locus-tag class description KJA71_00005 PF00308 Bacterial dnaA protein KJA71_00005 PF08299 Bacterial dnaA protein helix-turn-helix KJA71_00005 PF11638 DnaA N-terminal domain KJA71_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KJA71_00010 PF02767 DNA polymerase III beta subunit, central domain KJA71_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KJA71_00015 PF02463 RecF/RecN/SMC N terminal domain KJA71_00020 PF00204 DNA gyrase B KJA71_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KJA71_00020 PF18053 DNA gyrase B subunit insert domain KJA71_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_00020 PF01751 Toprim domain KJA71_00030 PF01435 Peptidase family M48 KJA71_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KJA71_00045 PF01618 MotA/TolQ/ExbB proton channel family KJA71_00050 PF02472 Biopolymer transport protein ExbD/TolR KJA71_00055 PF02472 Biopolymer transport protein ExbD/TolR KJA71_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KJA71_00070 PF13091 PLD-like domain KJA71_00070 PF13396 Phospholipase_D-nuclease N-terminal KJA71_00085 PF04055 Radical SAM superfamily KJA71_00095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KJA71_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA71_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA71_00115 PF13180 PDZ domain KJA71_00115 PF03572 Peptidase family S41 KJA71_00120 PF01551 Peptidase family M23 KJA71_00130 PF04389 Peptidase family M28 KJA71_00140 PF00150 Cellulase (glycosyl hydrolase family 5) KJA71_00150 PF00150 Cellulase (glycosyl hydrolase family 5) KJA71_00160 PF00150 Cellulase (glycosyl hydrolase family 5) KJA71_00165 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_00165 PF00107 Zinc-binding dehydrogenase KJA71_00175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KJA71_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_00180 PF00310 Glutamine amidotransferases class-II KJA71_00180 PF04898 Glutamate synthase central domain KJA71_00180 PF01645 Conserved region in glutamate synthase KJA71_00180 PF01493 GXGXG motif KJA71_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_00210 PF03466 LysR substrate binding domain KJA71_00230 PF02397 Bacterial sugar transferase KJA71_00235 PF02350 UDP-N-acetylglucosamine 2-epimerase KJA71_00245 PF03808 Glycosyl transferase WecB/TagA/CpsF family KJA71_00250 PF13439 Glycosyltransferase Family 4 KJA71_00250 PF00534 Glycosyl transferases group 1 KJA71_00270 PF13537 Glutamine amidotransferase domain KJA71_00270 PF00733 Asparagine synthase KJA71_00285 PF16363 GDP-mannose 4,6 dehydratase KJA71_00300 PF00664 ABC transporter transmembrane region KJA71_00300 PF00005 ABC transporter KJA71_00310 PF00733 Asparagine synthase KJA71_00310 PF13537 Glutamine amidotransferase domain KJA71_00330 PF07475 HPr Serine kinase C-terminal domain KJA71_00330 PF02603 HPr Serine kinase N terminus KJA71_00335 PF00685 Sulfotransferase domain KJA71_00415 PF00270 DEAD/DEAH box helicase KJA71_00415 PF09369 Domain of unknown function (DUF1998) KJA71_00415 PF00271 Helicase conserved C-terminal domain KJA71_00420 PF03006 Haemolysin-III related KJA71_00440 PF00106 short chain dehydrogenase KJA71_00450 PF03466 LysR substrate binding domain KJA71_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_00465 PF02525 Flavodoxin-like fold KJA71_00520 PF05532 CsbD-like KJA71_00540 PF16485 Protealysin propeptide KJA71_00540 PF02868 Thermolysin metallopeptidase, alpha-helical domain KJA71_00540 PF01447 Thermolysin metallopeptidase, catalytic domain KJA71_00550 PF00293 NUDIX domain KJA71_00550 PF13344 Haloacid dehalogenase-like hydrolase KJA71_00565 PF00085 Thioredoxin KJA71_00570 PF00083 Sugar (and other) transporter KJA71_00570 PF08946 Osmosensory transporter coiled coil KJA71_00610 PF07726 ATPase family associated with various cellular activities (AAA) KJA71_00610 PF17863 AAA lid domain KJA71_00640 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KJA71_00645 PF00155 Aminotransferase class I and II KJA71_00650 PF00593 TonB dependent receptor KJA71_00650 PF07715 TonB-dependent Receptor Plug Domain KJA71_00660 PF07883 Cupin domain KJA71_00665 PF00171 Aldehyde dehydrogenase family KJA71_00685 PF02735 Ku70/Ku80 beta-barrel domain KJA71_00690 PF01070 FMN-dependent dehydrogenase KJA71_00695 PF00144 Beta-lactamase KJA71_00700 PF07730 Histidine kinase KJA71_00705 PF00196 Bacterial regulatory proteins, luxR family KJA71_00705 PF00072 Response regulator receiver domain KJA71_00725 PF00486 Transcriptional regulatory protein, C terminal KJA71_00725 PF18500 CadC C-terminal domain 1 KJA71_00730 PF12241 Trans-2-enoyl-CoA reductase catalytic region KJA71_00730 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KJA71_00730 PF07055 Enoyl reductase FAD binding domain KJA71_00740 PF00294 pfkB family carbohydrate kinase KJA71_00805 PF00128 Alpha amylase, catalytic domain KJA71_00805 PF11896 Domain of unknown function (DUF3416) KJA71_00810 PF00128 Alpha amylase, catalytic domain KJA71_00810 PF16657 Maltogenic Amylase, C-terminal domain KJA71_00815 PF00128 Alpha amylase, catalytic domain KJA71_00815 PF02806 Alpha amylase, C-terminal all-beta domain KJA71_00815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJA71_00825 PF00248 Aldo/keto reductase family KJA71_00830 PF00135 Carboxylesterase family KJA71_00835 PF07859 alpha/beta hydrolase fold KJA71_00835 PF13472 GDSL-like Lipase/Acylhydrolase family KJA71_00845 PF03480 Bacterial extracellular solute-binding protein, family 7 KJA71_00855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KJA71_00860 PF04616 Glycosyl hydrolases family 43 KJA71_00860 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KJA71_00865 PF00356 Bacterial regulatory proteins, lacI family KJA71_00870 PF04962 KduI/IolB family KJA71_00885 PF00657 GDSL-like Lipase/Acylhydrolase KJA71_00900 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KJA71_00905 PF01037 Lrp/AsnC ligand binding domain KJA71_00910 PF07715 TonB-dependent Receptor Plug Domain KJA71_00910 PF00593 TonB dependent receptor KJA71_00910 PF07660 Secretin and TonB N terminus short domain KJA71_00915 PF01734 Patatin-like phospholipase KJA71_00925 PF00005 ABC transporter KJA71_00940 PF00005 ABC transporter KJA71_00945 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_00955 PF03781 Sulfatase-modifying factor enzyme 1 KJA71_00955 PF12867 DinB superfamily KJA71_00975 PF01381 Helix-turn-helix KJA71_00995 PF10609 NUBPL iron-transfer P-loop NTPase KJA71_00995 PF01883 Iron-sulfur cluster assembly protein KJA71_01010 PF13091 PLD-like domain KJA71_01015 PF03061 Thioesterase superfamily KJA71_01045 PF00107 Zinc-binding dehydrogenase KJA71_01045 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_01055 PF02673 Bacitracin resistance protein BacA KJA71_01060 PF03951 Glutamine synthetase, beta-Grasp domain KJA71_01060 PF00120 Glutamine synthetase, catalytic domain KJA71_01065 PF00543 Nitrogen regulatory protein P-II KJA71_01070 PF00909 Ammonium Transporter Family KJA71_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_01075 PF00512 His Kinase A (phospho-acceptor) domain KJA71_01075 PF00989 PAS fold KJA71_01080 PF02954 Bacterial regulatory protein, Fis family KJA71_01080 PF00158 Sigma-54 interaction domain KJA71_01080 PF00072 Response regulator receiver domain KJA71_01085 PF00080 Copper/zinc superoxide dismutase (SODC) KJA71_01090 PF00080 Copper/zinc superoxide dismutase (SODC) KJA71_01100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA71_01110 PF02803 Thiolase, C-terminal domain KJA71_01110 PF00108 Thiolase, N-terminal domain KJA71_01145 PF00581 Rhodanese-like domain KJA71_01150 PF02556 Preprotein translocase subunit SecB KJA71_01155 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KJA71_01155 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KJA71_01170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJA71_01170 PF00205 Thiamine pyrophosphate enzyme, central domain KJA71_01170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KJA71_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_01180 PF00158 Sigma-54 interaction domain KJA71_01180 PF00072 Response regulator receiver domain KJA71_01180 PF02954 Bacterial regulatory protein, Fis family KJA71_01195 PF07690 Major Facilitator Superfamily KJA71_01200 PF00588 SpoU rRNA Methylase family KJA71_01215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KJA71_01215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJA71_01220 PF02661 Fic/DOC family KJA71_01220 PF13784 Fic/DOC family N-terminal KJA71_01225 PF00561 alpha/beta hydrolase fold KJA71_01230 PF03692 Putative zinc- or iron-chelating domain KJA71_01235 PF00501 AMP-binding enzyme KJA71_01240 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KJA71_01250 PF01820 D-ala D-ala ligase N-terminus KJA71_01250 PF07478 D-ala D-ala ligase C-terminus KJA71_01260 PF03109 ABC1 family KJA71_01270 PF00849 RNA pseudouridylate synthase KJA71_01280 PF00472 RF-1 domain KJA71_01290 PF01112 Asparaginase KJA71_01295 PF01432 Peptidase family M3 KJA71_01300 PF12706 Beta-lactamase superfamily domain KJA71_01320 PF12833 Helix-turn-helix domain KJA71_01325 PF00999 Sodium/hydrogen exchanger family KJA71_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_01330 PF03466 LysR substrate binding domain KJA71_01335 PF01274 Malate synthase KJA71_01340 PF00463 Isocitrate lyase family KJA71_01345 PF00990 Diguanylate cyclase, GGDEF domain KJA71_01365 PF00326 Prolyl oligopeptidase family KJA71_01370 PF02785 Biotin carboxylase C-terminal domain KJA71_01370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA71_01370 PF18140 Propionyl-coenzyme A carboxylase BT domain KJA71_01370 PF00364 Biotin-requiring enzyme KJA71_01370 PF00289 Biotin carboxylase, N-terminal domain KJA71_01375 PF01039 Carboxyl transferase domain KJA71_01380 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_01380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_01380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_01435 PF02492 CobW/HypB/UreG, nucleotide-binding domain KJA71_01435 PF07683 Cobalamin synthesis protein cobW C-terminal domain KJA71_01455 PF03969 AFG1-like ATPase KJA71_01460 PF01047 MarR family KJA71_01465 PF02566 OsmC-like protein KJA71_01490 PF00107 Zinc-binding dehydrogenase KJA71_01490 PF16884 N-terminal domain of oxidoreductase KJA71_01495 PF00248 Aldo/keto reductase family KJA71_01505 PF00849 RNA pseudouridylate synthase KJA71_01510 PF00593 TonB dependent receptor KJA71_01520 PF00270 DEAD/DEAH box helicase KJA71_01520 PF04408 Helicase associated domain (HA2) KJA71_01520 PF00271 Helicase conserved C-terminal domain KJA71_01520 PF08482 ATP-dependent helicase C-terminal KJA71_01525 PF07308 Protein of unknown function (DUF1456) KJA71_01530 PF00576 HIUase/Transthyretin family KJA71_01535 PF13454 FAD-NAD(P)-binding KJA71_01540 PF09349 OHCU decarboxylase KJA71_01540 PF01014 Uricase KJA71_01555 PF00266 Aminotransferase class-V KJA71_01560 PF01546 Peptidase family M20/M25/M40 KJA71_01560 PF07687 Peptidase dimerisation domain KJA71_01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_01565 PF03466 LysR substrate binding domain KJA71_01570 PF07690 Major Facilitator Superfamily KJA71_01585 PF01425 Amidase KJA71_01590 PF01156 Inosine-uridine preferring nucleoside hydrolase KJA71_01600 PF00860 Permease family KJA71_01605 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_01610 PF00355 Rieske [2Fe-2S] domain KJA71_01615 PF03466 LysR substrate binding domain KJA71_01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_01620 PF01026 TatD related DNase KJA71_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_01635 PF03466 LysR substrate binding domain KJA71_01640 PF07690 Major Facilitator Superfamily KJA71_01655 PF02146 Sir2 family KJA71_01660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA71_01665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA71_01665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA71_01675 PF00551 Formyl transferase KJA71_01680 PF00486 Transcriptional regulatory protein, C terminal KJA71_01680 PF00072 Response regulator receiver domain KJA71_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_01685 PF00512 His Kinase A (phospho-acceptor) domain KJA71_01685 PF00672 HAMP domain KJA71_01690 PF00529 HlyD membrane-fusion protein of T1SS KJA71_01690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_01695 PF00873 AcrB/AcrD/AcrF family KJA71_01700 PF02321 Outer membrane efflux protein KJA71_01710 PF02219 Methylenetetrahydrofolate reductase KJA71_01715 PF02677 Epoxyqueuosine reductase QueH KJA71_01720 PF03466 LysR substrate binding domain KJA71_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_01725 PF03358 NADPH-dependent FMN reductase KJA71_01735 PF08267 Cobalamin-independent synthase, N-terminal domain KJA71_01735 PF01717 Cobalamin-independent synthase, Catalytic domain KJA71_01740 PF03812 2-keto-3-deoxygluconate permease KJA71_01750 PF05368 NmrA-like family KJA71_01755 PF01638 HxlR-like helix-turn-helix KJA71_01780 PF00589 Phage integrase family KJA71_01780 PF13495 Phage integrase, N-terminal SAM-like domain KJA71_01785 PF00920 Dehydratase family KJA71_01800 PF00132 Bacterial transferase hexapeptide (six repeats) KJA71_01810 PF07690 Major Facilitator Superfamily KJA71_01815 PF01966 HD domain KJA71_01815 PF11871 Domain of unknown function (DUF3391) KJA71_01835 PF00171 Aldehyde dehydrogenase family KJA71_01845 PF01494 FAD binding domain KJA71_01855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KJA71_01855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KJA71_01860 PF00230 Major intrinsic protein KJA71_01865 PF01266 FAD dependent oxidoreductase KJA71_01865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KJA71_01870 PF00455 DeoR C terminal sensor domain KJA71_01870 PF08220 DeoR-like helix-turn-helix domain KJA71_01875 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_01875 PF00970 Oxidoreductase FAD-binding domain KJA71_01880 PF00355 Rieske [2Fe-2S] domain KJA71_01885 PF01144 Coenzyme A transferase KJA71_01890 PF01144 Coenzyme A transferase KJA71_01895 PF02803 Thiolase, C-terminal domain KJA71_01895 PF00108 Thiolase, N-terminal domain KJA71_01900 PF00775 Dioxygenase KJA71_01900 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KJA71_01910 PF10397 Adenylosuccinate lyase C-terminus KJA71_01910 PF00206 Lyase KJA71_01915 PF12146 Serine aminopeptidase, S33 KJA71_01920 PF02627 Carboxymuconolactone decarboxylase family KJA71_01930 PF01614 Bacterial transcriptional regulator KJA71_01930 PF09339 IclR helix-turn-helix domain KJA71_01940 PF07859 alpha/beta hydrolase fold KJA71_01945 PF10677 Protein of unknown function (DUF2490) KJA71_01950 PF13932 GidA associated domain KJA71_01950 PF01134 Glucose inhibited division protein A KJA71_01960 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_01980 PF13649 Methyltransferase domain KJA71_01990 PF12697 Alpha/beta hydrolase family KJA71_02000 PF00155 Aminotransferase class I and II KJA71_02005 PF06968 Biotin and Thiamin Synthesis associated domain KJA71_02005 PF04055 Radical SAM superfamily KJA71_02015 PF01040 UbiA prenyltransferase family KJA71_02035 PF05819 NolX protein KJA71_02075 PF01313 Bacterial export proteins, family 3 KJA71_02080 PF00813 FliP family KJA71_02095 PF00771 FHIPEP family KJA71_02100 PF01312 FlhB HrpN YscU SpaS Family KJA71_02115 PF01514 Secretory protein of YscJ/FliF family KJA71_02130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA71_02130 PF18269 T3SS EscN ATPase C-terminal domain KJA71_02130 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJA71_02140 PF01311 Bacterial export proteins, family 1 KJA71_02145 PF00263 Bacterial type II and III secretion system protein KJA71_02145 PF03958 Bacterial type II/III secretion system short domain KJA71_02155 PF01464 Transglycosylase SLT domain KJA71_02170 PF00924 Mechanosensitive ion channel KJA71_02170 PF12795 Mechanosensitive ion channel porin domain KJA71_02170 PF12794 Mechanosensitive ion channel inner membrane domain 1 KJA71_02175 PF00884 Sulfatase KJA71_02180 PF03109 ABC1 family KJA71_02185 PF05661 Protein of unknown function (DUF808) KJA71_02190 PF00990 Diguanylate cyclase, GGDEF domain KJA71_02195 PF08323 Starch synthase catalytic domain KJA71_02195 PF00534 Glycosyl transferases group 1 KJA71_02200 PF02806 Alpha amylase, C-terminal all-beta domain KJA71_02200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJA71_02200 PF00128 Alpha amylase, catalytic domain KJA71_02205 PF00128 Alpha amylase, catalytic domain KJA71_02205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJA71_02205 PF11941 Domain of unknown function (DUF3459) KJA71_02210 PF02446 4-alpha-glucanotransferase KJA71_02215 PF00128 Alpha amylase, catalytic domain KJA71_02225 PF00128 Alpha amylase, catalytic domain KJA71_02225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJA71_02230 PF13460 NAD(P)H-binding KJA71_02245 PF06903 VirK protein KJA71_02250 PF02321 Outer membrane efflux protein KJA71_02265 PF00873 AcrB/AcrD/AcrF family KJA71_02280 PF00270 DEAD/DEAH box helicase KJA71_02280 PF00271 Helicase conserved C-terminal domain KJA71_02285 PF02817 e3 binding domain KJA71_02285 PF00364 Biotin-requiring enzyme KJA71_02285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA71_02295 PF02780 Transketolase, C-terminal domain KJA71_02295 PF02779 Transketolase, pyrimidine binding domain KJA71_02300 PF00676 Dehydrogenase E1 component KJA71_02310 PF03301 Tryptophan 2,3-dioxygenase KJA71_02315 PF00854 POT family KJA71_02325 PF01047 MarR family KJA71_02330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA71_02340 PF04209 homogentisate 1,2-dioxygenase KJA71_02355 PF03334 Na+/H+ antiporter subunit KJA71_02360 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KJA71_02370 PF00361 Proton-conducting membrane transporter KJA71_02375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KJA71_02380 PF13244 Domain of unknown function (DUF4040) KJA71_02380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJA71_02380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KJA71_02380 PF00361 Proton-conducting membrane transporter KJA71_02395 PF01447 Thermolysin metallopeptidase, catalytic domain KJA71_02395 PF01483 Proprotein convertase P-domain KJA71_02395 PF07504 Fungalysin/Thermolysin Propeptide Motif KJA71_02395 PF02868 Thermolysin metallopeptidase, alpha-helical domain KJA71_02400 PF00182 Chitinase class I KJA71_02420 PF01259 SAICAR synthetase KJA71_02425 PF05099 Tellurite resistance protein TerB KJA71_02425 PF00226 DnaJ domain KJA71_02435 PF00834 Ribulose-phosphate 3 epimerase family KJA71_02440 PF00583 Acetyltransferase (GNAT) family KJA71_02445 PF00781 Diacylglycerol kinase catalytic domain KJA71_02450 PF04715 Anthranilate synthase component I, N terminal region KJA71_02450 PF00425 chorismate binding enzyme KJA71_02460 PF00117 Glutamine amidotransferase class-I KJA71_02470 PF02885 Glycosyl transferase family, helical bundle domain KJA71_02470 PF00591 Glycosyl transferase family, a/b domain KJA71_02475 PF00218 Indole-3-glycerol phosphate synthase KJA71_02485 PF00325 Bacterial regulatory proteins, crp family KJA71_02485 PF00027 Cyclic nucleotide-binding domain KJA71_02490 PF02675 S-adenosylmethionine decarboxylase KJA71_02495 PF00893 Small Multidrug Resistance protein KJA71_02500 PF03232 Ubiquinone biosynthesis protein COQ7 KJA71_02505 PF00572 Ribosomal protein L13 KJA71_02510 PF00380 Ribosomal protein S9/S16 KJA71_02525 PF00293 NUDIX domain KJA71_02535 PF00210 Ferritin-like domain KJA71_02540 PF00672 HAMP domain KJA71_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_02540 PF00512 His Kinase A (phospho-acceptor) domain KJA71_02540 PF01627 Hpt domain KJA71_02540 PF00072 Response regulator receiver domain KJA71_02540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA71_02545 PF00072 Response regulator receiver domain KJA71_02545 PF00486 Transcriptional regulatory protein, C terminal KJA71_02565 PF01521 Iron-sulphur cluster biosynthesis KJA71_02580 PF00293 NUDIX domain KJA71_02580 PF09297 NADH pyrophosphatase zinc ribbon domain KJA71_02580 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KJA71_02585 PF17113 Regulatory signalling modulator protein AmpE KJA71_02585 PF03186 CobD/Cbib protein KJA71_02600 PF07690 Major Facilitator Superfamily KJA71_02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_02605 PF03466 LysR substrate binding domain KJA71_02610 PF07690 Major Facilitator Superfamily KJA71_02615 PF12805 FUSC-like inner membrane protein yccS KJA71_02625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KJA71_02625 PF02843 Phosphoribosylglycinamide synthetase, C domain KJA71_02625 PF02844 Phosphoribosylglycinamide synthetase, N domain KJA71_02635 PF01808 AICARFT/IMPCHase bienzyme KJA71_02635 PF02142 MGS-like domain KJA71_02640 PF01066 CDP-alcohol phosphatidyltransferase KJA71_02645 PF12146 Serine aminopeptidase, S33 KJA71_02645 PF12147 Putative methyltransferase KJA71_02650 PF00782 Dual specificity phosphatase, catalytic domain KJA71_02680 PF02954 Bacterial regulatory protein, Fis family KJA71_02690 PF01381 Helix-turn-helix KJA71_02715 PF02785 Biotin carboxylase C-terminal domain KJA71_02715 PF00289 Biotin carboxylase, N-terminal domain KJA71_02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA71_02725 PF00364 Biotin-requiring enzyme KJA71_02730 PF01220 Dehydroquinase class II KJA71_02735 PF11412 Disulphide bond corrector protein DsbC KJA71_02735 PF02683 Cytochrome C biogenesis protein transmembrane region KJA71_02740 PF03091 CutA1 divalent ion tolerance protein KJA71_02755 PF01852 START domain KJA71_02765 PF00106 short chain dehydrogenase KJA71_02770 PF04231 Endonuclease I KJA71_02780 PF00166 Chaperonin 10 Kd subunit KJA71_02785 PF00118 TCP-1/cpn60 chaperonin family KJA71_02795 PF07715 TonB-dependent Receptor Plug Domain KJA71_02795 PF00593 TonB dependent receptor KJA71_02800 PF00793 DAHP synthetase I family KJA71_02815 PF08450 SMP-30/Gluconolactonase/LRE-like region KJA71_02825 PF08335 GlnD PII-uridylyltransferase KJA71_02825 PF03710 Glutamate-ammonia ligase adenylyltransferase KJA71_02830 PF02592 Putative vitamin uptake transporter KJA71_02845 PF00881 Nitroreductase family KJA71_02850 PF04264 YceI-like domain KJA71_02875 PF16957 Malonate decarboxylase, alpha subunit, transporter KJA71_02880 PF06857 Malonate decarboxylase delta subunit (MdcD) KJA71_02885 PF01039 Carboxyl transferase domain KJA71_02895 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KJA71_02900 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KJA71_02905 PF00698 Acyl transferase domain KJA71_02915 PF07729 FCD domain KJA71_02915 PF00392 Bacterial regulatory proteins, gntR family KJA71_02920 PF13419 Haloacid dehalogenase-like hydrolase KJA71_02950 PF07745 Glycosyl hydrolase family 53 KJA71_02955 PF00456 Transketolase, thiamine diphosphate binding domain KJA71_02955 PF17831 Pyruvate dehydrogenase E1 component middle domain KJA71_02960 PF00145 C-5 cytosine-specific DNA methylase KJA71_02970 PF00106 short chain dehydrogenase KJA71_02985 PF00106 short chain dehydrogenase KJA71_02995 PF13409 Glutathione S-transferase, N-terminal domain KJA71_03020 PF12823 Domain of unknown function (DUF3817) KJA71_03020 PF03176 MMPL family KJA71_03025 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KJA71_03025 PF00326 Prolyl oligopeptidase family KJA71_03030 PF07759 Protein of unknown function (DUF1615) KJA71_03035 PF00990 Diguanylate cyclase, GGDEF domain KJA71_03065 PF00892 EamA-like transporter family KJA71_03070 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA71_03080 PF00324 Amino acid permease KJA71_03090 PF01544 CorA-like Mg2+ transporter protein KJA71_03100 PF01204 Trehalase KJA71_03110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KJA71_03110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KJA71_03135 PF00990 Diguanylate cyclase, GGDEF domain KJA71_03135 PF08448 PAS fold KJA71_03135 PF08447 PAS fold KJA71_03135 PF00563 EAL domain KJA71_03140 PF00672 HAMP domain KJA71_03140 PF02203 Tar ligand binding domain homologue KJA71_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_03145 PF00150 Cellulase (glycosyl hydrolase family 5) KJA71_03145 PF00553 Cellulose binding domain KJA71_03150 PF01740 STAS domain KJA71_03150 PF00916 Sulfate permease family KJA71_03155 PF00990 Diguanylate cyclase, GGDEF domain KJA71_03165 PF13632 Glycosyl transferase family group 2 KJA71_03175 PF06580 Histidine kinase KJA71_03175 PF07694 5TMR of 5TMR-LYT KJA71_03180 PF04397 LytTr DNA-binding domain KJA71_03180 PF00072 Response regulator receiver domain KJA71_03185 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KJA71_03185 PF03900 Porphobilinogen deaminase, C-terminal domain KJA71_03210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KJA71_03210 PF00326 Prolyl oligopeptidase family KJA71_03220 PF00155 Aminotransferase class I and II KJA71_03225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KJA71_03225 PF00326 Prolyl oligopeptidase family KJA71_03230 PF04304 Protein of unknown function (DUF454) KJA71_03240 PF01678 Diaminopimelate epimerase KJA71_03250 PF02899 Phage integrase, N-terminal SAM-like domain KJA71_03250 PF00589 Phage integrase family KJA71_03255 PF00227 Proteasome subunit KJA71_03260 PF10431 C-terminal, D2-small domain, of ClpB protein KJA71_03260 PF07724 AAA domain (Cdc48 subfamily) KJA71_03260 