J170_00001 SM00966 SpoVT / AbrB like domain J170_00022 SM00857 Resolvase, N terminal domain J170_00029 SM00670 Large family of predicted nucleotide-binding domains J170_00031 SM00857 Resolvase, N terminal domain J170_00087 SM00470 ParB-like nuclease domain J170_00094 SM00857 Resolvase, N terminal domain J170_00100 SM00670 Large family of predicted nucleotide-binding domains J170_00102 SM00857 Resolvase, N terminal domain J170_00103 SM00382 ATPases associated with a variety of cellular activities J170_00103 SM00760 Bacterial dnaA protein helix-turn-helix domain J170_00104 SM00480 DNA polymerase III beta subunit J170_00107 SM00387 Histidine kinase-like ATPases J170_00107 SM00433 TopoisomeraseII J170_00110 SM00028 Tetratricopeptide repeats J170_00117 SM00155 Phospholipase D. Active site motifs. J170_00120 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_00126 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_00126 SM00245 tail specific protease J170_00134 SM00829 Enoylreductase J170_00159 SM00382 ATPases associated with a variety of cellular activities J170_00183 SM00487 DEAD-like helicases superfamily J170_00183 SM00490 helicase superfamily c-terminal domain J170_00187 SM00822 J170_00187 J170_00188 SM00822 J170_00188 J170_00237 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J170_00241 SM00421 helix_turn_helix, Lux Regulon J170_00241 SM00448 cheY-homologous receiver domain J170_00245 SM00862 Transcriptional regulatory protein, C terminal J170_00261 SM00642 Alpha-amylase domain J170_00262 SM00642 Alpha-amylase domain J170_00263 SM00642 Alpha-amylase domain J170_00273 SM00354 helix_turn _helix lactose operon repressor J170_00281 SM00344 helix_turn_helix ASNC type J170_00285 SM00382 ATPases associated with a variety of cellular activities J170_00288 SM00382 ATPases associated with a variety of cellular activities J170_00294 SM00530 Helix-turn-helix XRE-family like proteins J170_00299 SM00855 Phosphoglycerate mutase family J170_00300 SM00867 YceI-like domain J170_00301 SM00155 Phospholipase D. Active site motifs. J170_00303 SM00563 Phosphate acyltransferases J170_00306 SM00028 Tetratricopeptide repeats J170_00308 SM00829 Enoylreductase J170_00311 SM01230 J170_00311 J170_00312 SM00938 Nitrogen regulatory protein P-II J170_00314 SM00387 Histidine kinase-like ATPases J170_00314 SM00388 His Kinase A (phosphoacceptor) domain J170_00315 SM00382 ATPases associated with a variety of cellular activities J170_00315 SM00448 cheY-homologous receiver domain J170_00327 SM00450 Rhodanese Homology Domain J170_00332 SM00387 Histidine kinase-like ATPases J170_00332 SM00388 His Kinase A (phosphoacceptor) domain J170_00333 SM00382 ATPases associated with a variety of cellular activities J170_00333 SM00448 cheY-homologous receiver domain J170_00355 SM00563 Phosphate acyltransferases J170_00361 SM00342 helix_turn_helix, arabinose operon control protein J170_00366 SM00100 Cyclic nucleotide-monophosphate binding domain J170_00366 SM00267 diguanylate cyclase J170_00372 SM00878 Biotin carboxylase C-terminal domain J170_00377 SM00953 J170_00377 J170_00385 SM00833 Cobalamin synthesis protein cobW C-terminal domain J170_00390 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_00396 SM00829 Enoylreductase J170_00402 SM00487 DEAD-like helicases superfamily J170_00402 SM00490 helicase superfamily c-terminal domain J170_00402 SM00847 Helicase associated domain (HA2) Add an annotation J170_00427 SM00422 helix_turn_helix, mercury resistance J170_00434 SM00448 cheY-homologous receiver domain J170_00434 SM00862 Transcriptional regulatory protein, C terminal J170_00435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_00435 SM00387 Histidine kinase-like ATPases J170_00435 SM00388 His Kinase A (phosphoacceptor) domain J170_00461 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_00462 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_00466 SM00342 helix_turn_helix, arabinose operon control protein J170_00473 SM00420 helix_turn_helix, Deoxyribose operon repressor J170_00473 SM01134 J170_00473 J170_00476 SM00882 Coenzyme A transferase J170_00477 SM00882 Coenzyme A transferase J170_00481 SM00998 Adenylosuccinate lyase C-terminus J170_00485 SM00346 helix_turn_helix isocitrate lyase regulation J170_00486 SM00090 RIO-like kinase J170_00489 SM01228 J170_00489 J170_00500 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_00500 SM00876 Biotin and Thiamin Synthesis associated domain J170_00505 SM00369 Leucine-rich repeats, typical (most populated) subfamily J170_00525 SM00382 ATPases associated with a variety of cellular activities J170_00537 SM00267 diguanylate cyclase J170_00539 SM00642 Alpha-amylase domain J170_00540 SM00642 Alpha-amylase domain J170_00542 SM00642 Alpha-amylase domain J170_00544 SM00642 Alpha-amylase domain J170_00553 SM00822 J170_00553 J170_00555 SM00487 DEAD-like helicases superfamily J170_00555 SM00490 helicase superfamily c-terminal domain J170_00558 SM00326 Src homology 3 domains J170_00559 SM00861 Transketolase, pyrimidine binding domain J170_00561 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J170_00565 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_00584 SM00271 DnaJ molecular chaperone homology domain J170_00588 SM00046 Diacylglycerol kinase catalytic domain (presumed) J170_00592 SM00903 Flavin reductase like domain J170_00596 SM00100 Cyclic nucleotide-monophosphate binding domain J170_00596 SM00419 helix_turn_helix, cAMP Regulatory protein J170_00606 SM00387 Histidine kinase-like ATPases J170_00606 SM00388 His Kinase A (phosphoacceptor) domain J170_00606 SM00448 cheY-homologous receiver domain J170_00607 SM00052 Putative diguanylate phosphodiesterase J170_00607 SM00267 diguanylate cyclase J170_00607 SM00448 cheY-homologous receiver domain J170_00618 SM00563 Phosphate acyltransferases J170_00622 SM01209 J170_00622 J170_00622 SM01210 J170_00622 J170_00624 SM00798 AICARFT/IMPCHase bienzyme J170_00624 SM00851 MGS-like domain J170_00627 SM00195 Dual specificity phosphatase, catalytic domain J170_00631 SM00563 Phosphate acyltransferases J170_00636 SM00530 Helix-turn-helix XRE-family like proteins J170_00641 SM00878 Biotin carboxylase C-terminal domain J170_00647 SM00342 helix_turn_helix, arabinose operon control protein J170_00649 SM00234 in StAR and phosphatidylcholine transfer protein J170_00653 SM00883 Chaperonin 10 Kd subunit J170_00664 SM00944 Pro-kumamolisin, activation domain J170_00667 SM00867 YceI-like domain J170_00678 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J170_00680 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_00680 SM00895 J170_00680 J170_00684 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_00684 SM00331 Sigma factor PP2C-like phosphatases J170_00692 SM00342 helix_turn_helix, arabinose operon control protein J170_00704 SM00267 diguanylate cyclase J170_00709 SM00062 Bacterial periplasmic substrate-binding proteins J170_00718 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J170_00718 SM01232 J170_00718 J170_00720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_00723 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_00723 