologues J166_01310 SM01321 J166_01310 J166_01312 SM00788 Adenylosuccinate synthetase J166_01315 SM00822 J166_01315 J166_01325 SM00220 Serine/Threonine protein kinases, catalytic domain J166_01329 SM00855 Phosphoglycerate mutase family J166_01340 SM00052 Putative diguanylate phosphodiesterase J166_01341 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_01343 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J166_01344 SM01092 CO dehydrogenase flavoprotein C-terminal domain J166_01347 SM00974 J166_01347 J166_01351 SM00966 SpoVT / AbrB like domain J166_01355 SM00481 DNA polymerase alpha chain like domain J166_01357 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_01364 SM00091 PAS domain J166_01364 SM00342 helix_turn_helix, arabinose operon control protein J166_01369 SM00487 DEAD-like helicases superfamily J166_01369 SM00490 helicase superfamily c-terminal domain J166_01369 SM00982 J166_01369 J166_01369 SM01058 CarD-like/TRCF domain J166_01372 SM00448 cheY-homologous receiver domain J166_01372 SM00862 Transcriptional regulatory protein, C terminal J166_01373 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_01373 SM00387 Histidine kinase-like ATPases J166_01373 SM00388 His Kinase A (phosphoacceptor) domain J166_01374 SM00645 Papain family cysteine protease J166_01388 SM00342 helix_turn_helix, arabinose operon control protein J166_01401 SM00829 Enoylreductase J166_01405 SM00342 helix_turn_helix, arabinose operon control protein J166_01405 SM00478 endonuclease III J166_01405 SM01009 AlkA N-terminal domain J166_01414 SM00487 DEAD-like helicases superfamily J166_01414 SM00490 helicase superfamily c-terminal domain J166_01415 SM00052 Putative diguanylate phosphodiesterase J166_01415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_01415 SM00091 PAS domain J166_01415 SM00267 diguanylate cyclase J166_01416 SM00363 S4 RNA-binding domain J166_01417 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_01417 SM00267 diguanylate cyclase J166_01423 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_01423 SM00387 Histidine kinase-like ATPases J166_01423 SM00388 His Kinase A (phosphoacceptor) domain J166_01424 SM00448 cheY-homologous receiver domain J166_01424 SM00862 Transcriptional regulatory protein, C terminal J166_01431 SM00382 ATPases associated with a variety of cellular activities J166_01458 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01465 SM01351 J166_01465 J166_01468 SM00977 TilS substrate C-terminal domain J166_01469 SM00098 Alkaline phosphatase homologues J166_01480 SM01160 J166_01480 J166_01493 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_01499 SM00257 Lysin motif J166_01505 SM00859 Semialdehyde dehydrogenase, NAD binding domain J166_01519 SM00052 Putative diguanylate phosphodiesterase J166_01519 SM00267 diguanylate cyclase J166_01519 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_01522 SM00822 J166_01522 J166_01531 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J166_01532 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J166_01542 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01542 SM00322 K homology RNA-binding domain J166_01546 SM01387 J166_01546 J166_01547 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01547 SM00322 K homology RNA-binding domain J166_01551 SM01001 AIR carboxylase J166_01574 SM00530 Helix-turn-helix XRE-family like proteins J166_01581 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_01582 SM00421 helix_turn_helix, Lux Regulon J166_01582 SM00448 cheY-homologous receiver domain J166_01583 SM00387 Histidine kinase-like ATPases J166_01584 SM00342 helix_turn_helix, arabinose operon control protein J166_01593 SM01012 J166_01593 J166_01598 SM00052 Putative diguanylate phosphodiesterase J166_01599 SM00869 Autotransporter beta-domain J166_01600 SM00421 helix_turn_helix, Lux Regulon J166_01600 SM00448 cheY-homologous receiver domain J166_01601 SM00387 Histidine kinase-like ATPases J166_01601 SM00388 His Kinase A (phosphoacceptor) domain J166_01605 SM00869 Autotransporter beta-domain J166_01608 SM00448 cheY-homologous receiver domain J166_01608 SM00850 LytTr DNA-binding domain J166_01641 SM01034 Sensors of blue-light using FAD J166_01649 SM00363 S4 RNA-binding domain J166_01650 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01651 SM00421 helix_turn_helix, Lux Regulon J166_01651 SM00448 cheY-homologous receiver domain J166_01652 SM00450 Rhodanese Homology Domain J166_01656 SM00984 UDP binding domain J166_01663 SM00823 Phosphopantetheine attachment site J166_01674 SM00382 ATPases associated with a variety of cellular activities J166_01677 SM00155 Phospholipase D. Active site motifs. J166_01679 SM00490 helicase superfamily c-terminal domain J166_01681 SM00490 helicase superfamily c-terminal domain J166_01682 SM00382 ATPases associated with a variety of cellular activities J166_01684 SM00487 DEAD-like helicases superfamily J166_01687 SM00382 ATPases associated with a variety of cellular activities J166_01698 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J166_01698 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J166_01698 SM00493 J166_01698 J166_01720 SM00487 DEAD-like helicases superfamily J166_01747 SM00953 J166_01747 J166_01763 SM00530 Helix-turn-helix XRE-family like proteins J166_01766 SM00382 ATPases associated with a variety of cellular activities J166_01771 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J166_01771 SM00465 GIY-YIG type nucleases (URI domain) J166_01773 SM00226 Low molecular weight phosphatase family J166_01776 SM00382 ATPases