locus-tag class description J168_00005 PF02796 Helix-turn-helix domain of resolvase J168_00005 PF00239 Resolvase, N terminal domain J168_00007 PF02384 N-6 DNA Methylase J168_00008 PF07669 Eco57I restriction-modification methylase J168_00010 PF17841 BID domain of Bartonella effector protein (Bep) J168_00010 PF03389 MobA/MobL family J168_00010 PF01443 Viral (Superfamily 1) RNA helicase J168_00012 PF02534 Type IV secretory system Conjugative DNA transfer J168_00015 PF01850 PIN domain J168_00017 PF02796 Helix-turn-helix domain of resolvase J168_00017 PF00239 Resolvase, N terminal domain J168_00024 PF01527 Transposase J168_00027 PF01526 Tn3 transposase DDE domain J168_00027 PF13700 Domain of unknown function (DUF4158) J168_00029 PF00239 Resolvase, N terminal domain J168_00029 PF02796 Helix-turn-helix domain of resolvase J168_00031 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J168_00035 PF03377 TAL effector repeat J168_00036 PF02796 Helix-turn-helix domain of resolvase J168_00036 PF00239 Resolvase, N terminal domain J168_00039 PF13700 Domain of unknown function (DUF4158) J168_00039 PF01526 Tn3 transposase DDE domain J168_00040 PF03695 Uncharacterised protein family (UPF0149) J168_00040 PF02810 SEC-C motif J168_00042 PF03377 TAL effector repeat J168_00043 PF13276 HTH-like domain J168_00043 PF13333 Integrase core domain J168_00043 PF00665 Integrase core domain J168_00044 PF13276 HTH-like domain J168_00044 PF00665 Integrase core domain J168_00044 PF13333 Integrase core domain J168_00045 PF00239 Resolvase, N terminal domain J168_00045 PF02796 Helix-turn-helix domain of resolvase J168_00046 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J168_00051 PF13614 AAA domain J168_00052 PF06613 KorB C-terminal beta-barrel domain J168_00052 PF02195 ParB-like nuclease domain J168_00052 PF08535 KorB domain J168_00055 PF01527 Transposase J168_00059 PF01695 IstB-like ATP binding protein J168_00060 PF02796 Helix-turn-helix domain of resolvase J168_00060 PF00665 Integrase core domain J168_00071 PF01580 FtsK/SpoIIIE family J168_00071 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J168_00071 PF09397 Ftsk gamma domain J168_00071 PF17854 FtsK alpha domain J168_00073 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J168_00079 PF03695 Uncharacterised protein family (UPF0149) J168_00079 PF02810 SEC-C motif J168_00080 PF01526 Tn3 transposase DDE domain J168_00080 PF13700 Domain of unknown function (DUF4158) J168_00083 PF08299 Bacterial dnaA protein helix-turn-helix J168_00083 PF00308 Bacterial dnaA protein J168_00083 PF11638 DnaA N-terminal domain J168_00084 PF02767 DNA polymerase III beta subunit, central domain J168_00084 PF02768 DNA polymerase III beta subunit, C-terminal domain J168_00084 PF00712 DNA polymerase III beta subunit, N-terminal domain J168_00085 PF02463 RecF/RecN/SMC N terminal domain J168_00087 PF00204 DNA gyrase B J168_00087 PF01751 Toprim domain J168_00087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00087 PF00986 DNA gyrase B subunit, carboxyl terminus J168_00087 PF18053 DNA gyrase B subunit insert domain J168_00089 PF01435 Peptidase family M48 J168_00091 PF03544 Gram-negative bacterial TonB protein C-terminal J168_00092 PF01618 MotA/TolQ/ExbB proton channel family J168_00093 PF02472 Biopolymer transport protein ExbD/TolR J168_00094 PF02472 Biopolymer transport protein ExbD/TolR J168_00095 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J168_00097 PF13396 Phospholipase_D-nuclease N-terminal J168_00097 PF13091 PLD-like domain J168_00100 PF04055 Radical SAM superfamily J168_00102 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J168_00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J168_00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J168_00106 PF03572 Peptidase family S41 J168_00106 PF13180 PDZ domain J168_00107 PF01551 Peptidase family M23 J168_00109 PF04389 Peptidase family M28 J168_00111 PF00150 Cellulase (glycosyl hydrolase family 5) J168_00112 PF00150 Cellulase (glycosyl hydrolase family 5) J168_00119 PF04616 Glycosyl hydrolases family 43 J168_00123 PF00331 Glycosyl hydrolase family 10 J168_00123 PF03422 Carbohydrate binding module (family 6) J168_00123 PF00553 Cellulose binding domain J168_00125 PF03422 Carbohydrate binding module (family 6) J168_00125 PF00553 Cellulose binding domain J168_00125 PF00331 Glycosyl hydrolase family 10 J168_00126 PF02614 Glucuronate isomerase J168_00127 PF16355 Domain of unknown function (DUF4982) J168_00127 PF00703 Glycosyl hydrolases family 2 J168_00127 PF02837 Glycosyl hydrolases family 2, sugar binding domain J168_00127 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J168_00127 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J168_00128 PF00331 Glycosyl hydrolase family 10 J168_00129 PF08450 SMP-30/Gluconolactonase/LRE-like region J168_00132 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J168_00132 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J168_00134 PF00202 Aminotransferase class-III J168_00137 PF00171 Aldehyde dehydrogenase family J168_00142 PF08125 Mannitol dehydrogenase C-terminal domain J168_00142 PF01232 Mannitol dehydrogenase Rossmann domain J168_00143 PF07691 PA14 domain J168_00143 PF01915 Glycosyl hydrolase family 3 C-terminal domain J168_00143 PF14310 Fibronectin type III-like domain J168_00143 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_00144 PF04616 Glycosyl hydrolases family 43 J168_00144 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J168_00145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J168_00145 PF13378 Enolase C-terminal domain-like J168_00147 PF07477 Glycosyl hydrolase family 67 C-terminus J168_00147 PF07488 Glycosyl hydrolase family 67 middle domain J168_00147 PF03648 Glycosyl hydrolase family 67 N-terminus J168_00148 PF00356 Bacterial regulatory proteins, lacI family J168_00150 PF01171 PP-loop family J168_00151 PF04381 Putative exonuclease, RdgC J168_00153 PF12697 Alpha/beta hydrolase family J168_00154 PF00762 Ferrochelatase J168_00156 PF02416 mttA/Hcf106 family J168_00157 PF02416 mttA/Hcf106 family J168_00158 PF00902 Sec-independent protein translocase protein (TatC) J168_00160 PF00958 GMP synthase C terminal domain J168_00160 PF00117 Glutamine amidotransferase class-I J168_00162 PF00437 Type II/IV secretion system protein J168_00162 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J168_00163 PF02091 Glycyl-tRNA synthetase alpha subunit J168_00164 PF02092 Glycyl-tRNA synthetase beta subunit J168_00164 PF05746 DALR anticodon binding domain J168_00165 PF13181 Tetratricopeptide repeat J168_00170 PF00593 TonB dependent receptor J168_00170 PF07715 TonB-dependent Receptor Plug Domain J168_00171 PF17243 POTRA domain TamA domain 1 J168_00171 PF01103 Surface antigen J168_00172 PF04357 TamB, inner membrane protein subunit of TAM complex J168_00176 PF13570 PQQ-like domain J168_00176 PF13360 PQQ-like domain J168_00176 PF01011 PQQ enzyme repeat J168_00180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J168_00180 PF06165 Glycosyltransferase family 36 J168_00182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00182 PF00512 His Kinase A (phospho-acceptor) domain J168_00183 PF02659 Putative manganese efflux pump J168_00184 PF09339 IclR helix-turn-helix domain J168_00184 PF01614 Bacterial transcriptional regulator J168_00185 PF07690 Major Facilitator Superfamily J168_00186 PF05336 L-rhamnose mutarotase J168_00188 PF13378 Enolase C-terminal domain-like J168_00188 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J168_00189 PF01557 Fumarylacetoacetate (FAA) hydrolase family J168_00192 PF00248 Aldo/keto reductase family J168_00193 PF04616 Glycosyl hydrolases family 43 J168_00193 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J168_00198 PF00196 Bacterial regulatory proteins, luxR family J168_00198 PF00072 Response regulator receiver domain J168_00199 PF13193 AMP-binding enzyme C-terminal domain J168_00199 PF00501 AMP-binding enzyme J168_00199 PF16177 Acetyl-coenzyme A synthetase N-terminus J168_00201 PF04341 Protein of unknown function, DUF485 J168_00202 PF00474 Sodium:solute symporter family J168_00204 PF09312 SurA N-terminal domain J168_00206 PF00480 ROK family J168_00208 PF03372 Endonuclease/Exonuclease/phosphatase family J168_00210 PF04226 Transglycosylase associated protein J168_00211 PF01648 4'-phosphopantetheinyl transferase superfamily J168_00212 PF09423 PhoD-like phosphatase J168_00212 PF16655 PhoD-like phosphatase, N-terminal domain J168_00214 PF09423 PhoD-like phosphatase J168_00214 PF16655 PhoD-like phosphatase, N-terminal domain J168_00215 PF02527 rRNA small subunit methyltransferase G J168_00219 PF13533 Biotin-lipoyl like J168_00220 PF00873 AcrB/AcrD/AcrF family J168_00221 PF00830 Ribosomal L28 family J168_00222 PF00471 Ribosomal protein L33 J168_00223 PF04909 Amidohydrolase J168_00224 PF04303 PrpF protein J168_00225 PF03737 Aldolase/RraA J168_00226 PF03466 LysR substrate binding domain J168_00226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00227 PF13091 PLD-like domain J168_00227 PF13396 Phospholipase_D-nuclease N-terminal J168_00229 PF13361 UvrD-like helicase C-terminal domain J168_00229 PF00580 UvrD/REP helicase N-terminal domain J168_00230 PF12464 Maltose acetyltransferase J168_00230 PF14602 Hexapeptide repeat of succinyl-transferase J168_00235 PF05638 Type VI secretion system effector, Hcp J168_00240 PF17871 AAA lid domain J168_00240 PF10431 C-terminal, D2-small domain, of ClpB protein J168_00240 PF07724 AAA domain (Cdc48 subfamily) J168_00240 PF00004 ATPase family associated with various cellular activities (AAA) J168_00247 PF00328 Histidine phosphatase superfamily (branch 2) J168_00250 PF08281 Sigma-70, region 4 J168_00250 PF04542 Sigma-70 region 2 J168_00252 PF03793 PASTA domain J168_00252 PF00069 Protein kinase domain J168_00255 PF04717 Type VI secretion system, phage-baseplate injector J168_00263 PF00069 Protein kinase domain J168_00263 PF03793 PASTA domain J168_00269 PF00476 DNA polymerase family A J168_00269 PF01612 3'-5' exonuclease J168_00269 PF01367 5'-3' exonuclease, C-terminal SAM fold J168_00269 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J168_00270 PF01218 Coproporphyrinogen III oxidase J168_00273 PF07676 WD40-like Beta Propeller Repeat J168_00273 PF00326 Prolyl oligopeptidase family J168_00277 PF04820 Tryptophan halogenase J168_00278 PF00550 Phosphopantetheine attachment site J168_00280 PF01553 Acyltransferase J168_00281 PF07977 FabA-like domain J168_00291 PF00535 Glycosyl transferase family 2 J168_00293 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_00293 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_00294 PF05166 YcgL domain J168_00297 PF00723 Glycosyl hydrolases family 15 J168_00298 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J168_00298 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J168_00299 PF00999 Sodium/hydrogen exchanger family J168_00299 PF02254 TrkA-N domain J168_00300 PF00194 Eukaryotic-type carbonic anhydrase J168_00301 PF01769 Divalent cation transporter J168_00301 PF00571 CBS domain J168_00301 PF03448 MgtE intracellular N domain J168_00302 PF13607 Succinyl-CoA ligase like flavodoxin domain J168_00302 PF00583 Acetyltransferase (GNAT) family J168_00302 PF13380 CoA binding domain J168_00304 PF03477 ATP cone domain J168_00304 PF00317 Ribonucleotide reductase, all-alpha domain J168_00304 PF02867 Ribonucleotide reductase, barrel domain J168_00305 PF00268 Ribonucleotide reductase, small chain J168_00311 PF08546 Ketopantoate reductase PanE/ApbA C terminal J168_00311 PF02558 Ketopantoate reductase PanE/ApbA J168_00314 PF01061 ABC-2 type transporter J168_00315 PF00005 ABC transporter J168_00316 PF00111 2Fe-2S iron-sulfur cluster binding domain J168_00316 PF00175 Oxidoreductase NAD-binding domain J168_00316 PF00970 Oxidoreductase FAD-binding domain J168_00317 PF12833 Helix-turn-helix domain J168_00317 PF01965 DJ-1/PfpI family J168_00319 PF00593 TonB dependent receptor J168_00319 PF07715 TonB-dependent Receptor Plug Domain J168_00321 PF01545 Cation efflux family J168_00321 PF16916 Dimerisation domain of Zinc Transporter J168_00322 PF02583 Metal-sensitive transcriptional repressor J168_00323 PF01229 Glycosyl hydrolases family 39 J168_00325 PF01381 Helix-turn-helix J168_00327 PF00005 ABC transporter J168_00330 PF04820 Tryptophan halogenase J168_00334 PF02798 Glutathione S-transferase, N-terminal domain J168_00334 PF00043 Glutathione S-transferase, C-terminal domain J168_00335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J168_00335 PF00326 Prolyl oligopeptidase family J168_00339 PF00490 Delta-aminolevulinic acid dehydratase J168_00341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00341 PF03466 LysR substrate binding domain J168_00343 PF00258 Flavodoxin J168_00343 PF00667 FAD binding domain J168_00343 PF00175 Oxidoreductase NAD-binding domain J168_00345 PF08501 Shikimate dehydrogenase substrate binding domain J168_00345 PF01488 Shikimate / quinate 5-dehydrogenase J168_00345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J168_00348 PF06733 DEAD_2 J168_00348 PF13307 Helicase C-terminal domain J168_00349 PF06628 Catalase-related immune-responsive J168_00349 PF00199 Catalase J168_00352 PF01207 Dihydrouridine synthase (Dus) J168_00354 PF00072 Response regulator receiver domain J168_00354 PF00486 Transcriptional regulatory protein, C terminal J168_00355 PF00672 HAMP domain J168_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00355 PF00512 His Kinase A (phospho-acceptor) domain J168_00358 PF06167 Glucose-regulated metallo-peptidase M90 J168_00360 PF08279 HTH domain J168_00360 PF03099 Biotin/lipoate A/B protein ligase family J168_00360 PF02237 Biotin protein ligase C terminal domain J168_00361 PF03309 Type III pantothenate kinase J168_00364 PF02223 Thymidylate kinase J168_00369 PF00491 Arginase family J168_00372 PF05532 CsbD-like J168_00373 PF00579 tRNA synthetases class I (W and Y) J168_00374 PF00753 Metallo-beta-lactamase superfamily J168_00377 PF00892 EamA-like transporter family J168_00378 PF00892 EamA-like transporter family J168_00382 PF00005 ABC transporter J168_00383 PF13533 Biotin-lipoyl like J168_00384 PF07730 Histidine kinase J168_00385 PF00072 Response regulator receiver domain J168_00385 PF00196 Bacterial regulatory proteins, luxR family J168_00388 PF00199 Catalase J168_00389 PF04542 Sigma-70 region 2 J168_00389 PF08281 Sigma-70, region 4 J168_00391 PF02789 Cytosol aminopeptidase family, N-terminal domain J168_00391 PF00883 Cytosol aminopeptidase family, catalytic domain J168_00392 PF13419 Haloacid dehalogenase-like hydrolase J168_00393 PF01594 AI-2E family transporter J168_00397 PF00595 PDZ domain J168_00401 PF00512 His Kinase A (phospho-acceptor) domain J168_00401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00401 PF08521 Two-component sensor kinase N-terminal J168_00402 PF00486 Transcriptional regulatory protein, C terminal J168_00402 PF00072 Response regulator receiver domain J168_00403 PF08338 Domain of unknown function (DUF1731) J168_00403 PF01370 NAD dependent epimerase/dehydratase family J168_00411 PF01139 tRNA-splicing ligase RtcB J168_00417 PF00440 Bacterial regulatory proteins, tetR family J168_00418 PF00970 Oxidoreductase FAD-binding domain J168_00418 PF00111 2Fe-2S iron-sulfur cluster binding domain J168_00418 PF00175 Oxidoreductase NAD-binding domain J168_00419 PF00487 Fatty acid desaturase J168_00420 PF00563 EAL domain J168_00420 PF12792 CSS motif domain associated with EAL J168_00423 PF01078 Magnesium chelatase, subunit ChlI J168_00423 PF13335 Magnesium chelatase, subunit ChlI C-terminal J168_00424 PF04380 Membrane fusogenic activity J168_00425 PF00543 Nitrogen regulatory protein P-II J168_00430 PF17284 Spermidine synthase tetramerisation domain J168_00431 PF17944 Arginine decarboxylase C-terminal helical extension J168_00431 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J168_00431 PF17810 Arginine decarboxylase helical bundle domain J168_00432 PF00501 AMP-binding enzyme J168_00432 PF00668 Condensation domain J168_00432 PF00975 Thioesterase domain J168_00432 PF00550 Phosphopantetheine attachment site J168_00432 PF13193 AMP-binding enzyme C-terminal domain J168_00433 PF03033 Glycosyltransferase family 28 N-terminal domain J168_00434 PF01757 Acyltransferase family J168_00435 PF00106 short chain dehydrogenase J168_00438 PF03485 Arginyl tRNA synthetase N terminal domain J168_00438 PF05746 DALR anticodon binding domain J168_00438 PF00750 tRNA synthetases class I (R) J168_00439 PF04002 RadC-like JAB domain J168_00440 PF04127 DNA / pantothenate metabolism flavoprotein J168_00440 PF02441 Flavoprotein J168_00441 PF00692 dUTPase J168_00442 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J168_00442 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J168_00442 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J168_00442 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J168_00445 PF00535 Glycosyl transferase family 2 J168_00446 PF01370 NAD dependent epimerase/dehydratase family J168_00448 PF17762 HTH domain found in ParB protein J168_00448 PF02195 ParB-like nuclease domain J168_00449 PF13614 AAA domain J168_00451 PF00156 Phosphoribosyl transferase domain J168_00452 PF03372 Endonuclease/Exonuclease/phosphatase family J168_00453 PF07690 Major Facilitator Superfamily J168_00455 PF03702 Anhydro-N-acetylmuramic acid kinase J168_00456 PF01551 Peptidase family M23 J168_00456 PF04225 Opacity-associated protein A LysM-like domain J168_00457 PF00579 tRNA synthetases class I (W and Y) J168_00464 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J168_00464 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J168_00464 PF06827 Zinc finger found in FPG and IleRS J168_00466 PF04349 Periplasmic glucan biosynthesis protein, MdoG J168_00467 PF00512 His Kinase A (phospho-acceptor) domain J168_00467 PF01590 GAF domain J168_00467 PF08446 PAS fold J168_00467 PF00360 Phytochrome region J168_00467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00468 PF00265 Thymidine kinase J168_00469 PF00580 UvrD/REP helicase N-terminal domain J168_00469 PF13361 UvrD-like helicase C-terminal domain J168_00472 PF04337 Protein of unknown function, DUF480 J168_00474 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J168_00475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J168_00476 PF04820 Tryptophan halogenase J168_00479 PF00356 Bacterial regulatory proteins, lacI family J168_00481 PF01553 Acyltransferase J168_00482 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_00482 PF08659 KR domain J168_00482 PF00107 Zinc-binding dehydrogenase J168_00482 PF00550 Phosphopantetheine attachment site J168_00482 PF16197 Ketoacyl-synthetase C-terminal extension J168_00482 PF14765 Polyketide synthase dehydratase J168_00482 PF08240 Alcohol dehydrogenase GroES-like domain J168_00482 PF00698 Acyl transferase domain J168_00482 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_00486 PF00665 Integrase core domain J168_00486 PF02796 Helix-turn-helix domain of resolvase J168_00487 PF01695 IstB-like ATP binding protein J168_00488 PF00150 Cellulase (glycosyl hydrolase family 5) J168_00489 PF08240 Alcohol dehydrogenase GroES-like domain J168_00489 PF00107 Zinc-binding dehydrogenase J168_00490 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_00490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J168_00491 PF00310 Glutamine amidotransferases class-II J168_00491 PF01493 GXGXG motif J168_00491 PF01645 Conserved region in glutamate synthase J168_00491 PF04898 Glutamate synthase central domain J168_00495 PF01804 Penicillin amidase J168_00497 PF03466 LysR substrate binding domain J168_00497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00500 PF02397 Bacterial sugar transferase J168_00501 PF02350 UDP-N-acetylglucosamine 2-epimerase J168_00503 PF03808 Glycosyl transferase WecB/TagA/CpsF family J168_00504 PF13439 Glycosyltransferase Family 4 J168_00504 PF00534 Glycosyl transferases group 1 J168_00510 PF00733 Asparagine synthase J168_00510 PF13537 Glutamine amidotransferase domain J168_00513 PF16363 GDP-mannose 4,6 dehydratase J168_00516 PF00664 ABC transporter transmembrane region J168_00516 PF00005 ABC transporter J168_00518 PF13537 Glutamine amidotransferase domain J168_00518 PF00733 Asparagine synthase J168_00523 PF00685 Sulfotransferase domain J168_00540 PF00271 Helicase conserved C-terminal domain J168_00540 PF00270 DEAD/DEAH box helicase J168_00540 PF09369 Domain of unknown function (DUF1998) J168_00541 PF03006 Haemolysin-III related J168_00544 PF00106 short chain dehydrogenase J168_00546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00546 PF03466 LysR substrate binding domain J168_00550 PF02525 Flavodoxin-like fold J168_00552 PF01527 Transposase J168_00553 PF13333 Integrase core domain J168_00553 PF00665 Integrase core domain J168_00553 PF13276 HTH-like domain J168_00561 PF05532 CsbD-like J168_00565 PF16485 Protealysin propeptide J168_00565 PF01447 Thermolysin metallopeptidase, catalytic domain J168_00565 PF02868 Thermolysin metallopeptidase, alpha-helical domain J168_00567 PF13344 Haloacid dehalogenase-like hydrolase J168_00567 PF00293 NUDIX domain J168_00570 PF00085 Thioredoxin J168_00571 PF08946 Osmosensory transporter coiled coil J168_00571 PF00083 Sugar (and other) transporter J168_00579 PF07726 ATPase family associated with various cellular activities (AAA) J168_00579 PF17863 AAA lid domain J168_00585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J168_00586 PF00155 Aminotransferase class I and II J168_00587 PF07715 TonB-dependent Receptor Plug Domain J168_00587 PF00593 TonB dependent receptor J168_00589 PF07883 Cupin domain J168_00590 PF00171 Aldehyde dehydrogenase family J168_00594 PF02735 Ku70/Ku80 beta-barrel domain J168_00595 PF01070 FMN-dependent dehydrogenase J168_00596 PF00144 Beta-lactamase J168_00597 PF07730 Histidine kinase J168_00598 PF00196 Bacterial regulatory proteins, luxR family J168_00598 PF00072 Response regulator receiver domain J168_00602 PF18500 CadC C-terminal domain 1 J168_00602 PF00486 Transcriptional regulatory protein, C terminal J168_00603 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J168_00603 PF12241 Trans-2-enoyl-CoA reductase catalytic region J168_00603 PF07055 Enoyl reductase FAD binding domain J168_00605 PF00294 pfkB family carbohydrate kinase J168_00617 PF01527 Transposase J168_00618 PF13276 HTH-like domain J168_00618 PF00665 Integrase core domain J168_00618 PF13333 Integrase core domain J168_00619 PF11896 Domain of unknown function (DUF3416) J168_00619 PF00128 Alpha amylase, catalytic domain J168_00620 PF00128 Alpha amylase, catalytic domain J168_00620 PF16657 Maltogenic Amylase, C-terminal domain J168_00621 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J168_00621 PF00128 Alpha amylase, catalytic domain J168_00621 PF02806 Alpha amylase, C-terminal all-beta domain J168_00623 PF00248 Aldo/keto reductase family J168_00624 PF00135 Carboxylesterase family J168_00625 PF13472 GDSL-like Lipase/Acylhydrolase family J168_00625 PF07859 alpha/beta hydrolase fold J168_00627 PF03480 Bacterial extracellular solute-binding protein, family 7 J168_00629 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J168_00630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J168_00630 PF04616 Glycosyl hydrolases family 43 J168_00631 PF00356 Bacterial regulatory proteins, lacI family J168_00632 PF04962 KduI/IolB family J168_00635 PF00657 GDSL-like Lipase/Acylhydrolase J168_00639 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J168_00640 PF01037 Lrp/AsnC ligand binding domain J168_00641 PF00593 TonB dependent receptor J168_00641 PF07660 Secretin and TonB N terminus short domain J168_00641 PF07715 TonB-dependent Receptor Plug Domain J168_00642 PF01734 Patatin-like phospholipase J168_00644 PF00005 ABC transporter J168_00647 PF00005 ABC transporter J168_00648 PF00528 Binding-protein-dependent transport system inner membrane component J168_00650 PF03781 Sulfatase-modifying factor enzyme 1 J168_00650 PF12867 DinB superfamily J168_00653 PF01381 Helix-turn-helix J168_00657 PF10609 NUBPL iron-transfer P-loop NTPase J168_00657 PF01883 Iron-sulfur cluster assembly protein J168_00660 PF13091 PLD-like domain J168_00661 PF03061 Thioesterase superfamily J168_00669 PF02673 Bacitracin resistance protein BacA J168_00670 PF03951 Glutamine synthetase, beta-Grasp domain J168_00670 PF00120 Glutamine synthetase, catalytic domain J168_00671 PF00543 Nitrogen regulatory protein P-II J168_00672 PF00909 Ammonium Transporter Family J168_00673 PF00989 PAS fold J168_00673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00673 PF00512 His Kinase A (phospho-acceptor) domain J168_00674 PF00072 Response regulator receiver domain J168_00674 PF02954 Bacterial regulatory protein, Fis family J168_00674 PF00158 Sigma-54 interaction domain J168_00675 PF00080 Copper/zinc superoxide dismutase (SODC) J168_00676 PF00080 Copper/zinc superoxide dismutase (SODC) J168_00679 PF00108 Thiolase, N-terminal domain J168_00679 PF02803 Thiolase, C-terminal domain J168_00686 PF00581 Rhodanese-like domain J168_00687 PF02556 Preprotein translocase subunit SecB J168_00688 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J168_00688 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J168_00690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J168_00690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J168_00690 PF00205 Thiamine pyrophosphate enzyme, central domain