BJD09_00080	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_00110	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_00140	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_00150	PWY-2722	trehalose degradation IV
BJD09_00150	PWY-2723	trehalose degradation V
BJD09_00150	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_00150	PWY-5661	GDP-glucose biosynthesis
BJD09_00150	PWY-621	sucrose degradation III (sucrose invertase)
BJD09_00150	PWY-7238	sucrose biosynthesis II
BJD09_00150	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_00225	PWY-7094	fatty acid salvage
BJD09_00225	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
BJD09_00260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_00260	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_00260	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_00260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_00300	PWY-801	L-homocysteine and L-cysteine interconversion
BJD09_00445	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BJD09_00445	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BJD09_00445	PWY-7766	BJD09_00445
BJD09_00455	PWY-6164	3-dehydroquinate biosynthesis I
BJD09_00460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_00465	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BJD09_00465	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD09_00630	PWY-7533	gliotoxin biosynthesis
BJD09_00715	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD09_00715	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD09_00730	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_00730	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_00730	PWY-7953	BJD09_00730
BJD09_00750	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD09_00750	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BJD09_00760	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD09_00760	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD09_00760	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD09_00865	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BJD09_00925	PWY-3341	L-proline biosynthesis III
BJD09_00925	PWY-4981	L-proline biosynthesis II (from arginine)
BJD09_00925	PWY-6344	L-ornithine degradation II (Stickland reaction)
BJD09_00930	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD09_00975	PWY-5686	UMP biosynthesis
BJD09_00975	PWY-7790	BJD09_00975
BJD09_00975	PWY-7791	BJD09_00975
BJD09_01000	PWY-2941	L-lysine biosynthesis II
BJD09_01000	PWY-2942	L-lysine biosynthesis III
BJD09_01000	PWY-5097	L-lysine biosynthesis VI
BJD09_01000	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
BJD09_01000	PWY-6559	spermidine biosynthesis II
BJD09_01000	PWY-6562	norspermidine biosynthesis
BJD09_01000	PWY-7153	grixazone biosynthesis
BJD09_01000	PWY-7977	BJD09_01000
BJD09_01015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_01015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_01145	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD09_01145	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_01285	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD09_01660	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_01660	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BJD09_01660	PWY-7761	BJD09_01660
BJD09_01760	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BJD09_01760	PWY-5491	diethylphosphate degradation
BJD09_01935	PWY-5669	phosphatidylethanolamine biosynthesis I
BJD09_01950	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_01960	PWY-2941	L-lysine biosynthesis II
BJD09_01960	PWY-2942	L-lysine biosynthesis III
BJD09_01960	PWY-5097	L-lysine biosynthesis VI
BJD09_01960	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_01960	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
BJD09_01960	PWY-6559	spermidine biosynthesis II
BJD09_01960	PWY-6562	norspermidine biosynthesis
BJD09_01960	PWY-7153	grixazone biosynthesis
BJD09_01960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_01960	PWY-7977	BJD09_01960
BJD09_02010	PWY-4381	fatty acid biosynthesis initiation I
BJD09_02010	PWY-5743	3-hydroxypropanoate cycle
BJD09_02010	PWY-5744	glyoxylate assimilation
BJD09_02010	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_02010	PWY-6722	candicidin biosynthesis
BJD09_02015	PWY-6749	CMP-legionaminate biosynthesis I
BJD09_02050	PWY-1042	glycolysis IV (plant cytosol)
BJD09_02050	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_02050	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_02050	PWY-7003	glycerol degradation to butanol
BJD09_02180	PWY-5316	nicotine biosynthesis
BJD09_02180	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_02180	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BJD09_02180	PWY-7342	superpathway of nicotine biosynthesis
BJD09_02190	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD09_02190	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD09_02200	PWY-6854	ethylene biosynthesis III (microbes)
BJD09_02230	PWY-6617	adenosine nucleotides degradation III
BJD09_02230	PWY-7569	arginomycin biosynthesis
BJD09_02230	PWY-7570	blasticidin S biosynthesis
BJD09_02645	PWY-5941	glycogen degradation II (eukaryotic)
BJD09_02645	PWY-6724	starch degradation II
BJD09_02645	PWY-6737	starch degradation V
BJD09_02645	PWY-7238	sucrose biosynthesis II
BJD09_02720	PWY-6655	xanthan biosynthesis
BJD09_02720	PWY-6658	acetan biosynthesis
BJD09_02780	PWY-4381	fatty acid biosynthesis initiation I
BJD09_02795	PWY-5129	sphingolipid biosynthesis (plants)
BJD09_02795	PWY-7836	BJD09_02795
BJD09_02795	PWY-7838	BJD09_02795
BJD09_02795	PWY-7839	BJD09_02795
BJD09_02795	PWY-7841	BJD09_02795
BJD09_02805	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_02805	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_02805	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_02805	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_02810	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD09_02810	PWY-6892	thiazole biosynthesis I (E. coli)
BJD09_02810	PWY-7560	methylerythritol phosphate pathway II
BJD09_02950	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_03030	PWY-7851	BJD09_03030
BJD09_03050	PWY-4041	&gamma;-glutamyl cycle
BJD09_03050	PWY-4061	glutathione-mediated detoxification I
BJD09_03050	PWY-5826	hypoglycin biosynthesis
BJD09_03050	PWY-6842	glutathione-mediated detoxification II
BJD09_03050	PWY-7112	4-hydroxy-2-nonenal detoxification
BJD09_03050	PWY-7559	glutathione degradation (DUG pathway - yeast)
BJD09_03055	PWY-6788	cellulose degradation II (fungi)
BJD09_03060	PWY-7183	pyrimidine nucleobases salvage I
BJD09_03070	PWY-4702	phytate degradation I
BJD09_03095	PWY-6700	queuosine biosynthesis
BJD09_03100	PWY-6700	queuosine biosynthesis
BJD09_03195	PWY-5022	4-aminobutanoate degradation V
BJD09_03195	PWY-6728	methylaspartate cycle
BJD09_03195	PWY-7126	ethylene biosynthesis IV
BJD09_03285	PWY-381	nitrate reduction II (assimilatory)
BJD09_03285	PWY-5675	nitrate reduction V (assimilatory)
BJD09_03285	PWY-6549	L-glutamine biosynthesis III
BJD09_03285	PWY-6963	ammonia assimilation cycle I
BJD09_03285	PWY-6964	ammonia assimilation cycle II
BJD09_03295	PWY-381	nitrate reduction II (assimilatory)
BJD09_03295	PWY-5675	nitrate reduction V (assimilatory)
BJD09_03295	PWY-6549	L-glutamine biosynthesis III
BJD09_03295	PWY-6963	ammonia assimilation cycle I
BJD09_03295	PWY-6964	ammonia assimilation cycle II
BJD09_03405	PWY-3781	aerobic respiration I (cytochrome c)
BJD09_03405	PWY-6692	Fe(II) oxidation
BJD09_03405	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
BJD09_03405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD09_03660	PWY-6700	queuosine biosynthesis
BJD09_03665	PWY-6938	NADH repair
BJD09_03705	PWY-5676	acetyl-CoA fermentation to butanoate II
BJD09_03705	PWY-5741	ethylmalonyl-CoA pathway
BJD09_03705	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD09_03705	PWY-7948	BJD09_03705
BJD09_03755	PWY-6605	adenine and adenosine salvage II
BJD09_03755	PWY-6610	adenine and adenosine salvage IV
BJD09_03755	PWY-7805	BJD09_03755
BJD09_03755	PWY-7807	BJD09_03755
BJD09_03790	PWY-2301	<i>myo</i>-inositol biosynthesis
BJD09_03790	PWY-4702	phytate degradation I
BJD09_03790	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
BJD09_03830	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
BJD09_03830	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
BJD09_03830	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
BJD09_03830	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
BJD09_03830	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
BJD09_03830	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
BJD09_03830	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
BJD09_03830	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
BJD09_03830	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BJD09_03830	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
BJD09_03835	PWY-181	photorespiration
BJD09_03925	PWY-5686	UMP biosynthesis
BJD09_03925	PWY-7790	BJD09_03925
BJD09_03925	PWY-7791	BJD09_03925
BJD09_03960	PWY-5686	UMP biosynthesis
BJD09_03960	PWY-7790	BJD09_03960
BJD09_03960	PWY-7791	BJD09_03960
BJD09_03965	PWY-4983	L-citrulline-nitric oxide cycle
BJD09_03965	PWY-4984	urea cycle
BJD09_03965	PWY-5	canavanine biosynthesis
BJD09_03965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_03965	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_03980	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_03980	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_03990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_03990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_03995	PWY-4983	L-citrulline-nitric oxide cycle