associated with a variety of cellular activities J166_01779 SM00849 Metallo-beta-lactamase superfamily J166_01781 SM00382 ATPases associated with a variety of cellular activities J166_01792 SM00382 ATPases associated with a variety of cellular activities J166_01809 SM00448 cheY-homologous receiver domain J166_01810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_01810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_01810 SM00091 PAS domain J166_01810 SM00387 Histidine kinase-like ATPases J166_01810 SM00388 His Kinase A (phosphoacceptor) domain J166_01810 SM00448 cheY-homologous receiver domain J166_01811 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01811 SM00732 Likely ribonuclease with RNase H fold. J166_01825 SM00479 J166_01825 J166_01827 SM00529 Helix-turn-helix diphteria tox regulatory element J166_01832 SM00852 Probable molybdopterin binding domain J166_01841 SM00450 Rhodanese Homology Domain J166_01842 SM00852 Probable molybdopterin binding domain J166_01843 SM00382 ATPases associated with a variety of cellular activities J166_01844 SM00564 beta-propeller repeat J166_01847 SM00028 Tetratricopeptide repeats J166_01849 SM00562 J166_01849 J166_01856 SM00382 ATPases associated with a variety of cellular activities J166_01860 SM00382 ATPases associated with a variety of cellular activities J166_01860 SM00843 J166_01860 J166_01864 SM00316 Ribosomal protein S1-like RNA-binding domain J166_01865 SM00382 ATPases associated with a variety of cellular activities J166_01865 SM01086 C-terminal, D2-small domain, of ClpB protein J166_01870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_01872 SM00052 Putative diguanylate phosphodiesterase J166_01872 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_01872 SM00091 PAS domain J166_01872 SM00267 diguanylate cyclase J166_01873 SM00091 PAS domain J166_01873 SM00387 Histidine kinase-like ATPases J166_01874 SM00052 Putative diguanylate phosphodiesterase J166_01874 SM00267 diguanylate cyclase J166_01874 SM00448 cheY-homologous receiver domain J166_01875 SM00387 Histidine kinase-like ATPases J166_01878 SM00858 J166_01878 J166_01879 SM00260 Two component signalling adaptor domain J166_01879 SM00448 cheY-homologous receiver domain J166_01888 SM00047 Lysozyme subfamily 2 J166_01896 SM00421 helix_turn_helix, Lux Regulon J166_01896 SM00448 cheY-homologous receiver domain J166_01898 SM00448 cheY-homologous receiver domain J166_01899 SM00382 ATPases associated with a variety of cellular activities J166_01904 SM00822 J166_01904 J166_01915 SM00382 ATPases associated with a variety of cellular activities J166_01927 SM00267 diguanylate cyclase J166_01928 SM00267 diguanylate cyclase J166_01929 SM00052 Putative diguanylate phosphodiesterase J166_01929 SM00267 diguanylate cyclase J166_01932 SM00382 ATPases associated with a variety of cellular activities J166_01932 SM00962 SRP54-type protein, GTPase domain J166_01935 SM00448 cheY-homologous receiver domain J166_01937 SM00073 Histidine Phosphotransfer domain J166_01937 SM00260 Two component signalling adaptor domain J166_01937 SM00387 Histidine kinase-like ATPases J166_01937 SM01231 J166_01937 J166_01941 SM00530 Helix-turn-helix XRE-family like proteins J166_01948 SM00382 ATPases associated with a variety of cellular activities J166_01983 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_01983 SM01240 J166_01983 J166_01988 SM00822 J166_01988 J166_01990 SM00028 Tetratricopeptide repeats J166_01992 SM00411 bacterial (prokaryotic) histone like domain J166_01993 SM00316 Ribosomal protein S1-like RNA-binding domain J166_02009 SM00354 helix_turn _helix lactose operon repressor J166_02014 SM00363 S4 RNA-binding domain J166_02019 SM00382 ATPases associated with a variety of cellular activities J166_02029 SM00357 Cold shock protein domain J166_02030 SM00382 ATPases associated with a variety of cellular activities J166_02031 SM00382 ATPases associated with a variety of cellular activities J166_02037 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J166_02039 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J166_02042 SM00859 Semialdehyde dehydrogenase, NAD binding domain J166_02050 SM00840 J166_02050 J166_02054 SM01234 J166_02054 J166_02062 SM00849 Metallo-beta-lactamase superfamily J166_02067 SM00656 J166_02067 J166_02075 SM00841 Elongation factor P, C-terminal J166_02075 SM01185 J166_02075 J166_02077 SM00052 Putative diguanylate phosphodiesterase J166_02077 SM00267 diguanylate cyclase J166_02077 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02084 SM00382 ATPases associated with a variety of cellular activities J166_02085 SM00487 DEAD-like helicases superfamily J166_02085 SM00490 helicase superfamily c-terminal domain J166_02090 SM00357 Cold shock protein domain J166_02091 SM01322 J166_02091 J166_02093 SM00052 Putative diguanylate phosphodiesterase J166_02093 SM00267 diguanylate cyclase J166_02096 SM00822 J166_02096 J166_02100 SM00853 MutL C terminal dimerisation domain J166_02100 SM01340 J166_02100 J166_02101 SM00646 J166_02101 J166_02108 SM00474 3'-5' exonuclease J166_02112 SM00528 Domain in histone-like proteins of HNS family J166_02130 SM00857 Resolvase, N terminal domain J166_02145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_02145 SM00267 diguanylate cyclase J166_02146 SM00260 Two component signalling adaptor domain J166_02147 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02147 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02149 SM00487 DEAD-like helicases superfamily J166_02149 SM00490 helicase superfamily c-terminal domain