J168_00691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00692 PF00072 Response regulator receiver domain J168_00692 PF00158 Sigma-54 interaction domain J168_00692 PF02954 Bacterial regulatory protein, Fis family J168_00695 PF07690 Major Facilitator Superfamily J168_00696 PF00588 SpoU rRNA Methylase family J168_00699 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J168_00699 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J168_00700 PF02661 Fic/DOC family J168_00700 PF13784 Fic/DOC family N-terminal J168_00701 PF13784 Fic/DOC family N-terminal J168_00701 PF02661 Fic/DOC family J168_00702 PF00561 alpha/beta hydrolase fold J168_00703 PF03692 Putative zinc- or iron-chelating domain J168_00704 PF00501 AMP-binding enzyme J168_00706 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J168_00708 PF01820 D-ala D-ala ligase N-terminus J168_00708 PF07478 D-ala D-ala ligase C-terminus J168_00710 PF03109 ABC1 family J168_00712 PF00849 RNA pseudouridylate synthase J168_00714 PF00472 RF-1 domain J168_00716 PF01112 Asparaginase J168_00717 PF01432 Peptidase family M3 J168_00718 PF12706 Beta-lactamase superfamily domain J168_00721 PF12833 Helix-turn-helix domain J168_00722 PF00999 Sodium/hydrogen exchanger family J168_00723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00723 PF03466 LysR substrate binding domain J168_00724 PF01274 Malate synthase J168_00725 PF00463 Isocitrate lyase family J168_00726 PF00990 Diguanylate cyclase, GGDEF domain J168_00730 PF00326 Prolyl oligopeptidase family J168_00731 PF00364 Biotin-requiring enzyme J168_00731 PF00289 Biotin carboxylase, N-terminal domain J168_00731 PF02785 Biotin carboxylase C-terminal domain J168_00731 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J168_00732 PF01039 Carboxyl transferase domain J168_00733 PF02770 Acyl-CoA dehydrogenase, middle domain J168_00733 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_00733 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_00744 PF02492 CobW/HypB/UreG, nucleotide-binding domain J168_00744 PF07683 Cobalamin synthesis protein cobW C-terminal domain J168_00748 PF03969 AFG1-like ATPase J168_00749 PF01047 MarR family J168_00750 PF02566 OsmC-like protein J168_00755 PF00107 Zinc-binding dehydrogenase J168_00755 PF16884 N-terminal domain of oxidoreductase J168_00758 PF00849 RNA pseudouridylate synthase J168_00760 PF00593 TonB dependent receptor J168_00762 PF04408 Helicase associated domain (HA2) J168_00762 PF00270 DEAD/DEAH box helicase J168_00762 PF08482 ATP-dependent helicase C-terminal J168_00762 PF00271 Helicase conserved C-terminal domain J168_00763 PF07308 Protein of unknown function (DUF1456) J168_00764 PF00576 HIUase/Transthyretin family J168_00765 PF13454 FAD-NAD(P)-binding J168_00766 PF09349 OHCU decarboxylase J168_00766 PF01014 Uricase J168_00769 PF00266 Aminotransferase class-V J168_00770 PF07687 Peptidase dimerisation domain J168_00770 PF01546 Peptidase family M20/M25/M40 J168_00771 PF03466 LysR substrate binding domain J168_00771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00772 PF07690 Major Facilitator Superfamily J168_00775 PF01425 Amidase J168_00776 PF01156 Inosine-uridine preferring nucleoside hydrolase J168_00778 PF00860 Permease family J168_00779 PF00111 2Fe-2S iron-sulfur cluster binding domain J168_00780 PF00355 Rieske [2Fe-2S] domain J168_00781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00781 PF03466 LysR substrate binding domain J168_00782 PF01026 TatD related DNase J168_00785 PF03466 LysR substrate binding domain J168_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00786 PF07690 Major Facilitator Superfamily J168_00788 PF00561 alpha/beta hydrolase fold J168_00789 PF02146 Sir2 family J168_00790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J168_00791 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J168_00791 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J168_00793 PF00551 Formyl transferase J168_00794 PF00486 Transcriptional regulatory protein, C terminal J168_00794 PF00072 Response regulator receiver domain J168_00795 PF00672 HAMP domain J168_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00795 PF00512 His Kinase A (phospho-acceptor) domain J168_00796 PF00529 HlyD membrane-fusion protein of T1SS J168_00796 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_00797 PF00873 AcrB/AcrD/AcrF family J168_00798 PF02321 Outer membrane efflux protein J168_00800 PF02219 Methylenetetrahydrofolate reductase J168_00801 PF02677 Epoxyqueuosine reductase QueH J168_00802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00802 PF03466 LysR substrate binding domain J168_00803 PF03358 NADPH-dependent FMN reductase J168_00805 PF08267 Cobalamin-independent synthase, N-terminal domain J168_00805 PF01717 Cobalamin-independent synthase, Catalytic domain J168_00806 PF03812 2-keto-3-deoxygluconate permease J168_00808 PF05368 NmrA-like family J168_00809 PF01638 HxlR-like helix-turn-helix J168_00813 PF00665 Integrase core domain J168_00813 PF13333 Integrase core domain J168_00813 PF13276 HTH-like domain J168_00814 PF01527 Transposase J168_00815 PF13495 Phage integrase, N-terminal SAM-like domain J168_00815 PF00589 Phage integrase family J168_00816 PF00920 Dehydratase family J168_00819 PF00132 Bacterial transferase hexapeptide (six repeats) J168_00820 PF07690 Major Facilitator Superfamily J168_00821 PF01966 HD domain J168_00821 PF11871 Domain of unknown function (DUF3391) J168_00825 PF00171 Aldehyde dehydrogenase family J168_00827 PF01494 FAD binding domain J168_00830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J168_00830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J168_00831 PF00230 Major intrinsic protein J168_00832 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J168_00832 PF01266 FAD dependent oxidoreductase J168_00833 PF00455 DeoR C terminal sensor domain J168_00833 PF08220 DeoR-like helix-turn-helix domain J168_00835 PF00355 Rieske [2Fe-2S] domain J168_00836 PF01144 Coenzyme A transferase J168_00837 PF01144 Coenzyme A transferase J168_00838 PF00108 Thiolase, N-terminal domain J168_00838 PF02803 Thiolase, C-terminal domain J168_00839 PF00775 Dioxygenase J168_00839 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J168_00841 PF00206 Lyase J168_00841 PF10397 Adenylosuccinate lyase C-terminus J168_00842 PF12146 Serine aminopeptidase, S33 J168_00843 PF02627 Carboxymuconolactone decarboxylase family J168_00845 PF09339 IclR helix-turn-helix domain J168_00845 PF01614 Bacterial transcriptional regulator J168_00847 PF07859 alpha/beta hydrolase fold J168_00848 PF10677 Protein of unknown function (DUF2490) J168_00849 PF13932 GidA associated domain J168_00849 PF01134 Glucose inhibited division protein A J168_00851 PF00291 Pyridoxal-phosphate dependent enzyme J168_00855 PF13649 Methyltransferase domain J168_00857 PF12697 Alpha/beta hydrolase family J168_00859 PF00155 Aminotransferase class I and II J168_00860 PF04055 Radical SAM superfamily J168_00860 PF06968 Biotin and Thiamin Synthesis associated domain J168_00862 PF01040 UbiA prenyltransferase family J168_00866 PF05819 NolX protein J168_00874 PF01313 Bacterial export proteins, family 3 J168_00875 PF00813 FliP family J168_00878 PF00771 FHIPEP family J168_00879 PF01312 FlhB HrpN YscU SpaS Family J168_00882 PF01514 Secretory protein of YscJ/FliF family J168_00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain J168_00885 PF18269 T3SS EscN ATPase C-terminal domain J168_00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J168_00887 PF01311 Bacterial export proteins, family 1 J168_00890 PF01464 Transglycosylase SLT domain J168_00893 PF12795 Mechanosensitive ion channel porin domain J168_00893 PF12794 Mechanosensitive ion channel inner membrane domain 1 J168_00893 PF00924 Mechanosensitive ion channel J168_00894 PF00884 Sulfatase J168_00895 PF03109 ABC1 family J168_00896 PF03109 ABC1 family J168_00897 PF05661 Protein of unknown function (DUF808) J168_00898 PF00990 Diguanylate cyclase, GGDEF domain J168_00898 PF00072 Response regulator receiver domain J168_00899 PF08323 Starch synthase catalytic domain J168_00899 PF00534 Glycosyl transferases group 1 J168_00900 PF00128 Alpha amylase, catalytic domain J168_00900 PF02806 Alpha amylase, C-terminal all-beta domain J168_00900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J168_00901 PF00128 Alpha amylase, catalytic domain J168_00901 PF11941 Domain of unknown function (DUF3459) J168_00901 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J168_00902 PF02446 4-alpha-glucanotransferase J168_00903 PF00128 Alpha amylase, catalytic domain J168_00905 PF00128 Alpha amylase, catalytic domain J168_00905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J168_00906 PF13460 NAD(P)H-binding J168_00909 PF06903 VirK protein J168_00910 PF02321 Outer membrane efflux protein J168_00913 PF00873 AcrB/AcrD/AcrF family J168_00916 PF00270 DEAD/DEAH box helicase J168_00916 PF00271 Helicase conserved C-terminal domain J168_00918 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J168_00918 PF00364 Biotin-requiring enzyme J168_00918 PF02817 e3 binding domain J168_00920 PF02779 Transketolase, pyrimidine binding domain J168_00920 PF02780 Transketolase, C-terminal domain J168_00921 PF00676 Dehydrogenase E1 component J168_00923 PF03301 Tryptophan 2,3-dioxygenase J168_00924 PF00854 POT family J168_00926 PF01047 MarR family J168_00927 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J168_00928 PF04209 homogentisate 1,2-dioxygenase J168_00931 PF03334 Na+/H+ antiporter subunit J168_00932 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J168_00934 PF00361 Proton-conducting membrane transporter J168_00935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J168_00936 PF00361 Proton-conducting membrane transporter J168_00936 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J168_00936 PF13244 Domain of unknown function (DUF4040) J168_00936 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J168_00939 PF01483 Proprotein convertase P-domain J168_00939 PF07504 Fungalysin/Thermolysin Propeptide Motif J168_00939 PF01447 Thermolysin metallopeptidase, catalytic domain J168_00939 PF02868 Thermolysin metallopeptidase, alpha-helical domain J168_00941 PF00182 Chitinase class I J168_00945 PF01259 SAICAR synthetase J168_00946 PF05099 Tellurite resistance protein TerB J168_00946 PF00226 DnaJ domain J168_00948 PF00834 Ribulose-phosphate 3 epimerase family J168_00950 PF00781 Diacylglycerol kinase catalytic domain J168_00951 PF04715 Anthranilate synthase component I, N terminal region J168_00951 PF00425 chorismate binding enzyme J168_00953 PF00117 Glutamine amidotransferase class-I J168_00955 PF00591 Glycosyl transferase family, a/b domain J168_00955 PF02885 Glycosyl transferase family, helical bundle domain J168_00956 PF00218 Indole-3-glycerol phosphate synthase J168_00958 PF00325 Bacterial regulatory proteins, crp family J168_00958 PF00027 Cyclic nucleotide-binding domain J168_00959 PF02675 S-adenosylmethionine decarboxylase J168_00960 PF00893 Small Multidrug Resistance protein J168_00961 PF03232 Ubiquinone biosynthesis protein COQ7 J168_00962 PF00572 Ribosomal protein L13 J168_00963 PF00380 Ribosomal protein S9/S16 J168_00966 PF00293 NUDIX domain J168_00967 PF00210 Ferritin-like domain J168_00968 PF00672 HAMP domain J168_00968 PF00512 His Kinase A (phospho-acceptor) domain J168_00968 PF01627 Hpt domain J168_00968 PF00072 Response regulator receiver domain J168_00968 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J168_00968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_00969 PF00486 Transcriptional regulatory protein, C terminal J168_00969 PF00072 Response regulator receiver domain J168_00973 PF01521 Iron-sulphur cluster biosynthesis J168_00975 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J168_00975 PF00293 NUDIX domain J168_00975 PF09297 NADH pyrophosphatase zinc ribbon domain J168_00976 PF17113 Regulatory signalling modulator protein AmpE J168_00976 PF03186 CobD/Cbib protein J168_00979 PF07690 Major Facilitator Superfamily J168_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_00980 PF03466 LysR substrate binding domain J168_00981 PF07690 Major Facilitator Superfamily J168_00982 PF12805 FUSC-like inner membrane protein yccS J168_00983 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J168_00983 PF02843 Phosphoribosylglycinamide synthetase, C domain J168_00983 PF02844 Phosphoribosylglycinamide synthetase, N domain J168_00985 PF01808 AICARFT/IMPCHase bienzyme J168_00985 PF02142 MGS-like domain J168_00986 PF01066 CDP-alcohol phosphatidyltransferase J168_00987 PF12146 Serine aminopeptidase, S33 J168_00987 PF12147 Putative methyltransferase J168_00988 PF00782 Dual specificity phosphatase, catalytic domain J168_00994 PF02954 Bacterial regulatory protein, Fis family J168_00997 PF01381 Helix-turn-helix J168_01003 PF02785 Biotin carboxylase C-terminal domain J168_01003 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J168_01003 PF00289 Biotin carboxylase, N-terminal domain J168_01005 PF00364 Biotin-requiring enzyme J168_01006 PF01220 Dehydroquinase class II J168_01007 PF02683 Cytochrome C biogenesis protein transmembrane region J168_01007 PF11412 Disulphide bond corrector protein DsbC J168_01008 PF03091 CutA1 divalent ion tolerance protein J168_01011 PF01852 START domain J168_01013 PF00106 short chain dehydrogenase J168_01014 PF04231 Endonuclease I J168_01015 PF00166 Chaperonin 10 Kd subunit J168_01016 PF00118 TCP-1/cpn60 chaperonin family J168_01018 PF07715 TonB-dependent Receptor Plug Domain J168_01018 PF00593 TonB dependent receptor J168_01019 PF00793 DAHP synthetase I family J168_01022 PF08450 SMP-30/Gluconolactonase/LRE-like region J168_01024 PF03710 Glutamate-ammonia ligase adenylyltransferase J168_01024 PF08335 GlnD PII-uridylyltransferase J168_01025 PF02592 Putative vitamin uptake transporter J168_01028 PF00881 Nitroreductase family J168_01029 PF04264 YceI-like domain J168_01033 PF16957 Malonate decarboxylase, alpha subunit, transporter J168_01034 PF06857 Malonate decarboxylase delta subunit (MdcD) J168_01035 PF01039 Carboxyl transferase domain J168_01037 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J168_01038 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J168_01040 PF00698 Acyl transferase domain J168_01042 PF07729 FCD domain J168_01042 PF00392 Bacterial regulatory proteins, gntR family J168_01043 PF13419 Haloacid dehalogenase-like hydrolase J168_01049 PF07745 Glycosyl hydrolase family 53 J168_01050 PF17831 Pyruvate dehydrogenase E1 component middle domain J168_01050 PF00456 Transketolase, thiamine diphosphate binding domain J168_01051 PF13276 HTH-like domain J168_01051 PF00665 Integrase core domain J168_01051 PF13333 Integrase core domain J168_01052 PF01527 Transposase J168_01053 PF00106 short chain dehydrogenase J168_01056 PF00106 short chain dehydrogenase J168_01058 PF13409 Glutathione S-transferase, N-terminal domain J168_01064 PF01527 Transposase J168_01065 PF13333 Integrase core domain J168_01065 PF00665 Integrase core domain J168_01065 PF13276 HTH-like domain J168_01067 PF11838 ERAP1-like C-terminal domain J168_01067 PF01433 Peptidase family M1 domain J168_01069 PF08032 RNA 2'-O ribose methyltransferase substrate binding J168_01069 PF00588 SpoU rRNA Methylase family J168_01070 PF00135 Carboxylesterase family J168_01072 PF10566 Glycoside hydrolase 97 J168_01072 PF14508 Glycosyl-hydrolase 97 N-terminal J168_01072 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J168_01073 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J168_01073 PF02837 Glycosyl hydrolases family 2, sugar binding domain J168_01073 PF00703 Glycosyl hydrolases family 2 J168_01075 PF00356 Bacterial regulatory proteins, lacI family J168_01077 PF01741 Large-conductance mechanosensitive channel, MscL J168_01078 PF01557 Fumarylacetoacetate (FAA) hydrolase family J168_01081 PF02080 TrkA-C domain J168_01081 PF03600 Citrate transporter J168_01082 PF02390 Putative methyltransferase J168_01083 PF05690 Thiazole biosynthesis protein ThiG J168_01085 PF03797 Autotransporter beta-domain J168_01085 PF00657 GDSL-like Lipase/Acylhydrolase J168_01090 PF05593 RHS Repeat J168_01090 PF03527 RHS protein J168_01096 PF05973 Phage derived protein Gp49-like (DUF891) J168_01104 PF04002 RadC-like JAB domain J168_01110 PF01555 DNA methylase J168_01115 PF02796 Helix-turn-helix domain of resolvase J168_01115 PF00665 Integrase core domain J168_01116 PF01695 IstB-like ATP binding protein J168_01126 PF00128 Alpha amylase, catalytic domain J168_01126 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J168_01127 PF08443 RimK-like ATP-grasp domain J168_01127 PF18030 RimK PreATP-grasp domain J168_01128 PF08443 RimK-like ATP-grasp domain J168_01128 PF18030 RimK PreATP-grasp domain J168_01130 PF00072 Response regulator receiver domain J168_01130 PF00486 Transcriptional regulatory protein, C terminal J168_01131 PF16736 Single Cache-like J168_01131 PF00989 PAS fold J168_01131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01131 PF00512 His Kinase A (phospho-acceptor) domain J168_01132 PF00665 Integrase core domain J168_01132 PF13276 HTH-like domain J168_01132 PF13333 Integrase core domain J168_01133 PF01527 Transposase J168_01136 PF01121 Dephospho-CoA kinase J168_01137 PF06750 Bacterial Peptidase A24 N-terminal domain J168_01137 PF01478 Type IV leader peptidase family J168_01138 PF00482 Type II secretion system (T2SS), protein F J168_01139 PF07963 Prokaryotic N-terminal methylation motif J168_01139 PF00114 Pilin (bacterial filament) J168_01140 PF07963 Prokaryotic N-terminal methylation motif J168_01140 PF00114 Pilin (bacterial filament) J168_01141 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J168_01141 PF00437 Type II/IV secretion system protein J168_01142 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J168_01142 PF00437 Type II/IV secretion system protein J168_01144 PF00158 Sigma-54 interaction domain J168_01144 PF00072 Response regulator receiver domain J168_01144 PF02954 Bacterial regulatory protein, Fis family J168_01145 PF00512 His Kinase A (phospho-acceptor) domain J168_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01146 PF00549 CoA-ligase J168_01146 PF08442 ATP-grasp domain J168_01147 PF02629 CoA binding domain J168_01147 PF00549 CoA-ligase J168_01152 PF01129 NAD:arginine ADP-ribosyltransferase J168_01154 PF02796 Helix-turn-helix domain of resolvase J168_01154 PF00665 Integrase core domain J168_01165 PF01527 Transposase J168_01166 PF13333 Integrase core domain J168_01166 PF00665 Integrase core domain J168_01166 PF13276 HTH-like domain J168_01202 PF00072 Response regulator receiver domain J168_01202 PF02954 Bacterial regulatory protein, Fis family J168_01202 PF00158 Sigma-54 interaction domain J168_01203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01203 PF13426 PAS domain J168_01203 PF00072 Response regulator receiver domain J168_01218 PF01695 IstB-like ATP binding protein J168_01220 PF00817 impB/mucB/samB family J168_01220 PF11799 impB/mucB/samB family C-terminal domain J168_01220 PF13438 Domain of unknown function (DUF4113) J168_01220 PF11798 IMS family HHH motif J168_01221 PF00717 Peptidase S24-like J168_01222 PF00072 Response regulator receiver domain J168_01222 PF01339 CheB methylesterase J168_01223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01223 PF00989 PAS fold J168_01223 PF00512 His Kinase A (phospho-acceptor) domain J168_01226 PF05697 Bacterial trigger factor protein (TF) J168_01226 PF05698 Bacterial trigger factor protein (TF) C-terminus J168_01227 PF00574 Clp protease J168_01228 PF07724 AAA domain (Cdc48 subfamily) J168_01228 PF10431 C-terminal, D2-small domain, of ClpB protein J168_01228 PF06689 ClpX C4-type zinc finger J168_01229 PF02190 ATP-dependent protease La (LON) substrate-binding domain J168_01229 PF00004 ATPase family associated with various cellular activities (AAA) J168_01229 PF05362 Lon protease (S16) C-terminal proteolytic domain J168_01230 PF00216 Bacterial DNA-binding protein J168_01236 PF05257 CHAP domain J168_01236 PF01476 LysM domain J168_01237 PF00753 Metallo-beta-lactamase superfamily J168_01237 PF16123 Hydroxyacylglutathione hydrolase C-terminus J168_01239 PF00075 RNase H J168_01240 PF00929 Exonuclease J168_01244 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J168_01246 PF12706 Beta-lactamase superfamily domain J168_01246 PF00753 Metallo-beta-lactamase superfamily J168_01247 PF06463 Molybdenum Cofactor Synthesis C J168_01247 PF04055 Radical SAM superfamily J168_01248 PF01967 MoaC family J168_01249 PF02597 ThiS family J168_01250 PF02391 MoaE protein J168_01253 PF01527 Transposase J168_01254 PF13276 HTH-like domain J168_01254 PF00665 Integrase core domain J168_01254 PF13333 Integrase core domain J168_01260 PF12170 DNA polymerase III tau subunit V interacting with alpha J168_01260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J168_01260 PF12169 DNA polymerase III subunits gamma and tau domain III J168_01261 PF02575 YbaB/EbfC DNA-binding family J168_01262 PF13662 Toprim domain J168_01262 PF02132 RecR protein J168_01263 PF01230 HIT domain J168_01265 PF01841 Transglutaminase-like superfamily J168_01265 PF13559 Domain of unknown function (DUF4129) J168_01265 PF11992 Domain of unknown function (DUF3488) J168_01267 PF07726 ATPase family associated with various cellular activities (AAA) J168_01267 PF17863 AAA lid domain J168_01272 PF02545 Maf-like protein J168_01273 PF02620 Large ribosomal RNA subunit accumulation protein YceD J168_01274 PF01783 Ribosomal L32p protein family J168_01275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J168_01275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J168_01277 PF00698 Acyl transferase domain J168_01279 PF00550 Phosphopantetheine attachment site J168_01280 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_01280 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_01281 PF00425 chorismate binding enzyme J168_01281 PF04715 Anthranilate synthase component I, N terminal region J168_01282 PF02618 YceG-like family J168_01283 PF09115 DNA polymerase III, delta subunit, C terminal J168_01287 PF06506 Propionate catabolism activator J168_01287 PF02954 Bacterial regulatory protein, Fis family J168_01287 PF00158 Sigma-54 interaction domain J168_01289 PF00285 Citrate synthase, C-terminal domain J168_01290 PF00330 Aconitase family (aconitate hydratase) J168_01290 PF00694 Aconitase C-terminal domain J168_01291 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J168_01293 PF04303 PrpF protein J168_01294 PF07715 TonB-dependent Receptor Plug Domain J168_01294 PF00593 TonB dependent receptor J168_01296 PF17962 Bacterial macroglobulin domain 6 J168_01296 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J168_01296 PF01835 MG2 domain J168_01296 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J168_01296 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J168_01296 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J168_01296 PF07703 Alpha-2-macroglobulin bait region domain J168_01296 PF00207 Alpha-2-macroglobulin family J168_01299 PF06832 Penicillin-Binding Protein C-terminus Family J168_01299 PF00912 Transglycosylase J168_01299 PF00905 Penicillin binding protein transpeptidase domain J168_01301 PF08534 Redoxin J168_01303 PF00226 DnaJ domain J168_01303 PF01556 DnaJ C terminal domain J168_01305 PF00072 Response regulator receiver domain J168_01307 PF12221 Bacterial membrane protein N terminal J168_01307 PF01145 SPFH domain / Band 7 family J168_01308 PF01145 SPFH domain / Band 7 family J168_01311 PF00709 Adenylosuccinate synthetase J168_01312 PF01433 Peptidase family M1 domain J168_01312 PF11838 ERAP1-like C-terminal domain J168_01315 PF00440 Bacterial regulatory proteins, tetR family J168_01328 PF13456 Reverse transcriptase-like J168_01328 PF00300 Histidine phosphatase superfamily (branch 1) J168_01329 PF01256 Carbohydrate kinase J168_01331 PF00723 Glycosyl hydrolases family 15 J168_01333 PF17678 Glycosyl hydrolase family 92 N-terminal domain J168_01333 PF07971 Glycosyl hydrolase family 92 J168_01337 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_01341 PF17755 UvrA DNA-binding domain J168_01342 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J168_01342 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J168_01343 PF03450 CO dehydrogenase flavoprotein C-terminal domain J168_01343 PF00941 FAD binding domain in molybdopterin dehydrogenase J168_01344 PF01799 [2Fe-2S] binding domain J168_01344 PF00111 2Fe-2S iron-sulfur cluster binding domain J168_01351 PF01726 LexA DNA binding domain J168_01351 PF00717 Peptidase S24-like J168_01354 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J168_01354 PF02811 PHP domain J168_01354 PF14579 Helix-hairpin-helix motif J168_01354 PF07733 Bacterial DNA polymerase III alpha NTPase domain J168_01355 PF00326 Prolyl oligopeptidase family J168_01357 PF03169 OPT oligopeptide transporter protein J168_01360 PF00326 Prolyl oligopeptidase family J168_01360 PF07676 WD40-like Beta Propeller Repeat J168_01360 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J168_01363 PF12833 Helix-turn-helix domain J168_01363 PF02311 AraC-like ligand binding domain J168_01368 PF03461 TRCF domain J168_01368 PF00271 Helicase conserved C-terminal domain J168_01368 PF00270 DEAD/DEAH box helicase J168_01368 PF02559 CarD-like/TRCF domain J168_01368 PF17757 UvrB interaction domain J168_01370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J168_01371 PF00072 