locus-tag class description BI316_00020 PF00004 ATPase family associated with various cellular activities (AAA) BI316_00020 PF07724 AAA domain (Cdc48 subfamily) BI316_00020 PF17871 AAA lid domain BI316_00020 PF10431 C-terminal, D2-small domain, of ClpB protein BI316_00045 PF05638 Type VI secretion system effector, Hcp BI316_00070 PF12464 Maltose acetyltransferase BI316_00070 PF14602 Hexapeptide repeat of succinyl-transferase BI316_00075 PF00580 UvrD/REP helicase N-terminal domain BI316_00075 PF13361 UvrD-like helicase C-terminal domain BI316_00090 PF13091 PLD-like domain BI316_00090 PF13396 Phospholipase_D-nuclease N-terminal BI316_00095 PF03466 LysR substrate binding domain BI316_00095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_00100 PF03737 Aldolase/RraA BI316_00105 PF04303 PrpF protein BI316_00115 PF04909 Amidohydrolase BI316_00120 PF00471 Ribosomal protein L33 BI316_00125 PF00830 Ribosomal L28 family BI316_00130 PF00873 AcrB/AcrD/AcrF family BI316_00135 PF13533 Biotin-lipoyl like BI316_00155 PF02527 rRNA small subunit methyltransferase G BI316_00160 PF09423 PhoD-like phosphatase BI316_00160 PF16655 PhoD-like phosphatase, N-terminal domain BI316_00165 PF16655 PhoD-like phosphatase, N-terminal domain BI316_00165 PF09423 PhoD-like phosphatase BI316_00170 PF01648 4'-phosphopantetheinyl transferase superfamily BI316_00175 PF04226 Transglycosylase associated protein BI316_00185 PF03372 Endonuclease/Exonuclease/phosphatase family BI316_00190 PF00480 ROK family BI316_00200 PF09312 SurA N-terminal domain BI316_00210 PF00474 Sodium:solute symporter family BI316_00215 PF04341 Protein of unknown function, DUF485 BI316_00225 PF13193 AMP-binding enzyme C-terminal domain BI316_00225 PF00501 AMP-binding enzyme BI316_00225 PF16177 Acetyl-coenzyme A synthetase N-terminus BI316_00230 PF00196 Bacterial regulatory proteins, luxR family BI316_00230 PF00072 Response regulator receiver domain BI316_00255 PF04616 Glycosyl hydrolases family 43 BI316_00255 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI316_00265 PF00248 Aldo/keto reductase family BI316_00280 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI316_00290 PF13378 Enolase C-terminal domain-like BI316_00290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI316_00300 PF05336 L-rhamnose mutarotase BI316_00305 PF07690 Major Facilitator Superfamily BI316_00310 PF01614 Bacterial transcriptional regulator BI316_00310 PF09339 IclR helix-turn-helix domain BI316_00315 PF02659 Putative manganese efflux pump BI316_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_00320 PF00512 His Kinase A (phospho-acceptor) domain BI316_00335 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BI316_00335 PF06165 Glycosyltransferase family 36 BI316_00355 PF13360 PQQ-like domain BI316_00355 PF13570 PQQ-like domain BI316_00355 PF01011 PQQ enzyme repeat BI316_00375 PF04357 TamB, inner membrane protein subunit of TAM complex BI316_00380 PF17243 POTRA domain TamA domain 1 BI316_00380 PF01103 Surface antigen BI316_00410 PF02092 Glycyl-tRNA synthetase beta subunit BI316_00410 PF05746 DALR anticodon binding domain BI316_00415 PF02091 Glycyl-tRNA synthetase alpha subunit BI316_00420 PF00437 Type II/IV secretion system protein BI316_00420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI316_00435 PF00958 GMP synthase C terminal domain BI316_00435 PF00117 Glutamine amidotransferase class-I BI316_00445 PF00902 Sec-independent protein translocase protein (TatC) BI316_00450 PF02416 mttA/Hcf106 family BI316_00455 PF02416 mttA/Hcf106 family BI316_00465 PF00762 Ferrochelatase BI316_00470 PF12697 Alpha/beta hydrolase family BI316_00490 PF04381 Putative exonuclease, RdgC BI316_00495 PF01171 PP-loop family BI316_00510 PF00356 Bacterial regulatory proteins, lacI family BI316_00515 PF07477 Glycosyl hydrolase family 67 C-terminus BI316_00515 PF07488 Glycosyl hydrolase family 67 middle domain BI316_00515 PF03648 Glycosyl hydrolase family 67 N-terminus BI316_00525 PF13378 Enolase C-terminal domain-like BI316_00525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI316_00530 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI316_00530 PF04616 Glycosyl hydrolases family 43 BI316_00535 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI316_00535 PF14310 Fibronectin type III-like domain BI316_00535 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_00535 PF07691 PA14 domain BI316_00540 PF01232 Mannitol dehydrogenase Rossmann domain BI316_00540 PF08125 Mannitol dehydrogenase C-terminal domain BI316_00570 PF00171 Aldehyde dehydrogenase family BI316_00595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI316_00595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI316_00615 PF08450 SMP-30/Gluconolactonase/LRE-like region BI316_00620 PF00331 Glycosyl hydrolase family 10 BI316_00625 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI316_00625 PF16355 Domain of unknown function (DUF4982) BI316_00625 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI316_00625 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI316_00625 PF00703 Glycosyl hydrolases family 2 BI316_00630 PF02614 Glucuronate isomerase BI316_00645 PF00553 Cellulose binding domain BI316_00645 PF03422 Carbohydrate binding module (family 6) BI316_00645 PF00331 Glycosyl hydrolase family 10 BI316_00665 PF04616 Glycosyl hydrolases family 43 BI316_00720 PF14765 Polyketide synthase dehydratase BI316_00720 PF00550 Phosphopantetheine attachment site BI316_00720 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_00720 PF08659 KR domain BI316_00720 PF16197 Ketoacyl-synthetase C-terminal extension BI316_00720 PF00107 Zinc-binding dehydrogenase BI316_00720 PF08240 Alcohol dehydrogenase GroES-like domain BI316_00720 PF00698 Acyl transferase domain BI316_00720 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_00725 PF01553 Acyltransferase BI316_00740 PF00356 Bacterial regulatory proteins, lacI family BI316_00755 PF04820 Tryptophan halogenase BI316_00760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BI316_00765 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BI316_00775 PF04337 Protein of unknown function, DUF480 BI316_00790 PF00580 UvrD/REP helicase N-terminal domain BI316_00790 PF13361 UvrD-like helicase C-terminal domain BI316_00795 PF00265 Thymidine kinase BI316_00800 PF00360 Phytochrome region BI316_00800 PF00512 His Kinase A (phospho-acceptor) domain BI316_00800 PF01590 GAF domain BI316_00800 PF08446 PAS fold BI316_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_00805 PF04349 Periplasmic glucan biosynthesis protein, MdoG BI316_00815 PF06827 Zinc finger found in FPG and IleRS BI316_00815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI316_00815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI316_00850 PF03594 Benzoate membrane transport protein BI316_00855 PF00360 Phytochrome region BI316_00855 PF13426 PAS domain BI316_00855 PF08446 PAS fold BI316_00855 PF01590 GAF domain BI316_00860 PF01126 Heme oxygenase BI316_00865 PF07690 Major Facilitator Superfamily BI316_00870 PF01263 Aldose 1-epimerase BI316_00880 PF02810 SEC-C motif BI316_00885 PF01925 Sulfite exporter TauE/SafE BI316_00905 PF01227 GTP cyclohydrolase I BI316_00915 PF07869 Protein of unknown function (DUF1656) BI316_00920 PF00529 HlyD membrane-fusion protein of T1SS BI316_00920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_00925 PF02321 Outer membrane efflux protein BI316_00930 PF04632 Fusaric acid resistance protein family BI316_00935 PF00083 Sugar (and other) transporter BI316_00940 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BI316_00945 PF13396 Phospholipase_D-nuclease N-terminal BI316_00945 PF13091 PLD-like domain BI316_00970 PF01850 PIN domain BI316_00995 PF00849 RNA pseudouridylate synthase BI316_01045 PF02785 Biotin carboxylase C-terminal domain BI316_01045 PF00289 Biotin carboxylase, N-terminal domain BI316_01045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI316_01050 PF01425 Amidase BI316_01085 PF12705 PD-(D/E)XK nuclease superfamily BI316_01085 PF13361 UvrD-like helicase C-terminal domain BI316_01085 PF00580 UvrD/REP helicase N-terminal domain BI316_01090 PF17946 RecC C-terminal domain BI316_01105 PF00005 ABC transporter BI316_01110 PF02405 Permease MlaE BI316_01115 PF02470 MlaD protein BI316_01120 PF05494 MlaC protein BI316_01130 PF04333 MlaA lipoprotein BI316_01140 PF00255 Glutathione peroxidase BI316_01150 PF02646 RmuC family BI316_01155 PF00107 Zinc-binding dehydrogenase BI316_01155 PF08240 Alcohol dehydrogenase GroES-like domain BI316_01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_01160 PF03466 LysR substrate binding domain BI316_01175 PF00043 Glutathione S-transferase, C-terminal domain BI316_01175 PF13417 Glutathione S-transferase, N-terminal domain BI316_01185 PF13520 Amino acid permease BI316_01190 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI316_01190 PF07971 Glycosyl hydrolase family 92 BI316_01200 PF10947 Protein of unknown function (DUF2628) BI316_01205 PF00990 Diguanylate cyclase, GGDEF domain BI316_01210 PF05651 Putative sugar diacid recognition BI316_01210 PF17853 GGDEF-like domain BI316_01210 PF13556 PucR C-terminal helix-turn-helix domain BI316_01215 PF02595 Glycerate kinase family BI316_01220 PF07690 Major Facilitator Superfamily BI316_01235 PF10672 S-adenosylmethionine-dependent methyltransferase BI316_01235 PF17785 PUA-like domain BI316_01245 PF03741 Integral membrane protein TerC family BI316_01255 PF01694 Rhomboid family BI316_01260 PF03009 Glycerophosphoryl diester phosphodiesterase family BI316_01270 PF01569 PAP2 superfamily BI316_01275 PF01926 50S ribosome-binding GTPase BI316_01275 PF10396 GTP-binding protein TrmE N-terminus BI316_01275 PF12631 MnmE helical domain BI316_01280 PF01522 Polysaccharide deacetylase BI316_01285 PF14849 YidC periplasmic domain BI316_01285 PF02096 60Kd inner membrane protein BI316_01290 PF00825 Ribonuclease P BI316_01295 PF00468 Ribosomal protein L34 BI316_01305 PF08299 Bacterial dnaA protein helix-turn-helix BI316_01305 PF00308 Bacterial dnaA protein BI316_01305 PF11638 DnaA N-terminal domain BI316_01310 PF02767 DNA polymerase III beta subunit, central domain BI316_01310 PF00712 DNA polymerase III beta subunit, N-terminal domain BI316_01310 PF02768 DNA polymerase III beta subunit, C-terminal domain BI316_01315 PF02463 RecF/RecN/SMC N terminal domain BI316_01320 PF00204 DNA gyrase B BI316_01320 PF18053 DNA gyrase B subunit insert domain BI316_01320 PF01751 Toprim domain BI316_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_01320 PF00986 DNA gyrase B subunit, carboxyl terminus BI316_01330 PF01435 Peptidase family M48 BI316_01340 PF03544 Gram-negative bacterial TonB protein C-terminal BI316_01345 PF01618 MotA/TolQ/ExbB proton channel family BI316_01350 PF02472 Biopolymer transport protein ExbD/TolR BI316_01355 PF02472 Biopolymer transport protein ExbD/TolR BI316_01360 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BI316_01370 PF13091 PLD-like domain BI316_01370 PF13396 Phospholipase_D-nuclease N-terminal BI316_01385 PF04055 Radical SAM superfamily BI316_01395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BI316_01410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI316_01410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI316_01415 PF03572 Peptidase family S41 BI316_01415 PF13180 PDZ domain BI316_01420 PF01551 Peptidase family M23 BI316_01430 PF04389 Peptidase family M28 BI316_01440 PF00150 Cellulase (glycosyl hydrolase family 5) BI316_01450 PF00150 Cellulase (glycosyl hydrolase family 5) BI316_01455 PF00150 Cellulase (glycosyl hydrolase family 5) BI316_01465 PF00107 Zinc-binding dehydrogenase BI316_01465 PF08240 Alcohol dehydrogenase GroES-like domain BI316_01475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BI316_01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_01480 PF01493 GXGXG motif BI316_01480 PF01645 Conserved region in glutamate synthase BI316_01480 PF04898 Glutamate