BJD09_03995	PWY-4984	urea cycle
BJD09_03995	PWY-5	canavanine biosynthesis
BJD09_03995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_03995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_04010	PWY-3341	L-proline biosynthesis III
BJD09_04010	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD09_04035	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
BJD09_04125	PWY-7942	BJD09_04125
BJD09_04190	PWY-5941	glycogen degradation II (eukaryotic)
BJD09_04190	PWY-6724	starch degradation II
BJD09_04190	PWY-6737	starch degradation V
BJD09_04190	PWY-7238	sucrose biosynthesis II
BJD09_04215	PWY-43	putrescine biosynthesis II
BJD09_04235	PWY-7205	CMP phosphorylation
BJD09_04260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_04260	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_04260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_04270	PWY-3801	sucrose degradation II (sucrose synthase)
BJD09_04270	PWY-6527	stachyose degradation
BJD09_04270	PWY-7238	sucrose biosynthesis II
BJD09_04270	PWY-7343	UDP-glucose biosynthesis
BJD09_04270	PWY-7817	BJD09_04270
BJD09_04285	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BJD09_04285	PWY-2201	folate transformations I
BJD09_04285	PWY-3841	folate transformations II
BJD09_04285	PWY-5030	L-histidine degradation III
BJD09_04285	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD09_04285	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BJD09_04285	PWY-7909	BJD09_04285
BJD09_04290	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD09_04290	PWY-6596	adenosine nucleotides degradation I
BJD09_04290	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_04295	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_04970	PWY-5194	siroheme biosynthesis
BJD09_04970	PWY-5196	factor 430 biosynthesis
BJD09_04970	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BJD09_05255	PWY-7158	L-phenylalanine degradation V
BJD09_05350	PWY-6012	acyl carrier protein metabolism I
BJD09_05350	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BJD09_05350	PWY-6289	petrobactin biosynthesis
BJD09_05380	PWY-5269	cardiolipin biosynthesis II
BJD09_05380	PWY-5668	cardiolipin biosynthesis I
BJD09_05380	PWY-7817	BJD09_05380
BJD09_05400	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD09_05455	PWY-3781	aerobic respiration I (cytochrome c)
BJD09_05455	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BJD09_05455	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD09_05455	PWY-5690	TCA cycle II (plants and fungi)
BJD09_05455	PWY-6728	methylaspartate cycle
BJD09_05455	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_05455	PWY-7254	TCA cycle VII (acetate-producers)
BJD09_05455	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD09_05465	PWY-3781	aerobic respiration I (cytochrome c)
BJD09_05465	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BJD09_05465	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD09_05465	PWY-5690	TCA cycle II (plants and fungi)
BJD09_05465	PWY-6728	methylaspartate cycle
BJD09_05465	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_05465	PWY-7254	TCA cycle VII (acetate-producers)
BJD09_05465	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD09_05495	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD09_05500	PWY-2722	trehalose degradation IV
BJD09_05500	PWY-2723	trehalose degradation V
BJD09_05500	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_05500	PWY-5661	GDP-glucose biosynthesis
BJD09_05500	PWY-621	sucrose degradation III (sucrose invertase)
BJD09_05500	PWY-7238	sucrose biosynthesis II
BJD09_05500	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_05505	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_05505	PWY-6855	chitin degradation I (archaea)
BJD09_05505	PWY-6906	chitin derivatives degradation
BJD09_05510	PWY-5101	L-isoleucine biosynthesis II
BJD09_05510	PWY-5103	L-isoleucine biosynthesis III
BJD09_05510	PWY-5104	L-isoleucine biosynthesis IV
BJD09_05510	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_05515	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD09_05515	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD09_05515	PWY-7242	D-fructuronate degradation
BJD09_05515	PWY-7310	D-glucosaminate degradation
BJD09_05515	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD09_05645	PWY-6502	oxidized GTP and dGTP detoxification
BJD09_05660	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_05660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_05700	PWY-5964	guanylyl molybdenum cofactor biosynthesis
BJD09_05700	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
BJD09_05705	PWY-6823	molybdenum cofactor biosynthesis
BJD09_05760	PWY-6823	molybdenum cofactor biosynthesis
BJD09_05795	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD09_05795	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BJD09_05795	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_05795	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_05795	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BJD09_05795	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD09_05795	PWY-7205	CMP phosphorylation
BJD09_05795	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD09_05795	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_05795	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_05795	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_05795	PWY-7224	purine deoxyribonucleosides salvage
BJD09_05795	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_05795	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD09_05805	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD09_05805	PWY-5109	2-methylbutanoate biosynthesis
BJD09_05805	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BJD09_05805	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BJD09_05805	PWY-5177	glutaryl-CoA degradation
BJD09_05805	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_05805	PWY-6435	4-hydroxybenzoate biosynthesis V
BJD09_05805	PWY-6583	pyruvate fermentation to butanol I
BJD09_05805	PWY-6863	pyruvate fermentation to hexanol
BJD09_05805	PWY-6883	pyruvate fermentation to butanol II
BJD09_05805	PWY-6944	androstenedione degradation
BJD09_05805	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD09_05805	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD09_05805	PWY-7007	methyl ketone biosynthesis
BJD09_05805	PWY-7046	4-coumarate degradation (anaerobic)
BJD09_05805	PWY-7094	fatty acid salvage
BJD09_05805	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD09_05805	PWY-735	jasmonic acid biosynthesis
BJD09_05805	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BJD09_05805	PWY-7606	docosahexaenoate biosynthesis III (mammals)
BJD09_05805	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
BJD09_05805	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
BJD09_05805	PWY-7726	BJD09_05805
BJD09_05805	PWY-7778	BJD09_05805
BJD09_05805	PWY-7779	BJD09_05805
BJD09_05860	PWY-7801	BJD09_05860
BJD09_05885	PWY-7887	BJD09_05885
BJD09_05885	PWY-7892	BJD09_05885
BJD09_06060	PWY-4381	fatty acid biosynthesis initiation I
BJD09_06120	PWY-7980	BJD09_06120
BJD09_06250	PWY-6823	molybdenum cofactor biosynthesis
BJD09_06530	PWY-5747	2-methylcitrate cycle II
BJD09_06625	PWY-7805	BJD09_06625
BJD09_06625	PWY-7807	BJD09_06625
BJD09_06640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_06640	PWY-5686	UMP biosynthesis
BJD09_06640	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_06640	PWY-7790	BJD09_06640
BJD09_06640	PWY-7791	BJD09_06640
BJD09_06650	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD09_06650	PWY-5686	UMP biosynthesis
BJD09_06650	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD09_06650	PWY-7790	BJD09_06650
BJD09_06650	PWY-7791	BJD09_06650
BJD09_06655	PWY-2941	L-lysine biosynthesis II
BJD09_06655	PWY-2942	L-lysine biosynthesis III
BJD09_06655	PWY-5097	L-lysine biosynthesis VI
BJD09_06755	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD09_06760	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD09_06760	PWY-5389	3-methylthiopropanoate biosynthesis
BJD09_06850	PWY-702	L-methionine biosynthesis II
BJD09_06855	PWY-2941	L-lysine biosynthesis II
BJD09_06855	PWY-2942	L-lysine biosynthesis III
BJD09_06855	PWY-5097	L-lysine biosynthesis VI
BJD09_06855	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
BJD09_06855	PWY-6559	spermidine biosynthesis II
BJD09_06855	PWY-6562	norspermidine biosynthesis
BJD09_06855	PWY-7153	grixazone biosynthesis
BJD09_06855	PWY-7977	BJD09_06855
BJD09_06945	PWY-5686	UMP biosynthesis
BJD09_06950	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_06950	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_06950	PWY-7953	BJD09_06950
BJD09_06960	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_06960	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_07050	PWY-3801	sucrose degradation II (sucrose synthase)
BJD09_07050	PWY-5054	sorbitol biosynthesis I
BJD09_07050	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BJD09_07050	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_07050	PWY-5659	GDP-mannose biosynthesis
BJD09_07050	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_07050	PWY-621	sucrose degradation III (sucrose invertase)
BJD09_07050	PWY-622	starch biosynthesis
BJD09_07050	PWY-6981	chitin biosynthesis