Response regulator receiver domain J168_01371 PF00486 Transcriptional regulatory protein, C terminal J168_01372 PF00672 HAMP domain J168_01372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01372 PF00512 His Kinase A (phospho-acceptor) domain J168_01374 PF06123 Inner membrane protein CreD J168_01379 PF00749 tRNA synthetases class I (E and Q), catalytic domain J168_01380 PF01475 Ferric uptake regulator family J168_01382 PF00529 HlyD membrane-fusion protein of T1SS J168_01382 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_01383 PF00873 AcrB/AcrD/AcrF family J168_01384 PF02321 Outer membrane efflux protein J168_01385 PF16859 Tetracyclin repressor-like, C-terminal domain J168_01385 PF00440 Bacterial regulatory proteins, tetR family J168_01387 PF06719 AraC-type transcriptional regulator N-terminus J168_01387 PF12833 Helix-turn-helix domain J168_01389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01389 PF03466 LysR substrate binding domain J168_01390 PF07690 Major Facilitator Superfamily J168_01391 PF00248 Aldo/keto reductase family J168_01393 PF00082 Subtilase family J168_01393 PF01483 Proprotein convertase P-domain J168_01395 PF01483 Proprotein convertase P-domain J168_01395 PF00082 Subtilase family J168_01397 PF00593 TonB dependent receptor J168_01397 PF07715 TonB-dependent Receptor Plug Domain J168_01400 PF00107 Zinc-binding dehydrogenase J168_01400 PF08240 Alcohol dehydrogenase GroES-like domain J168_01401 PF00654 Voltage gated chloride channel J168_01403 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J168_01403 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J168_01413 PF00270 DEAD/DEAH box helicase J168_01413 PF00271 Helicase conserved C-terminal domain J168_01413 PF03880 DbpA RNA binding domain J168_01414 PF08448 PAS fold J168_01414 PF00990 Diguanylate cyclase, GGDEF domain J168_01414 PF00563 EAL domain J168_01415 PF00849 RNA pseudouridylate synthase J168_01415 PF01479 S4 domain J168_01416 PF00990 Diguanylate cyclase, GGDEF domain J168_01416 PF00072 Response regulator receiver domain J168_01419 PF03737 Aldolase/RraA J168_01420 PF00144 Beta-lactamase J168_01421 PF00999 Sodium/hydrogen exchanger family J168_01422 PF00672 HAMP domain J168_01422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01422 PF00512 His Kinase A (phospho-acceptor) domain J168_01423 PF00072 Response regulator receiver domain J168_01423 PF00486 Transcriptional regulatory protein, C terminal J168_01424 PF02321 Outer membrane efflux protein J168_01427 PF00873 AcrB/AcrD/AcrF family J168_01430 PF00664 ABC transporter transmembrane region J168_01430 PF00005 ABC transporter J168_01436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01436 PF03466 LysR substrate binding domain J168_01438 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J168_01439 PF04070 Domain of unknown function (DUF378) J168_01444 PF00085 Thioredoxin J168_01446 PF13603 Leucyl-tRNA synthetase, Domain 2 J168_01446 PF00133 tRNA synthetases class I (I, L, M and V) J168_01446 PF08264 Anticodon-binding domain of tRNA J168_01449 PF01467 Cytidylyltransferase-like J168_01452 PF02590 Predicted SPOUT methyltransferase J168_01455 PF04402 Protein of unknown function (DUF541) J168_01456 PF02545 Maf-like protein J168_01457 PF00575 S1 RNA binding domain J168_01457 PF10150 Ribonuclease E/G family J168_01458 PF13116 Protein of unknown function J168_01458 PF13502 AsmA-like C-terminal region J168_01460 PF01523 Putative modulator of DNA gyrase J168_01461 PF04751 Protein of unknown function (DUF615) J168_01462 PF01523 Putative modulator of DNA gyrase J168_01464 PF14521 Lysine-specific metallo-endopeptidase J168_01465 PF00348 Polyprenyl synthetase J168_01466 PF02609 Exonuclease VII small subunit J168_01467 PF09179 TilS substrate binding domain J168_01467 PF01171 PP-loop family J168_01467 PF11734 TilS substrate C-terminal domain J168_01468 PF00245 Alkaline phosphatase J168_01469 PF00375 Sodium:dicarboxylate symporter family J168_01472 PF00877 NlpC/P60 family J168_01473 PF00877 NlpC/P60 family J168_01474 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J168_01475 PF04235 Protein of unknown function (DUF418) J168_01476 PF01266 FAD dependent oxidoreductase J168_01477 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J168_01477 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_01478 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J168_01481 PF01431 Peptidase family M13 J168_01481 PF05649 Peptidase family M13 J168_01482 PF01431 Peptidase family M13 J168_01482 PF05649 Peptidase family M13 J168_01485 PF00593 TonB dependent receptor J168_01485 PF07715 TonB-dependent Receptor Plug Domain J168_01486 PF10609 NUBPL iron-transfer P-loop NTPase J168_01487 PF00692 dUTPase J168_01491 PF01738 Dienelactone hydrolase family J168_01492 PF04055 Radical SAM superfamily J168_01492 PF18693 TRAM domain J168_01492 PF00919 Uncharacterized protein family UPF0004 J168_01493 PF03449 Transcription elongation factor, N-terminal J168_01493 PF01272 Transcription elongation factor, GreA/GreB, C-term J168_01496 PF00293 NUDIX domain J168_01497 PF05872 Bacterial protein of unknown function (DUF853) J168_01499 PF02666 Phosphatidylserine decarboxylase J168_01500 PF02630 SCO1/SenC J168_01501 PF05175 Methyltransferase small domain J168_01502 PF01264 Chorismate synthase J168_01503 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J168_01503 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J168_01504 PF02774 Semialdehyde dehydrogenase, dimerisation domain J168_01504 PF01118 Semialdehyde dehydrogenase, NAD binding domain J168_01508 PF01416 tRNA pseudouridine synthase J168_01509 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J168_01510 PF03466 LysR substrate binding domain J168_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01511 PF00291 Pyridoxal-phosphate dependent enzyme J168_01513 PF00290 Tryptophan synthase alpha chain J168_01514 PF17848 Acetyl-coA carboxylase zinc finger domain J168_01514 PF01039 Carboxyl transferase domain J168_01515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J168_01515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J168_01515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J168_01515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J168_01518 PF03707 Bacterial signalling protein N terminal repeat J168_01518 PF00563 EAL domain J168_01518 PF00990 Diguanylate cyclase, GGDEF domain J168_01521 PF00106 short chain dehydrogenase J168_01522 PF00121 Triosephosphate isomerase J168_01525 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J168_01526 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J168_01527 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J168_01528 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J168_01530 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J168_01530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J168_01530 PF10531 SLBB domain J168_01531 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J168_01531 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J168_01531 PF00384 Molybdopterin oxidoreductase J168_01532 PF00146 NADH dehydrogenase J168_01533 PF12838 4Fe-4S dicluster domain J168_01534 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J168_01535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J168_01536 PF00361 Proton-conducting membrane transporter J168_01536 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J168_01537 PF00361 Proton-conducting membrane transporter J168_01537 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J168_01538 PF00361 Proton-conducting membrane transporter J168_01540 PF17384 RimP C-terminal SH3 domain J168_01540 PF02576 RimP N-terminal domain J168_01541 PF13184 NusA-like KH domain J168_01541 PF08529 NusA N-terminal domain J168_01541 PF00575 S1 RNA binding domain J168_01542 PF11987 Translation-initiation factor 2 J168_01542 PF08364 Bacterial translation initiation factor IF-2 associated region J168_01542 PF04760 Translation initiation factor IF-2, N-terminal region J168_01542 PF00009 Elongation factor Tu GTP binding domain J168_01543 PF02033 Ribosome-binding factor A J168_01544 PF09157 Pseudouridine synthase II TruB, C-terminal J168_01544 PF16198 tRNA pseudouridylate synthase B C-terminal domain J168_01544 PF01509 TruB family pseudouridylate synthase (N terminal domain) J168_01545 PF00312 Ribosomal protein S15 J168_01546 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J168_01546 PF00013 KH domain J168_01546 PF03725 3' exoribonuclease family, domain 2 J168_01546 PF00575 S1 RNA binding domain J168_01546 PF01138 3' exoribonuclease family, domain 1 J168_01548 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J168_01548 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J168_01550 PF00731 AIR carboxylase J168_01551 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J168_01551 PF02222 ATP-grasp domain J168_01552 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J168_01552 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J168_01553 PF00462 Glutaredoxin J168_01555 PF01914 MarC family integral membrane protein J168_01556 PF00593 TonB dependent receptor J168_01557 PF03641 Possible lysine decarboxylase J168_01557 PF11892 Domain of unknown function (DUF3412) J168_01557 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J168_01558 PF06580 Histidine kinase J168_01558 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01558 PF07694 5TMR of 5TMR-LYT J168_01561 PF05567 Neisseria PilC beta-propeller domain J168_01562 PF00114 Pilin (bacterial filament) J168_01562 PF07963 Prokaryotic N-terminal methylation motif J168_01563 PF01527 Transposase J168_01564 PF13333 Integrase core domain J168_01564 PF00665 Integrase core domain J168_01564 PF13276 HTH-like domain J168_01570 PF04002 RadC-like JAB domain J168_01571 PF05284 Protein of unknown function (DUF736) J168_01572 PF01381 Helix-turn-helix J168_01573 PF01527 Transposase J168_01574 PF13333 Integrase core domain J168_01574 PF00665 Integrase core domain J168_01574 PF13276 HTH-like domain J168_01575 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J168_01576 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J168_01576 PF00361 Proton-conducting membrane transporter J168_01576 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J168_01577 PF03466 LysR substrate binding domain J168_01577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01580 PF00196 Bacterial regulatory proteins, luxR family J168_01580 PF00072 Response regulator receiver domain J168_01583 PF00857 Isochorismatase family J168_01585 PF07969 Amidohydrolase family J168_01586 PF05977 Transmembrane secretion effector J168_01589 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J168_01589 PF14824 Sirohaem biosynthesis protein central J168_01589 PF10414 Sirohaem synthase dimerisation region J168_01591 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J168_01593 PF05974 Domain of unknown function (DUF892) J168_01596 PF08447 PAS fold J168_01596 PF08448 PAS fold J168_01596 PF00990 Diguanylate cyclase, GGDEF domain J168_01596 PF00563 EAL domain J168_01597 PF12951 Passenger-associated-transport-repeat J168_01597 PF12951 Passenger-associated-transport-repeat J168_01598 PF00196 Bacterial regulatory proteins, luxR family J168_01598 PF00072 Response regulator receiver domain J168_01599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01599 PF00512 His Kinase A (phospho-acceptor) domain J168_01599 PF08448 PAS fold J168_01599 PF00072 Response regulator receiver domain J168_01599 PF13426 PAS domain J168_01601 PF00873 AcrB/AcrD/AcrF family J168_01602 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_01603 PF03797 Autotransporter beta-domain J168_01603 PF00082 Subtilase family J168_01605 PF06580 Histidine kinase J168_01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01605 PF07694 5TMR of 5TMR-LYT J168_01606 PF00072 Response regulator receiver domain J168_01606 PF04397 LytTr DNA-binding domain J168_01607 PF00144 Beta-lactamase J168_01609 PF07995 Glucose / Sorbosone dehydrogenase J168_01610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J168_01612 PF09335 SNARE associated Golgi protein J168_01613 PF01494 FAD binding domain J168_01614 PF01527 Transposase J168_01615 PF13276 HTH-like domain J168_01615 PF00665 Integrase core domain J168_01615 PF13333 Integrase core domain J168_01625 PF17091 Inovirus G7P protein J168_01631 PF00106 short chain dehydrogenase J168_01633 PF08241 Methyltransferase domain J168_01633 PF12697 Alpha/beta hydrolase family J168_01642 PF01106 NifU-like domain J168_01643 PF01329 Pterin 4 alpha carbinolamine dehydratase J168_01645 PF02535 ZIP Zinc transporter J168_01646 PF11737 Protein of unknown function (DUF3300) J168_01647 PF01479 S4 domain J168_01647 PF00849 RNA pseudouridylate synthase J168_01648 PF00575 S1 RNA binding domain J168_01648 PF10150 Ribonuclease E/G family J168_01648 PF12111 Polyribonucleotide phosphorylase C terminal J168_01649 PF00072 Response regulator receiver domain J168_01649 PF00196 Bacterial regulatory proteins, luxR family J168_01652 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J168_01654 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J168_01654 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J168_01654 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J168_01656 PF00589 Phage integrase family J168_01657 PF01527 Transposase J168_01658 PF13333 Integrase core domain J168_01658 PF00665 Integrase core domain J168_01658 PF13276 HTH-like domain J168_01659 PF01527 Transposase J168_01661 PF00501 AMP-binding enzyme J168_01661 PF00975 Thioesterase domain J168_01661 PF00550 Phosphopantetheine attachment site J168_01661 PF13193 AMP-binding enzyme C-terminal domain J168_01661 PF00668 Condensation domain J168_01662 PF13193 AMP-binding enzyme C-terminal domain J168_01662 PF00668 Condensation domain J168_01662 PF00550 Phosphopantetheine attachment site J168_01662 PF00501 AMP-binding enzyme J168_01665 PF01609 Transposase DDE domain J168_01665 PF05598 Transposase domain (DUF772) J168_01670 PF01609 Transposase DDE domain J168_01670 PF05598 Transposase domain (DUF772) J168_01671 PF00665 Integrase core domain J168_01671 PF02796 Helix-turn-helix domain of resolvase J168_01672 PF01695 IstB-like ATP binding protein J168_01673 PF05598 Transposase domain (DUF772) J168_01673 PF01609 Transposase DDE domain J168_01679 PF12137 RNA polymerase recycling family C-terminal J168_01679 PF00176 SNF2 family N-terminal domain J168_01679 PF00271 Helicase conserved C-terminal domain J168_01679 PF18339 RapA N-terminal Tudor like domain 1 J168_01679 PF18337 RapA N-terminal Tudor like domain J168_01680 PF01695 IstB-like ATP binding protein J168_01681 PF00665 Integrase core domain J168_01681 PF02796 Helix-turn-helix domain of resolvase J168_01682 PF00271 Helicase conserved C-terminal domain J168_01682 PF12137 RNA polymerase recycling family C-terminal J168_01682 PF00176 SNF2 family N-terminal domain J168_01682 PF18339 RapA N-terminal Tudor like domain 1 J168_01682 PF18337 RapA N-terminal Tudor like domain J168_01683 PF00145 C-5 cytosine-specific DNA methylase J168_01685 PF01695 IstB-like ATP binding protein J168_01686 PF02796 Helix-turn-helix domain of resolvase J168_01686 PF00665 Integrase core domain J168_01688 PF13614 AAA domain J168_01695 PF00436 Single-strand binding protein family J168_01696 PF01131 DNA topoisomerase J168_01696 PF01751 Toprim domain J168_01697 PF00145 C-5 cytosine-specific DNA methylase J168_01701 PF02021 Uncharacterised protein family UPF0102 J168_01709 PF13936 Helix-turn-helix domain J168_01709 PF00665 Integrase core domain J168_01737 PF04002 RadC-like JAB domain J168_01748 PF13340 Putative transposase of IS4/5 family (DUF4096) J168_01752 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J168_01757 PF13340 Putative transposase of IS4/5 family (DUF4096) J168_01759 PF05598 Transposase domain (DUF772) J168_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01760 PF03466 LysR substrate binding domain J168_01761 PF01381 Helix-turn-helix J168_01764 PF01695 IstB-like ATP binding protein J168_01765 PF02796 Helix-turn-helix domain of resolvase J168_01765 PF00665 Integrase core domain J168_01766 PF00589 Phage integrase family J168_01766 PF13356 Arm DNA-binding domain J168_01768 PF01066 CDP-alcohol phosphatidyltransferase J168_01769 PF01541 GIY-YIG catalytic domain J168_01769 PF02151 UvrB/uvrC motif J168_01769 PF08459 UvrC Helix-hairpin-helix N-terminal J168_01771 PF01451 Low molecular weight phosphotyrosine protein phosphatase J168_01772 PF02348 Cytidylyltransferase J168_01773 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J168_01774 PF00664 ABC transporter transmembrane region J168_01774 PF00005 ABC transporter J168_01776 PF01618 MotA/TolQ/ExbB proton channel family J168_01777 PF03772 Competence protein J168_01777 PF00753 Metallo-beta-lactamase superfamily J168_01779 PF00005 ABC transporter J168_01780 PF02687 FtsX-like permease family J168_01780 PF12704 MacB-like periplasmic core domain J168_01782 PF03937 Flavinator of succinate dehydrogenase J168_01783 PF13085 2Fe-2S iron-sulfur cluster binding domain J168_01785 PF02910 Fumarate reductase flavoprotein C-term J168_01785 PF00890 FAD binding domain J168_01786 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J168_01787 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J168_01790 PF00005 ABC transporter J168_01790 PF17912 MalK OB fold domain J168_01791 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J168_01791 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J168_01792 PF02685 Glucokinase J168_01793 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J168_01794 PF00920 Dehydratase family J168_01795 PF01081 KDPG and KHG aldolase J168_01796 PF00873 AcrB/AcrD/AcrF family J168_01797 PF00873 AcrB/AcrD/AcrF family J168_01798 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_01800 PF00034 Cytochrome c J168_01808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01808 PF09308 LuxQ, periplasmic J168_01808 PF00072 Response regulator receiver domain J168_01808 PF00512 His Kinase A (phospho-acceptor) domain J168_01809 PF09371 Tex-like protein N-terminal domain J168_01809 PF16921 Tex protein YqgF-like domain J168_01809 PF00575 S1 RNA binding domain J168_01809 PF17674 HHH domain J168_01811 PF00355 Rieske [2Fe-2S] domain J168_01811 PF01266 FAD dependent oxidoreductase J168_01814 PF00561 alpha/beta hydrolase fold J168_01816 PF01066 CDP-alcohol phosphatidyltransferase J168_01820 PF03618 Kinase/pyrophosphorylase J168_01821 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J168_01821 PF00391 PEP-utilising enzyme, mobile domain J168_01821 PF02896 PEP-utilising enzyme, TIM barrel domain J168_01822 PF00924 Mechanosensitive ion channel J168_01822 PF05552 Conserved TM helix J168_01823 PF00929 Exonuclease J168_01824 PF14437 MafB19-like deaminase J168_01825 PF01325 Iron dependent repressor, N-terminal DNA binding domain J168_01825 PF02742 Iron dependent repressor, metal binding and dimerisation domain J168_01826 PF01566 Natural resistance-associated macrophage protein J168_01827 PF00561 alpha/beta hydrolase fold J168_01829 PF12804 MobA-like NTP transferase domain J168_01830 PF03453 MoeA N-terminal region (domain I and II) J168_01830 PF03454 MoeA C-terminal region (domain IV) J168_01830 PF00994 Probable molybdopterin binding domain J168_01832 PF03372 Endonuclease/Exonuclease/phosphatase family J168_01834 PF13823 Alcohol dehydrogenase GroES-associated J168_01834 PF08240 Alcohol dehydrogenase GroES-like domain J168_01834 PF00107 Zinc-binding dehydrogenase J168_01839 PF00899 ThiF family J168_01840 PF00994 Probable molybdopterin binding domain J168_01840 PF03454 MoeA C-terminal region (domain IV) J168_01840 PF03453 MoeA N-terminal region (domain I and II) J168_01841 PF01926 50S ribosome-binding GTPase J168_01841 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J168_01842 PF13360 PQQ-like domain J168_01842 PF01011 PQQ enzyme repeat J168_01844 PF13464 Domain of unknown function (DUF4115) J168_01846 PF04055 Radical SAM superfamily J168_01847 PF00334 Nucleoside diphosphate kinase J168_01849 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J168_01849 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J168_01849 PF00378 Enoyl-CoA hydratase/isomerase J168_01850 PF02803 Thiolase, C-terminal domain J168_01850 PF00108 Thiolase, N-terminal domain J168_01852 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J168_01854 PF12002 MgsA AAA+ ATPase C terminal J168_01854 PF00004 ATPase family associated with various cellular activities (AAA) J168_01854 PF16193 AAA C-terminal domain J168_01856 PF03548 Outer membrane lipoprotein carrier protein LolA J168_01858 PF17854 FtsK alpha domain J168_01858 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J168_01858 PF01580 FtsK/SpoIIIE family J168_01858 PF09397 Ftsk gamma domain J168_01859 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_01861 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J168_01862 PF01176 Translation initiation factor 1A / IF-1 J168_01863 PF00004 ATPase family associated with various cellular activities (AAA) J168_01863 PF07724 AAA domain (Cdc48 subfamily) J168_01863 PF17871 AAA lid domain J168_01863 PF02861 Clp amino terminal domain, pathogenicity island component J168_01863 PF10431 C-terminal, D2-small domain, of ClpB protein J168_01864 PF02617 ATP-dependent Clp protease adaptor protein ClpS J168_01865 PF00293 NUDIX domain J168_01867 PF04356 Protein of unknown function (DUF489) J168_01868 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_01868 PF12729 Four helix bundle sensory module for signal transduction J168_01868 PF00672 HAMP domain J168_01870 PF03707 Bacterial signalling protein N terminal repeat J168_01870 PF00990 Diguanylate cyclase, GGDEF domain J168_01870 PF00563 EAL domain J168_01871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01871 PF07730 Histidine kinase J168_01872 PF03707 Bacterial signalling protein N terminal repeat J168_01872 PF00990 Diguanylate cyclase, GGDEF domain J168_01872 PF00563 EAL domain J168_01873 PF13426 PAS domain J168_01873 PF00512 His Kinase A (phospho-acceptor) domain J168_01873 PF00989 PAS fold J168_01873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01873 PF13188 PAS domain J168_01877 PF00072 Response regulator receiver domain J168_01877 PF01584 CheW-like domain J168_01879 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J168_01879 PF00460 Flagella basal body rod protein J168_01880 PF03963 Flagellar hook capping protein - N-terminal region J168_01881 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J168_01881 PF00460 Flagella basal body rod protein J168_01881 PF07559 Flagellar basal body protein FlaE J168_01882 PF00460 Flagella basal body rod protein J168_01882 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J168_01883 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J168_01883 PF00460 Flagella basal body rod protein J168_01884 PF02107 Flagellar L-ring protein J168_01885 PF02119 Flagellar P-ring protein J168_01886 PF10135 Rod binding protein J168_01886 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J168_01887 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J168_01887 PF07196 Flagellin hook IN motif J168_01888 PF00700 Bacterial flagellin C-terminal helical region J168_01888 PF00669 Bacterial flagellin N-terminal helical region J168_01889 PF00700 Bacterial flagellin C-terminal helical region J168_01889 PF00669 Bacterial flagellin N-terminal helical region J168_01890 PF07195 Flagellar hook-associated protein 2 C-terminus J168_01890 PF07196 Flagellin hook IN motif J168_01890 PF02465 Flagellar hook-associated protein 2 N-terminus J168_01891 PF02561 Flagellar protein FliS J168_01894 PF00196 Bacterial regulatory proteins, luxR family J168_01894 PF00072 Response regulator receiver domain J168_01895 PF04552 Sigma-54, DNA binding domain J168_01895 PF04963 Sigma-54 factor, core binding domain J168_01895 PF00309 Sigma-54 factor, Activator interacting domain (AID) J168_01896 PF00072 Response regulator receiver domain J168_01896 PF01339 CheB methylesterase J168_01897 PF00072 Response regulator receiver domain J168_01897 PF00158 Sigma-54 interaction domain J168_01897 PF02954 Bacterial regulatory protein, Fis family J168_01898 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J168_01900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J168_01900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J168_01908 PF00535 Glycosyl transferase family 2 J168_01908 PF00534 Glycosyl transferases group 1 J168_01909 PF02049 Flagellar hook-basal body complex protein FliE J168_01910 PF08345 Flagellar M-ring protein C-terminal J168_01910 PF01514 Secretory protein of YscJ/FliF family J168_01911 PF01706 FliG C-terminal domain J168_01911 PF14841 FliG middle domain J168_01911 PF14842 FliG N-terminal domain J168_01913 PF18269 T3SS EscN ATPase C-terminal domain J168_01913 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J168_01917 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J168_01917 PF02154 Flagellar motor switch protein FliM J168_01918 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J168_01919 PF04347 Flagellar biosynthesis protein, FliO J168_01920 PF00813 FliP family J168_01923 PF01313 Bacterial export proteins, family 3 J168_01924 PF01311 Bacterial export proteins, family 1 J168_01925 PF00563 EAL domain J168_01925 PF03707 Bacterial signalling protein N terminal repeat J168_01925 PF13188 PAS domain J168_01925 