SM00091 PAS domain J170_00723 SM00267 diguanylate cyclase J170_00724 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_00724 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_00724 SM01049 J170_00724 J170_00725 SM00637 J170_00725 J170_00727 SM00267 diguanylate cyclase J170_00733 SM00448 cheY-homologous receiver domain J170_00733 SM00850 LytTr DNA-binding domain J170_00749 SM00382 ATPases associated with a variety of cellular activities J170_00749 SM01086 C-terminal, D2-small domain, of ClpB protein J170_00755 SM00267 diguanylate cyclase J170_00756 SM01263 J170_00756 J170_00759 SM00564 beta-propeller repeat J170_00760 SM00062 Bacterial periplasmic substrate-binding proteins J170_00760 SM00248 ankyrin repeats J170_00763 SM00829 Enoylreductase J170_00765 SM00382 ATPases associated with a variety of cellular activities J170_00767 SM00268 Actin J170_00772 SM00710 Parallel beta-helix repeats J170_00775 SM00936 Penicillin-binding protein 5, C-terminal domain J170_00779 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_00780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_00780 SM00245 tail specific protease J170_00791 SM01350 J170_00791 J170_00793 SM00749 bacterial OsmY and nodulation domain J170_00794 SM00387 Histidine kinase-like ATPases J170_00794 SM00388 His Kinase A (phosphoacceptor) domain J170_00795 SM00448 cheY-homologous receiver domain J170_00796 SM00387 Histidine kinase-like ATPases J170_00796 SM00388 His Kinase A (phosphoacceptor) domain J170_00796 SM00448 cheY-homologous receiver domain J170_00802 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J170_00807 SM00382 ATPases associated with a variety of cellular activities J170_00823 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_00823 SM00866 J170_00823 J170_00825 SM00354 helix_turn _helix lactose operon repressor J170_00839 SM00849 Metallo-beta-lactamase superfamily J170_00840 SM00342 helix_turn_helix, arabinose operon control protein J170_00842 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_00842 SM00387 Histidine kinase-like ATPases J170_00842 SM00388 His Kinase A (phosphoacceptor) domain J170_00843 SM00448 cheY-homologous receiver domain J170_00843 SM00862 Transcriptional regulatory protein, C terminal J170_00847 SM00829 Enoylreductase J170_00850 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_00854 SM00382 ATPases associated with a variety of cellular activities J170_00867 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J170_00873 SM00387 Histidine kinase-like ATPases J170_00873 SM00388 His Kinase A (phosphoacceptor) domain J170_00874 SM00448 cheY-homologous receiver domain J170_00874 SM00862 Transcriptional regulatory protein, C terminal J170_00898 SM00842 Cell division protein FtsA J170_00899 SM00864 Tubulin/FtsZ family, GTPase domain J170_00899 SM00865 Tubulin/FtsZ family, C-terminal domain J170_00903 SM00957 SecA DEAD-like domain J170_00903 SM00958 SecA preprotein cross-linking domain J170_00909 SM00829 Enoylreductase J170_00910 SM00944 Pro-kumamolisin, activation domain J170_00913 SM00642 Alpha-amylase domain J170_00920 SM00996 S-adenosyl-L-homocysteine hydrolase J170_00920 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J170_00945 SM00382 ATPases associated with a variety of cellular activities J170_00949 SM00382 ATPases associated with a variety of cellular activities J170_00951 SM00448 cheY-homologous receiver domain J170_00951 SM00862 Transcriptional regulatory protein, C terminal J170_00952 SM00387 Histidine kinase-like ATPases J170_00952 SM00388 His Kinase A (phosphoacceptor) domain J170_00962 SM00382 ATPases associated with a variety of cellular activities J170_00964 SM00382 ATPases associated with a variety of cellular activities J170_00977 SM00382 ATPases associated with a variety of cellular activities J170_00980 SM00650 Ribosomal RNA adenine dimethylases J170_00985 SM00108 Bulb-type mannose-specific lectin J170_00994 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_00994 SM00895 J170_00994 J170_01001 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_01013 SM00448 cheY-homologous receiver domain J170_01014 SM00387 Histidine kinase-like ATPases J170_01014 SM00388 His Kinase A (phosphoacceptor) domain J170_01014 SM00448 cheY-homologous receiver domain J170_01015 SM00421 helix_turn_helix, Lux Regulon J170_01028 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J170_01028 SM00475 5'-3' exonuclease J170_01034 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J170_01034 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J170_01058 SM00852 Probable molybdopterin binding domain J170_01059 SM00028 Tetratricopeptide repeats J170_01060 SM00937 J170_01060 J170_01062 SM00028 Tetratricopeptide repeats J170_01066 SM01400 J170_01066 J170_01076 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J170_01076 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J170_01077 SM00649 Ribosomal protein L11/L12 J170_01083 SM00663 RNA polymerase I subunit A N-terminus J170_01086 SM00838 Elongation factor G C-terminus J170_01086 SM00889 Elongation factor G, domain IV J170_01088 SM01403 J170_01088 J170_01092 SM01382 J170_01092 J170_01092 SM01383 J170_01092 J170_01095 SM00322 K homology RNA-binding domain J170_01099 SM01374 J170_01099 J170_01100 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J170_01112 SM00363 S4 RNA-binding domain J170_01112 SM01390 J170_01112 J170_01113 SM00662 RNA polymerases D J170_01121 SM00838 Elongation factor G C-terminus J170_01127 SM00829 Enoylreductase J170_01136 SM00382 ATPases associated with a variety of cellular activities J170_01138 SM00829 Enoylreductase J170_01143 SM00855 Phosphoglycerate mutase family J170_01154 SM00014 Acid phosphatase homologues J170_01158 SM00091 PAS domain J170_01158 SM00387 Histidine kinase-like ATPases J170_01158 SM00388 His Kinase A (phosphoacceptor) domain J170_01159 SM00448 cheY-homologous receiver domain J170_01159 SM00862 Transcriptional regulatory protein, C terminal J170_01163 SM01329 J170_01163 J170_01197 SM00387 Histidine kinase-like ATPases J170_01198 SM00091 PAS domain J170_01202 SM00382 ATPases associated with a variety of cellular activities J170_01202 SM00994 ClpX C4-type zinc finger J170_01202 SM01086 C-terminal, D2-small domain, of ClpB protein J170_01203 SM00382 ATPases associated with a variety of cellular activities J170_01203 SM00464 Found in ATP-dependent protease La (LON) J170_01204 SM00411 bacterial (prokaryotic) histone like domain J170_01210 SM00257 Lysin motif J170_01211 SM00849 Metallo-beta-lactamase superfamily J170_01214 SM00479 J170_01214 J170_01215 SM00331 Sigma factor PP2C-like phosphatases J170_01215 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J170_01220 SM00849 Metallo-beta-lactamase superfamily J170_01221 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_01234 SM00382 ATPases associated with a variety of cellular activities J170_01236 SM00493 J170_01236 J170_01239 SM00460 Transglutaminase/protease-like homologues J170_01241 SM00382 ATPases associated with a variety of cellular activities J170_01250 