J166_02160 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_02165 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_02165 SM01091 Transporter associated domain J166_02171 SM00382 ATPases associated with a variety of cellular activities J166_02177 SM01230 J166_02177 J166_02179 SM01230 J166_02179 J166_02181 SM00267 diguanylate cyclase J166_02181 SM00448 cheY-homologous receiver domain J166_02191 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_02191 SM00091 PAS domain J166_02191 SM00387 Histidine kinase-like ATPases J166_02191 SM00388 His Kinase A (phosphoacceptor) domain J166_02191 SM00448 cheY-homologous receiver domain J166_02191 SM01079 J166_02191 J166_02192 SM00448 cheY-homologous receiver domain J166_02192 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_02198 SM00354 helix_turn _helix lactose operon repressor J166_02211 SM01323 J166_02211 J166_02214 SM00344 helix_turn_helix ASNC type J166_02229 SM00387 Histidine kinase-like ATPases J166_02239 SM00944 Pro-kumamolisin, activation domain J166_02250 SM01130 J166_02250 J166_02255 SM00342 helix_turn_helix, arabinose operon control protein J166_02256 SM00382 ATPases associated with a variety of cellular activities J166_02256 SM00962 SRP54-type protein, GTPase domain J166_02256 SM00963 SRP54-type protein, helical bundle domain J166_02257 SM00478 endonuclease III J166_02259 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_02259 SM00091 PAS domain J166_02259 SM00387 Histidine kinase-like ATPases J166_02259 SM00388 His Kinase A (phosphoacceptor) domain J166_02259 SM00448 cheY-homologous receiver domain J166_02262 SM00465 GIY-YIG type nucleases (URI domain) J166_02268 SM00507 HNH nucleases J166_02269 SM00861 Transketolase, pyrimidine binding domain J166_02274 SM00849 Metallo-beta-lactamase superfamily J166_02291 SM00422 helix_turn_helix, mercury resistance J166_02292 SM00411 bacterial (prokaryotic) histone like domain J166_02293 SM00873 B3/4 domain J166_02293 SM00874 tRNA synthetase B5 domain J166_02293 SM00896 Ferredoxin-fold anticodon binding domain J166_02299 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J166_02300 SM00354 helix_turn _helix lactose operon repressor J166_02301 SM00642 Alpha-amylase domain J166_02308 SM00642 Alpha-amylase domain J166_02317 SM00758 J166_02317 J166_02326 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J166_02331 SM01130 J166_02331 J166_02335 SM00670 Large family of predicted nucleotide-binding domains J166_02345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_02345 SM00091 PAS domain J166_02345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02348 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J166_02350 SM00382 ATPases associated with a variety of cellular activities J166_02358 SM00382 ATPases associated with a variety of cellular activities J166_02360 SM01103 J166_02360 J166_02363 SM00257 Lysin motif J166_02367 SM00463 Small MutS-related domain J166_02372 SM01192 J166_02372 J166_02372 SM01193 J166_02372 J166_02377 SM00387 Histidine kinase-like ATPases J166_02377 SM00433 TopoisomeraseII J166_02382 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_02382 SM01091 Transporter associated domain J166_02387 SM00382 ATPases associated with a variety of cellular activities J166_02389 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_02420 SM00091 PAS domain J166_02420 SM00387 Histidine kinase-like ATPases J166_02420 SM00388 His Kinase A (phosphoacceptor) domain J166_02420 SM00448 cheY-homologous receiver domain J166_02421 SM00382 ATPases associated with a variety of cellular activities J166_02422 SM00448 cheY-homologous receiver domain J166_02423 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_02423 SM00091 PAS domain J166_02423 SM00387 Histidine kinase-like ATPases J166_02423 SM00388 His Kinase A (phosphoacceptor) domain J166_02423 SM00448 cheY-homologous receiver domain J166_02424 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_02426 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02426 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02433 SM00530 Helix-turn-helix XRE-family like proteins J166_02447 SM00966 SpoVT / AbrB like domain J166_02452 SM00965 Secretin and TonB N terminus short domain J166_02456 SM00736 Dystroglycan-type cadherin-like domains. J166_02460 SM00382 ATPases associated with a variety of cellular activities J166_02471 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J166_02471 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J166_02471 SM00493 J166_02471 J166_02497 SM00220 Serine/Threonine protein kinases, catalytic domain J166_02503 SM00260 Two component signalling adaptor domain J166_02505 SM00448 cheY-homologous receiver domain J166_02506 SM00073 Histidine Phosphotransfer domain J166_02506 SM00260 Two component signalling adaptor domain J166_02506 SM00387 Histidine kinase-like ATPases J166_02506 SM01231 J166_02506 J166_02507 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02509 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02509 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02509 SM01049 J166_02509 J166_02510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02512 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02513 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02513 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02514 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02514 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02516 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02516 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02517 