PF00990 Diguanylate cyclase, GGDEF domain J168_01926 PF00990 Diguanylate cyclase, GGDEF domain J168_01926 PF00563 EAL domain J168_01926 PF03707 Bacterial signalling protein N terminal repeat J168_01926 PF13188 PAS domain J168_01927 PF00563 EAL domain J168_01927 PF03707 Bacterial signalling protein N terminal repeat J168_01927 PF00990 Diguanylate cyclase, GGDEF domain J168_01928 PF01312 FlhB HrpN YscU SpaS Family J168_01929 PF00771 FHIPEP family J168_01930 PF00448 SRP54-type protein, GTPase domain J168_01931 PF10609 NUBPL iron-transfer P-loop NTPase J168_01932 PF04545 Sigma-70, region 4 J168_01932 PF04539 Sigma-70 region 3 J168_01932 PF04542 Sigma-70 region 2 J168_01933 PF00072 Response regulator receiver domain J168_01934 PF04344 Chemotaxis phosphatase, CheZ J168_01935 PF02895 Signal transducing histidine kinase, homodimeric domain J168_01935 PF01584 CheW-like domain J168_01935 PF01627 Hpt domain J168_01935 PF07194 P2 response regulator binding domain J168_01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_01937 PF04055 Radical SAM superfamily J168_01937 PF13186 Iron-sulfur cluster-binding domain J168_01942 PF01527 Transposase J168_01943 PF13333 Integrase core domain J168_01943 PF13276 HTH-like domain J168_01943 PF00665 Integrase core domain J168_01946 PF00665 Integrase core domain J168_01946 PF02796 Helix-turn-helix domain of resolvase J168_01947 PF01695 IstB-like ATP binding protein J168_01952 PF13361 UvrD-like helicase C-terminal domain J168_01952 PF00580 UvrD/REP helicase N-terminal domain J168_01952 PF12462 DNA helicase IV / RNA helicase N terminal J168_01967 PF03466 LysR substrate binding domain J168_01967 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_01968 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J168_01968 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J168_01969 PF03401 Tripartite tricarboxylate transporter family receptor J168_01973 PF04002 RadC-like JAB domain J168_01980 PF13356 Arm DNA-binding domain J168_01980 PF00589 Phage integrase family J168_01981 PF00117 Glutamine amidotransferase class-I J168_01981 PF00958 GMP synthase C terminal domain J168_01981 PF02540 NAD synthase J168_01982 PF00571 CBS domain J168_01982 PF00478 IMP dehydrogenase / GMP reductase domain J168_01983 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J168_01983 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J168_01985 PF00999 Sodium/hydrogen exchanger family J168_01985 PF02254 TrkA-N domain J168_01986 PF00483 Nucleotidyl transferase J168_01987 PF02719 Polysaccharide biosynthesis protein J168_01988 PF00953 Glycosyl transferase family 4 J168_01989 PF18073 Rubredoxin metal binding domain J168_01991 PF00216 Bacterial DNA-binding protein J168_01992 PF00575 S1 RNA binding domain J168_01993 PF02224 Cytidylate kinase J168_01994 PF00444 Ribosomal protein L36 J168_01997 PF04371 Porphyromonas-type peptidyl-arginine deiminase J168_01998 PF00795 Carbon-nitrogen hydrolase J168_02003 PF00528 Binding-protein-dependent transport system inner membrane component J168_02004 PF00528 Binding-protein-dependent transport system inner membrane component J168_02008 PF00356 Bacterial regulatory proteins, lacI family J168_02010 PF03795 YCII-related domain J168_02011 PF02616 Segregation and condensation protein ScpA J168_02012 PF04079 Segregation and condensation complex subunit ScpB J168_02013 PF00849 RNA pseudouridylate synthase J168_02013 PF01479 S4 domain J168_02016 PF00795 Carbon-nitrogen hydrolase J168_02017 PF00155 Aminotransferase class I and II J168_02018 PF00005 ABC transporter J168_02019 PF03379 CcmB protein J168_02020 PF01578 Cytochrome C assembly protein J168_02022 PF03100 CcmE J168_02023 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J168_02023 PF01578 Cytochrome C assembly protein J168_02024 PF08534 Redoxin J168_02025 PF03918 Cytochrome C biogenesis protein J168_02027 PF00561 alpha/beta hydrolase fold J168_02028 PF00313 'Cold-shock' DNA-binding domain J168_02029 PF00005 ABC transporter J168_02029 PF00664 ABC transporter transmembrane region J168_02030 PF00005 ABC transporter J168_02030 PF00664 ABC transporter transmembrane region J168_02031 PF01654 Cytochrome bd terminal oxidase subunit I J168_02032 PF02322 Cytochrome bd terminal oxidase subunit II J168_02036 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J168_02036 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J168_02037 PF00171 Aldehyde dehydrogenase family J168_02038 PF01472 PUA domain J168_02038 PF00696 Amino acid kinase family J168_02040 PF00206 Lyase J168_02041 PF01118 Semialdehyde dehydrogenase, NAD binding domain J168_02043 PF00696 Amino acid kinase family J168_02043 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J168_02046 PF00764 Arginosuccinate synthase J168_02047 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J168_02047 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J168_02049 PF09190 DALR domain J168_02049 PF01406 tRNA synthetases class I (C) catalytic domain J168_02050 PF02657 Fe-S metabolism associated domain J168_02052 PF01258 Prokaryotic dksA/traR C4-type zinc finger J168_02053 PF01809 Putative membrane protein insertion efficiency factor J168_02054 PF01979 Amidohydrolase family J168_02055 PF01551 Peptidase family M23 J168_02055 PF08460 Bacterial SH3 domain J168_02058 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J168_02059 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J168_02061 PF00753 Metallo-beta-lactamase superfamily J168_02065 PF01527 Transposase J168_02068 PF00295 Glycosyl hydrolases family 28 J168_02070 PF13419 Haloacid dehalogenase-like hydrolase J168_02072 PF01979 Amidohydrolase family J168_02074 PF08207 Elongation factor P (EF-P) KOW-like domain J168_02074 PF01132 Elongation factor P (EF-P) OB domain J168_02074 PF09285 Elongation factor P, C-terminal J168_02075 PF04055 Radical SAM superfamily J168_02076 PF13188 PAS domain J168_02076 PF03707 Bacterial signalling protein N terminal repeat J168_02076 PF00990 Diguanylate cyclase, GGDEF domain J168_02076 PF00563 EAL domain J168_02078 PF00588 SpoU rRNA Methylase family J168_02079 PF00459 Inositol monophosphatase family J168_02080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J168_02080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J168_02081 PF00545 ribonuclease J168_02084 PF00270 DEAD/DEAH box helicase J168_02084 PF03880 DbpA RNA binding domain J168_02084 PF00271 Helicase conserved C-terminal domain J168_02085 PF00156 Phosphoribosyl transferase domain J168_02086 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J168_02087 PF00135 Carboxylesterase family J168_02088 PF02798 Glutathione S-transferase, N-terminal domain J168_02088 PF14497 Glutathione S-transferase, C-terminal domain J168_02089 PF00313 'Cold-shock' DNA-binding domain J168_02090 PF07152 YaeQ protein J168_02092 PF00563 EAL domain J168_02092 PF00990 Diguanylate cyclase, GGDEF domain J168_02092 PF00072 Response regulator receiver domain J168_02093 PF01435 Peptidase family M48 J168_02094 PF00749 tRNA synthetases class I (E and Q), catalytic domain J168_02095 PF00106 short chain dehydrogenase J168_02096 PF05233 PHB accumulation regulatory domain J168_02096 PF07879 PHB/PHA accumulation regulator DNA-binding domain J168_02099 PF08676 MutL C terminal dimerisation domain J168_02099 PF01119 DNA mismatch repair protein, C-terminal domain J168_02100 PF11741 AMIN domain J168_02100 PF01520 N-acetylmuramoyl-L-alanine amidase J168_02101 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J168_02102 PF03853 YjeF-related protein N-terminus J168_02102 PF01256 Carbohydrate kinase J168_02103 PF08331 Domain of unknown function (DUF1730) J168_02104 PF13742 OB-fold nucleic acid binding domain J168_02104 PF02601 Exonuclease VII, large subunit J168_02106 PF03781 Sulfatase-modifying factor enzyme 1 J168_02107 PF01612 3'-5' exonuclease J168_02107 PF00570 HRDC domain J168_02109 PF13298 DNA polymerase Ligase (LigD) J168_02109 PF01068 ATP dependent DNA ligase domain J168_02109 PF04679 ATP dependent DNA ligase C terminal region J168_02113 PF00589 Phage integrase family J168_02117 PF05598 Transposase domain (DUF772) J168_02119 PF01527 Transposase J168_02123 PF14850 DNA-binding domain of Proline dehydrogenase J168_02123 PF00171 Aldehyde dehydrogenase family J168_02123 PF01619 Proline dehydrogenase J168_02123 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J168_02125 PF01527 Transposase J168_02127 PF13276 HTH-like domain J168_02127 PF13333 Integrase core domain J168_02127 PF00665 Integrase core domain J168_02129 PF00239 Resolvase, N terminal domain J168_02129 PF02796 Helix-turn-helix domain of resolvase J168_02132 PF02384 N-6 DNA Methylase J168_02133 PF09572 XamI restriction endonuclease J168_02145 PF01584 CheW-like domain J168_02146 PF00672 HAMP domain J168_02146 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02146 PF12729 Four helix bundle sensory module for signal transduction J168_02147 PF02245 Methylpurine-DNA glycosylase (MPG) J168_02148 PF00271 Helicase conserved C-terminal domain J168_02148 PF08494 DEAD/H associated J168_02148 PF00270 DEAD/DEAH box helicase J168_02151 PF04386 Stringent starvation protein B J168_02152 PF02798 Glutathione S-transferase, N-terminal domain J168_02152 PF00043 Glutathione S-transferase, C-terminal domain J168_02153 PF02167 Cytochrome C1 family J168_02154 PF00032 Cytochrome b(C-terminal)/b6/petD J168_02154 PF00033 Cytochrome b/b6/petB J168_02155 PF00355 Rieske [2Fe-2S] domain J168_02155 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J168_02156 PF01464 Transglycosylase SLT domain J168_02159 PF00919 Uncharacterized protein family UPF0004 J168_02159 PF04055 Radical SAM superfamily J168_02159 PF01938 TRAM domain J168_02160 PF02562 PhoH-like protein J168_02162 PF02130 Uncharacterized protein family UPF0054 J168_02164 PF03471 Transporter associated domain J168_02164 PF00571 CBS domain J168_02167 PF00171 Aldehyde dehydrogenase family J168_02168 PF00528 Binding-protein-dependent transport system inner membrane component J168_02169 PF00528 Binding-protein-dependent transport system inner membrane component J168_02170 PF08402 TOBE domain J168_02170 PF00005 ABC transporter J168_02171 PF02321 Outer membrane efflux protein J168_02172 PF07690 Major Facilitator Superfamily J168_02173 PF13533 Biotin-lipoyl like J168_02174 PF13416 Bacterial extracellular solute-binding protein J168_02175 PF00202 Aminotransferase class-III J168_02176 PF00120 Glutamine synthetase, catalytic domain J168_02177 PF07722 Peptidase C26 J168_02178 PF00120 Glutamine synthetase, catalytic domain J168_02179 PF01266 FAD dependent oxidoreductase J168_02180 PF00990 Diguanylate cyclase, GGDEF domain J168_02180 PF00072 Response regulator receiver domain J168_02181 PF01814 Hemerythrin HHE cation binding domain J168_02182 PF07690 Major Facilitator Superfamily J168_02182 PF00083 Sugar (and other) transporter J168_02184 PF00384 Molybdopterin oxidoreductase J168_02185 PF02634 FdhD/NarQ family J168_02186 PF07690 Major Facilitator Superfamily J168_02187 PF00202 Aminotransferase class-III J168_02189 PF04286 Protein of unknown function (DUF445) J168_02190 PF01627 Hpt domain J168_02190 PF00072 Response regulator receiver domain J168_02190 PF00512 His Kinase A (phospho-acceptor) domain J168_02190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J168_02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02190 PF00672 HAMP domain J168_02191 PF00072 Response regulator receiver domain J168_02192 PF07690 Major Facilitator Superfamily J168_02193 PF05088 Bacterial NAD-glutamate dehydrogenase J168_02195 PF00529 HlyD membrane-fusion protein of T1SS J168_02195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_02196 PF00873 AcrB/AcrD/AcrF family J168_02197 PF00356 Bacterial regulatory proteins, lacI family J168_02198 PF00391 PEP-utilising enzyme, mobile domain J168_02198 PF05524 PEP-utilising enzyme, N-terminal J168_02198 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J168_02198 PF00381 PTS HPr component phosphorylation site J168_02198 PF02896 PEP-utilising enzyme, TIM barrel domain J168_02199 PF00294 pfkB family carbohydrate kinase J168_02200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J168_02208 PF07549 SecD/SecF GG Motif J168_02208 PF02355 Protein export membrane protein J168_02209 PF02355 Protein export membrane protein J168_02209 PF13721 SecD export protein N-terminal TM region J168_02209 PF07549 SecD/SecF GG Motif J168_02210 PF02699 Preprotein translocase subunit J168_02211 PF01702 Queuine tRNA-ribosyltransferase J168_02212 PF02547 Queuosine biosynthesis protein J168_02221 PF02927 Cellulase N-terminal ig-like domain J168_02221 PF00759 Glycosyl hydrolase family 9 J168_02223 PF00037 4Fe-4S binding domain J168_02226 PF01467 Cytidylyltransferase-like J168_02228 PF00183 Hsp90 protein J168_02228 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02232 PF00593 TonB dependent receptor J168_02232 PF07715 TonB-dependent Receptor Plug Domain J168_02234 PF04616 Glycosyl hydrolases family 43 J168_02235 PF07532 Bacterial Ig-like domain (group 4) J168_02236 PF00593 TonB dependent receptor J168_02236 PF07715 TonB-dependent Receptor Plug Domain J168_02238 PF09286 Pro-kumamolisin, activation domain J168_02238 PF00082 Subtilase family J168_02244 PF13520 Amino acid permease J168_02247 PF00557 Metallopeptidase family M24 J168_02247 PF01321 Creatinase/Prolidase N-terminal domain J168_02248 PF00171 Aldehyde dehydrogenase family J168_02249 PF00701 Dihydrodipicolinate synthetase family J168_02250 PF04324 BFD-like [2Fe-2S] binding domain J168_02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_02252 PF01266 FAD dependent oxidoreductase J168_02253 PF05544 Proline racemase J168_02255 PF02881 SRP54-type protein, helical bundle domain J168_02255 PF00448 SRP54-type protein, GTPase domain J168_02256 PF00633 Helix-hairpin-helix motif J168_02256 PF10576 Iron-sulfur binding domain of endonuclease III J168_02256 PF00730 HhH-GPD superfamily base excision DNA repair protein J168_02256 PF14815 NUDIX domain J168_02257 PF04362 Bacterial Fe(2+) trafficking J168_02258 PF00072 Response regulator receiver domain J168_02258 PF13426 PAS domain J168_02258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02264 PF08212 Lipocalin-like domain J168_02266 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_02266 PF12806 Acetyl-CoA dehydrogenase C-terminal like J168_02266 PF02770 Acyl-CoA dehydrogenase, middle domain J168_02266 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_02268 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J168_02268 PF02779 Transketolase, pyrimidine binding domain J168_02268 PF02780 Transketolase, C-terminal domain J168_02272 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J168_02273 PF16123 Hydroxyacylglutathione hydrolase C-terminus J168_02273 PF00753 Metallo-beta-lactamase superfamily J168_02274 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J168_02274 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J168_02277 PF03808 Glycosyl transferase WecB/TagA/CpsF family J168_02280 PF14667 Polysaccharide biosynthesis C-terminal domain J168_02282 PF00534 Glycosyl transferases group 1 J168_02282 PF13439 Glycosyltransferase Family 4 J168_02286 PF02397 Bacterial sugar transferase J168_02290 PF13411 MerR HTH family regulatory protein J168_02291 PF00216 Bacterial DNA-binding protein J168_02292 PF03484 tRNA synthetase B5 domain J168_02292 PF03147 Ferredoxin-fold anticodon binding domain J168_02292 PF01588 Putative tRNA binding domain J168_02292 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J168_02292 PF03483 B3/4 domain J168_02293 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J168_02293 PF01409 tRNA synthetases class II core domain (F) J168_02294 PF00453 Ribosomal protein L20 J168_02295 PF01632 Ribosomal protein L35 J168_02297 PF05198 Translation initiation factor IF-3, N-terminal domain J168_02297 PF00707 Translation initiation factor IF-3, C-terminal domain J168_02298 PF02824 TGS domain J168_02298 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J168_02298 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J168_02298 PF03129 Anticodon binding domain J168_02299 PF00356 Bacterial regulatory proteins, lacI family J168_02300 PF00686 Starch binding domain J168_02300 PF00128 Alpha amylase, catalytic domain J168_02301 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J168_02303 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J168_02303 PF14508 Glycosyl-hydrolase 97 N-terminal J168_02303 PF10566 Glycoside hydrolase 97 J168_02307 PF00128 Alpha amylase, catalytic domain J168_02308 PF01527 Transposase J168_02312 PF00083 Sugar (and other) transporter J168_02314 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J168_02314 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J168_02316 PF01055 Glycosyl hydrolases family 31 J168_02316 PF17137 Domain of unknown function (DUF5110) J168_02316 PF16338 Domain of unknown function (DUF4968) J168_02319 PF00942 Cellulose binding domain J168_02319 PF03442 Carbohydrate binding domain X2 J168_02322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_02322 PF03466 LysR substrate binding domain J168_02324 PF01081 KDPG and KHG aldolase J168_02325 PF13378 Enolase C-terminal domain-like J168_02325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J168_02326 PF08450 SMP-30/Gluconolactonase/LRE-like region J168_02327 PF05035 2-keto-3-deoxy-galactonokinase J168_02328 PF00037 4Fe-4S binding domain J168_02328 PF11953 Domain of unknown function (DUF3470) J168_02330 PF00701 Dihydrodipicolinate synthetase family J168_02333 PF00578 AhpC/TSA family J168_02334 PF02562 PhoH-like protein J168_02334 PF13638 PIN domain J168_02337 PF08543 Phosphomethylpyrimidine kinase J168_02337 PF02581 Thiamine monophosphate synthase J168_02342 PF03466 LysR substrate binding domain J168_02342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_02343 PF17954 Quercetinase C-terminal cupin domain J168_02343 PF02678 Pirin J168_02344 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02344 PF13426 PAS domain J168_02344 PF08447 PAS fold J168_02346 PF02599 Global regulator protein family J168_02347 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J168_02347 PF02272 DHHA1 domain J168_02347 PF01411 tRNA synthetases class II (A) J168_02348 PF02631 RecX family J168_02349 PF00154 recA bacterial DNA recombination protein J168_02350 PF01726 LexA DNA binding domain J168_02350 PF00717 Peptidase S24-like J168_02351 PF03109 ABC1 family J168_02352 PF02464 Competence-damaged protein J168_02353 PF16360 GTP-binding GTPase Middle Region J168_02353 PF13167 GTP-binding GTPase N-terminal J168_02353 PF01926 50S ribosome-binding GTPase J168_02354 PF17209 Hfq protein J168_02356 PF00809 Pterin binding enzyme J168_02357 PF01434 Peptidase family M41 J168_02357 PF06480 FtsH Extracellular J168_02357 PF17862 AAA+ lid domain J168_02357 PF00004 ATPase family associated with various cellular activities (AAA) J168_02358 PF01728 FtsJ-like methyltransferase J168_02359 PF01985 CRS1 / YhbY (CRM) domain J168_02360 PF04430 Protein of unknown function (DUF498/DUF598) J168_02362 PF01476 LysM domain J168_02362 PF01551 Peptidase family M23 J168_02363 PF09335 SNARE associated Golgi protein J168_02365 PF01975 Survival protein SurE J168_02366 PF01713 Smr domain J168_02367 PF01142 tRNA pseudouridine synthase D (TruD) J168_02368 PF02542 YgbB family J168_02369 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J168_02370 PF04977 Septum formation initiator J168_02371 PF00113 Enolase, C-terminal TIM barrel domain J168_02371 PF03952 Enolase, N-terminal domain J168_02373 PF00793 DAHP synthetase I family J168_02374 PF00117 Glutamine amidotransferase class-I J168_02374 PF06418 CTP synthase N-terminus J168_02376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02376 PF00986 DNA gyrase B subunit, carboxyl terminus J168_02376 PF01751 Toprim domain J168_02376 PF00204 DNA gyrase B J168_02379 PF01384 Phosphate transporter family J168_02381 PF00571 CBS domain J168_02381 PF03471 Transporter associated domain J168_02381 PF01595 Cyclin M transmembrane N-terminal domain J168_02384 PF00296 Luciferase-like monooxygenase J168_02385 PF07690 Major Facilitator Superfamily J168_02386 PF00664 ABC transporter transmembrane region J168_02386 PF00005 ABC transporter J168_02387 PF00005 ABC transporter J168_02390 PF13579 Glycosyl transferase 4-like domain J168_02390 PF00534 Glycosyl transferases group 1 J168_02394 PF08241 Methyltransferase domain J168_02397 PF00535 Glycosyl transferase family 2 J168_02398 PF01943 Polysaccharide biosynthesis protein J168_02399 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J168_02403 PF05523 WxcM-like, C-terminal J168_02406 PF00034 Cytochrome c J168_02409 PF08281 Sigma-70, region 4 J168_02409 PF04542 Sigma-70 region 2 J168_02411 PF00082 Subtilase family J168_02412 PF01578 Cytochrome C assembly protein J168_02414 PF03100 CcmE J168_02415 PF01578 Cytochrome C assembly protein J168_02415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J168_02416 PF08534 Redoxin J168_02417 PF03918 Cytochrome C biogenesis protein J168_02419 PF00072 Response regulator receiver domain J168_02419 PF13426 PAS domain J168_02419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02420 PF06745 KaiC J168_02421 PF00072 Response regulator receiver domain J168_02421 PF00486 Transcriptional regulatory protein, C terminal J168_02422 PF00072 Response regulator receiver domain J168_02422 PF13188 PAS domain J168_02422 PF08448 PAS fold J168_02422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02422 PF00512 His Kinase A (phospho-acceptor) domain J168_02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02425 PF00672 HAMP domain J168_02425 PF02203 Tar ligand binding domain homologue J168_02430 PF13276 HTH-like domain J168_02430 PF00665 Integrase core domain J168_02430 PF13333 Integrase core domain J168_02431 PF01527 Transposase J168_02432 PF01381 Helix-turn-helix J168_02433 PF05284 Protein of unknown function (DUF736) J168_02434 PF04002 RadC-like JAB domain J168_02439 PF00589 Phage integrase family J168_02439 PF13356 Arm DNA-binding domain J168_02442 PF00593 TonB dependent receptor J168_02442 PF07715 TonB-dependent Receptor Plug Domain J168_02446 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J168_02451 PF07715 TonB-dependent Receptor Plug Domain J168_02451 PF00593 TonB dependent receptor J168_02453 PF10947 Protein of unknown function (DUF2628) J168_02455 PF00722 Glycosyl hydrolases family 16 J168_02455 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J168_02459 PF03412 Peptidase C39 family J168_02459 PF00005 ABC transporter J168_02459 PF00664 ABC transporter transmembrane region J168_02461 PF13614 AAA domain J168_02470 PF01131 DNA topoisomerase J168_02470 PF01751 Toprim domain J168_02471 PF01131 DNA topoisomerase J168_02471 PF01751 Toprim domain J168_02472 PF00145 C-5 cytosine-specific DNA methylase J168_02484 PF06250 YhcG PDDEXK nuclease domain J168_02484 PF17761 DUF1016 N-terminal domain J168_02485 PF01527 Transposase J168_02486 PF13333 Integrase core domain J168_02486 PF00665 Integrase core domain J168_02486 PF13276 HTH-like domain J168_02496 PF00069 Protein kinase domain J168_02496 PF03793 PASTA domain J168_02499 PF01618 MotA/TolQ/ExbB proton channel family J168_02500 PF00691 OmpA family J168_02500 PF13677 Membrane MotB of proton-channel complex MotA/MotB J168_02501 PF13614 AAA domain J168_02502 PF01584 CheW-like domain J168_02504 PF00072 Response regulator receiver domain J168_02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02505 PF01627 Hpt domain J168_02505 PF02895 Signal transducing histidine kinase, homodimeric domain J168_02505 PF01584 CheW-like domain J168_02505 PF09078 CheY binding J168_02506 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02506 PF00672 HAMP domain J168_02506 PF02203 Tar ligand binding domain homologue J168_02508 PF17200 Single Cache domain 2 J168_02508 PF17200 Single Cache domain 2 J168_02508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02508 PF00672 HAMP domain J168_02508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02508 PF00672 HAMP domain J168_02509 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02509 PF02203 Tar ligand binding domain homologue J168_02509 PF00672 HAMP domain J168_02511 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02511 PF02203 Tar ligand binding domain homologue J168_02511 PF00672 HAMP domain J168_02512 PF00672 HAMP domain J168_02512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02513 PF02203 Tar ligand binding domain homologue J168_02513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02513 PF00672 HAMP domain J168_02514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02514 PF02203 Tar ligand binding domain homologue J168_02514 PF00672 HAMP domain J168_02515 PF02203 Tar ligand binding domain homologue J168_02515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02515 PF00672 HAMP domain J168_02516 PF02203 Tar ligand binding domain homologue J168_02516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02516 PF00672 HAMP domain J168_02517 PF02203 Tar ligand binding domain homologue J168_02517 PF00672 HAMP domain J168_02517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02518 PF00672 HAMP domain J168_02518 PF02203 Tar ligand binding domain homologue J168_02519 PF00672 HAMP domain J168_02519 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02519 PF02203 Tar ligand binding domain homologue J168_02520 PF07317 Flagellar