synthase central domain BI316_01480 PF00310 Glutamine amidotransferases class-II BI316_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_01510 PF03466 LysR substrate binding domain BI316_01530 PF02397 Bacterial sugar transferase BI316_01535 PF02350 UDP-N-acetylglucosamine 2-epimerase BI316_01545 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI316_01550 PF13439 Glycosyltransferase Family 4 BI316_01550 PF00534 Glycosyl transferases group 1 BI316_01570 PF13537 Glutamine amidotransferase domain BI316_01570 PF00733 Asparagine synthase BI316_01585 PF16363 GDP-mannose 4,6 dehydratase BI316_01600 PF00005 ABC transporter BI316_01600 PF00664 ABC transporter transmembrane region BI316_01615 PF00733 Asparagine synthase BI316_01615 PF13537 Glutamine amidotransferase domain BI316_01635 PF00685 Sulfotransferase domain BI316_01725 PF00270 DEAD/DEAH box helicase BI316_01725 PF09369 Domain of unknown function (DUF1998) BI316_01725 PF00271 Helicase conserved C-terminal domain BI316_01730 PF03006 Haemolysin-III related BI316_01750 PF00106 short chain dehydrogenase BI316_01760 PF03466 LysR substrate binding domain BI316_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_01780 PF02525 Flavodoxin-like fold BI316_01795 PF13333 Integrase core domain BI316_01795 PF00665 Integrase core domain BI316_01795 PF13276 HTH-like domain BI316_01850 PF05532 CsbD-like BI316_01870 PF01447 Thermolysin metallopeptidase, catalytic domain BI316_01870 PF16485 Protealysin propeptide BI316_01870 PF02868 Thermolysin metallopeptidase, alpha-helical domain BI316_01880 PF00293 NUDIX domain BI316_01880 PF13344 Haloacid dehalogenase-like hydrolase BI316_01900 PF00085 Thioredoxin BI316_01910 PF00083 Sugar (and other) transporter BI316_01910 PF08946 Osmosensory transporter coiled coil BI316_01950 PF17863 AAA lid domain BI316_01950 PF07726 ATPase family associated with various cellular activities (AAA) BI316_01980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BI316_01985 PF00155 Aminotransferase class I and II BI316_01990 PF07715 TonB-dependent Receptor Plug Domain BI316_01990 PF00593 TonB dependent receptor BI316_02000 PF07883 Cupin domain BI316_02005 PF00171 Aldehyde dehydrogenase family BI316_02025 PF02735 Ku70/Ku80 beta-barrel domain BI316_02030 PF01070 FMN-dependent dehydrogenase BI316_02040 PF00144 Beta-lactamase BI316_02045 PF07730 Histidine kinase BI316_02050 PF00072 Response regulator receiver domain BI316_02050 PF00196 Bacterial regulatory proteins, luxR family BI316_02070 PF00486 Transcriptional regulatory protein, C terminal BI316_02070 PF18500 CadC C-terminal domain 1 BI316_02075 PF12241 Trans-2-enoyl-CoA reductase catalytic region BI316_02075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BI316_02075 PF07055 Enoyl reductase FAD binding domain BI316_02085 PF00294 pfkB family carbohydrate kinase BI316_02165 PF00128 Alpha amylase, catalytic domain BI316_02165 PF11896 Domain of unknown function (DUF3416) BI316_02170 PF00128 Alpha amylase, catalytic domain BI316_02170 PF16657 Maltogenic Amylase, C-terminal domain BI316_02175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI316_02175 PF02806 Alpha amylase, C-terminal all-beta domain BI316_02175 PF00128 Alpha amylase, catalytic domain BI316_02190 PF00248 Aldo/keto reductase family BI316_02195 PF00135 Carboxylesterase family BI316_02200 PF13472 GDSL-like Lipase/Acylhydrolase family BI316_02200 PF07859 alpha/beta hydrolase fold BI316_02210 PF03480 Bacterial extracellular solute-binding protein, family 7 BI316_02220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BI316_02225 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI316_02225 PF04616 Glycosyl hydrolases family 43 BI316_02230 PF00356 Bacterial regulatory proteins, lacI family BI316_02240 PF04962 KduI/IolB family BI316_02255 PF00657 GDSL-like Lipase/Acylhydrolase BI316_02270 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BI316_02275 PF01037 Lrp/AsnC ligand binding domain BI316_02280 PF07660 Secretin and TonB N terminus short domain BI316_02280 PF07715 TonB-dependent Receptor Plug Domain BI316_02280 PF00593 TonB dependent receptor BI316_02285 PF01734 Patatin-like phospholipase BI316_02295 PF00005 ABC transporter BI316_02310 PF00005 ABC transporter BI316_02315 PF00528 Binding-protein-dependent transport system inner membrane component BI316_02325 PF12867 DinB superfamily BI316_02325 PF03781 Sulfatase-modifying factor enzyme 1 BI316_02345 PF01381 Helix-turn-helix BI316_02370 PF10609 NUBPL iron-transfer P-loop NTPase BI316_02370 PF01883 Iron-sulfur cluster assembly protein BI316_02385 PF13091 PLD-like domain BI316_02395 PF03061 Thioesterase superfamily BI316_02425 PF00107 Zinc-binding dehydrogenase BI316_02425 PF08240 Alcohol dehydrogenase GroES-like domain BI316_02435 PF02673 Bacitracin resistance protein BacA BI316_02445 PF03951 Glutamine synthetase, beta-Grasp domain BI316_02445 PF00120 Glutamine synthetase, catalytic domain BI316_02450 PF00543 Nitrogen regulatory protein P-II BI316_02455 PF00909 Ammonium Transporter Family BI316_02460 PF00989 PAS fold BI316_02460 PF00512 His Kinase A (phospho-acceptor) domain BI316_02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_02465 PF00158 Sigma-54 interaction domain BI316_02465 PF02954 Bacterial regulatory protein, Fis family BI316_02465 PF00072 Response regulator receiver domain BI316_02470 PF00080 Copper/zinc superoxide dismutase (SODC) BI316_02475 PF00080 Copper/zinc superoxide dismutase (SODC) BI316_02485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI316_02495 PF02803 Thiolase, C-terminal domain BI316_02495 PF00108 Thiolase, N-terminal domain BI316_02530 PF00581 Rhodanese-like domain BI316_02535 PF02556 Preprotein translocase subunit SecB BI316_02540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BI316_02540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BI316_02555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI316_02555 PF00205 Thiamine pyrophosphate enzyme, central domain BI316_02555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI316_02560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_02565 PF00072 Response regulator receiver domain BI316_02565 PF00158 Sigma-54 interaction domain BI316_02565 PF02954 Bacterial regulatory protein, Fis family BI316_02580 PF07690 Major Facilitator Superfamily BI316_02585 PF00588 SpoU rRNA Methylase family BI316_02600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI316_02600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI316_02605 PF02661 Fic/DOC family BI316_02605 PF13784 Fic/DOC family N-terminal BI316_02610 PF00561 alpha/beta hydrolase fold BI316_02615 PF03692 Putative zinc- or iron-chelating domain BI316_02620 PF00501 AMP-binding enzyme BI316_02625 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI316_02640 PF01820 D-ala D-ala ligase N-terminus BI316_02640 PF07478 D-ala D-ala ligase C-terminus BI316_02655 PF03109 ABC1 family BI316_02665 PF00849 RNA pseudouridylate synthase BI316_02675 PF00472 RF-1 domain BI316_02685 PF01112 Asparaginase BI316_02690 PF01432 Peptidase family M3 BI316_02695 PF12706 Beta-lactamase superfamily domain BI316_02715 PF12833 Helix-turn-helix domain BI316_02720 PF00999 Sodium/hydrogen exchanger family BI316_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_02725 PF03466 LysR substrate binding domain BI316_02730 PF01274 Malate synthase BI316_02735 PF00463 Isocitrate lyase family BI316_02740 PF00990 Diguanylate cyclase, GGDEF domain BI316_02760 PF00326 Prolyl oligopeptidase family BI316_02765 PF00289 Biotin carboxylase, N-terminal domain BI316_02765 PF02785 Biotin carboxylase C-terminal domain BI316_02765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI316_02765 PF00364 Biotin-requiring enzyme BI316_02770 PF01039 Carboxyl transferase domain BI316_02775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_02775 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_02775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_02835 PF02492 CobW/HypB/UreG, nucleotide-binding domain BI316_02835 PF07683 Cobalamin synthesis protein cobW C-terminal domain BI316_02855 PF03969 AFG1-like ATPase BI316_02860 PF01047 MarR family BI316_02865 PF02566 OsmC-like protein BI316_02895 PF16884 N-terminal domain of oxidoreductase BI316_02895 PF00107 Zinc-binding dehydrogenase BI316_02910 PF00849 RNA pseudouridylate synthase BI316_02915 PF00593 TonB dependent receptor BI316_02925 PF04408 Helicase associated domain (HA2) BI316_02925 PF00271 Helicase conserved C-terminal domain BI316_02925 PF00270 DEAD/DEAH box helicase BI316_02925 PF08482 ATP-dependent helicase C-terminal BI316_02935 PF07308 Protein of unknown function (DUF1456) BI316_02940 PF00576 HIUase/Transthyretin family BI316_02945 PF13454 FAD-NAD(P)-binding BI316_02950 PF09349 OHCU decarboxylase BI316_02950 PF01014 Uricase BI316_02965 PF00266 Aminotransferase class-V BI316_02970 PF07687 Peptidase dimerisation domain BI316_02970 PF01546 Peptidase family M20/M25/M40 BI316_02975 PF03466 LysR substrate binding domain BI316_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_02980 PF07690 Major Facilitator Superfamily BI316_02995 PF01425 Amidase BI316_03010 PF00860 Permease family BI316_03020 PF00111 2Fe-2S iron-sulfur cluster binding domain BI316_03025 PF00355 Rieske [2Fe-2S] domain BI316_03030 PF03466 LysR substrate binding domain BI316_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_03035 PF01026 TatD related DNase BI316_03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_03050 PF03466 LysR substrate binding domain BI316_03055 PF07690 Major Facilitator Superfamily BI316_03070 PF02146 Sir2 family BI316_03075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI316_03080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI316_03080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI316_03090 PF00551 Formyl transferase BI316_03095 PF00072 Response regulator receiver domain BI316_03095 PF00486 Transcriptional regulatory protein, C terminal BI316_03100 PF00512 His Kinase A (phospho-acceptor) domain BI316_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_03100 PF00672 HAMP domain BI316_03105 PF00529 HlyD membrane-fusion protein of T1SS BI316_03105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_03110 PF00873 AcrB/AcrD/AcrF family BI316_03115 PF02321 Outer membrane efflux protein BI316_03125 PF02219 Methylenetetrahydrofolate reductase BI316_03130 PF02677 Epoxyqueuosine reductase QueH BI316_03135 PF03466 LysR substrate binding domain BI316_03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_03140 PF03358 NADPH-dependent FMN reductase BI316_03150 PF08267 Cobalamin-independent synthase, N-terminal domain BI316_03150 PF01717 Cobalamin-independent synthase, Catalytic domain BI316_03155 PF03812 2-keto-3-deoxygluconate permease BI316_03170 PF05368 NmrA-like family BI316_03175 PF01638 HxlR-like helix-turn-helix BI316_03210 PF13495 Phage integrase, N-terminal SAM-like domain BI316_03210 PF00589 Phage integrase family BI316_03215 PF00920 Dehydratase family BI316_03230 PF00132 Bacterial transferase hexapeptide (six repeats) BI316_03240 PF07690 Major Facilitator Superfamily BI316_03245 PF01966 HD domain BI316_03245 PF11871 Domain of unknown function (DUF3391) BI316_03265 PF00171 Aldehyde dehydrogenase family BI316_03275 PF01494 FAD binding domain BI316_03285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI316_03285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI316_03290 PF00230 Major intrinsic protein BI316_03295 PF01266 FAD dependent oxidoreductase BI316_03295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BI316_03300 PF00455 DeoR C terminal sensor domain BI316_03300 PF08220 DeoR-like helix-turn-helix domain BI316_03310 PF00355 Rieske [2Fe-2S] domain BI316_03315 PF01144 Coenzyme A transferase BI316_03320 PF01144 Coenzyme A transferase BI316_03325 PF00108 Thiolase, N-terminal domain BI316_03325 PF02803 Thiolase, C-terminal domain BI316_03330 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BI316_03330 