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J170_01251 SM00822 J170_01251 J170_01253 SM00825 Beta-ketoacyl synthase J170_01260 SM00382 ATPases associated with a variety of cellular activities J170_01269 SM01359 J170_01269 J170_01269 SM01360 J170_01269 J170_01276 SM00271 DnaJ molecular chaperone homology domain J170_01278 SM00448 cheY-homologous receiver domain J170_01280 SM00244 prohibitin homologues J170_01281 SM00244 prohibitin homologues J170_01282 SM01321 J170_01282 J170_01283 SM00788 Adenylosuccinate synthetase J170_01286 SM00822 J170_01286 J170_01296 SM00220 Serine/Threonine protein kinases, catalytic domain J170_01300 SM00855 Phosphoglycerate mutase family J170_01311 SM00052 Putative diguanylate phosphodiesterase J170_01312 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_01314 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J170_01315 SM01092 CO dehydrogenase flavoprotein C-terminal domain J170_01318 SM00974 J170_01318 J170_01322 SM00966 SpoVT / AbrB like domain J170_01326 SM00481 DNA polymerase alpha chain like domain J170_01328 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_01335 SM00091 PAS domain J170_01335 SM00342 helix_turn_helix, arabinose operon control protein J170_01340 SM01060 J170_01340 J170_01352 SM00448 cheY-homologous receiver domain J170_01352 SM00862 Transcriptional regulatory protein, C terminal J170_01353 SM00387 Histidine kinase-like ATPases J170_01353 SM00388 His Kinase A (phosphoacceptor) domain J170_01360 SM00421 helix_turn_helix, Lux Regulon J170_01360 SM00448 cheY-homologous receiver domain J170_01363 SM00478 endonuclease III J170_01367 SM00244 prohibitin homologues J170_01385 SM00904 Riboflavin kinase J170_01394 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_01395 SM00382 ATPases associated with a variety of cellular activities J170_01397 SM00862 Transcriptional regulatory protein, C terminal J170_01398 SM00342 helix_turn_helix, arabinose operon control protein J170_01405 SM00387 Histidine kinase-like ATPases J170_01405 SM00388 His Kinase A (phosphoacceptor) domain J170_01406 SM00387 Histidine kinase-like ATPases J170_01406 SM00388 His Kinase A (phosphoacceptor) domain J170_01406 SM00448 cheY-homologous receiver domain J170_01411 SM00387 Histidine kinase-like ATPases J170_01411 SM00388 His Kinase A (phosphoacceptor) domain J170_01411 SM00448 cheY-homologous receiver domain J170_01413 SM00138 Methyltransferase, chemotaxis proteins J170_01414 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_01414 SM00387 Histidine kinase-like ATPases J170_01414 SM00388 His Kinase A (phosphoacceptor) domain J170_01414 SM00448 cheY-homologous receiver domain J170_01415 SM00091 PAS domain J170_01415 SM00387 Histidine kinase-like ATPases J170_01415 SM00388 His Kinase A (phosphoacceptor) domain J170_01416 SM00448 cheY-homologous receiver domain J170_01418 SM00813 Alpha-L-arabinofuranosidase C-terminus J170_01421 SM00382 ATPases associated with a variety of cellular activities J170_01421 SM00962 SRP54-type protein, GTPase domain J170_01421 SM00963 SRP54-type protein, helical bundle domain J170_01435 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J170_01435 SM00534 ATPase domain of DNA mismatch repair MUTS family J170_01440 SM00812 Alpha-L-fucosidase J170_01445 SM00530 Helix-turn-helix XRE-family like proteins J170_01455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_01456 SM00838 Elongation factor G C-terminus J170_01459 SM00358 Double-stranded RNA binding motif J170_01459 SM00535 Ribonuclease III family J170_01462 SM00448 cheY-homologous receiver domain J170_01464 SM01118 J170_01464 J170_01471 SM00357 Cold shock protein domain J170_01474 SM00487 DEAD-like helicases superfamily J170_01474 SM00490 helicase superfamily c-terminal domain J170_01480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_01480 SM00267 diguanylate cyclase J170_01484 SM00869 Autotransporter beta-domain J170_01485 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J170_01486 SM00671 Sel1-like repeats. J170_01486 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J170_01525 SM00382 ATPases associated with a variety of cellular activities J170_01542 SM00481 DNA polymerase alpha chain like domain J170_01550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_01556 SM00267 diguanylate cyclase J170_01561 SM00972 Spore Coat Protein U domain J170_01564 SM00972 Spore Coat Protein U domain J170_01566 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_01570 SM01172 J170_01570 J170_01571 SM00710 Parallel beta-helix repeats J170_01571 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J170_01578 SM00434 DNA Topoisomerase IV J170_01579 SM00342 helix_turn_helix, arabinose operon control protein J170_01580 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_01585 SM01217 J170_01585 J170_01586 SM00631 J170_01586 J170_01592 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_01596 SM00382 ATPases associated with a variety of cellular activities J170_01599 SM00947 Carbonic anhydrase J170_01602 SM00357 Cold shock protein domain J170_01625 SM00267 diguanylate cyclase J170_01627 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_01627 SM00267 diguanylate cyclase J170_01663 SM00271 DnaJ molecular chaperone homology domain J170_01673 SM00382 ATPases associated with a variety of cellular activities J170_01678 SM00861 Transketolase, pyrimidine binding domain J170_01680 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J170_01684 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_01684 SM01091 Transporter associated domain J170_01690 SM00382 ATPases associated with a variety of cellular activities J170_01691 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_01695 SM00984 UDP binding domain J170_01699 SM00354 helix_turn _helix lactose operon repressor J170_01703 SM01018 B12 binding domain J170_01705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J170_01709 SM00316 Ribosomal protein S1-like RNA-binding domain J170_01709 SM00357 Cold shock protein domain J170_01709 SM00955 J170_01709 J170_01711 SM00967 RNA 2'-O ribose methyltransferase substrate binding J170_01712 SM00267 diguanylate cyclase J170_01713 SM00479 J170_01713 J170_01716 SM00382 ATPases associated with a variety of cellular activities J170_01723 SM00947 Carbonic anhydrase J170_01725 SM00478 endonuclease III J170_01730 SM00450 Rhodanese Homology Domain J170_01732 SM00644 J170_01732 J170_01736 SM00382 ATPases associated with a variety of cellular activities J170_01737 SM00981 J170_01737 J170_01742 SM00479 J170_01742 J170_01747 SM00947 Carbonic anhydrase J170_01756 SM00421 helix_turn_helix, Lux Regulon J170_01756 SM00448 cheY-homologous receiver domain J170_01768 SM00968 SMC proteins Flexible Hinge Domain J170_01769 SM00771 ZipA, C-terminal domain (FtsZ-binding) J170_01772 SM00292 breast cancer carboxy-terminal domain J170_01772 SM00532 Ligase N family J170_01776 SM00434 DNA Topoisomerase IV J170_01777 SM00564 beta-propeller repeat J170_01784 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_01784 SM00866 J170_01784 J170_01789 SM00240 Forkhead associated domain J170_01793 SM00830 Chorismate mutase type