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02517 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02518 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02518 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02519 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02519 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02522 SM00260 Two component signalling adaptor domain J166_02524 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_02524 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_02525 SM00138 Methyltransferase, chemotaxis proteins J166_02527 SM00448 cheY-homologous receiver domain J166_02528 SM00052 Putative diguanylate phosphodiesterase J166_02528 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_02528 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_02528 SM00091 PAS domain J166_02528 SM00267 diguanylate cyclase J166_02532 SM00966 SpoVT / AbrB like domain J166_02537 SM00073 Histidine Phosphotransfer domain J166_02537 SM00387 Histidine kinase-like ATPases J166_02537 SM00388 His Kinase A (phosphoacceptor) domain J166_02537 SM00448 cheY-homologous receiver domain J166_02538 SM00448 cheY-homologous receiver domain J166_02538 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_02540 SM00937 J166_02540 J166_02541 SM00850 LytTr DNA-binding domain J166_02552 SM00851 MGS-like domain J166_02552 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J166_02554 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J166_02561 SM00899 J166_02561 J166_02565 SM00822 J166_02565 J166_02566 SM00841 Elongation factor P, C-terminal J166_02566 SM01185 J166_02566 J166_02575 SM01007 Class II Aldolase and Adducin N-terminal domain J166_02590 SM00100 Cyclic nucleotide-monophosphate binding domain J166_02590 SM00419 helix_turn_helix, cAMP Regulatory protein J166_02600 SM00912 haemagglutination activity domain J166_02615 SM00014 Acid phosphatase homologues J166_02617 SM00387 Histidine kinase-like ATPases J166_02618 SM00448 cheY-homologous receiver domain J166_02620 SM00052 Putative diguanylate phosphodiesterase J166_02620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_02620 SM00267 diguanylate cyclase J166_02636 SM00646 J166_02636 J166_02638 SM00642 Alpha-amylase domain J166_02649 SM00382 ATPases associated with a variety of cellular activities J166_02661 SM00487 DEAD-like helicases superfamily J166_02661 SM00490 helicase superfamily c-terminal domain J166_02683 SM00830 Chorismate mutase type II J166_02687 SM00240 Forkhead associated domain J166_02692 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_02692 SM00866 J166_02692 J166_02699 SM00434 DNA Topoisomerase IV J166_02703 SM00292 breast cancer carboxy-terminal domain J166_02703 SM00532 Ligase N family J166_02706 SM00771 ZipA, C-terminal domain (FtsZ-binding) J166_02707 SM00968 SMC proteins Flexible Hinge Domain J166_02719 SM00421 helix_turn_helix, Lux Regulon J166_02719 SM00448 cheY-homologous receiver domain J166_02728 SM00947 Carbonic anhydrase J166_02733 SM00479 J166_02733 J166_02738 SM00981 J166_02738 J166_02739 SM00382 ATPases associated with a variety of cellular activities J166_02743 SM00644 J166_02743 J166_02745 SM00450 Rhodanese Homology Domain J166_02750 SM00478 endonuclease III J166_02752 SM00947 Carbonic anhydrase J166_02759 SM00382 ATPases associated with a variety of cellular activities J166_02762 SM00479 J166_02762 J166_02763 SM00267 diguanylate cyclase J166_02764 SM00967 RNA 2'-O ribose methyltransferase substrate binding J166_02766 SM00316 Ribosomal protein S1-like RNA-binding domain J166_02766 SM00357 Cold shock protein domain J166_02766 SM00955 J166_02766 J166_02770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J166_02772 SM01018 B12 binding domain J166_02776 SM00354 helix_turn _helix lactose operon repressor J166_02780 SM00984 UDP binding domain J166_02784 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_02785 SM00382 ATPases associated with a variety of cellular activities J166_02791 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_02791 SM01091 Transporter associated domain J166_02795 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J166_02797 SM00861 Transketolase, pyrimidine binding domain J166_02802 SM00382 ATPases associated with a variety of cellular activities J166_02811 SM00271 DnaJ molecular chaperone homology domain J166_02849 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_02849 SM00267 diguanylate cyclase J166_02851 SM00267 diguanylate cyclase J166_02874 SM00357 Cold shock protein domain J166_02877 SM00947 Carbonic anhydrase J166_02880 SM00382 ATPases associated with a variety of cellular activities J166_02884 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_02890 SM00631 J166_02890 J166_02891 SM01217 J166_02891 J166_02896 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_02897 SM00342 helix_turn_helix, arabinose operon control protein J166_02898 SM00434 DNA Topoisomerase IV J166_02904 SM00710 Parallel beta-helix repeats J166_02904 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J166_02905 SM01172 J166_02905 J166_02909 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_02911 SM00972 Spore Coat Protein U domain J166_02914 SM00972 Spore Coat Protein U domain J166_02919 SM00267 diguanylate cyclase J166_02925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_02933 SM00481 DNA polymerase alpha chain like domain J166_02950 SM00382 ATPases associated with a variety of cellular activities J166_02989 SM00671 Sel1-like repeats. J166_02989 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J166_02990 