PF00775 Dioxygenase BI316_03340 PF00206 Lyase BI316_03340 PF10397 Adenylosuccinate lyase C-terminus BI316_03345 PF12146 Serine aminopeptidase, S33 BI316_03350 PF02627 Carboxymuconolactone decarboxylase family BI316_03360 PF01614 Bacterial transcriptional regulator BI316_03360 PF09339 IclR helix-turn-helix domain BI316_03370 PF07859 alpha/beta hydrolase fold BI316_03375 PF10677 Protein of unknown function (DUF2490) BI316_03380 PF13932 GidA associated domain BI316_03380 PF01134 Glucose inhibited division protein A BI316_03390 PF00291 Pyridoxal-phosphate dependent enzyme BI316_03410 PF13649 Methyltransferase domain BI316_03420 PF12697 Alpha/beta hydrolase family BI316_03430 PF00155 Aminotransferase class I and II BI316_03435 PF04055 Radical SAM superfamily BI316_03435 PF06968 Biotin and Thiamin Synthesis associated domain BI316_03445 PF01040 UbiA prenyltransferase family BI316_03470 PF05819 NolX protein BI316_03505 PF01313 Bacterial export proteins, family 3 BI316_03510 PF00813 FliP family BI316_03525 PF00771 FHIPEP family BI316_03530 PF01312 FlhB HrpN YscU SpaS Family BI316_03545 PF01514 Secretory protein of YscJ/FliF family BI316_03560 PF18269 T3SS EscN ATPase C-terminal domain BI316_03560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI316_03560 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI316_03570 PF01311 Bacterial export proteins, family 1 BI316_03585 PF01464 Transglycosylase SLT domain BI316_03605 PF12795 Mechanosensitive ion channel porin domain BI316_03605 PF00924 Mechanosensitive ion channel BI316_03605 PF12794 Mechanosensitive ion channel inner membrane domain 1 BI316_03610 PF00884 Sulfatase BI316_03620 PF03109 ABC1 family BI316_03625 PF05661 Protein of unknown function (DUF808) BI316_03630 PF00990 Diguanylate cyclase, GGDEF domain BI316_03630 PF00072 Response regulator receiver domain BI316_03635 PF00534 Glycosyl transferases group 1 BI316_03635 PF08323 Starch synthase catalytic domain BI316_03640 PF00128 Alpha amylase, catalytic domain BI316_03640 PF02806 Alpha amylase, C-terminal all-beta domain BI316_03640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI316_03645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI316_03645 PF00128 Alpha amylase, catalytic domain BI316_03645 PF11941 Domain of unknown function (DUF3459) BI316_03650 PF02446 4-alpha-glucanotransferase BI316_03655 PF00128 Alpha amylase, catalytic domain BI316_03665 PF00128 Alpha amylase, catalytic domain BI316_03665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI316_03670 PF13460 NAD(P)H-binding BI316_03690 PF06903 VirK protein BI316_03695 PF02321 Outer membrane efflux protein BI316_03710 PF00873 AcrB/AcrD/AcrF family BI316_03725 PF00270 DEAD/DEAH box helicase BI316_03725 PF00271 Helicase conserved C-terminal domain BI316_03730 PF02817 e3 binding domain BI316_03730 PF00364 Biotin-requiring enzyme BI316_03730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI316_03740 PF02780 Transketolase, C-terminal domain BI316_03740 PF02779 Transketolase, pyrimidine binding domain BI316_03745 PF00676 Dehydrogenase E1 component BI316_03755 PF03301 Tryptophan 2,3-dioxygenase BI316_03760 PF00854 POT family BI316_03770 PF01047 MarR family BI316_03775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI316_03785 PF04209 homogentisate 1,2-dioxygenase BI316_03805 PF03334 Na+/H+ antiporter subunit BI316_03810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BI316_03820 PF00361 Proton-conducting membrane transporter BI316_03825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI316_03830 PF13244 Domain of unknown function (DUF4040) BI316_03830 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BI316_03830 PF00361 Proton-conducting membrane transporter BI316_03830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI316_03855 PF00182 Chitinase class I BI316_03875 PF01259 SAICAR synthetase BI316_03880 PF00226 DnaJ domain BI316_03880 PF05099 Tellurite resistance protein TerB BI316_03890 PF00834 Ribulose-phosphate 3 epimerase family BI316_03895 PF00583 Acetyltransferase (GNAT) family BI316_03900 PF00781 Diacylglycerol kinase catalytic domain BI316_03905 PF04715 Anthranilate synthase component I, N terminal region BI316_03905 PF00425 chorismate binding enzyme BI316_03915 PF00117 Glutamine amidotransferase class-I BI316_03925 PF00591 Glycosyl transferase family, a/b domain BI316_03925 PF02885 Glycosyl transferase family, helical bundle domain BI316_03930 PF00218 Indole-3-glycerol phosphate synthase BI316_03940 PF00325 Bacterial regulatory proteins, crp family BI316_03940 PF00027 Cyclic nucleotide-binding domain BI316_03945 PF02675 S-adenosylmethionine decarboxylase BI316_03950 PF00893 Small Multidrug Resistance protein BI316_03955 PF03232 Ubiquinone biosynthesis protein COQ7 BI316_03960 PF00572 Ribosomal protein L13 BI316_03965 PF00380 Ribosomal protein S9/S16 BI316_03980 PF00293 NUDIX domain BI316_03990 PF00210 Ferritin-like domain BI316_03995 PF00512 His Kinase A (phospho-acceptor) domain BI316_03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_03995 PF00072 Response regulator receiver domain BI316_03995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI316_03995 PF00672 HAMP domain BI316_03995 PF01627 Hpt domain BI316_04000 PF00072 Response regulator receiver domain BI316_04000 PF00486 Transcriptional regulatory protein, C terminal BI316_04020 PF01521 Iron-sulphur cluster biosynthesis BI316_04045 PF00293 NUDIX domain BI316_04045 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BI316_04045 PF09297 NADH pyrophosphatase zinc ribbon domain BI316_04050 PF17113 Regulatory signalling modulator protein AmpE BI316_04050 PF03186 CobD/Cbib protein BI316_04070 PF07690 Major Facilitator Superfamily BI316_04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_04075 PF03466 LysR substrate binding domain BI316_04080 PF07690 Major Facilitator Superfamily BI316_04085 PF12805 FUSC-like inner membrane protein yccS BI316_04095 PF02844 Phosphoribosylglycinamide synthetase, N domain BI316_04095 PF02843 Phosphoribosylglycinamide synthetase, C domain BI316_04095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BI316_04105 PF01808 AICARFT/IMPCHase bienzyme BI316_04105 PF02142 MGS-like domain BI316_04110 PF01066 CDP-alcohol phosphatidyltransferase BI316_04115 PF12146 Serine aminopeptidase, S33 BI316_04115 PF12147 Putative methyltransferase BI316_04120 PF00782 Dual specificity phosphatase, catalytic domain BI316_04150 PF02954 Bacterial regulatory protein, Fis family BI316_04160 PF01381 Helix-turn-helix BI316_04190 PF02785 Biotin carboxylase C-terminal domain BI316_04190 PF00289 Biotin carboxylase, N-terminal domain BI316_04190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI316_04200 PF00364 Biotin-requiring enzyme BI316_04205 PF01220 Dehydroquinase class II BI316_04210 PF02683 Cytochrome C biogenesis protein transmembrane region BI316_04210 PF11412 Disulphide bond corrector protein DsbC BI316_04215 PF03091 CutA1 divalent ion tolerance protein BI316_04230 PF01852 START domain BI316_04245 PF00106 short chain dehydrogenase BI316_04250 PF04231 Endonuclease I BI316_04260 PF00166 Chaperonin 10 Kd subunit BI316_04265 PF00118 TCP-1/cpn60 chaperonin family BI316_04275 PF00593 TonB dependent receptor BI316_04275 PF07715 TonB-dependent Receptor Plug Domain BI316_04280 PF00793 DAHP synthetase I family BI316_04295 PF08450 SMP-30/Gluconolactonase/LRE-like region BI316_04305 PF03710 Glutamate-ammonia ligase adenylyltransferase BI316_04305 PF08335 GlnD PII-uridylyltransferase BI316_04310 PF02592 Putative vitamin uptake transporter BI316_04330 PF00881 Nitroreductase family BI316_04335 PF04264 YceI-like domain BI316_04360 PF16957 Malonate decarboxylase, alpha subunit, transporter BI316_04365 PF06857 Malonate decarboxylase delta subunit (MdcD) BI316_04370 PF01039 Carboxyl transferase domain BI316_04380 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BI316_04385 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BI316_04390 PF00698 Acyl transferase domain BI316_04400 PF00392 Bacterial regulatory proteins, gntR family BI316_04400 PF07729 FCD domain BI316_04405 PF13419 Haloacid dehalogenase-like hydrolase BI316_04435 PF07745 Glycosyl hydrolase family 53 BI316_04440 PF17831 Pyruvate dehydrogenase E1 component middle domain BI316_04440 PF00456 Transketolase, thiamine diphosphate binding domain BI316_04445 PF00145 C-5 cytosine-specific DNA methylase BI316_04450 PF13333 Integrase core domain BI316_04450 PF13276 HTH-like domain BI316_04450 PF00665 Integrase core domain BI316_04460 PF00106 short chain dehydrogenase BI316_04475 PF00106 short chain dehydrogenase BI316_04485 PF13409 Glutathione S-transferase, N-terminal domain BI316_04510 PF03176 MMPL family BI316_04510 PF12823 Domain of unknown function (DUF3817) BI316_04520 PF00326 Prolyl oligopeptidase family BI316_04520 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI316_04525 PF07759 Protein of unknown function (DUF1615) BI316_04535 PF05230 MASE2 domain BI316_04535 PF00990 Diguanylate cyclase, GGDEF domain BI316_04560 PF00892 EamA-like transporter family BI316_04565 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI316_04575 PF00324 Amino acid permease BI316_04585 PF01544 CorA-like Mg2+ transporter protein BI316_04595 PF01204 Trehalase BI316_04610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI316_04610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI316_04640 PF03707 Bacterial signalling protein N terminal repeat BI316_04640 PF00563 EAL domain BI316_04640 PF00990 Diguanylate cyclase, GGDEF domain BI316_04645 PF02203 Tar ligand binding domain homologue BI316_04645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_04645 PF00672 HAMP domain BI316_04650 PF00553 Cellulose binding domain BI316_04650 PF00150 Cellulase (glycosyl hydrolase family 5) BI316_04655 PF01740 STAS domain BI316_04655 PF00916 Sulfate permease family BI316_04665 PF08448 PAS fold BI316_04665 PF00990 Diguanylate cyclase, GGDEF domain BI316_04685 PF13632 Glycosyl transferase family group 2 BI316_04695 PF07694 5TMR of 5TMR-LYT BI316_04695 PF06580 Histidine kinase BI316_04700 PF00072 Response regulator receiver domain BI316_04700 PF04397 LytTr DNA-binding domain BI316_04705 PF03900 Porphobilinogen deaminase, C-terminal domain BI316_04705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BI316_04735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI316_04735 PF00326 Prolyl oligopeptidase family BI316_04745 PF00155 Aminotransferase class I and II BI316_04755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI316_04755 PF00326 Prolyl oligopeptidase family BI316_04760 PF04304 Protein of unknown function (DUF454) BI316_04770 PF01678 Diaminopimelate epimerase BI316_04780 PF02899 Phage integrase, N-terminal SAM-like domain BI316_04780 PF00589 Phage integrase family BI316_04785 PF00227 Proteasome subunit BI316_04790 PF00004 ATPase family associated with various cellular activities (AAA) BI316_04790 PF07724 AAA domain (Cdc48 subfamily) BI316_04790 PF10431 C-terminal, D2-small domain, of ClpB protein BI316_04800 PF13673 Acetyltransferase (GNAT) domain BI316_04805 PF13533 Biotin-lipoyl like BI316_04815 PF01209 ubiE/COQ5 methyltransferase family BI316_04820 PF00563 EAL domain BI316_04820 PF00990 Diguanylate cyclase, GGDEF domain BI316_04820 PF03707 Bacterial signalling protein N terminal repeat BI316_04825 PF01433 Peptidase family M1 domain BI316_04825 PF11838 ERAP1-like C-terminal domain BI316_04845 PF13360 PQQ-like domain BI316_04850 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI316_04865 PF00107 Zinc-binding dehydrogenase BI316_04865 PF08240 Alcohol dehydrogenase GroES-like domain BI316_04875 PF01590 GAF domain BI316_04875 PF02954 Bacterial regulatory protein, Fis family BI316_04875 PF00158 Sigma-54 interaction domain BI316_04880 PF00294 pfkB family carbohydrate kinase BI316_04890 PF04085 rod shape-determining protein MreC BI316_04900 PF00905 Penicillin