II J170_01810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_01810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_01812 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_01813 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_01813 SM00091 PAS domain J170_01813 SM00387 Histidine kinase-like ATPases J170_01813 SM00388 His Kinase A (phosphoacceptor) domain J170_01813 SM00448 cheY-homologous receiver domain J170_01814 SM00448 cheY-homologous receiver domain J170_01815 SM00382 ATPases associated with a variety of cellular activities J170_01816 SM00091 PAS domain J170_01816 SM00387 Histidine kinase-like ATPases J170_01816 SM00388 His Kinase A (phosphoacceptor) domain J170_01816 SM00448 cheY-homologous receiver domain J170_01847 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_01849 SM00382 ATPases associated with a variety of cellular activities J170_01854 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_01854 SM01091 Transporter associated domain J170_01859 SM00387 Histidine kinase-like ATPases J170_01859 SM00433 TopoisomeraseII J170_01864 SM01192 J170_01864 J170_01864 SM01193 J170_01864 J170_01869 SM00463 Small MutS-related domain J170_01873 SM00257 Lysin motif J170_01876 SM01103 J170_01876 J170_01878 SM00382 ATPases associated with a variety of cellular activities J170_01886 SM00382 ATPases associated with a variety of cellular activities J170_01888 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J170_01891 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_01891 SM00091 PAS domain J170_01891 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_01901 SM00670 Large family of predicted nucleotide-binding domains J170_01905 SM01130 J170_01905 J170_01910 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J170_01919 SM00758 J170_01919 J170_01926 SM00646 J170_01926 J170_01942 SM00052 Putative diguanylate phosphodiesterase J170_01942 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_01942 SM00267 diguanylate cyclase J170_01944 SM00448 cheY-homologous receiver domain J170_01945 SM00387 Histidine kinase-like ATPases J170_01947 SM00014 Acid phosphatase homologues J170_01962 SM00912 haemagglutination activity domain J170_01972 SM00100 Cyclic nucleotide-monophosphate binding domain J170_01972 SM00419 helix_turn_helix, cAMP Regulatory protein J170_01987 SM01007 Class II Aldolase and Adducin N-terminal domain J170_01996 SM00841 Elongation factor P, C-terminal J170_01996 SM01185 J170_01996 J170_01997 SM00822 J170_01997 J170_02001 SM00899 J170_02001 J170_02008 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J170_02010 SM00851 MGS-like domain J170_02010 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J170_02021 SM00850 LytTr DNA-binding domain J170_02022 SM00937 J170_02022 J170_02024 SM00448 cheY-homologous receiver domain J170_02024 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_02025 SM00073 Histidine Phosphotransfer domain J170_02025 SM00387 Histidine kinase-like ATPases J170_02025 SM00388 His Kinase A (phosphoacceptor) domain J170_02025 SM00448 cheY-homologous receiver domain J170_02030 SM00966 SpoVT / AbrB like domain J170_02034 SM00052 Putative diguanylate phosphodiesterase J170_02034 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_02034 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02034 SM00091 PAS domain J170_02034 SM00267 diguanylate cyclase J170_02035 SM00448 cheY-homologous receiver domain J170_02037 SM00138 Methyltransferase, chemotaxis proteins J170_02038 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02039 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02041 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02042 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02042 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02043 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02047 SM01049 J170_02047 J170_02049 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02049 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02050 SM00073 Histidine Phosphotransfer domain J170_02050 SM00260 Two component signalling adaptor domain J170_02050 SM00387 Histidine kinase-like ATPases J170_02050 SM01231 J170_02050 J170_02051 SM00448 cheY-homologous receiver domain J170_02053 SM00260 Two component signalling adaptor domain J170_02059 SM00220 Serine/Threonine protein kinases, catalytic domain J170_02073 SM00530 Helix-turn-helix XRE-family like proteins J170_02078 SM00073 Histidine Phosphotransfer domain J170_02078 SM00260 Two component signalling adaptor domain J170_02078 SM00387 Histidine kinase-like ATPases J170_02078 SM01231 J170_02078 J170_02080 SM00448 cheY-homologous receiver domain J170_02083 SM00382 ATPases associated with a variety of cellular activities J170_02083 SM00962 SRP54-type protein, GTPase domain J170_02086 SM00052 Putative diguanylate phosphodiesterase J170_02086 SM00267 diguanylate cyclase J170_02087 SM00267 diguanylate cyclase J170_02088 SM00267 diguanylate cyclase J170_02099 SM00382 ATPases associated with a variety of cellular activities J170_02110 SM00822 J170_02110 J170_02115 SM00382 ATPases associated with a variety of cellular activities J170_02116 SM00448 cheY-homologous receiver domain J170_02118 SM00421 helix_turn_helix, Lux Regulon J170_02118 SM00448 cheY-homologous receiver domain J170_02126 SM00047 Lysozyme subfamily 2 J170_02135 SM00260 Two component signalling adaptor domain J170_02135 SM00448 cheY-homologous receiver domain J170_02136 SM00858 J170_02136 J170_02139 SM00387 Histidine kinase-like ATPases J170_02140 SM00052 Putative diguanylate phosphodiesterase J170_02140 SM00267 diguanylate cyclase J170_02140 SM00448 cheY-homologous receiver domain J170_02141 SM00091 PAS domain J170_02141 SM00387 Histidine kinase-like ATPases J170_02142 SM00052 Putative diguanylate phosphodiesterase J170_02142 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02142 SM00091 PAS domain J170_02142 SM00267 diguanylate cyclase J170_02144 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02149 SM00382 ATPases associated with a variety of cellular activities J170_02149 SM01086 C-terminal, D2-small domain, of ClpB protein J170_02150 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02154 SM00382 ATPases associated with a variety of cellular activities J170_02154 SM00843 J170_02154 J170_02158 SM00382 ATPases associated with a variety of cellular activities J170_02165 SM00562 J170_02165 J170_02167 SM00028 Tetratricopeptide repeats J170_02170 SM00564 beta-propeller repeat J170_02171 SM00382 ATPases associated with a variety of cellular activities J170_02172 SM00852 Probable molybdopterin binding domain J170_02173 SM00450 Rhodanese Homology Domain J170_02182 SM00852 Probable molybdopterin binding domain J170_02187 SM00529 Helix-turn-helix diphteria tox regulatory element J170_02189 SM00479 J170_02189 J170_02203 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02203 SM00732 Likely ribonuclease with RNase H fold. J170_02204 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_02204 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02204 SM00091 PAS domain J170_02204 SM00387 