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_03270 PF13673 Acetyltransferase (GNAT) domain KJA71_03275 PF13533 Biotin-lipoyl like KJA71_03285 PF01209 ubiE/COQ5 methyltransferase family KJA71_03290 PF03707 Bacterial signalling protein N terminal repeat KJA71_03290 PF00990 Diguanylate cyclase, GGDEF domain KJA71_03290 PF00563 EAL domain KJA71_03295 PF01433 Peptidase family M1 domain KJA71_03295 PF11838 ERAP1-like C-terminal domain KJA71_03310 PF13360 PQQ-like domain KJA71_03315 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA71_03330 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_03330 PF00107 Zinc-binding dehydrogenase KJA71_03340 PF00158 Sigma-54 interaction domain KJA71_03340 PF01590 GAF domain KJA71_03340 PF02954 Bacterial regulatory protein, Fis family KJA71_03345 PF00294 pfkB family carbohydrate kinase KJA71_03355 PF04085 rod shape-determining protein MreC KJA71_03365 PF00905 Penicillin binding protein transpeptidase domain KJA71_03365 PF03717 Penicillin-binding Protein dimerisation domain KJA71_03370 PF01098 Cell cycle protein KJA71_03375 PF00295 Glycosyl hydrolases family 28 KJA71_03380 PF13406 Transglycosylase SLT domain KJA71_03385 PF03330 Lytic transglycolase KJA71_03385 PF05036 Sporulation related domain KJA71_03390 PF07943 Penicillin-binding protein 5, C-terminal domain KJA71_03390 PF00768 D-alanyl-D-alanine carboxypeptidase KJA71_03400 PF04359 Protein of unknown function (DUF493) KJA71_03405 PF03099 Biotin/lipoate A/B protein ligase family KJA71_03410 PF04055 Radical SAM superfamily KJA71_03410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KJA71_03415 PF17804 Tail specific protease N-terminal domain KJA71_03415 PF11818 C-terminal domain of tail specific protease (DUF3340) KJA71_03415 PF03572 Peptidase family S41 KJA71_03415 PF00595 PDZ domain KJA71_03425 PF03466 LysR substrate binding domain KJA71_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_03435 PF01467 Cytidylyltransferase-like KJA71_03435 PF00293 NUDIX domain KJA71_03470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KJA71_03470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA71_03475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KJA71_03475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KJA71_03480 PF04972 BON domain KJA71_03485 PF01590 GAF domain KJA71_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_03485 PF00512 His Kinase A (phospho-acceptor) domain KJA71_03485 PF08446 PAS fold KJA71_03485 PF00360 Phytochrome region KJA71_03490 PF00072 Response regulator receiver domain KJA71_03495 PF00512 His Kinase A (phospho-acceptor) domain KJA71_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_03500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KJA71_03505 PF00106 short chain dehydrogenase KJA71_03545 PF03958 Bacterial type II/III secretion system short domain KJA71_03545 PF00263 Bacterial type II and III secretion system protein KJA71_03550 PF00437 Type II/IV secretion system protein KJA71_03555 PF00482 Type II secretion system (T2SS), protein F KJA71_03560 PF08334 Type II secretion system (T2SS), protein G KJA71_03560 PF07963 Prokaryotic N-terminal methylation motif KJA71_03565 PF12019 Type II transport protein GspH KJA71_03565 PF07963 Prokaryotic N-terminal methylation motif KJA71_03570 PF02501 Type II secretion system (T2SS), protein I KJA71_03570 PF07963 Prokaryotic N-terminal methylation motif KJA71_03575 PF07963 Prokaryotic N-terminal methylation motif KJA71_03575 PF11612 Type II secretion system (T2SS), protein J KJA71_03580 PF03934 Type II secretion system (T2SS), protein K KJA71_03620 PF07702 UTRA domain KJA71_03620 PF00392 Bacterial regulatory proteins, gntR family KJA71_03625 PF07690 Major Facilitator Superfamily KJA71_03630 PF00356 Bacterial regulatory proteins, lacI family KJA71_03635 PF01380 SIS domain KJA71_03640 PF01979 Amidohydrolase family KJA71_03650 PF01966 HD domain KJA71_03650 PF01743 Poly A polymerase head domain KJA71_03650 PF12627 Probable RNA and SrmB- binding site of polymerase A KJA71_03655 PF05199 GMC oxidoreductase KJA71_03655 PF00732 GMC oxidoreductase KJA71_03660 PF00171 Aldehyde dehydrogenase family KJA71_03665 PF02028 BCCT, betaine/carnitine/choline family transporter KJA71_03680 PF01323 DSBA-like thioredoxin domain KJA71_03690 PF00034 Cytochrome c KJA71_03695 PF01926 50S ribosome-binding GTPase KJA71_03700 PF10996 Beta-Casp domain KJA71_03700 PF00753 Metallo-beta-lactamase superfamily KJA71_03700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KJA71_03710 PF04107 Glutamate-cysteine ligase family 2(GCS2) KJA71_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_03715 PF00512 His Kinase A (phospho-acceptor) domain KJA71_03715 PF00672 HAMP domain KJA71_03720 PF00486 Transcriptional regulatory protein, C terminal KJA71_03720 PF00072 Response regulator receiver domain KJA71_03735 PF02583 Metal-sensitive transcriptional repressor KJA71_03740 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_03740 PF00107 Zinc-binding dehydrogenase KJA71_03745 PF04828 Glutathione-dependent formaldehyde-activating enzyme KJA71_03750 PF00756 Putative esterase KJA71_03755 PF00155 Aminotransferase class I and II KJA71_03755 PF00392 Bacterial regulatory proteins, gntR family KJA71_03760 PF02567 Phenazine biosynthesis-like protein KJA71_03765 PF00892 EamA-like transporter family KJA71_03775 PF00005 ABC transporter KJA71_03775 PF12848 ABC transporter KJA71_03785 PF00464 Serine hydroxymethyltransferase KJA71_03790 PF03477 ATP cone domain KJA71_03800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KJA71_03800 PF01872 RibD C-terminal domain KJA71_03810 PF00677 Lumazine binding domain KJA71_03815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KJA71_03815 PF00925 GTP cyclohydrolase II KJA71_03820 PF00885 6,7-dimethyl-8-ribityllumazine synthase KJA71_03825 PF01029 NusB family KJA71_03830 PF00586 AIR synthase related protein, N-terminal domain KJA71_03830 PF02769 AIR synthase related protein, C-terminal domain KJA71_03850 PF03814 Potassium-transporting ATPase A subunit KJA71_03860 PF02669 K+-transporting ATPase, c chain KJA71_03865 PF02702 Osmosensitive K+ channel His kinase sensor domain KJA71_03865 PF13493 Domain of unknown function (DUF4118) KJA71_03865 PF00512 His Kinase A (phospho-acceptor) domain KJA71_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_03865 PF13492 GAF domain KJA71_03870 PF00072 Response regulator receiver domain KJA71_03870 PF00486 Transcriptional regulatory protein, C terminal KJA71_03885 PF01565 FAD binding domain KJA71_03885 PF02913 FAD linked oxidases, C-terminal domain KJA71_03890 PF04307 LexA-binding, inner membrane-associated putative hydrolase KJA71_03895 PF02021 Uncharacterised protein family UPF0102 KJA71_03905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJA71_03930 PF02381 MraZ protein, putative antitoxin-like KJA71_03935 PF01795 MraW methylase family KJA71_03940 PF04999 Cell division protein FtsL KJA71_03945 PF03717 Penicillin-binding Protein dimerisation domain KJA71_03945 PF00905 Penicillin binding protein transpeptidase domain KJA71_03950 PF08245 Mur ligase middle domain KJA71_03950 PF02875 Mur ligase family, glutamate ligase domain KJA71_03950 PF01225 Mur ligase family, catalytic domain KJA71_03955 PF08245 Mur ligase middle domain KJA71_03955 PF02875 Mur ligase family, glutamate ligase domain KJA71_03955 PF01225 Mur ligase family, catalytic domain KJA71_03960 PF00953 Glycosyl transferase family 4 KJA71_03965 PF01098 Cell cycle protein KJA71_03970 PF04101 Glycosyltransferase family 28 C-terminal domain KJA71_03970 PF03033 Glycosyltransferase family 28 N-terminal domain KJA71_03975 PF02875 Mur ligase family, glutamate ligase domain KJA71_03975 PF01225 Mur ligase family, catalytic domain KJA71_03975 PF08245 Mur ligase middle domain KJA71_03980 PF01820 D-ala D-ala ligase N-terminus KJA71_03980 PF07478 D-ala D-ala ligase C-terminus KJA71_03985 PF08478 POTRA domain, FtsQ-type KJA71_03985 PF03799 Cell division protein FtsQ KJA71_03990 PF02491 SHS2 domain inserted in FTSA KJA71_03995 PF12327 FtsZ family, C-terminal domain KJA71_03995 PF00091 Tubulin/FtsZ family, GTPase domain KJA71_04000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KJA71_04010 PF01551 Peptidase family M23 KJA71_04010 PF08525 Opacity-associated protein A N-terminal motif KJA71_04010 PF01476 LysM domain KJA71_04015 PF07517 SecA DEAD-like domain KJA71_04015 PF02810 SEC-C motif KJA71_04015 PF07516 SecA Wing and Scaffold domain KJA71_04015 PF01043 SecA preprotein cross-linking domain KJA71_04020 PF00293 NUDIX domain KJA71_04030 PF02219 Methylenetetrahydrofolate reductase KJA71_04040 PF00698 Acyl transferase domain KJA71_04040 PF14765 Polyketide synthase dehydratase KJA71_04040 PF00550 Phosphopantetheine attachment site KJA71_04040 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_04040 PF00107 Zinc-binding dehydrogenase KJA71_04040 PF16197 Ketoacyl-synthetase C-terminal extension KJA71_04040 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_04040 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_04040 PF08659 KR domain KJA71_04045 PF09286 Pro-kumamolisin, activation domain KJA71_04045 PF00082 Subtilase family KJA71_04050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KJA71_04055 PF00128 Alpha amylase, catalytic domain KJA71_04085 PF13649 Methyltransferase domain KJA71_04090 PF05221 S-adenosyl-L-homocysteine hydrolase KJA71_04090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KJA71_04100 PF00311 Phosphoenolpyruvate carboxylase KJA71_04135 PF00328 Histidine phosphatase superfamily (branch 2) KJA71_04140 PF02772 S-adenosylmethionine synthetase, central domain KJA71_04140 PF00438 S-adenosylmethionine synthetase, N-terminal domain KJA71_04140 PF02773 S-adenosylmethionine synthetase, C-terminal domain KJA71_04150 PF13649 Methyltransferase domain KJA71_04155 PF01207 Dihydrouridine synthase (Dus) KJA71_04165 PF00294 pfkB family carbohydrate kinase KJA71_04170 PF07670 Nucleoside recognition KJA71_04170 PF07662 Na+ dependent nucleoside transporter C-terminus KJA71_04170 PF01773 Na+ dependent nucleoside transporter N-terminus KJA71_04175 PF00248 Aldo/keto reductase family KJA71_04185 PF07715 TonB-dependent Receptor Plug Domain KJA71_04185 PF00593 TonB dependent receptor KJA71_04205 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_04210 PF00005 ABC transporter KJA71_04220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KJA71_04230 PF00005 ABC transporter KJA71_04235 PF13472 GDSL-like Lipase/Acylhydrolase family KJA71_04240 PF00486 Transcriptional regulatory protein, C terminal KJA71_04240 PF00072 Response regulator receiver domain KJA71_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_04245 PF00512 His Kinase A (phospho-acceptor) domain KJA71_04245 PF08521 Two-component sensor kinase N-terminal KJA71_04255 PF01219 Prokaryotic diacylglycerol kinase KJA71_04275 PF01790 Prolipoprotein diacylglyceryl transferase KJA71_04280 PF00303 Thymidylate synthase KJA71_04290 PF00186 Dihydrofolate reductase KJA71_04295 PF00158 Sigma-54 interaction domain KJA71_04300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_04300 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA71_04305 PF00005 ABC transporter KJA71_04310 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_04320 PF00296 Luciferase-like monooxygenase KJA71_04325 PF03358 NADPH-dependent FMN reductase KJA71_04345 PF00296 Luciferase-like monooxygenase KJA71_04350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJA71_04355 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_04360 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_04360 PF12911 N-terminal TM domain of oligopeptide transport permease C KJA71_04365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJA71_04365 PF00005 ABC transporter KJA71_04370 PF00149 Calcineurin-like phosphoesterase KJA71_04375 PF04379 ApaG domain KJA71_04380 PF00398 Ribosomal RNA adenine dimethylase KJA71_04385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KJA71_04390 PF00639 PPIC-type PPIASE domain KJA71_04390 PF09312 SurA N-terminal domain KJA71_04395 PF04453 LPS transport system D KJA71_04395 PF03968 OstA-like protein KJA71_04410 PF00850 Histone deacetylase domain KJA71_04415 PF01923 Cobalamin adenosyltransferase KJA71_04430 PF01494 FAD binding domain KJA71_04435 PF01494 FAD binding domain KJA71_04455 PF07729 FCD domain KJA71_04455 PF00392 Bacterial regulatory proteins, gntR family KJA71_04460 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KJA71_04465 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit KJA71_04465 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KJA71_04470 PF03466 LysR substrate binding domain KJA71_04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_04475 PF00501 AMP-binding enzyme KJA71_04475 PF13193 AMP-binding enzyme C-terminal domain KJA71_04480 PF00171 Aldehyde dehydrogenase family KJA71_04485 PF00378 Enoyl-CoA hydratase/isomerase KJA71_04505 PF08450 SMP-30/Gluconolactonase/LRE-like region KJA71_04510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KJA71_04510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KJA71_04520 PF01728 FtsJ-like methyltransferase KJA71_04520 PF18125 RlmM ferredoxin-like domain KJA71_04545 PF00892 EamA-like transporter family KJA71_04550 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA71_04550 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KJA71_04565 PF00990 Diguanylate cyclase, GGDEF domain KJA71_04565 PF00072 Response regulator receiver domain KJA71_04570 PF00512 His Kinase A (phospho-acceptor) domain KJA71_04570 PF00072 Response regulator receiver domain KJA71_04570 PF01627 Hpt domain KJA71_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_04570 PF00672 HAMP domain KJA71_04570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA71_04575 PF00072 Response regulator receiver domain KJA71_04575 PF00196 Bacterial regulatory proteins, luxR family KJA71_04585 PF01625 Peptide methionine sulfoxide reductase KJA71_04595 PF00923 Transaldolase/Fructose-6-phosphate aldolase KJA71_04600 PF14760 Rnk N-terminus KJA71_04600 PF01272 Transcription elongation factor, GreA/GreB, C-term KJA71_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_04605 PF03466 LysR substrate binding domain KJA71_04610 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_04610 PF13192 Thioredoxin domain KJA71_04615 PF00578 AhpC/TSA family KJA71_04615 PF10417 C-terminal domain of 1-Cys peroxiredoxin KJA71_04620 PF05175 Methyltransferase small domain KJA71_04620 PF17827 PrmC N-terminal domain KJA71_04625 PF00561 alpha/beta hydrolase fold KJA71_04635 PF00293 NUDIX domain KJA71_04640 PF01367 5'-3' exonuclease, C-terminal SAM fold KJA71_04640 PF01612 3'-5' exonuclease KJA71_04640 PF00476 DNA polymerase family A KJA71_04640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KJA71_04670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KJA71_04670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJA71_04670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJA71_04695 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KJA71_04700 PF02233 NAD(P) transhydrogenase beta subunit KJA71_04715 PF01063 Amino-transferase class IV KJA71_04720 PF00082 Subtilase family KJA71_04720 PF04151 Bacterial pre-peptidase C-terminal domain KJA71_04725 PF04151 Bacterial pre-peptidase C-terminal domain KJA71_04725 PF00082 Subtilase family KJA71_04730 PF00082 Subtilase family KJA71_04730 PF04151 Bacterial pre-peptidase C-terminal domain KJA71_04735 PF04073 Aminoacyl-tRNA editing domain KJA71_04755 PF03358 NADPH-dependent FMN reductase KJA71_04760 PF03631 Virulence factor BrkB KJA71_04765 PF08534 Redoxin KJA71_04770 PF00708 Acylphosphatase KJA71_04780 PF03976 Polyphosphate kinase 2 (PPK2) KJA71_04785 PF00994 Probable molybdopterin binding domain KJA71_04795 PF03462 PCRF domain KJA71_04795 PF00472 RF-1 domain KJA71_04800 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KJA71_04800 PF01488 Shikimate / quinate 5-dehydrogenase KJA71_04800 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KJA71_04810 PF03550 Outer membrane lipoprotein LolB KJA71_04815 PF08544 GHMP kinases C terminal KJA71_04815 PF00288 GHMP kinases N terminal domain KJA71_04825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KJA71_04825 PF14572 Phosphoribosyl synthetase-associated domain KJA71_04830 PF14693 Ribosomal protein TL5, C-terminal domain KJA71_04830 PF01386 Ribosomal L25p family KJA71_04835 PF01195 Peptidyl-tRNA hydrolase KJA71_04840 PF06071 Protein of unknown function (DUF933) KJA71_04840 PF01926 50S ribosome-binding GTPase KJA71_04860 PF03144 Elongation factor Tu domain 2 KJA71_04860 PF03143 Elongation factor Tu C-terminal domain KJA71_04860 PF00009 Elongation factor Tu GTP binding domain KJA71_04870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KJA71_04875 PF00467 KOW motif KJA71_04875 PF02357 Transcription termination factor nusG KJA71_04880 PF00298 Ribosomal protein L11, RNA binding domain KJA71_04880 PF03946 Ribosomal protein L11, N-terminal domain KJA71_04885 PF00687 Ribosomal protein L1p/L10e family KJA71_04890 PF00466 Ribosomal protein L10 KJA71_04895 PF00542 Ribosomal protein L7/L12 C-terminal domain KJA71_04895 PF16320 Ribosomal protein L7/L12 dimerisation domain KJA71_04900 PF04563 RNA polymerase beta subunit KJA71_04900 PF04565 RNA polymerase Rpb2, domain 3 KJA71_04900 PF10385 RNA polymerase beta subunit external 1 domain KJA71_04900 PF00562 RNA polymerase Rpb2, domain 6 KJA71_04900 PF04560 RNA polymerase Rpb2, domain 7 KJA71_04900 PF04561 RNA polymerase Rpb2, domain 2 KJA71_04905 PF04997 RNA polymerase Rpb1, domain 1 KJA71_04905 PF00623 RNA polymerase Rpb1, domain 2 KJA71_04905 PF04983 RNA polymerase Rpb1, domain 3 KJA71_04905 PF05000 RNA polymerase Rpb1, domain 4 KJA71_04905 PF04998 RNA polymerase Rpb1, domain 5 KJA71_04910 PF00164 Ribosomal protein S12/S23 KJA71_04915 PF00177 Ribosomal protein S7p/S5e KJA71_04920 PF00009 Elongation factor Tu GTP binding domain KJA71_04920 PF00679 Elongation factor G C-terminus KJA71_04920 PF14492 Elongation Factor G, domain II KJA71_04920 PF03764 Elongation factor G, domain IV KJA71_04920 PF03144 Elongation factor Tu domain 2 KJA71_04925 PF03143 Elongation factor Tu C-terminal domain KJA71_04925 PF03144 Elongation factor Tu domain 2 KJA71_04925 PF00009 Elongation factor Tu GTP binding domain KJA71_04930 PF00338 Ribosomal protein S10p/S20e KJA71_04935 PF00297 Ribosomal protein L3 KJA71_04940 PF00573 Ribosomal protein L4/L1 family KJA71_04945 PF00276 Ribosomal protein L23 KJA71_04950 PF00181 Ribosomal Proteins L2, RNA binding domain KJA71_04950 PF03947 Ribosomal Proteins L2, C-terminal domain KJA71_04955 PF00203 Ribosomal protein S19 KJA71_04960 PF00237 Ribosomal protein L22p/L17e KJA71_04965 PF00189 Ribosomal protein S3, C-terminal domain KJA71_04965 PF07650 KH domain KJA71_04970 PF00252 Ribosomal protein L16p/L10e KJA71_04975 PF00831 Ribosomal L29 protein KJA71_04980 PF00366 Ribosomal protein S17 KJA71_04985 PF00238 Ribosomal protein L14p/L23e KJA71_04990 PF00467 KOW motif KJA71_04990 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KJA71_04995 PF00281 Ribosomal protein L5 KJA71_04995 PF00673 ribosomal L5P family C-terminus KJA71_05000 PF00253 Ribosomal protein S14p/S29e KJA71_05005 PF00410 Ribosomal protein S8 KJA71_05010 PF00347 Ribosomal protein L6 KJA71_05015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KJA71_05020 PF00333 Ribosomal protein S5, N-terminal domain KJA71_05020 PF03719 Ribosomal protein S5, C-terminal domain KJA71_05025 PF00327 Ribosomal protein L30p/L7e KJA71_05030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KJA71_05035 PF00344 SecY translocase KJA71_05040 PF00416 Ribosomal protein S13/S18 KJA71_05045 PF00411 Ribosomal protein S11 KJA71_05050 PF00163 Ribosomal protein S4/S9 N-terminal domain KJA71_05050 PF01479 S4 domain KJA71_05055 PF01000 RNA polymerase Rpb3/RpoA insert domain KJA71_05055 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KJA71_05055 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KJA71_05060 PF01196 Ribosomal protein L17 KJA71_05065 PF02600 Disulfide bond formation protein DsbB KJA71_05080 PF01474 Class-II DAHP synthetase family KJA71_05090 PF01425 Amidase KJA71_05100 PF00679 Elongation factor G C-terminus KJA71_05100 PF00009 Elongation factor Tu GTP binding domain KJA71_05100 PF03144 Elongation factor Tu domain 2 KJA71_05105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KJA71_05110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KJA71_05110 PF00056 lactate/malate dehydrogenase, NAD binding domain KJA71_05115 PF00043 Glutathione S-transferase, C-terminal domain KJA71_05115 PF02798 Glutathione S-transferase, N-terminal domain KJA71_05125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA71_05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_05130 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_05130 PF00107 Zinc-binding dehydrogenase KJA71_05135 PF00691 OmpA family KJA71_05135 PF05736 OprF membrane domain KJA71_05145 PF00849 RNA pseudouridylate synthase KJA71_05155 PF00155 Aminotransferase class I and II KJA71_05165 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_05170 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_05175 PF00005 ABC transporter KJA71_05175 PF17850 CysA C-terminal regulatory domain KJA71_05175 PF12857 TOBE-like domain KJA71_05185 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_05185 PF00107 Zinc-binding dehydrogenase KJA71_05200 PF05506 Domain of unknown function (DUF756) KJA71_05200 PF04185 Phosphoesterase family KJA71_05210 PF10459 Peptidase S46 KJA71_05215 PF00300 Histidine phosphatase superfamily (branch 1) KJA71_05220 PF02875 Mur ligase family, glutamate ligase domain KJA71_05220 PF08245 Mur ligase middle domain KJA71_05235 PF00156 Phosphoribosyl transferase domain KJA71_05240 PF04305 Protein of unknown function (DUF455) KJA71_05260 PF00149 Calcineurin-like phosphoesterase KJA71_05265 PF01569 PAP2 superfamily KJA71_05270 PF13439 Glycosyltransferase Family 4 KJA71_05270 PF00534 Glycosyl transferases group 1 KJA71_05275 PF02541 Ppx/GppA phosphatase family KJA71_05280 PF13089 Polyphosphate kinase N-terminal domain KJA71_05280 PF17941 Polyphosphate kinase C-terminal domain 1 KJA71_05280 PF13090 Polyphosphate kinase C-terminal domain 2 KJA71_05280 PF02503 Polyphosphate kinase middle domain KJA71_05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_05285 PF00512 His Kinase A (phospho-acceptor) domain KJA71_05285 PF00989 PAS fold KJA71_05285 PF11808 Phosphate regulon sensor protein PhoR KJA71_05290 PF00072 Response regulator receiver domain KJA71_05290 PF00486 Transcriptional regulatory protein, C terminal KJA71_05295 PF01435 Peptidase family M48 KJA71_05295 PF13181 Tetratricopeptide repeat KJA71_05300 PF00462 Glutaredoxin KJA71_05310 PF00180 Isocitrate/isopropylmalate dehydrogenase KJA71_05460 PF05698 Bacterial trigger factor protein (TF) C-terminus KJA71_05460 PF05697 Bacterial trigger factor protein (TF) KJA71_05465 PF00574 Clp protease KJA71_05470 PF07724 AAA domain (Cdc48 subfamily) KJA71_05470 PF10431 C-terminal, D2-small domain, of ClpB protein KJA71_05470 PF06689 ClpX C4-type zinc finger KJA71_05475 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_05475 PF05362 Lon protease (S16) C-terminal proteolytic domain KJA71_05475 PF02190 ATP-dependent protease La (LON) substrate-binding domain KJA71_05480 PF00216 Bacterial DNA-binding protein KJA71_05505 PF05257 CHAP domain KJA71_05505 PF01476 LysM domain KJA71_05510 PF00753 Metallo-beta-lactamase superfamily KJA71_05510 PF16123 Hydroxyacylglutathione hydrolase C-terminus KJA71_05520 PF00075 RNase H KJA71_05525 PF00929 Exonuclease KJA71_05545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KJA71_05555 PF00753 Metallo-beta-lactamase superfamily KJA71_05555 PF12706 Beta-lactamase superfamily domain KJA71_05560 PF06463 Molybdenum Cofactor Synthesis C KJA71_05560 PF04055 Radical SAM superfamily KJA71_05570 PF01967 MoaC family KJA71_05575 PF02597 ThiS family KJA71_05580 PF02391 MoaE protein KJA71_05625 PF12169 DNA polymerase III subunits gamma and tau domain III KJA71_05625 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KJA71_05625 PF12170 DNA polymerase III tau subunit V interacting with alpha KJA71_05630 PF02575 YbaB/EbfC DNA-binding family KJA71_05635 PF02132 RecR protein KJA71_05635 PF13662 Toprim domain KJA71_05640 PF01230 HIT domain KJA71_05650 PF13559 Domain of unknown function (DUF4129) KJA71_05650 PF01841 Transglutaminase-like superfamily KJA71_05650 PF11992 Domain of unknown function (DUF3488) KJA71_05660 PF17863 AAA lid domain KJA71_05660 PF07726 ATPase family associated with various cellular activities (AAA) KJA71_05680 PF02545 Maf-like protein KJA71_05685 PF02620 Large ribosomal RNA subunit accumulation protein YceD KJA71_05690 PF01783 Ribosomal L32p protein family KJA71_05695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KJA71_05695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJA71_05705 PF00698 Acyl transferase domain KJA71_05715 PF00550 Phosphopantetheine attachment site KJA71_05720 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_05720 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_05725 PF04715 Anthranilate synthase component I, N terminal region KJA71_05725 PF00425 