BJD09_07050	PWY-6992	1,5-anhydrofructose degradation
BJD09_07050	PWY-7238	sucrose biosynthesis II
BJD09_07050	PWY-7347	sucrose biosynthesis III
BJD09_07050	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_07055	PWY-5155	&beta;-alanine biosynthesis III
BJD09_07065	PWY-6654	phosphopantothenate biosynthesis III
BJD09_07070	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD09_07070	PWY-6148	tetrahydromethanopterin biosynthesis
BJD09_07070	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD09_07070	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD09_07070	PWY-7852	BJD09_07070
BJD09_07070	PWY-7853	BJD09_07070
BJD09_07085	PWY-5663	tetrahydrobiopterin biosynthesis I
BJD09_07085	PWY-5664	tetrahydrobiopterin biosynthesis II
BJD09_07085	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD09_07085	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD09_07085	PWY-6983	tetrahydrobiopterin biosynthesis III
BJD09_07085	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BJD09_07085	PWY-7852	BJD09_07085
BJD09_07120	PWY-4261	glycerol degradation I
BJD09_07125	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_07135	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_07140	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_07170	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD09_07170	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD09_07170	PWY-7242	D-fructuronate degradation
BJD09_07170	PWY-7310	D-glucosaminate degradation
BJD09_07170	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD09_07185	PWY-7130	L-glucose degradation
BJD09_07200	PWY-2941	L-lysine biosynthesis II
BJD09_07200	PWY-2942	L-lysine biosynthesis III
BJD09_07200	PWY-5097	L-lysine biosynthesis VI
BJD09_07235	PWY-6910	hydroxymethylpyrimidine salvage
BJD09_07235	PWY-7356	thiamin salvage IV (yeast)
BJD09_07235	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD09_07335	PWY-2781	<i>cis</i>-zeatin biosynthesis
BJD09_07340	PWY-6614	tetrahydrofolate biosynthesis
BJD09_07380	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_07380	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD09_07380	PWY-6596	adenosine nucleotides degradation I
BJD09_07380	PWY-6606	guanosine nucleotides degradation II
BJD09_07380	PWY-6607	guanosine nucleotides degradation I
BJD09_07380	PWY-6608	guanosine nucleotides degradation III
BJD09_07380	PWY-7185	UTP and CTP dephosphorylation I
BJD09_07380	PWY-7821	BJD09_07380
BJD09_07395	PWY-7560	methylerythritol phosphate pathway II
BJD09_07400	PWY-7560	methylerythritol phosphate pathway II
BJD09_07410	PWY-1042	glycolysis IV (plant cytosol)
BJD09_07410	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD09_07410	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD09_07410	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_07410	PWY-5723	Rubisco shunt
BJD09_07410	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_07410	PWY-6886	1-butanol autotrophic biosynthesis
BJD09_07410	PWY-6901	superpathway of glucose and xylose degradation
BJD09_07410	PWY-7003	glycerol degradation to butanol
BJD09_07410	PWY-7124	ethylene biosynthesis V (engineered)
BJD09_07410	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD09_07420	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD09_07420	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD09_07425	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BJD09_07425	PWY-7177	UTP and CTP dephosphorylation II
BJD09_07425	PWY-7185	UTP and CTP dephosphorylation I
BJD09_07565	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_07565	PWY-6578	8-amino-7-oxononanoate biosynthesis III
BJD09_07565	PWY-7147	8-amino-7-oxononanoate biosynthesis II
BJD09_07580	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD09_07580	PWY-7688	BJD09_07580
BJD09_07770	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BJD09_07785	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_07790	PWY-3461	L-tyrosine biosynthesis II
BJD09_07790	PWY-3462	L-phenylalanine biosynthesis II
BJD09_07790	PWY-6120	L-tyrosine biosynthesis III
BJD09_07790	PWY-6627	salinosporamide A biosynthesis
BJD09_07790	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BJD09_07790	PWY-7626	bacilysin biosynthesis
BJD09_07850	PWY-5028	L-histidine degradation II
BJD09_07850	PWY-5030	L-histidine degradation III
BJD09_07855	PWY-5028	L-histidine degradation II
BJD09_07855	PWY-5030	L-histidine degradation III
BJD09_07865	PWY-5028	L-histidine degradation II
BJD09_07865	PWY-5030	L-histidine degradation III
BJD09_07890	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD09_07890	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BJD09_08045	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD09_08045	PWY-5743	3-hydroxypropanoate cycle
BJD09_08045	PWY-5744	glyoxylate assimilation
BJD09_08045	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_08045	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_08045	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_08045	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_08050	PWY-5647	2-nitrobenzoate degradation I
BJD09_08050	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD09_08050	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD09_08050	PWY-6505	L-tryptophan degradation XII (Geobacillus)
BJD09_08060	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD09_08060	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD09_08065	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD09_08065	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD09_08065	PWY-7717	BJD09_08065
BJD09_08065	PWY-7765	BJD09_08065
BJD09_08095	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_08095	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD09_08095	PWY-6596	adenosine nucleotides degradation I
BJD09_08095	PWY-6606	guanosine nucleotides degradation II
BJD09_08095	PWY-6607	guanosine nucleotides degradation I
BJD09_08095	PWY-6608	guanosine nucleotides degradation III
BJD09_08095	PWY-7185	UTP and CTP dephosphorylation I
BJD09_08095	PWY-7821	BJD09_08095
BJD09_08100	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BJD09_08100	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD09_08100	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BJD09_08180	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD09_08180	PWY-5743	3-hydroxypropanoate cycle
BJD09_08180	PWY-5744	glyoxylate assimilation
BJD09_08180	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_08180	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_08180	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_08180	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_08245	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_08300	PWY-2201	folate transformations I
BJD09_08300	PWY-3841	folate transformations II
BJD09_08300	PWY-7977	BJD09_08300
BJD09_08340	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BJD09_08340	PWY-7820	BJD09_08340
BJD09_08390	PWY-5392	reductive TCA cycle II
BJD09_08390	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD09_08390	PWY-5690	TCA cycle II (plants and fungi)
BJD09_08390	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_08390	PWY-6728	methylaspartate cycle
BJD09_08390	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_08390	PWY-7254	TCA cycle VII (acetate-producers)
BJD09_08390	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD09_08405	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD09_08405	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD09_08405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_08405	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD09_08425	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD09_08430	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD09_08435	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BJD09_08435	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD09_08480	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
BJD09_08485	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BJD09_08485	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD09_08815	PWY-6803	phosphatidylcholine acyl editing
BJD09_08815	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
BJD09_08815	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
BJD09_08815	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BJD09_08815	PWY-7783	BJD09_08815
BJD09_08820	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD09_08820	PWY-5743	3-hydroxypropanoate cycle
BJD09_08820	PWY-5744	glyoxylate assimilation
BJD09_08820	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_08820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_08820	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_08820	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_08830	PWY-5392	reductive TCA cycle II
BJD09_08830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD09_08830	PWY-5690	TCA cycle II (plants and fungi)
BJD09_08830	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_08830	PWY-6728	methylaspartate cycle
BJD09_08830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_08830	PWY-7254	TCA cycle VII (acetate-producers)
BJD09_08830	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD09_08995	PWY-7799	BJD09_08995
BJD09_08995	PWY-7800	BJD09_08995
BJD09_09060	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD09_09060	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD09_09060	PWY-7817	BJD09_09060
BJD09_09065	PWY-7560	methylerythritol phosphate pathway II