binding protein transpeptidase domain BI316_04900 PF03717 Penicillin-binding Protein dimerisation domain BI316_04905 PF01098 Cell cycle protein BI316_04910 PF00295 Glycosyl hydrolases family 28 BI316_04915 PF13406 Transglycosylase SLT domain BI316_04920 PF05036 Sporulation related domain BI316_04920 PF03330 Lytic transglycolase BI316_04930 PF00768 D-alanyl-D-alanine carboxypeptidase BI316_04930 PF07943 Penicillin-binding protein 5, C-terminal domain BI316_04940 PF04359 Protein of unknown function (DUF493) BI316_04945 PF03099 Biotin/lipoate A/B protein ligase family BI316_04950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BI316_04950 PF04055 Radical SAM superfamily BI316_04955 PF00595 PDZ domain BI316_04955 PF17804 Tail specific protease N-terminal domain BI316_04955 PF03572 Peptidase family S41 BI316_04955 PF11818 C-terminal domain of tail specific protease (DUF3340) BI316_04965 PF03466 LysR substrate binding domain BI316_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_04975 PF01467 Cytidylyltransferase-like BI316_04975 PF00293 NUDIX domain BI316_05010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BI316_05010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI316_05015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI316_05015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI316_05020 PF04972 BON domain BI316_05025 PF08446 PAS fold BI316_05025 PF00512 His Kinase A (phospho-acceptor) domain BI316_05025 PF00360 Phytochrome region BI316_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_05025 PF01590 GAF domain BI316_05030 PF00072 Response regulator receiver domain BI316_05035 PF00512 His Kinase A (phospho-acceptor) domain BI316_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_05040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI316_05090 PF00263 Bacterial type II and III secretion system protein BI316_05090 PF03958 Bacterial type II/III secretion system short domain BI316_05095 PF00437 Type II/IV secretion system protein BI316_05100 PF00482 Type II secretion system (T2SS), protein F BI316_05105 PF08334 Type II secretion system (T2SS), protein G BI316_05105 PF07963 Prokaryotic N-terminal methylation motif BI316_05110 PF12019 Type II transport protein GspH BI316_05110 PF07963 Prokaryotic N-terminal methylation motif BI316_05115 PF02501 Type II secretion system (T2SS), protein I BI316_05115 PF07963 Prokaryotic N-terminal methylation motif BI316_05120 PF11612 Type II secretion system (T2SS), protein J BI316_05120 PF07963 Prokaryotic N-terminal methylation motif BI316_05125 PF03934 Type II secretion system (T2SS), protein K BI316_05170 PF07690 Major Facilitator Superfamily BI316_05175 PF00356 Bacterial regulatory proteins, lacI family BI316_05180 PF01380 SIS domain BI316_05185 PF01979 Amidohydrolase family BI316_05195 PF01743 Poly A polymerase head domain BI316_05195 PF12627 Probable RNA and SrmB- binding site of polymerase A BI316_05195 PF01966 HD domain BI316_05200 PF00732 GMC oxidoreductase BI316_05200 PF05199 GMC oxidoreductase BI316_05205 PF00171 Aldehyde dehydrogenase family BI316_05210 PF02028 BCCT, betaine/carnitine/choline family transporter BI316_05225 PF01323 DSBA-like thioredoxin domain BI316_05235 PF00034 Cytochrome c BI316_05240 PF01926 50S ribosome-binding GTPase BI316_05245 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BI316_05245 PF00753 Metallo-beta-lactamase superfamily BI316_05245 PF10996 Beta-Casp domain BI316_05260 PF04107 Glutamate-cysteine ligase family 2(GCS2) BI316_05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_05265 PF00672 HAMP domain BI316_05265 PF00512 His Kinase A (phospho-acceptor) domain BI316_05270 PF00486 Transcriptional regulatory protein, C terminal BI316_05270 PF00072 Response regulator receiver domain BI316_05285 PF02583 Metal-sensitive transcriptional repressor BI316_05290 PF08240 Alcohol dehydrogenase GroES-like domain BI316_05290 PF00107 Zinc-binding dehydrogenase BI316_05295 PF04828 Glutathione-dependent formaldehyde-activating enzyme BI316_05300 PF00756 Putative esterase BI316_05310 PF00392 Bacterial regulatory proteins, gntR family BI316_05310 PF00155 Aminotransferase class I and II BI316_05315 PF02567 Phenazine biosynthesis-like protein BI316_05320 PF00892 EamA-like transporter family BI316_05330 PF12848 ABC transporter BI316_05330 PF00005 ABC transporter BI316_05340 PF00464 Serine hydroxymethyltransferase BI316_05345 PF03477 ATP cone domain BI316_05355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BI316_05355 PF01872 RibD C-terminal domain BI316_05365 PF00677 Lumazine binding domain BI316_05370 PF00925 GTP cyclohydrolase II BI316_05370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BI316_05375 PF00885 6,7-dimethyl-8-ribityllumazine synthase BI316_05380 PF01029 NusB family BI316_05385 PF00586 AIR synthase related protein, N-terminal domain BI316_05385 PF02769 AIR synthase related protein, C-terminal domain BI316_05410 PF03814 Potassium-transporting ATPase A subunit BI316_05420 PF02669 K+-transporting ATPase, c chain BI316_05425 PF02702 Osmosensitive K+ channel His kinase sensor domain BI316_05425 PF00512 His Kinase A (phospho-acceptor) domain BI316_05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_05425 PF13492 GAF domain BI316_05425 PF13493 Domain of unknown function (DUF4118) BI316_05430 PF00486 Transcriptional regulatory protein, C terminal BI316_05430 PF00072 Response regulator receiver domain BI316_05470 PF01565 FAD binding domain BI316_05470 PF02913 FAD linked oxidases, C-terminal domain BI316_05475 PF04307 LexA-binding, inner membrane-associated putative hydrolase BI316_05480 PF02021 Uncharacterised protein family UPF0102 BI316_05490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI316_05510 PF02381 MraZ protein, putative antitoxin-like BI316_05515 PF01795 MraW methylase family BI316_05520 PF04999 Cell division protein FtsL BI316_05525 PF03717 Penicillin-binding Protein dimerisation domain BI316_05525 PF00905 Penicillin binding protein transpeptidase domain BI316_05530 PF02875 Mur ligase family, glutamate ligase domain BI316_05530 PF01225 Mur ligase family, catalytic domain BI316_05530 PF08245 Mur ligase middle domain BI316_05535 PF08245 Mur ligase middle domain BI316_05535 PF01225 Mur ligase family, catalytic domain BI316_05535 PF02875 Mur ligase family, glutamate ligase domain BI316_05540 PF00953 Glycosyl transferase family 4 BI316_05545 PF01098 Cell cycle protein BI316_05550 PF03033 Glycosyltransferase family 28 N-terminal domain BI316_05550 PF04101 Glycosyltransferase family 28 C-terminal domain BI316_05555 PF01225 Mur ligase family, catalytic domain BI316_05555 PF08245 Mur ligase middle domain BI316_05555 PF02875 Mur ligase family, glutamate ligase domain BI316_05560 PF07478 D-ala D-ala ligase C-terminus BI316_05560 PF01820 D-ala D-ala ligase N-terminus BI316_05565 PF08478 POTRA domain, FtsQ-type BI316_05565 PF03799 Cell division protein FtsQ BI316_05570 PF02491 SHS2 domain inserted in FTSA BI316_05575 PF12327 FtsZ family, C-terminal domain BI316_05575 PF00091 Tubulin/FtsZ family, GTPase domain BI316_05580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BI316_05590 PF01476 LysM domain BI316_05590 PF01551 Peptidase family M23 BI316_05590 PF08525 Opacity-associated protein A N-terminal motif BI316_05595 PF07516 SecA Wing and Scaffold domain BI316_05595 PF01043 SecA preprotein cross-linking domain BI316_05595 PF02810 SEC-C motif BI316_05595 PF07517 SecA DEAD-like domain BI316_05600 PF00293 NUDIX domain BI316_05610 PF02219 Methylenetetrahydrofolate reductase BI316_05625 PF00698 Acyl transferase domain BI316_05625 PF14765 Polyketide synthase dehydratase BI316_05625 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_05625 PF00550 Phosphopantetheine attachment site BI316_05625 PF16197 Ketoacyl-synthetase C-terminal extension BI316_05625 PF08659 KR domain BI316_05625 PF08240 Alcohol dehydrogenase GroES-like domain BI316_05625 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_05625 PF00107 Zinc-binding dehydrogenase BI316_05630 PF00082 Subtilase family BI316_05630 PF09286 Pro-kumamolisin, activation domain BI316_05650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI316_05655 PF00128 Alpha amylase, catalytic domain BI316_05690 PF13649 Methyltransferase domain BI316_05695 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BI316_05695 PF05221 S-adenosyl-L-homocysteine hydrolase BI316_05710 PF00311 Phosphoenolpyruvate carboxylase BI316_05745 PF00328 Histidine phosphatase superfamily (branch 2) BI316_05755 PF02773 S-adenosylmethionine synthetase, C-terminal domain BI316_05755 PF02772 S-adenosylmethionine synthetase, central domain BI316_05755 PF00438 S-adenosylmethionine synthetase, N-terminal domain BI316_05765 PF13649 Methyltransferase domain BI316_05770 PF01207 Dihydrouridine synthase (Dus) BI316_05780 PF00294 pfkB family carbohydrate kinase BI316_05785 PF07670 Nucleoside recognition BI316_05785 PF01773 Na+ dependent nucleoside transporter N-terminus BI316_05785 PF07662 Na+ dependent nucleoside transporter C-terminus BI316_05795 PF00248 Aldo/keto reductase family BI316_05805 PF07715 TonB-dependent Receptor Plug Domain BI316_05805 PF00593 TonB dependent receptor BI316_05825 PF00528 Binding-protein-dependent transport system inner membrane component BI316_05830 PF00005 ABC transporter BI316_05840 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BI316_05850 PF00005 ABC transporter BI316_05855 PF13472 GDSL-like Lipase/Acylhydrolase family BI316_05860 PF00072 Response regulator receiver domain BI316_05860 PF00486 Transcriptional regulatory protein, C terminal BI316_05865 PF08521 Two-component sensor kinase N-terminal BI316_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_05865 PF00512 His Kinase A (phospho-acceptor) domain BI316_05880 PF01219 Prokaryotic diacylglycerol kinase BI316_05900 PF01790 Prolipoprotein diacylglyceryl transferase BI316_05905 PF00303 Thymidylate synthase BI316_05915 PF00186 Dihydrofolate reductase BI316_05920 PF00158 Sigma-54 interaction domain BI316_05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_05925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BI316_05930 PF00005 ABC transporter BI316_05935 PF00528 Binding-protein-dependent transport system inner membrane component BI316_05945 PF00296 Luciferase-like monooxygenase BI316_05950 PF03358 NADPH-dependent FMN reductase BI316_05970 PF00296 Luciferase-like monooxygenase BI316_05975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BI316_05980 PF00528 Binding-protein-dependent transport system inner membrane component BI316_05990 PF00005 ABC transporter BI316_05990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BI316_05995 PF00149 Calcineurin-like phosphoesterase BI316_06000 PF04379 ApaG domain BI316_06005 PF00398 Ribosomal RNA adenine dimethylase BI316_06010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BI316_06015 PF00639 PPIC-type PPIASE domain BI316_06015 PF09312 SurA N-terminal domain BI316_06020 PF03968 OstA-like protein BI316_06020 PF04453 LPS transport system D BI316_06035 PF00850 Histone deacetylase domain BI316_06040 PF01923 Cobalamin adenosyltransferase BI316_06055 PF01494 FAD binding domain BI316_06060 PF01494 FAD binding domain BI316_06080 PF07729 FCD domain BI316_06080 PF00392 Bacterial regulatory proteins, gntR family BI316_06085 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI316_06090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI316_06090 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BI316_06095 PF03466 LysR substrate binding domain BI316_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_06100 PF00501 AMP-binding enzyme BI316_06100 PF13193 AMP-binding enzyme C-terminal domain BI316_06105 PF00171 Aldehyde dehydrogenase family BI316_06110 PF00378 Enoyl-CoA hydratase/isomerase BI316_06130 PF08450 SMP-30/Gluconolactonase/LRE-like region BI316_06135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI316_06135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI316_06145 