chorismate binding enzyme KJA71_05730 PF02618 YceG-like family KJA71_05735 PF09115 DNA polymerase III, delta subunit, C terminal KJA71_05755 PF02954 Bacterial regulatory protein, Fis family KJA71_05755 PF06506 Propionate catabolism activator KJA71_05755 PF00158 Sigma-54 interaction domain KJA71_05765 PF00285 Citrate synthase, C-terminal domain KJA71_05770 PF00330 Aconitase family (aconitate hydratase) KJA71_05770 PF00694 Aconitase C-terminal domain KJA71_05775 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KJA71_05790 PF04303 PrpF protein KJA71_05795 PF07715 TonB-dependent Receptor Plug Domain KJA71_05795 PF00593 TonB dependent receptor KJA71_05805 PF01835 MG2 domain KJA71_05805 PF17962 Bacterial macroglobulin domain 6 KJA71_05805 PF00207 Alpha-2-macroglobulin family KJA71_05805 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KJA71_05805 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KJA71_05805 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KJA71_05805 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KJA71_05805 PF07703 Alpha-2-macroglobulin bait region domain KJA71_05820 PF06832 Penicillin-Binding Protein C-terminus Family KJA71_05820 PF00912 Transglycosylase KJA71_05820 PF00905 Penicillin binding protein transpeptidase domain KJA71_05830 PF08534 Redoxin KJA71_05840 PF01556 DnaJ C terminal domain KJA71_05840 PF00226 DnaJ domain KJA71_05845 PF00072 Response regulator receiver domain KJA71_05850 PF01145 SPFH domain / Band 7 family KJA71_05850 PF12221 Bacterial membrane protein N terminal KJA71_05855 PF01145 SPFH domain / Band 7 family KJA71_05865 PF00709 Adenylosuccinate synthetase KJA71_05870 PF11838 ERAP1-like C-terminal domain KJA71_05870 PF01433 Peptidase family M1 domain KJA71_05880 PF00440 Bacterial regulatory proteins, tetR family KJA71_05925 PF18766 SWI2/SNF2 ATPase KJA71_05925 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KJA71_05925 PF11867 Domain of unknown function (DUF3387) KJA71_05950 PF00300 Histidine phosphatase superfamily (branch 1) KJA71_05950 PF13456 Reverse transcriptase-like KJA71_05955 PF01256 Carbohydrate kinase KJA71_05965 PF00723 Glycosyl hydrolases family 15 KJA71_05975 PF07971 Glycosyl hydrolase family 92 KJA71_05975 PF17678 Glycosyl hydrolase family 92 N-terminal domain KJA71_05995 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_06015 PF17755 UvrA DNA-binding domain KJA71_06020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KJA71_06020 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KJA71_06025 PF03450 CO dehydrogenase flavoprotein C-terminal domain KJA71_06025 PF00941 FAD binding domain in molybdopterin dehydrogenase KJA71_06030 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_06030 PF01799 [2Fe-2S] binding domain KJA71_06065 PF01726 LexA DNA binding domain KJA71_06065 PF00717 Peptidase S24-like KJA71_06080 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJA71_06080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJA71_06080 PF14579 Helix-hairpin-helix motif KJA71_06080 PF02811 PHP domain KJA71_06090 PF00326 Prolyl oligopeptidase family KJA71_06100 PF03169 OPT oligopeptide transporter protein KJA71_06115 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KJA71_06115 PF07676 WD40-like Beta Propeller Repeat KJA71_06115 PF00326 Prolyl oligopeptidase family KJA71_06130 PF02311 AraC-like ligand binding domain KJA71_06130 PF12833 Helix-turn-helix domain KJA71_06145 PF00199 Catalase KJA71_06145 PF06628 Catalase-related immune-responsive KJA71_06145 PF18011 C-terminal domain found in long catalases KJA71_06150 PF00248 Aldo/keto reductase family KJA71_06155 PF00135 Carboxylesterase family KJA71_06160 PF02347 Glycine cleavage system P-protein KJA71_06165 PF07690 Major Facilitator Superfamily KJA71_06180 PF08019 Phosphoethanolamine transferase EptA/EptB KJA71_06180 PF00884 Sulfatase KJA71_06195 PF00072 Response regulator receiver domain KJA71_06195 PF00486 Transcriptional regulatory protein, C terminal KJA71_06200 PF08521 Two-component sensor kinase N-terminal KJA71_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06200 PF00512 His Kinase A (phospho-acceptor) domain KJA71_06210 PF03776 Septum formation topological specificity factor MinE KJA71_06215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KJA71_06220 PF03775 Septum formation inhibitor MinC, C-terminal domain KJA71_06220 PF05209 Septum formation inhibitor MinC, N-terminal domain KJA71_06230 PF07730 Histidine kinase KJA71_06235 PF00196 Bacterial regulatory proteins, luxR family KJA71_06235 PF00072 Response regulator receiver domain KJA71_06250 PF00730 HhH-GPD superfamily base excision DNA repair protein KJA71_06275 PF02222 ATP-grasp domain KJA71_06285 PF04376 Arginine-tRNA-protein transferase, N terminus KJA71_06285 PF04377 Arginine-tRNA-protein transferase, C terminus KJA71_06310 PF00378 Enoyl-CoA hydratase/isomerase KJA71_06325 PF17755 UvrA DNA-binding domain KJA71_06325 PF17760 UvrA interaction domain KJA71_06325 PF00005 ABC transporter KJA71_06330 PF00829 Ribosomal prokaryotic L21 protein KJA71_06335 PF01016 Ribosomal L27 protein KJA71_06340 PF01018 GTP1/OBG KJA71_06340 PF01926 50S ribosome-binding GTPase KJA71_06345 PF01649 Ribosomal protein S20 KJA71_06350 PF03023 Lipid II flippase MurJ KJA71_06355 PF06574 FAD synthetase KJA71_06355 PF01687 Riboflavin kinase KJA71_06360 PF08264 Anticodon-binding domain of tRNA KJA71_06360 PF00133 tRNA synthetases class I (I, L, M and V) KJA71_06360 PF06827 Zinc finger found in FPG and IleRS KJA71_06365 PF01252 Signal peptidase (SPase) II KJA71_06370 PF02401 LytB protein KJA71_06380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KJA71_06380 PF06481 COX Aromatic Rich Motif KJA71_06385 PF00115 Cytochrome C and Quinol oxidase polypeptide I KJA71_06390 PF00510 Cytochrome c oxidase subunit III KJA71_06395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KJA71_06405 PF18073 Rubredoxin metal binding domain KJA71_06410 PF05656 Protein of unknown function (DUF805) KJA71_06420 PF12833 Helix-turn-helix domain KJA71_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06425 PF00183 Hsp90 protein KJA71_06435 PF08678 Rsbr N terminal KJA71_06435 PF01740 STAS domain KJA71_06440 PF01740 STAS domain KJA71_06445 PF13581 Histidine kinase-like ATPase domain KJA71_06455 PF00072 Response regulator receiver domain KJA71_06455 PF17149 Periplasmic sensor domain found in signal transduction proteins KJA71_06455 PF00672 HAMP domain KJA71_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06455 PF00512 His Kinase A (phospho-acceptor) domain KJA71_06455 PF01627 Hpt domain KJA71_06460 PF00072 Response regulator receiver domain KJA71_06460 PF13188 PAS domain KJA71_06460 PF08448 PAS fold KJA71_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06460 PF00512 His Kinase A (phospho-acceptor) domain KJA71_06465 PF04616 Glycosyl hydrolases family 43 KJA71_06465 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KJA71_06470 PF00593 TonB dependent receptor KJA71_06470 PF07715 TonB-dependent Receptor Plug Domain KJA71_06475 PF00085 Thioredoxin KJA71_06480 PF07237 Protein of unknown function (DUF1428) KJA71_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06485 PF00512 His Kinase A (phospho-acceptor) domain KJA71_06485 PF02702 Osmosensitive K+ channel His kinase sensor domain KJA71_06485 PF13493 Domain of unknown function (DUF4118) KJA71_06485 PF13492 GAF domain KJA71_06490 PF01339 CheB methylesterase KJA71_06495 PF01739 CheR methyltransferase, SAM binding domain KJA71_06495 PF03705 CheR methyltransferase, all-alpha domain KJA71_06500 PF00512 His Kinase A (phospho-acceptor) domain KJA71_06500 PF00672 HAMP domain KJA71_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06500 PF01627 Hpt domain KJA71_06500 PF00072 Response regulator receiver domain KJA71_06500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA71_06505 PF00072 Response regulator receiver domain KJA71_06505 PF13426 PAS domain KJA71_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_06510 PF00072 Response regulator receiver domain KJA71_06515 PF00722 Glycosyl hydrolases family 16 KJA71_06525 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KJA71_06530 PF01263 Aldose 1-epimerase KJA71_06535 PF01578 Cytochrome C assembly protein KJA71_06540 PF00448 SRP54-type protein, GTPase domain KJA71_06540 PF02881 SRP54-type protein, helical bundle domain KJA71_06540 PF02978 Signal peptide binding domain KJA71_06545 PF03060 Nitronate monooxygenase KJA71_06550 PF01063 Amino-transferase class IV KJA71_06555 PF00886 Ribosomal protein S16 KJA71_06560 PF05239 PRC-barrel domain KJA71_06560 PF01782 RimM N-terminal domain KJA71_06565 PF01746 tRNA (Guanine-1)-methyltransferase KJA71_06570 PF01245 Ribosomal protein L19 KJA71_06590 PF01479 S4 domain KJA71_06595 PF00141 Peroxidase KJA71_06605 PF05192 MutS domain III KJA71_06605 PF05188 MutS domain II KJA71_06605 PF05190 MutS family domain IV KJA71_06605 PF01624 MutS domain I KJA71_06605 PF00488 MutS domain V KJA71_06615 PF03527 RHS protein KJA71_06615 PF05593 RHS Repeat KJA71_06635 PF16355 Domain of unknown function (DUF4982) KJA71_06635 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KJA71_06635 PF02837 Glycosyl hydrolases family 2, sugar binding domain KJA71_06635 PF00703 Glycosyl hydrolases family 2 KJA71_06635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KJA71_06640 PF07745 Glycosyl hydrolase family 53 KJA71_06650 PF01381 Helix-turn-helix KJA71_06650 PF06114 IrrE N-terminal-like domain KJA71_06650 PF09856 Predicted transcriptional regulator (DUF2083) KJA71_06655 PF00171 Aldehyde dehydrogenase family KJA71_06660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_06660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_06660 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_06665 PF00378 Enoyl-CoA hydratase/isomerase KJA71_06670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA71_06670 PF00378 Enoyl-CoA hydratase/isomerase KJA71_06670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA71_06675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA71_06675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA71_06680 PF01545 Cation efflux family KJA71_06685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA71_06685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA71_06685 PF00378 Enoyl-CoA hydratase/isomerase KJA71_06690 PF08281 Sigma-70, region 4 KJA71_06690 PF04542 Sigma-70 region 2 KJA71_06700 PF13180 PDZ domain KJA71_06705 PF03144 Elongation factor Tu domain 2 KJA71_06705 PF06421 GTP-binding protein LepA C-terminus KJA71_06705 PF00679 Elongation factor G C-terminus KJA71_06705 PF00009 Elongation factor Tu GTP binding domain KJA71_06710 PF10502 Signal peptidase, peptidase S26 KJA71_06720 PF14622 Ribonuclease-III-like KJA71_06720 PF00035 Double-stranded RNA binding motif KJA71_06725 PF01926 50S ribosome-binding GTPase KJA71_06725 PF07650 KH domain KJA71_06730 PF02565 Recombination protein O C terminal KJA71_06730 PF11967 Recombination protein O N terminal KJA71_06740 PF05958 tRNA (Uracil-5-)-methyltransferase KJA71_06745 PF01928 CYTH domain KJA71_06750 PF01323 DSBA-like thioredoxin domain KJA71_06755 PF01593 Flavin containing amine oxidoreductase KJA71_06760 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KJA71_06765 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_06770 PF00156 Phosphoribosyl transferase domain KJA71_06775 PF01048 Phosphorylase superfamily KJA71_06780 PF00313 'Cold-shock' DNA-binding domain KJA71_06785 PF01494 FAD binding domain KJA71_06795 PF00270 DEAD/DEAH box helicase KJA71_06795 PF08494 DEAD/H associated KJA71_06795 PF00271 Helicase conserved C-terminal domain KJA71_06800 PF01068 ATP dependent DNA ligase domain KJA71_06800 PF04679 ATP dependent DNA ligase C terminal region KJA71_06800 PF04675 DNA ligase N terminus KJA71_06810 PF04675 DNA ligase N terminus KJA71_06810 PF04679 ATP dependent DNA ligase C terminal region KJA71_06810 PF01068 ATP dependent DNA ligase domain KJA71_06825 PF00990 Diguanylate cyclase, GGDEF domain KJA71_06825 PF00072 Response regulator receiver domain KJA71_06840 PF02803 Thiolase, C-terminal domain KJA71_06840 PF00108 Thiolase, N-terminal domain KJA71_06845 PF03797 Autotransporter beta-domain KJA71_06845 PF12951 Passenger-associated-transport-repeat KJA71_06845 PF00082 Subtilase family KJA71_06850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KJA71_06850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KJA71_06865 PF01863 Protein of unknown function DUF45 KJA71_06870 PF07043 Protein of unknown function (DUF1328) KJA71_06880 PF01258 Prokaryotic dksA/traR C4-type zinc finger KJA71_06900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA71_06910 PF03831 PhnA domain KJA71_06910 PF08274 PhnA Zinc-Ribbon KJA71_06915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA71_06920 PF07690 Major Facilitator Superfamily KJA71_06955 PF03706 Lysylphosphatidylglycerol synthase TM region KJA71_06955 PF09924 Uncharacterised conserved protein (DUF2156) KJA71_06965 PF01042 Endoribonuclease L-PSP KJA71_07010 PF04542 Sigma-70 region 2 KJA71_07010 PF04545 Sigma-70, region 4 KJA71_07025 PF04060 Putative Fe-S cluster KJA71_07035 PF09334 tRNA synthetases class I (M) KJA71_07035 PF01588 Putative tRNA binding domain KJA71_07050 PF13732 Domain of unknown function (DUF4162) KJA71_07050 PF00005 ABC transporter KJA71_07055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA71_07060 PF00324 Amino acid permease KJA71_07065 PF02574 Homocysteine S-methyltransferase KJA71_07075 PF02592 Putative vitamin uptake transporter KJA71_07095 PF03551 Transcriptional regulator PadR-like family KJA71_07115 PF03653 Uncharacterised protein family (UPF0093) KJA71_07130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KJA71_07135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJA71_07135 PF01336 OB-fold nucleic acid binding domain KJA71_07135 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJA71_07135 PF14579 Helix-hairpin-helix motif KJA71_07135 PF02811 PHP domain KJA71_07140 PF01351 Ribonuclease HII KJA71_07145 PF02684 Lipid-A-disaccharide synthetase KJA71_07150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KJA71_07150 PF00132 Bacterial transferase hexapeptide (six repeats) KJA71_07155 PF07977 FabA-like domain KJA71_07160 PF00132 Bacterial transferase hexapeptide (six repeats) KJA71_07160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KJA71_07170 PF07244 Surface antigen variable number repeat KJA71_07170 PF01103 Surface antigen KJA71_07175 PF17820 PDZ domain KJA71_07175 PF02163 Peptidase family M50 KJA71_07180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KJA71_07180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KJA71_07180 PF13288 DXP reductoisomerase C-terminal domain KJA71_07190 PF01255 Putative undecaprenyl diphosphate synthase KJA71_07195 PF01765 Ribosome recycling factor KJA71_07200 PF00696 Amino acid kinase family KJA71_07205 PF00072 Response regulator receiver domain KJA71_07205 PF00990 Diguanylate cyclase, GGDEF domain KJA71_07210 PF00889 Elongation factor TS KJA71_07215 PF00318 Ribosomal protein S2 KJA71_07250 PF00557 Metallopeptidase family M24 KJA71_07255 PF01909 Nucleotidyltransferase domain KJA71_07255 PF01966 HD domain KJA71_07255 PF08335 GlnD PII-uridylyltransferase KJA71_07260 PF00132 Bacterial transferase hexapeptide (six repeats) KJA71_07260 PF14602 Hexapeptide repeat of succinyl-transferase KJA71_07260 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KJA71_07265 PF03960 ArsC family KJA71_07270 PF01546 Peptidase family M20/M25/M40 KJA71_07270 PF07687 Peptidase dimerisation domain KJA71_07275 PF00733 Asparagine synthase KJA71_07275 PF13537 Glutamine amidotransferase domain KJA71_07285 PF07715 TonB-dependent Receptor Plug Domain KJA71_07285 PF00593 TonB dependent receptor KJA71_07295 PF00210 Ferritin-like domain KJA71_07300 PF05724 Thiopurine S-methyltransferase (TPMT) KJA71_07310 PF00521 DNA gyrase/topoisomerase IV, subunit A KJA71_07310 PF03989 DNA gyrase C-terminal domain, beta-propeller KJA71_07325 PF02321 Outer membrane efflux protein KJA71_07330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_07330 PF00529 HlyD membrane-fusion protein of T1SS KJA71_07335 PF07690 Major Facilitator Superfamily KJA71_07345 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_07345 PF14310 Fibronectin type III-like domain KJA71_07345 PF01915 Glycosyl hydrolase family 3 C-terminal domain KJA71_07355 PF00854 POT family KJA71_07380 PF12802 MarR family KJA71_07385 PF01432 Peptidase family M3 KJA71_07390 PF00255 Glutathione peroxidase KJA71_07395 PF00970 Oxidoreductase FAD-binding domain KJA71_07395 PF00175 Oxidoreductase NAD-binding domain KJA71_07400 PF00005 ABC transporter KJA71_07405 PF05681 Fumarate hydratase (Fumerase) KJA71_07405 PF05683 Fumarase C-terminus KJA71_07415 PF00484 Carbonic anhydrase KJA71_07420 PF02253 Phospholipase A1 KJA71_07430 PF00313 'Cold-shock' DNA-binding domain KJA71_07445 PF00899 ThiF family KJA71_07465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_07465 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_07465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_07475 PF00043 Glutathione S-transferase, C-terminal domain KJA71_07475 PF02798 Glutathione S-transferase, N-terminal domain KJA71_07480 PF00733 Asparagine synthase KJA71_07480 PF13537 Glutamine amidotransferase domain KJA71_07485 PF03358 NADPH-dependent FMN reductase KJA71_07490 PF00772 DnaB-like helicase N terminal domain KJA71_07490 PF03796 DnaB-like helicase C terminal domain KJA71_07495 PF00875 DNA photolyase KJA71_07495 PF03441 FAD binding domain of DNA photolyase KJA71_07500 PF00691 OmpA family KJA71_07500 PF05736 OprF membrane domain KJA71_07505 PF03466 LysR substrate binding domain KJA71_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_07520 PF00529 HlyD membrane-fusion protein of T1SS KJA71_07520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_07525 PF00873 AcrB/AcrD/AcrF family KJA71_07530 PF00106 short chain dehydrogenase KJA71_07535 PF02321 Outer membrane efflux protein KJA71_07540 PF00990 Diguanylate cyclase, GGDEF domain KJA71_07550 PF00990 Diguanylate cyclase, GGDEF domain KJA71_07690 PF00082 Subtilase family KJA71_07695 PF01668 SmpB protein KJA71_07700 PF03364 Polyketide cyclase / dehydrase and lipid transport KJA71_07705 PF03658 RnfH family Ubiquitin KJA71_07710 PF04355 SmpA / OmlA family KJA71_07715 PF01475 Ferric uptake regulator family KJA71_07720 PF02463 RecF/RecN/SMC N terminal domain KJA71_07725 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KJA71_07725 PF01628 HrcA protein C terminal domain KJA71_07730 PF01025 GrpE KJA71_07735 PF00012 Hsp70 protein KJA71_07740 PF00684 DnaJ central domain KJA71_07740 PF00226 DnaJ domain KJA71_07740 PF01556 DnaJ C terminal domain KJA71_07750 PF08543 Phosphomethylpyrimidine kinase KJA71_07775 PF00664 ABC transporter transmembrane region KJA71_07775 PF00005 ABC transporter KJA71_07775 PF03412 Peptidase C39 family KJA71_07780 PF03466 LysR substrate binding domain KJA71_07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_07785 PF00005 ABC transporter KJA71_07785 PF00664 ABC transporter transmembrane region KJA71_07790 PF01205 Uncharacterized protein family UPF0029 KJA71_07795 PF03641 Possible lysine decarboxylase KJA71_07800 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_07800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA71_07805 PF02817 e3 binding domain KJA71_07805 PF00364 Biotin-requiring enzyme KJA71_07805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA71_07810 PF02779 Transketolase, pyrimidine binding domain KJA71_07810 PF16078 2-oxoglutarate dehydrogenase N-terminus KJA71_07810 PF16870 2-oxoglutarate dehydrogenase C-terminal KJA71_07810 PF00676 Dehydrogenase E1 component KJA71_07820 PF08007 Cupin superfamily protein KJA71_07830 PF00206 Lyase KJA71_07830 PF08328 Adenylosuccinate lyase C-terminal KJA71_07840 PF03471 Transporter associated domain KJA71_07840 PF00571 CBS domain KJA71_07840 PF01595 Cyclin M transmembrane N-terminal domain KJA71_07845 PF10415 Fumarase C C-terminus KJA71_07845 PF00206 Lyase KJA71_07870 PF00005 ABC transporter KJA71_07875 PF00392 Bacterial regulatory proteins, gntR family KJA71_07885 PF00255 Glutathione peroxidase KJA71_07890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KJA71_07890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA71_07895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KJA71_07895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KJA71_07895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KJA71_07900 PF04102 SlyX KJA71_07915 PF00356 Bacterial regulatory proteins, lacI family KJA71_07920 PF07690 Major Facilitator Superfamily KJA71_07925 PF00294 pfkB family carbohydrate kinase KJA71_07935 PF02574 Homocysteine S-methyltransferase KJA71_07935 PF00809 Pterin binding enzyme KJA71_07935 PF02310 B12 binding domain KJA71_07935 PF02965 Vitamin B12 dependent methionine synthase, activation domain KJA71_07935 PF02607 B12 binding domain KJA71_07940 PF02574 Homocysteine S-methyltransferase KJA71_07940 PF00809 Pterin binding enzyme KJA71_07945 PF01209 ubiE/COQ5 methyltransferase family KJA71_07950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_07950 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_07950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_07955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_07955 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_07955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_07960 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_07965 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_07980 PF17876 Cold shock domain KJA71_07980 PF08461 Ribonuclease R winged-helix domain KJA71_07980 PF00575 S1 RNA binding domain KJA71_07980 PF00773 RNB domain KJA71_07980 PF08206 Ribonuclease B OB domain KJA71_07990 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJA71_07990 PF00588 SpoU rRNA Methylase family KJA71_08000 PF00929 Exonuclease KJA71_08010 PF01895 PhoU domain KJA71_08015 PF00005 ABC transporter KJA71_08020 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_08025 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_08030 PF12849 PBP superfamily domain KJA71_08035 PF12849 PBP superfamily domain KJA71_08050 PF00484 Carbonic anhydrase KJA71_08055 PF00916 Sulfate permease family KJA71_08055 PF01740 STAS domain KJA71_08060 PF10576 Iron-sulfur binding domain of endonuclease III KJA71_08060 PF00730 HhH-GPD superfamily base excision DNA repair protein KJA71_08060 PF00633 Helix-hairpin-helix motif KJA71_08070 PF00378 Enoyl-CoA hydratase/isomerase KJA71_08075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA71_08075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KJA71_08080 PF00293 NUDIX domain KJA71_08085 PF00581 Rhodanese-like domain KJA71_08115 PF16326 ABC transporter C-terminal domain KJA71_08115 PF12848 ABC transporter KJA71_08115 PF00005 ABC transporter KJA71_08125 PF10672 S-adenosylmethionine-dependent methyltransferase KJA71_08125 PF02926 THUMP domain KJA71_08125 PF01170 Putative RNA methylase family UPF0020 KJA71_08130 PF01513 ATP-NAD kinase KJA71_08155 PF08411 Exonuclease C-terminal KJA71_08155 PF00929 Exonuclease KJA71_08165 PF01494 FAD binding domain KJA71_08170 PF00266 Aminotransferase class-V KJA71_08180 PF06052 3-hydroxyanthranilic acid dioxygenase KJA71_08185 PF00484 Carbonic anhydrase KJA71_08230 PF00196 Bacterial regulatory proteins, luxR family KJA71_08230 PF00072 Response regulator receiver domain KJA71_08250 PF04299 Putative FMN-binding domain KJA71_08270 PF00152 tRNA synthetases class II (D, K and N) KJA71_08270 PF01336 OB-fold nucleic acid binding domain KJA71_08275 PF01521 Iron-sulphur cluster biosynthesis KJA71_08280 PF01250 Ribosomal protein S6 KJA71_08285 PF01084 Ribosomal protein S18 KJA71_08290 PF03948 Ribosomal protein L9, C-terminal domain KJA71_08290 PF01281 Ribosomal protein L9, N-terminal domain KJA71_08295 PF02463 RecF/RecN/SMC N terminal domain KJA71_08300 PF04354 ZipA, C-terminal FtsZ-binding domain KJA71_08310 PF00155 Aminotransferase class I and II KJA71_08315 PF00533 BRCA1 C Terminus (BRCT) domain KJA71_08315 PF01653 NAD-dependent DNA ligase adenylation domain KJA71_08315 PF03120 NAD-dependent DNA ligase OB-fold domain KJA71_08315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KJA71_08315 PF12826 Helix-hairpin-helix motif KJA71_08320 PF00152 tRNA synthetases class II (D, K and N) KJA71_08335 PF01008 Initiation factor 2 subunit family KJA71_08340 PF00521 DNA gyrase/topoisomerase IV, subunit A KJA71_08340 PF03989 DNA gyrase C-terminal domain, beta-propeller KJA71_08345 PF13360 PQQ-like domain KJA71_08355 PF01175 Urocanase Rossmann-like domain KJA71_08355 PF17392 Urocanase C-terminal domain KJA71_08355 PF17391 Urocanase N-terminal domain KJA71_08365 PF00221 Aromatic amino acid lyase KJA71_08370 PF07969 Amidohydrolase family KJA71_08385 PF00392 Bacterial regulatory proteins, gntR family KJA71_08385 PF07702 UTRA domain KJA71_08415 PF01794 Ferric reductase like transmembrane component KJA71_08420 PF00174 Oxidoreductase molybdopterin binding domain KJA71_08425 PF00266 Aminotransferase class-V KJA71_08430 PF00800 Prephenate dehydratase KJA71_08430 PF01817 Chorismate mutase type II KJA71_08430 PF01842 ACT domain