BJD09_09090	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD09_09090	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD09_09090	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD09_09090	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD09_09090	PWY-6113	superpathway of mycolate biosynthesis
BJD09_09090	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD09_09090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_09090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD09_09090	PWY-7663	gondoate biosynthesis (anaerobic)
BJD09_09090	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD09_09090	PWY-7858	BJD09_09090
BJD09_09090	PWYG-321	mycolate biosynthesis
BJD09_09115	PWY-4381	fatty acid biosynthesis initiation I
BJD09_09115	PWY-5743	3-hydroxypropanoate cycle
BJD09_09115	PWY-5744	glyoxylate assimilation
BJD09_09115	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_09115	PWY-6722	candicidin biosynthesis
BJD09_09495	PWY-6902	chitin degradation II
BJD09_09495	PWY-7822	BJD09_09495
BJD09_09495	PWY-7883	BJD09_09495
BJD09_09575	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD09_09575	PWY-5109	2-methylbutanoate biosynthesis
BJD09_09575	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BJD09_09575	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BJD09_09575	PWY-5177	glutaryl-CoA degradation
BJD09_09575	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_09575	PWY-6435	4-hydroxybenzoate biosynthesis V
BJD09_09575	PWY-6583	pyruvate fermentation to butanol I
BJD09_09575	PWY-6863	pyruvate fermentation to hexanol
BJD09_09575	PWY-6883	pyruvate fermentation to butanol II
BJD09_09575	PWY-6944	androstenedione degradation
BJD09_09575	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD09_09575	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD09_09575	PWY-7007	methyl ketone biosynthesis
BJD09_09575	PWY-7046	4-coumarate degradation (anaerobic)
BJD09_09575	PWY-7094	fatty acid salvage
BJD09_09575	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD09_09575	PWY-735	jasmonic acid biosynthesis
BJD09_09575	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BJD09_09575	PWY-7606	docosahexaenoate biosynthesis III (mammals)
BJD09_09575	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
BJD09_09575	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
BJD09_09575	PWY-7726	BJD09_09575
BJD09_09575	PWY-7778	BJD09_09575
BJD09_09575	PWY-7779	BJD09_09575
BJD09_09605	PWY-5642	2,4-dinitrotoluene degradation
BJD09_09625	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_09635	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_09680	PWY-5506	methanol oxidation to formaldehyde IV
BJD09_09715	PWY-6829	tRNA methylation (yeast)
BJD09_09715	PWY-7285	methylwyosine biosynthesis
BJD09_09715	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BJD09_09735	PWY-723	alkylnitronates degradation
BJD09_09750	PWY-6317	galactose degradation I (Leloir pathway)
BJD09_09895	PWY-3781	aerobic respiration I (cytochrome c)
BJD09_09895	PWY-4521	arsenite oxidation I (respiratory)
BJD09_09895	PWY-6692	Fe(II) oxidation
BJD09_09895	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD09_09895	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
BJD09_09910	PWY-7560	methylerythritol phosphate pathway II
BJD09_09915	PWY-7884	BJD09_09915
BJD09_09925	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BJD09_09925	PWY-6167	flavin biosynthesis II (archaea)
BJD09_09925	PWY-6168	flavin biosynthesis III (fungi)
BJD09_09925	PWY-7863	BJD09_09925
BJD09_09995	PWY-7802	BJD09_09995
BJD09_10440	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_10490	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_10490	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_10490	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_10490	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_10555	PWY-5747	2-methylcitrate cycle II
BJD09_10590	PWY-5958	acridone alkaloid biosynthesis
BJD09_10590	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD09_10590	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD09_10605	PWY-5367	petroselinate biosynthesis
BJD09_10605	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD09_10605	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD09_10605	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD09_10605	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD09_10605	PWY-6113	superpathway of mycolate biosynthesis
BJD09_10605	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD09_10605	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_10605	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD09_10605	PWY-7663	gondoate biosynthesis (anaerobic)
BJD09_10605	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD09_10605	PWY-7858	BJD09_10605
BJD09_10605	PWYG-321	mycolate biosynthesis
BJD09_10610	PWY-4381	fatty acid biosynthesis initiation I
BJD09_10610	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BJD09_10610	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD09_10620	PWY-4381	fatty acid biosynthesis initiation I
BJD09_10745	PWY-6823	molybdenum cofactor biosynthesis
BJD09_10745	PWY-7887	BJD09_10745
BJD09_10755	PWY-6823	molybdenum cofactor biosynthesis
BJD09_10765	PWY-6823	molybdenum cofactor biosynthesis
BJD09_10775	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
BJD09_10775	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
BJD09_10815	PWY-5386	methylglyoxal degradation I
BJD09_11095	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD09_11095	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD09_11095	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD09_11095	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD09_11110	PWY-2161	folate polyglutamylation
BJD09_11130	PWY-7782	BJD09_11130
BJD09_11130	PWY-7783	BJD09_11130
BJD09_11145	PWY-7378	aminopropanol phosphate biosynthesis II
BJD09_11230	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD09_11230	PWY-5392	reductive TCA cycle II
BJD09_11230	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD09_11230	PWY-5690	TCA cycle II (plants and fungi)
BJD09_11230	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_11230	PWY-6728	methylaspartate cycle
BJD09_11230	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_11230	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_11230	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD09_11250	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BJD09_11260	PWY-6164	3-dehydroquinate biosynthesis I
BJD09_11510	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
BJD09_11530	PWY-7560	methylerythritol phosphate pathway II
BJD09_11590	PWY-7731	BJD09_11590
BJD09_11630	PWY-5057	L-valine degradation II
BJD09_11630	PWY-5076	L-leucine degradation III
BJD09_11630	PWY-5078	L-isoleucine degradation II
BJD09_11630	PWY-5101	L-isoleucine biosynthesis II
BJD09_11630	PWY-5103	L-isoleucine biosynthesis III
BJD09_11630	PWY-5104	L-isoleucine biosynthesis IV
BJD09_11630	PWY-5108	L-isoleucine biosynthesis V
BJD09_11630	PWY-7767	BJD09_11630
BJD09_11750	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_11750	PWY-5723	Rubisco shunt
BJD09_11765	PWY-2582	brassinosteroid biosynthesis II
BJD09_11765	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD09_11765	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD09_11765	PWY-6948	sitosterol degradation to androstenedione
BJD09_11765	PWY-699	brassinosteroid biosynthesis I
BJD09_11765	PWY-7299	progesterone biosynthesis
BJD09_11840	PWY-5530	sorbitol biosynthesis II
BJD09_12060	PWY-3841	folate transformations II
BJD09_12060	PWY-6614	tetrahydrofolate biosynthesis
BJD09_12070	PWY-3841	folate transformations II
BJD09_12070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_12070	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_12070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD09_12070	PWY-7199	pyrimidine deoxyribonucleosides salvage
BJD09_12070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD09_12095	PWY-7039	phosphatidate metabolism, as a signaling molecule
BJD09_12095	PWY-7817	BJD09_12095
BJD09_12215	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD09_12215	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BJD09_12260	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD09_12260	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD09_12260	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_12260	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_12260	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
BJD09_12260	PWY-6549	L-glutamine biosynthesis III
BJD09_12260	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_12260	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_12260	PWY-7124	ethylene biosynthesis V (engineered)
BJD09_12275	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD09_12360	PWY-2201	folate transformations I
BJD09_12360	PWY-3841	folate transformations II
BJD09_12370	PWY-6502	oxidized GTP and dGTP detoxification
BJD09_12370	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD09_12370	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD09_12370	PWY-6897	thiamin salvage II
BJD09_12370	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BJD09_12370	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BJD09_12370	PWY-7356	thiamin salvage IV (yeast)
BJD09_12370	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD09_12410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_12410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_12410	PWY-7953	BJD09_12410