PF01728 FtsJ-like methyltransferase BI316_06145 PF18125 RlmM ferredoxin-like domain BI316_06170 PF00892 EamA-like transporter family BI316_06180 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI316_06180 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BI316_06195 PF00072 Response regulator receiver domain BI316_06195 PF00990 Diguanylate cyclase, GGDEF domain BI316_06200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI316_06200 PF00072 Response regulator receiver domain BI316_06200 PF00672 HAMP domain BI316_06200 PF01627 Hpt domain BI316_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_06200 PF00512 His Kinase A (phospho-acceptor) domain BI316_06205 PF00196 Bacterial regulatory proteins, luxR family BI316_06205 PF00072 Response regulator receiver domain BI316_06215 PF01625 Peptide methionine sulfoxide reductase BI316_06225 PF00923 Transaldolase/Fructose-6-phosphate aldolase BI316_06230 PF14760 Rnk N-terminus BI316_06230 PF01272 Transcription elongation factor, GreA/GreB, C-term BI316_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_06240 PF03466 LysR substrate binding domain BI316_06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_06245 PF13192 Thioredoxin domain BI316_06250 PF10417 C-terminal domain of 1-Cys peroxiredoxin BI316_06250 PF00578 AhpC/TSA family BI316_06255 PF17827 PrmC N-terminal domain BI316_06255 PF05175 Methyltransferase small domain BI316_06260 PF00561 alpha/beta hydrolase fold BI316_06270 PF00293 NUDIX domain BI316_06275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI316_06275 PF00476 DNA polymerase family A BI316_06275 PF01612 3'-5' exonuclease BI316_06275 PF01367 5'-3' exonuclease, C-terminal SAM fold BI316_06305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BI316_06305 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI316_06305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BI316_06330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI316_06335 PF02233 NAD(P) transhydrogenase beta subunit BI316_06350 PF01063 Amino-transferase class IV BI316_06355 PF00082 Subtilase family BI316_06355 PF04151 Bacterial pre-peptidase C-terminal domain BI316_06360 PF04151 Bacterial pre-peptidase C-terminal domain BI316_06360 PF00082 Subtilase family BI316_06365 PF04151 Bacterial pre-peptidase C-terminal domain BI316_06365 PF00082 Subtilase family BI316_06370 PF04073 Aminoacyl-tRNA editing domain BI316_06390 PF03358 NADPH-dependent FMN reductase BI316_06395 PF03631 Virulence factor BrkB BI316_06400 PF08534 Redoxin BI316_06415 PF03976 Polyphosphate kinase 2 (PPK2) BI316_06420 PF00994 Probable molybdopterin binding domain BI316_06430 PF00472 RF-1 domain BI316_06430 PF03462 PCRF domain BI316_06445 PF03550 Outer membrane lipoprotein LolB BI316_06450 PF00288 GHMP kinases N terminal domain BI316_06450 PF08544 GHMP kinases C terminal BI316_06460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BI316_06460 PF14572 Phosphoribosyl synthetase-associated domain BI316_06465 PF01386 Ribosomal L25p family BI316_06465 PF14693 Ribosomal protein TL5, C-terminal domain BI316_06470 PF01195 Peptidyl-tRNA hydrolase BI316_06475 PF01926 50S ribosome-binding GTPase BI316_06475 PF06071 Protein of unknown function (DUF933) BI316_06495 PF00009 Elongation factor Tu GTP binding domain BI316_06495 PF03144 Elongation factor Tu domain 2 BI316_06495 PF03143 Elongation factor Tu C-terminal domain BI316_06505 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BI316_06510 PF00467 KOW motif BI316_06510 PF02357 Transcription termination factor nusG BI316_06515 PF03946 Ribosomal protein L11, N-terminal domain BI316_06515 PF00298 Ribosomal protein L11, RNA binding domain BI316_06520 PF00687 Ribosomal protein L1p/L10e family BI316_06525 PF00466 Ribosomal protein L10 BI316_06530 PF16320 Ribosomal protein L7/L12 dimerisation domain BI316_06530 PF00542 Ribosomal protein L7/L12 C-terminal domain BI316_06535 PF00562 RNA polymerase Rpb2, domain 6 BI316_06535 PF04560 RNA polymerase Rpb2, domain 7 BI316_06535 PF10385 RNA polymerase beta subunit external 1 domain BI316_06535 PF04565 RNA polymerase Rpb2, domain 3 BI316_06535 PF04561 RNA polymerase Rpb2, domain 2 BI316_06535 PF04563 RNA polymerase beta subunit BI316_06540 PF04998 RNA polymerase Rpb1, domain 5 BI316_06540 PF05000 RNA polymerase Rpb1, domain 4 BI316_06540 PF04983 RNA polymerase Rpb1, domain 3 BI316_06540 PF00623 RNA polymerase Rpb1, domain 2 BI316_06540 PF04997 RNA polymerase Rpb1, domain 1 BI316_06545 PF00164 Ribosomal protein S12/S23 BI316_06550 PF00177 Ribosomal protein S7p/S5e BI316_06555 PF03144 Elongation factor Tu domain 2 BI316_06555 PF14492 Elongation Factor G, domain II BI316_06555 PF00679 Elongation factor G C-terminus BI316_06555 PF00009 Elongation factor Tu GTP binding domain BI316_06555 PF03764 Elongation factor G, domain IV BI316_06560 PF00009 Elongation factor Tu GTP binding domain BI316_06560 PF03144 Elongation factor Tu domain 2 BI316_06560 PF03143 Elongation factor Tu C-terminal domain BI316_06565 PF00338 Ribosomal protein S10p/S20e BI316_06570 PF00297 Ribosomal protein L3 BI316_06575 PF00573 Ribosomal protein L4/L1 family BI316_06580 PF00276 Ribosomal protein L23 BI316_06585 PF00181 Ribosomal Proteins L2, RNA binding domain BI316_06585 PF03947 Ribosomal Proteins L2, C-terminal domain BI316_06590 PF00203 Ribosomal protein S19 BI316_06595 PF00237 Ribosomal protein L22p/L17e BI316_06600 PF00189 Ribosomal protein S3, C-terminal domain BI316_06600 PF07650 KH domain BI316_06605 PF00252 Ribosomal protein L16p/L10e BI316_06610 PF00831 Ribosomal L29 protein BI316_06615 PF00366 Ribosomal protein S17 BI316_06620 PF00238 Ribosomal protein L14p/L23e BI316_06625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BI316_06625 PF00467 KOW motif BI316_06630 PF00281 Ribosomal protein L5 BI316_06630 PF00673 ribosomal L5P family C-terminus BI316_06635 PF00253 Ribosomal protein S14p/S29e BI316_06640 PF00410 Ribosomal protein S8 BI316_06645 PF00347 Ribosomal protein L6 BI316_06650 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BI316_06655 PF00333 Ribosomal protein S5, N-terminal domain BI316_06655 PF03719 Ribosomal protein S5, C-terminal domain BI316_06660 PF00327 Ribosomal protein L30p/L7e BI316_06665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BI316_06670 PF00344 SecY translocase BI316_06675 PF00416 Ribosomal protein S13/S18 BI316_06680 PF00411 Ribosomal protein S11 BI316_06685 PF01479 S4 domain BI316_06685 PF00163 Ribosomal protein S4/S9 N-terminal domain BI316_06690 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BI316_06690 PF01000 RNA polymerase Rpb3/RpoA insert domain BI316_06690 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BI316_06695 PF01196 Ribosomal protein L17 BI316_06700 PF02600 Disulfide bond formation protein DsbB BI316_06720 PF01474 Class-II DAHP synthetase family BI316_06730 PF01425 Amidase BI316_06745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI316_06750 PF00056 lactate/malate dehydrogenase, NAD binding domain BI316_06750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BI316_06755 PF02798 Glutathione S-transferase, N-terminal domain BI316_06755 PF00043 Glutathione S-transferase, C-terminal domain BI316_06770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI316_06770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_06775 PF08240 Alcohol dehydrogenase GroES-like domain BI316_06775 PF00107 Zinc-binding dehydrogenase BI316_06785 PF00691 OmpA family BI316_06785 PF05736 OprF membrane domain BI316_06795 PF00849 RNA pseudouridylate synthase BI316_06805 PF00155 Aminotransferase class I and II BI316_06815 PF00528 Binding-protein-dependent transport system inner membrane component BI316_06820 PF00528 Binding-protein-dependent transport system inner membrane component BI316_06825 PF17850 CysA C-terminal regulatory domain BI316_06825 PF12857 TOBE-like domain BI316_06825 PF00005 ABC transporter BI316_06835 PF00107 Zinc-binding dehydrogenase BI316_06835 PF08240 Alcohol dehydrogenase GroES-like domain BI316_06850 PF05506 Domain of unknown function (DUF756) BI316_06850 PF04185 Phosphoesterase family BI316_06855 PF10459 Peptidase S46 BI316_06860 PF10459 Peptidase S46 BI316_06865 PF00300 Histidine phosphatase superfamily (branch 1) BI316_06870 PF08245 Mur ligase middle domain BI316_06870 PF02875 Mur ligase family, glutamate ligase domain BI316_06885 PF00156 Phosphoribosyl transferase domain BI316_06890 PF04305 Protein of unknown function (DUF455) BI316_06910 PF00149 Calcineurin-like phosphoesterase BI316_06915 PF01569 PAP2 superfamily BI316_06920 PF00534 Glycosyl transferases group 1 BI316_06920 PF13439 Glycosyltransferase Family 4 BI316_06925 PF02541 Ppx/GppA phosphatase family BI316_06930 PF13089 Polyphosphate kinase N-terminal domain BI316_06930 PF17941 Polyphosphate kinase C-terminal domain 1 BI316_06930 PF13090 Polyphosphate kinase C-terminal domain 2 BI316_06930 PF02503 Polyphosphate kinase middle domain BI316_06935 PF11808 Phosphate regulon sensor protein PhoR BI316_06935 PF00512 His Kinase A (phospho-acceptor) domain BI316_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_06935 PF00989 PAS fold BI316_06940 PF00072 Response regulator receiver domain BI316_06940 PF00486 Transcriptional regulatory protein, C terminal BI316_06945 PF01435 Peptidase family M48 BI316_06945 PF13181 Tetratricopeptide repeat BI316_06950 PF00462 Glutaredoxin BI316_06960 PF00180 Isocitrate/isopropylmalate dehydrogenase BI316_07120 PF05697 Bacterial trigger factor protein (TF) BI316_07120 PF05698 Bacterial trigger factor protein (TF) C-terminus BI316_07125 PF00574 Clp protease BI316_07130 PF06689 ClpX C4-type zinc finger BI316_07130 PF07724 AAA domain (Cdc48 subfamily) BI316_07130 PF10431 C-terminal, D2-small domain, of ClpB protein BI316_07135 PF05362 Lon protease (S16) C-terminal proteolytic domain BI316_07135 PF00004 ATPase family associated with various cellular activities (AAA) BI316_07135 PF02190 ATP-dependent protease La (LON) substrate-binding domain BI316_07140 PF00216 Bacterial DNA-binding protein BI316_07160 PF01476 LysM domain BI316_07160 PF05257 CHAP domain BI316_07165 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI316_07165 PF00753 Metallo-beta-lactamase superfamily BI316_07175 PF00075 RNase H BI316_07180 PF00929 Exonuclease BI316_07200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BI316_07210 PF00753 Metallo-beta-lactamase superfamily BI316_07210 PF12706 Beta-lactamase superfamily domain BI316_07215 PF06463 Molybdenum Cofactor Synthesis C BI316_07215 PF04055 Radical SAM superfamily BI316_07225 PF01967 MoaC family BI316_07230 PF02597 ThiS family BI316_07235 PF02391 MoaE protein BI316_07285 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BI316_07285 PF12169 DNA polymerase III subunits gamma and tau domain III BI316_07285 PF12170 DNA polymerase III tau subunit V interacting with alpha BI316_07290 PF02575 YbaB/EbfC DNA-binding family BI316_07295 PF02132 RecR protein BI316_07295 PF13662 Toprim domain BI316_07300 PF01230 HIT domain BI316_07310 PF11992 Domain of unknown function (DUF3488) BI316_07310 PF13559 Domain of unknown function (DUF4129) BI316_07310 PF01841 Transglutaminase-like superfamily BI316_07320 PF17863 AAA lid domain BI316_07320 PF07726 ATPase family associated with various cellular activities (AAA) BI316_07345 PF02545 Maf-like protein BI316_07350 PF02620 Large ribosomal RNA subunit accumulation protein YceD BI316_07355 PF01783 Ribosomal L32p protein family BI316_07360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI316_07360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI316_07370 PF00698 Acyl transferase domain BI316_07380 PF00550 Phosphopantetheine attachment site BI316_07385 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_07385 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_07390 PF00425 chorismate binding enzyme BI316_07390 PF04715 Anthranilate synthase component I, N