KJA71_08435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJA71_08445 PF03544 Gram-negative bacterial TonB protein C-terminal KJA71_08450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA71_08450 PF02403 Seryl-tRNA synthetase N-terminal domain KJA71_08455 PF02525 Flavodoxin-like fold KJA71_08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_08460 PF03466 LysR substrate binding domain KJA71_08525 PF00672 HAMP domain KJA71_08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_08525 PF02203 Tar ligand binding domain homologue KJA71_08530 PF01494 FAD binding domain KJA71_08540 PF08448 PAS fold KJA71_08540 PF13188 PAS domain KJA71_08540 PF00072 Response regulator receiver domain KJA71_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_08540 PF00512 His Kinase A (phospho-acceptor) domain KJA71_08545 PF01627 Hpt domain KJA71_08545 PF00672 HAMP domain KJA71_08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_08545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA71_08545 PF00072 Response regulator receiver domain KJA71_08545 PF00512 His Kinase A (phospho-acceptor) domain KJA71_08550 PF06745 KaiC KJA71_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_08555 PF13426 PAS domain KJA71_08555 PF00072 Response regulator receiver domain KJA71_08565 PF03918 Cytochrome C biogenesis protein KJA71_08570 PF08534 Redoxin KJA71_08575 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KJA71_08575 PF01578 Cytochrome C assembly protein KJA71_08580 PF03100 CcmE KJA71_08590 PF01578 Cytochrome C assembly protein KJA71_08595 PF00082 Subtilase family KJA71_08605 PF08281 Sigma-70, region 4 KJA71_08605 PF04542 Sigma-70 region 2 KJA71_08615 PF00034 Cytochrome c KJA71_08630 PF05523 WxcM-like, C-terminal KJA71_08650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KJA71_08655 PF01943 Polysaccharide biosynthesis protein KJA71_08660 PF00535 Glycosyl transferase family 2 KJA71_08675 PF08241 Methyltransferase domain KJA71_08695 PF13579 Glycosyl transferase 4-like domain KJA71_08695 PF00534 Glycosyl transferases group 1 KJA71_08710 PF00005 ABC transporter KJA71_08715 PF00664 ABC transporter transmembrane region KJA71_08715 PF00005 ABC transporter KJA71_08720 PF07690 Major Facilitator Superfamily KJA71_08725 PF00296 Luciferase-like monooxygenase KJA71_08740 PF03471 Transporter associated domain KJA71_08740 PF01595 Cyclin M transmembrane N-terminal domain KJA71_08740 PF00571 CBS domain KJA71_08750 PF01384 Phosphate transporter family KJA71_08765 PF01751 Toprim domain KJA71_08765 PF00986 DNA gyrase B subunit, carboxyl terminus KJA71_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_08765 PF00204 DNA gyrase B KJA71_08775 PF00117 Glutamine amidotransferase class-I KJA71_08775 PF06418 CTP synthase N-terminus KJA71_08780 PF00793 DAHP synthetase I family KJA71_08790 PF03952 Enolase, N-terminal domain KJA71_08790 PF00113 Enolase, C-terminal TIM barrel domain KJA71_08795 PF04977 Septum formation initiator KJA71_08800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KJA71_08805 PF02542 YgbB family KJA71_08810 PF01142 tRNA pseudouridine synthase D (TruD) KJA71_08815 PF01713 Smr domain KJA71_08820 PF01975 Survival protein SurE KJA71_08830 PF09335 SNARE associated Golgi protein KJA71_08835 PF01551 Peptidase family M23 KJA71_08835 PF01476 LysM domain KJA71_08840 PF04430 Protein of unknown function (DUF498/DUF598) KJA71_08845 PF01985 CRS1 / YhbY (CRM) domain KJA71_08850 PF01728 FtsJ-like methyltransferase KJA71_08855 PF01434 Peptidase family M41 KJA71_08855 PF06480 FtsH Extracellular KJA71_08855 PF17862 AAA+ lid domain KJA71_08855 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_08860 PF00809 Pterin binding enzyme KJA71_08870 PF17209 Hfq protein KJA71_08875 PF13167 GTP-binding GTPase N-terminal KJA71_08875 PF16360 GTP-binding GTPase Middle Region KJA71_08875 PF01926 50S ribosome-binding GTPase KJA71_08880 PF02464 Competence-damaged protein KJA71_08885 PF03109 ABC1 family KJA71_08890 PF00717 Peptidase S24-like KJA71_08890 PF01726 LexA DNA binding domain KJA71_08895 PF00154 recA bacterial DNA recombination protein KJA71_08900 PF02631 RecX family KJA71_08905 PF01411 tRNA synthetases class II (A) KJA71_08905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJA71_08905 PF02272 DHHA1 domain KJA71_08910 PF02599 Global regulator protein family KJA71_09100 PF05973 Phage derived protein Gp49-like (DUF891) KJA71_09170 PF03354 Phage Terminase KJA71_09180 PF00574 Clp protease KJA71_09265 PF13356 Arm DNA-binding domain KJA71_09265 PF00589 Phage integrase family KJA71_09270 PF08447 PAS fold KJA71_09270 PF13426 PAS domain KJA71_09270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_09275 PF17954 Quercetinase C-terminal cupin domain KJA71_09275 PF02678 Pirin KJA71_09280 PF03466 LysR substrate binding domain KJA71_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_09305 PF02581 Thiamine monophosphate synthase KJA71_09305 PF08543 Phosphomethylpyrimidine kinase KJA71_09320 PF13638 PIN domain KJA71_09320 PF02562 PhoH-like protein KJA71_09325 PF00578 AhpC/TSA family KJA71_09340 PF00701 Dihydrodipicolinate synthetase family KJA71_09350 PF00037 4Fe-4S binding domain KJA71_09350 PF11953 Domain of unknown function (DUF3470) KJA71_09355 PF05035 2-keto-3-deoxy-galactonokinase KJA71_09360 PF08450 SMP-30/Gluconolactonase/LRE-like region KJA71_09365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA71_09365 PF13378 Enolase C-terminal domain-like KJA71_09370 PF01081 KDPG and KHG aldolase KJA71_09375 PF03466 LysR substrate binding domain KJA71_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_09390 PF03442 Carbohydrate binding domain X2 KJA71_09390 PF00942 Cellulose binding domain KJA71_09405 PF01055 Glycosyl hydrolases family 31 KJA71_09405 PF17137 Domain of unknown function (DUF5110) KJA71_09405 PF16338 Domain of unknown function (DUF4968) KJA71_09415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KJA71_09415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KJA71_09425 PF00083 Sugar (and other) transporter KJA71_09445 PF01520 N-acetylmuramoyl-L-alanine amidase KJA71_09450 PF02649 Type I GTP cyclohydrolase folE2 KJA71_09460 PF12627 Probable RNA and SrmB- binding site of polymerase A KJA71_09460 PF12626 Polymerase A arginine-rich C-terminus KJA71_09460 PF01743 Poly A polymerase head domain KJA71_09465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KJA71_09470 PF02548 Ketopantoate hydroxymethyltransferase KJA71_09475 PF02569 Pantoate-beta-alanine ligase KJA71_09480 PF02261 Aspartate decarboxylase KJA71_09485 PF00342 Phosphoglucose isomerase KJA71_09505 PF01915 Glycosyl hydrolase family 3 C-terminal domain KJA71_09505 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_09505 PF14310 Fibronectin type III-like domain KJA71_09510 PF00474 Sodium:solute symporter family KJA71_09515 PF01590 GAF domain KJA71_09515 PF00990 Diguanylate cyclase, GGDEF domain KJA71_09515 PF00360 Phytochrome region KJA71_09515 PF00563 EAL domain KJA71_09525 PF02013 Cellulose or protein binding domain KJA71_09525 PF00150 Cellulase (glycosyl hydrolase family 5) KJA71_09530 PF00072 Response regulator receiver domain KJA71_09540 PF04551 GcpE protein KJA71_09545 PF01569 PAP2 superfamily KJA71_09555 PF07690 Major Facilitator Superfamily KJA71_09560 PF01177 Asp/Glu/Hydantoin racemase KJA71_09565 PF00892 EamA-like transporter family KJA71_09570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KJA71_09570 PF01565 FAD binding domain KJA71_09575 PF01180 Dihydroorotate dehydrogenase KJA71_09590 PF00171 Aldehyde dehydrogenase family KJA71_09605 PF00535 Glycosyl transferase family 2 KJA71_09610 PF01522 Polysaccharide deacetylase KJA71_09610 PF14883 Hypothetical glycosyl hydrolase family 13 KJA71_09620 PF08479 POTRA domain, ShlB-type KJA71_09620 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KJA71_09620 PF17287 POTRA domain KJA71_09625 PF05594 Haemagluttinin repeat KJA71_09625 PF13332 Hemagglutinin repeat KJA71_09625 PF04829 Pre-toxin domain with VENN motif KJA71_09635 PF13332 Hemagglutinin repeat KJA71_09635 PF04829 Pre-toxin domain with VENN motif KJA71_09635 PF05594 Haemagluttinin repeat KJA71_09650 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain KJA71_09650 PF13018 Extended Signal Peptide of Type V secretion system KJA71_09650 PF05594 Haemagluttinin repeat KJA71_09650 PF13332 Hemagglutinin repeat KJA71_09650 PF05860 haemagglutination activity domain KJA71_09660 PF00742 Homoserine dehydrogenase KJA71_09660 PF03447 Homoserine dehydrogenase, NAD binding domain KJA71_09660 PF01842 ACT domain KJA71_09660 PF13840 ACT domain KJA71_09660 PF00696 Amino acid kinase family KJA71_09665 PF08544 GHMP kinases C terminal KJA71_09665 PF00288 GHMP kinases N terminal domain KJA71_09675 PF14821 Threonine synthase N terminus KJA71_09675 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_09685 PF13545 Crp-like helix-turn-helix domain KJA71_09685 PF00027 Cyclic nucleotide-binding domain KJA71_09690 PF03129 Anticodon binding domain KJA71_09690 PF13393 Histidyl-tRNA synthetase KJA71_09700 PF08029 HisG, C-terminal domain KJA71_09700 PF01634 ATP phosphoribosyltransferase KJA71_09705 PF00815 Histidinol dehydrogenase KJA71_09710 PF00155 Aminotransferase class I and II KJA71_09715 PF00475 Imidazoleglycerol-phosphate dehydratase KJA71_09720 PF00117 Glutamine amidotransferase class-I KJA71_09725 PF00977 Histidine biosynthesis protein KJA71_09730 PF00977 Histidine biosynthesis protein KJA71_09735 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KJA71_09735 PF01502 Phosphoribosyl-AMP cyclohydrolase KJA71_09755 PF03079 ARD/ARD' family KJA71_09760 PF00596 Class II Aldolase and Adducin N-terminal domain KJA71_09765 PF13520 Amino acid permease KJA71_09770 PF13520 Amino acid permease KJA71_09780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA71_09780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA71_09780 PF01842 ACT domain KJA71_09785 PF01565 FAD binding domain KJA71_09785 PF02913 FAD linked oxidases, C-terminal domain KJA71_09805 PF01132 Elongation factor P (EF-P) OB domain KJA71_09805 PF08207 Elongation factor P (EF-P) KOW-like domain KJA71_09805 PF09285 Elongation factor P, C-terminal KJA71_09810 PF00106 short chain dehydrogenase KJA71_09815 PF00682 HMGL-like KJA71_09825 PF00378 Enoyl-CoA hydratase/isomerase KJA71_09835 PF07664 Ferrous iron transport protein B C terminus KJA71_09835 PF02421 Ferrous iron transport protein B KJA71_09835 PF07670 Nucleoside recognition KJA71_09850 PF00155 Aminotransferase class I and II KJA71_09855 PF03475 3-alpha domain KJA71_09855 PF03473 MOSC domain KJA71_09860 PF05173 Dihydrodipicolinate reductase, C-terminus KJA71_09860 PF01113 Dihydrodipicolinate reductase, N-terminus KJA71_09865 PF00117 Glutamine amidotransferase class-I KJA71_09865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KJA71_09875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA71_09875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KJA71_09875 PF02142 MGS-like domain KJA71_09880 PF01272 Transcription elongation factor, GreA/GreB, C-term KJA71_09880 PF03449 Transcription elongation factor, N-terminal KJA71_09890 PF01368 DHH family KJA71_09890 PF17768 RecJ OB domain KJA71_09890 PF02272 DHHA1 domain KJA71_09930 PF04397 LytTr DNA-binding domain KJA71_09930 PF00072 Response regulator receiver domain KJA71_09940 PF00152 tRNA synthetases class II (D, K and N) KJA71_09940 PF01336 OB-fold nucleic acid binding domain KJA71_09945 PF00072 Response regulator receiver domain KJA71_09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_09950 PF00512 His Kinase A (phospho-acceptor) domain KJA71_09950 PF01627 Hpt domain KJA71_09950 PF00072 Response regulator receiver domain KJA71_09955 PF00378 Enoyl-CoA hydratase/isomerase KJA71_09960 PF00501 AMP-binding enzyme KJA71_09960 PF13193 AMP-binding enzyme C-terminal domain KJA71_09970 PF00330 Aconitase family (aconitate hydratase) KJA71_09970 PF00694 Aconitase C-terminal domain KJA71_09985 PF00330 Aconitase family (aconitate hydratase) KJA71_09985 PF11791 Aconitate B N-terminal domain KJA71_09985 PF06434 Aconitate hydratase 2 N-terminus KJA71_09990 PF00561 alpha/beta hydrolase fold KJA71_09995 PF00990 Diguanylate cyclase, GGDEF domain KJA71_09995 PF00563 EAL domain KJA71_09995 PF03707 Bacterial signalling protein N terminal repeat KJA71_10000 PF01339 CheB methylesterase KJA71_10000 PF00072 Response regulator receiver domain KJA71_10005 PF03975 CheD chemotactic sensory transduction KJA71_10010 PF01739 CheR methyltransferase, SAM binding domain KJA71_10010 PF03705 CheR methyltransferase, all-alpha domain KJA71_10015 PF00672 HAMP domain KJA71_10015 PF02203 Tar ligand binding domain homologue KJA71_10015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10025 PF01584 CheW-like domain KJA71_10030 PF07317 Flagellar regulator YcgR KJA71_10030 PF07238 PilZ domain KJA71_10035 PF00672 HAMP domain KJA71_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10035 PF02203 Tar ligand binding domain homologue KJA71_10040 PF00672 HAMP domain KJA71_10040 PF02203 Tar ligand binding domain homologue KJA71_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10045 PF02203 Tar ligand binding domain homologue KJA71_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10045 PF00672 HAMP domain KJA71_10050 PF00672 HAMP domain KJA71_10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10050 PF02203 Tar ligand binding domain homologue KJA71_10055 PF02203 Tar ligand binding domain homologue KJA71_10055 PF00672 HAMP domain KJA71_10055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10060 PF02203 Tar ligand binding domain homologue KJA71_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10060 PF00672 HAMP domain KJA71_10065 PF02203 Tar ligand binding domain homologue KJA71_10065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10065 PF00672 HAMP domain KJA71_10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10070 PF02203 Tar ligand binding domain homologue KJA71_10070 PF00672 HAMP domain KJA71_10075 PF02203 Tar ligand binding domain homologue KJA71_10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10075 PF00672 HAMP domain KJA71_10085 PF02203 Tar ligand binding domain homologue KJA71_10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10085 PF00672 HAMP domain KJA71_10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10090 PF08269 Cache domain KJA71_10105 PF02895 Signal transducing histidine kinase, homodimeric domain KJA71_10105 PF09078 CheY binding KJA71_10105 PF01584 CheW-like domain KJA71_10105 PF01627 Hpt domain KJA71_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_10110 PF00072 Response regulator receiver domain KJA71_10120 PF01584 CheW-like domain KJA71_10125 PF13614 AAA domain KJA71_10130 PF00691 OmpA family KJA71_10130 PF13677 Membrane MotB of proton-channel complex MotA/MotB KJA71_10135 PF01618 MotA/TolQ/ExbB proton channel family KJA71_10150 PF00069 Protein kinase domain KJA71_10150 PF03793 PASTA domain KJA71_10215 PF04055 Radical SAM superfamily KJA71_10215 PF13186 Iron-sulfur cluster-binding domain KJA71_10230 PF02895 Signal transducing histidine kinase, homodimeric domain KJA71_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_10230 PF01627 Hpt domain KJA71_10230 PF00072 Response regulator receiver domain KJA71_10230 PF01584 CheW-like domain KJA71_10235 PF04344 Chemotaxis phosphatase, CheZ KJA71_10240 PF00072 Response regulator receiver domain KJA71_10245 PF04539 Sigma-70 region 3 KJA71_10245 PF04545 Sigma-70, region 4 KJA71_10245 PF04542 Sigma-70 region 2 KJA71_10250 PF10609 NUBPL iron-transfer P-loop NTPase KJA71_10255 PF00448 SRP54-type protein, GTPase domain KJA71_10260 PF00771 FHIPEP family KJA71_10265 PF01312 FlhB HrpN YscU SpaS Family KJA71_10270 PF03707 Bacterial signalling protein N terminal repeat KJA71_10270 PF00990 Diguanylate cyclase, GGDEF domain KJA71_10270 PF00563 EAL domain KJA71_10275 PF00990 Diguanylate cyclase, GGDEF domain KJA71_10280 PF00990 Diguanylate cyclase, GGDEF domain KJA71_10285 PF01311 Bacterial export proteins, family 1 KJA71_10290 PF01313 Bacterial export proteins, family 3 KJA71_10295 PF00813 FliP family KJA71_10300 PF04347 Flagellar biosynthesis protein, FliO KJA71_10305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KJA71_10310 PF02154 Flagellar motor switch protein FliM KJA71_10310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KJA71_10330 PF18269 T3SS EscN ATPase C-terminal domain KJA71_10330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA71_10340 PF14842 FliG N-terminal domain KJA71_10340 PF14841 FliG middle domain KJA71_10340 PF01706 FliG C-terminal domain KJA71_10345 PF01514 Secretory protein of YscJ/FliF family KJA71_10345 PF08345 Flagellar M-ring protein C-terminal KJA71_10350 PF02049 Flagellar hook-basal body complex protein FliE KJA71_10355 PF00535 Glycosyl transferase family 2 KJA71_10355 PF00534 Glycosyl transferases group 1 KJA71_10390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJA71_10390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KJA71_10400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KJA71_10405 PF00158 Sigma-54 interaction domain KJA71_10405 PF06490 Flagellar regulatory protein FleQ KJA71_10405 PF02954 Bacterial regulatory protein, Fis family KJA71_10410 PF01339 CheB methylesterase KJA71_10410 PF00072 Response regulator receiver domain KJA71_10415 PF00309 Sigma-54 factor, Activator interacting domain (AID) KJA71_10415 PF04963 Sigma-54 factor, core binding domain KJA71_10415 PF04552 Sigma-54, DNA binding domain KJA71_10420 PF00072 Response regulator receiver domain KJA71_10420 PF00196 Bacterial regulatory proteins, luxR family KJA71_10435 PF02561 Flagellar protein FliS KJA71_10440 PF07196 Flagellin hook IN motif KJA71_10440 PF07195 Flagellar hook-associated protein 2 C-terminus KJA71_10440 PF02465 Flagellar hook-associated protein 2 N-terminus KJA71_10450 PF00669 Bacterial flagellin N-terminal helical region KJA71_10450 PF00700 Bacterial flagellin C-terminal helical region KJA71_10455 PF00669 Bacterial flagellin N-terminal helical region KJA71_10455 PF00700 Bacterial flagellin C-terminal helical region KJA71_10460 PF07196 Flagellin hook IN motif KJA71_10460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KJA71_10465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KJA71_10465 PF10135 Rod binding protein KJA71_10470 PF02119 Flagellar P-ring protein KJA71_10475 PF02107 Flagellar L-ring protein KJA71_10480 PF00460 Flagella basal body rod protein KJA71_10480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KJA71_10485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KJA71_10485 PF00460 Flagella basal body rod protein KJA71_10490 PF00460 Flagella basal body rod protein KJA71_10490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KJA71_10490 PF07559 Flagellar basal body protein FlaE KJA71_10495 PF03963 Flagellar hook capping protein - N-terminal region KJA71_10500 PF00460 Flagella basal body rod protein KJA71_10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KJA71_10510 PF01584 CheW-like domain KJA71_10510 PF00072 Response regulator receiver domain KJA71_10530 PF13426 PAS domain KJA71_10530 PF13188 PAS domain KJA71_10530 PF00512 His Kinase A (phospho-acceptor) domain KJA71_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_10530 PF00989 PAS fold KJA71_10535 PF00563 EAL domain KJA71_10535 PF00990 Diguanylate cyclase, GGDEF domain KJA71_10535 PF03707 Bacterial signalling protein N terminal repeat KJA71_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_10540 PF07730 Histidine kinase KJA71_10545 PF03707 Bacterial signalling protein N terminal repeat KJA71_10545 PF00990 Diguanylate cyclase, GGDEF domain KJA71_10545 PF00563 EAL domain KJA71_10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_10555 PF00672 HAMP domain KJA71_10555 PF12729 Four helix bundle sensory module for signal transduction KJA71_10560 PF04356 Protein of unknown function (DUF489) KJA71_10570 PF00293 NUDIX domain KJA71_10575 PF02617 ATP-dependent Clp protease adaptor protein ClpS KJA71_10580 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_10580 PF07724 AAA domain (Cdc48 subfamily) KJA71_10580 PF17871 AAA lid domain KJA71_10580 PF02861 Clp amino terminal domain, pathogenicity island component KJA71_10580 PF10431 C-terminal, D2-small domain, of ClpB protein KJA71_10585 PF01176 Translation initiation factor 1A / IF-1 KJA71_10590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KJA71_10600 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_10605 PF17854 FtsK alpha domain KJA71_10605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KJA71_10605 PF01580 FtsK/SpoIIIE family KJA71_10605 PF09397 Ftsk gamma domain KJA71_10615 PF03548 Outer membrane lipoprotein carrier protein LolA KJA71_10625 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_10625 PF16193 AAA C-terminal domain KJA71_10625 PF12002 MgsA AAA+ ATPase C terminal KJA71_10630 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KJA71_10635 PF02803 Thiolase, C-terminal domain KJA71_10635 PF00108 Thiolase, N-terminal domain KJA71_10640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA71_10640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA71_10640 PF00378 Enoyl-CoA hydratase/isomerase KJA71_10650 PF00334 Nucleoside diphosphate kinase KJA71_10655 PF04055 Radical SAM superfamily KJA71_10665 PF13464 Domain of unknown function (DUF4115) KJA71_10675 PF13360 PQQ-like domain KJA71_10675 PF01011 PQQ enzyme repeat KJA71_10680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KJA71_10680 PF01926 50S ribosome-binding GTPase KJA71_10685 PF03453 MoeA N-terminal region (domain I and II) KJA71_10685 PF00994 Probable molybdopterin binding domain KJA71_10685 PF03454 MoeA C-terminal region (domain IV) KJA71_10690 PF00899 ThiF family KJA71_10715 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_10715 PF13823 Alcohol dehydrogenase GroES-associated KJA71_10715 PF00107 Zinc-binding dehydrogenase KJA71_10725 PF03372 Endonuclease/Exonuclease/phosphatase family KJA71_10735 PF03454 MoeA C-terminal region (domain IV) KJA71_10735 PF03453 MoeA N-terminal region (domain I and II) KJA71_10735 PF00994 Probable molybdopterin binding domain KJA71_10740 PF12804 MobA-like NTP transferase domain KJA71_10750 PF00561 alpha/beta hydrolase fold KJA71_10755 PF01566 Natural resistance-associated macrophage protein KJA71_10760 PF02742 Iron dependent repressor, metal binding and dimerisation domain KJA71_10760 PF01325 Iron dependent repressor, N-terminal DNA binding domain KJA71_10765 PF14437 MafB19-like deaminase KJA71_10770 PF00929 Exonuclease KJA71_10775 PF05552 Conserved TM helix KJA71_10775 PF00924 Mechanosensitive ion channel KJA71_10780 PF02896 PEP-utilising enzyme, TIM barrel domain KJA71_10780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KJA71_10780 PF00391 PEP-utilising enzyme, mobile domain KJA71_10785 PF03618 Kinase/pyrophosphorylase KJA71_10805 PF01066 CDP-alcohol phosphatidyltransferase KJA71_10815 PF00561 alpha/beta hydrolase fold KJA71_10830 PF01266 FAD dependent oxidoreductase KJA71_10830 PF00355 Rieske [2Fe-2S] domain KJA71_10840 PF16921 Tex protein YqgF-like domain KJA71_10840 PF00575 S1 RNA binding domain KJA71_10840 PF09371 Tex-like protein N-terminal domain KJA71_10840 PF17674 HHH domain KJA71_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_10845 PF00512 His Kinase A (phospho-acceptor) domain KJA71_10845 PF09308 LuxQ, periplasmic KJA71_10845 PF00072 Response regulator receiver domain KJA71_10885 PF00034 Cytochrome c KJA71_10895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_10900 PF00873 AcrB/AcrD/AcrF family KJA71_10905 PF00873 AcrB/AcrD/AcrF family KJA71_10910 PF01081 KDPG and KHG aldolase KJA71_10915 PF00920 Dehydratase family KJA71_10920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KJA71_10925 PF02685 Glucokinase KJA71_10930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KJA71_10930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KJA71_10935 PF17912 MalK OB fold domain KJA71_10935 PF00005 ABC transporter KJA71_10950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KJA71_10955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KJA71_10960 PF00890 FAD binding domain KJA71_10960 PF02910 Fumarate reductase flavoprotein C-term KJA71_10970 PF13085 2Fe-2S iron-sulfur cluster binding domain KJA71_10970 PF13237 4Fe-4S dicluster domain KJA71_10975 PF03937 Flavinator of succinate dehydrogenase KJA71_10985 PF12704 MacB-like periplasmic core domain KJA71_10985 PF02687 FtsX-like permease family KJA71_10990 PF00005 ABC transporter KJA71_11000 PF03772 Competence protein KJA71_11000 PF00753 Metallo-beta-lactamase superfamily KJA71_11005 PF01618 MotA/TolQ/ExbB proton channel family KJA71_11015 PF00664 ABC transporter transmembrane region KJA71_11015 PF00005 ABC transporter KJA71_11020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KJA71_11025 PF02348 Cytidylyltransferase KJA71_11030 PF01451 Low molecular weight phosphotyrosine protein phosphatase KJA71_11040 PF01541 GIY-YIG catalytic domain KJA71_11040 PF02151 UvrB/uvrC motif KJA71_11040 PF08459 UvrC Helix-hairpin-helix N-terminal KJA71_11045 PF01066 CDP-alcohol phosphatidyltransferase KJA71_11065 PF00501 AMP-binding enzyme KJA71_11065 PF13193 AMP-binding enzyme C-terminal domain KJA71_11065 PF00668 Condensation domain KJA71_11065 PF00550 