Histidine kinase-like ATPases J170_02204 SM00388 His Kinase A (phosphoacceptor) domain J170_02204 SM00448 cheY-homologous receiver domain J170_02205 SM00448 cheY-homologous receiver domain J170_02222 SM00382 ATPases associated with a variety of cellular activities J170_02233 SM00382 ATPases associated with a variety of cellular activities J170_02235 SM00849 Metallo-beta-lactamase superfamily J170_02238 SM00382 ATPases associated with a variety of cellular activities J170_02241 SM00226 Low molecular weight phosphatase family J170_02243 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J170_02243 SM00465 GIY-YIG type nucleases (URI domain) J170_02249 SM00823 Phosphopantetheine attachment site J170_02256 SM00984 UDP binding domain J170_02260 SM00450 Rhodanese Homology Domain J170_02261 SM00421 helix_turn_helix, Lux Regulon J170_02261 SM00448 cheY-homologous receiver domain J170_02262 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02263 SM00363 S4 RNA-binding domain J170_02271 SM01034 Sensors of blue-light using FAD J170_02292 SM00448 cheY-homologous receiver domain J170_02292 SM00850 LytTr DNA-binding domain J170_02295 SM00869 Autotransporter beta-domain J170_02299 SM00387 Histidine kinase-like ATPases J170_02299 SM00388 His Kinase A (phosphoacceptor) domain J170_02300 SM00421 helix_turn_helix, Lux Regulon J170_02300 SM00448 cheY-homologous receiver domain J170_02301 SM00869 Autotransporter beta-domain J170_02302 SM00052 Putative diguanylate phosphodiesterase J170_02307 SM01012 J170_02307 J170_02316 SM00342 helix_turn_helix, arabinose operon control protein J170_02317 SM00387 Histidine kinase-like ATPases J170_02318 SM00421 helix_turn_helix, Lux Regulon J170_02318 SM00448 cheY-homologous receiver domain J170_02319 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02326 SM00530 Helix-turn-helix XRE-family like proteins J170_02340 SM00966 SpoVT / AbrB like domain J170_02345 SM00965 Secretin and TonB N terminus short domain J170_02350 SM00736 Dystroglycan-type cadherin-like domains. J170_02355 SM00382 ATPases associated with a variety of cellular activities J170_02366 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J170_02366 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J170_02391 SM00342 helix_turn_helix, arabinose operon control protein J170_02400 SM00487 DEAD-like helicases superfamily J170_02451 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_02451 SM01240 J170_02451 J170_02456 SM00822 J170_02456 J170_02458 SM00028 Tetratricopeptide repeats J170_02460 SM00411 bacterial (prokaryotic) histone like domain J170_02461 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02477 SM00354 helix_turn _helix lactose operon repressor J170_02482 SM00363 S4 RNA-binding domain J170_02487 SM00382 ATPases associated with a variety of cellular activities J170_02497 SM00357 Cold shock protein domain J170_02498 SM00382 ATPases associated with a variety of cellular activities J170_02499 SM00382 ATPases associated with a variety of cellular activities J170_02505 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J170_02507 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J170_02510 SM00859 Semialdehyde dehydrogenase, NAD binding domain J170_02518 SM00840 J170_02518 J170_02522 SM01234 J170_02522 J170_02530 SM00849 Metallo-beta-lactamase superfamily J170_02535 SM00656 J170_02535 J170_02543 SM00841 Elongation factor P, C-terminal J170_02543 SM01185 J170_02543 J170_02545 SM00052 Putative diguanylate phosphodiesterase J170_02545 SM00267 diguanylate cyclase J170_02545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02552 SM00382 ATPases associated with a variety of cellular activities J170_02553 SM00487 DEAD-like helicases superfamily J170_02553 SM00490 helicase superfamily c-terminal domain J170_02558 SM00357 Cold shock protein domain J170_02559 SM01322 J170_02559 J170_02561 SM00052 Putative diguanylate phosphodiesterase J170_02561 SM00267 diguanylate cyclase J170_02564 SM00822 J170_02564 J170_02568 SM00853 MutL C terminal dimerisation domain J170_02568 SM01340 J170_02568 J170_02569 SM00646 J170_02569 J170_02576 SM00474 3'-5' exonuclease J170_02580 SM00528 Domain in histone-like proteins of HNS family J170_02598 SM00857 Resolvase, N terminal domain J170_02613 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_02613 SM00267 diguanylate cyclase J170_02614 SM00260 Two component signalling adaptor domain J170_02615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_02615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02617 SM00487 DEAD-like helicases superfamily J170_02617 SM00490 helicase superfamily c-terminal domain J170_02628 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_02633 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_02633 SM01091 Transporter associated domain J170_02639 SM00382 ATPases associated with a variety of cellular activities J170_02645 SM01230 J170_02645 J170_02647 SM01230 J170_02647 J170_02649 SM00267 diguanylate cyclase J170_02649 SM00448 cheY-homologous receiver domain J170_02659 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02659 SM00091 PAS domain J170_02659 SM00387 Histidine kinase-like ATPases J170_02659 SM00388 His Kinase A (phosphoacceptor) domain J170_02659 SM00448 cheY-homologous receiver domain J170_02659 SM01079 J170_02659 J170_02660 SM00448 cheY-homologous receiver domain J170_02660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_02666 SM00354 helix_turn _helix lactose operon repressor J170_02679 SM01323 J170_02679 J170_02682 SM00344 helix_turn_helix ASNC type J170_02697 SM00387 Histidine kinase-like ATPases J170_02707 SM00944 Pro-kumamolisin, activation domain J170_02718 SM01130 J170_02718 J170_02723 SM00342 helix_turn_helix, arabinose operon control protein J170_02724 SM00382 ATPases associated with a variety of cellular activities J170_02724 SM00962 SRP54-type protein, GTPase domain J170_02724 SM00963 SRP54-type protein, helical bundle domain J170_02725 SM00478 endonuclease III J170_02727 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02727 SM00091 PAS domain J170_02727 SM00387 Histidine kinase-like ATPases J170_02727 SM00388 His Kinase A (phosphoacceptor) domain J170_02727 SM00448 cheY-homologous receiver domain J170_02730 SM00465 GIY-YIG type nucleases (URI domain) J170_02736 SM00507 HNH nucleases J170_02737 SM00861 Transketolase, pyrimidine binding domain J170_02742 SM00849 Metallo-beta-lactamase superfamily J170_02759 SM00422 helix_turn_helix, mercury resistance J170_02760 SM00411 bacterial (prokaryotic) histone like domain J170_02761 SM00873 B3/4 domain J170_02761 SM00874 tRNA synthetase B5 domain J170_02761 SM00896 Ferredoxin-fold anticodon binding domain J170_02767 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J170_02768 SM00354 helix_turn _helix lactose operon repressor J170_02769 SM00642 Alpha-amylase domain J170_02776 SM00642 Alpha-amylase domain J170_02787 SM00382 ATPases associated with a variety of cellular activities J170_02799 SM00487 DEAD-like helicases superfamily J170_02799 SM00490 helicase superfamily c-terminal domain J170_02850 SM01001 AIR carboxylase