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J166_02991 SM00869 Autotransporter beta-domain J166_02995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_02995 SM00267 diguanylate cyclase J166_03001 SM00487 DEAD-like helicases superfamily J166_03001 SM00490 helicase superfamily c-terminal domain J166_03004 SM00357 Cold shock protein domain J166_03011 SM01118 J166_03011 J166_03013 SM00448 cheY-homologous receiver domain J166_03016 SM00358 Double-stranded RNA binding motif J166_03016 SM00535 Ribonuclease III family J166_03019 SM00838 Elongation factor G C-terminus J166_03020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_03030 SM00530 Helix-turn-helix XRE-family like proteins J166_03035 SM00812 Alpha-L-fucosidase J166_03040 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J166_03040 SM00534 ATPase domain of DNA mismatch repair MUTS family J166_03053 SM00382 ATPases associated with a variety of cellular activities J166_03053 SM00962 SRP54-type protein, GTPase domain J166_03053 SM00963 SRP54-type protein, helical bundle domain J166_03056 SM00813 Alpha-L-arabinofuranosidase C-terminus J166_03058 SM00448 cheY-homologous receiver domain J166_03059 SM00091 PAS domain J166_03059 SM00387 Histidine kinase-like ATPases J166_03059 SM00388 His Kinase A (phosphoacceptor) domain J166_03060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_03060 SM00387 Histidine kinase-like ATPases J166_03060 SM00388 His Kinase A (phosphoacceptor) domain J166_03060 SM00448 cheY-homologous receiver domain J166_03061 SM00138 Methyltransferase, chemotaxis proteins J166_03063 SM00387 Histidine kinase-like ATPases J166_03063 SM00388 His Kinase A (phosphoacceptor) domain J166_03063 SM00448 cheY-homologous receiver domain J166_03068 SM00387 Histidine kinase-like ATPases J166_03068 SM00388 His Kinase A (phosphoacceptor) domain J166_03068 SM00448 cheY-homologous receiver domain J166_03069 SM00387 Histidine kinase-like ATPases J166_03069 SM00388 His Kinase A (phosphoacceptor) domain J166_03076 SM00342 helix_turn_helix, arabinose operon control protein J166_03077 SM00862 Transcriptional regulatory protein, C terminal J166_03079 SM00382 ATPases associated with a variety of cellular activities J166_03080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_03089 SM00904 Riboflavin kinase J166_03107 SM00244 prohibitin homologues J166_03111 SM00478 endonuclease III J166_03114 SM00421 helix_turn_helix, Lux Regulon J166_03114 SM00448 cheY-homologous receiver domain J166_03121 SM00387 Histidine kinase-like ATPases J166_03121 SM00388 His Kinase A (phosphoacceptor) domain J166_03122 SM00448 cheY-homologous receiver domain J166_03122 SM00862 Transcriptional regulatory protein, C terminal J166_03134 SM01060 J166_03134 J166_03142 SM00073 Histidine Phosphotransfer domain J166_03142 SM00260 Two component signalling adaptor domain J166_03142 SM00387 Histidine kinase-like ATPases J166_03142 SM01231 J166_03142 J166_03143 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_03143 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_03144 SM00260 Two component signalling adaptor domain J166_03145 SM00052 Putative diguanylate phosphodiesterase J166_03145 SM00448 cheY-homologous receiver domain J166_03146 SM00138 Methyltransferase, chemotaxis proteins J166_03147 SM00448 cheY-homologous receiver domain J166_03148 SM00155 Phospholipase D. Active site motifs. J166_03151 SM00855 Phosphoglycerate mutase family J166_03161 SM00248 ankyrin repeats J166_03168 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J166_03169 SM01092 CO dehydrogenase flavoprotein C-terminal domain J166_03171 SM00829 Enoylreductase J166_03172 SM00267 diguanylate cyclase J166_03185 SM00732 Likely ribonuclease with RNase H fold. J166_03192 SM00382 ATPases associated with a variety of cellular activities J166_03195 SM00411 bacterial (prokaryotic) histone like domain J166_03201 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J166_03204 SM00382 ATPases associated with a variety of cellular activities J166_03210 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J166_03211 SM00671 Sel1-like repeats. J166_03217 SM00054 EF-hand, calcium binding motif J166_03235 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_03239 SM00382 ATPases associated with a variety of cellular activities J166_03248 SM00924 MgtE intracellular N domain J166_03254 SM00656 J166_03254 J166_03256 SM00421 helix_turn_helix, Lux Regulon J166_03262 SM00849 Metallo-beta-lactamase superfamily J166_03264 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J166_03268 SM00422 helix_turn_helix, mercury resistance J166_03295 SM00342 helix_turn_helix, arabinose operon control protein J166_03297 SM00387 Histidine kinase-like ATPases J166_03297 SM00388 His Kinase A (phosphoacceptor) domain J166_03297 SM00448 cheY-homologous receiver domain J166_03298 SM00387 Histidine kinase-like ATPases J166_03298 SM00388 His Kinase A (phosphoacceptor) domain J166_03298 SM00448 cheY-homologous receiver domain J166_03300 SM00387 Histidine kinase-like ATPases J166_03300 SM00388 His Kinase A (phosphoacceptor) domain J166_03300 SM00448 cheY-homologous receiver domain J166_03301 SM00867 YceI-like domain J166_03303 SM00867 YceI-like domain J166_03315 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_03321 SM00028 Tetratricopeptide repeats J166_03341 SM00812 Alpha-L-fucosidase J166_03342 SM00636 J166_03342 J166_03345 SM00758 J166_03345 J166_03345 SM01217 J166_03345 J166_03351 SM01149 J166_03351 J166_03362 SM00260 Two component signalling adaptor domain J166_03364 SM00073 