regulator YcgR J168_02520 PF07238 PilZ domain J168_02521 PF01584 CheW-like domain J168_02523 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_02523 PF02203 Tar ligand binding domain homologue J168_02523 PF00672 HAMP domain J168_02524 PF01739 CheR methyltransferase, SAM binding domain J168_02524 PF03705 CheR methyltransferase, all-alpha domain J168_02525 PF03975 CheD chemotactic sensory transduction J168_02526 PF01339 CheB methylesterase J168_02526 PF00072 Response regulator receiver domain J168_02527 PF00563 EAL domain J168_02527 PF00990 Diguanylate cyclase, GGDEF domain J168_02527 PF03707 Bacterial signalling protein N terminal repeat J168_02528 PF00561 alpha/beta hydrolase fold J168_02529 PF06434 Aconitate hydratase 2 N-terminus J168_02529 PF11791 Aconitate B N-terminal domain J168_02529 PF00330 Aconitase family (aconitate hydratase) J168_02532 PF00330 Aconitase family (aconitate hydratase) J168_02532 PF00694 Aconitase C-terminal domain J168_02534 PF00501 AMP-binding enzyme J168_02534 PF13193 AMP-binding enzyme C-terminal domain J168_02535 PF00378 Enoyl-CoA hydratase/isomerase J168_02536 PF00512 His Kinase A (phospho-acceptor) domain J168_02536 PF00072 Response regulator receiver domain J168_02536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_02536 PF01627 Hpt domain J168_02537 PF00072 Response regulator receiver domain J168_02538 PF01336 OB-fold nucleic acid binding domain J168_02538 PF00152 tRNA synthetases class II (D, K and N) J168_02539 PF00472 RF-1 domain J168_02539 PF03462 PCRF domain J168_02540 PF04397 LytTr DNA-binding domain J168_02540 PF00072 Response regulator receiver domain J168_02548 PF17768 RecJ OB domain J168_02548 PF02272 DHHA1 domain J168_02548 PF01368 DHH family J168_02550 PF01272 Transcription elongation factor, GreA/GreB, C-term J168_02550 PF03449 Transcription elongation factor, N-terminal J168_02551 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J168_02551 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J168_02551 PF02142 MGS-like domain J168_02553 PF00117 Glutamine amidotransferase class-I J168_02553 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J168_02554 PF05173 Dihydrodipicolinate reductase, C-terminus J168_02554 PF01113 Dihydrodipicolinate reductase, N-terminus J168_02555 PF03475 3-alpha domain J168_02555 PF03473 MOSC domain J168_02556 PF00155 Aminotransferase class I and II J168_02559 PF02421 Ferrous iron transport protein B J168_02559 PF07664 Ferrous iron transport protein B C terminus J168_02559 PF07670 Nucleoside recognition J168_02561 PF00378 Enoyl-CoA hydratase/isomerase J168_02563 PF00682 HMGL-like J168_02564 PF00106 short chain dehydrogenase J168_02565 PF09285 Elongation factor P, C-terminal J168_02565 PF08207 Elongation factor P (EF-P) KOW-like domain J168_02565 PF01132 Elongation factor P (EF-P) OB domain J168_02569 PF02913 FAD linked oxidases, C-terminal domain J168_02569 PF01565 FAD binding domain J168_02570 PF01842 ACT domain J168_02570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J168_02570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J168_02572 PF13520 Amino acid permease J168_02573 PF13520 Amino acid permease J168_02574 PF00596 Class II Aldolase and Adducin N-terminal domain J168_02575 PF03079 ARD/ARD' family J168_02579 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J168_02579 PF01502 Phosphoribosyl-AMP cyclohydrolase J168_02580 PF00977 Histidine biosynthesis protein J168_02581 PF00977 Histidine biosynthesis protein J168_02582 PF00117 Glutamine amidotransferase class-I J168_02583 PF00475 Imidazoleglycerol-phosphate dehydratase J168_02584 PF00155 Aminotransferase class I and II J168_02585 PF00815 Histidinol dehydrogenase J168_02586 PF08029 HisG, C-terminal domain J168_02586 PF01634 ATP phosphoribosyltransferase J168_02588 PF13393 Histidyl-tRNA synthetase J168_02588 PF03129 Anticodon binding domain J168_02589 PF13545 Crp-like helix-turn-helix domain J168_02589 PF00027 Cyclic nucleotide-binding domain J168_02591 PF14821 Threonine synthase N terminus J168_02591 PF00291 Pyridoxal-phosphate dependent enzyme J168_02593 PF00288 GHMP kinases N terminal domain J168_02593 PF08544 GHMP kinases C terminal J168_02594 PF01842 ACT domain J168_02594 PF00696 Amino acid kinase family J168_02594 PF00742 Homoserine dehydrogenase J168_02594 PF03447 Homoserine dehydrogenase, NAD binding domain J168_02594 PF13840 ACT domain J168_02596 PF13018 Extended Signal Peptide of Type V secretion system J168_02596 PF05594 Haemagluttinin repeat J168_02596 PF13332 Hemagglutinin repeat J168_02596 PF05860 haemagglutination activity domain J168_02596 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J168_02598 PF05594 Haemagluttinin repeat J168_02598 PF04829 Pre-toxin domain with VENN motif J168_02598 PF13332 Hemagglutinin repeat J168_02599 PF04829 Pre-toxin domain with VENN motif J168_02599 PF13332 Hemagglutinin repeat J168_02599 PF05594 Haemagluttinin repeat J168_02600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J168_02600 PF17287 POTRA domain J168_02600 PF08479 POTRA domain, ShlB-type J168_02602 PF01522 Polysaccharide deacetylase J168_02602 PF14883 Hypothetical glycosyl hydrolase family 13 J168_02603 PF00535 Glycosyl transferase family 2 J168_02606 PF00171 Aldehyde dehydrogenase family J168_02609 PF01180 Dihydroorotate dehydrogenase J168_02610 PF01565 FAD binding domain J168_02610 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J168_02611 PF00892 EamA-like transporter family J168_02612 PF01177 Asp/Glu/Hydantoin racemase J168_02613 PF07690 Major Facilitator Superfamily J168_02614 PF01569 PAP2 superfamily J168_02615 PF04551 GcpE protein J168_02617 PF00072 Response regulator receiver domain J168_02618 PF02013 Cellulose or protein binding domain J168_02618 PF00150 Cellulase (glycosyl hydrolase family 5) J168_02619 PF00990 Diguanylate cyclase, GGDEF domain J168_02619 PF00360 Phytochrome region J168_02619 PF00563 EAL domain J168_02619 PF01590 GAF domain J168_02620 PF00474 Sodium:solute symporter family J168_02621 PF01915 Glycosyl hydrolase family 3 C-terminal domain J168_02621 PF14310 Fibronectin type III-like domain J168_02621 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_02625 PF00342 Phosphoglucose isomerase J168_02626 PF02261 Aspartate decarboxylase J168_02627 PF02569 Pantoate-beta-alanine ligase J168_02628 PF02548 Ketopantoate hydroxymethyltransferase J168_02629 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J168_02630 PF01743 Poly A polymerase head domain J168_02630 PF12626 Polymerase A arginine-rich C-terminus J168_02630 PF12627 Probable RNA and SrmB- binding site of polymerase A J168_02634 PF02649 Type I GTP cyclohydrolase folE2 J168_02635 PF01520 N-acetylmuramoyl-L-alanine amidase J168_02637 PF00128 Alpha amylase, catalytic domain J168_02639 PF01527 Transposase J168_02648 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J168_02651 PF01464 Transglycosylase SLT domain J168_02652 PF00437 Type II/IV secretion system protein J168_02653 PF03743 Bacterial conjugation TrbI-like protein J168_02657 PF02534 Type IV secretory system Conjugative DNA transfer J168_02660 PF17757 UvrB interaction domain J168_02660 PF12344 Ultra-violet resistance protein B J168_02660 PF02151 UvrB/uvrC motif J168_02660 PF04851 Type III restriction enzyme, res subunit J168_02660 PF00271 Helicase conserved C-terminal domain J168_02668 PF01527 Transposase J168_02669 PF13276 HTH-like domain J168_02669 PF00665 Integrase core domain J168_02669 PF13333 Integrase core domain J168_02675 PF03466 LysR substrate binding domain J168_02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_02676 PF02525 Flavodoxin-like fold J168_02677 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J168_02677 PF02403 Seryl-tRNA synthetase N-terminal domain J168_02678 PF03544 Gram-negative bacterial TonB protein C-terminal J168_02680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J168_02681 PF01842 ACT domain J168_02681 PF01817 Chorismate mutase type II J168_02681 PF00800 Prephenate dehydratase J168_02682 PF00266 Aminotransferase class-V J168_02683 PF00174 Oxidoreductase molybdopterin binding domain J168_02684 PF01794 Ferric reductase like transmembrane component J168_02690 PF00392 Bacterial regulatory proteins, gntR family J168_02690 PF07702 UTRA domain J168_02692 PF07969 Amidohydrolase family J168_02693 PF00221 Aromatic amino acid lyase J168_02695 PF17391 Urocanase N-terminal domain J168_02695 PF01175 Urocanase Rossmann-like domain J168_02695 PF17392 Urocanase C-terminal domain J168_02696 PF01011 PQQ enzyme repeat J168_02697 PF00521 DNA gyrase/topoisomerase IV, subunit A J168_02697 PF03989 DNA gyrase C-terminal domain, beta-propeller J168_02698 PF01008 Initiation factor 2 subunit family J168_02700 PF00152 tRNA synthetases class II (D, K and N) J168_02701 PF01653 NAD-dependent DNA ligase adenylation domain J168_02701 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J168_02701 PF00533 BRCA1 C Terminus (BRCT) domain J168_02701 PF03120 NAD-dependent DNA ligase OB-fold domain J168_02701 PF12826 Helix-hairpin-helix motif J168_02702 PF00155 Aminotransferase class I and II J168_02704 PF04354 ZipA, C-terminal FtsZ-binding domain J168_02705 PF02463 RecF/RecN/SMC N terminal domain J168_02706 PF03948 Ribosomal protein L9, C-terminal domain J168_02706 PF01281 Ribosomal protein L9, N-terminal domain J168_02707 PF01084 Ribosomal protein S18 J168_02708 PF01250 Ribosomal protein S6 J168_02709 PF01521 Iron-sulphur cluster biosynthesis J168_02710 PF00152 tRNA synthetases class II (D, K and N) J168_02710 PF01336 OB-fold nucleic acid binding domain J168_02714 PF04299 Putative FMN-binding domain J168_02717 PF00072 Response regulator receiver domain J168_02717 PF00196 Bacterial regulatory proteins, luxR family J168_02726 PF00484 Carbonic anhydrase J168_02727 PF06052 3-hydroxyanthranilic acid dioxygenase J168_02729 PF00266 Aminotransferase class-V J168_02730 PF01494 FAD binding domain J168_02731 PF08411 Exonuclease C-terminal J168_02731 PF00929 Exonuclease J168_02735 PF01513 ATP-NAD kinase J168_02736 PF01170 Putative RNA methylase family UPF0020 J168_02736 PF02926 THUMP domain J168_02736 PF10672 S-adenosylmethionine-dependent methyltransferase J168_02743 PF00581 Rhodanese-like domain J168_02744 PF00293 NUDIX domain J168_02745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J168_02745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J168_02746 PF00378 Enoyl-CoA hydratase/isomerase J168_02748 PF00730 HhH-GPD superfamily base excision DNA repair protein J168_02748 PF00633 Helix-hairpin-helix motif J168_02748 PF10576 Iron-sulfur binding domain of endonuclease III J168_02749 PF01740 STAS domain J168_02749 PF00916 Sulfate permease family J168_02750 PF00484 Carbonic anhydrase J168_02753 PF12849 PBP superfamily domain J168_02754 PF12849 PBP superfamily domain J168_02755 PF00528 Binding-protein-dependent transport system inner membrane component J168_02756 PF00528 Binding-protein-dependent transport system inner membrane component J168_02757 PF00005 ABC transporter J168_02758 PF01895 PhoU domain J168_02760 PF00929 Exonuclease J168_02761 PF07694 5TMR of 5TMR-LYT J168_02761 PF00990 Diguanylate cyclase, GGDEF domain J168_02762 PF00588 SpoU rRNA Methylase family J168_02762 PF08032 RNA 2'-O ribose methyltransferase substrate binding J168_02764 PF17876 Cold shock domain J168_02764 PF08461 Ribonuclease R winged-helix domain J168_02764 PF08206 Ribonuclease B OB domain J168_02764 PF00575 S1 RNA binding domain J168_02764 PF00773 RNB domain J168_02767 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_02767 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_02767 PF02770 Acyl-CoA dehydrogenase, middle domain J168_02768 PF01209 ubiE/COQ5 methyltransferase family J168_02769 PF00809 Pterin binding enzyme J168_02769 PF02574 Homocysteine S-methyltransferase J168_02770 PF02607 B12 binding domain J168_02770 PF02965 Vitamin B12 dependent methionine synthase, activation domain J168_02770 PF00809 Pterin binding enzyme J168_02770 PF02310 B12 binding domain J168_02770 PF02574 Homocysteine S-methyltransferase J168_02772 PF00294 pfkB family carbohydrate kinase J168_02773 PF07690 Major Facilitator Superfamily J168_02774 PF00356 Bacterial regulatory proteins, lacI family J168_02777 PF04102 SlyX J168_02778 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J168_02778 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J168_02778 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J168_02779 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J168_02779 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J168_02780 PF00255 Glutathione peroxidase J168_02782 PF00392 Bacterial regulatory proteins, gntR family J168_02783 PF00005 ABC transporter J168_02788 PF00206 Lyase J168_02788 PF10415 Fumarase C C-terminus J168_02789 PF00571 CBS domain J168_02789 PF03471 Transporter associated domain J168_02789 PF01595 Cyclin M transmembrane N-terminal domain J168_02791 PF08328 Adenylosuccinate lyase C-terminal J168_02791 PF00206 Lyase J168_02793 PF08007 Cupin superfamily protein J168_02795 PF00676 Dehydrogenase E1 component J168_02795 PF16870 2-oxoglutarate dehydrogenase C-terminal J168_02795 PF16078 2-oxoglutarate dehydrogenase N-terminus J168_02795 PF02779 Transketolase, pyrimidine binding domain J168_02796 PF02817 e3 binding domain J168_02796 PF00364 Biotin-requiring enzyme J168_02796 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J168_02797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J168_02797 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_02798 PF03641 Possible lysine decarboxylase J168_02799 PF01205 Uncharacterized protein family UPF0029 J168_02800 PF00664 ABC transporter transmembrane region J168_02800 PF00005 ABC transporter J168_02801 PF03466 LysR substrate binding domain J168_02801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_02802 PF03412 Peptidase C39 family J168_02802 PF00664 ABC transporter transmembrane region J168_02802 PF00005 ABC transporter J168_02807 PF08543 Phosphomethylpyrimidine kinase J168_02809 PF00226 DnaJ domain J168_02809 PF00684 DnaJ central domain J168_02809 PF01556 DnaJ C terminal domain J168_02810 PF00012 Hsp70 protein J168_02811 PF01025 GrpE J168_02812 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J168_02812 PF01628 HrcA protein C terminal domain J168_02813 PF02463 RecF/RecN/SMC N terminal domain J168_02814 PF01475 Ferric uptake regulator family J168_02815 PF04355 SmpA / OmlA family J168_02816 PF03658 RnfH family Ubiquitin J168_02817 PF03364 Polyketide cyclase / dehydrase and lipid transport J168_02818 PF01668 SmpB protein J168_02819 PF00082 Subtilase family J168_02828 PF01527 Transposase J168_02836 PF05598 Transposase domain (DUF772) J168_02847 PF00990 Diguanylate cyclase, GGDEF domain J168_02849 PF08448 PAS fold J168_02849 PF00990 Diguanylate cyclase, GGDEF domain J168_02850 PF02321 Outer membrane efflux protein J168_02851 PF00106 short chain dehydrogenase J168_02852 PF00873 AcrB/AcrD/AcrF family J168_02853 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_02853 PF00529 HlyD membrane-fusion protein of T1SS J168_02856 PF03466 LysR substrate binding domain J168_02856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_02858 PF05736 OprF membrane domain J168_02858 PF00691 OmpA family J168_02859 PF03441 FAD binding domain of DNA photolyase J168_02859 PF00875 DNA photolyase J168_02860 PF00772 DnaB-like helicase N terminal domain J168_02860 PF03796 DnaB-like helicase C terminal domain J168_02861 PF03358 NADPH-dependent FMN reductase J168_02862 PF00733 Asparagine synthase J168_02862 PF13537 Glutamine amidotransferase domain J168_02863 PF00043 Glutathione S-transferase, C-terminal domain J168_02863 PF02798 Glutathione S-transferase, N-terminal domain J168_02865 PF02770 Acyl-CoA dehydrogenase, middle domain J168_02865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_02865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_02868 PF01026 TatD related DNase J168_02869 PF00899 ThiF family J168_02872 PF00313 'Cold-shock' DNA-binding domain J168_02874 PF02253 Phospholipase A1 J168_02875 PF00484 Carbonic anhydrase J168_02877 PF05683 Fumarase C-terminus J168_02877 PF05681 Fumarate hydratase (Fumerase) J168_02878 PF00005 ABC transporter J168_02879 PF00970 Oxidoreductase FAD-binding domain J168_02879 PF00175 Oxidoreductase NAD-binding domain J168_02880 PF00255 Glutathione peroxidase J168_02881 PF01432 Peptidase family M3 J168_02882 PF12802 MarR family J168_02887 PF00854 POT family J168_02889 PF01915 Glycosyl hydrolase family 3 C-terminal domain J168_02889 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_02889 PF14310 Fibronectin type III-like domain J168_02891 PF07690 Major Facilitator Superfamily J168_02892 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_02892 PF00529 HlyD membrane-fusion protein of T1SS J168_02893 PF02321 Outer membrane efflux protein J168_02896 PF03989 DNA gyrase C-terminal domain, beta-propeller J168_02896 PF00521 DNA gyrase/topoisomerase IV, subunit A J168_02898 PF05724 Thiopurine S-methyltransferase (TPMT) J168_02899 PF00210 Ferritin-like domain J168_02900 PF01804 Penicillin amidase J168_02901 PF00593 TonB dependent receptor J168_02901 PF07715 TonB-dependent Receptor Plug Domain J168_02903 PF13537 Glutamine amidotransferase domain J168_02903 PF00733 Asparagine synthase J168_02904 PF01546 Peptidase family M20/M25/M40 J168_02904 PF07687 Peptidase dimerisation domain J168_02905 PF03960 ArsC family J168_02906 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J168_02906 PF14602 Hexapeptide repeat of succinyl-transferase J168_02906 PF00132 Bacterial transferase hexapeptide (six repeats) J168_02907 PF01909 Nucleotidyltransferase domain J168_02907 PF01966 HD domain J168_02907 PF08335 GlnD PII-uridylyltransferase J168_02908 PF00557 Metallopeptidase family M24 J168_02915 PF00318 Ribosomal protein S2 J168_02916 PF00889 Elongation factor TS J168_02917 PF00072 Response regulator receiver domain J168_02917 PF00990 Diguanylate cyclase, GGDEF domain J168_02918 PF00696 Amino acid kinase family J168_02919 PF01765 Ribosome recycling factor J168_02920 PF01255 Putative undecaprenyl diphosphate synthase J168_02922 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J168_02922 PF13288 DXP reductoisomerase C-terminal domain J168_02922 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J168_02923 PF02163 Peptidase family M50 J168_02923 PF17820 PDZ domain J168_02924 PF01103 Surface antigen J168_02924 PF07244 Surface antigen variable number repeat J168_02926 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J168_02926 PF00132 Bacterial transferase hexapeptide (six repeats) J168_02927 PF07977 FabA-like domain J168_02928 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J168_02928 PF00132 Bacterial transferase hexapeptide (six repeats) J168_02929 PF02684 Lipid-A-disaccharide synthetase J168_02930 PF01351 Ribonuclease HII J168_02931 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J168_02931 PF07733 Bacterial DNA polymerase III alpha NTPase domain J168_02931 PF14579 Helix-hairpin-helix motif J168_02931 PF01336 OB-fold nucleic acid binding domain J168_02931 PF02811 PHP domain J168_02932 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J168_02939 PF03551 Transcriptional regulator PadR-like family J168_02943 PF02592 Putative vitamin uptake transporter J168_02945 PF02574 Homocysteine S-methyltransferase J168_02946 PF00324 Amino acid permease J168_02947 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J168_02948 PF00005 ABC transporter J168_02948 PF13732 Domain of unknown function (DUF4162) J168_02951 PF09334 tRNA synthetases class I (M) J168_02951 PF01588 Putative tRNA binding domain J168_02953 PF04060 Putative Fe-S cluster J168_02956 PF04542 Sigma-70 region 2 J168_02956 PF04545 Sigma-70, region 4 J168_02965 PF01042 Endoribonuclease L-PSP J168_02968 PF09924 Uncharacterised conserved protein (DUF2156) J168_02968 PF03706 Lysylphosphatidylglycerol synthase TM region J168_02975 PF07690 Major Facilitator Superfamily J168_02976 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J168_02977 PF03831 PhnA domain J168_02977 PF08274 PhnA Zinc-Ribbon J168_02979 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J168_02983 PF01258 Prokaryotic dksA/traR C4-type zinc finger J168_02985 PF07043 Protein of unknown function (DUF1328) J168_02986 PF01863 Protein of unknown function DUF45 J168_02988 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J168_02988 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J168_02989 PF12951 Passenger-associated-transport-repeat J168_02989 PF03797 Autotransporter beta-domain J168_02989 PF00082 Subtilase family J168_02990 PF02803 Thiolase, C-terminal domain J168_02990 PF00108 Thiolase, N-terminal domain J168_02993 PF00990 Diguanylate cyclase, GGDEF domain J168_02993 PF00072 Response regulator receiver domain J168_02996 PF01068 ATP dependent DNA ligase domain J168_02996 PF04675 DNA ligase N terminus J168_02996 PF04679 ATP dependent DNA ligase C terminal region J168_02998 PF04675 DNA ligase N terminus J168_02998 PF04679 ATP dependent DNA ligase C terminal region J168_02998 PF01068 ATP dependent DNA ligase domain J168_02999 PF00270 DEAD/DEAH box helicase J168_02999 PF00271 Helicase conserved C-terminal domain J168_02999 PF08494 DEAD/H associated J168_03001 PF01494 FAD binding domain J168_03002 PF00313 'Cold-shock' DNA-binding domain J168_03003 PF01048 Phosphorylase superfamily J168_03005 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_03006 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J168_03007 PF01593 Flavin containing amine oxidoreductase J168_03008 PF01323 DSBA-like thioredoxin domain J168_03010 PF05958 tRNA (Uracil-5-)-methyltransferase J168_03012 PF02565 Recombination protein O C terminal J168_03012 PF11967 Recombination protein O N terminal J168_03013 PF01926 50S ribosome-binding GTPase J168_03013 PF07650 KH domain J168_03014 PF14622 Ribonuclease-III-like J168_03014 PF00035 Double-stranded RNA binding motif J168_03016 PF10502 Signal peptidase, peptidase S26 J168_03017 PF06421 GTP-binding protein LepA C-terminus J168_03017 PF03144 Elongation factor Tu domain 2 J168_03017 PF00679 Elongation factor G C-terminus J168_03017 PF00009 Elongation factor Tu GTP binding domain J168_03018 PF13180 PDZ domain J168_03020 PF04542 Sigma-70 region 2 J168_03020 PF08281 Sigma-70, region 4 J168_03021 PF00378 Enoyl-CoA hydratase/isomerase J168_03021 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J168_03021 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J168_03022 PF01545 Cation efflux family J168_03023 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J168_03023 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J168_03024 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J168_03024 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J168_03024 PF00378 Enoyl-CoA hydratase/isomerase J168_03025 PF00378 Enoyl-CoA hydratase/isomerase J168_03026 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_03026 PF02770 Acyl-CoA dehydrogenase, middle domain J168_03026 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_03027 PF00171 Aldehyde dehydrogenase family J168_03028 PF01381 Helix-turn-helix J168_03028 PF06114 IrrE N-terminal-like domain J168_03028 PF09856 Predicted transcriptional regulator (DUF2083) J168_03030 PF07745 Glycosyl hydrolase family 53 J168_03031 PF02837 Glycosyl hydrolases family 2, sugar binding domain J168_03031 PF16355 Domain of unknown function (DUF4982) J168_03031 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J168_03031 PF00703 Glycosyl hydrolases family 2 J168_03031 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J168_03035 PF03527 RHS protein J168_03035 PF05593 RHS Repeat J168_03038 PF01624 MutS domain I J168_03038 PF00488 MutS domain V J168_03038 PF05190 MutS family domain IV J168_03038 PF05192 MutS domain III J168_03038 PF05188 MutS domain II J168_03040 PF00141 Peroxidase J168_03041 PF01479 S4 domain J168_03044 PF01554 MatE J168_03045 PF01245 Ribosomal protein L19 J168_03046 PF01746 tRNA (Guanine-1)-methyltransferase J168_03047 PF01782 RimM N-terminal domain J168_03047 PF05239 PRC-barrel domain J168_03048 PF00886 Ribosomal protein S16 J168_03049 PF01063 Amino-transferase class IV J168_03050 PF03060 Nitronate monooxygenase J168_03051 PF02978 Signal peptide binding domain J168_03051 PF02881 SRP54-type protein, helical bundle domain J168_03051 PF00448 SRP54-type protein, GTPase domain J168_03052 PF01578 Cytochrome C assembly protein J168_03053 PF01263 Aldose 1-epimerase J168_03054 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J168_03055 PF00722 Glycosyl hydrolases family 16 J168_03056 PF00072 Response regulator receiver domain J168_03057 PF13426 PAS domain J168_03057 PF00072 Response regulator receiver domain J168_03057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03058 PF00072 Response regulator receiver domain J168_03058 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J168_03058 PF00512 His Kinase A (phospho-acceptor) domain J168_03058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03058 PF00672 HAMP domain J168_03058 PF01627 Hpt domain J168_03059 PF03705 CheR methyltransferase, all-alpha domain J168_03059 PF01739 CheR methyltransferase, SAM binding domain J168_03060 PF01339 CheB methylesterase J168_03061 PF00512 His Kinase A (phospho-acceptor) domain J168_03061 PF13493 Domain of unknown function (DUF4118) J168_03061 PF13492 GAF domain J168_03061 PF02702 