terminal region BI316_07395 PF02618 YceG-like family BI316_07400 PF09115 DNA polymerase III, delta subunit, C terminal BI316_07420 PF02954 Bacterial regulatory protein, Fis family BI316_07420 PF00158 Sigma-54 interaction domain BI316_07420 PF06506 Propionate catabolism activator BI316_07430 PF00285 Citrate synthase, C-terminal domain BI316_07435 PF00330 Aconitase family (aconitate hydratase) BI316_07435 PF00694 Aconitase C-terminal domain BI316_07440 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BI316_07450 PF04303 PrpF protein BI316_07455 PF00593 TonB dependent receptor BI316_07455 PF07715 TonB-dependent Receptor Plug Domain BI316_07470 PF01835 MG2 domain BI316_07470 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BI316_07470 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BI316_07470 PF07703 Alpha-2-macroglobulin bait region domain BI316_07470 PF17962 Bacterial macroglobulin domain 6 BI316_07470 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BI316_07470 PF00207 Alpha-2-macroglobulin family BI316_07470 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BI316_07490 PF06832 Penicillin-Binding Protein C-terminus Family BI316_07490 PF00912 Transglycosylase BI316_07490 PF00905 Penicillin binding protein transpeptidase domain BI316_07500 PF08534 Redoxin BI316_07510 PF00226 DnaJ domain BI316_07510 PF01556 DnaJ C terminal domain BI316_07515 PF00072 Response regulator receiver domain BI316_07520 PF12221 Bacterial membrane protein N terminal BI316_07520 PF01145 SPFH domain / Band 7 family BI316_07525 PF01145 SPFH domain / Band 7 family BI316_07540 PF00709 Adenylosuccinate synthetase BI316_07545 PF11838 ERAP1-like C-terminal domain BI316_07545 PF01433 Peptidase family M1 domain BI316_07555 PF00440 Bacterial regulatory proteins, tetR family BI316_07600 PF18766 SWI2/SNF2 ATPase BI316_07600 PF11867 Domain of unknown function (DUF3387) BI316_07600 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BI316_07630 PF00300 Histidine phosphatase superfamily (branch 1) BI316_07630 PF13456 Reverse transcriptase-like BI316_07635 PF01256 Carbohydrate kinase BI316_07645 PF00723 Glycosyl hydrolases family 15 BI316_07660 PF07971 Glycosyl hydrolase family 92 BI316_07660 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI316_07680 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_07700 PF17755 UvrA DNA-binding domain BI316_07705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI316_07705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI316_07710 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI316_07710 PF00941 FAD binding domain in molybdopterin dehydrogenase BI316_07715 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI316_07715 PF00111 2Fe-2S iron-sulfur cluster binding domain BI316_07715 PF01799 [2Fe-2S] binding domain BI316_07750 PF00717 Peptidase S24-like BI316_07750 PF01726 LexA DNA binding domain BI316_07765 PF02811 PHP domain BI316_07765 PF14579 Helix-hairpin-helix motif BI316_07765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI316_07765 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI316_07775 PF00326 Prolyl oligopeptidase family BI316_07785 PF03169 OPT oligopeptide transporter protein BI316_07800 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI316_07800 PF07676 WD40-like Beta Propeller Repeat BI316_07800 PF00326 Prolyl oligopeptidase family BI316_07820 PF02311 AraC-like ligand binding domain BI316_07820 PF12833 Helix-turn-helix domain BI316_07835 PF06628 Catalase-related immune-responsive BI316_07835 PF18011 C-terminal domain found in long catalases BI316_07835 PF00199 Catalase BI316_07840 PF00248 Aldo/keto reductase family BI316_07845 PF00135 Carboxylesterase family BI316_07850 PF02347 Glycine cleavage system P-protein BI316_07855 PF07690 Major Facilitator Superfamily BI316_07870 PF00884 Sulfatase BI316_07870 PF08019 Phosphoethanolamine transferase EptA/EptB BI316_07885 PF00486 Transcriptional regulatory protein, C terminal BI316_07885 PF00072 Response regulator receiver domain BI316_07890 PF08521 Two-component sensor kinase N-terminal BI316_07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_07890 PF00512 His Kinase A (phospho-acceptor) domain BI316_07900 PF03776 Septum formation topological specificity factor MinE BI316_07905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI316_07910 PF03775 Septum formation inhibitor MinC, C-terminal domain BI316_07910 PF05209 Septum formation inhibitor MinC, N-terminal domain BI316_07925 PF07730 Histidine kinase BI316_07930 PF00196 Bacterial regulatory proteins, luxR family BI316_07930 PF00072 Response regulator receiver domain BI316_07945 PF00730 HhH-GPD superfamily base excision DNA repair protein BI316_07975 PF02222 ATP-grasp domain BI316_07985 PF04377 Arginine-tRNA-protein transferase, C terminus BI316_07985 PF04376 Arginine-tRNA-protein transferase, N terminus BI316_08010 PF00378 Enoyl-CoA hydratase/isomerase BI316_08025 PF00005 ABC transporter BI316_08025 PF17755 UvrA DNA-binding domain BI316_08025 PF17760 UvrA interaction domain BI316_08030 PF00829 Ribosomal prokaryotic L21 protein BI316_08035 PF01016 Ribosomal L27 protein BI316_08040 PF01018 GTP1/OBG BI316_08040 PF01926 50S ribosome-binding GTPase BI316_08045 PF01649 Ribosomal protein S20 BI316_08050 PF03023 Lipid II flippase MurJ BI316_08055 PF01687 Riboflavin kinase BI316_08055 PF06574 FAD synthetase BI316_08060 PF08264 Anticodon-binding domain of tRNA BI316_08060 PF00133 tRNA synthetases class I (I, L, M and V) BI316_08060 PF06827 Zinc finger found in FPG and IleRS BI316_08065 PF01252 Signal peptidase (SPase) II BI316_08070 PF02401 LytB protein BI316_08085 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI316_08090 PF00510 Cytochrome c oxidase subunit III BI316_08095 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BI316_08105 PF18073 Rubredoxin metal binding domain BI316_08110 PF05656 Protein of unknown function (DUF805) BI316_08120 PF12833 Helix-turn-helix domain BI316_08125 PF00183 Hsp90 protein BI316_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08140 PF01740 STAS domain BI316_08140 PF08678 Rsbr N terminal BI316_08145 PF01740 STAS domain BI316_08150 PF13581 Histidine kinase-like ATPase domain BI316_08160 PF17149 Periplasmic sensor domain found in signal transduction proteins BI316_08160 PF00072 Response regulator receiver domain BI316_08160 PF00512 His Kinase A (phospho-acceptor) domain BI316_08160 PF01627 Hpt domain BI316_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08160 PF00672 HAMP domain BI316_08165 PF00072 Response regulator receiver domain BI316_08165 PF00512 His Kinase A (phospho-acceptor) domain BI316_08165 PF08448 PAS fold BI316_08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08165 PF13188 PAS domain BI316_08175 PF00593 TonB dependent receptor BI316_08175 PF07715 TonB-dependent Receptor Plug Domain BI316_08180 PF00085 Thioredoxin BI316_08185 PF07237 Protein of unknown function (DUF1428) BI316_08190 PF02702 Osmosensitive K+ channel His kinase sensor domain BI316_08190 PF00512 His Kinase A (phospho-acceptor) domain BI316_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08190 PF13492 GAF domain BI316_08190 PF13493 Domain of unknown function (DUF4118) BI316_08195 PF01339 CheB methylesterase BI316_08200 PF03705 CheR methyltransferase, all-alpha domain BI316_08200 PF01739 CheR methyltransferase, SAM binding domain BI316_08205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI316_08205 PF00072 Response regulator receiver domain BI316_08205 PF01627 Hpt domain BI316_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08205 PF00512 His Kinase A (phospho-acceptor) domain BI316_08205 PF00672 HAMP domain BI316_08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_08210 PF00072 Response regulator receiver domain BI316_08210 PF13426 PAS domain BI316_08215 PF00072 Response regulator receiver domain BI316_08220 PF00722 Glycosyl hydrolases family 16 BI316_08225 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BI316_08230 PF01263 Aldose 1-epimerase BI316_08235 PF01578 Cytochrome C assembly protein BI316_08240 PF02881 SRP54-type protein, helical bundle domain BI316_08240 PF00448 SRP54-type protein, GTPase domain BI316_08240 PF02978 Signal peptide binding domain BI316_08245 PF03060 Nitronate monooxygenase BI316_08250 PF01063 Amino-transferase class IV BI316_08255 PF00886 Ribosomal protein S16 BI316_08260 PF01782 RimM N-terminal domain BI316_08260 PF05239 PRC-barrel domain BI316_08265 PF01746 tRNA (Guanine-1)-methyltransferase BI316_08270 PF01245 Ribosomal protein L19 BI316_08290 PF01479 S4 domain BI316_08295 PF00141 Peroxidase BI316_08305 PF05188 MutS domain II BI316_08305 PF00488 MutS domain V BI316_08305 PF05190 MutS family domain IV BI316_08305 PF01624 MutS domain I BI316_08305 PF05192 MutS domain III BI316_08325 PF05593 RHS Repeat BI316_08325 PF03527 RHS protein BI316_08350 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI316_08350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI316_08350 PF00703 Glycosyl hydrolases family 2 BI316_08350 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI316_08350 PF16355 Domain of unknown function (DUF4982) BI316_08355 PF07745 Glycosyl hydrolase family 53 BI316_08365 PF01381 Helix-turn-helix BI316_08365 PF09856 Predicted transcriptional regulator (DUF2083) BI316_08365 PF06114 IrrE N-terminal-like domain BI316_08370 PF00171 Aldehyde dehydrogenase family BI316_08375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_08375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_08375 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_08380 PF00378 Enoyl-CoA hydratase/isomerase BI316_08385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI316_08385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI316_08385 PF00378 Enoyl-CoA hydratase/isomerase BI316_08390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI316_08390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI316_08395 PF01545 Cation efflux family BI316_08400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI316_08400 PF00378 Enoyl-CoA hydratase/isomerase BI316_08400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI316_08405 PF04542 Sigma-70 region 2 BI316_08405 PF08281 Sigma-70, region 4 BI316_08415 PF13180 PDZ domain BI316_08420 PF00679 Elongation factor G C-terminus BI316_08420 PF06421 GTP-binding protein LepA C-terminus BI316_08420 PF03144 Elongation factor Tu domain 2 BI316_08420 PF00009 Elongation factor Tu GTP binding domain BI316_08425 PF10502 Signal peptidase, peptidase S26 BI316_08435 PF14622 Ribonuclease-III-like BI316_08435 PF00035 Double-stranded RNA binding motif BI316_08440 PF01926 50S ribosome-binding GTPase BI316_08440 PF07650 KH domain BI316_08445 PF02565 Recombination protein O C terminal BI316_08445 PF11967 Recombination protein O N terminal BI316_08455 PF05958 tRNA (Uracil-5-)-methyltransferase BI316_08465 PF01323 DSBA-like thioredoxin domain BI316_08470 PF01593 Flavin containing amine oxidoreductase BI316_08475 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BI316_08480 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_08490 PF01048 Phosphorylase superfamily BI316_08495 PF00313 'Cold-shock' DNA-binding domain BI316_08500 PF01494 FAD binding domain BI316_08510 PF00270 DEAD/DEAH box helicase BI316_08510 PF00271 Helicase conserved C-terminal domain BI316_08510 PF08494 DEAD/H associated BI316_08515 PF04679 ATP dependent DNA ligase C terminal region BI316_08515 PF01068 ATP dependent DNA ligase domain BI316_08515 PF04675 DNA ligase N terminus BI316_08525 PF04679 ATP dependent DNA ligase C terminal region BI316_08525 PF04675 DNA ligase N terminus BI316_08525 PF01068 ATP dependent DNA ligase domain BI316_08540 PF00990 Diguanylate cyclase, GGDEF domain BI316_08540 PF00072 Response regulator receiver domain BI316_08560 PF00108 Thiolase, N-terminal domain BI316_08560 PF02803 Thiolase, C-terminal domain BI316_08565 PF12951 Passenger-associated-transport-repeat