Histidine Phosphotransfer domain J166_03364 SM00260 Two component signalling adaptor domain J166_03364 SM00387 Histidine kinase-like ATPases J166_03364 SM00448 cheY-homologous receiver domain J166_03364 SM01231 J166_03364 J166_03365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_03366 SM00260 Two component signalling adaptor domain J166_03367 SM00448 cheY-homologous receiver domain J166_03368 SM00448 cheY-homologous receiver domain J166_03373 SM00491 J166_03373 J166_03378 SM00954 Region found in RelA / SpoT proteins J166_03387 SM00382 ATPases associated with a variety of cellular activities J166_03387 SM00487 DEAD-like helicases superfamily J166_03387 SM00490 helicase superfamily c-terminal domain J166_03387 SM00847 Helicase associated domain (HA2) Add an annotation J166_03389 SM00341 Helicase and RNase D C-terminal J166_03389 SM00487 DEAD-like helicases superfamily J166_03389 SM00490 helicase superfamily c-terminal domain J166_03389 SM00956 J166_03389 J166_03391 SM00448 cheY-homologous receiver domain J166_03396 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_03396 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_03399 SM00448 cheY-homologous receiver domain J166_03400 SM00091 PAS domain J166_03400 SM00911 HWE histidine kinase J166_03411 SM00382 ATPases associated with a variety of cellular activities J166_03414 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J166_03421 SM00834 Putative regulatory protein J166_03430 SM00382 ATPases associated with a variety of cellular activities J166_03450 SM00855 Phosphoglycerate mutase family J166_03462 SM00382 ATPases associated with a variety of cellular activities J166_03462 SM01086 C-terminal, D2-small domain, of ClpB protein J166_03463 SM00382 ATPases associated with a variety of cellular activities J166_03465 SM00062 Bacterial periplasmic substrate-binding proteins J166_03480 SM00564 beta-propeller repeat J166_03481 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_03502 SM00382 ATPases associated with a variety of cellular activities J166_03515 SM01329 J166_03515 J166_03519 SM00448 cheY-homologous receiver domain J166_03519 SM00862 Transcriptional regulatory protein, C terminal J166_03520 SM00387 Histidine kinase-like ATPases J166_03520 SM00388 His Kinase A (phosphoacceptor) domain J166_03524 SM00014 Acid phosphatase homologues J166_03536 SM00855 Phosphoglycerate mutase family J166_03541 SM00829 Enoylreductase J166_03543 SM00382 ATPases associated with a variety of cellular activities J166_03552 SM00829 Enoylreductase J166_03559 SM00838 Elongation factor G C-terminus J166_03567 SM00662 RNA polymerases D J166_03568 SM00363 S4 RNA-binding domain J166_03568 SM01390 J166_03568 J166_03580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J166_03581 SM01374 J166_03581 J166_03585 SM00322 K homology RNA-binding domain J166_03588 SM01382 J166_03588 J166_03588 SM01383 J166_03588 J166_03592 SM01403 J166_03592 J166_03594 SM00838 Elongation factor G C-terminus J166_03594 SM00889 Elongation factor G, domain IV J166_03597 SM00663 RNA polymerase I subunit A N-terminus J166_03603 SM00649 Ribosomal protein L11/L12 J166_03604 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J166_03604 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J166_03614 SM01400 J166_03614 J166_03618 SM00028 Tetratricopeptide repeats J166_03620 SM00937 J166_03620 J166_03621 SM00028 Tetratricopeptide repeats J166_03622 SM00852 Probable molybdopterin binding domain J166_03645 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J166_03645 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J166_03651 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J166_03651 SM00475 5'-3' exonuclease J166_03664 SM00421 helix_turn_helix, Lux Regulon J166_03665 SM00387 Histidine kinase-like ATPases J166_03665 SM00388 His Kinase A (phosphoacceptor) domain J166_03665 SM00448 cheY-homologous receiver domain J166_03666 SM00448 cheY-homologous receiver domain J166_03678 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_03685 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_03685 SM00895 J166_03685 J166_03694 SM00108 Bulb-type mannose-specific lectin J166_03699 SM00650 Ribosomal RNA adenine dimethylases J166_03702 SM00382 ATPases associated with a variety of cellular activities J166_03714 SM00382 ATPases associated with a variety of cellular activities J166_03716 SM00382 ATPases associated with a variety of cellular activities J166_03726 SM00387 Histidine kinase-like ATPases J166_03726 SM00388 His Kinase A (phosphoacceptor) domain J166_03727 SM00448 cheY-homologous receiver domain J166_03727 SM00862 Transcriptional regulatory protein, C terminal J166_03729 SM00382 ATPases associated with a variety of cellular activities J166_03733 SM00382 ATPases associated with a variety of cellular activities J166_03757 SM00996 S-adenosyl-L-homocysteine hydrolase J166_03757 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J166_03764 SM00642 Alpha-amylase domain J166_03767 SM00944 Pro-kumamolisin, activation domain J166_03768 SM00829 Enoylreductase J166_03774 SM00957 SecA DEAD-like domain J166_03774 SM00958 SecA preprotein cross-linking domain J166_03778 SM00864 Tubulin/FtsZ family, GTPase domain J166_03778 SM00865 Tubulin/FtsZ family, C-terminal domain J166_03779 SM00842 Cell division protein FtsA J166_03805 SM00448 cheY-homologous receiver domain J166_03805 SM00862 Transcriptional regulatory protein, C terminal J166_03806 SM00387 Histidine kinase-like ATPases J166_03806 SM00388 His Kinase A (phosphoacceptor) domain J166_03812 