Phosphopantetheine attachment site KJA71_11070 PF00668 Condensation domain KJA71_11070 PF00550 Phosphopantetheine attachment site KJA71_11070 PF13193 AMP-binding enzyme C-terminal domain KJA71_11070 PF00975 Thioesterase domain KJA71_11070 PF00501 AMP-binding enzyme KJA71_11075 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KJA71_11075 PF01648 4'-phosphopantetheinyl transferase superfamily KJA71_11085 PF00589 Phage integrase family KJA71_11095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KJA71_11095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KJA71_11095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KJA71_11105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA71_11115 PF17773 UPF0176 acylphosphatase like domain KJA71_11115 PF00581 Rhodanese-like domain KJA71_11120 PF00196 Bacterial regulatory proteins, luxR family KJA71_11120 PF00072 Response regulator receiver domain KJA71_11125 PF12111 Polyribonucleotide phosphorylase C terminal KJA71_11125 PF10150 Ribonuclease E/G family KJA71_11125 PF00575 S1 RNA binding domain KJA71_11130 PF00849 RNA pseudouridylate synthase KJA71_11130 PF01479 S4 domain KJA71_11135 PF11737 Protein of unknown function (DUF3300) KJA71_11140 PF02535 ZIP Zinc transporter KJA71_11150 PF01329 Pterin 4 alpha carbinolamine dehydratase KJA71_11155 PF01106 NifU-like domain KJA71_11210 PF00106 short chain dehydrogenase KJA71_11230 PF02303 Helix-destabilising protein KJA71_11300 PF02303 Helix-destabilising protein KJA71_11325 PF01494 FAD binding domain KJA71_11330 PF09335 SNARE associated Golgi protein KJA71_11345 PF07995 Glucose / Sorbosone dehydrogenase KJA71_11355 PF00144 Beta-lactamase KJA71_11365 PF00072 Response regulator receiver domain KJA71_11365 PF04397 LytTr DNA-binding domain KJA71_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_11370 PF06580 Histidine kinase KJA71_11370 PF07694 5TMR of 5TMR-LYT KJA71_11380 PF00082 Subtilase family KJA71_11380 PF03797 Autotransporter beta-domain KJA71_11385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_11390 PF00873 AcrB/AcrD/AcrF family KJA71_11400 PF00072 Response regulator receiver domain KJA71_11400 PF00512 His Kinase A (phospho-acceptor) domain KJA71_11400 PF13426 PAS domain KJA71_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_11400 PF08448 PAS fold KJA71_11405 PF00072 Response regulator receiver domain KJA71_11405 PF00196 Bacterial regulatory proteins, luxR family KJA71_11410 PF12951 Passenger-associated-transport-repeat KJA71_11410 PF12951 Passenger-associated-transport-repeat KJA71_11415 PF08447 PAS fold KJA71_11415 PF00990 Diguanylate cyclase, GGDEF domain KJA71_11415 PF08448 PAS fold KJA71_11415 PF00563 EAL domain KJA71_11435 PF05974 Domain of unknown function (DUF892) KJA71_11460 PF10414 Sirohaem synthase dimerisation region KJA71_11460 PF14824 Sirohaem biosynthesis protein central KJA71_11460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJA71_11475 PF05977 Transmembrane secretion effector KJA71_11490 PF00857 Isochorismatase family KJA71_11510 PF00072 Response regulator receiver domain KJA71_11510 PF00196 Bacterial regulatory proteins, luxR family KJA71_11530 PF03466 LysR substrate binding domain KJA71_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_11535 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KJA71_11535 PF00361 Proton-conducting membrane transporter KJA71_11535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJA71_11540 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KJA71_11550 PF01381 Helix-turn-helix KJA71_11555 PF05284 Protein of unknown function (DUF736) KJA71_11565 PF04002 RadC-like JAB domain KJA71_11590 PF13356 Arm DNA-binding domain KJA71_11590 PF00589 Phage integrase family KJA71_11605 PF00593 TonB dependent receptor KJA71_11605 PF07715 TonB-dependent Receptor Plug Domain KJA71_11625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KJA71_11650 PF07715 TonB-dependent Receptor Plug Domain KJA71_11650 PF00593 TonB dependent receptor KJA71_11660 PF10947 Protein of unknown function (DUF2628) KJA71_11690 PF00664 ABC transporter transmembrane region KJA71_11690 PF00005 ABC transporter KJA71_11690 PF03412 Peptidase C39 family KJA71_11700 PF13614 AAA domain KJA71_11740 PF01751 Toprim domain KJA71_11740 PF01131 DNA topoisomerase KJA71_11745 PF00145 C-5 cytosine-specific DNA methylase KJA71_11805 PF00892 EamA-like transporter family KJA71_11810 PF00892 EamA-like transporter family KJA71_11820 PF02525 Flavodoxin-like fold KJA71_11825 PF02798 Glutathione S-transferase, N-terminal domain KJA71_11825 PF00043 Glutathione S-transferase, C-terminal domain KJA71_11830 PF05544 Proline racemase KJA71_11835 PF03358 NADPH-dependent FMN reductase KJA71_11845 PF07690 Major Facilitator Superfamily KJA71_11850 PF02311 AraC-like ligand binding domain KJA71_11850 PF12833 Helix-turn-helix domain KJA71_11990 PF13361 UvrD-like helicase C-terminal domain KJA71_11990 PF00580 UvrD/REP helicase N-terminal domain KJA71_11990 PF12462 DNA helicase IV / RNA helicase N terminal KJA71_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_12065 PF03466 LysR substrate binding domain KJA71_12070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA71_12070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA71_12075 PF03401 Tripartite tricarboxylate transporter family receptor KJA71_12090 PF04002 RadC-like JAB domain KJA71_12125 PF00589 Phage integrase family KJA71_12125 PF13356 Arm DNA-binding domain KJA71_12130 PF00117 Glutamine amidotransferase class-I KJA71_12130 PF00958 GMP synthase C terminal domain KJA71_12130 PF02540 NAD synthase KJA71_12135 PF00571 CBS domain KJA71_12135 PF00478 IMP dehydrogenase / GMP reductase domain KJA71_12140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KJA71_12140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KJA71_12150 PF02254 TrkA-N domain KJA71_12150 PF00999 Sodium/hydrogen exchanger family KJA71_12155 PF00483 Nucleotidyl transferase KJA71_12160 PF02719 Polysaccharide biosynthesis protein KJA71_12165 PF00953 Glycosyl transferase family 4 KJA71_12170 PF18073 Rubredoxin metal binding domain KJA71_12180 PF00216 Bacterial DNA-binding protein KJA71_12185 PF00575 S1 RNA binding domain KJA71_12190 PF02224 Cytidylate kinase KJA71_12195 PF00444 Ribosomal protein L36 KJA71_12205 PF04371 Porphyromonas-type peptidyl-arginine deiminase KJA71_12210 PF00795 Carbon-nitrogen hydrolase KJA71_12235 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_12240 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_12260 PF00356 Bacterial regulatory proteins, lacI family KJA71_12270 PF03795 YCII-related domain KJA71_12275 PF02616 Segregation and condensation protein ScpA KJA71_12280 PF04079 Segregation and condensation complex subunit ScpB KJA71_12285 PF00849 RNA pseudouridylate synthase KJA71_12285 PF01479 S4 domain KJA71_12300 PF00795 Carbon-nitrogen hydrolase KJA71_12305 PF00155 Aminotransferase class I and II KJA71_12310 PF00005 ABC transporter KJA71_12315 PF03379 CcmB protein KJA71_12320 PF01578 Cytochrome C assembly protein KJA71_12330 PF03100 CcmE KJA71_12335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KJA71_12335 PF01578 Cytochrome C assembly protein KJA71_12340 PF08534 Redoxin KJA71_12345 PF03918 Cytochrome C biogenesis protein KJA71_12355 PF00561 alpha/beta hydrolase fold KJA71_12360 PF00313 'Cold-shock' DNA-binding domain KJA71_12365 PF00664 ABC transporter transmembrane region KJA71_12365 PF00005 ABC transporter KJA71_12370 PF00664 ABC transporter transmembrane region KJA71_12370 PF00005 ABC transporter KJA71_12375 PF01654 Cytochrome bd terminal oxidase subunit I KJA71_12380 PF02322 Cytochrome bd terminal oxidase subunit II KJA71_12400 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KJA71_12400 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KJA71_12405 PF00171 Aldehyde dehydrogenase family KJA71_12410 PF00696 Amino acid kinase family KJA71_12410 PF01472 PUA domain KJA71_12420 PF00206 Lyase KJA71_12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain KJA71_12435 PF00696 Amino acid kinase family KJA71_12435 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KJA71_12440 PF07687 Peptidase dimerisation domain KJA71_12440 PF01546 Peptidase family M20/M25/M40 KJA71_12450 PF00764 Arginosuccinate synthase KJA71_12455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJA71_12455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJA71_12465 PF09190 DALR domain KJA71_12465 PF01406 tRNA synthetases class I (C) catalytic domain KJA71_12470 PF02657 Fe-S metabolism associated domain KJA71_12480 PF01258 Prokaryotic dksA/traR C4-type zinc finger KJA71_12485 PF01809 Putative membrane protein insertion efficiency factor KJA71_12490 PF01979 Amidohydrolase family KJA71_12495 PF01551 Peptidase family M23 KJA71_12495 PF08460 Bacterial SH3 domain KJA71_12515 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KJA71_12520 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KJA71_12530 PF00753 Metallo-beta-lactamase superfamily KJA71_12560 PF00295 Glycosyl hydrolases family 28 KJA71_12570 PF13419 Haloacid dehalogenase-like hydrolase KJA71_12580 PF01979 Amidohydrolase family KJA71_12590 PF01132 Elongation factor P (EF-P) OB domain KJA71_12590 PF08207 Elongation factor P (EF-P) KOW-like domain KJA71_12590 PF09285 Elongation factor P, C-terminal KJA71_12595 PF04055 Radical SAM superfamily KJA71_12600 PF00990 Diguanylate cyclase, GGDEF domain KJA71_12600 PF00563 EAL domain KJA71_12600 PF03707 Bacterial signalling protein N terminal repeat KJA71_12600 PF13188 PAS domain KJA71_12610 PF00588 SpoU rRNA Methylase family KJA71_12615 PF00459 Inositol monophosphatase family KJA71_12620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KJA71_12620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KJA71_12625 PF00545 ribonuclease KJA71_12635 PF16326 ABC transporter C-terminal domain KJA71_12635 PF12848 ABC transporter KJA71_12635 PF00005 ABC transporter KJA71_12640 PF00270 DEAD/DEAH box helicase KJA71_12640 PF03880 DbpA RNA binding domain KJA71_12640 PF00271 Helicase conserved C-terminal domain KJA71_12645 PF00156 Phosphoribosyl transferase domain KJA71_12650 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KJA71_12655 PF00135 Carboxylesterase family KJA71_12660 PF14497 Glutathione S-transferase, C-terminal domain KJA71_12660 PF02798 Glutathione S-transferase, N-terminal domain KJA71_12665 PF00313 'Cold-shock' DNA-binding domain KJA71_12670 PF07152 YaeQ protein KJA71_12680 PF00563 EAL domain KJA71_12680 PF00990 Diguanylate cyclase, GGDEF domain KJA71_12680 PF00072 Response regulator receiver domain KJA71_12685 PF01435 Peptidase family M48 KJA71_12690 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA71_12695 PF00106 short chain dehydrogenase KJA71_12700 PF05233 PHB accumulation regulatory domain KJA71_12700 PF07879 PHB/PHA accumulation regulator DNA-binding domain KJA71_12720 PF01119 DNA mismatch repair protein, C-terminal domain KJA71_12720 PF08676 MutL C terminal dimerisation domain KJA71_12725 PF11741 AMIN domain KJA71_12725 PF01520 N-acetylmuramoyl-L-alanine amidase KJA71_12730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KJA71_12735 PF03853 YjeF-related protein N-terminus KJA71_12735 PF01256 Carbohydrate kinase KJA71_12740 PF08331 Domain of unknown function (DUF1730) KJA71_12745 PF02601 Exonuclease VII, large subunit KJA71_12745 PF13742 OB-fold nucleic acid binding domain KJA71_12755 PF03781 Sulfatase-modifying factor enzyme 1 KJA71_12765 PF01612 3'-5' exonuclease KJA71_12765 PF00570 HRDC domain KJA71_12770 PF13298 DNA polymerase Ligase (LigD) KJA71_12770 PF01068 ATP dependent DNA ligase domain KJA71_12770 PF04679 ATP dependent DNA ligase C terminal region KJA71_12790 PF00589 Phage integrase family KJA71_12835 PF00171 Aldehyde dehydrogenase family KJA71_12835 PF01619 Proline dehydrogenase KJA71_12835 PF14850 DNA-binding domain of Proline dehydrogenase KJA71_12835 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KJA71_12850 PF00239 Resolvase, N terminal domain KJA71_12850 PF02796 Helix-turn-helix domain of resolvase KJA71_12865 PF02384 N-6 DNA Methylase KJA71_12870 PF09572 XamI restriction endonuclease KJA71_12930 PF01584 CheW-like domain KJA71_12935 PF00672 HAMP domain KJA71_12935 PF02743 Cache domain KJA71_12935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_12940 PF02245 Methylpurine-DNA glycosylase (MPG) KJA71_12945 PF00271 Helicase conserved C-terminal domain KJA71_12945 PF08494 DEAD/H associated KJA71_12945 PF00270 DEAD/DEAH box helicase KJA71_12965 PF04386 Stringent starvation protein B KJA71_12970 PF02798 Glutathione S-transferase, N-terminal domain KJA71_12970 PF00043 Glutathione S-transferase, C-terminal domain KJA71_12975 PF02167 Cytochrome C1 family KJA71_12980 PF00033 Cytochrome b/b6/petB KJA71_12980 PF00032 Cytochrome b(C-terminal)/b6/petD KJA71_12985 PF00355 Rieske [2Fe-2S] domain KJA71_12985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KJA71_12990 PF01464 Transglycosylase SLT domain KJA71_13005 PF00919 Uncharacterized protein family UPF0004 KJA71_13005 PF04055 Radical SAM superfamily KJA71_13005 PF01938 TRAM domain KJA71_13010 PF02562 PhoH-like protein KJA71_13020 PF02130 Uncharacterized protein family UPF0054 KJA71_13030 PF03471 Transporter associated domain KJA71_13030 PF00571 CBS domain KJA71_13045 PF00171 Aldehyde dehydrogenase family KJA71_13050 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_13055 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_13060 PF08402 TOBE domain KJA71_13060 PF00005 ABC transporter KJA71_13065 PF02321 Outer membrane efflux protein KJA71_13070 PF07690 Major Facilitator Superfamily KJA71_13075 PF13533 Biotin-lipoyl like KJA71_13080 PF13416 Bacterial extracellular solute-binding protein KJA71_13085 PF00202 Aminotransferase class-III KJA71_13090 PF00120 Glutamine synthetase, catalytic domain KJA71_13095 PF07722 Peptidase C26 KJA71_13100 PF00120 Glutamine synthetase, catalytic domain KJA71_13105 PF01266 FAD dependent oxidoreductase KJA71_13110 PF00072 Response regulator receiver domain KJA71_13110 PF00990 Diguanylate cyclase, GGDEF domain KJA71_13115 PF01814 Hemerythrin HHE cation binding domain KJA71_13120 PF00083 Sugar (and other) transporter KJA71_13120 PF07690 Major Facilitator Superfamily KJA71_13130 PF00384 Molybdopterin oxidoreductase KJA71_13135 PF02634 FdhD/NarQ family KJA71_13140 PF07690 Major Facilitator Superfamily KJA71_13145 PF00202 Aminotransferase class-III KJA71_13155 PF04286 Protein of unknown function (DUF445) KJA71_13160 PF01627 Hpt domain KJA71_13160 PF00512 His Kinase A (phospho-acceptor) domain KJA71_13160 PF00072 Response regulator receiver domain KJA71_13160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA71_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_13160 PF00672 HAMP domain KJA71_13165 PF00072 Response regulator receiver domain KJA71_13170 PF07690 Major Facilitator Superfamily KJA71_13180 PF05088 Bacterial NAD-glutamate dehydrogenase KJA71_13190 PF00529 HlyD membrane-fusion protein of T1SS KJA71_13190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_13195 PF00873 AcrB/AcrD/AcrF family KJA71_13200 PF00356 Bacterial regulatory proteins, lacI family KJA71_13205 PF05524 PEP-utilising enzyme, N-terminal KJA71_13205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KJA71_13205 PF00381 PTS HPr component phosphorylation site KJA71_13205 PF02896 PEP-utilising enzyme, TIM barrel domain KJA71_13205 PF00391 PEP-utilising enzyme, mobile domain KJA71_13210 PF00294 pfkB family carbohydrate kinase KJA71_13215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KJA71_13260 PF07549 SecD/SecF GG Motif KJA71_13260 PF02355 Protein export membrane protein KJA71_13265 PF07549 SecD/SecF GG Motif KJA71_13265 PF13721 SecD export protein N-terminal TM region KJA71_13265 PF02355 Protein export membrane protein KJA71_13270 PF02699 Preprotein translocase subunit KJA71_13275 PF01702 Queuine tRNA-ribosyltransferase KJA71_13280 PF02547 Queuosine biosynthesis protein KJA71_13320 PF00759 Glycosyl hydrolase family 9 KJA71_13320 PF02927 Cellulase N-terminal ig-like domain KJA71_13330 PF00037 4Fe-4S binding domain KJA71_13340 PF01467 Cytidylyltransferase-like KJA71_13350 PF00183 Hsp90 protein KJA71_13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_13370 PF00593 TonB dependent receptor KJA71_13370 PF07715 TonB-dependent Receptor Plug Domain KJA71_13380 PF04616 Glycosyl hydrolases family 43 KJA71_13385 PF07532 Bacterial Ig-like domain (group 4) KJA71_13390 PF00593 TonB dependent receptor KJA71_13390 PF07715 TonB-dependent Receptor Plug Domain KJA71_13400 PF09286 Pro-kumamolisin, activation domain KJA71_13400 PF00082 Subtilase family KJA71_13425 PF13520 Amino acid permease KJA71_13440 PF01321 Creatinase/Prolidase N-terminal domain KJA71_13440 PF00557 Metallopeptidase family M24 KJA71_13445 PF00171 Aldehyde dehydrogenase family KJA71_13450 PF00701 Dihydrodipicolinate synthetase family KJA71_13455 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_13455 PF04324 BFD-like [2Fe-2S] binding domain KJA71_13465 PF01266 FAD dependent oxidoreductase KJA71_13470 PF05544 Proline racemase KJA71_13480 PF02881 SRP54-type protein, helical bundle domain KJA71_13480 PF00448 SRP54-type protein, GTPase domain KJA71_13485 PF10576 Iron-sulfur binding domain of endonuclease III KJA71_13485 PF00633 Helix-hairpin-helix motif KJA71_13485 PF00730 HhH-GPD superfamily base excision DNA repair protein KJA71_13485 PF14815 NUDIX domain KJA71_13490 PF04362 Bacterial Fe(2+) trafficking KJA71_13495 PF00072 Response regulator receiver domain KJA71_13495 PF13426 PAS domain KJA71_13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_13525 PF08212 Lipocalin-like domain KJA71_13540 PF12806 Acetyl-CoA dehydrogenase C-terminal like KJA71_13540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_13540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_13540 PF02770 Acyl-CoA dehydrogenase, middle domain KJA71_13550 PF02780 Transketolase, C-terminal domain KJA71_13550 PF02779 Transketolase, pyrimidine binding domain KJA71_13550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KJA71_13570 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KJA71_13575 PF16123 Hydroxyacylglutathione hydrolase C-terminus KJA71_13575 PF00753 Metallo-beta-lactamase superfamily KJA71_13580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJA71_13580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KJA71_13595 PF03808 Glycosyl transferase WecB/TagA/CpsF family KJA71_13610 PF14667 Polysaccharide biosynthesis C-terminal domain KJA71_13620 PF13439 Glycosyltransferase Family 4 KJA71_13620 PF00534 Glycosyl transferases group 1 KJA71_13640 PF02397 Bacterial sugar transferase KJA71_13665 PF13411 MerR HTH family regulatory protein KJA71_13670 PF00216 Bacterial DNA-binding protein KJA71_13675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KJA71_13675 PF01588 Putative tRNA binding domain KJA71_13675 PF03147 Ferredoxin-fold anticodon binding domain KJA71_13675 PF03484 tRNA synthetase B5 domain KJA71_13675 PF03483 B3/4 domain KJA71_13680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KJA71_13680 PF01409 tRNA synthetases class II core domain (F) KJA71_13685 PF00453 Ribosomal protein L20 KJA71_13690 PF01632 Ribosomal protein L35 KJA71_13695 PF00707 Translation initiation factor IF-3, C-terminal domain KJA71_13695 PF05198 Translation initiation factor IF-3, N-terminal domain KJA71_13700 PF03129 Anticodon binding domain KJA71_13700 PF02824 TGS domain KJA71_13700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA71_13700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJA71_13705 PF00356 Bacterial regulatory proteins, lacI family KJA71_13710 PF00128 Alpha amylase, catalytic domain KJA71_13710 PF00686 Starch binding domain KJA71_13715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KJA71_13725 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KJA71_13725 PF10566 Glycoside hydrolase 97 KJA71_13725 PF14508 Glycosyl-hydrolase 97 N-terminal KJA71_13740 PF00128 Alpha amylase, catalytic domain KJA71_13790 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KJA71_13795 PF05101 Type IV secretory pathway, VirB3-like protein KJA71_13805 PF01464 Transglycosylase SLT domain KJA71_13810 PF00437 Type II/IV secretion system protein KJA71_13815 PF03743 Bacterial conjugation TrbI-like protein KJA71_13835 PF02534 Type IV secretory system Conjugative DNA transfer KJA71_13850 PF04851 Type III restriction enzyme, res subunit KJA71_13850 PF00271 Helicase conserved C-terminal domain KJA71_13850 PF17757 UvrB interaction domain KJA71_13850 PF12344 Ultra-violet resistance protein B KJA71_13850 PF02151 UvrB/uvrC motif KJA71_13920 PF01555 DNA methylase KJA71_13975 PF00182 Chitinase class I KJA71_14035 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KJA71_14035 PF07963 Prokaryotic N-terminal methylation motif KJA71_14040 PF05567 Neisseria PilC beta-propeller domain KJA71_14065 PF06580 Histidine kinase KJA71_14065 PF07694 5TMR of 5TMR-LYT KJA71_14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_14070 PF11892 Domain of unknown function (DUF3412) KJA71_14070 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KJA71_14070 PF03641 Possible lysine decarboxylase KJA71_14075 PF00593 TonB dependent receptor KJA71_14080 PF01914 MarC family integral membrane protein KJA71_14090 PF00462 Glutaredoxin KJA71_14095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KJA71_14095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KJA71_14100 PF02222 ATP-grasp domain KJA71_14100 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KJA71_14105 PF00731 AIR carboxylase KJA71_14115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KJA71_14115 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KJA71_14125 PF03725 3' exoribonuclease family, domain 2 KJA71_14125 PF01138 3' exoribonuclease family, domain 1 KJA71_14125 PF00013 KH domain KJA71_14125 PF00575 S1 RNA binding domain KJA71_14125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KJA71_14130 PF00312 Ribosomal protein S15 KJA71_14135 PF09157 Pseudouridine synthase II TruB, C-terminal KJA71_14135 PF16198 tRNA pseudouridylate synthase B C-terminal domain KJA71_14135 PF01509 TruB family pseudouridylate synthase (N terminal domain) KJA71_14140 PF02033 Ribosome-binding factor A KJA71_14145 PF00009 Elongation factor Tu GTP binding domain KJA71_14145 PF04760 Translation initiation factor IF-2, N-terminal region KJA71_14145 PF11987 Translation-initiation factor 2 KJA71_14145 PF08364 Bacterial translation initiation factor IF-2 associated region KJA71_14150 PF08529 NusA N-terminal domain KJA71_14150 PF13184 NusA-like KH domain KJA71_14150 PF00575 S1 RNA binding domain KJA71_14155 PF02576 RimP N-terminal domain KJA71_14155 PF17384 RimP C-terminal SH3 domain KJA71_14165 PF00361 Proton-conducting membrane transporter KJA71_14170 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KJA71_14170 PF00361 Proton-conducting membrane transporter KJA71_14175 PF00361 Proton-conducting membrane transporter KJA71_14175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJA71_14180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KJA71_14185 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KJA71_14190 PF12838 4Fe-4S dicluster domain KJA71_14195 PF00146 NADH dehydrogenase KJA71_14200 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KJA71_14200 PF00384 Molybdopterin oxidoreductase KJA71_14200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KJA71_14205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KJA71_14205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KJA71_14205 PF10531 SLBB domain KJA71_14215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KJA71_14220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KJA71_14225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KJA71_14230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KJA71_14245 PF00121 Triosephosphate isomerase KJA71_14250 PF00106 short chain dehydrogenase KJA71_14265 PF00563 EAL domain KJA71_14265 PF03707 Bacterial signalling protein N terminal repeat KJA71_14265 PF00990 Diguanylate cyclase, GGDEF domain KJA71_14280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA71_14280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA71_14280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA71_14280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA71_14285 PF01039 Carboxyl transferase domain KJA71_14285 PF17848 Acetyl-coA carboxylase zinc finger domain KJA71_14290 PF00290 Tryptophan synthase alpha chain KJA71_14300 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_14305 PF03466 LysR substrate binding domain KJA71_14310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KJA71_14315 PF01416 tRNA pseudouridine synthase KJA71_14335 PF01118 Semialdehyde dehydrogenase, NAD binding domain KJA71_14335 PF02774 Semialdehyde dehydrogenase, dimerisation domain KJA71_14340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA71_14340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA71_14345 PF01264 Chorismate synthase KJA71_14350 PF05175 Methyltransferase small domain KJA71_14355 PF02630 SCO1/SenC KJA71_14360 PF02666 Phosphatidylserine decarboxylase KJA71_14370 PF05872 Bacterial protein of unknown function (DUF853) KJA71_14375 PF00293 NUDIX domain