BI316_08565 PF03797 Autotransporter beta-domain BI316_08565 PF00082 Subtilase family BI316_08570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BI316_08570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BI316_08585 PF01863 Protein of unknown function DUF45 BI316_08590 PF07043 Protein of unknown function (DUF1328) BI316_08600 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI316_08620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI316_08630 PF03831 PhnA domain BI316_08630 PF08274 PhnA Zinc-Ribbon BI316_08640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI316_08645 PF07690 Major Facilitator Superfamily BI316_08680 PF03706 Lysylphosphatidylglycerol synthase TM region BI316_08680 PF09924 Uncharacterised conserved protein (DUF2156) BI316_08690 PF01042 Endoribonuclease L-PSP BI316_08735 PF04545 Sigma-70, region 4 BI316_08735 PF04542 Sigma-70 region 2 BI316_08755 PF04060 Putative Fe-S cluster BI316_08765 PF01588 Putative tRNA binding domain BI316_08765 PF09334 tRNA synthetases class I (M) BI316_08780 PF00005 ABC transporter BI316_08780 PF13732 Domain of unknown function (DUF4162) BI316_08785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI316_08790 PF00324 Amino acid permease BI316_08795 PF02574 Homocysteine S-methyltransferase BI316_08805 PF02592 Putative vitamin uptake transporter BI316_08825 PF03551 Transcriptional regulator PadR-like family BI316_08860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BI316_08865 PF02811 PHP domain BI316_08865 PF01336 OB-fold nucleic acid binding domain BI316_08865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI316_08865 PF14579 Helix-hairpin-helix motif BI316_08865 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI316_08870 PF01351 Ribonuclease HII BI316_08875 PF02684 Lipid-A-disaccharide synthetase BI316_08880 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BI316_08880 PF00132 Bacterial transferase hexapeptide (six repeats) BI316_08885 PF07977 FabA-like domain BI316_08890 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BI316_08890 PF00132 Bacterial transferase hexapeptide (six repeats) BI316_08900 PF01103 Surface antigen BI316_08900 PF07244 Surface antigen variable number repeat BI316_08905 PF17820 PDZ domain BI316_08905 PF02163 Peptidase family M50 BI316_08910 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BI316_08910 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BI316_08910 PF13288 DXP reductoisomerase C-terminal domain BI316_08920 PF01255 Putative undecaprenyl diphosphate synthase BI316_08925 PF01765 Ribosome recycling factor BI316_08930 PF00696 Amino acid kinase family BI316_08935 PF00072 Response regulator receiver domain BI316_08935 PF00990 Diguanylate cyclase, GGDEF domain BI316_08940 PF00889 Elongation factor TS BI316_08945 PF00318 Ribosomal protein S2 BI316_08980 PF00557 Metallopeptidase family M24 BI316_08985 PF01909 Nucleotidyltransferase domain BI316_08985 PF01966 HD domain BI316_08985 PF08335 GlnD PII-uridylyltransferase BI316_08990 PF00132 Bacterial transferase hexapeptide (six repeats) BI316_08990 PF14602 Hexapeptide repeat of succinyl-transferase BI316_08990 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BI316_08995 PF03960 ArsC family BI316_09000 PF01546 Peptidase family M20/M25/M40 BI316_09000 PF07687 Peptidase dimerisation domain BI316_09005 PF13537 Glutamine amidotransferase domain BI316_09005 PF00733 Asparagine synthase BI316_09015 PF07715 TonB-dependent Receptor Plug Domain BI316_09015 PF00593 TonB dependent receptor BI316_09025 PF01804 Penicillin amidase BI316_09030 PF00210 Ferritin-like domain BI316_09035 PF05724 Thiopurine S-methyltransferase (TPMT) BI316_09045 PF00521 DNA gyrase/topoisomerase IV, subunit A BI316_09045 PF03989 DNA gyrase C-terminal domain, beta-propeller BI316_09060 PF02321 Outer membrane efflux protein BI316_09065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_09065 PF00529 HlyD membrane-fusion protein of T1SS BI316_09070 PF07690 Major Facilitator Superfamily BI316_09080 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_09080 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI316_09080 PF14310 Fibronectin type III-like domain BI316_09090 PF00854 POT family BI316_09115 PF12802 MarR family BI316_09120 PF01432 Peptidase family M3 BI316_09130 PF00255 Glutathione peroxidase BI316_09135 PF00970 Oxidoreductase FAD-binding domain BI316_09135 PF00175 Oxidoreductase NAD-binding domain BI316_09140 PF00005 ABC transporter BI316_09145 PF05681 Fumarate hydratase (Fumerase) BI316_09145 PF05683 Fumarase C-terminus BI316_09155 PF00484 Carbonic anhydrase BI316_09160 PF02253 Phospholipase A1 BI316_09170 PF00313 'Cold-shock' DNA-binding domain BI316_09185 PF00899 ThiF family BI316_09205 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_09205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_09205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_09215 PF00043 Glutathione S-transferase, C-terminal domain BI316_09215 PF02798 Glutathione S-transferase, N-terminal domain BI316_09225 PF00733 Asparagine synthase BI316_09225 PF13537 Glutamine amidotransferase domain BI316_09230 PF03358 NADPH-dependent FMN reductase BI316_09235 PF03796 DnaB-like helicase C terminal domain BI316_09235 PF00772 DnaB-like helicase N terminal domain BI316_09240 PF03441 FAD binding domain of DNA photolyase BI316_09240 PF00875 DNA photolyase BI316_09250 PF05736 OprF membrane domain BI316_09250 PF00691 OmpA family BI316_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_09265 PF03466 LysR substrate binding domain BI316_09280 PF00529 HlyD membrane-fusion protein of T1SS BI316_09280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_09285 PF00873 AcrB/AcrD/AcrF family BI316_09290 PF00106 short chain dehydrogenase BI316_09295 PF02321 Outer membrane efflux protein BI316_09300 PF00990 Diguanylate cyclase, GGDEF domain BI316_09300 PF08448 PAS fold BI316_09310 PF00990 Diguanylate cyclase, GGDEF domain BI316_09430 PF00082 Subtilase family BI316_09435 PF01668 SmpB protein BI316_09440 PF03364 Polyketide cyclase / dehydrase and lipid transport BI316_09445 PF03658 RnfH family Ubiquitin BI316_09450 PF04355 SmpA / OmlA family BI316_09455 PF01475 Ferric uptake regulator family BI316_09460 PF02463 RecF/RecN/SMC N terminal domain BI316_09465 PF01628 HrcA protein C terminal domain BI316_09465 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BI316_09470 PF01025 GrpE BI316_09475 PF00012 Hsp70 protein BI316_09480 PF00684 DnaJ central domain BI316_09480 PF01556 DnaJ C terminal domain BI316_09480 PF00226 DnaJ domain BI316_09490 PF08543 Phosphomethylpyrimidine kinase BI316_09515 PF03412 Peptidase C39 family BI316_09515 PF00005 ABC transporter BI316_09515 PF00664 ABC transporter transmembrane region BI316_09520 PF03466 LysR substrate binding domain BI316_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_09525 PF00005 ABC transporter BI316_09525 PF00664 ABC transporter transmembrane region BI316_09530 PF01205 Uncharacterized protein family UPF0029 BI316_09535 PF03641 Possible lysine decarboxylase BI316_09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_09540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI316_09545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI316_09545 PF00364 Biotin-requiring enzyme BI316_09545 PF02817 e3 binding domain BI316_09550 PF02779 Transketolase, pyrimidine binding domain BI316_09550 PF16870 2-oxoglutarate dehydrogenase C-terminal BI316_09550 PF16078 2-oxoglutarate dehydrogenase N-terminus BI316_09550 PF00676 Dehydrogenase E1 component BI316_09560 PF08007 Cupin superfamily protein BI316_09570 PF08328 Adenylosuccinate lyase C-terminal BI316_09570 PF00206 Lyase BI316_09580 PF01595 Cyclin M transmembrane N-terminal domain BI316_09580 PF00571 CBS domain BI316_09580 PF03471 Transporter associated domain BI316_09585 PF10415 Fumarase C C-terminus BI316_09585 PF00206 Lyase BI316_09610 PF00005 ABC transporter BI316_09615 PF00392 Bacterial regulatory proteins, gntR family BI316_09625 PF00255 Glutathione peroxidase BI316_09630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI316_09630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI316_09635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI316_09635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI316_09635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI316_09640 PF04102 SlyX BI316_09655 PF00356 Bacterial regulatory proteins, lacI family BI316_09660 PF07690 Major Facilitator Superfamily BI316_09665 PF00294 pfkB family carbohydrate kinase BI316_09675 PF02310 B12 binding domain BI316_09675 PF02607 B12 binding domain BI316_09675 PF02965 Vitamin B12 dependent methionine synthase, activation domain BI316_09675 PF00809 Pterin binding enzyme BI316_09675 PF02574 Homocysteine S-methyltransferase BI316_09680 PF00809 Pterin binding enzyme BI316_09680 PF02574 Homocysteine S-methyltransferase BI316_09685 PF01209 ubiE/COQ5 methyltransferase family BI316_09690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_09690 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_09690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_09695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_09695 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_09695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_09700 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_09705 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_09705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_09705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_09725 PF08206 Ribonuclease B OB domain BI316_09725 PF00575 S1 RNA binding domain BI316_09725 PF17876 Cold shock domain BI316_09725 PF00773 RNB domain BI316_09725 PF08461 Ribonuclease R winged-helix domain BI316_09735 PF00588 SpoU rRNA Methylase family BI316_09735 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI316_09740 PF07694 5TMR of 5TMR-LYT BI316_09740 PF00990 Diguanylate cyclase, GGDEF domain BI316_09745 PF00929 Exonuclease BI316_09755 PF01895 PhoU domain BI316_09760 PF00005 ABC transporter BI316_09765 PF00528 Binding-protein-dependent transport system inner membrane component BI316_09770 PF00528 Binding-protein-dependent transport system inner membrane component BI316_09775 PF12849 PBP superfamily domain BI316_09780 PF12849 PBP superfamily domain BI316_09795 PF00484 Carbonic anhydrase BI316_09800 PF01740 STAS domain BI316_09800 PF00916 Sulfate permease family BI316_09805 PF10576 Iron-sulfur binding domain of endonuclease III BI316_09805 PF00633 Helix-hairpin-helix motif BI316_09805 PF00730 HhH-GPD superfamily base excision DNA repair protein BI316_09815 PF00378 Enoyl-CoA hydratase/isomerase BI316_09820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI316_09820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI316_09825 PF00293 NUDIX domain BI316_09830 PF00581 Rhodanese-like domain BI316_09875 PF01513 ATP-NAD kinase BI316_09900 PF00929 Exonuclease BI316_09900 PF08411 Exonuclease C-terminal BI316_09910 PF01494 FAD binding domain BI316_09915 PF00266 Aminotransferase class-V BI316_09925 PF06052 3-hydroxyanthranilic acid dioxygenase BI316_09930 PF00484 Carbonic anhydrase BI316_09975 PF00072 Response regulator receiver domain BI316_09975 PF00196 Bacterial regulatory proteins, luxR family BI316_09995 PF04299 Putative FMN-binding domain BI316_10015 PF01336 OB-fold nucleic acid binding domain BI316_10015 PF00152 tRNA synthetases class II (D, K and N) BI316_10025 PF01521 Iron-sulphur cluster biosynthesis BI316_10030 PF01250 Ribosomal protein S6 BI316_10035 PF01084 Ribosomal protein S18 BI316_10040 PF01281 Ribosomal protein L9, N-terminal domain BI316_10040 PF03948 Ribosomal protein L9, C-terminal domain BI316_10045 PF02463 RecF/RecN/SMC N terminal domain BI316_10050 PF04354 ZipA, C-terminal FtsZ-binding domain BI316_10060 PF00155 Aminotransferase class I and II BI316_10065 PF00533 BRCA1 C Terminus (BRCT) domain BI316_10065 PF12826 Helix-hairpin-helix