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J166_03825 SM00382 ATPases associated with a variety of cellular activities J166_03829 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_03832 SM00829 Enoylreductase J166_03836 SM00448 cheY-homologous receiver domain J166_03836 SM00862 Transcriptional regulatory protein, C terminal J166_03837 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_03837 SM00387 Histidine kinase-like ATPases J166_03837 SM00388 His Kinase A (phosphoacceptor) domain J166_03839 SM00342 helix_turn_helix, arabinose operon control protein J166_03840 SM00849 Metallo-beta-lactamase superfamily J166_03854 SM00354 helix_turn _helix lactose operon repressor J166_03856 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_03856 SM00866 J166_03856 J166_03871 SM00382 ATPases associated with a variety of cellular activities J166_03876 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J166_03882 SM00387 Histidine kinase-like ATPases J166_03882 SM00388 His Kinase A (phosphoacceptor) domain J166_03882 SM00448 cheY-homologous receiver domain J166_03883 SM00448 cheY-homologous receiver domain J166_03884 SM00387 Histidine kinase-like ATPases J166_03884 SM00388 His Kinase A (phosphoacceptor) domain J166_03885 SM00749 bacterial OsmY and nodulation domain J166_03887 SM01350 J166_03887 J166_03898 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J166_03898 SM00245 tail specific protease J166_03899 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_03903 SM00936 Penicillin-binding protein 5, C-terminal domain J166_03906 SM00710 Parallel beta-helix repeats J166_03911 SM00268 Actin J166_03913 SM00382 ATPases associated with a variety of cellular activities J166_03915 SM00829 Enoylreductase J166_03918 SM00062 Bacterial periplasmic substrate-binding proteins J166_03918 SM00248 ankyrin repeats J166_03919 SM00564 beta-propeller repeat J166_03922 SM01263 J166_03922 J166_03923 SM00267 diguanylate cyclase J166_03929 SM00382 ATPases associated with a variety of cellular activities J166_03929 SM01086 C-terminal, D2-small domain, of ClpB protein J166_03945 SM00448 cheY-homologous receiver domain J166_03945 SM00850 LytTr DNA-binding domain J166_03951 SM00267 diguanylate cyclase J166_03953 SM00637 J166_03953 J166_03954 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_03954 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_03954 SM01049 J166_03954 J166_03955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_03955 SM00091 PAS domain J166_03955 SM00267 diguanylate cyclase J166_03958 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_03960 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J166_03960 SM01232 J166_03960 J166_03968 SM00382 ATPases associated with a variety of cellular activities J166_03970 SM00062 Bacterial periplasmic substrate-binding proteins J166_03976 SM00267 diguanylate cyclase J166_03994 SM00387 Histidine kinase-like ATPases J166_03994 SM00388 His Kinase A (phosphoacceptor) domain J166_03996 SM00382 ATPases associated with a variety of cellular activities J166_04012 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_04012 SM00387 Histidine kinase-like ATPases J166_04018 SM00506 Appr-1"-p processing enzyme J166_04027 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J166_04032 SM00849 Metallo-beta-lactamase superfamily J166_04035 SM00382 ATPases associated with a variety of cellular activities J166_04047 SM00861 Transketolase, pyrimidine binding domain J166_04050 SM00028 Tetratricopeptide repeats J166_04050 SM00327 von Willebrand factor (vWF) type A domain J166_04051 SM00327 von Willebrand factor (vWF) type A domain J166_04054 SM00382 ATPases associated with a variety of cellular activities J166_04056 SM00965 Secretin and TonB N terminus short domain J166_04067 SM00487 DEAD-like helicases superfamily J166_04067 SM00490 helicase superfamily c-terminal domain J166_04069 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J166_04069 SM00954 Region found in RelA / SpoT proteins J166_04070 SM01409 J166_04070 J166_04071 SM00072 Guanylate kinase homologues. J166_04076 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_04081 SM01011 Aminopeptidase P, N-terminal domain J166_04096 SM00028 Tetratricopeptide repeats J166_04096 SM00382 ATPases associated with a variety of cellular activities J166_04096 SM00421 helix_turn_helix, Lux Regulon J166_04110 SM00464 Found in ATP-dependent protease La (LON) J166_04120 SM00342 helix_turn_helix, arabinose operon control protein J166_04121 SM00862 Transcriptional regulatory protein, C terminal J166_04125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_04131 SM00917 LeuA allosteric (dimerisation) domain J166_04132 SM01329 J166_04132 J166_04136 SM00267 diguanylate cyclase J166_04147 SM00919 Malic enzyme, NAD binding domain J166_04147 SM01274 J166_04147 J166_04150 SM00387 Histidine kinase-like ATPases J166_04150 SM00388 His Kinase A (phosphoacceptor) domain J166_04150 SM00448 cheY-homologous receiver domain J166_04158 SM00421 helix_turn_helix, Lux Regulon J166_04158 SM00448 cheY-homologous receiver domain J166_04160 SM00387 Histidine kinase-like ATPases J166_04160 SM00388 His Kinase A (phosphoacceptor) domain J166_04161 SM00448 cheY-homologous receiver domain J166_04161 SM00862 Transcriptional regulatory protein, C terminal J166_04165 SM00822 J166_04165 J166_04166 SM00354 helix_turn _helix lactose operon repressor J166_04169 SM00642 Alpha-amylase domain J166_04171 SM01154 J166_04171 J166_04178 SM00450 Rhodanese Homology Domain J166_04192 SM00028 Tetratricopeptide repeats J166_04207 SM00345 