J170_02854 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02854 SM00322 K homology RNA-binding domain J170_02855 SM01387 J170_02855 J170_02859 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02859 SM00322 K homology RNA-binding domain J170_02869 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J170_02870 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J170_02879 SM00822 J170_02879 J170_02882 SM00052 Putative diguanylate phosphodiesterase J170_02882 SM00267 diguanylate cyclase J170_02882 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02896 SM00859 Semialdehyde dehydrogenase, NAD binding domain J170_02902 SM00257 Lysin motif J170_02908 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_02921 SM01160 J170_02921 J170_02932 SM00098 Alkaline phosphatase homologues J170_02933 SM00977 TilS substrate C-terminal domain J170_02936 SM01351 J170_02936 J170_02943 SM00316 Ribosomal protein S1-like RNA-binding domain J170_02969 SM00382 ATPases associated with a variety of cellular activities J170_02976 SM00448 cheY-homologous receiver domain J170_02976 SM00862 Transcriptional regulatory protein, C terminal J170_02977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_02977 SM00387 Histidine kinase-like ATPases J170_02977 SM00388 His Kinase A (phosphoacceptor) domain J170_02983 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_02983 SM00267 diguanylate cyclase J170_02984 SM00363 S4 RNA-binding domain J170_02985 SM00052 Putative diguanylate phosphodiesterase J170_02985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_02985 SM00091 PAS domain J170_02985 SM00267 diguanylate cyclase J170_02986 SM00487 DEAD-like helicases superfamily J170_02986 SM00490 helicase superfamily c-terminal domain J170_02995 SM00342 helix_turn_helix, arabinose operon control protein J170_02995 SM00478 endonuclease III J170_02995 SM01009 AlkA N-terminal domain J170_02999 SM00829 Enoylreductase J170_03013 SM00342 helix_turn_helix, arabinose operon control protein J170_03027 SM00645 Papain family cysteine protease J170_03028 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_03028 SM00387 Histidine kinase-like ATPases J170_03028 SM00388 His Kinase A (phosphoacceptor) domain J170_03029 SM00448 cheY-homologous receiver domain J170_03029 SM00862 Transcriptional regulatory protein, C terminal J170_03032 SM00487 DEAD-like helicases superfamily J170_03032 SM00490 helicase superfamily c-terminal domain J170_03032 SM00982 J170_03032 J170_03032 SM01058 CarD-like/TRCF domain J170_03039 SM00073 Histidine Phosphotransfer domain J170_03039 SM00260 Two component signalling adaptor domain J170_03039 SM00387 Histidine kinase-like ATPases J170_03039 SM01231 J170_03039 J170_03040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_03041 SM00260 Two component signalling adaptor domain J170_03042 SM00052 Putative diguanylate phosphodiesterase J170_03042 SM00448 cheY-homologous receiver domain J170_03043 SM00138 Methyltransferase, chemotaxis proteins J170_03044 SM00448 cheY-homologous receiver domain J170_03045 SM00155 Phospholipase D. Active site motifs. J170_03048 SM00855 Phosphoglycerate mutase family J170_03058 SM00248 ankyrin repeats J170_03068 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J170_03069 SM01092 CO dehydrogenase flavoprotein C-terminal domain J170_03071 SM00829 Enoylreductase J170_03072 SM00267 diguanylate cyclase J170_03073 SM00487 DEAD-like helicases superfamily J170_03093 SM00732 Likely ribonuclease with RNase H fold. J170_03100 SM00382 ATPases associated with a variety of cellular activities J170_03103 SM00411 bacterial (prokaryotic) histone like domain J170_03109 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J170_03112 SM00382 ATPases associated with a variety of cellular activities J170_03118 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J170_03119 SM00671 Sel1-like repeats. J170_03125 SM00054 EF-hand, calcium binding motif J170_03143 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_03147 SM00382 ATPases associated with a variety of cellular activities J170_03156 SM00924 MgtE intracellular N domain J170_03162 SM00656 J170_03162 J170_03164 SM00421 helix_turn_helix, Lux Regulon J170_03170 SM00849 Metallo-beta-lactamase superfamily J170_03172 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J170_03176 SM00422 helix_turn_helix, mercury resistance J170_03203 SM00342 helix_turn_helix, arabinose operon control protein J170_03205 SM00387 Histidine kinase-like ATPases J170_03205 SM00388 His Kinase A (phosphoacceptor) domain J170_03205 SM00448 cheY-homologous receiver domain J170_03206 SM00387 Histidine kinase-like ATPases J170_03206 SM00388 His Kinase A (phosphoacceptor) domain J170_03206 SM00448 cheY-homologous receiver domain J170_03208 SM00387 Histidine kinase-like ATPases J170_03208 SM00388 His Kinase A (phosphoacceptor) domain J170_03208 SM00448 cheY-homologous receiver domain J170_03209 SM00867 YceI-like domain J170_03211 SM00867 YceI-like domain J170_03223 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_03229 SM00028 Tetratricopeptide repeats J170_03249 SM00812 Alpha-L-fucosidase J170_03250 SM00636 J170_03250 J170_03253 SM00758 J170_03253 J170_03253 SM01217 J170_03253 J170_03259 SM01149 J170_03259 J170_03266 SM00369 Leucine-rich repeats, typical (most populated) subfamily J170_03270 SM00260 Two component signalling adaptor domain J170_03272 SM00073 Histidine Phosphotransfer domain J170_03272 SM00260 Two component signalling adaptor domain J170_03272 SM00387 Histidine kinase-like ATPases J170_03272 SM00448 cheY-homologous receiver domain J170_03272 SM01231 J170_03272 J170_03273 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03274 SM00260 Two component signalling adaptor domain J170_03275 SM00448 cheY-homologous receiver domain J170_03276 SM00448 cheY-homologous receiver domain J170_03281 SM00491 J170_03281 J170_03286 SM00954 Region found in RelA / SpoT proteins J170_03295 SM00382 ATPases associated with a variety of cellular activities J170_03295 SM00487 DEAD-like helicases superfamily J170_03295 SM00490 helicase superfamily c-terminal domain J170_03295 SM00847 Helicase associated domain (HA2) Add an annotation J170_03297 SM00341 Helicase and RNase D C-terminal J170_03297 SM00487 DEAD-like helicases superfamily J170_03297 SM00490 helicase superfamily c-terminal domain J170_03297 SM00956 J170_03297 J170_03299 SM00448 cheY-homologous receiver domain J170_03304 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03304 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_03307 SM00448 cheY-homologous receiver domain J170_03308 SM00091 PAS domain J170_03308 SM00911 HWE histidine kinase J170_03319 SM00382 ATPases associated with a variety of cellular activities J170_03322 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J170_03329 SM00834 Putative regulatory protein J170_03338 SM00382 ATPases associated with a variety of cellular activities J170_03358 SM00855 Phosphoglycerate mutase family J170_03370 SM00382 ATPases associated with a variety of cellular activities J170_03370 SM01086 C-terminal, D2-small domain, of ClpB protein J170_03371 