BJD09_12415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_12415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_12415	PWY-7953	BJD09_12415
BJD09_12420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_12420	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_12420	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_12420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_12425	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_12425	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_12425	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_12425	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_12430	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_12430	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_12430	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_12435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_12435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_12435	PWY-7953	BJD09_12435
BJD09_12445	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_12445	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_12560	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD09_12560	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD09_12560	PWY-6896	thiamin salvage I
BJD09_12560	PWY-6897	thiamin salvage II
BJD09_12570	PWY-6167	flavin biosynthesis II (archaea)
BJD09_12570	PWY-6168	flavin biosynthesis III (fungi)
BJD09_12575	PWY-6167	flavin biosynthesis II (archaea)
BJD09_12575	PWY-6168	flavin biosynthesis III (fungi)
BJD09_12575	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD09_12575	PWY-7991	BJD09_12575
BJD09_12580	PWY-6167	flavin biosynthesis II (archaea)
BJD09_12580	PWY-6168	flavin biosynthesis III (fungi)
BJD09_12580	PWY-7980	BJD09_12580
BJD09_12590	PWY-7991	BJD09_12590
BJD09_12605	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD09_12605	PWY-181	photorespiration
BJD09_12605	PWY-2161	folate polyglutamylation
BJD09_12605	PWY-2201	folate transformations I
BJD09_12605	PWY-3661	glycine betaine degradation I
BJD09_12605	PWY-3661-1	glycine betaine degradation II (mammalian)
BJD09_12605	PWY-3841	folate transformations II
BJD09_12605	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD09_12645	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_12650	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_12655	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_12655	PWY-3162	L-tryptophan degradation V (side chain pathway)
BJD09_12655	PWY-5057	L-valine degradation II
BJD09_12655	PWY-5076	L-leucine degradation III
BJD09_12655	PWY-5078	L-isoleucine degradation II
BJD09_12655	PWY-5079	L-phenylalanine degradation III
BJD09_12655	PWY-5082	L-methionine degradation III
BJD09_12655	PWY-5480	pyruvate fermentation to ethanol I
BJD09_12655	PWY-5486	pyruvate fermentation to ethanol II
BJD09_12655	PWY-5751	phenylethanol biosynthesis
BJD09_12655	PWY-6313	serotonin degradation
BJD09_12655	PWY-6333	acetaldehyde biosynthesis I
BJD09_12655	PWY-6342	noradrenaline and adrenaline degradation
BJD09_12655	PWY-6587	pyruvate fermentation to ethanol III
BJD09_12655	PWY-6802	salidroside biosynthesis
BJD09_12655	PWY-6871	3-methylbutanol biosynthesis
BJD09_12655	PWY-7013	L-1,2-propanediol degradation
BJD09_12655	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_12655	PWY-7118	chitin degradation to ethanol
BJD09_12655	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD09_12655	PWY-7798	BJD09_12655
BJD09_12685	PWY-6840	homoglutathione biosynthesis
BJD09_12685	PWY-7255	ergothioneine biosynthesis I (bacteria)
BJD09_12740	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BJD09_12740	PWY-7494	choline degradation IV
BJD09_12745	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BJD09_12745	PWY-7494	choline degradation IV
BJD09_12760	PWY-6906	chitin derivatives degradation
BJD09_12760	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BJD09_12760	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BJD09_12905	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD09_12905	PWY-6148	tetrahydromethanopterin biosynthesis
BJD09_12905	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD09_12905	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD09_12905	PWY-7852	BJD09_12905
BJD09_12905	PWY-7853	BJD09_12905
BJD09_12965	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_12995	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BJD09_12995	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BJD09_13000	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BJD09_13000	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BJD09_13015	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_13015	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_13040	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_13040	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_13040	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_13040	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_13045	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_13045	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_13080	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_13080	PWY-3162	L-tryptophan degradation V (side chain pathway)
BJD09_13080	PWY-5057	L-valine degradation II
BJD09_13080	PWY-5076	L-leucine degradation III
BJD09_13080	PWY-5078	L-isoleucine degradation II
BJD09_13080	PWY-5079	L-phenylalanine degradation III
BJD09_13080	PWY-5082	L-methionine degradation III
BJD09_13080	PWY-5480	pyruvate fermentation to ethanol I
BJD09_13080	PWY-5486	pyruvate fermentation to ethanol II
BJD09_13080	PWY-5751	phenylethanol biosynthesis
BJD09_13080	PWY-6313	serotonin degradation
BJD09_13080	PWY-6333	acetaldehyde biosynthesis I
BJD09_13080	PWY-6342	noradrenaline and adrenaline degradation
BJD09_13080	PWY-6587	pyruvate fermentation to ethanol III
BJD09_13080	PWY-6802	salidroside biosynthesis
BJD09_13080	PWY-6871	3-methylbutanol biosynthesis
BJD09_13080	PWY-7013	L-1,2-propanediol degradation
BJD09_13080	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_13080	PWY-7118	chitin degradation to ethanol
BJD09_13080	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD09_13080	PWY-7798	BJD09_13080
BJD09_13130	PWY-5839	menaquinol-7 biosynthesis
BJD09_13130	PWY-5844	menaquinol-9 biosynthesis
BJD09_13130	PWY-5849	menaquinol-6 biosynthesis
BJD09_13130	PWY-5890	menaquinol-10 biosynthesis
BJD09_13130	PWY-5891	menaquinol-11 biosynthesis
BJD09_13130	PWY-5892	menaquinol-12 biosynthesis
BJD09_13130	PWY-5895	menaquinol-13 biosynthesis
BJD09_13175	PWY-2941	L-lysine biosynthesis II
BJD09_13175	PWY-5097	L-lysine biosynthesis VI
BJD09_13240	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD09_13240	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD09_13390	PWY-7892	BJD09_13390
BJD09_13505	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD09_13505	PWY-6892	thiazole biosynthesis I (E. coli)
BJD09_13505	PWY-7560	methylerythritol phosphate pathway II
BJD09_13560	PWY-5796	malonate decarboxylase activation
BJD09_13565	PWY-5796	malonate decarboxylase activation
BJD09_13570	PWY-6060	malonate degradation II (biotin-dependent)
BJD09_13575	PWY-4381	fatty acid biosynthesis initiation I
BJD09_13575	PWY-5743	3-hydroxypropanoate cycle
BJD09_13575	PWY-5744	glyoxylate assimilation
BJD09_13575	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_13575	PWY-6060	malonate degradation II (biotin-dependent)
BJD09_13575	PWY-6722	candicidin biosynthesis
BJD09_13585	PWY-5794	malonate degradation I (biotin-independent)
BJD09_13585	PWY-6060	malonate degradation II (biotin-dependent)
BJD09_13665	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD09_13665	PWY-6164	3-dehydroquinate biosynthesis I
BJD09_13665	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD09_13740	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_13740	PWY-6416	quinate degradation II
BJD09_13740	PWY-6707	gallate biosynthesis
BJD09_13840	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD09_13840	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD09_13840	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD09_13850	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD09_13850	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD09_13850	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD09_13900	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_13900	PWY-7761	BJD09_13900
BJD09_14000	PWY-6834	spermidine biosynthesis III
BJD09_14030	PWY-5958	acridone alkaloid biosynthesis
BJD09_14030	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD09_14030	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD09_14040	PWY-5958	acridone alkaloid biosynthesis
BJD09_14040	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD09_14040	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD09_14055	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_14055	PWY-5723	Rubisco shunt
BJD09_14070	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD09_14070	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD09_14070	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD09_14090	PWY-6855	chitin degradation I (archaea)
BJD09_14090	PWY-6902	chitin degradation II
BJD09_14090	PWY-7822	BJD09_14090
BJD09_14290	PWY-2661	trehalose biosynthesis V
BJD09_14295	PWY-5941	glycogen degradation II (eukaryotic)
BJD09_14295	PWY-6724	starch degradation II
BJD09_14295	PWY-6737	starch degradation V
BJD09_14295	PWY-7238	sucrose biosynthesis II
BJD09_14300	PWY-2661	trehalose biosynthesis V