Osmosensitive K+ channel His kinase sensor domain J168_03061 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03062 PF07237 Protein of unknown function (DUF1428) J168_03063 PF00085 Thioredoxin J168_03064 PF07715 TonB-dependent Receptor Plug Domain J168_03064 PF00593 TonB dependent receptor J168_03065 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J168_03065 PF04616 Glycosyl hydrolases family 43 J168_03066 PF08448 PAS fold J168_03066 PF00072 Response regulator receiver domain J168_03066 PF00512 His Kinase A (phospho-acceptor) domain J168_03066 PF13188 PAS domain J168_03066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03067 PF17149 Periplasmic sensor domain found in signal transduction proteins J168_03067 PF00672 HAMP domain J168_03067 PF00072 Response regulator receiver domain J168_03067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03067 PF01627 Hpt domain J168_03067 PF00512 His Kinase A (phospho-acceptor) domain J168_03069 PF13581 Histidine kinase-like ATPase domain J168_03070 PF01740 STAS domain J168_03071 PF08678 Rsbr N terminal J168_03071 PF01740 STAS domain J168_03073 PF00183 Hsp90 protein J168_03073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03074 PF12833 Helix-turn-helix domain J168_03076 PF05656 Protein of unknown function (DUF805) J168_03077 PF18073 Rubredoxin metal binding domain J168_03079 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J168_03080 PF00510 Cytochrome c oxidase subunit III J168_03081 PF00115 Cytochrome C and Quinol oxidase polypeptide I J168_03082 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J168_03082 PF06481 COX Aromatic Rich Motif J168_03084 PF02401 LytB protein J168_03085 PF01252 Signal peptidase (SPase) II J168_03086 PF08264 Anticodon-binding domain of tRNA J168_03086 PF00133 tRNA synthetases class I (I, L, M and V) J168_03086 PF06827 Zinc finger found in FPG and IleRS J168_03087 PF06574 FAD synthetase J168_03087 PF01687 Riboflavin kinase J168_03088 PF03023 Lipid II flippase MurJ J168_03089 PF01649 Ribosomal protein S20 J168_03090 PF01926 50S ribosome-binding GTPase J168_03090 PF01018 GTP1/OBG J168_03091 PF01016 Ribosomal L27 protein J168_03092 PF00829 Ribosomal prokaryotic L21 protein J168_03093 PF00005 ABC transporter J168_03093 PF17755 UvrA DNA-binding domain J168_03093 PF17760 UvrA interaction domain J168_03096 PF00378 Enoyl-CoA hydratase/isomerase J168_03102 PF04376 Arginine-tRNA-protein transferase, N terminus J168_03102 PF04377 Arginine-tRNA-protein transferase, C terminus J168_03104 PF02222 ATP-grasp domain J168_03109 PF00730 HhH-GPD superfamily base excision DNA repair protein J168_03112 PF00072 Response regulator receiver domain J168_03112 PF00196 Bacterial regulatory proteins, luxR family J168_03113 PF07730 Histidine kinase J168_03115 PF03775 Septum formation inhibitor MinC, C-terminal domain J168_03115 PF05209 Septum formation inhibitor MinC, N-terminal domain J168_03116 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J168_03117 PF03776 Septum formation topological specificity factor MinE J168_03119 PF00512 His Kinase A (phospho-acceptor) domain J168_03119 PF08521 Two-component sensor kinase N-terminal J168_03119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03120 PF00072 Response regulator receiver domain J168_03120 PF00486 Transcriptional regulatory protein, C terminal J168_03123 PF00884 Sulfatase J168_03123 PF08019 Phosphoethanolamine transferase EptA/EptB J168_03126 PF07690 Major Facilitator Superfamily J168_03129 PF02347 Glycine cleavage system P-protein J168_03130 PF00135 Carboxylesterase family J168_03131 PF00248 Aldo/keto reductase family J168_03132 PF18011 C-terminal domain found in long catalases J168_03132 PF06628 Catalase-related immune-responsive J168_03132 PF00199 Catalase J168_03140 PF09078 CheY binding J168_03140 PF02895 Signal transducing histidine kinase, homodimeric domain J168_03140 PF01584 CheW-like domain J168_03140 PF01627 Hpt domain J168_03140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03141 PF00672 HAMP domain J168_03141 PF02203 Tar ligand binding domain homologue J168_03141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_03142 PF01584 CheW-like domain J168_03143 PF13426 PAS domain J168_03143 PF00563 EAL domain J168_03143 PF00990 Diguanylate cyclase, GGDEF domain J168_03144 PF01739 CheR methyltransferase, SAM binding domain J168_03144 PF03705 CheR methyltransferase, all-alpha domain J168_03145 PF01339 CheB methylesterase J168_03145 PF00072 Response regulator receiver domain J168_03146 PF13091 PLD-like domain J168_03147 PF01431 Peptidase family M13 J168_03147 PF05649 Peptidase family M13 J168_03149 PF00300 Histidine phosphatase superfamily (branch 1) J168_03150 PF04493 Endonuclease V J168_03152 PF02678 Pirin J168_03152 PF05726 Pirin C-terminal cupin domain J168_03155 PF02678 Pirin J168_03155 PF05726 Pirin C-terminal cupin domain J168_03156 PF02554 Carbon starvation protein CstA J168_03156 PF13722 5TM C-terminal transporter carbon starvation CstA J168_03157 PF04328 Selenoprotein, putative J168_03165 PF02625 XdhC and CoxI family J168_03165 PF13478 XdhC Rossmann domain J168_03166 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J168_03166 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J168_03167 PF03450 CO dehydrogenase flavoprotein C-terminal domain J168_03167 PF00941 FAD binding domain in molybdopterin dehydrogenase J168_03168 PF10518 TAT (twin-arginine translocation) pathway signal sequence J168_03168 PF00111 2Fe-2S iron-sulfur cluster binding domain J168_03168 PF01799 [2Fe-2S] binding domain J168_03169 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_03169 PF14765 Polyketide synthase dehydratase J168_03169 PF00550 Phosphopantetheine attachment site J168_03169 PF08659 KR domain J168_03169 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_03169 PF16197 Ketoacyl-synthetase C-terminal extension J168_03169 PF09277 Erythronolide synthase, docking J168_03169 PF08990 Erythronolide synthase docking J168_03169 PF08240 Alcohol dehydrogenase GroES-like domain J168_03169 PF00698 Acyl transferase domain J168_03170 PF00563 EAL domain J168_03170 PF01590 GAF domain J168_03170 PF00990 Diguanylate cyclase, GGDEF domain J168_03170 PF00360 Phytochrome region J168_03171 PF00436 Single-strand binding protein family J168_03172 PF00348 Polyprenyl synthetase J168_03174 PF08245 Mur ligase middle domain J168_03174 PF02875 Mur ligase family, glutamate ligase domain J168_03177 PF00696 Amino acid kinase family J168_03177 PF01842 ACT domain J168_03178 PF02567 Phenazine biosynthesis-like protein J168_03179 PF02567 Phenazine biosynthesis-like protein J168_03181 PF02566 OsmC-like protein J168_03182 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J168_03182 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J168_03183 PF03652 Holliday junction resolvase J168_03184 PF02622 Uncharacterized ACR, COG1678 J168_03185 PF13302 Acetyltransferase (GNAT) domain J168_03185 PF13673 Acetyltransferase (GNAT) domain J168_03185 PF03352 Methyladenine glycosylase J168_03185 PF00117 Glutamine amidotransferase class-I J168_03185 PF00958 GMP synthase C terminal domain J168_03188 PF03211 Pectate lyase J168_03189 PF00437 Type II/IV secretion system protein J168_03190 PF00437 Type II/IV secretion system protein J168_03191 PF01168 Alanine racemase, N-terminal domain J168_03192 PF03807 NADP oxidoreductase coenzyme F420-dependent J168_03192 PF14748 Pyrroline-5-carboxylate reductase dimerisation J168_03194 PF01551 Peptidase family M23 J168_03198 PF01965 DJ-1/PfpI family J168_03200 PF02082 Transcriptional regulator J168_03201 PF01458 Uncharacterized protein family (UPF0051) J168_03202 PF00005 ABC transporter J168_03203 PF01458 Uncharacterized protein family (UPF0051) J168_03204 PF00266 Aminotransferase class-V J168_03206 PF00355 Rieske [2Fe-2S] domain J168_03207 PF00593 TonB dependent receptor J168_03207 PF07715 TonB-dependent Receptor Plug Domain J168_03208 PF18331 PKHD-type hydroxylase C-terminal domain J168_03208 PF13640 2OG-Fe(II) oxygenase superfamily J168_03213 PF02424 ApbE family J168_03214 PF00175 Oxidoreductase NAD-binding domain J168_03214 PF00258 Flavodoxin J168_03214 PF00667 FAD binding domain J168_03218 PF07687 Peptidase dimerisation domain J168_03218 PF01546 Peptidase family M20/M25/M40 J168_03220 PF01636 Phosphotransferase enzyme family J168_03221 PF00483 Nucleotidyl transferase J168_03222 PF00308 Bacterial dnaA protein J168_03223 PF01594 AI-2E family transporter J168_03225 PF00586 AIR synthase related protein, N-terminal domain J168_03225 PF02769 AIR synthase related protein, C-terminal domain J168_03227 PF00551 Formyl transferase J168_03231 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J168_03232 PF01722 BolA-like protein J168_03233 PF01380 SIS domain J168_03233 PF00571 CBS domain J168_03236 PF03968 OstA-like protein J168_03237 PF00005 ABC transporter J168_03238 PF00309 Sigma-54 factor, Activator interacting domain (AID) J168_03238 PF04963 Sigma-54 factor, core binding domain J168_03238 PF04552 Sigma-54, DNA binding domain J168_03239 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J168_03240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J168_03241 PF07475 HPr Serine kinase C-terminal domain J168_03241 PF02603 HPr Serine kinase N terminus J168_03242 PF03668 P-loop ATPase protein family J168_03244 PF00381 PTS HPr component phosphorylation site J168_03245 PF02896 PEP-utilising enzyme, TIM barrel domain J168_03245 PF00391 PEP-utilising enzyme, mobile domain J168_03245 PF05524 PEP-utilising enzyme, N-terminal J168_03246 PF03448 MgtE intracellular N domain J168_03246 PF00571 CBS domain J168_03246 PF01769 Divalent cation transporter J168_03247 PF00756 Putative esterase J168_03248 PF02322 Cytochrome bd terminal oxidase subunit II J168_03249 PF01654 Cytochrome bd terminal oxidase subunit I J168_03251 PF00324 Amino acid permease J168_03252 PF00544 Pectate lyase J168_03253 PF00561 alpha/beta hydrolase fold J168_03254 PF00196 Bacterial regulatory proteins, luxR family J168_03255 PF00324 Amino acid permease J168_03260 PF12706 Beta-lactamase superfamily domain J168_03261 PF04820 Tryptophan halogenase J168_03266 PF09278 MerR, DNA binding J168_03266 PF00376 MerR family regulatory protein J168_03267 PF07690 Major Facilitator Superfamily J168_03269 PF03738 Glutathionylspermidine synthase preATP-grasp J168_03274 PF04012 PspA/IM30 family J168_03276 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J168_03276 PF01243 Pyridoxamine 5'-phosphate oxidase J168_03277 PF01202 Shikimate kinase J168_03278 PF01761 3-dehydroquinate synthase J168_03280 PF01208 Uroporphyrinogen decarboxylase (URO-D) J168_03293 PF01590 GAF domain J168_03293 PF00158 Sigma-54 interaction domain J168_03293 PF02954 Bacterial regulatory protein, Fis family J168_03294 PF07690 Major Facilitator Superfamily J168_03295 PF00512 His Kinase A (phospho-acceptor) domain J168_03295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03295 PF01627 Hpt domain J168_03295 PF17149 Periplasmic sensor domain found in signal transduction proteins J168_03295 PF00072 Response regulator receiver domain J168_03295 PF00672 HAMP domain J168_03296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03296 PF01627 Hpt domain J168_03296 PF00512 His Kinase A (phospho-acceptor) domain J168_03296 PF00072 Response regulator receiver domain J168_03296 PF00672 HAMP domain J168_03296 PF17149 Periplasmic sensor domain found in signal transduction proteins J168_03298 PF00072 Response regulator receiver domain J168_03298 PF01627 Hpt domain J168_03298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03298 PF00512 His Kinase A (phospho-acceptor) domain J168_03299 PF04264 YceI-like domain J168_03303 PF03313 Serine dehydratase alpha chain J168_03303 PF03315 Serine dehydratase beta chain J168_03304 PF12697 Alpha/beta hydrolase family J168_03305 PF00696 Amino acid kinase family J168_03305 PF00742 Homoserine dehydrogenase J168_03305 PF03447 Homoserine dehydrogenase, NAD binding domain J168_03306 PF01053 Cys/Met metabolism PLP-dependent enzyme J168_03307 PF00561 alpha/beta hydrolase fold J168_03309 PF08525 Opacity-associated protein A N-terminal motif J168_03309 PF01551 Peptidase family M23 J168_03309 PF01476 LysM domain J168_03310 PF16658 Class II release factor RF3, C-terminal domain J168_03310 PF00009 Elongation factor Tu GTP binding domain J168_03311 PF03006 Haemolysin-III related J168_03312 PF05170 AsmA family J168_03313 PF00478 IMP dehydrogenase / GMP reductase domain J168_03313 PF00571 CBS domain J168_03314 PF00535 Glycosyl transferase family 2 J168_03315 PF00912 Transglycosylase J168_03316 PF01430 Hsp33 protein J168_03318 PF00593 TonB dependent receptor J168_03318 PF07715 TonB-dependent Receptor Plug Domain J168_03320 PF00440 Bacterial regulatory proteins, tetR family J168_03321 PF00561 alpha/beta hydrolase fold J168_03322 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J168_03322 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_03322 PF09317 Domain of unknown function (DUF1974) J168_03327 PF01597 Glycine cleavage H-protein J168_03328 PF01571 Aminomethyltransferase folate-binding domain J168_03328 PF08669 Glycine cleavage T-protein C-terminal barrel domain J168_03330 PF16200 C-terminal region of band_7 J168_03330 PF01145 SPFH domain / Band 7 family J168_03331 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J168_03332 PF03819 MazG nucleotide pyrophosphohydrolase domain J168_03333 PF00459 Inositol monophosphatase family J168_03334 PF00293 NUDIX domain J168_03335 PF00202 Aminotransferase class-III J168_03336 PF04452 RNA methyltransferase J168_03337 PF02685 Glucokinase J168_03340 PF01476 LysM domain J168_03340 PF00704 Glycosyl hydrolases family 18 J168_03341 PF07691 PA14 domain J168_03341 PF02838 Glycosyl hydrolase family 20, domain 2 J168_03341 PF00728 Glycosyl hydrolase family 20, catalytic domain J168_03343 PF01915 Glycosyl hydrolase family 3 C-terminal domain J168_03343 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_03343 PF14310 Fibronectin type III-like domain J168_03343 PF07691 PA14 domain J168_03345 PF01301 Glycosyl hydrolases family 35 J168_03346 PF13520 Amino acid permease J168_03348 PF11975 Family 4 glycosyl hydrolase C-terminal domain J168_03348 PF02056 Family 4 glycosyl hydrolase J168_03350 PF17678 Glycosyl hydrolase family 92 N-terminal domain J168_03350 PF07971 Glycosyl hydrolase family 92 J168_03351 PF01301 Glycosyl hydrolases family 35 J168_03357 PF03932 CutC family J168_03358 PF01112 Asparaginase J168_03359 PF13302 Acetyltransferase (GNAT) domain J168_03362 PF00072 Response regulator receiver domain J168_03362 PF01627 Hpt domain J168_03362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03362 PF01584 CheW-like domain J168_03363 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J168_03363 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_03365 PF00072 Response regulator receiver domain J168_03366 PF00072 Response regulator receiver domain J168_03367 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J168_03367 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J168_03369 PF03747 ADP-ribosylglycohydrolase J168_03370 PF00814 Glycoprotease family J168_03371 PF13307 Helicase C-terminal domain J168_03371 PF04851 Type III restriction enzyme, res subunit J168_03373 PF14814 Bifunctional transglycosylase second domain J168_03373 PF00912 Transglycosylase J168_03373 PF00905 Penicillin binding protein transpeptidase domain J168_03374 PF00535 Glycosyl transferase family 2 J168_03376 PF13291 ACT domain J168_03376 PF02824 TGS domain J168_03376 PF04607 Region found in RelA / SpoT proteins J168_03377 PF12706 Beta-lactamase superfamily domain J168_03378 PF03070 TENA/THI-4/PQQC family J168_03379 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J168_03380 PF13186 Iron-sulfur cluster-binding domain J168_03380 PF04055 Radical SAM superfamily J168_03383 PF02685 Glucokinase J168_03385 PF04408 Helicase associated domain (HA2) J168_03385 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J168_03385 PF11898 Domain of unknown function (DUF3418) J168_03385 PF00271 Helicase conserved C-terminal domain J168_03385 PF00270 DEAD/DEAH box helicase J168_03386 PF00210 Ferritin-like domain J168_03387 PF09382 RQC domain J168_03387 PF16124 RecQ zinc-binding J168_03387 PF00570 HRDC domain J168_03387 PF00270 DEAD/DEAH box helicase J168_03387 PF00271 Helicase conserved C-terminal domain J168_03394 PF02203 Tar ligand binding domain homologue J168_03394 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_03394 PF00672 HAMP domain J168_03398 PF13581 Histidine kinase-like ATPase domain J168_03398 PF07536 HWE histidine kinase J168_03398 PF13426 PAS domain J168_03399 PF06508 Queuosine biosynthesis protein QueC J168_03401 PF04055 Radical SAM superfamily J168_03403 PF00691 OmpA family J168_03404 PF07676 WD40-like Beta Propeller Repeat J168_03404 PF04052 TolB amino-terminal domain J168_03406 PF02472 Biopolymer transport protein ExbD/TolR J168_03407 PF01618 MotA/TolQ/ExbB proton channel family J168_03408 PF03061 Thioesterase superfamily J168_03409 PF05496 Holliday junction DNA helicase RuvB P-loop domain J168_03409 PF05491 RuvB C-terminal winged helix domain J168_03409 PF17864 RuvB AAA lid domain J168_03411 PF02705 K+ potassium transporter J168_03412 PF01330 RuvA N terminal domain J168_03412 PF07499 RuvA, C-terminal domain J168_03413 PF02075 Crossover junction endodeoxyribonuclease RuvC J168_03414 PF01709 Transcriptional regulator J168_03417 PF02938 GAD domain J168_03417 PF00152 tRNA synthetases class II (D, K and N) J168_03417 PF01336 OB-fold nucleic acid binding domain J168_03420 PF07690 Major Facilitator Superfamily J168_03423 PF05506 Domain of unknown function (DUF756) J168_03423 PF04185 Phosphoesterase family J168_03426 PF03466 LysR substrate binding domain J168_03426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_03428 PF12848 ABC transporter J168_03428 PF00005 ABC transporter J168_03429 PF00593 TonB dependent receptor J168_03429 PF07715 TonB-dependent Receptor Plug Domain J168_03431 PF00593 TonB dependent receptor J168_03431 PF07715 TonB-dependent Receptor Plug Domain J168_03432 PF07715 TonB-dependent Receptor Plug Domain J168_03432 PF00593 TonB dependent receptor J168_03433 PF00067 Cytochrome P450 J168_03434 PF00999 Sodium/hydrogen exchanger family J168_03434 PF02254 TrkA-N domain J168_03439 PF07715 TonB-dependent Receptor Plug Domain J168_03439 PF00593 TonB dependent receptor J168_03439 PF07660 Secretin and TonB N terminus short domain J168_03441 PF06276 Ferric iron reductase FhuF-like transporter J168_03441 PF04183 IucA / IucC family J168_03442 PF07690 Major Facilitator Superfamily J168_03444 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J168_03444 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J168_03447 PF02654 Cobalamin-5-phosphate synthase J168_03449 PF02277 Phosphoribosyltransferase J168_03450 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J168_03451 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J168_03451 PF07685 CobB/CobQ-like glutamine amidotransferase domain J168_03452 PF00155 Aminotransferase class I and II J168_03454 PF03186 CobD/Cbib protein J168_03454 PF17113 Regulatory signalling modulator protein AmpE J168_03455 PF12557 Cob(I)alamin adenosyltransferase N terminal J168_03455 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J168_03458 PF00593 TonB dependent receptor J168_03458 PF07715 TonB-dependent Receptor Plug Domain J168_03460 PF00004 ATPase family associated with various cellular activities (AAA) J168_03460 PF07724 AAA domain (Cdc48 subfamily) J168_03460 PF17871 AAA lid domain J168_03460 PF10431 C-terminal, D2-small domain, of ClpB protein J168_03460 PF02861 Clp amino terminal domain, pathogenicity island component J168_03461 PF00005 ABC transporter J168_03462 PF00528 Binding-protein-dependent transport system inner membrane component J168_03463 PF09084 NMT1/THI5 like J168_03464 PF00248 Aldo/keto reductase family J168_03466 PF00593 TonB dependent receptor J168_03466 PF07715 TonB-dependent Receptor Plug Domain J168_03467 PF01541 GIY-YIG catalytic domain J168_03474 PF07715 TonB-dependent Receptor Plug Domain J168_03474 PF00593 TonB dependent receptor J168_03475 PF02358 Trehalose-phosphatase J168_03476 PF00723 Glycosyl hydrolases family 15 J168_03477 PF00982 Glycosyltransferase family 20 J168_03478 PF01011 PQQ enzyme repeat J168_03479 PF02203 Tar ligand binding domain homologue J168_03479 PF00672 HAMP domain J168_03479 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_03480 PF04134 Protein of unknown function, DUF393 J168_03483 PF00849 RNA pseudouridylate synthase J168_03484 PF13525 Outer membrane lipoprotein J168_03486 PF02540 NAD synthase J168_03486 PF00795 Carbon-nitrogen hydrolase J168_03488 PF01527 Transposase J168_03489 PF13276 HTH-like domain J168_03489 PF13333 Integrase core domain J168_03489 PF00665 Integrase core domain J168_03492 PF13406 Transglycosylase SLT domain J168_03493 PF13700 Domain of unknown function (DUF4158) J168_03493 PF01526 Tn3 transposase DDE domain J168_03500 PF02796 Helix-turn-helix domain of resolvase J168_03500 PF00665 Integrase core domain J168_03501 PF01695 IstB-like ATP binding protein J168_03507 PF01527 Transposase J168_03508 PF13333 Integrase core domain J168_03508 PF00665 Integrase core domain J168_03508 PF13276 HTH-like domain J168_03514 PF00180 Isocitrate/isopropylmalate dehydrogenase J168_03516 PF00462 Glutaredoxin J168_03517 PF01435 Peptidase family M48 J168_03517 PF13181 Tetratricopeptide repeat J168_03518 PF00072 Response regulator receiver domain J168_03518 PF00486 Transcriptional regulatory protein, C terminal J168_03519 PF00989 PAS fold J168_03519 PF11808 Phosphate regulon sensor protein PhoR J168_03519 PF00512 His Kinase A (phospho-acceptor) domain J168_03519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03520 PF17941 Polyphosphate kinase C-terminal domain 1 J168_03520 PF02503 Polyphosphate kinase middle domain J168_03520 PF13090 Polyphosphate kinase C-terminal domain 2 J168_03520 PF13089 Polyphosphate kinase N-terminal domain J168_03521 PF02541 Ppx/GppA phosphatase family J168_03522 PF00534 Glycosyl transferases group 1 J168_03522 PF13439 Glycosyltransferase Family 4 J168_03523 PF01569 PAP2 superfamily J168_03525 PF00149 Calcineurin-like phosphoesterase J168_03529 PF04305 Protein of unknown function (DUF455) J168_03530 PF00156 Phosphoribosyl transferase domain J168_03533 PF08245 Mur ligase middle domain J168_03533 PF02875 Mur ligase family, glutamate ligase domain J168_03534 PF00300 Histidine phosphatase superfamily (branch 1) J168_03535 PF10459 Peptidase S46 J168_03536 PF10459 Peptidase S46 J168_03537 PF04185 Phosphoesterase family J168_03537 PF05506 Domain of unknown function (DUF756) J168_03539 PF00107 Zinc-binding dehydrogenase J168_03539 PF08240 Alcohol dehydrogenase GroES-like domain J168_03541 PF12857 TOBE-like domain J168_03541 PF17850 CysA C-terminal regulatory domain J168_03541 PF00005 ABC transporter J168_03542 PF00528 Binding-protein-dependent transport system inner membrane component J168_03543 PF00528 Binding-protein-dependent transport system inner membrane component J168_03545 PF00155 Aminotransferase class I and II J168_03547 PF00849 RNA pseudouridylate synthase J168_03549 PF00691 OmpA family J168_03549 PF05736 OprF membrane domain J168_03550 PF00107 Zinc-binding dehydrogenase J168_03550 PF08240 Alcohol dehydrogenase GroES-like domain J168_03551 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_03551 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J168_03553 PF02798 Glutathione S-transferase, N-terminal domain J168_03553 PF00043 Glutathione S-transferase, C-terminal domain J168_03554 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J168_03554 PF00056 lactate/malate dehydrogenase, NAD binding domain J168_03555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J168_03558 PF01425 Amidase J168_03560 PF01474 Class-II DAHP synthetase family J168_03562 PF02600 Disulfide bond formation protein DsbB J168_03563 PF01196 Ribosomal protein L17 J168_03564 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J168_03564 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J168_03564 PF01000 RNA polymerase Rpb3/RpoA insert domain J168_03565 PF01479 S4 domain J168_03565 PF00163 Ribosomal protein S4/S9 N-terminal domain J168_03566 PF00411 Ribosomal protein S11 J168_03567 PF00416 Ribosomal protein S13/S18 J168_03568 PF00344 SecY translocase J168_03569 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J168_03570 PF00327 Ribosomal protein L30p/L7e J168_03571 PF00333 Ribosomal protein S5, N-terminal domain J168_03571 PF03719 Ribosomal protein S5, C-terminal domain J168_03572 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J168_03573 PF00347 Ribosomal protein L6 J168_03574 PF00410 Ribosomal protein S8 J168_03575 PF00253 Ribosomal protein S14p/S29e J168_03576 PF00281 Ribosomal protein L5 J168_03576 PF00673 ribosomal L5P family C-terminus J168_03577 PF00467 KOW motif J168_03577 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J168_03578 PF00238 Ribosomal protein L14p/L23e J168_03579 PF00366 Ribosomal protein S17 J168_03580 PF00831 Ribosomal L29 protein J168_03581 PF00252 Ribosomal protein L16p/L10e J168_03582 PF07650 KH domain J168_03582 PF00189 Ribosomal protein S3, C-terminal domain J168_03583 PF00237 Ribosomal protein L22p/L17e J168_03584 PF00203 Ribosomal protein S19 J168_03585 PF03947 Ribosomal Proteins L2, C-terminal domain J168_03585 