KJA71_14390 PF01272 Transcription elongation factor, GreA/GreB, C-term KJA71_14390 PF03449 Transcription elongation factor, N-terminal KJA71_14395 PF00919 Uncharacterized protein family UPF0004 KJA71_14395 PF18693 TRAM domain KJA71_14395 PF04055 Radical SAM superfamily KJA71_14400 PF01738 Dienelactone hydrolase family KJA71_14420 PF00692 dUTPase KJA71_14425 PF10609 NUBPL iron-transfer P-loop NTPase KJA71_14430 PF07715 TonB-dependent Receptor Plug Domain KJA71_14430 PF00593 TonB dependent receptor KJA71_14445 PF05649 Peptidase family M13 KJA71_14445 PF01431 Peptidase family M13 KJA71_14450 PF05649 Peptidase family M13 KJA71_14450 PF01431 Peptidase family M13 KJA71_14465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJA71_14470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA71_14470 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_14475 PF01266 FAD dependent oxidoreductase KJA71_14480 PF04235 Protein of unknown function (DUF418) KJA71_14485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA71_14490 PF00877 NlpC/P60 family KJA71_14495 PF00877 NlpC/P60 family KJA71_14510 PF00375 Sodium:dicarboxylate symporter family KJA71_14515 PF00245 Alkaline phosphatase KJA71_14520 PF01171 PP-loop family KJA71_14520 PF11734 TilS substrate C-terminal domain KJA71_14520 PF09179 TilS substrate binding domain KJA71_14525 PF02609 Exonuclease VII small subunit KJA71_14530 PF00348 Polyprenyl synthetase KJA71_14535 PF14521 Lysine-specific metallo-endopeptidase KJA71_14545 PF01523 Putative modulator of DNA gyrase KJA71_14550 PF04751 Protein of unknown function (DUF615) KJA71_14555 PF01523 Putative modulator of DNA gyrase KJA71_14565 PF13502 AsmA-like C-terminal region KJA71_14565 PF13116 Protein of unknown function KJA71_14570 PF10150 Ribonuclease E/G family KJA71_14570 PF00575 S1 RNA binding domain KJA71_14575 PF02545 Maf-like protein KJA71_14580 PF04402 Protein of unknown function (DUF541) KJA71_14595 PF02590 Predicted SPOUT methyltransferase KJA71_14610 PF01467 Cytidylyltransferase-like KJA71_14625 PF08264 Anticodon-binding domain of tRNA KJA71_14625 PF00133 tRNA synthetases class I (I, L, M and V) KJA71_14625 PF13603 Leucyl-tRNA synthetase, Domain 2 KJA71_14635 PF00085 Thioredoxin KJA71_14660 PF04070 Domain of unknown function (DUF378) KJA71_14665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KJA71_14675 PF03466 LysR substrate binding domain KJA71_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_14705 PF00664 ABC transporter transmembrane region KJA71_14705 PF00005 ABC transporter KJA71_14720 PF00873 AcrB/AcrD/AcrF family KJA71_14735 PF02321 Outer membrane efflux protein KJA71_14740 PF00072 Response regulator receiver domain KJA71_14740 PF00486 Transcriptional regulatory protein, C terminal KJA71_14745 PF00672 HAMP domain KJA71_14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_14745 PF00512 His Kinase A (phospho-acceptor) domain KJA71_14750 PF00999 Sodium/hydrogen exchanger family KJA71_14755 PF00144 Beta-lactamase KJA71_14760 PF03737 Aldolase/RraA KJA71_14775 PF00990 Diguanylate cyclase, GGDEF domain KJA71_14780 PF01479 S4 domain KJA71_14780 PF00849 RNA pseudouridylate synthase KJA71_14785 PF08448 PAS fold KJA71_14785 PF00563 EAL domain KJA71_14785 PF00990 Diguanylate cyclase, GGDEF domain KJA71_14790 PF00271 Helicase conserved C-terminal domain KJA71_14790 PF00270 DEAD/DEAH box helicase KJA71_14790 PF03880 DbpA RNA binding domain KJA71_14840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KJA71_14840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJA71_14850 PF00654 Voltage gated chloride channel KJA71_14855 PF00107 Zinc-binding dehydrogenase KJA71_14855 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_14875 PF00593 TonB dependent receptor KJA71_14875 PF07715 TonB-dependent Receptor Plug Domain KJA71_14885 PF01483 Proprotein convertase P-domain KJA71_14885 PF00082 Subtilase family KJA71_14895 PF01483 Proprotein convertase P-domain KJA71_14895 PF00082 Subtilase family KJA71_14905 PF00248 Aldo/keto reductase family KJA71_14915 PF07690 Major Facilitator Superfamily KJA71_14920 PF03466 LysR substrate binding domain KJA71_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_14930 PF12833 Helix-turn-helix domain KJA71_14930 PF06719 AraC-type transcriptional regulator N-terminus KJA71_14940 PF00440 Bacterial regulatory proteins, tetR family KJA71_14940 PF16859 Tetracyclin repressor-like, C-terminal domain KJA71_14945 PF02321 Outer membrane efflux protein KJA71_14950 PF00873 AcrB/AcrD/AcrF family KJA71_14955 PF00529 HlyD membrane-fusion protein of T1SS KJA71_14955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_14965 PF01475 Ferric uptake regulator family KJA71_14970 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA71_14995 PF06123 Inner membrane protein CreD KJA71_15010 PF00672 HAMP domain KJA71_15010 PF00512 His Kinase A (phospho-acceptor) domain KJA71_15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_15015 PF00072 Response regulator receiver domain KJA71_15015 PF00486 Transcriptional regulatory protein, C terminal KJA71_15020 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KJA71_15030 PF03461 TRCF domain KJA71_15030 PF17757 UvrB interaction domain KJA71_15030 PF00271 Helicase conserved C-terminal domain KJA71_15030 PF00270 DEAD/DEAH box helicase KJA71_15030 PF02559 CarD-like/TRCF domain KJA71_15060 PF01584 CheW-like domain KJA71_15060 PF09078 CheY binding KJA71_15060 PF02895 Signal transducing histidine kinase, homodimeric domain KJA71_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_15060 PF01627 Hpt domain KJA71_15065 PF00672 HAMP domain KJA71_15065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_15065 PF02203 Tar ligand binding domain homologue KJA71_15070 PF01584 CheW-like domain KJA71_15075 PF00563 EAL domain KJA71_15075 PF00990 Diguanylate cyclase, GGDEF domain KJA71_15075 PF13426 PAS domain KJA71_15080 PF01739 CheR methyltransferase, SAM binding domain KJA71_15080 PF03705 CheR methyltransferase, all-alpha domain KJA71_15085 PF01339 CheB methylesterase KJA71_15085 PF00072 Response regulator receiver domain KJA71_15090 PF13091 PLD-like domain KJA71_15095 PF01431 Peptidase family M13 KJA71_15095 PF05649 Peptidase family M13 KJA71_15105 PF00300 Histidine phosphatase superfamily (branch 1) KJA71_15110 PF04493 Endonuclease V KJA71_15120 PF02678 Pirin KJA71_15120 PF05726 Pirin C-terminal cupin domain KJA71_15135 PF02678 Pirin KJA71_15135 PF05726 Pirin C-terminal cupin domain KJA71_15140 PF02554 Carbon starvation protein CstA KJA71_15140 PF13722 5TM C-terminal transporter carbon starvation CstA KJA71_15145 PF04328 Selenoprotein, putative KJA71_15185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KJA71_15185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KJA71_15190 PF03450 CO dehydrogenase flavoprotein C-terminal domain KJA71_15190 PF00941 FAD binding domain in molybdopterin dehydrogenase KJA71_15195 PF10518 TAT (twin-arginine translocation) pathway signal sequence KJA71_15195 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_15195 PF01799 [2Fe-2S] binding domain KJA71_15200 PF08659 KR domain KJA71_15200 PF00550 Phosphopantetheine attachment site KJA71_15200 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_15200 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_15200 PF16197 Ketoacyl-synthetase C-terminal extension KJA71_15200 PF09277 Erythronolide synthase, docking KJA71_15200 PF08990 Erythronolide synthase docking KJA71_15200 PF00698 Acyl transferase domain KJA71_15200 PF14765 Polyketide synthase dehydratase KJA71_15200 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_15205 PF00360 Phytochrome region KJA71_15205 PF00990 Diguanylate cyclase, GGDEF domain KJA71_15205 PF00563 EAL domain KJA71_15205 PF01590 GAF domain KJA71_15210 PF00436 Single-strand binding protein family KJA71_15215 PF00348 Polyprenyl synthetase KJA71_15225 PF08245 Mur ligase middle domain KJA71_15225 PF02875 Mur ligase family, glutamate ligase domain KJA71_15240 PF00696 Amino acid kinase family KJA71_15240 PF01842 ACT domain KJA71_15245 PF02567 Phenazine biosynthesis-like protein KJA71_15250 PF02567 Phenazine biosynthesis-like protein KJA71_15260 PF02566 OsmC-like protein KJA71_15265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJA71_15265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJA71_15270 PF03652 Holliday junction resolvase KJA71_15275 PF02622 Uncharacterized ACR, COG1678 KJA71_15280 PF00117 Glutamine amidotransferase class-I KJA71_15280 PF13673 Acetyltransferase (GNAT) domain KJA71_15280 PF13302 Acetyltransferase (GNAT) domain KJA71_15280 PF03352 Methyladenine glycosylase KJA71_15280 PF00958 GMP synthase C terminal domain KJA71_15295 PF03211 Pectate lyase KJA71_15300 PF00437 Type II/IV secretion system protein KJA71_15305 PF00437 Type II/IV secretion system protein KJA71_15310 PF01168 Alanine racemase, N-terminal domain KJA71_15315 PF03807 NADP oxidoreductase coenzyme F420-dependent KJA71_15315 PF14748 Pyrroline-5-carboxylate reductase dimerisation KJA71_15325 PF01551 Peptidase family M23 KJA71_15345 PF01965 DJ-1/PfpI family KJA71_15355 PF02082 Transcriptional regulator KJA71_15360 PF01458 Uncharacterized protein family (UPF0051) KJA71_15365 PF00005 ABC transporter KJA71_15370 PF01458 Uncharacterized protein family (UPF0051) KJA71_15375 PF00266 Aminotransferase class-V KJA71_15385 PF00355 Rieske [2Fe-2S] domain KJA71_15390 PF07715 TonB-dependent Receptor Plug Domain KJA71_15390 PF00593 TonB dependent receptor KJA71_15395 PF18331 PKHD-type hydroxylase C-terminal domain KJA71_15395 PF13640 2OG-Fe(II) oxygenase superfamily KJA71_15420 PF02424 ApbE family KJA71_15425 PF00258 Flavodoxin KJA71_15425 PF00667 FAD binding domain KJA71_15425 PF00175 Oxidoreductase NAD-binding domain KJA71_15445 PF07687 Peptidase dimerisation domain KJA71_15445 PF01546 Peptidase family M20/M25/M40 KJA71_15455 PF01636 Phosphotransferase enzyme family KJA71_15460 PF00483 Nucleotidyl transferase KJA71_15465 PF00308 Bacterial dnaA protein KJA71_15470 PF01594 AI-2E family transporter KJA71_15480 PF02769 AIR synthase related protein, C-terminal domain KJA71_15480 PF00586 AIR synthase related protein, N-terminal domain KJA71_15490 PF00551 Formyl transferase KJA71_15510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJA71_15515 PF01722 BolA-like protein KJA71_15520 PF01380 SIS domain KJA71_15520 PF00571 CBS domain KJA71_15535 PF03968 OstA-like protein KJA71_15540 PF00005 ABC transporter KJA71_15545 PF04552 Sigma-54, DNA binding domain KJA71_15545 PF04963 Sigma-54 factor, core binding domain KJA71_15545 PF00309 Sigma-54 factor, Activator interacting domain (AID) KJA71_15550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KJA71_15555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KJA71_15560 PF02603 HPr Serine kinase N terminus KJA71_15560 PF07475 HPr Serine kinase C-terminal domain KJA71_15565 PF03668 P-loop ATPase protein family KJA71_15575 PF00381 PTS HPr component phosphorylation site KJA71_15580 PF00391 PEP-utilising enzyme, mobile domain KJA71_15580 PF05524 PEP-utilising enzyme, N-terminal KJA71_15580 PF02896 PEP-utilising enzyme, TIM barrel domain KJA71_15585 PF00571 CBS domain KJA71_15585 PF03448 MgtE intracellular N domain KJA71_15585 PF01769 Divalent cation transporter KJA71_15590 PF00756 Putative esterase KJA71_15600 PF02322 Cytochrome bd terminal oxidase subunit II KJA71_15605 PF01654 Cytochrome bd terminal oxidase subunit I KJA71_15615 PF00324 Amino acid permease KJA71_15620 PF00544 Pectate lyase KJA71_15625 PF00561 alpha/beta hydrolase fold KJA71_15635 PF00196 Bacterial regulatory proteins, luxR family KJA71_15645 PF00324 Amino acid permease KJA71_15665 PF12706 Beta-lactamase superfamily domain KJA71_15670 PF04820 Tryptophan halogenase KJA71_15695 PF09278 MerR, DNA binding KJA71_15695 PF00376 MerR family regulatory protein KJA71_15700 PF07690 Major Facilitator Superfamily KJA71_15710 PF03738 Glutathionylspermidine synthase preATP-grasp KJA71_15735 PF04012 PspA/IM30 family KJA71_15745 PF01243 Pyridoxamine 5'-phosphate oxidase KJA71_15745 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KJA71_15750 PF01202 Shikimate kinase KJA71_15755 PF01761 3-dehydroquinate synthase KJA71_15765 PF01208 Uroporphyrinogen decarboxylase (URO-D) KJA71_15835 PF00158 Sigma-54 interaction domain KJA71_15835 PF02954 Bacterial regulatory protein, Fis family KJA71_15835 PF01590 GAF domain KJA71_15840 PF07690 Major Facilitator Superfamily KJA71_15845 PF00512 His Kinase A (phospho-acceptor) domain KJA71_15845 PF17149 Periplasmic sensor domain found in signal transduction proteins KJA71_15845 PF00672 HAMP domain KJA71_15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_15845 PF01627 Hpt domain KJA71_15845 PF00072 Response regulator receiver domain KJA71_15850 PF01627 Hpt domain KJA71_15850 PF17149 Periplasmic sensor domain found in signal transduction proteins KJA71_15850 PF00672 HAMP domain KJA71_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_15850 PF00512 His Kinase A (phospho-acceptor) domain KJA71_15850 PF00072 Response regulator receiver domain KJA71_15860 PF00072 Response regulator receiver domain KJA71_15860 PF01627 Hpt domain KJA71_15860 PF00512 His Kinase A (phospho-acceptor) domain KJA71_15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_15865 PF04264 YceI-like domain KJA71_15885 PF03313 Serine dehydratase alpha chain KJA71_15885 PF03315 Serine dehydratase beta chain KJA71_15890 PF12697 Alpha/beta hydrolase family KJA71_15895 PF00696 Amino acid kinase family KJA71_15895 PF00742 Homoserine dehydrogenase KJA71_15895 PF03447 Homoserine dehydrogenase, NAD binding domain KJA71_15900 PF01053 Cys/Met metabolism PLP-dependent enzyme KJA71_15905 PF00561 alpha/beta hydrolase fold KJA71_15910 PF01476 LysM domain KJA71_15910 PF08525 Opacity-associated protein A N-terminal motif KJA71_15910 PF01551 Peptidase family M23 KJA71_15915 PF00009 Elongation factor Tu GTP binding domain KJA71_15915 PF16658 Class II release factor RF3, C-terminal domain KJA71_15920 PF03006 Haemolysin-III related KJA71_15925 PF05170 AsmA family KJA71_15930 PF00571 CBS domain KJA71_15930 PF00478 IMP dehydrogenase / GMP reductase domain KJA71_15935 PF00535 Glycosyl transferase family 2 KJA71_15940 PF00912 Transglycosylase KJA71_15945 PF01430 Hsp33 protein KJA71_15955 PF07715 TonB-dependent Receptor Plug Domain KJA71_15955 PF00593 TonB dependent receptor KJA71_15965 PF00440 Bacterial regulatory proteins, tetR family KJA71_15970 PF00561 alpha/beta hydrolase fold KJA71_15975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA71_15975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA71_15975 PF09317 Domain of unknown function (DUF1974) KJA71_16005 PF01597 Glycine cleavage H-protein KJA71_16010 PF01571 Aminomethyltransferase folate-binding domain KJA71_16010 PF08669 Glycine cleavage T-protein C-terminal barrel domain KJA71_16020 PF01145 SPFH domain / Band 7 family KJA71_16020 PF16200 C-terminal region of band_7 KJA71_16025 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KJA71_16030 PF03819 MazG nucleotide pyrophosphohydrolase domain KJA71_16035 PF00459 Inositol monophosphatase family KJA71_16040 PF00293 NUDIX domain KJA71_16045 PF00202 Aminotransferase class-III KJA71_16050 PF04452 RNA methyltransferase KJA71_16055 PF02685 Glucokinase KJA71_16070 PF01476 LysM domain KJA71_16070 PF00704 Glycosyl hydrolases family 18 KJA71_16075 PF07691 PA14 domain KJA71_16075 PF02838 Glycosyl hydrolase family 20, domain 2 KJA71_16075 PF00728 Glycosyl hydrolase family 20, catalytic domain KJA71_16085 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_16085 PF07691 PA14 domain KJA71_16085 PF01915 Glycosyl hydrolase family 3 C-terminal domain KJA71_16085 PF14310 Fibronectin type III-like domain KJA71_16095 PF01301 Glycosyl hydrolases family 35 KJA71_16100 PF13520 Amino acid permease KJA71_16110 PF02056 Family 4 glycosyl hydrolase KJA71_16110 PF11975 Family 4 glycosyl hydrolase C-terminal domain KJA71_16120 PF17678 Glycosyl hydrolase family 92 N-terminal domain KJA71_16120 PF07971 Glycosyl hydrolase family 92 KJA71_16125 PF01301 Glycosyl hydrolases family 35 KJA71_16155 PF03932 CutC family KJA71_16160 PF01112 Asparaginase KJA71_16165 PF13302 Acetyltransferase (GNAT) domain KJA71_16180 PF02895 Signal transducing histidine kinase, homodimeric domain KJA71_16180 PF00072 Response regulator receiver domain KJA71_16180 PF01627 Hpt domain KJA71_16180 PF01584 CheW-like domain KJA71_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_16185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_16185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KJA71_16190 PF01584 CheW-like domain KJA71_16195 PF00072 Response regulator receiver domain KJA71_16200 PF00072 Response regulator receiver domain KJA71_16205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KJA71_16205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KJA71_16215 PF03747 ADP-ribosylglycohydrolase KJA71_16220 PF00814 Glycoprotease family KJA71_16225 PF04851 Type III restriction enzyme, res subunit KJA71_16225 PF13307 Helicase C-terminal domain KJA71_16235 PF14814 Bifunctional transglycosylase second domain KJA71_16235 PF00912 Transglycosylase KJA71_16235 PF00905 Penicillin binding protein transpeptidase domain KJA71_16240 PF00535 Glycosyl transferase family 2 KJA71_16250 PF04607 Region found in RelA / SpoT proteins KJA71_16250 PF02824 TGS domain KJA71_16250 PF13291 ACT domain KJA71_16255 PF08042 PqqA family KJA71_16260 PF12706 Beta-lactamase superfamily domain KJA71_16265 PF03070 TENA/THI-4/PQQC family KJA71_16270 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KJA71_16275 PF04055 Radical SAM superfamily KJA71_16275 PF13186 Iron-sulfur cluster-binding domain KJA71_16290 PF02685 Glucokinase KJA71_16305 PF00270 DEAD/DEAH box helicase KJA71_16305 PF11898 Domain of unknown function (DUF3418) KJA71_16305 PF04408 Helicase associated domain (HA2) KJA71_16305 PF00271 Helicase conserved C-terminal domain KJA71_16305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KJA71_16310 PF00210 Ferritin-like domain KJA71_16315 PF00570 HRDC domain KJA71_16315 PF00270 DEAD/DEAH box helicase KJA71_16315 PF00271 Helicase conserved C-terminal domain KJA71_16315 PF16124 RecQ zinc-binding KJA71_16315 PF09382 RQC domain KJA71_16340 PF02203 Tar ligand binding domain homologue KJA71_16340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_16340 PF00672 HAMP domain KJA71_16345 PF01810 LysE type translocator KJA71_16350 PF03466 LysR substrate binding domain KJA71_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_16360 PF13426 PAS domain KJA71_16360 PF13581 Histidine kinase-like ATPase domain KJA71_16360 PF07536 HWE histidine kinase KJA71_16365 PF06508 Queuosine biosynthesis protein QueC KJA71_16375 PF04055 Radical SAM superfamily KJA71_16385 PF00691 OmpA family KJA71_16390 PF07676 WD40-like Beta Propeller Repeat KJA71_16390 PF04052 TolB amino-terminal domain KJA71_16400 PF02472 Biopolymer transport protein ExbD/TolR KJA71_16405 PF01618 MotA/TolQ/ExbB proton channel family KJA71_16410 PF03061 Thioesterase superfamily KJA71_16415 PF05491 RuvB C-terminal winged helix domain KJA71_16415 PF05496 Holliday junction DNA helicase RuvB P-loop domain KJA71_16415 PF17864 RuvB AAA lid domain KJA71_16425 PF02705 K+ potassium transporter KJA71_16430 PF07499 RuvA, C-terminal domain KJA71_16430 PF01330 RuvA N terminal domain KJA71_16435 PF02075 Crossover junction endodeoxyribonuclease RuvC KJA71_16440 PF01709 Transcriptional regulator KJA71_16455 PF02938 GAD domain KJA71_16455 PF00152 tRNA synthetases class II (D, K and N) KJA71_16455 PF01336 OB-fold nucleic acid binding domain KJA71_16470 PF07690 Major Facilitator Superfamily KJA71_16485 PF05506 Domain of unknown function (DUF756) KJA71_16485 PF04185 Phosphoesterase family KJA71_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_16505 PF03466 LysR substrate binding domain KJA71_16515 PF00005 ABC transporter KJA71_16515 PF12848 ABC transporter KJA71_16520 PF07715 TonB-dependent Receptor Plug Domain KJA71_16520 PF00593 TonB dependent receptor KJA71_16530 PF07715 TonB-dependent Receptor Plug Domain KJA71_16530 PF00593 TonB dependent receptor KJA71_16535 PF07715 TonB-dependent Receptor Plug Domain KJA71_16535 PF00593 TonB dependent receptor KJA71_16540 PF00067 Cytochrome P450 KJA71_16545 PF00999 Sodium/hydrogen exchanger family KJA71_16545 PF02254 TrkA-N domain KJA71_16570 PF00593 TonB dependent receptor KJA71_16570 PF07660 Secretin and TonB N terminus short domain KJA71_16570 PF07715 TonB-dependent Receptor Plug Domain KJA71_16580 PF06276 Ferric iron reductase FhuF-like transporter KJA71_16580 PF04183 IucA / IucC family KJA71_16585 PF07690 Major Facilitator Superfamily KJA71_16590 PF06276 Ferric iron reductase FhuF-like transporter KJA71_16590 PF04183 IucA / IucC family KJA71_16595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KJA71_16595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KJA71_16610 PF02654 Cobalamin-5-phosphate synthase KJA71_16620 PF02277 Phosphoribosyltransferase KJA71_16625 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KJA71_16630 PF07685 CobB/CobQ-like glutamine amidotransferase domain KJA71_16630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KJA71_16635 PF00155 Aminotransferase class I and II KJA71_16640 PF03186 CobD/Cbib protein KJA71_16640 PF17113 Regulatory signalling modulator protein AmpE KJA71_16645 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP KJA71_16645 PF12557 Cob(I)alamin adenosyltransferase N terminal KJA71_16660 PF07715 TonB-dependent Receptor Plug Domain KJA71_16660 PF00593 TonB dependent receptor KJA71_16665 PF02861 Clp amino terminal domain, pathogenicity island component KJA71_16665 PF10431 C-terminal, D2-small domain, of ClpB protein KJA71_16665 PF07724 AAA domain (Cdc48 subfamily) KJA71_16665 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_16665 PF17871 AAA lid domain KJA71_16670 PF00005 ABC transporter KJA71_16675 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_16680 PF09084 NMT1/THI5 like KJA71_16685 PF00248 Aldo/keto reductase family KJA71_16690 PF00296 Luciferase-like monooxygenase KJA71_16695 PF00593 TonB dependent receptor KJA71_16695 PF07715 TonB-dependent Receptor Plug Domain KJA71_16700 PF01541 GIY-YIG catalytic domain KJA71_16735 PF00593 TonB dependent receptor KJA71_16735 PF07715 TonB-dependent Receptor Plug Domain KJA71_16740 PF02358 Trehalose-phosphatase KJA71_16745 PF00723 Glycosyl hydrolases family 15 KJA71_16750 PF00982 Glycosyltransferase family 20 KJA71_16755 PF01011 PQQ enzyme repeat KJA71_16765 PF04134 Protein of unknown function, DUF393 KJA71_16775 PF02578 Multi-copper polyphenol oxidoreductase laccase KJA71_16780 PF00849 RNA pseudouridylate synthase KJA71_16785 PF13525 Outer membrane lipoprotein KJA71_16795 PF00795 Carbon-nitrogen hydrolase KJA71_16795 PF02540 NAD synthase KJA71_16815 PF13406 Transglycosylase SLT domain KJA71_16820 PF01526 Tn3 transposase DDE domain KJA71_16820 PF13700 Domain of unknown function (DUF4158) KJA71_16835 PF01129 NAD:arginine ADP-ribosyltransferase KJA71_16855 PF00549 CoA-ligase KJA71_16855 PF02629 CoA binding domain KJA71_16860 PF00549 CoA-ligase KJA71_16860 PF08442 ATP-grasp domain KJA71_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_16865 PF00512 His Kinase A (phospho-acceptor) domain KJA71_16870 PF02954 Bacterial regulatory protein, Fis family KJA71_16870 PF00158 Sigma-54 interaction domain KJA71_16870 PF00072 Response regulator receiver domain KJA71_16875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA71_16875 PF00437 Type II/IV secretion system protein KJA71_16880 PF00437 Type II/IV secretion system protein KJA71_16880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA71_16885 PF00437 Type II/IV secretion system protein KJA71_16885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA71_16890 PF07963 Prokaryotic N-terminal methylation motif KJA71_16890 PF00114 Pilin (bacterial filament) KJA71_16895 PF07963 Prokaryotic N-terminal methylation motif KJA71_16895 PF00114 Pilin (bacterial filament) KJA71_16900 PF00482 Type II secretion system (T2SS), protein F KJA71_16905 PF01478 Type IV leader peptidase family KJA71_16905 PF06750 Bacterial Peptidase A24 N-terminal domain KJA71_16910 PF01121 Dephospho-CoA kinase KJA71_16935 PF16736 Single Cache-like KJA71_16935 PF00989 PAS fold KJA71_16935 PF00512 His Kinase A (phospho-acceptor) domain KJA71_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_16940 PF00486 Transcriptional regulatory protein, C terminal KJA71_16940 PF00072 Response regulator receiver domain KJA71_16955 PF00128 Alpha amylase, catalytic domain KJA71_16955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJA71_17020 PF04002 RadC-like JAB domain KJA71_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_17045 PF13426 PAS domain KJA71_17045 PF00072 Response regulator receiver domain KJA71_17050 PF00072 Response regulator receiver domain KJA71_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_17050 PF13426 PAS domain KJA71_17130 PF08448 PAS fold KJA71_17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_17130 PF00512 His Kinase A (phospho-acceptor) domain KJA71_17130 PF00072 Response regulator receiver domain KJA71_17130 PF13188 PAS domain KJA71_17160 PF13676 TIR domain KJA71_17185 PF00657 GDSL-like