SM00382 ATPases associated with a variety of cellular activities J170_03373 SM00062 Bacterial periplasmic substrate-binding proteins J170_03388 SM00564 beta-propeller repeat J170_03389 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03410 SM01126 J170_03410 J170_03412 SM00881 CoA binding domain J170_03414 SM00387 Histidine kinase-like ATPases J170_03414 SM00388 His Kinase A (phosphoacceptor) domain J170_03415 SM00382 ATPases associated with a variety of cellular activities J170_03415 SM00448 cheY-homologous receiver domain J170_03429 SM00387 Histidine kinase-like ATPases J170_03429 SM00388 His Kinase A (phosphoacceptor) domain J170_03430 SM00448 cheY-homologous receiver domain J170_03430 SM00862 Transcriptional regulatory protein, C terminal J170_03433 SM00642 Alpha-amylase domain J170_03434 SM00528 Domain in histone-like proteins of HNS family J170_03436 SM00318 Staphylococcal nuclease homologues J170_03451 SM00387 Histidine kinase-like ATPases J170_03451 SM00388 His Kinase A (phosphoacceptor) domain J170_03452 SM00448 cheY-homologous receiver domain J170_03454 SM00646 J170_03454 J170_03463 SM00530 Helix-turn-helix XRE-family like proteins J170_03467 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_03467 SM00387 Histidine kinase-like ATPases J170_03471 SM00255 Toll - interleukin 1 - resistance J170_03475 SM00869 Autotransporter beta-domain J170_03485 SM00354 helix_turn _helix lactose operon repressor J170_03491 SM00967 RNA 2'-O ribose methyltransferase substrate binding J170_03512 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_03512 SM00387 Histidine kinase-like ATPases J170_03518 SM00506 Appr-1"-p processing enzyme J170_03527 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J170_03532 SM00849 Metallo-beta-lactamase superfamily J170_03535 SM00382 ATPases associated with a variety of cellular activities J170_03547 SM00861 Transketolase, pyrimidine binding domain J170_03550 SM00028 Tetratricopeptide repeats J170_03550 SM00327 von Willebrand factor (vWF) type A domain J170_03551 SM00327 von Willebrand factor (vWF) type A domain J170_03554 SM00382 ATPases associated with a variety of cellular activities J170_03556 SM00965 Secretin and TonB N terminus short domain J170_03567 SM00487 DEAD-like helicases superfamily J170_03567 SM00490 helicase superfamily c-terminal domain J170_03569 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J170_03569 SM00954 Region found in RelA / SpoT proteins J170_03570 SM01409 J170_03570 J170_03571 SM00072 Guanylate kinase homologues. J170_03576 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_03582 SM01011 Aminopeptidase P, N-terminal domain J170_03597 SM00028 Tetratricopeptide repeats J170_03597 SM00382 ATPases associated with a variety of cellular activities J170_03597 SM00421 helix_turn_helix, Lux Regulon J170_03611 SM00464 Found in ATP-dependent protease La (LON) J170_03621 SM00342 helix_turn_helix, arabinose operon control protein J170_03622 SM00862 Transcriptional regulatory protein, C terminal J170_03626 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03632 SM00917 LeuA allosteric (dimerisation) domain J170_03633 SM01329 J170_03633 J170_03637 SM00267 diguanylate cyclase J170_03647 SM00919 Malic enzyme, NAD binding domain J170_03647 SM01274 J170_03647 J170_03650 SM00387 Histidine kinase-like ATPases J170_03650 SM00388 His Kinase A (phosphoacceptor) domain J170_03650 SM00448 cheY-homologous receiver domain J170_03658 SM00421 helix_turn_helix, Lux Regulon J170_03658 SM00448 cheY-homologous receiver domain J170_03660 SM00387 Histidine kinase-like ATPases J170_03660 SM00388 His Kinase A (phosphoacceptor) domain J170_03661 SM00448 cheY-homologous receiver domain J170_03661 SM00862 Transcriptional regulatory protein, C terminal J170_03665 SM00822 J170_03665 J170_03666 SM00354 helix_turn _helix lactose operon repressor J170_03669 SM00642 Alpha-amylase domain J170_03671 SM01154 J170_03671 J170_03678 SM00450 Rhodanese Homology Domain J170_03691 SM00028 Tetratricopeptide repeats J170_03708 SM00345 helix_turn_helix gluconate operon transcriptional repressor J170_03708 SM00866 J170_03708 J170_03720 SM00382 ATPases associated with a variety of cellular activities J170_03725 SM01211 J170_03725 J170_03738 SM00656 J170_03738 J170_03744 SM00528 Domain in histone-like proteins of HNS family J170_03747 SM00382 ATPases associated with a variety of cellular activities J170_03753 SM00882 Coenzyme A transferase J170_03754 SM00882 Coenzyme A transferase J170_03757 SM00984 UDP binding domain J170_03762 SM00893 Electron transfer flavoprotein domain J170_03763 SM00893 Electron transfer flavoprotein domain J170_03777 SM00382 ATPases associated with a variety of cellular activities J170_03780 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_03787 SM00487 DEAD-like helicases superfamily J170_03787 SM00490 helicase superfamily c-terminal domain J170_03794 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_03801 SM00825 Beta-ketoacyl synthase J170_03816 SM00382 ATPases associated with a variety of cellular activities J170_03820 SM00382 ATPases associated with a variety of cellular activities J170_03820 SM00387 Histidine kinase-like ATPases J170_03820 SM00448 cheY-homologous receiver domain J170_03823 SM00830 Chorismate mutase type II J170_03825 SM00382 ATPases associated with a variety of cellular activities J170_03839 SM00986 Uracil DNA glycosylase superfamily J170_03839 SM00987 UreE urease accessory protein, C-terminal domain J170_03845 SM00382 ATPases associated with a variety of cellular activities J170_03845 SM00930 J170_03845 J170_03849 SM00387 Histidine kinase-like ATPases J170_03849 SM00388 His Kinase A (phosphoacceptor) domain J170_03849 SM00448 cheY-homologous receiver domain J170_03859 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_03859 SM00091 PAS domain J170_03859 SM00387 Histidine kinase-like ATPases J170_03859 SM00388 His Kinase A (phosphoacceptor) domain J170_03859 SM00448 cheY-homologous receiver domain J170_03863 SM01005 Alanine racemase, C-terminal domain J170_03865 SM00344 helix_turn_helix ASNC type J170_03876 SM00382 ATPases associated with a variety of cellular activities J170_03878 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J170_03879 SM00986 Uracil DNA glycosylase superfamily J170_03879 SM00987 UreE urease accessory protein, C-terminal domain J170_03880 SM00729 Elongator protein 3, MiaB family, Radical SAM J170_03893 SM00448 cheY-homologous receiver domain J170_03893 SM00850 LytTr DNA-binding domain J170_03894 SM00387 Histidine kinase-like ATPases J170_03901 SM00091 PAS domain J170_03901 SM00138 Methyltransferase, chemotaxis proteins J170_03901 SM00911 HWE histidine kinase J170_03902 SM00448 cheY-homologous receiver domain J170_03904 SM00382 ATPases associated with a variety of cellular activities J170_03904 SM00448 cheY-homologous receiver domain J170_03915 SM00382 ATPases associated with a variety of cellular activities J170_03930 SM00382 ATPases associated with a variety of cellular activities J170_03931 SM00631 J170_03931 J170_03939 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J170_03939 