PF00181 Ribosomal Proteins L2, RNA binding domain J168_03586 PF00276 Ribosomal protein L23 J168_03587 PF00573 Ribosomal protein L4/L1 family J168_03588 PF00297 Ribosomal protein L3 J168_03589 PF00338 Ribosomal protein S10p/S20e J168_03590 PF03143 Elongation factor Tu C-terminal domain J168_03590 PF03144 Elongation factor Tu domain 2 J168_03590 PF00009 Elongation factor Tu GTP binding domain J168_03591 PF03144 Elongation factor Tu domain 2 J168_03591 PF00679 Elongation factor G C-terminus J168_03591 PF14492 Elongation Factor G, domain II J168_03591 PF03764 Elongation factor G, domain IV J168_03591 PF00009 Elongation factor Tu GTP binding domain J168_03592 PF00177 Ribosomal protein S7p/S5e J168_03593 PF00164 Ribosomal protein S12/S23 J168_03594 PF04983 RNA polymerase Rpb1, domain 3 J168_03594 PF00623 RNA polymerase Rpb1, domain 2 J168_03594 PF05000 RNA polymerase Rpb1, domain 4 J168_03594 PF04998 RNA polymerase Rpb1, domain 5 J168_03594 PF04997 RNA polymerase Rpb1, domain 1 J168_03595 PF00562 RNA polymerase Rpb2, domain 6 J168_03595 PF04561 RNA polymerase Rpb2, domain 2 J168_03595 PF04560 RNA polymerase Rpb2, domain 7 J168_03595 PF04563 RNA polymerase beta subunit J168_03595 PF04565 RNA polymerase Rpb2, domain 3 J168_03595 PF10385 RNA polymerase beta subunit external 1 domain J168_03597 PF00542 Ribosomal protein L7/L12 C-terminal domain J168_03597 PF16320 Ribosomal protein L7/L12 dimerisation domain J168_03598 PF00466 Ribosomal protein L10 J168_03599 PF00687 Ribosomal protein L1p/L10e family J168_03600 PF00298 Ribosomal protein L11, RNA binding domain J168_03600 PF03946 Ribosomal protein L11, N-terminal domain J168_03601 PF00467 KOW motif J168_03601 PF02357 Transcription termination factor nusG J168_03602 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J168_03604 PF00009 Elongation factor Tu GTP binding domain J168_03604 PF03144 Elongation factor Tu domain 2 J168_03604 PF03143 Elongation factor Tu C-terminal domain J168_03608 PF06071 Protein of unknown function (DUF933) J168_03608 PF01926 50S ribosome-binding GTPase J168_03609 PF01195 Peptidyl-tRNA hydrolase J168_03610 PF01386 Ribosomal L25p family J168_03610 PF14693 Ribosomal protein TL5, C-terminal domain J168_03611 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J168_03611 PF14572 Phosphoribosyl synthetase-associated domain J168_03613 PF08544 GHMP kinases C terminal J168_03613 PF00288 GHMP kinases N terminal domain J168_03614 PF03550 Outer membrane lipoprotein LolB J168_03616 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J168_03616 PF01488 Shikimate / quinate 5-dehydrogenase J168_03616 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J168_03617 PF00472 RF-1 domain J168_03617 PF03462 PCRF domain J168_03619 PF00994 Probable molybdopterin binding domain J168_03620 PF03976 Polyphosphate kinase 2 (PPK2) J168_03622 PF00708 Acylphosphatase J168_03623 PF08534 Redoxin J168_03624 PF03631 Virulence factor BrkB J168_03625 PF03358 NADPH-dependent FMN reductase J168_03628 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J168_03628 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J168_03630 PF04073 Aminoacyl-tRNA editing domain J168_03631 PF04151 Bacterial pre-peptidase C-terminal domain J168_03631 PF00082 Subtilase family J168_03632 PF04151 Bacterial pre-peptidase C-terminal domain J168_03632 PF00082 Subtilase family J168_03633 PF00082 Subtilase family J168_03633 PF04151 Bacterial pre-peptidase C-terminal domain J168_03634 PF01063 Amino-transferase class IV J168_03637 PF02233 NAD(P) transhydrogenase beta subunit J168_03638 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J168_03642 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J168_03642 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J168_03642 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J168_03648 PF01612 3'-5' exonuclease J168_03648 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J168_03648 PF01367 5'-3' exonuclease, C-terminal SAM fold J168_03648 PF00476 DNA polymerase family A J168_03649 PF00293 NUDIX domain J168_03651 PF00561 alpha/beta hydrolase fold J168_03652 PF17827 PrmC N-terminal domain J168_03652 PF05175 Methyltransferase small domain J168_03653 PF10417 C-terminal domain of 1-Cys peroxiredoxin J168_03653 PF00578 AhpC/TSA family J168_03654 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_03654 PF13192 Thioredoxin domain J168_03655 PF03466 LysR substrate binding domain J168_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_03656 PF01272 Transcription elongation factor, GreA/GreB, C-term J168_03656 PF14760 Rnk N-terminus J168_03657 PF00923 Transaldolase/Fructose-6-phosphate aldolase J168_03659 PF01625 Peptide methionine sulfoxide reductase J168_03661 PF00196 Bacterial regulatory proteins, luxR family J168_03661 PF00072 Response regulator receiver domain J168_03662 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J168_03662 PF01627 Hpt domain J168_03662 PF00512 His Kinase A (phospho-acceptor) domain J168_03662 PF00072 Response regulator receiver domain J168_03662 PF00672 HAMP domain J168_03662 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03663 PF00990 Diguanylate cyclase, GGDEF domain J168_03663 PF00072 Response regulator receiver domain J168_03666 PF00749 tRNA synthetases class I (E and Q), catalytic domain J168_03666 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J168_03667 PF00892 EamA-like transporter family J168_03670 PF01728 FtsJ-like methyltransferase J168_03670 PF18125 RlmM ferredoxin-like domain J168_03671 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J168_03671 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J168_03672 PF08450 SMP-30/Gluconolactonase/LRE-like region J168_03676 PF00378 Enoyl-CoA hydratase/isomerase J168_03677 PF00171 Aldehyde dehydrogenase family J168_03678 PF00501 AMP-binding enzyme J168_03678 PF13193 AMP-binding enzyme C-terminal domain J168_03679 PF03466 LysR substrate binding domain J168_03679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_03680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J168_03680 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J168_03681 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J168_03682 PF00392 Bacterial regulatory proteins, gntR family J168_03682 PF07729 FCD domain J168_03686 PF01494 FAD binding domain J168_03687 PF01494 FAD binding domain J168_03689 PF01923 Cobalamin adenosyltransferase J168_03690 PF00850 Histone deacetylase domain J168_03693 PF03968 OstA-like protein J168_03693 PF04453 LPS transport system D J168_03694 PF09312 SurA N-terminal domain J168_03694 PF00639 PPIC-type PPIASE domain J168_03695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J168_03696 PF00398 Ribosomal RNA adenine dimethylase J168_03697 PF04379 ApaG domain J168_03698 PF00149 Calcineurin-like phosphoesterase J168_03699 PF00005 ABC transporter J168_03699 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J168_03701 PF00528 Binding-protein-dependent transport system inner membrane component J168_03702 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J168_03703 PF00296 Luciferase-like monooxygenase J168_03707 PF03358 NADPH-dependent FMN reductase J168_03708 PF00296 Luciferase-like monooxygenase J168_03710 PF00528 Binding-protein-dependent transport system inner membrane component J168_03711 PF00005 ABC transporter J168_03712 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J168_03712 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J168_03713 PF00158 Sigma-54 interaction domain J168_03714 PF00186 Dihydrofolate reductase J168_03716 PF00303 Thymidylate synthase J168_03717 PF01790 Prolipoprotein diacylglyceryl transferase J168_03721 PF01219 Prokaryotic diacylglycerol kinase J168_03723 PF00512 His Kinase A (phospho-acceptor) domain J168_03723 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03723 PF08521 Two-component sensor kinase N-terminal J168_03724 PF00072 Response regulator receiver domain J168_03724 PF00486 Transcriptional regulatory protein, C terminal J168_03725 PF13472 GDSL-like Lipase/Acylhydrolase family J168_03726 PF00005 ABC transporter J168_03728 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J168_03730 PF00005 ABC transporter J168_03731 PF00528 Binding-protein-dependent transport system inner membrane component J168_03735 PF07715 TonB-dependent Receptor Plug Domain J168_03735 PF00593 TonB dependent receptor J168_03737 PF00248 Aldo/keto reductase family J168_03738 PF01773 Na+ dependent nucleoside transporter N-terminus J168_03738 PF07670 Nucleoside recognition J168_03738 PF07662 Na+ dependent nucleoside transporter C-terminus J168_03739 PF00294 pfkB family carbohydrate kinase J168_03742 PF01207 Dihydrouridine synthase (Dus) J168_03743 PF13649 Methyltransferase domain J168_03745 PF02772 S-adenosylmethionine synthetase, central domain J168_03745 PF00438 S-adenosylmethionine synthetase, N-terminal domain J168_03745 PF02773 S-adenosylmethionine synthetase, C-terminal domain J168_03746 PF00328 Histidine phosphatase superfamily (branch 2) J168_03751 PF00311 Phosphoenolpyruvate carboxylase J168_03754 PF05221 S-adenosyl-L-homocysteine hydrolase J168_03754 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J168_03755 PF13649 Methyltransferase domain J168_03761 PF00128 Alpha amylase, catalytic domain J168_03762 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J168_03764 PF09286 Pro-kumamolisin, activation domain J168_03764 PF00082 Subtilase family J168_03765 PF14765 Polyketide synthase dehydratase J168_03765 PF00550 Phosphopantetheine attachment site J168_03765 PF08659 KR domain J168_03765 PF08240 Alcohol dehydrogenase GroES-like domain J168_03765 PF00698 Acyl transferase domain J168_03765 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_03765 PF16197 Ketoacyl-synthetase C-terminal extension J168_03765 PF00107 Zinc-binding dehydrogenase J168_03765 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_03768 PF02219 Methylenetetrahydrofolate reductase J168_03770 PF00293 NUDIX domain J168_03771 PF02810 SEC-C motif J168_03771 PF07516 SecA Wing and Scaffold domain J168_03771 PF01043 SecA preprotein cross-linking domain J168_03771 PF07517 SecA DEAD-like domain J168_03772 PF01551 Peptidase family M23 J168_03772 PF01476 LysM domain J168_03772 PF08525 Opacity-associated protein A N-terminal motif J168_03774 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J168_03775 PF12327 FtsZ family, C-terminal domain J168_03775 PF00091 Tubulin/FtsZ family, GTPase domain J168_03776 PF02491 SHS2 domain inserted in FTSA J168_03777 PF08478 POTRA domain, FtsQ-type J168_03777 PF03799 Cell division protein FtsQ J168_03778 PF07478 D-ala D-ala ligase C-terminus J168_03778 PF01820 D-ala D-ala ligase N-terminus J168_03779 PF08245 Mur ligase middle domain J168_03779 PF02875 Mur ligase family, glutamate ligase domain J168_03779 PF01225 Mur ligase family, catalytic domain J168_03780 PF04101 Glycosyltransferase family 28 C-terminal domain J168_03780 PF03033 Glycosyltransferase family 28 N-terminal domain J168_03781 PF03033 Glycosyltransferase family 28 N-terminal domain J168_03781 PF04101 Glycosyltransferase family 28 C-terminal domain J168_03782 PF01098 Cell cycle protein J168_03783 PF00953 Glycosyl transferase family 4 J168_03784 PF08245 Mur ligase middle domain J168_03784 PF02875 Mur ligase family, glutamate ligase domain J168_03784 PF01225 Mur ligase family, catalytic domain J168_03785 PF01225 Mur ligase family, catalytic domain J168_03785 PF08245 Mur ligase middle domain J168_03785 PF02875 Mur ligase family, glutamate ligase domain J168_03786 PF00905 Penicillin binding protein transpeptidase domain J168_03786 PF03717 Penicillin-binding Protein dimerisation domain J168_03787 PF04999 Cell division protein FtsL J168_03788 PF01795 MraW methylase family J168_03789 PF02381 MraZ protein, putative antitoxin-like J168_03795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J168_03797 PF02021 Uncharacterised protein family UPF0102 J168_03798 PF04307 LexA-binding, inner membrane-associated putative hydrolase J168_03799 PF02913 FAD linked oxidases, C-terminal domain J168_03799 PF01565 FAD binding domain J168_03802 PF00486 Transcriptional regulatory protein, C terminal J168_03802 PF00072 Response regulator receiver domain J168_03803 PF13493 Domain of unknown function (DUF4118) J168_03803 PF00512 His Kinase A (phospho-acceptor) domain J168_03803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03803 PF13492 GAF domain J168_03803 PF02702 Osmosensitive K+ channel His kinase sensor domain J168_03804 PF02669 K+-transporting ATPase, c chain J168_03806 PF03814 Potassium-transporting ATPase A subunit J168_03810 PF02769 AIR synthase related protein, C-terminal domain J168_03810 PF00586 AIR synthase related protein, N-terminal domain J168_03811 PF01029 NusB family J168_03812 PF00885 6,7-dimethyl-8-ribityllumazine synthase J168_03813 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J168_03813 PF00925 GTP cyclohydrolase II J168_03814 PF00677 Lumazine binding domain J168_03817 PF01872 RibD C-terminal domain J168_03817 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J168_03819 PF03477 ATP cone domain J168_03820 PF00464 Serine hydroxymethyltransferase J168_03822 PF12848 ABC transporter J168_03822 PF00005 ABC transporter J168_03824 PF00892 EamA-like transporter family J168_03825 PF02567 Phenazine biosynthesis-like protein J168_03826 PF00392 Bacterial regulatory proteins, gntR family J168_03826 PF00155 Aminotransferase class I and II J168_03827 PF00756 Putative esterase J168_03828 PF04828 Glutathione-dependent formaldehyde-activating enzyme J168_03829 PF00107 Zinc-binding dehydrogenase J168_03829 PF08240 Alcohol dehydrogenase GroES-like domain J168_03830 PF02583 Metal-sensitive transcriptional repressor J168_03833 PF00072 Response regulator receiver domain J168_03833 PF00486 Transcriptional regulatory protein, C terminal J168_03834 PF00512 His Kinase A (phospho-acceptor) domain J168_03834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03834 PF00672 HAMP domain J168_03835 PF04107 Glutamate-cysteine ligase family 2(GCS2) J168_03837 PF10996 Beta-Casp domain J168_03837 PF00753 Metallo-beta-lactamase superfamily J168_03837 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J168_03838 PF01926 50S ribosome-binding GTPase J168_03839 PF00034 Cytochrome c J168_03842 PF01323 DSBA-like thioredoxin domain J168_03844 PF02028 BCCT, betaine/carnitine/choline family transporter J168_03845 PF00171 Aldehyde dehydrogenase family J168_03846 PF05199 GMC oxidoreductase J168_03846 PF00732 GMC oxidoreductase J168_03847 PF12627 Probable RNA and SrmB- binding site of polymerase A J168_03847 PF01743 Poly A polymerase head domain J168_03847 PF01966 HD domain J168_03849 PF01979 Amidohydrolase family J168_03850 PF01380 SIS domain J168_03851 PF00356 Bacterial regulatory proteins, lacI family J168_03852 PF07690 Major Facilitator Superfamily J168_03857 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J168_03857 PF00703 Glycosyl hydrolases family 2 J168_03857 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J168_03857 PF16355 Domain of unknown function (DUF4982) J168_03857 PF02837 Glycosyl hydrolases family 2, sugar binding domain J168_03862 PF03934 Type II secretion system (T2SS), protein K J168_03863 PF07963 Prokaryotic N-terminal methylation motif J168_03863 PF11612 Type II secretion system (T2SS), protein J J168_03865 PF12019 Type II transport protein GspH J168_03865 PF07963 Prokaryotic N-terminal methylation motif J168_03866 PF08334 Type II secretion system (T2SS), protein G J168_03866 PF07963 Prokaryotic N-terminal methylation motif J168_03867 PF00482 Type II secretion system (T2SS), protein F J168_03868 PF00437 Type II/IV secretion system protein J168_03869 PF03958 Bacterial type II/III secretion system short domain J168_03869 PF00263 Bacterial type II and III secretion system protein J168_03878 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J168_03879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03879 PF00512 His Kinase A (phospho-acceptor) domain J168_03880 PF00072 Response regulator receiver domain J168_03881 PF08446 PAS fold J168_03881 PF00360 Phytochrome region J168_03881 PF00512 His Kinase A (phospho-acceptor) domain J168_03881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03881 PF01590 GAF domain J168_03882 PF04972 BON domain J168_03883 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J168_03883 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J168_03884 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J168_03884 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J168_03891 PF00293 NUDIX domain J168_03891 PF01467 Cytidylyltransferase-like J168_03893 PF03466 LysR substrate binding domain J168_03893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_03895 PF11818 C-terminal domain of tail specific protease (DUF3340) J168_03895 PF03572 Peptidase family S41 J168_03895 PF00595 PDZ domain J168_03895 PF17804 Tail specific protease N-terminal domain J168_03896 PF04055 Radical SAM superfamily J168_03896 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J168_03897 PF03099 Biotin/lipoate A/B protein ligase family J168_03898 PF04359 Protein of unknown function (DUF493) J168_03900 PF07943 Penicillin-binding protein 5, C-terminal domain J168_03900 PF00768 D-alanyl-D-alanine carboxypeptidase J168_03901 PF03330 Lytic transglycolase J168_03901 PF05036 Sporulation related domain J168_03902 PF13406 Transglycosylase SLT domain J168_03903 PF00295 Glycosyl hydrolases family 28 J168_03904 PF01098 Cell cycle protein J168_03905 PF00905 Penicillin binding protein transpeptidase domain J168_03905 PF03717 Penicillin-binding Protein dimerisation domain J168_03907 PF04085 rod shape-determining protein MreC J168_03909 PF00294 pfkB family carbohydrate kinase J168_03910 PF02954 Bacterial regulatory protein, Fis family J168_03910 PF01590 GAF domain J168_03910 PF00158 Sigma-54 interaction domain J168_03912 PF08240 Alcohol dehydrogenase GroES-like domain J168_03912 PF00107 Zinc-binding dehydrogenase J168_03915 PF00497 Bacterial extracellular solute-binding proteins, family 3 J168_03916 PF13360 PQQ-like domain J168_03919 PF11838 ERAP1-like C-terminal domain J168_03919 PF01433 Peptidase family M1 domain J168_03920 PF00563 EAL domain J168_03920 PF03707 Bacterial signalling protein N terminal repeat J168_03920 PF00990 Diguanylate cyclase, GGDEF domain J168_03921 PF01209 ubiE/COQ5 methyltransferase family J168_03923 PF13533 Biotin-lipoyl like J168_03924 PF13673 Acetyltransferase (GNAT) domain J168_03926 PF07724 AAA domain (Cdc48 subfamily) J168_03926 PF00004 ATPase family associated with various cellular activities (AAA) J168_03926 PF10431 C-terminal, D2-small domain, of ClpB protein J168_03927 PF00227 Proteasome subunit J168_03928 PF00589 Phage integrase family J168_03928 PF02899 Phage integrase, N-terminal SAM-like domain J168_03930 PF01678 Diaminopimelate epimerase J168_03932 PF04304 Protein of unknown function (DUF454) J168_03933 PF00326 Prolyl oligopeptidase family J168_03933 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J168_03934 PF00155 Aminotransferase class I and II J168_03936 PF00326 Prolyl oligopeptidase family J168_03936 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J168_03941 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J168_03941 PF03900 Porphobilinogen deaminase, C-terminal domain J168_03942 PF04397 LytTr DNA-binding domain J168_03942 PF00072 Response regulator receiver domain J168_03943 PF07694 5TMR of 5TMR-LYT J168_03943 PF06580 Histidine kinase J168_03945 PF13632 Glycosyl transferase family group 2 J168_03948 PF08448 PAS fold J168_03948 PF00990 Diguanylate cyclase, GGDEF domain J168_03949 PF01740 STAS domain J168_03949 PF00916 Sulfate permease family J168_03950 PF00150 Cellulase (glycosyl hydrolase family 5) J168_03950 PF00553 Cellulose binding domain J168_03951 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_03951 PF02203 Tar ligand binding domain homologue J168_03951 PF00672 HAMP domain J168_03952 PF00563 EAL domain J168_03952 PF08448 PAS fold J168_03952 PF08447 PAS fold J168_03952 PF00990 Diguanylate cyclase, GGDEF domain J168_03957 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J168_03957 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J168_03959 PF01204 Trehalase J168_03961 PF01544 CorA-like Mg2+ transporter protein J168_03963 PF00324 Amino acid permease J168_03965 PF01695 IstB-like ATP binding protein J168_03966 PF02796 Helix-turn-helix domain of resolvase J168_03966 PF00665 Integrase core domain J168_03967 PF00497 Bacterial extracellular solute-binding proteins, family 3 J168_03968 PF00892 EamA-like transporter family J168_03973 PF05230 MASE2 domain J168_03973 PF00990 Diguanylate cyclase, GGDEF domain J168_03974 PF07759 Protein of unknown function (DUF1615) J168_03975 PF00326 Prolyl oligopeptidase family J168_03975 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J168_03976 PF12823 Domain of unknown function (DUF3817) J168_03976 PF03176 MMPL family J168_03981 PF13409 Glutathione S-transferase, N-terminal domain J168_03986 PF04002 RadC-like JAB domain J168_03991 PF00072 Response regulator receiver domain J168_03991 PF13426 PAS domain J168_03991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_03992 PF02796 Helix-turn-helix domain of resolvase J168_03992 PF00665 Integrase core domain J168_03993 PF01695 IstB-like ATP binding protein J168_03998 PF00873 AcrB/AcrD/AcrF family J168_03999 PF00529 HlyD membrane-fusion protein of T1SS J168_03999 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_04000 PF00009 Elongation factor Tu GTP binding domain J168_04001 PF01507 Phosphoadenosine phosphosulfate reductase family J168_04002 PF00667 FAD binding domain J168_04002 PF00175 Oxidoreductase NAD-binding domain J168_04002 PF00258 Flavodoxin J168_04003 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J168_04003 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J168_04004 PF01507 Phosphoadenosine phosphosulfate reductase family J168_04008 PF01627 Hpt domain J168_04008 PF00512 His Kinase A (phospho-acceptor) domain J168_04008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04008 PF00072 Response regulator receiver domain J168_04010 PF03466 LysR substrate binding domain J168_04010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04011 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J168_04011 PF14824 Sirohaem biosynthesis protein central J168_04011 PF10414 Sirohaem synthase dimerisation region J168_04012 PF00291 Pyridoxal-phosphate dependent enzyme J168_04014 PF01661 Macro domain J168_04015 PF00274 Fructose-bisphosphate aldolase class-I J168_04016 PF02887 Pyruvate kinase, alpha/beta domain J168_04016 PF00224 Pyruvate kinase, barrel domain J168_04018 PF00162 Phosphoglycerate kinase J168_04023 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J168_04023 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J168_04025 PF03922 OmpW family J168_04026 PF03922 OmpW family J168_04028 PF00753 Metallo-beta-lactamase superfamily J168_04028 PF04273 Putative phosphatase (DUF442) J168_04030 PF00528 Binding-protein-dependent transport system inner membrane component J168_04031 PF03459 TOBE domain J168_04031 PF00005 ABC transporter J168_04038 PF03734 L,D-transpeptidase catalytic domain J168_04038 PF01476 LysM domain J168_04039 PF01551 Peptidase family M23 J168_04039 PF04225 Opacity-associated protein A LysM-like domain J168_04041 PF07715 TonB-dependent Receptor Plug Domain J168_04041 PF00593 TonB dependent receptor J168_04042 PF12146 Serine aminopeptidase, S33 J168_04043 PF00456 Transketolase, thiamine diphosphate binding domain J168_04043 PF02779 Transketolase, pyrimidine binding domain J168_04043 PF02780 Transketolase, C-terminal domain J168_04044 PF00375 Sodium:dicarboxylate symporter family J168_04046 PF00092 von Willebrand factor type A domain J168_04046 PF07584 Aerotolerance regulator N-terminal J168_04050 PF07726 ATPase family associated with various cellular activities (AAA) J168_04050 PF17863 AAA lid domain J168_04052 PF07660 Secretin and TonB N terminus short domain J168_04052 PF03958 Bacterial type II/III secretion system short domain J168_04052 PF00263 Bacterial type II and III secretion system protein J168_04052 PF11741 AMIN domain J168_04057 PF17092 Penicillin-binding protein OB-like domain J168_04057 PF00905 Penicillin binding protein transpeptidase domain J168_04057 PF00912 Transglycosylase J168_04060 PF00285 Citrate synthase, C-terminal domain J168_04061 PF01197 Ribosomal protein L31 J168_04062 PF01156 Inosine-uridine preferring nucleoside hydrolase J168_04063 PF00270 DEAD/DEAH box helicase J168_04063 PF00271 Helicase conserved C-terminal domain J168_04063 PF17191 RecG wedge domain J168_04064 PF01042 Endoribonuclease L-PSP J168_04065 PF04607 Region found in RelA / SpoT proteins J168_04065 PF13291 ACT domain J168_04065 PF02824 TGS domain J168_04066 PF01192 RNA polymerase Rpb6 J168_04067 PF00625 Guanylate kinase J168_04068 PF03755 YicC-like family, N-terminal region J168_04068 PF08340 Domain of unknown function (DUF1732) J168_04069 PF01138 3' exoribonuclease family, domain 1 J168_04069 PF03725 3' exoribonuclease family, domain 2 J168_04071 PF01725 Ham1 family J168_04072 PF06969 HemN C-terminal domain J168_04072 PF04055 Radical SAM superfamily J168_04075 PF00557 Metallopeptidase family M24 J168_04077 PF00557 Metallopeptidase family M24 J168_04077 PF05195 Aminopeptidase P, N-terminal domain J168_04078 PF03695 