Lipase/Acylhydrolase KJA71_17185 PF03797 Autotransporter beta-domain KJA71_17195 PF05690 Thiazole biosynthesis protein ThiG KJA71_17200 PF02390 Putative methyltransferase KJA71_17205 PF02080 TrkA-C domain KJA71_17205 PF03600 Citrate transporter KJA71_17220 PF01557 Fumarylacetoacetate (FAA) hydrolase family KJA71_17225 PF01741 Large-conductance mechanosensitive channel, MscL KJA71_17235 PF00356 Bacterial regulatory proteins, lacI family KJA71_17245 PF00703 Glycosyl hydrolases family 2 KJA71_17245 PF02837 Glycosyl hydrolases family 2, sugar binding domain KJA71_17245 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain KJA71_17250 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KJA71_17250 PF14508 Glycosyl-hydrolase 97 N-terminal KJA71_17250 PF10566 Glycoside hydrolase 97 KJA71_17260 PF00135 Carboxylesterase family KJA71_17265 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJA71_17265 PF00588 SpoU rRNA Methylase family KJA71_17275 PF11838 ERAP1-like C-terminal domain KJA71_17275 PF01433 Peptidase family M1 domain KJA71_17310 PF00873 AcrB/AcrD/AcrF family KJA71_17315 PF00529 HlyD membrane-fusion protein of T1SS KJA71_17315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_17325 PF00009 Elongation factor Tu GTP binding domain KJA71_17330 PF01507 Phosphoadenosine phosphosulfate reductase family KJA71_17335 PF00667 FAD binding domain KJA71_17335 PF00258 Flavodoxin KJA71_17335 PF00175 Oxidoreductase NAD-binding domain KJA71_17340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KJA71_17340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KJA71_17345 PF01507 Phosphoadenosine phosphosulfate reductase family KJA71_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_17365 PF00512 His Kinase A (phospho-acceptor) domain KJA71_17365 PF01627 Hpt domain KJA71_17365 PF00072 Response regulator receiver domain KJA71_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_17375 PF03466 LysR substrate binding domain KJA71_17380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJA71_17380 PF10414 Sirohaem synthase dimerisation region KJA71_17380 PF14824 Sirohaem biosynthesis protein central KJA71_17385 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_17395 PF01661 Macro domain KJA71_17400 PF00274 Fructose-bisphosphate aldolase class-I KJA71_17405 PF02887 Pyruvate kinase, alpha/beta domain KJA71_17405 PF00224 Pyruvate kinase, barrel domain KJA71_17410 PF13419 Haloacid dehalogenase-like hydrolase KJA71_17415 PF00162 Phosphoglycerate kinase KJA71_17435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KJA71_17435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KJA71_17445 PF03922 OmpW family KJA71_17450 PF03922 OmpW family KJA71_17460 PF04273 Putative phosphatase (DUF442) KJA71_17460 PF00753 Metallo-beta-lactamase superfamily KJA71_17470 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_17475 PF03459 TOBE domain KJA71_17475 PF00005 ABC transporter KJA71_17510 PF03734 L,D-transpeptidase catalytic domain KJA71_17510 PF01476 LysM domain KJA71_17515 PF04225 Opacity-associated protein A LysM-like domain KJA71_17515 PF01551 Peptidase family M23 KJA71_17525 PF07715 TonB-dependent Receptor Plug Domain KJA71_17525 PF00593 TonB dependent receptor KJA71_17530 PF12146 Serine aminopeptidase, S33 KJA71_17535 PF02780 Transketolase, C-terminal domain KJA71_17535 PF00456 Transketolase, thiamine diphosphate binding domain KJA71_17535 PF02779 Transketolase, pyrimidine binding domain KJA71_17540 PF00375 Sodium:dicarboxylate symporter family KJA71_17550 PF00092 von Willebrand factor type A domain KJA71_17550 PF07584 Aerotolerance regulator N-terminal KJA71_17570 PF17863 AAA lid domain KJA71_17570 PF07726 ATPase family associated with various cellular activities (AAA) KJA71_17580 PF07660 Secretin and TonB N terminus short domain KJA71_17580 PF03958 Bacterial type II/III secretion system short domain KJA71_17580 PF00263 Bacterial type II and III secretion system protein KJA71_17580 PF11741 AMIN domain KJA71_17585 PF04351 Pilus assembly protein, PilP KJA71_17590 PF04350 Pilus assembly protein, PilO KJA71_17595 PF05137 Fimbrial assembly protein (PilN) KJA71_17600 PF11104 Type IV pilus assembly protein PilM; KJA71_17605 PF17092 Penicillin-binding protein OB-like domain KJA71_17605 PF00912 Transglycosylase KJA71_17605 PF00905 Penicillin binding protein transpeptidase domain KJA71_17615 PF00285 Citrate synthase, C-terminal domain KJA71_17620 PF01197 Ribosomal protein L31 KJA71_17625 PF01156 Inosine-uridine preferring nucleoside hydrolase KJA71_17630 PF00270 DEAD/DEAH box helicase KJA71_17630 PF00271 Helicase conserved C-terminal domain KJA71_17630 PF17191 RecG wedge domain KJA71_17635 PF01042 Endoribonuclease L-PSP KJA71_17640 PF04607 Region found in RelA / SpoT proteins KJA71_17640 PF02824 TGS domain KJA71_17640 PF13291 ACT domain KJA71_17645 PF01192 RNA polymerase Rpb6 KJA71_17650 PF00625 Guanylate kinase KJA71_17655 PF03755 YicC-like family, N-terminal region KJA71_17655 PF08340 Domain of unknown function (DUF1732) KJA71_17660 PF01138 3' exoribonuclease family, domain 1 KJA71_17660 PF03725 3' exoribonuclease family, domain 2 KJA71_17670 PF01725 Ham1 family KJA71_17675 PF04055 Radical SAM superfamily KJA71_17675 PF06969 HemN C-terminal domain KJA71_17690 PF00557 Metallopeptidase family M24 KJA71_17700 PF05195 Aminopeptidase P, N-terminal domain KJA71_17700 PF00557 Metallopeptidase family M24 KJA71_17705 PF03695 Uncharacterised protein family (UPF0149) KJA71_17715 PF05164 Cell division protein ZapA KJA71_17725 PF01812 5-formyltetrahydrofolate cyclo-ligase family KJA71_17735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KJA71_17745 PF13369 Transglutaminase-like superfamily KJA71_17750 PF00301 Rubredoxin KJA71_17755 PF02581 Thiamine monophosphate synthase KJA71_17770 PF00202 Aminotransferase class-III KJA71_17775 PF00196 Bacterial regulatory proteins, luxR family KJA71_17775 PF17874 MalT-like TPR region KJA71_17780 PF00127 Copper binding proteins, plastocyanin/azurin family KJA71_17785 PF00155 Aminotransferase class I and II KJA71_17795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KJA71_17795 PF00034 Cytochrome c KJA71_17800 PF01593 Flavin containing amine oxidoreductase KJA71_17815 PF00202 Aminotransferase class-III KJA71_17820 PF00027 Cyclic nucleotide-binding domain KJA71_17820 PF00520 Ion transport protein KJA71_17840 PF01569 PAP2 superfamily KJA71_17845 PF01062 Bestrophin, RFP-TM, chloride channel KJA71_17855 PF08245 Mur ligase middle domain KJA71_17855 PF01225 Mur ligase family, catalytic domain KJA71_17855 PF02875 Mur ligase family, glutamate ligase domain KJA71_17865 PF00365 Phosphofructokinase KJA71_17875 PF03030 Inorganic H+ pyrophosphatase KJA71_17885 PF00719 Inorganic pyrophosphatase KJA71_17895 PF00593 TonB dependent receptor KJA71_17895 PF07715 TonB-dependent Receptor Plug Domain KJA71_17900 PF12833 Helix-turn-helix domain KJA71_17905 PF00486 Transcriptional regulatory protein, C terminal KJA71_17905 PF18500 CadC C-terminal domain 1 KJA71_17910 PF13667 ThiC-associated domain KJA71_17910 PF01964 Radical SAM ThiC family KJA71_17915 PF07715 TonB-dependent Receptor Plug Domain KJA71_17915 PF00593 TonB dependent receptor KJA71_17920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_17920 PF00672 HAMP domain KJA71_17930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KJA71_17930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KJA71_17935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KJA71_17935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJA71_17935 PF00205 Thiamine pyrophosphate enzyme, central domain KJA71_17945 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_17950 PF08502 LeuA allosteric (dimerisation) domain KJA71_17950 PF00682 HMGL-like KJA71_17955 PF00180 Isocitrate/isopropylmalate dehydrogenase KJA71_17960 PF00694 Aconitase C-terminal domain KJA71_17965 PF00330 Aconitase family (aconitate hydratase) KJA71_17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_17975 PF00990 Diguanylate cyclase, GGDEF domain KJA71_17990 PF02321 Outer membrane efflux protein KJA71_17995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KJA71_18000 PF03279 Bacterial lipid A biosynthesis acyltransferase KJA71_18025 PF00390 Malic enzyme, N-terminal domain KJA71_18025 PF03949 Malic enzyme, NAD binding domain KJA71_18025 PF01515 Phosphate acetyl/butaryl transferase KJA71_18030 PF00375 Sodium:dicarboxylate symporter family KJA71_18040 PF02743 Cache domain KJA71_18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_18040 PF00512 His Kinase A (phospho-acceptor) domain KJA71_18045 PF07690 Major Facilitator Superfamily KJA71_18055 PF03466 LysR substrate binding domain KJA71_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_18060 PF00248 Aldo/keto reductase family KJA71_18075 PF00072 Response regulator receiver domain KJA71_18075 PF00196 Bacterial regulatory proteins, luxR family KJA71_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_18085 PF00512 His Kinase A (phospho-acceptor) domain KJA71_18085 PF08521 Two-component sensor kinase N-terminal KJA71_18090 PF00486 Transcriptional regulatory protein, C terminal KJA71_18090 PF00072 Response regulator receiver domain KJA71_18100 PF03600 Citrate transporter KJA71_18105 PF00106 short chain dehydrogenase KJA71_18110 PF00356 Bacterial regulatory proteins, lacI family KJA71_18125 PF00128 Alpha amylase, catalytic domain KJA71_18140 PF03193 RsgA GTPase KJA71_18145 PF00155 Aminotransferase class I and II KJA71_18160 PF07715 TonB-dependent Receptor Plug Domain KJA71_18160 PF00593 TonB dependent receptor KJA71_18165 PF01522 Polysaccharide deacetylase KJA71_18170 PF00462 Glutaredoxin KJA71_18200 PF02645 Uncharacterised protein, DegV family COG1307 KJA71_18205 PF01327 Polypeptide deformylase KJA71_18210 PF03960 ArsC family KJA71_18225 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) KJA71_18230 PF01270 Glycosyl hydrolases family 8 KJA71_18235 PF03170 Bacterial cellulose synthase subunit KJA71_18240 PF03552 Cellulose synthase KJA71_18240 PF00535 Glycosyl transferase family 2 KJA71_18240 PF07238 PilZ domain KJA71_18255 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KJA71_18255 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KJA71_18290 PF07715 TonB-dependent Receptor Plug Domain KJA71_18290 PF00593 TonB dependent receptor KJA71_18300 PF00392 Bacterial regulatory proteins, gntR family KJA71_18300 PF07702 UTRA domain KJA71_18315 PF00263 Bacterial type II and III secretion system protein KJA71_18315 PF03958 Bacterial type II/III secretion system short domain KJA71_18325 PF10741 Type II secretion system (T2SS), protein M subtype b KJA71_18330 PF05137 Fimbrial assembly protein (PilN) KJA71_18335 PF03934 Type II secretion system (T2SS), protein K KJA71_18345 PF07963 Prokaryotic N-terminal methylation motif KJA71_18350 PF12019 Type II transport protein GspH KJA71_18355 PF08334 Type II secretion system (T2SS), protein G KJA71_18360 PF00482 Type II secretion system (T2SS), protein F KJA71_18365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA71_18365 PF00437 Type II/IV secretion system protein KJA71_18370 PF04151 Bacterial pre-peptidase C-terminal domain KJA71_18370 PF00082 Subtilase family KJA71_18375 PF03895 YadA-like membrane anchor domain KJA71_18375 PF05662 Coiled stalk of trimeric autotransporter adhesin KJA71_18375 PF05658 Head domain of trimeric autotransporter adhesin KJA71_18375 PF13018 Extended Signal Peptide of Type V secretion system KJA71_18380 PF00082 Subtilase family KJA71_18380 PF04151 Bacterial pre-peptidase C-terminal domain KJA71_18385 PF05658 Head domain of trimeric autotransporter adhesin KJA71_18385 PF05662 Coiled stalk of trimeric autotransporter adhesin KJA71_18385 PF03895 YadA-like membrane anchor domain KJA71_18385 PF13018 Extended Signal Peptide of Type V secretion system KJA71_18390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KJA71_18390 PF02769 AIR synthase related protein, C-terminal domain KJA71_18390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KJA71_18395 PF13098 Thioredoxin-like domain KJA71_18395 PF10411 Disulfide bond isomerase protein N-terminus KJA71_18400 PF00589 Phage integrase family KJA71_18400 PF02899 Phage integrase, N-terminal SAM-like domain KJA71_18415 PF03739 Lipopolysaccharide export system permease LptF/LptG KJA71_18425 PF02789 Cytosol aminopeptidase family, N-terminal domain KJA71_18425 PF00883 Cytosol aminopeptidase family, catalytic domain KJA71_18440 PF10458 Valyl tRNA synthetase tRNA binding arm KJA71_18440 PF00133 tRNA synthetases class I (I, L, M and V) KJA71_18440 PF08264 Anticodon-binding domain of tRNA KJA71_18445 PF00593 TonB dependent receptor KJA71_18445 PF07715 TonB-dependent Receptor Plug Domain KJA71_18450 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KJA71_18450 PF01464 Transglycosylase SLT domain KJA71_18455 PF00544 Pectate lyase KJA71_18470 PF01066 CDP-alcohol phosphatidyltransferase KJA71_18480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA71_18480 PF03129 Anticodon binding domain KJA71_18480 PF04073 Aminoacyl-tRNA editing domain KJA71_18485 PF00816 H-NS histone family KJA71_18495 PF02405 Permease MlaE KJA71_18500 PF00005 ABC transporter KJA71_18505 PF03886 ABC-type transport auxiliary lipoprotein component KJA71_18505 PF02470 MlaD protein KJA71_18525 PF05045 Rhamnan synthesis protein F KJA71_18525 PF14307 Glycosyltransferase WbsX KJA71_18530 PF01144 Coenzyme A transferase KJA71_18535 PF01144 Coenzyme A transferase KJA71_18540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA71_18540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA71_18540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA71_18540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA71_18545 PF01050 Mannose-6-phosphate isomerase KJA71_18545 PF00483 Nucleotidyl transferase KJA71_18550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KJA71_18550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KJA71_18550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KJA71_18555 PF04321 RmlD substrate binding domain KJA71_18560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KJA71_18565 PF00483 Nucleotidyl transferase KJA71_18570 PF16363 GDP-mannose 4,6 dehydratase KJA71_18575 PF01012 Electron transfer flavoprotein domain KJA71_18580 PF01012 Electron transfer flavoprotein domain KJA71_18580 PF00766 Electron transfer flavoprotein FAD-binding domain KJA71_18590 PF01040 UbiA prenyltransferase family KJA71_18595 PF04030 D-arabinono-1,4-lactone oxidase KJA71_18595 PF01565 FAD binding domain KJA71_18600 PF00106 short chain dehydrogenase KJA71_18610 PF01370 NAD dependent epimerase/dehydratase family KJA71_18615 PF01593 Flavin containing amine oxidoreductase KJA71_18640 PF00535 Glycosyl transferase family 2 KJA71_18650 PF00005 ABC transporter KJA71_18650 PF14524 Wzt C-terminal domain KJA71_18660 PF01053 Cys/Met metabolism PLP-dependent enzyme KJA71_18665 PF00291 Pyridoxal-phosphate dependent enzyme KJA71_18665 PF00571 CBS domain KJA71_18685 PF00437 Type II/IV secretion system protein KJA71_18690 PF14497 Glutathione S-transferase, C-terminal domain KJA71_18690 PF02798 Glutathione S-transferase, N-terminal domain KJA71_18700 PF00270 DEAD/DEAH box helicase KJA71_18700 PF00271 Helicase conserved C-terminal domain KJA71_18710 PF07715 TonB-dependent Receptor Plug Domain KJA71_18710 PF00593 TonB dependent receptor KJA71_18715 PF01242 6-pyruvoyl tetrahydropterin synthase KJA71_18730 PF13185 GAF domain KJA71_18740 PF00756 Putative esterase KJA71_18745 PF07715 TonB-dependent Receptor Plug Domain KJA71_18745 PF00593 TonB dependent receptor KJA71_18750 PF13419 Haloacid dehalogenase-like hydrolase KJA71_18755 PF00817 impB/mucB/samB family KJA71_18755 PF11799 impB/mucB/samB family C-terminal domain KJA71_18760 PF07977 FabA-like domain KJA71_18765 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_18765 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_18775 PF01432 Peptidase family M3 KJA71_18790 PF07732 Multicopper oxidase KJA71_18790 PF00394 Multicopper oxidase KJA71_18790 PF07731 Multicopper oxidase KJA71_18795 PF05275 Copper resistance protein B precursor (CopB) KJA71_18800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA71_18830 PF01380 SIS domain KJA71_18835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_18840 PF02687 FtsX-like permease family KJA71_18840 PF00005 ABC transporter KJA71_18840 PF12704 MacB-like periplasmic core domain KJA71_18845 PF02687 FtsX-like permease family KJA71_18845 PF12704 MacB-like periplasmic core domain KJA71_18845 PF00005 ABC transporter KJA71_18850 PF02687 FtsX-like permease family KJA71_18850 PF12704 MacB-like periplasmic core domain KJA71_18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_18865 PF00512 His Kinase A (phospho-acceptor) domain KJA71_18870 PF14602 Hexapeptide repeat of succinyl-transferase KJA71_18870 PF12804 MobA-like NTP transferase domain KJA71_18870 PF00132 Bacterial transferase hexapeptide (six repeats) KJA71_18885 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KJA71_18885 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KJA71_18890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA71_18890 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJA71_18895 PF00231 ATP synthase KJA71_18900 PF00306 ATP synthase alpha/beta chain, C terminal domain KJA71_18900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA71_18900 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJA71_18905 PF00213 ATP synthase delta (OSCP) subunit KJA71_18910 PF00430 ATP synthase B/B' CF(0) KJA71_18915 PF00137 ATP synthase subunit C KJA71_18920 PF00119 ATP synthase A chain KJA71_18940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_18940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA71_18950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA71_18950 PF00364 Biotin-requiring enzyme KJA71_18950 PF02817 e3 binding domain KJA71_18985 PF03180 NLPA lipoprotein KJA71_18990 PF00528 Binding-protein-dependent transport system inner membrane component KJA71_18995 PF00005 ABC transporter KJA71_18995 PF09383 NIL domain KJA71_19000 PF00892 EamA-like transporter family KJA71_19005 PF04461 Protein of unknown function (DUF520) KJA71_19015 PF01627 Hpt domain KJA71_19015 PF18415 Histidine kinase receptor ArcB trans-membrane domain KJA71_19015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_19015 PF00512 His Kinase A (phospho-acceptor) domain KJA71_19015 PF00989 PAS fold KJA71_19015 PF00072 Response regulator receiver domain KJA71_19035 PF13419 Haloacid dehalogenase-like hydrolase KJA71_19040 PF01479 S4 domain KJA71_19040 PF00849 RNA pseudouridylate synthase KJA71_19045 PF05175 Methyltransferase small domain KJA71_19045 PF08468 Methyltransferase small domain N-terminal KJA71_19055 PF07995 Glucose / Sorbosone dehydrogenase KJA71_19065 PF00989 PAS fold KJA71_19065 PF00512 His Kinase A (phospho-acceptor) domain KJA71_19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_19085 PF00842 Alanine racemase, C-terminal domain KJA71_19085 PF01168 Alanine racemase, N-terminal domain KJA71_19090 PF01266 FAD dependent oxidoreductase KJA71_19095 PF01037 Lrp/AsnC ligand binding domain KJA71_19105 PF01641 SelR domain KJA71_19115 PF01618 MotA/TolQ/ExbB proton channel family KJA71_19120 PF00691 OmpA family KJA71_19120 PF13677 Membrane MotB of proton-channel complex MotA/MotB KJA71_19145 PF01061 ABC-2 type transporter KJA71_19150 PF00005 ABC transporter KJA71_19155 PF00999 Sodium/hydrogen exchanger family KJA71_19160 PF02469 Fasciclin domain KJA71_19165 PF03167 Uracil DNA glycosylase superfamily KJA71_19175 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KJA71_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_19185 PF03466 LysR substrate binding domain KJA71_19190 PF03358 NADPH-dependent FMN reductase KJA71_19195 PF00248 Aldo/keto reductase family KJA71_19225 PF13520 Amino acid permease KJA71_19235 PF04397 LytTr DNA-binding domain KJA71_19235 PF00072 Response regulator receiver domain KJA71_19240 PF00672 HAMP domain KJA71_19240 PF02743 Cache domain KJA71_19240 PF06580 Histidine kinase KJA71_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_19255 PF05974 Domain of unknown function (DUF892) KJA71_19260 PF05067 Manganese containing catalase KJA71_19280 PF01339 CheB methylesterase KJA71_19280 PF01739 CheR methyltransferase, SAM binding domain KJA71_19280 PF03705 CheR methyltransferase, all-alpha domain KJA71_19280 PF08448 PAS fold KJA71_19295 PF00072 Response regulator receiver domain KJA71_19295 PF02954 Bacterial regulatory protein, Fis family KJA71_19295 PF00158 Sigma-54 interaction domain KJA71_19305 PF01654 Cytochrome bd terminal oxidase subunit I KJA71_19310 PF02322 Cytochrome bd terminal oxidase subunit II KJA71_19330 PF16363 GDP-mannose 4,6 dehydratase KJA71_19340 PF03275 UDP-galactopyranose mutase KJA71_19350 PF00005 ABC transporter KJA71_19350 PF00664 ABC transporter transmembrane region KJA71_19365 PF13823 Alcohol dehydrogenase GroES-associated KJA71_19365 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_19365 PF00107 Zinc-binding dehydrogenase KJA71_19410 PF07715 TonB-dependent Receptor Plug Domain KJA71_19410 PF00593 TonB dependent receptor KJA71_19425 PF00005 ABC transporter KJA71_19435 PF03466 LysR substrate binding domain KJA71_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_19440 PF01042 Endoribonuclease L-PSP KJA71_19465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA71_19465 PF00672 HAMP domain KJA71_19485 PF02525 Flavodoxin-like fold KJA71_19530 PF00557 Metallopeptidase family M24 KJA71_19555 PF04542 Sigma-70 region 2 KJA71_19555 PF04539 Sigma-70 region 3 KJA71_19555 PF04545 Sigma-70, region 4 KJA71_19555 PF03979 Sigma-70 factor, region 1.1 KJA71_19555 PF00140 Sigma-70 factor, region 1.2 KJA71_19555 PF04546 Sigma-70, non-essential region KJA71_19560 PF02580 D-Tyr-tRNA(Tyr) deacylase KJA71_19565 PF03279 Bacterial lipid A biosynthesis acyltransferase KJA71_19580 PF00925 GTP cyclohydrolase II KJA71_19600 PF00535 Glycosyl transferase family 2 KJA71_19615 PF01029 NusB family KJA71_19615 PF01189 16S rRNA methyltransferase RsmB/F KJA71_19620 PF02911 Formyl transferase, C-terminal domain KJA71_19620 PF00551 Formyl transferase KJA71_19625 PF01327 Polypeptide deformylase KJA71_19630 PF01476 LysM domain KJA71_19635 PF02481 DNA recombination-mediator protein A KJA71_19635 PF17782 DprA winged helix domain KJA71_19640 PF04361 Protein of unknown function (DUF494) KJA71_19645 PF07963 Prokaryotic N-terminal methylation motif KJA71_19645 PF00114 Pilin (bacterial filament) KJA71_19655 PF01751 Toprim domain KJA71_19655 PF13368 Topoisomerase C-terminal repeat KJA71_19655 PF01131 DNA topoisomerase KJA71_19660 PF01300 Telomere recombination KJA71_19685 PF01343 Peptidase family S49 KJA71_19690 PF01554 MatE KJA71_19710 PF00270 DEAD/DEAH box helicase KJA71_19710 PF00271 Helicase conserved C-terminal domain KJA71_19710 PF17764 3′ DNA-binding domain (3′BD) KJA71_19710 PF18074 Primosomal protein N C-terminal domain KJA71_19710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KJA71_19715 PF00043 Glutathione S-transferase, C-terminal domain KJA71_19715 PF13417 Glutathione S-transferase, N-terminal domain KJA71_19730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA71_19735 PF03458 UPF0126 domain KJA71_19740 PF04542 Sigma-70 region 2 KJA71_19740 PF04545 Sigma-70, region 4 KJA71_19745 PF03167 Uracil DNA glycosylase superfamily KJA71_19750 PF01339 CheB methylesterase KJA71_19750 PF00072 Response regulator receiver domain KJA71_19755 PF18075 FtsX extracellular domain KJA71_19760 PF00005 ABC transporter KJA71_19765 PF00270 DEAD/DEAH box helicase KJA71_19765 PF12300 ATP-dependent RNA helicase RhlB KJA71_19765 PF00271 Helicase conserved C-terminal domain KJA71_19770 PF00085 Thioredoxin KJA71_19775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA71_19775 PF07498 Rho termination factor, N-terminal domain KJA71_19775 PF07497 Rho termination factor, RNA-binding domain KJA71_19780 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KJA71_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_19785 PF03466 LysR substrate binding domain KJA71_19795 PF03971 Monomeric isocitrate dehydrogenase KJA71_19810 PF09704 CRISPR-associated protein (Cas_Cas5) KJA71_19830 PF01867 CRISPR associated protein Cas1 KJA71_19835 PF09827 CRISPR associated protein Cas2 KJA71_19845 PF04972 BON domain KJA71_19845 PF01476 LysM domain KJA71_19850 PF14489 QueF-like protein KJA71_19850 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KJA71_19855 PF07687 Peptidase dimerisation domain KJA71_19855 PF01546 Peptidase family M20/M25/M40 KJA71_19860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_19865 PF00873 AcrB/AcrD/AcrF family KJA71_19870 PF00873 AcrB/AcrD/AcrF family KJA71_19875 PF07063 Domain of unknown function (DUF1338) KJA71_19915 PF01427 D-ala-D-ala dipeptidase KJA71_19920 PF01510 N-acetylmuramoyl-L-alanine amidase KJA71_19930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA71_19930 PF13378 Enolase C-terminal domain-like KJA71_19940 PF13520 Amino acid permease KJA71_19955 PF05360 yiaA/B two helix domain KJA71_19960 PF07995 Glucose / Sorbosone dehydrogenase KJA71_19965 PF14310 Fibronectin type III-like domain KJA71_19965 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_19965 