helix_turn_helix gluconate operon transcriptional repressor J166_04207 SM00866 J166_04207 J166_04219 SM00382 ATPases associated with a variety of cellular activities J166_04224 SM01211 J166_04224 J166_04237 SM00656 J166_04237 J166_04243 SM00528 Domain in histone-like proteins of HNS family J166_04246 SM00382 ATPases associated with a variety of cellular activities J166_04252 SM00882 Coenzyme A transferase J166_04253 SM00882 Coenzyme A transferase J166_04256 SM00984 UDP binding domain J166_04261 SM00893 Electron transfer flavoprotein domain J166_04262 SM00893 Electron transfer flavoprotein domain J166_04277 SM00382 ATPases associated with a variety of cellular activities J166_04280 SM00116 Domain in cystathionine beta-synthase and other proteins. J166_04287 SM00487 DEAD-like helicases superfamily J166_04287 SM00490 helicase superfamily c-terminal domain J166_04293 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_04300 SM00825 Beta-ketoacyl synthase J166_04314 SM00382 ATPases associated with a variety of cellular activities J166_04318 SM00382 ATPases associated with a variety of cellular activities J166_04318 SM00448 cheY-homologous receiver domain J166_04319 SM00387 Histidine kinase-like ATPases J166_04323 SM00830 Chorismate mutase type II J166_04325 SM00382 ATPases associated with a variety of cellular activities J166_04339 SM00986 Uracil DNA glycosylase superfamily J166_04339 SM00987 UreE urease accessory protein, C-terminal domain J166_04345 SM00382 ATPases associated with a variety of cellular activities J166_04345 SM00930 J166_04345 J166_04349 SM00387 Histidine kinase-like ATPases J166_04349 SM00388 His Kinase A (phosphoacceptor) domain J166_04349 SM00448 cheY-homologous receiver domain J166_04360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_04360 SM00091 PAS domain J166_04360 SM00387 Histidine kinase-like ATPases J166_04360 SM00388 His Kinase A (phosphoacceptor) domain J166_04360 SM00448 cheY-homologous receiver domain J166_04364 SM01005 Alanine racemase, C-terminal domain J166_04366 SM00344 helix_turn_helix ASNC type J166_04377 SM00382 ATPases associated with a variety of cellular activities J166_04379 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J166_04380 SM00986 Uracil DNA glycosylase superfamily J166_04380 SM00987 UreE urease accessory protein, C-terminal domain J166_04381 SM00729 Elongator protein 3, MiaB family, Radical SAM J166_04394 SM00448 cheY-homologous receiver domain J166_04394 SM00850 LytTr DNA-binding domain J166_04395 SM00387 Histidine kinase-like ATPases J166_04402 SM00091 PAS domain J166_04402 SM00138 Methyltransferase, chemotaxis proteins J166_04402 SM00911 HWE histidine kinase J166_04403 SM00448 cheY-homologous receiver domain J166_04405 SM00382 ATPases associated with a variety of cellular activities J166_04405 SM00448 cheY-homologous receiver domain J166_04416 SM00382 ATPases associated with a variety of cellular activities J166_04431 SM00382 ATPases associated with a variety of cellular activities J166_04432 SM00631 J166_04432 J166_04437 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J166_04437 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J166_04438 SM00477 DNA/RNA non-specific endonuclease J166_04438 SM00892 DNA/RNA non-specific endonuclease J166_04453 SM00382 ATPases associated with a variety of cellular activities J166_04499 SM00382 ATPases associated with a variety of cellular activities J166_04530 SM00257 Lysin motif J166_04535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J166_04535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J166_04535 SM00493 J166_04535 J166_04546 SM00487 DEAD-like helicases superfamily J166_04546 SM00490 helicase superfamily c-terminal domain J166_04553 SM00986 Uracil DNA glycosylase superfamily J166_04553 SM00987 UreE urease accessory protein, C-terminal domain J166_04554 SM00448 cheY-homologous receiver domain J166_04556 SM00382 ATPases associated with a variety of cellular activities J166_04557 SM00487 DEAD-like helicases superfamily J166_04557 SM00490 helicase superfamily c-terminal domain J166_04559 SM00357 Cold shock protein domain J166_04559 SM00382 ATPases associated with a variety of cellular activities J166_04559 SM00959 Rho termination factor, N-terminal domain J166_04565 SM00487 DEAD-like helicases superfamily J166_04573 SM00382 ATPases associated with a variety of cellular activities J166_04575 SM00257 Lysin motif J166_04581 SM01150 J166_04581 J166_04590 SM00644 J166_04590 J166_04592 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J166_04599 SM01217 J166_04599 J166_04600 SM00905 Dihydroneopterin aldolase J166_04605 SM00400 zinc finger J166_04605 SM00493 J166_04605 J166_04605 SM00766 DNA primase DnaG DnaB-binding J166_04628 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_04628 SM00091 PAS domain J166_04640 SM00347 helix_turn_helix multiple antibiotic resistance protein J166_04647 SM00155 Phospholipase D. Active site motifs. J166_04663 SM00796 Allophanate hydrolase subunit 1 J166_04663 SM00797 Allophanate hydrolase subunit 2 J166_04663 SM00878 Biotin carboxylase C-terminal domain J166_04677 SM00382 ATPases associated with a variety of cellular activities J166_04687 SM00829 Enoylreductase J166_04695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J166_04695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J166_04695 SM00091 PAS domain J166_04695 SM00267 diguanylate cyclase J166_04701 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J166_04707 SM00014 Acid phosphatase homologues J166_04709 SM00028 Tetratricopeptide repeats