BJD09_14305	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD09_14305	PWY-622	starch biosynthesis
BJD09_14305	PWY-7900	BJD09_14305
BJD09_14310	PWY-622	starch biosynthesis
BJD09_14380	PWY-7980	BJD09_14380
BJD09_14505	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BJD09_14510	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_14510	PWY-6578	8-amino-7-oxononanoate biosynthesis III
BJD09_14510	PWY-7147	8-amino-7-oxononanoate biosynthesis II
BJD09_14520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_14530	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_14595	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BJD09_14600	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD09_14600	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD09_14600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_14600	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD09_14605	PWY-6041	4-sulfocatechol degradation
BJD09_14610	PWY-6041	4-sulfocatechol degradation
BJD09_14615	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD09_14615	PWY-2361	3-oxoadipate degradation
BJD09_14615	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BJD09_14645	PWY-4261	glycerol degradation I
BJD09_14645	PWY-6118	glycerol-3-phosphate shuttle
BJD09_14645	PWY-6952	glycerophosphodiester degradation
BJD09_14655	PWY-4261	glycerol degradation I
BJD09_14725	PWY-5101	L-isoleucine biosynthesis II
BJD09_14725	PWY-5103	L-isoleucine biosynthesis III
BJD09_14725	PWY-5104	L-isoleucine biosynthesis IV
BJD09_14725	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_14790	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD09_14790	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BJD09_14790	PWY-6936	seleno-amino acid biosynthesis
BJD09_14790	PWY-702	L-methionine biosynthesis II
BJD09_14810	PWY-6700	queuosine biosynthesis
BJD09_14815	PWY-2201	folate transformations I
BJD09_14815	PWY-3841	folate transformations II
BJD09_14850	PWY-2201	folate transformations I
BJD09_14850	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD09_14850	PWY-7909	BJD09_14850
BJD09_14945	PWY-5169	cyanurate degradation
BJD09_14945	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BJD09_14975	PWY-6832	2-aminoethylphosphonate degradation II
BJD09_14990	PWY-5691	urate degradation to allantoin I
BJD09_14990	PWY-7394	urate degradation to allantoin II
BJD09_14990	PWY-7849	BJD09_14990
BJD09_15000	PWY-5691	urate degradation to allantoin I
BJD09_15000	PWY-7394	urate degradation to allantoin II
BJD09_15000	PWY-7849	BJD09_15000
BJD09_15170	PWY-4381	fatty acid biosynthesis initiation I
BJD09_15170	PWY-5743	3-hydroxypropanoate cycle
BJD09_15170	PWY-5744	glyoxylate assimilation
BJD09_15170	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD09_15170	PWY-6722	candicidin biosynthesis
BJD09_15205	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_15210	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_15210	PWY-7118	chitin degradation to ethanol
BJD09_15210	PWY-7294	xylose degradation IV
BJD09_15210	PWY-7295	L-arabinose degradation IV
BJD09_15210	PWY-7854	BJD09_15210
BJD09_15300	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD09_15300	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD09_15300	PWY-7953	BJD09_15300
BJD09_15340	PWY-4381	fatty acid biosynthesis initiation I
BJD09_15400	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD09_15400	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD09_15400	PWY-7902	BJD09_15400
BJD09_15430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD09_15430	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD09_15465	PWY-6854	ethylene biosynthesis III (microbes)
BJD09_15470	PWY-6854	ethylene biosynthesis III (microbes)
BJD09_15495	PWY-381	nitrate reduction II (assimilatory)
BJD09_15495	PWY-5675	nitrate reduction V (assimilatory)
BJD09_15495	PWY-6549	L-glutamine biosynthesis III
BJD09_15495	PWY-6963	ammonia assimilation cycle I
BJD09_15495	PWY-6964	ammonia assimilation cycle II
BJD09_15505	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
BJD09_15605	PWY-7255	ergothioneine biosynthesis I (bacteria)
BJD09_15605	PWY-7550	ergothioneine biosynthesis II (fungi)
BJD09_15610	PWY-7255	ergothioneine biosynthesis I (bacteria)
BJD09_15665	PWY-6134	L-tyrosine biosynthesis IV
BJD09_15665	PWY-7158	L-phenylalanine degradation V
BJD09_15690	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD09_15690	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD09_15695	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD09_15760	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD09_15760	PWY-622	starch biosynthesis
BJD09_15760	PWY-7900	BJD09_15760
BJD09_15765	PWY-2622	trehalose biosynthesis IV
BJD09_15765	PWY-7900	BJD09_15765
BJD09_15770	PWY-7900	BJD09_15770
BJD09_15860	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD09_15860	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD09_15860	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD09_15860	PWY-6113	superpathway of mycolate biosynthesis
BJD09_15860	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD09_15860	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_15860	PWY-7663	gondoate biosynthesis (anaerobic)
BJD09_15860	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD09_15860	PWY-7858	BJD09_15860
BJD09_15860	PWYG-321	mycolate biosynthesis
BJD09_15950	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_15950	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BJD09_15950	PWY-6638	sulfolactate degradation III
BJD09_15950	PWY-6642	(<i>R</i>)-cysteate degradation
BJD09_15950	PWY-6643	coenzyme M biosynthesis II
BJD09_15950	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD09_15950	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_15950	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD09_15955	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_16405	PWY-6655	xanthan biosynthesis
BJD09_16405	PWY-6658	acetan biosynthesis
BJD09_16665	PWY-6348	phosphate acquisition
BJD09_16710	PWY-7533	gliotoxin biosynthesis
BJD09_16885	PWY-5169	cyanurate degradation
BJD09_16885	PWY-5703	urea degradation I
BJD09_16885	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BJD09_16890	PWY-5169	cyanurate degradation
BJD09_16890	PWY-5703	urea degradation I
BJD09_17030	PWY-5663	tetrahydrobiopterin biosynthesis I
BJD09_17030	PWY-5664	tetrahydrobiopterin biosynthesis II
BJD09_17030	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD09_17030	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD09_17030	PWY-6983	tetrahydrobiopterin biosynthesis III
BJD09_17030	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BJD09_17030	PWY-7852	BJD09_17030
BJD09_17075	PWY-5874	heme degradation
BJD09_17140	PWY-7199	pyrimidine deoxyribonucleosides salvage
BJD09_17175	PWY-5686	UMP biosynthesis
BJD09_17175	PWY-7790	BJD09_17175
BJD09_17175	PWY-7791	BJD09_17175
BJD09_17205	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD09_17205	PWY-6453	stigma estolide biosynthesis
BJD09_17205	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BJD09_17205	PWY-7587	oleate biosynthesis III (cyanobacteria)
BJD09_17285	PWY-6717	(1,4)-&beta;-xylan degradation
BJD09_17285	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BJD09_17300	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
BJD09_17300	PWY-7248	pectin degradation III
BJD09_17305	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_17310	PWY-6717	(1,4)-&beta;-xylan degradation
BJD09_17310	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BJD09_17335	PWY-4261	glycerol degradation I
BJD09_17390	PWY-6531	mannitol cycle
BJD09_17410	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_17565	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_17565	PWY-6416	quinate degradation II
BJD09_17565	PWY-6707	gallate biosynthesis
BJD09_17585	PWY-5530	sorbitol biosynthesis II
BJD09_17585	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_17705	PWY-5108	L-isoleucine biosynthesis V
BJD09_17705	PWY-5132	humulone biosynthesis
BJD09_17705	PWY-5133	cohumulone biosynthesis
BJD09_17705	PWY-6672	<i>cis</i>-genanyl-CoA degradation
BJD09_17705	PWY-7118	chitin degradation to ethanol
BJD09_17705	PWY-7857	BJD09_17705
BJD09_17750	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD09_17760	PWY-6012	acyl carrier protein metabolism I
BJD09_17760	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BJD09_17760	PWY-6289	petrobactin biosynthesis
BJD09_17830	PWY-7701	BJD09_17830
BJD09_18070	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BJD09_18130	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD09_18130	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD09_18130	PWY-6453	stigma estolide biosynthesis
BJD09_18130	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BJD09_18130	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BJD09_18130	PWY-7587	oleate biosynthesis III (cyanobacteria)
BJD09_18130	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
BJD09_18130	PWY-7782	BJD09_18130
BJD09_18135	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD09_18135	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD09_18135	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD09_18135	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD09_18135	PWY-6113	superpathway of mycolate biosynthesis
BJD09_18135	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD09_18135	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_18135	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD09_18135	PWY-7663	gondoate biosynthesis (anaerobic)