Uncharacterised protein family (UPF0149) J168_04080 PF05164 Cell division protein ZapA J168_04082 PF01812 5-formyltetrahydrofolate cyclo-ligase family J168_04084 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J168_04086 PF13369 Transglutaminase-like superfamily J168_04087 PF00301 Rubredoxin J168_04088 PF02581 Thiamine monophosphate synthase J168_04091 PF00202 Aminotransferase class-III J168_04092 PF17874 MalT-like TPR region J168_04092 PF00196 Bacterial regulatory proteins, luxR family J168_04093 PF00127 Copper binding proteins, plastocyanin/azurin family J168_04094 PF00155 Aminotransferase class I and II J168_04096 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J168_04096 PF00034 Cytochrome c J168_04097 PF01593 Flavin containing amine oxidoreductase J168_04100 PF00202 Aminotransferase class-III J168_04101 PF00520 Ion transport protein J168_04101 PF00027 Cyclic nucleotide-binding domain J168_04104 PF01569 PAP2 superfamily J168_04105 PF01062 Bestrophin, RFP-TM, chloride channel J168_04107 PF01225 Mur ligase family, catalytic domain J168_04107 PF02875 Mur ligase family, glutamate ligase domain J168_04107 PF08245 Mur ligase middle domain J168_04109 PF00365 Phosphofructokinase J168_04111 PF03030 Inorganic H+ pyrophosphatase J168_04113 PF00719 Inorganic pyrophosphatase J168_04115 PF00593 TonB dependent receptor J168_04115 PF07715 TonB-dependent Receptor Plug Domain J168_04116 PF12833 Helix-turn-helix domain J168_04117 PF00486 Transcriptional regulatory protein, C terminal J168_04117 PF18500 CadC C-terminal domain 1 J168_04118 PF13667 ThiC-associated domain J168_04118 PF01964 Radical SAM ThiC family J168_04120 PF07715 TonB-dependent Receptor Plug Domain J168_04120 PF00593 TonB dependent receptor J168_04121 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_04121 PF02203 Tar ligand binding domain homologue J168_04121 PF00672 HAMP domain J168_04123 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J168_04123 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J168_04124 PF00205 Thiamine pyrophosphate enzyme, central domain J168_04124 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J168_04124 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J168_04126 PF00291 Pyridoxal-phosphate dependent enzyme J168_04127 PF00682 HMGL-like J168_04127 PF08502 LeuA allosteric (dimerisation) domain J168_04128 PF00180 Isocitrate/isopropylmalate dehydrogenase J168_04129 PF00694 Aconitase C-terminal domain J168_04130 PF00330 Aconitase family (aconitate hydratase) J168_04131 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04132 PF17151 Periplasmic sensor domain J168_04132 PF00990 Diguanylate cyclase, GGDEF domain J168_04135 PF02321 Outer membrane efflux protein J168_04136 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J168_04137 PF03279 Bacterial lipid A biosynthesis acyltransferase J168_04143 PF01515 Phosphate acetyl/butaryl transferase J168_04143 PF00390 Malic enzyme, N-terminal domain J168_04143 PF03949 Malic enzyme, NAD binding domain J168_04144 PF00375 Sodium:dicarboxylate symporter family J168_04146 PF00512 His Kinase A (phospho-acceptor) domain J168_04146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04146 PF02743 Cache domain J168_04147 PF07690 Major Facilitator Superfamily J168_04149 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04149 PF03466 LysR substrate binding domain J168_04150 PF00248 Aldo/keto reductase family J168_04154 PF00196 Bacterial regulatory proteins, luxR family J168_04154 PF00072 Response regulator receiver domain J168_04156 PF00512 His Kinase A (phospho-acceptor) domain J168_04156 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04156 PF08521 Two-component sensor kinase N-terminal J168_04157 PF00486 Transcriptional regulatory protein, C terminal J168_04157 PF00072 Response regulator receiver domain J168_04159 PF03600 Citrate transporter J168_04161 PF00106 short chain dehydrogenase J168_04162 PF00356 Bacterial regulatory proteins, lacI family J168_04165 PF00128 Alpha amylase, catalytic domain J168_04168 PF03193 RsgA GTPase J168_04172 PF00593 TonB dependent receptor J168_04172 PF07715 TonB-dependent Receptor Plug Domain J168_04173 PF01522 Polysaccharide deacetylase J168_04174 PF00462 Glutaredoxin J168_04177 PF01527 Transposase J168_04182 PF02645 Uncharacterised protein, DegV family COG1307 J168_04183 PF01327 Polypeptide deformylase J168_04184 PF03960 ArsC family J168_04187 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J168_04188 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J168_04189 PF01270 Glycosyl hydrolases family 8 J168_04190 PF03170 Bacterial cellulose synthase subunit J168_04191 PF00535 Glycosyl transferase family 2 J168_04191 PF03552 Cellulose synthase J168_04191 PF07238 PilZ domain J168_04194 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J168_04194 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J168_04201 PF07715 TonB-dependent Receptor Plug Domain J168_04201 PF00593 TonB dependent receptor J168_04203 PF07702 UTRA domain J168_04203 PF00392 Bacterial regulatory proteins, gntR family J168_04205 PF00263 Bacterial type II and III secretion system protein J168_04205 PF03958 Bacterial type II/III secretion system short domain J168_04207 PF10741 Type II secretion system (T2SS), protein M subtype b J168_04208 PF05137 Fimbrial assembly protein (PilN) J168_04209 PF03934 Type II secretion system (T2SS), protein K J168_04211 PF07963 Prokaryotic N-terminal methylation motif J168_04212 PF12019 Type II transport protein GspH J168_04213 PF08334 Type II secretion system (T2SS), protein G J168_04214 PF00482 Type II secretion system (T2SS), protein F J168_04215 PF00437 Type II/IV secretion system protein J168_04215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J168_04216 PF04151 Bacterial pre-peptidase C-terminal domain J168_04216 PF00082 Subtilase family J168_04217 PF03895 YadA-like membrane anchor domain J168_04217 PF05658 Head domain of trimeric autotransporter adhesin J168_04217 PF13018 Extended Signal Peptide of Type V secretion system J168_04217 PF05662 Coiled stalk of trimeric autotransporter adhesin J168_04218 PF04151 Bacterial pre-peptidase C-terminal domain J168_04218 PF00082 Subtilase family J168_04219 PF05658 Head domain of trimeric autotransporter adhesin J168_04219 PF05662 Coiled stalk of trimeric autotransporter adhesin J168_04219 PF03895 YadA-like membrane anchor domain J168_04219 PF13018 Extended Signal Peptide of Type V secretion system J168_04220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J168_04220 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J168_04220 PF02769 AIR synthase related protein, C-terminal domain J168_04221 PF13098 Thioredoxin-like domain J168_04221 PF10411 Disulfide bond isomerase protein N-terminus J168_04222 PF00589 Phage integrase family J168_04222 PF02899 Phage integrase, N-terminal SAM-like domain J168_04225 PF03739 Lipopolysaccharide export system permease LptF/LptG J168_04227 PF02789 Cytosol aminopeptidase family, N-terminal domain J168_04227 PF00883 Cytosol aminopeptidase family, catalytic domain J168_04230 PF10458 Valyl tRNA synthetase tRNA binding arm J168_04230 PF08264 Anticodon-binding domain of tRNA J168_04230 PF00133 tRNA synthetases class I (I, L, M and V) J168_04231 PF07715 TonB-dependent Receptor Plug Domain J168_04231 PF00593 TonB dependent receptor J168_04232 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J168_04232 PF01464 Transglycosylase SLT domain J168_04233 PF00544 Pectate lyase J168_04236 PF01066 CDP-alcohol phosphatidyltransferase J168_04238 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J168_04238 PF04073 Aminoacyl-tRNA editing domain J168_04238 PF03129 Anticodon binding domain J168_04239 PF00816 H-NS histone family J168_04241 PF02405 Permease MlaE J168_04242 PF00005 ABC transporter J168_04243 PF03886 ABC-type transport auxiliary lipoprotein component J168_04243 PF02470 MlaD protein J168_04247 PF05045 Rhamnan synthesis protein F J168_04247 PF14307 Glycosyltransferase WbsX J168_04248 PF01144 Coenzyme A transferase J168_04249 PF01144 Coenzyme A transferase J168_04250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J168_04250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J168_04250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J168_04250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J168_04251 PF00483 Nucleotidyl transferase J168_04251 PF01050 Mannose-6-phosphate isomerase J168_04252 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J168_04252 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J168_04252 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J168_04253 PF04321 RmlD substrate binding domain J168_04254 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J168_04255 PF00483 Nucleotidyl transferase J168_04256 PF16363 GDP-mannose 4,6 dehydratase J168_04257 PF01012 Electron transfer flavoprotein domain J168_04258 PF01012 Electron transfer flavoprotein domain J168_04258 PF00766 Electron transfer flavoprotein FAD-binding domain J168_04260 PF01040 UbiA prenyltransferase family J168_04261 PF01565 FAD binding domain J168_04261 PF04030 D-arabinono-1,4-lactone oxidase J168_04262 PF00106 short chain dehydrogenase J168_04264 PF01370 NAD dependent epimerase/dehydratase family J168_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_04265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J168_04268 PF01209 ubiE/COQ5 methyltransferase family J168_04270 PF14307 Glycosyltransferase WbsX J168_04270 PF05045 Rhamnan synthesis protein F J168_04271 PF00535 Glycosyl transferase family 2 J168_04272 PF00132 Bacterial transferase hexapeptide (six repeats) J168_04273 PF00005 ABC transporter J168_04275 PF01053 Cys/Met metabolism PLP-dependent enzyme J168_04276 PF00291 Pyridoxal-phosphate dependent enzyme J168_04276 PF00571 CBS domain J168_04280 PF00437 Type II/IV secretion system protein J168_04281 PF02798 Glutathione S-transferase, N-terminal domain J168_04281 PF14497 Glutathione S-transferase, C-terminal domain J168_04283 PF00271 Helicase conserved C-terminal domain J168_04283 PF00270 DEAD/DEAH box helicase J168_04285 PF07715 TonB-dependent Receptor Plug Domain J168_04285 PF00593 TonB dependent receptor J168_04286 PF01242 6-pyruvoyl tetrahydropterin synthase J168_04289 PF13185 GAF domain J168_04291 PF00756 Putative esterase J168_04292 PF00593 TonB dependent receptor J168_04292 PF07715 TonB-dependent Receptor Plug Domain J168_04293 PF13419 Haloacid dehalogenase-like hydrolase J168_04294 PF00817 impB/mucB/samB family J168_04294 PF11799 impB/mucB/samB family C-terminal domain J168_04295 PF07977 FabA-like domain J168_04296 PF02801 Beta-ketoacyl synthase, C-terminal domain J168_04296 PF00109 Beta-ketoacyl synthase, N-terminal domain J168_04298 PF01432 Peptidase family M3 J168_04301 PF07732 Multicopper oxidase J168_04301 PF07731 Multicopper oxidase J168_04301 PF00394 Multicopper oxidase J168_04302 PF05275 Copper resistance protein B precursor (CopB) J168_04303 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J168_04308 PF01380 SIS domain J168_04309 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_04310 PF02687 FtsX-like permease family J168_04310 PF00005 ABC transporter J168_04310 PF12704 MacB-like periplasmic core domain J168_04311 PF12704 MacB-like periplasmic core domain J168_04311 PF02687 FtsX-like permease family J168_04312 PF02687 FtsX-like permease family J168_04312 PF12704 MacB-like periplasmic core domain J168_04314 PF02954 Bacterial regulatory protein, Fis family J168_04314 PF00072 Response regulator receiver domain J168_04314 PF00158 Sigma-54 interaction domain J168_04315 PF00512 His Kinase A (phospho-acceptor) domain J168_04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04316 PF00132 Bacterial transferase hexapeptide (six repeats) J168_04316 PF14602 Hexapeptide repeat of succinyl-transferase J168_04316 PF12804 MobA-like NTP transferase domain J168_04320 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J168_04320 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J168_04321 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J168_04321 PF02874 ATP synthase alpha/beta family, beta-barrel domain J168_04322 PF00231 ATP synthase J168_04323 PF02874 ATP synthase alpha/beta family, beta-barrel domain J168_04323 PF00306 ATP synthase alpha/beta chain, C terminal domain J168_04323 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J168_04324 PF00213 ATP synthase delta (OSCP) subunit J168_04325 PF00430 ATP synthase B/B' CF(0) J168_04326 PF00137 ATP synthase subunit C J168_04327 PF00119 ATP synthase A chain J168_04331 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_04331 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J168_04333 PF02817 e3 binding domain J168_04333 PF00364 Biotin-requiring enzyme J168_04333 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J168_04339 PF03180 NLPA lipoprotein J168_04340 PF00528 Binding-protein-dependent transport system inner membrane component J168_04341 PF00005 ABC transporter J168_04341 PF09383 NIL domain J168_04342 PF00892 EamA-like transporter family J168_04343 PF04461 Protein of unknown function (DUF520) J168_04345 PF00072 Response regulator receiver domain J168_04345 PF00512 His Kinase A (phospho-acceptor) domain J168_04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04345 PF00989 PAS fold J168_04345 PF01627 Hpt domain J168_04345 PF18415 Histidine kinase receptor ArcB trans-membrane domain J168_04350 PF13419 Haloacid dehalogenase-like hydrolase J168_04351 PF00849 RNA pseudouridylate synthase J168_04351 PF01479 S4 domain J168_04352 PF05175 Methyltransferase small domain J168_04352 PF08468 Methyltransferase small domain N-terminal J168_04354 PF07995 Glucose / Sorbosone dehydrogenase J168_04356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04356 PF00989 PAS fold J168_04356 PF00512 His Kinase A (phospho-acceptor) domain J168_04360 PF01168 Alanine racemase, N-terminal domain J168_04360 PF00842 Alanine racemase, C-terminal domain J168_04361 PF01266 FAD dependent oxidoreductase J168_04362 PF01037 Lrp/AsnC ligand binding domain J168_04364 PF01641 SelR domain J168_04366 PF01618 MotA/TolQ/ExbB proton channel family J168_04367 PF13677 Membrane MotB of proton-channel complex MotA/MotB J168_04367 PF00691 OmpA family J168_04372 PF01061 ABC-2 type transporter J168_04373 PF00005 ABC transporter J168_04374 PF00999 Sodium/hydrogen exchanger family J168_04375 PF02469 Fasciclin domain J168_04376 PF03167 Uracil DNA glycosylase superfamily J168_04378 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J168_04380 PF03466 LysR substrate binding domain J168_04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04381 PF03358 NADPH-dependent FMN reductase J168_04382 PF00248 Aldo/keto reductase family J168_04384 PF05649 Peptidase family M13 J168_04384 PF01431 Peptidase family M13 J168_04388 PF13520 Amino acid permease J168_04390 PF00072 Response regulator receiver domain J168_04390 PF04397 LytTr DNA-binding domain J168_04391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J168_04391 PF06580 Histidine kinase J168_04391 PF02743 Cache domain J168_04391 PF00672 HAMP domain J168_04394 PF05974 Domain of unknown function (DUF892) J168_04395 PF05067 Manganese containing catalase J168_04398 PF03705 CheR methyltransferase, all-alpha domain J168_04398 PF01739 CheR methyltransferase, SAM binding domain J168_04398 PF08448 PAS fold J168_04398 PF01339 CheB methylesterase J168_04401 PF02954 Bacterial regulatory protein, Fis family J168_04401 PF00072 Response regulator receiver domain J168_04401 PF00158 Sigma-54 interaction domain J168_04403 PF01654 Cytochrome bd terminal oxidase subunit I J168_04404 PF02322 Cytochrome bd terminal oxidase subunit II J168_04408 PF16363 GDP-mannose 4,6 dehydratase J168_04410 PF03275 UDP-galactopyranose mutase J168_04412 PF00664 ABC transporter transmembrane region J168_04412 PF00005 ABC transporter J168_04415 PF13823 Alcohol dehydrogenase GroES-associated J168_04415 PF00107 Zinc-binding dehydrogenase J168_04415 PF08240 Alcohol dehydrogenase GroES-like domain J168_04424 PF07715 TonB-dependent Receptor Plug Domain J168_04424 PF00593 TonB dependent receptor J168_04427 PF00005 ABC transporter J168_04429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04429 PF03466 LysR substrate binding domain J168_04430 PF01042 Endoribonuclease L-PSP J168_04433 PF02203 Tar ligand binding domain homologue J168_04433 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J168_04433 PF00672 HAMP domain J168_04437 PF02525 Flavodoxin-like fold J168_04446 PF00557 Metallopeptidase family M24 J168_04449 PF01695 IstB-like ATP binding protein J168_04450 PF00665 Integrase core domain J168_04450 PF02796 Helix-turn-helix domain of resolvase J168_04451 PF01527 Transposase J168_04452 PF13333 Integrase core domain J168_04452 PF00665 Integrase core domain J168_04452 PF13276 HTH-like domain J168_04455 PF00717 Peptidase S24-like J168_04456 PF00817 impB/mucB/samB family J168_04456 PF13438 Domain of unknown function (DUF4113) J168_04456 PF11798 IMS family HHH motif J168_04456 PF11799 impB/mucB/samB family C-terminal domain J168_04460 PF01555 DNA methylase J168_04470 PF00182 Chitinase class I J168_04495 PF01695 IstB-like ATP binding protein J168_04496 PF02796 Helix-turn-helix domain of resolvase J168_04496 PF00665 Integrase core domain J168_04512 PF03979 Sigma-70 factor, region 1.1 J168_04512 PF04545 Sigma-70, region 4 J168_04512 PF04539 Sigma-70 region 3 J168_04512 PF00140 Sigma-70 factor, region 1.2 J168_04512 PF04542 Sigma-70 region 2 J168_04512 PF04546 Sigma-70, non-essential region J168_04513 PF02580 D-Tyr-tRNA(Tyr) deacylase J168_04514 PF03279 Bacterial lipid A biosynthesis acyltransferase J168_04516 PF00925 GTP cyclohydrolase II J168_04520 PF00535 Glycosyl transferase family 2 J168_04523 PF01189 16S rRNA methyltransferase RsmB/F J168_04523 PF01029 NusB family J168_04524 PF00551 Formyl transferase J168_04524 PF02911 Formyl transferase, C-terminal domain J168_04525 PF01327 Polypeptide deformylase J168_04526 PF01476 LysM domain J168_04527 PF17782 DprA winged helix domain J168_04527 PF02481 DNA recombination-mediator protein A J168_04528 PF04361 Protein of unknown function (DUF494) J168_04529 PF07963 Prokaryotic N-terminal methylation motif J168_04529 PF00114 Pilin (bacterial filament) J168_04531 PF13368 Topoisomerase C-terminal repeat J168_04531 PF01131 DNA topoisomerase J168_04531 PF01751 Toprim domain J168_04532 PF01300 Telomere recombination J168_04537 PF01343 Peptidase family S49 J168_04538 PF01554 MatE J168_04542 PF00271 Helicase conserved C-terminal domain J168_04542 PF00270 DEAD/DEAH box helicase J168_04542 PF18074 Primosomal protein N C-terminal domain J168_04542 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J168_04542 PF17764 3′ DNA-binding domain (3′BD) J168_04543 PF00043 Glutathione S-transferase, C-terminal domain J168_04543 PF13417 Glutathione S-transferase, N-terminal domain J168_04546 PF07992 Pyridine nucleotide-disulphide oxidoreductase J168_04547 PF03458 UPF0126 domain J168_04548 PF04545 Sigma-70, region 4 J168_04548 PF04542 Sigma-70 region 2 J168_04549 PF03167 Uracil DNA glycosylase superfamily J168_04550 PF01339 CheB methylesterase J168_04550 PF00072 Response regulator receiver domain J168_04551 PF18075 FtsX extracellular domain J168_04552 PF00005 ABC transporter J168_04553 PF00270 DEAD/DEAH box helicase J168_04553 PF12300 ATP-dependent RNA helicase RhlB J168_04553 PF00271 Helicase conserved C-terminal domain J168_04554 PF00085 Thioredoxin J168_04555 PF07498 Rho termination factor, N-terminal domain J168_04555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J168_04555 PF07497 Rho termination factor, RNA-binding domain J168_04556 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J168_04557 PF03466 LysR substrate binding domain J168_04557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04559 PF03971 Monomeric isocitrate dehydrogenase J168_04562 PF09704 CRISPR-associated protein (Cas_Cas5) J168_04563 PF09704 CRISPR-associated protein (Cas_Cas5) J168_04567 PF01867 CRISPR associated protein Cas1 J168_04568 PF00665 Integrase core domain J168_04568 PF02796 Helix-turn-helix domain of resolvase J168_04569 PF01695 IstB-like ATP binding protein J168_04571 PF04972 BON domain J168_04571 PF01476 LysM domain J168_04572 PF14489 QueF-like protein J168_04572 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J168_04573 PF07687 Peptidase dimerisation domain J168_04573 PF01546 Peptidase family M20/M25/M40 J168_04574 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_04575 PF00873 AcrB/AcrD/AcrF family J168_04576 PF00873 AcrB/AcrD/AcrF family J168_04577 PF07063 Domain of unknown function (DUF1338) J168_04585 PF01427 D-ala-D-ala dipeptidase J168_04586 PF01510 N-acetylmuramoyl-L-alanine amidase J168_04588 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J168_04588 PF13378 Enolase C-terminal domain-like J168_04590 PF13520 Amino acid permease J168_04593 PF05360 yiaA/B two helix domain J168_04594 PF07995 Glucose / Sorbosone dehydrogenase J168_04595 PF01915 Glycosyl hydrolase family 3 C-terminal domain J168_04595 PF00933 Glycosyl hydrolase family 3 N terminal domain J168_04595 PF14310 Fibronectin type III-like domain J168_04596 PF02152 Dihydroneopterin aldolase J168_04597 PF00814 Glycoprotease family J168_04598 PF01165 Ribosomal protein S21 J168_04599 PF09424 Yqey-like protein J168_04600 PF03631 Virulence factor BrkB J168_04601 PF08275 DNA primase catalytic core, N-terminal domain J168_04601 PF08278 DNA primase DnaG DnaB-binding J168_04601 PF01807 CHC2 zinc finger J168_04601 PF10410 DnaB-helicase binding domain of primase J168_04602 PF13593 SBF-like CPA transporter family (DUF4137) J168_04604 PF01040 UbiA prenyltransferase family J168_04609 PF00510 Cytochrome c oxidase subunit III J168_04610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J168_04612 PF00115 Cytochrome C and Quinol oxidase polypeptide I J168_04615 PF01619 Proline dehydrogenase J168_04615 PF00171 Aldehyde dehydrogenase family J168_04615 PF14850 DNA-binding domain of Proline dehydrogenase J168_04615 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J168_04623 PF03594 Benzoate membrane transport protein J168_04624 PF01590 GAF domain J168_04624 PF13426 PAS domain J168_04624 PF00360 Phytochrome region J168_04624 PF08446 PAS fold J168_04625 PF01126 Heme oxygenase J168_04626 PF07690 Major Facilitator Superfamily J168_04627 PF01263 Aldose 1-epimerase J168_04629 PF02810 SEC-C motif J168_04630 PF01925 Sulfite exporter TauE/SafE J168_04635 PF01227 GTP cyclohydrolase I J168_04637 PF07869 Protein of unknown function (DUF1656) J168_04638 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J168_04638 PF00529 HlyD membrane-fusion protein of T1SS J168_04639 PF02321 Outer membrane efflux protein J168_04640 PF04632 Fusaric acid resistance protein family J168_04641 PF00083 Sugar (and other) transporter J168_04642 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J168_04643 PF13091 PLD-like domain J168_04643 PF13396 Phospholipase_D-nuclease N-terminal J168_04648 PF01850 PIN domain J168_04653 PF00849 RNA pseudouridylate synthase J168_04655 PF01527 Transposase J168_04656 PF13276 HTH-like domain J168_04656 PF00665 Integrase core domain J168_04656 PF13333 Integrase core domain J168_04659 PF02785 Biotin carboxylase C-terminal domain J168_04659 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J168_04659 PF00289 Biotin carboxylase, N-terminal domain J168_04660 PF01425 Amidase J168_04667 PF13538 UvrD-like helicase C-terminal domain J168_04670 PF12705 PD-(D/E)XK nuclease superfamily J168_04670 PF13361 UvrD-like helicase C-terminal domain J168_04670 PF00580 UvrD/REP helicase N-terminal domain J168_04671 PF17946 RecC C-terminal domain J168_04673 PF00005 ABC transporter J168_04674 PF02405 Permease MlaE J168_04675 PF02470 MlaD protein J168_04676 PF05494 MlaC protein J168_04678 PF04333 MlaA lipoprotein J168_04680 PF00255 Glutathione peroxidase J168_04682 PF02646 RmuC family J168_04683 PF00107 Zinc-binding dehydrogenase J168_04683 PF08240 Alcohol dehydrogenase GroES-like domain J168_04684 PF03466 LysR substrate binding domain J168_04684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J168_04686 PF00043 Glutathione S-transferase, C-terminal domain J168_04686 PF13417 Glutathione S-transferase, N-terminal domain J168_04688 PF13520 Amino acid permease J168_04689 PF17678 Glycosyl hydrolase family 92 N-terminal domain J168_04689 PF07971 Glycosyl hydrolase family 92 J168_04690 PF10947 Protein of unknown function (DUF2628) J168_04691 PF00990 Diguanylate cyclase, GGDEF domain J168_04692 PF05651 Putative sugar diacid recognition J168_04692 PF13556 PucR C-terminal helix-turn-helix domain J168_04692 PF17853 GGDEF-like domain J168_04693 PF02595 Glycerate kinase family J168_04694 PF07690 Major Facilitator Superfamily J168_04697 PF10672 S-adenosylmethionine-dependent methyltransferase J168_04697 PF17785 PUA-like domain J168_04699 PF03741 Integral membrane protein TerC family J168_04700 PF01694 Rhomboid family J168_04701 PF03009 Glycerophosphoryl diester phosphodiesterase family J168_04703 PF01569 PAP2 superfamily J168_04704 PF01926 50S ribosome-binding GTPase J168_04704 PF12631 MnmE helical domain J168_04704 PF10396 GTP-binding protein TrmE N-terminus J168_04705 PF01522 Polysaccharide deacetylase J168_04706 PF14849 YidC periplasmic domain J168_04706 PF02096 60Kd inner membrane protein J168_04707 PF00825 Ribonuclease P J168_04708 PF00468 Ribosomal protein L34