PF01915 Glycosyl hydrolase family 3 C-terminal domain KJA71_19970 PF02152 Dihydroneopterin aldolase KJA71_19975 PF00814 Glycoprotease family KJA71_19980 PF01165 Ribosomal protein S21 KJA71_19985 PF09424 Yqey-like protein KJA71_19990 PF03631 Virulence factor BrkB KJA71_19995 PF01807 CHC2 zinc finger KJA71_19995 PF10410 DnaB-helicase binding domain of primase KJA71_19995 PF08278 DNA primase DnaG DnaB-binding KJA71_19995 PF08275 DNA primase catalytic core, N-terminal domain KJA71_20000 PF13593 SBF-like CPA transporter family (DUF4137) KJA71_20010 PF01040 UbiA prenyltransferase family KJA71_20035 PF00510 Cytochrome c oxidase subunit III KJA71_20040 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KJA71_20050 PF00115 Cytochrome C and Quinol oxidase polypeptide I KJA71_20055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KJA71_20055 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KJA71_20065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KJA71_20065 PF14850 DNA-binding domain of Proline dehydrogenase KJA71_20065 PF01619 Proline dehydrogenase KJA71_20065 PF00171 Aldehyde dehydrogenase family KJA71_20095 PF00579 tRNA synthetases class I (W and Y) KJA71_20100 PF01551 Peptidase family M23 KJA71_20100 PF04225 Opacity-associated protein A LysM-like domain KJA71_20105 PF03702 Anhydro-N-acetylmuramic acid kinase KJA71_20115 PF07690 Major Facilitator Superfamily KJA71_20120 PF03372 Endonuclease/Exonuclease/phosphatase family KJA71_20125 PF00156 Phosphoribosyl transferase domain KJA71_20135 PF13614 AAA domain KJA71_20140 PF02195 ParB-like nuclease domain KJA71_20140 PF17762 HTH domain found in ParB protein KJA71_20150 PF01370 NAD dependent epimerase/dehydratase family KJA71_20155 PF00535 Glycosyl transferase family 2 KJA71_20170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA71_20170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA71_20170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA71_20170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA71_20175 PF00692 dUTPase KJA71_20180 PF04127 DNA / pantothenate metabolism flavoprotein KJA71_20180 PF02441 Flavoprotein KJA71_20185 PF04002 RadC-like JAB domain KJA71_20190 PF05746 DALR anticodon binding domain KJA71_20190 PF03485 Arginyl tRNA synthetase N terminal domain KJA71_20190 PF00750 tRNA synthetases class I (R) KJA71_20205 PF00106 short chain dehydrogenase KJA71_20210 PF01757 Acyltransferase family KJA71_20215 PF03033 Glycosyltransferase family 28 N-terminal domain KJA71_20220 PF00501 AMP-binding enzyme KJA71_20220 PF00668 Condensation domain KJA71_20220 PF00550 Phosphopantetheine attachment site KJA71_20220 PF00975 Thioesterase domain KJA71_20220 PF13193 AMP-binding enzyme C-terminal domain KJA71_20225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KJA71_20225 PF17810 Arginine decarboxylase helical bundle domain KJA71_20225 PF17944 Arginine decarboxylase C-terminal helical extension KJA71_20230 PF17284 Spermidine synthase tetramerisation domain KJA71_20255 PF00543 Nitrogen regulatory protein P-II KJA71_20260 PF04380 Membrane fusogenic activity KJA71_20265 PF13335 Magnesium chelatase, subunit ChlI C-terminal KJA71_20265 PF01078 Magnesium chelatase, subunit ChlI KJA71_20280 PF12792 CSS motif domain associated with EAL KJA71_20280 PF00563 EAL domain KJA71_20285 PF00487 Fatty acid desaturase KJA71_20290 PF00175 Oxidoreductase NAD-binding domain KJA71_20290 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_20290 PF00970 Oxidoreductase FAD-binding domain KJA71_20295 PF00440 Bacterial regulatory proteins, tetR family KJA71_20305 PF01139 tRNA-splicing ligase RtcB KJA71_20340 PF01370 NAD dependent epimerase/dehydratase family KJA71_20340 PF08338 Domain of unknown function (DUF1731) KJA71_20345 PF00072 Response regulator receiver domain KJA71_20345 PF00486 Transcriptional regulatory protein, C terminal KJA71_20350 PF00512 His Kinase A (phospho-acceptor) domain KJA71_20350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_20350 PF08521 Two-component sensor kinase N-terminal KJA71_20375 PF00595 PDZ domain KJA71_20395 PF01594 AI-2E family transporter KJA71_20400 PF13419 Haloacid dehalogenase-like hydrolase KJA71_20405 PF00883 Cytosol aminopeptidase family, catalytic domain KJA71_20405 PF02789 Cytosol aminopeptidase family, N-terminal domain KJA71_20415 PF04542 Sigma-70 region 2 KJA71_20415 PF08281 Sigma-70, region 4 KJA71_20420 PF00199 Catalase KJA71_20435 PF00072 Response regulator receiver domain KJA71_20435 PF00196 Bacterial regulatory proteins, luxR family KJA71_20440 PF07730 Histidine kinase KJA71_20445 PF13533 Biotin-lipoyl like KJA71_20450 PF00005 ABC transporter KJA71_20475 PF00892 EamA-like transporter family KJA71_20490 PF00753 Metallo-beta-lactamase superfamily KJA71_20495 PF00579 tRNA synthetases class I (W and Y) KJA71_20500 PF05532 CsbD-like KJA71_20515 PF00491 Arginase family KJA71_20540 PF02223 Thymidylate kinase KJA71_20555 PF03309 Type III pantothenate kinase KJA71_20560 PF02237 Biotin protein ligase C terminal domain KJA71_20560 PF03099 Biotin/lipoate A/B protein ligase family KJA71_20560 PF08279 HTH domain KJA71_20570 PF06167 Glucose-regulated metallo-peptidase M90 KJA71_20585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_20590 PF00072 Response regulator receiver domain KJA71_20590 PF00486 Transcriptional regulatory protein, C terminal KJA71_20600 PF01207 Dihydrouridine synthase (Dus) KJA71_20620 PF06733 DEAD_2 KJA71_20620 PF13307 Helicase C-terminal domain KJA71_20635 PF08501 Shikimate dehydrogenase substrate binding domain KJA71_20635 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KJA71_20635 PF01488 Shikimate / quinate 5-dehydrogenase KJA71_20645 PF00667 FAD binding domain KJA71_20645 PF00258 Flavodoxin KJA71_20645 PF00175 Oxidoreductase NAD-binding domain KJA71_20655 PF03466 LysR substrate binding domain KJA71_20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_20670 PF00490 Delta-aminolevulinic acid dehydratase KJA71_20695 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KJA71_20695 PF00326 Prolyl oligopeptidase family KJA71_20700 PF00043 Glutathione S-transferase, C-terminal domain KJA71_20700 PF02798 Glutathione S-transferase, N-terminal domain KJA71_20720 PF04820 Tryptophan halogenase KJA71_20735 PF00005 ABC transporter KJA71_20745 PF01381 Helix-turn-helix KJA71_20755 PF01229 Glycosyl hydrolases family 39 KJA71_20760 PF02583 Metal-sensitive transcriptional repressor KJA71_20765 PF01545 Cation efflux family KJA71_20765 PF16916 Dimerisation domain of Zinc Transporter KJA71_20775 PF00593 TonB dependent receptor KJA71_20775 PF07715 TonB-dependent Receptor Plug Domain KJA71_20785 PF01965 DJ-1/PfpI family KJA71_20785 PF12833 Helix-turn-helix domain KJA71_20790 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA71_20790 PF00175 Oxidoreductase NAD-binding domain KJA71_20790 PF00970 Oxidoreductase FAD-binding domain KJA71_20795 PF00005 ABC transporter KJA71_20800 PF01061 ABC-2 type transporter KJA71_20810 PF02558 Ketopantoate reductase PanE/ApbA KJA71_20810 PF08546 Ketopantoate reductase PanE/ApbA C terminal KJA71_20845 PF00268 Ribonucleotide reductase, small chain KJA71_20850 PF03477 ATP cone domain KJA71_20850 PF02867 Ribonucleotide reductase, barrel domain KJA71_20850 PF00317 Ribonucleotide reductase, all-alpha domain KJA71_20860 PF00583 Acetyltransferase (GNAT) family KJA71_20860 PF13380 CoA binding domain KJA71_20860 PF13607 Succinyl-CoA ligase like flavodoxin domain KJA71_20865 PF00571 CBS domain KJA71_20865 PF01769 Divalent cation transporter KJA71_20865 PF03448 MgtE intracellular N domain KJA71_20875 PF00999 Sodium/hydrogen exchanger family KJA71_20875 PF02254 TrkA-N domain KJA71_20880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KJA71_20880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KJA71_20885 PF00723 Glycosyl hydrolases family 15 KJA71_20900 PF05166 YcgL domain KJA71_20905 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_20905 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_20915 PF00535 Glycosyl transferase family 2 KJA71_20975 PF07977 FabA-like domain KJA71_20980 PF01553 Acyltransferase KJA71_20990 PF00550 Phosphopantetheine attachment site KJA71_20995 PF04820 Tryptophan halogenase KJA71_21015 PF07676 WD40-like Beta Propeller Repeat KJA71_21015 PF00326 Prolyl oligopeptidase family KJA71_21030 PF01218 Coproporphyrinogen III oxidase KJA71_21035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KJA71_21035 PF01612 3'-5' exonuclease KJA71_21035 PF00476 DNA polymerase family A KJA71_21035 PF01367 5'-3' exonuclease, C-terminal SAM fold KJA71_21045 PF06812 ImpA, N-terminal, type VI secretion system KJA71_21065 PF03793 PASTA domain KJA71_21065 PF00069 Protein kinase domain KJA71_21080 PF06761 Intracellular multiplication and human macrophage-killing KJA71_21080 PF14331 ImcF-related N-terminal domain KJA71_21080 PF06744 Type VI secretion protein IcmF C-terminal KJA71_21090 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KJA71_21105 PF04717 Type VI secretion system, phage-baseplate injector KJA71_21120 PF03793 PASTA domain KJA71_21120 PF00069 Protein kinase domain KJA71_21130 PF08281 Sigma-70, region 4 KJA71_21130 PF04542 Sigma-70 region 2 KJA71_21145 PF00328 Histidine phosphatase superfamily (branch 2) KJA71_21180 PF00004 ATPase family associated with various cellular activities (AAA) KJA71_21180 PF17871 AAA lid domain KJA71_21180 PF10431 C-terminal, D2-small domain, of ClpB protein KJA71_21180 PF07724 AAA domain (Cdc48 subfamily) KJA71_21190 PF05947 Type VI secretion system, TssF KJA71_21195 PF04965 Gene 25-like lysozyme KJA71_21200 PF07024 ImpE protein KJA71_21205 PF05638 Type VI secretion system effector, Hcp KJA71_21210 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KJA71_21215 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KJA71_21230 PF14602 Hexapeptide repeat of succinyl-transferase KJA71_21230 PF12464 Maltose acetyltransferase KJA71_21240 PF00580 UvrD/REP helicase N-terminal domain KJA71_21240 PF13361 UvrD-like helicase C-terminal domain KJA71_21250 PF13396 Phospholipase_D-nuclease N-terminal KJA71_21250 PF13091 PLD-like domain KJA71_21255 PF03466 LysR substrate binding domain KJA71_21255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_21260 PF03737 Aldolase/RraA KJA71_21265 PF04303 PrpF protein KJA71_21270 PF04909 Amidohydrolase KJA71_21275 PF00471 Ribosomal protein L33 KJA71_21280 PF00830 Ribosomal L28 family KJA71_21285 PF00873 AcrB/AcrD/AcrF family KJA71_21290 PF13533 Biotin-lipoyl like KJA71_21310 PF02527 rRNA small subunit methyltransferase G KJA71_21315 PF16655 PhoD-like phosphatase, N-terminal domain KJA71_21315 PF09423 PhoD-like phosphatase KJA71_21320 PF16655 PhoD-like phosphatase, N-terminal domain KJA71_21320 PF09423 PhoD-like phosphatase KJA71_21325 PF01648 4'-phosphopantetheinyl transferase superfamily KJA71_21330 PF04226 Transglycosylase associated protein KJA71_21340 PF03372 Endonuclease/Exonuclease/phosphatase family KJA71_21345 PF00480 ROK family KJA71_21355 PF09312 SurA N-terminal domain KJA71_21365 PF00474 Sodium:solute symporter family KJA71_21370 PF04341 Protein of unknown function, DUF485 KJA71_21380 PF13193 AMP-binding enzyme C-terminal domain KJA71_21380 PF00501 AMP-binding enzyme KJA71_21380 PF16177 Acetyl-coenzyme A synthetase N-terminus KJA71_21385 PF00072 Response regulator receiver domain KJA71_21385 PF00196 Bacterial regulatory proteins, luxR family KJA71_21405 PF04616 Glycosyl hydrolases family 43 KJA71_21405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KJA71_21415 PF00248 Aldo/keto reductase family KJA71_21430 PF01557 Fumarylacetoacetate (FAA) hydrolase family KJA71_21435 PF13378 Enolase C-terminal domain-like KJA71_21435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA71_21440 PF05336 L-rhamnose mutarotase KJA71_21445 PF07690 Major Facilitator Superfamily KJA71_21450 PF09339 IclR helix-turn-helix domain KJA71_21450 PF01614 Bacterial transcriptional regulator KJA71_21455 PF02659 Putative manganese efflux pump KJA71_21460 PF00512 His Kinase A (phospho-acceptor) domain KJA71_21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_21470 PF06165 Glycosyltransferase family 36 KJA71_21470 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KJA71_21485 PF01011 PQQ enzyme repeat KJA71_21485 PF13360 PQQ-like domain KJA71_21485 PF13570 PQQ-like domain KJA71_21505 PF04357 TamB, inner membrane protein subunit of TAM complex KJA71_21510 PF01103 Surface antigen KJA71_21510 PF17243 POTRA domain TamA domain 1 KJA71_21540 PF02092 Glycyl-tRNA synthetase beta subunit KJA71_21540 PF05746 DALR anticodon binding domain KJA71_21545 PF02091 Glycyl-tRNA synthetase alpha subunit KJA71_21550 PF00437 Type II/IV secretion system protein KJA71_21550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA71_21560 PF00958 GMP synthase C terminal domain KJA71_21560 PF00117 Glutamine amidotransferase class-I KJA71_21570 PF00902 Sec-independent protein translocase protein (TatC) KJA71_21575 PF02416 mttA/Hcf106 family KJA71_21580 PF02416 mttA/Hcf106 family KJA71_21590 PF00762 Ferrochelatase KJA71_21595 PF12697 Alpha/beta hydrolase family KJA71_21610 PF04381 Putative exonuclease, RdgC KJA71_21615 PF01171 PP-loop family KJA71_21625 PF00356 Bacterial regulatory proteins, lacI family KJA71_21630 PF07488 Glycosyl hydrolase family 67 middle domain KJA71_21630 PF03648 Glycosyl hydrolase family 67 N-terminus KJA71_21630 PF07477 Glycosyl hydrolase family 67 C-terminus KJA71_21640 PF13378 Enolase C-terminal domain-like KJA71_21640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA71_21645 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KJA71_21645 PF04616 Glycosyl hydrolases family 43 KJA71_21650 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA71_21650 PF07691 PA14 domain KJA71_21650 PF01915 Glycosyl hydrolase family 3 C-terminal domain KJA71_21650 PF14310 Fibronectin type III-like domain KJA71_21655 PF01232 Mannitol dehydrogenase Rossmann domain KJA71_21655 PF08125 Mannitol dehydrogenase C-terminal domain KJA71_21685 PF00171 Aldehyde dehydrogenase family KJA71_21710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KJA71_21710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KJA71_21730 PF08450 SMP-30/Gluconolactonase/LRE-like region KJA71_21735 PF00331 Glycosyl hydrolase family 10 KJA71_21740 PF16355 Domain of unknown function (DUF4982) KJA71_21740 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KJA71_21740 PF00703 Glycosyl hydrolases family 2 KJA71_21740 PF02837 Glycosyl hydrolases family 2, sugar binding domain KJA71_21740 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KJA71_21745 PF02614 Glucuronate isomerase KJA71_21750 PF00553 Cellulose binding domain KJA71_21750 PF00331 Glycosyl hydrolase family 10 KJA71_21750 PF03422 Carbohydrate binding module (family 6) KJA71_21760 PF03422 Carbohydrate binding module (family 6) KJA71_21760 PF00553 Cellulose binding domain KJA71_21760 PF00331 Glycosyl hydrolase family 10 KJA71_21780 PF04616 Glycosyl hydrolases family 43 KJA71_21840 PF14765 Polyketide synthase dehydratase KJA71_21840 PF00550 Phosphopantetheine attachment site KJA71_21840 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA71_21840 PF08659 KR domain KJA71_21840 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA71_21840 PF00107 Zinc-binding dehydrogenase KJA71_21840 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_21840 PF00698 Acyl transferase domain KJA71_21840 PF16197 Ketoacyl-synthetase C-terminal extension KJA71_21845 PF01553 Acyltransferase KJA71_21855 PF00356 Bacterial regulatory proteins, lacI family KJA71_21870 PF04820 Tryptophan halogenase KJA71_21875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KJA71_21880 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KJA71_21885 PF04337 Protein of unknown function, DUF480 KJA71_21900 PF00580 UvrD/REP helicase N-terminal domain KJA71_21900 PF13361 UvrD-like helicase C-terminal domain KJA71_21905 PF00265 Thymidine kinase KJA71_21910 PF01590 GAF domain KJA71_21910 PF00512 His Kinase A (phospho-acceptor) domain KJA71_21910 PF08446 PAS fold KJA71_21910 PF00360 Phytochrome region KJA71_21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA71_21915 PF04349 Periplasmic glucan biosynthesis protein, MdoG KJA71_21925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KJA71_21925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KJA71_21925 PF06827 Zinc finger found in FPG and IleRS KJA71_21955 PF03594 Benzoate membrane transport protein KJA71_21960 PF01590 GAF domain KJA71_21960 PF08446 PAS fold KJA71_21960 PF13426 PAS domain KJA71_21960 PF00360 Phytochrome region KJA71_21965 PF01126 Heme oxygenase KJA71_21970 PF07690 Major Facilitator Superfamily KJA71_21975 PF01263 Aldose 1-epimerase KJA71_21985 PF02810 SEC-C motif KJA71_21990 PF01925 Sulfite exporter TauE/SafE KJA71_22010 PF01227 GTP cyclohydrolase I KJA71_22020 PF07869 Protein of unknown function (DUF1656) KJA71_22025 PF00529 HlyD membrane-fusion protein of T1SS KJA71_22025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_22030 PF02321 Outer membrane efflux protein KJA71_22035 PF04632 Fusaric acid resistance protein family KJA71_22040 PF00083 Sugar (and other) transporter KJA71_22050 PF13396 Phospholipase_D-nuclease N-terminal KJA71_22050 PF13091 PLD-like domain KJA71_22075 PF01850 PIN domain KJA71_22110 PF00849 RNA pseudouridylate synthase KJA71_22135 PF02785 Biotin carboxylase C-terminal domain KJA71_22135 PF00289 Biotin carboxylase, N-terminal domain KJA71_22135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA71_22140 PF01425 Amidase KJA71_22170 PF13538 UvrD-like helicase C-terminal domain KJA71_22175 PF13361 UvrD-like helicase C-terminal domain KJA71_22175 PF00580 UvrD/REP helicase N-terminal domain KJA71_22175 PF12705 PD-(D/E)XK nuclease superfamily KJA71_22180 PF17946 RecC C-terminal domain KJA71_22195 PF00005 ABC transporter KJA71_22200 PF02405 Permease MlaE KJA71_22205 PF02470 MlaD protein KJA71_22210 PF05494 MlaC protein KJA71_22220 PF04333 MlaA lipoprotein KJA71_22230 PF00255 Glutathione peroxidase KJA71_22240 PF02646 RmuC family KJA71_22245 PF00107 Zinc-binding dehydrogenase KJA71_22245 PF08240 Alcohol dehydrogenase GroES-like domain KJA71_22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA71_22250 PF03466 LysR substrate binding domain KJA71_22260 PF13417 Glutathione S-transferase, N-terminal domain KJA71_22260 PF00043 Glutathione S-transferase, C-terminal domain KJA71_22270 PF13520 Amino acid permease KJA71_22275 PF17678 Glycosyl hydrolase family 92 N-terminal domain KJA71_22275 PF07971 Glycosyl hydrolase family 92 KJA71_22280 PF10947 Protein of unknown function (DUF2628) KJA71_22285 PF00990 Diguanylate cyclase, GGDEF domain KJA71_22290 PF13556 PucR C-terminal helix-turn-helix domain KJA71_22290 PF17853 GGDEF-like domain KJA71_22290 PF05651 Putative sugar diacid recognition KJA71_22295 PF02595 Glycerate kinase family KJA71_22300 PF07690 Major Facilitator Superfamily KJA71_22315 PF17785 PUA-like domain KJA71_22315 PF10672 S-adenosylmethionine-dependent methyltransferase KJA71_22320 PF03741 Integral membrane protein TerC family KJA71_22325 PF01694 Rhomboid family KJA71_22330 PF03009 Glycerophosphoryl diester phosphodiesterase family KJA71_22340 PF01569 PAP2 superfamily KJA71_22345 PF10396 GTP-binding protein TrmE N-terminus KJA71_22345 PF01926 50S ribosome-binding GTPase KJA71_22345 PF12631 MnmE helical domain KJA71_22350 PF01522 Polysaccharide deacetylase KJA71_22355 PF02096 60Kd inner membrane protein KJA71_22355 PF14849 YidC periplasmic domain KJA71_22360 PF00825 Ribonuclease P KJA71_22365 PF00468 Ribosomal protein L34 KJA71_22385 PF06733 DEAD_2 KJA71_22385 PF13307 Helicase C-terminal domain KJA71_22560 PF13614 AAA domain KJA71_22655 PF06834 TraU protein KJA71_22795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_22795 PF00529 HlyD membrane-fusion protein of T1SS KJA71_22800 PF00873 AcrB/AcrD/AcrF family KJA71_22815 PF00491 Arginase family KJA71_22830 PF04945 YHS domain KJA71_22835 PF05425 Copper resistance protein D KJA71_22865 PF05275 Copper resistance protein B precursor (CopB) KJA71_22870 PF07731 Multicopper oxidase KJA71_22870 PF07732 Multicopper oxidase KJA71_22870 PF00394 Multicopper oxidase KJA71_22905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_22905 PF00529 HlyD membrane-fusion protein of T1SS KJA71_22910 PF00873 AcrB/AcrD/AcrF family KJA71_22930 PF00403 Heavy-metal-associated domain KJA71_22935 PF02411 MerT mercuric transport protein KJA71_22940 PF09278 MerR, DNA binding KJA71_22940 PF00376 MerR family regulatory protein KJA71_22950 PF01451 Low molecular weight phosphotyrosine protein phosphatase KJA71_22955 PF03960 ArsC family KJA71_22960 PF03358 NADPH-dependent FMN reductase KJA71_22965 PF02040 Arsenical pump membrane protein KJA71_22975 PF00873 AcrB/AcrD/AcrF family KJA71_22980 PF00529 HlyD membrane-fusion protein of T1SS KJA71_22980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA71_23000 PF09278 MerR, DNA binding KJA71_23000 PF00376 MerR family regulatory protein KJA71_23010 PF01526 Tn3 transposase DDE domain KJA71_23010 PF13700 Domain of unknown function (DUF4158) KJA71_23185 PF00580 UvrD/REP helicase N-terminal domain KJA71_23185 PF13361 UvrD-like helicase C-terminal domain KJA71_23190 PF11412 Disulphide bond corrector protein DsbC KJA71_23190 PF02683 Cytochrome C biogenesis protein transmembrane region KJA71_23260 PF00580 UvrD/REP helicase N-terminal domain KJA71_23260 PF13361 UvrD-like helicase C-terminal domain KJA71_23295 PF04851 Type III restriction enzyme, res subunit KJA71_23295 PF00271 Helicase conserved C-terminal domain KJA71_23325 PF00436 Single-strand binding protein family KJA71_23360 PF17762 HTH domain found in ParB protein KJA71_23360 PF02195 ParB-like nuclease domain KJA71_23405 PF00565 Staphylococcal nuclease homologue KJA71_23410 PF04381 Putative exonuclease, RdgC KJA71_23440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KJA71_23440 PF10135 Rod binding protein KJA71_23460 PF13098 Thioredoxin-like domain KJA71_23460 PF10411 Disulfide bond isomerase protein N-terminus KJA71_23485 PF13614 AAA domain KJA71_23510 PF00239 Resolvase, N terminal domain KJA71_23510 PF02796 Helix-turn-helix domain of resolvase KJA71_23575 PF07015 VirC1 protein KJA71_23595 PF03377 TAL effector repeat KJA71_23620 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KJA71_23630 PF02796 Helix-turn-helix domain of resolvase KJA71_23630 PF00239 Resolvase, N terminal domain KJA71_23675 PF00239 Resolvase, N terminal domain KJA71_23675 PF02796 Helix-turn-helix domain of resolvase KJA71_23680 PF03377 TAL effector repeat KJA71_23690 PF13614 AAA domain KJA71_23765 PF13614 AAA domain KJA71_23770 PF02195 ParB-like nuclease domain KJA71_23805 PF02534 Type IV secretory system Conjugative DNA transfer KJA71_23810 PF00437 Type II/IV secretion system protein KJA71_23815 PF03743 Bacterial conjugation TrbI-like protein KJA71_23820 PF03524 Conjugal transfer protein KJA71_23825 PF04335 VirB8 protein KJA71_23830 PF08139 Prokaryotic membrane lipoprotein lipid attachment site KJA71_23835 PF04610 TrbL/VirB6 plasmid conjugal transfer protein KJA71_23845 PF07996 Type IV secretion system proteins KJA71_23850 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KJA71_23855 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KJA71_23860 PF05101 Type IV secretory pathway, VirB3-like protein KJA71_23865 PF04956 TrbC/VIRB2 family KJA71_23870 PF01751 Toprim domain KJA71_23870 PF01131 DNA topoisomerase KJA71_23870 PF01396 Topoisomerase DNA binding C4 zinc finger KJA71_23875 PF01464 Transglycosylase SLT domain KJA71_23925 PF02661 Fic/DOC family KJA71_23925 PF17841 BID domain of Bartonella effector protein (Bep) KJA71_23935 PF02796 Helix-turn-helix domain of resolvase KJA71_23935 PF00239 Resolvase, N terminal domain KJA71_23955 PF02810 SEC-C motif KJA71_23955 PF03695 Uncharacterised protein family (UPF0149) KJA71_24020 PF13406 Transglycosylase SLT domain KJA71_24025 PF13700 Domain of unknown function (DUF4158) KJA71_24025 PF01526 Tn3 transposase DDE domain KJA71_24045 PF03377 TAL effector repeat KJA71_24065 PF07015 VirC1 protein KJA71_24125 PF18272 single-stranded DNA binding TraI N-terminal subdomain KJA71_24125 PF08751 TrwC relaxase KJA71_24125 PF18340 DNA relaxase TraI 2B/2B-like domain KJA71_24125 PF07057 DNA helicase TraI KJA71_24125 PF18340 DNA relaxase TraI 2B/2B-like domain KJA71_24125 PF08751 TrwC relaxase KJA71_24125 PF07057 DNA helicase TraI KJA71_24125 PF18272 single-stranded DNA binding TraI N-terminal subdomain KJA71_24150 PF01464 Transglycosylase SLT domain KJA71_24155 PF00437 Type II/IV secretion system protein KJA71_24160 PF03743 Bacterial conjugation TrbI-like protein KJA71_24165 PF03524 Conjugal transfer protein KJA71_24235 PF08535 KorB domain KJA71_24235 PF06613 KorB C-terminal beta-barrel domain KJA71_24235 PF02195 ParB-like nuclease domain KJA71_24240 PF13614 AAA domain KJA71_24265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KJA71_24270 PF02796 Helix-turn-helix domain of resolvase KJA71_24270 PF00239 Resolvase, N terminal domain KJA71_24280 PF03377 TAL effector repeat KJA71_24290 PF02810 SEC-C motif KJA71_24290 PF03695 Uncharacterised protein family (UPF0149) KJA71_24310 PF02796 Helix-turn-helix domain of resolvase KJA71_24310 PF00239 Resolvase, N terminal domain