BJD09_18135	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD09_18135	PWY-7858	BJD09_18135
BJD09_18135	PWYG-321	mycolate biosynthesis
BJD09_18230	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD09_18255	PWY-5392	reductive TCA cycle II
BJD09_18255	PWY-5537	pyruvate fermentation to acetate V
BJD09_18255	PWY-5538	pyruvate fermentation to acetate VI
BJD09_18255	PWY-5690	TCA cycle II (plants and fungi)
BJD09_18255	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_18255	PWY-6728	methylaspartate cycle
BJD09_18255	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_18255	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD09_18270	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD09_18270	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_18270	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD09_18270	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD09_18270	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_18270	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_18270	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_18270	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD09_18280	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD09_18280	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_18280	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD09_18280	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD09_18280	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_18280	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_18280	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_18280	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD09_18315	PWY-6654	phosphopantothenate biosynthesis III
BJD09_18460	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD09_18460	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD09_18495	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD09_18595	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BJD09_18595	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BJD09_18600	PWY-3961	phosphopantothenate biosynthesis II
BJD09_18615	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD09_18615	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD09_18615	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD09_18615	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BJD09_18615	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD09_18615	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD09_18645	PWY-31	canavanine degradation
BJD09_18645	PWY-4984	urea cycle
BJD09_18645	PWY-6305	putrescine biosynthesis IV
BJD09_18645	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD09_18940	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
BJD09_18965	PWY-40	putrescine biosynthesis I
BJD09_18965	PWY-43	putrescine biosynthesis II
BJD09_18965	PWY-6305	putrescine biosynthesis IV
BJD09_18965	PWY-6834	spermidine biosynthesis III
BJD09_18975	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_18975	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_18975	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_18975	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_19010	PWY-7851	BJD09_19010
BJD09_19020	PWY-6749	CMP-legionaminate biosynthesis I
BJD09_19070	PWY-5686	UMP biosynthesis
BJD09_19070	PWY-7790	BJD09_19070
BJD09_19070	PWY-7791	BJD09_19070
BJD09_19090	PWY-7883	BJD09_19090
BJD09_19135	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
BJD09_19135	PWY-6853	ethylene biosynthesis II (microbes)
BJD09_19135	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD09_19150	PWY-3781	aerobic respiration I (cytochrome c)
BJD09_19150	PWY-4521	arsenite oxidation I (respiratory)
BJD09_19150	PWY-6692	Fe(II) oxidation
BJD09_19150	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD09_19235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD09_19235	PWY-6148	tetrahydromethanopterin biosynthesis
BJD09_19235	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD09_19235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD09_19290	PWY-6454	vancomycin resistance I
BJD09_19290	PWY-6455	vancomycin resistance II
BJD09_19360	PWY-6700	queuosine biosynthesis
BJD09_19415	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_19415	PWY-6549	L-glutamine biosynthesis III
BJD09_19415	PWY-6728	methylaspartate cycle
BJD09_19415	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_19415	PWY-7124	ethylene biosynthesis V (engineered)
BJD09_19415	PWY-7254	TCA cycle VII (acetate-producers)
BJD09_19415	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD09_19435	PWY-7980	BJD09_19435
BJD09_19630	PWY-6168	flavin biosynthesis III (fungi)
BJD09_19630	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD09_19630	PWY-7991	BJD09_19630
BJD09_19695	PWY-7799	BJD09_19695
BJD09_19695	PWY-7800	BJD09_19695
BJD09_19890	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
BJD09_19890	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
BJD09_19890	PWY-7622	UDP-galactofuranose biosynthesis
BJD09_19900	PWY-3821	galactose degradation III
BJD09_19900	PWY-6317	galactose degradation I (Leloir pathway)
BJD09_19900	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
BJD09_19900	PWY-6527	stachyose degradation
BJD09_19900	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
BJD09_19900	PWY-7344	UDP-D-galactose biosynthesis
BJD09_20175	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD09_20320	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BJD09_20320	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD09_20360	PWY-7980	BJD09_20360
BJD09_20370	PWY-7980	BJD09_20370
BJD09_20380	PWY-3461	L-tyrosine biosynthesis II
BJD09_20380	PWY-3462	L-phenylalanine biosynthesis II
BJD09_20380	PWY-6120	L-tyrosine biosynthesis III
BJD09_20380	PWY-6627	salinosporamide A biosynthesis
BJD09_20380	PWY-7626	bacilysin biosynthesis
BJD09_20390	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_20430	PWY-6749	CMP-legionaminate biosynthesis I
BJD09_20460	PWY-5386	methylglyoxal degradation I
BJD09_20500	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD09_20500	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD09_20500	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD09_20500	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD09_20500	PWY-6113	superpathway of mycolate biosynthesis
BJD09_20500	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD09_20500	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD09_20500	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD09_20500	PWY-7663	gondoate biosynthesis (anaerobic)
BJD09_20500	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD09_20500	PWY-7858	BJD09_20500
BJD09_20500	PWYG-321	mycolate biosynthesis
BJD09_20510	PWY-181	photorespiration
BJD09_20535	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BJD09_20705	PWY-3221	dTDP-L-rhamnose biosynthesis II
BJD09_20705	PWY-6808	dTDP-D-forosamine biosynthesis
BJD09_20705	PWY-6942	dTDP-D-desosamine biosynthesis
BJD09_20705	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD09_20705	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BJD09_20705	PWY-6974	dTDP-L-olivose biosynthesis
BJD09_20705	PWY-6976	dTDP-L-mycarose biosynthesis
BJD09_20705	PWY-7104	dTDP-L-megosamine biosynthesis
BJD09_20705	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BJD09_20705	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BJD09_20705	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BJD09_20705	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BJD09_20705	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BJD09_20705	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BJD09_20705	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BJD09_20705	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BJD09_20705	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
BJD09_20705	PWY-7688	BJD09_20705
BJD09_20705	PWY-7814	BJD09_20705
BJD09_20710	PWY-3221	dTDP-L-rhamnose biosynthesis II
BJD09_20710	PWY-6808	dTDP-D-forosamine biosynthesis
BJD09_20710	PWY-6942	dTDP-D-desosamine biosynthesis
BJD09_20710	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD09_20710	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BJD09_20710	PWY-6974	dTDP-L-olivose biosynthesis
BJD09_20710	PWY-6976	dTDP-L-mycarose biosynthesis
BJD09_20710	PWY-7104	dTDP-L-megosamine biosynthesis
BJD09_20710	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BJD09_20710	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BJD09_20710	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BJD09_20710	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BJD09_20710	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BJD09_20710	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BJD09_20710	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BJD09_20710	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BJD09_20710	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
BJD09_20710	PWY-7688	BJD09_20710
BJD09_20710	PWY-7814	BJD09_20710
BJD09_20725	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BJD09_20725	PWY-7820	BJD09_20725
BJD09_20735	PWY-5659	GDP-mannose biosynthesis
BJD09_20735	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BJD09_20740	PWY-6749	CMP-legionaminate biosynthesis I
BJD09_20810	PWY-5669	phosphatidylethanolamine biosynthesis I
BJD09_20905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD09_20905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD09_20905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD09_21055	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_21070	PWY-1001	cellulose biosynthesis