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_03940 SM00477 DNA/RNA non-specific endonuclease J170_03940 SM00892 DNA/RNA non-specific endonuclease J170_03971 SM00257 Lysin motif J170_03976 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J170_03976 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J170_03976 SM00493 J170_03976 J170_03987 SM00487 DEAD-like helicases superfamily J170_03987 SM00490 helicase superfamily c-terminal domain J170_03994 SM00986 Uracil DNA glycosylase superfamily J170_03994 SM00987 UreE urease accessory protein, C-terminal domain J170_03995 SM00448 cheY-homologous receiver domain J170_03997 SM00382 ATPases associated with a variety of cellular activities J170_03998 SM00487 DEAD-like helicases superfamily J170_03998 SM00490 helicase superfamily c-terminal domain J170_04000 SM00357 Cold shock protein domain J170_04000 SM00382 ATPases associated with a variety of cellular activities J170_04000 SM00959 Rho termination factor, N-terminal domain J170_04006 SM00487 DEAD-like helicases superfamily J170_04015 SM00257 Lysin motif J170_04021 SM01150 J170_04021 J170_04030 SM00644 J170_04030 J170_04032 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J170_04039 SM01217 J170_04039 J170_04040 SM00905 Dihydroneopterin aldolase J170_04045 SM00400 zinc finger J170_04045 SM00493 J170_04045 J170_04045 SM00766 DNA primase DnaG DnaB-binding J170_04067 SM00363 S4 RNA-binding domain J170_04076 SM00470 ParB-like nuclease domain J170_04080 SM01259 J170_04080 J170_04086 SM00836 DALR anticodon binding domain J170_04086 SM01016 Arginyl tRNA synthetase N terminal dom J170_04092 SM00823 Phosphopantetheine attachment site J170_04092 SM00824 Thioesterase J170_04099 SM00938 Nitrogen regulatory protein P-II J170_04101 SM00382 ATPases associated with a variety of cellular activities J170_04123 SM00530 Helix-turn-helix XRE-family like proteins J170_04128 SM00052 Putative diguanylate phosphodiesterase J170_04136 SM00244 prohibitin homologues J170_04146 SM00448 cheY-homologous receiver domain J170_04146 SM00862 Transcriptional regulatory protein, C terminal J170_04147 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J170_04147 SM00387 Histidine kinase-like ATPases J170_04147 SM00388 His Kinase A (phosphoacceptor) domain J170_04151 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J170_04160 SM01060 J170_04160 J170_04163 SM00421 helix_turn_helix, Lux Regulon J170_04163 SM00448 cheY-homologous receiver domain J170_04166 SM00382 ATPases associated with a variety of cellular activities J170_04175 SM00849 Metallo-beta-lactamase superfamily J170_04181 SM00960 Roadblock/LC7 domain J170_04194 SM00387 Histidine kinase-like ATPases J170_04194 SM00388 His Kinase A (phosphoacceptor) domain J170_04195 SM00448 cheY-homologous receiver domain J170_04195 SM00862 Transcriptional regulatory protein, C terminal J170_04199 SM00248 ankyrin repeats J170_04200 SM01060 J170_04200 J170_04201 SM00491 J170_04201 J170_04207 SM00477 DNA/RNA non-specific endonuclease J170_04207 SM00892 DNA/RNA non-specific endonuclease J170_04210 SM01004 Delta-aminolevulinic acid dehydratase J170_04218 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J170_04222 SM00382 ATPases associated with a variety of cellular activities J170_04224 SM00530 Helix-turn-helix XRE-family like proteins J170_04232 SM00342 helix_turn_helix, arabinose operon control protein J170_04234 SM00382 ATPases associated with a variety of cellular activities J170_04247 SM00881 CoA binding domain J170_04248 SM00116 Domain in cystathionine beta-synthase and other proteins. J170_04248 SM00924 MgtE intracellular N domain J170_04249 SM01057 Eukaryotic-type carbonic anhydrase J170_04254 SM00248 ankyrin repeats J170_04256 SM00825 Beta-ketoacyl synthase J170_04261 SM00822 J170_04261 J170_04270 SM00563 Phosphate acyltransferases J170_04281 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J170_04281 SM00474 3'-5' exonuclease J170_04281 SM00475 5'-3' exonuclease J170_04281 SM00482 DNA polymerase A domain J170_04284 SM00912 haemagglutination activity domain J170_04288 SM00331 Sigma factor PP2C-like phosphatases J170_04288 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J170_04293 SM00240 Forkhead associated domain J170_04296 SM00028 Tetratricopeptide repeats J170_04298 SM00220 Serine/Threonine protein kinases, catalytic domain J170_04302 SM00965 Secretin and TonB N terminus short domain J170_04304 SM00915 Jacalin-like lectin domain J170_04310 SM00382 ATPases associated with a variety of cellular activities J170_04310 SM01086 C-terminal, D2-small domain, of ClpB protein J170_04318 SM00342 helix_turn_helix, arabinose operon control protein J170_04320 SM01266 J170_04320 J170_04323 SM00155 Phospholipase D. Active site motifs. J170_04352 SM00421 helix_turn_helix, Lux Regulon J170_04352 SM00448 cheY-homologous receiver domain J170_04362 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J170_04366 SM00346 helix_turn_helix isocitrate lyase regulation J170_04368 SM00091 PAS domain J170_04368 SM00387 Histidine kinase-like ATPases J170_04368 SM00388 His Kinase A (phosphoacceptor) domain J170_04368 SM00448 cheY-homologous receiver domain J170_04373 SM00564 beta-propeller repeat J170_04383 SM00382 ATPases associated with a variety of cellular activities J170_04385 SM00836 DALR anticodon binding domain J170_04387 SM00382 ATPases associated with a variety of cellular activities J170_04401 SM00354 helix_turn _helix lactose operon repressor J170_04404 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J170_04406 SM00758 J170_04406 J170_04406 SM01217 J170_04406 J170_04410 SM00612 J170_04410 J170_04417 SM01007 Class II Aldolase and Adducin N-terminal domain J170_04422 SM00633 Glycosyl hydrolase family 10 J170_04425 SM00633 Glycosyl hydrolase family 10 J170_04427 SM00633 Glycosyl hydrolase family 10 J170_04441 SM00829 Enoylreductase J170_04442 SM00563 Phosphate acyltransferases J170_04444 SM00354 helix_turn _helix lactose operon repressor J170_04448 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J170_04456 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_04456 SM00388 His Kinase A (phosphoacceptor) domain J170_04459 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J170_04459 SM01232 J170_04459 J170_04467 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_04467 SM00091 PAS domain J170_04478 SM00347 helix_turn_helix multiple antibiotic resistance protein J170_04485 SM00155 Phospholipase D. Active site motifs. J170_04501 SM00796 Allophanate hydrolase subunit 1 J170_04501 SM00797 Allophanate hydrolase subunit 2 J170_04501 SM00878 Biotin carboxylase C-terminal domain J170_04515 SM00382 ATPases associated with a variety of cellular activities J170_04525 SM00829 Enoylreductase J170_04533 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J170_04533 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J170_04533 SM00091 PAS domain J170_04533 SM00267 diguanylate cyclase J170_04539 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J170_04545 SM00014 Acid phosphatase homologues J170_04547 SM00028 Tetratricopeptide repeats