BJD09_21080	PWY-6788	cellulose degradation II (fungi)
BJD09_21105	PWY-4202	arsenate detoxification I (glutaredoxin)
BJD09_21105	PWY-4621	arsenate detoxification II (glutaredoxin)
BJD09_21240	PWY-5676	acetyl-CoA fermentation to butanoate II
BJD09_21240	PWY-5741	ethylmalonyl-CoA pathway
BJD09_21240	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD09_21240	PWY-7948	BJD09_21240
BJD09_21335	PWY-1281	sulfoacetaldehyde degradation I
BJD09_21335	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD09_21335	PWY-5482	pyruvate fermentation to acetate II
BJD09_21335	PWY-5485	pyruvate fermentation to acetate IV
BJD09_21335	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD09_21335	PWY-6637	sulfolactate degradation II
BJD09_21335	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD09_21370	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
BJD09_21410	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD09_21430	PWY-5101	L-isoleucine biosynthesis II
BJD09_21430	PWY-5103	L-isoleucine biosynthesis III
BJD09_21430	PWY-5104	L-isoleucine biosynthesis IV
BJD09_21430	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BJD09_21430	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BJD09_21430	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BJD09_21430	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_21435	PWY-5103	L-isoleucine biosynthesis III
BJD09_21435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD09_21440	PWY-4041	&gamma;-glutamyl cycle
BJD09_21440	PWY-4061	glutathione-mediated detoxification I
BJD09_21440	PWY-5826	hypoglycin biosynthesis
BJD09_21440	PWY-6842	glutathione-mediated detoxification II
BJD09_21440	PWY-7112	4-hydroxy-2-nonenal detoxification
BJD09_21440	PWY-7559	glutathione degradation (DUG pathway - yeast)
BJD09_21460	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
BJD09_21485	PWY-7805	BJD09_21485
BJD09_21485	PWY-7807	BJD09_21485
BJD09_21495	PWY-7805	BJD09_21495
BJD09_21495	PWY-7807	BJD09_21495
BJD09_21505	PWY-1042	glycolysis IV (plant cytosol)
BJD09_21505	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_21505	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_21505	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_21510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_21515	PWY-7883	BJD09_21515
BJD09_21600	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD09_21615	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD09_21615	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD09_21615	PWY-6897	thiamin salvage II
BJD09_21615	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BJD09_21615	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BJD09_21615	PWY-7356	thiamin salvage IV (yeast)
BJD09_21615	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD09_21635	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_21635	PWY-5723	Rubisco shunt
BJD09_21670	PWY-7799	BJD09_21670
BJD09_21670	PWY-7800	BJD09_21670
BJD09_21720	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD09_21765	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_21765	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_21765	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_21765	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_21840	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_21840	PWY-5723	Rubisco shunt
BJD09_21840	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD09_21840	PWY-6892	thiazole biosynthesis I (E. coli)
BJD09_21840	PWY-6901	superpathway of glucose and xylose degradation
BJD09_21840	PWY-7560	methylerythritol phosphate pathway II
BJD09_21935	PWY-2582	brassinosteroid biosynthesis II
BJD09_21935	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD09_21935	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD09_21935	PWY-6948	sitosterol degradation to androstenedione
BJD09_21935	PWY-699	brassinosteroid biosynthesis I
BJD09_21935	PWY-7299	progesterone biosynthesis
BJD09_21940	PWY-1042	glycolysis IV (plant cytosol)
BJD09_21940	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_21940	PWY-6901	superpathway of glucose and xylose degradation
BJD09_21940	PWY-7003	glycerol degradation to butanol
BJD09_21965	PWY-1042	glycolysis IV (plant cytosol)
BJD09_21965	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_21965	PWY-6886	1-butanol autotrophic biosynthesis
BJD09_21965	PWY-6901	superpathway of glucose and xylose degradation
BJD09_21965	PWY-7003	glycerol degradation to butanol
BJD09_21975	PWY-1042	glycolysis IV (plant cytosol)
BJD09_21975	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD09_21975	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_21975	PWY-5723	Rubisco shunt
BJD09_21975	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_21975	PWY-6886	1-butanol autotrophic biosynthesis
BJD09_21975	PWY-6901	superpathway of glucose and xylose degradation
BJD09_21975	PWY-7003	glycerol degradation to butanol
BJD09_21975	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD09_21975	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD09_21990	PWY-1042	glycolysis IV (plant cytosol)
BJD09_21990	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD09_21990	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD09_21990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD09_21990	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_22000	PWY-6825	phosphatidylcholine biosynthesis V
BJD09_22005	PWY-6936	seleno-amino acid biosynthesis
BJD09_22010	PWY-5194	siroheme biosynthesis
BJD09_22010	PWY-5196	factor 430 biosynthesis
BJD09_22010	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BJD09_22055	PWY-6683	sulfate reduction III (assimilatory)
BJD09_22060	PWY-6683	sulfate reduction III (assimilatory)
BJD09_22065	PWY-5278	sulfite oxidation III
BJD09_22065	PWY-5340	sulfate activation for sulfonation
BJD09_22065	PWY-6683	sulfate reduction III (assimilatory)
BJD09_22065	PWY-6932	selenate reduction
BJD09_22070	PWY-5278	sulfite oxidation III
BJD09_22070	PWY-5340	sulfate activation for sulfonation
BJD09_22070	PWY-6683	sulfate reduction III (assimilatory)
BJD09_22070	PWY-6932	selenate reduction
BJD09_22150	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD09_22210	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD09_22210	PWY-6892	thiazole biosynthesis I (E. coli)
BJD09_22515	PWY-7851	BJD09_22515
BJD09_22570	PWY-5392	reductive TCA cycle II
BJD09_22570	PWY-5537	pyruvate fermentation to acetate V
BJD09_22570	PWY-5538	pyruvate fermentation to acetate VI
BJD09_22570	PWY-5690	TCA cycle II (plants and fungi)
BJD09_22570	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_22570	PWY-6728	methylaspartate cycle
BJD09_22570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_22570	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD09_22575	PWY-5392	reductive TCA cycle II
BJD09_22575	PWY-5537	pyruvate fermentation to acetate V
BJD09_22575	PWY-5538	pyruvate fermentation to acetate VI
BJD09_22575	PWY-5690	TCA cycle II (plants and fungi)
BJD09_22575	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD09_22575	PWY-6728	methylaspartate cycle
BJD09_22575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD09_22575	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD09_22660	PWY-5381	pyridine nucleotide cycling (plants)
BJD09_22660	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BJD09_22660	PWY-7761	BJD09_22660
BJD09_22825	PWY-5443	aminopropanol phosphate biosynthesis I
BJD09_22835	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD09_22835	PWY-7962	BJD09_22835
BJD09_22835	PWY-7971	BJD09_22835
BJD09_22835	PWY-7972	BJD09_22835
BJD09_22840	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD09_22840	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD09_22840	PWY-7964	BJD09_22840
BJD09_22840	PWY-7965	BJD09_22840
BJD09_22840	PWY-7966	BJD09_22840
BJD09_22840	PWY-7967	BJD09_22840
BJD09_22840	PWY-7968	BJD09_22840
BJD09_22840	PWY-7969	BJD09_22840
BJD09_22840	PWY-7970	BJD09_22840
BJD09_22850	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD09_22850	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD09_22850	PWY-7961	BJD09_22850
BJD09_22850	PWY-7963	BJD09_22850
BJD09_22850	PWY-7964	BJD09_22850
BJD09_22850	PWY-7965	BJD09_22850
BJD09_22850	PWY-7966	BJD09_22850
BJD09_22850	PWY-7967	BJD09_22850
BJD09_22850	PWY-7968	BJD09_22850
BJD09_22850	PWY-7969	BJD09_22850
BJD09_22850	PWY-7970	BJD09_22850
BJD09_22850	PWY-7975	BJD09_22850
BJD09_22985	PWY-7782	BJD09_22985
BJD09_22985	PWY-7783	BJD09_22985
BJD09_23095	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD09_23105	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD09_23195	PWY-2722	trehalose degradation IV
BJD09_23195	PWY-2723	trehalose degradation V
BJD09_23195	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD09_23195	PWY-5661	GDP-glucose biosynthesis
BJD09_23195	PWY-621	sucrose degradation III (sucrose invertase)
BJD09_23195	PWY-7238	sucrose biosynthesis II
BJD09_23195	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD09_23225	PWY-6420	pyrroloquinoline quinone biosynthesis
BJD09_23260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD09_23260	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD09_23260	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD09_23260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD09_24035	PWY-4202	arsenate detoxification I (glutaredoxin)
BJD09_24035	PWY-4621	arsenate detoxification II (glutaredoxin)