motif BI316_10065 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BI316_10065 PF01653 NAD-dependent DNA ligase adenylation domain BI316_10065 PF03120 NAD-dependent DNA ligase OB-fold domain BI316_10070 PF00152 tRNA synthetases class II (D, K and N) BI316_10085 PF01008 Initiation factor 2 subunit family BI316_10090 PF00521 DNA gyrase/topoisomerase IV, subunit A BI316_10090 PF03989 DNA gyrase C-terminal domain, beta-propeller BI316_10095 PF13360 PQQ-like domain BI316_10110 PF17391 Urocanase N-terminal domain BI316_10110 PF17392 Urocanase C-terminal domain BI316_10110 PF01175 Urocanase Rossmann-like domain BI316_10120 PF00221 Aromatic amino acid lyase BI316_10125 PF07969 Amidohydrolase family BI316_10140 PF07702 UTRA domain BI316_10140 PF00392 Bacterial regulatory proteins, gntR family BI316_10170 PF01794 Ferric reductase like transmembrane component BI316_10175 PF00174 Oxidoreductase molybdopterin binding domain BI316_10180 PF00266 Aminotransferase class-V BI316_10185 PF00800 Prephenate dehydratase BI316_10185 PF01817 Chorismate mutase type II BI316_10185 PF01842 ACT domain BI316_10190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI316_10200 PF03544 Gram-negative bacterial TonB protein C-terminal BI316_10205 PF02403 Seryl-tRNA synthetase N-terminal domain BI316_10205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI316_10210 PF02525 Flavodoxin-like fold BI316_10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_10215 PF03466 LysR substrate binding domain BI316_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_10275 PF02203 Tar ligand binding domain homologue BI316_10275 PF00672 HAMP domain BI316_10295 PF13188 PAS domain BI316_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_10295 PF00512 His Kinase A (phospho-acceptor) domain BI316_10295 PF00072 Response regulator receiver domain BI316_10295 PF08448 PAS fold BI316_10300 PF00072 Response regulator receiver domain BI316_10300 PF00486 Transcriptional regulatory protein, C terminal BI316_10310 PF06745 KaiC BI316_10315 PF00072 Response regulator receiver domain BI316_10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_10315 PF13426 PAS domain BI316_10325 PF03918 Cytochrome C biogenesis protein BI316_10330 PF08534 Redoxin BI316_10335 PF01578 Cytochrome C assembly protein BI316_10335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI316_10340 PF03100 CcmE BI316_10350 PF01578 Cytochrome C assembly protein BI316_10355 PF00082 Subtilase family BI316_10365 PF08281 Sigma-70, region 4 BI316_10365 PF04542 Sigma-70 region 2 BI316_10380 PF00034 Cytochrome c BI316_10395 PF05523 WxcM-like, C-terminal BI316_10415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI316_10420 PF01943 Polysaccharide biosynthesis protein BI316_10425 PF00535 Glycosyl transferase family 2 BI316_10440 PF08241 Methyltransferase domain BI316_10465 PF13579 Glycosyl transferase 4-like domain BI316_10465 PF00534 Glycosyl transferases group 1 BI316_10480 PF00005 ABC transporter BI316_10485 PF00005 ABC transporter BI316_10485 PF00664 ABC transporter transmembrane region BI316_10490 PF07690 Major Facilitator Superfamily BI316_10495 PF00296 Luciferase-like monooxygenase BI316_10510 PF01595 Cyclin M transmembrane N-terminal domain BI316_10510 PF03471 Transporter associated domain BI316_10510 PF00571 CBS domain BI316_10525 PF01384 Phosphate transporter family BI316_10540 PF01751 Toprim domain BI316_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_10540 PF00986 DNA gyrase B subunit, carboxyl terminus BI316_10540 PF00204 DNA gyrase B BI316_10550 PF00117 Glutamine amidotransferase class-I BI316_10550 PF06418 CTP synthase N-terminus BI316_10555 PF00793 DAHP synthetase I family BI316_10565 PF03952 Enolase, N-terminal domain BI316_10565 PF00113 Enolase, C-terminal TIM barrel domain BI316_10570 PF04977 Septum formation initiator BI316_10575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BI316_10580 PF02542 YgbB family BI316_10585 PF01142 tRNA pseudouridine synthase D (TruD) BI316_10590 PF01713 Smr domain BI316_10595 PF01975 Survival protein SurE BI316_10605 PF09335 SNARE associated Golgi protein BI316_10610 PF01476 LysM domain BI316_10610 PF01551 Peptidase family M23 BI316_10615 PF04430 Protein of unknown function (DUF498/DUF598) BI316_10620 PF01985 CRS1 / YhbY (CRM) domain BI316_10625 PF01728 FtsJ-like methyltransferase BI316_10630 PF17862 AAA+ lid domain BI316_10630 PF01434 Peptidase family M41 BI316_10630 PF06480 FtsH Extracellular BI316_10630 PF00004 ATPase family associated with various cellular activities (AAA) BI316_10635 PF00809 Pterin binding enzyme BI316_10645 PF17209 Hfq protein BI316_10650 PF13167 GTP-binding GTPase N-terminal BI316_10650 PF16360 GTP-binding GTPase Middle Region BI316_10650 PF01926 50S ribosome-binding GTPase BI316_10655 PF02464 Competence-damaged protein BI316_10660 PF03109 ABC1 family BI316_10665 PF01726 LexA DNA binding domain BI316_10665 PF00717 Peptidase S24-like BI316_10670 PF00154 recA bacterial DNA recombination protein BI316_10680 PF02631 RecX family BI316_10685 PF02272 DHHA1 domain BI316_10685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI316_10685 PF01411 tRNA synthetases class II (A) BI316_10690 PF02599 Global regulator protein family BI316_10705 PF13426 PAS domain BI316_10705 PF08447 PAS fold BI316_10705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_10710 PF02678 Pirin BI316_10710 PF17954 Quercetinase C-terminal cupin domain BI316_10715 PF03466 LysR substrate binding domain BI316_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_10740 PF02581 Thiamine monophosphate synthase BI316_10740 PF08543 Phosphomethylpyrimidine kinase BI316_10755 PF13638 PIN domain BI316_10755 PF02562 PhoH-like protein BI316_10760 PF00578 AhpC/TSA family BI316_10775 PF00701 Dihydrodipicolinate synthetase family BI316_10785 PF11953 Domain of unknown function (DUF3470) BI316_10785 PF00037 4Fe-4S binding domain BI316_10790 PF05035 2-keto-3-deoxy-galactonokinase BI316_10795 PF08450 SMP-30/Gluconolactonase/LRE-like region BI316_10800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI316_10800 PF13378 Enolase C-terminal domain-like BI316_10805 PF01081 KDPG and KHG aldolase BI316_10815 PF03466 LysR substrate binding domain BI316_10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_10830 PF03442 Carbohydrate binding domain X2 BI316_10830 PF00942 Cellulose binding domain BI316_10845 PF16338 Domain of unknown function (DUF4968) BI316_10845 PF01055 Glycosyl hydrolases family 31 BI316_10845 PF17137 Domain of unknown function (DUF5110) BI316_10855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI316_10855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI316_10865 PF00083 Sugar (and other) transporter BI316_10890 PF02649 Type I GTP cyclohydrolase folE2 BI316_10900 PF01743 Poly A polymerase head domain BI316_10900 PF12626 Polymerase A arginine-rich C-terminus BI316_10900 PF12627 Probable RNA and SrmB- binding site of polymerase A BI316_10905 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI316_10910 PF02548 Ketopantoate hydroxymethyltransferase BI316_10915 PF02569 Pantoate-beta-alanine ligase BI316_10920 PF02261 Aspartate decarboxylase BI316_10925 PF00342 Phosphoglucose isomerase BI316_10950 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI316_10950 PF14310 Fibronectin type III-like domain BI316_10950 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_10960 PF00474 Sodium:solute symporter family BI316_10965 PF00990 Diguanylate cyclase, GGDEF domain BI316_10965 PF00563 EAL domain BI316_10965 PF00360 Phytochrome region BI316_10965 PF01590 GAF domain BI316_10975 PF02013 Cellulose or protein binding domain BI316_10975 PF00150 Cellulase (glycosyl hydrolase family 5) BI316_10980 PF00072 Response regulator receiver domain BI316_10995 PF04551 GcpE protein BI316_11000 PF01569 PAP2 superfamily BI316_11010 PF07690 Major Facilitator Superfamily BI316_11015 PF01177 Asp/Glu/Hydantoin racemase BI316_11020 PF00892 EamA-like transporter family BI316_11025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BI316_11025 PF01565 FAD binding domain BI316_11030 PF01180 Dihydroorotate dehydrogenase BI316_11050 PF00171 Aldehyde dehydrogenase family BI316_11065 PF00535 Glycosyl transferase family 2 BI316_11070 PF01522 Polysaccharide deacetylase BI316_11070 PF14883 Hypothetical glycosyl hydrolase family 13 BI316_11080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BI316_11080 PF17287 POTRA domain BI316_11080 PF08479 POTRA domain, ShlB-type BI316_11085 PF05594 Haemagluttinin repeat BI316_11085 PF13332 Hemagglutinin repeat BI316_11085 PF04829 Pre-toxin domain with VENN motif BI316_11095 PF05594 Haemagluttinin repeat BI316_11095 PF13332 Hemagglutinin repeat BI316_11095 PF04829 Pre-toxin domain with VENN motif BI316_11105 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BI316_11105 PF05594 Haemagluttinin repeat BI316_11105 PF13332 Hemagglutinin repeat BI316_11105 PF13018 Extended Signal Peptide of Type V secretion system BI316_11105 PF05860 haemagglutination activity domain BI316_11115 PF01842 ACT domain BI316_11115 PF03447 Homoserine dehydrogenase, NAD binding domain BI316_11115 PF00696 Amino acid kinase family BI316_11115 PF00742 Homoserine dehydrogenase BI316_11115 PF13840 ACT domain BI316_11120 PF08544 GHMP kinases C terminal BI316_11120 PF00288 GHMP kinases N terminal domain BI316_11130 PF00291 Pyridoxal-phosphate dependent enzyme BI316_11130 PF14821 Threonine synthase N terminus BI316_11140 PF13545 Crp-like helix-turn-helix domain BI316_11140 PF00027 Cyclic nucleotide-binding domain BI316_11145 PF13393 Histidyl-tRNA synthetase BI316_11145 PF03129 Anticodon binding domain BI316_11155 PF01634 ATP phosphoribosyltransferase BI316_11155 PF08029 HisG, C-terminal domain BI316_11160 PF00815 Histidinol dehydrogenase BI316_11165 PF00155 Aminotransferase class I and II BI316_11170 PF00475 Imidazoleglycerol-phosphate dehydratase BI316_11175 PF00117 Glutamine amidotransferase class-I BI316_11180 PF00977 Histidine biosynthesis protein BI316_11185 PF00977 Histidine biosynthesis protein BI316_11190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BI316_11190 PF01502 Phosphoribosyl-AMP cyclohydrolase BI316_11210 PF03079 ARD/ARD' family BI316_11215 PF00596 Class II Aldolase and Adducin N-terminal domain BI316_11220 PF13520 Amino acid permease BI316_11225 PF13520 Amino acid permease BI316_11235 PF01842 ACT domain BI316_11235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI316_11235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI316_11240 PF01565 FAD binding domain BI316_11240 PF02913 FAD linked oxidases, C-terminal domain BI316_11260 PF09285 Elongation factor P, C-terminal BI316_11260 PF08207 Elongation factor P (EF-P) KOW-like domain BI316_11260 PF01132 Elongation factor P (EF-P) OB domain BI316_11265 PF00106 short chain dehydrogenase BI316_11270 PF00682 HMGL-like BI316_11280 PF00378 Enoyl-CoA hydratase/isomerase BI316_11290 PF07670 Nucleoside recognition BI316_11290 PF02421 Ferrous iron transport protein B BI316_11290 PF07664 Ferrous iron transport protein B C terminus BI316_11305 PF00155 Aminotransferase class I and II BI316_11310 PF03473 MOSC domain BI316_11310 PF03475 3-alpha domain BI316_11315 PF01113 Dihydrodipicolinate reductase, N-terminus BI316_11315 PF05173 Dihydrodipicolinate reductase, C-terminus BI316_11320 PF00117 Glutamine amidotransferase class-I BI316_11320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BI316_11330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI316_11330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BI316_11330 PF02142 MGS-like domain BI316_11335 PF01272 Transcription elongation factor, GreA/GreB, C-term BI316_11335 PF03449 Transcription elongation factor, N-terminal BI316_11345 PF02272 DHHA1 domain BI316_11345 PF01368 DHH family BI316_11345 PF17768 RecJ OB domain BI316_11385 PF04397 LytTr DNA-binding domain BI316_11385 PF00072 Response regulator receiver domain BI316_11390 PF00472 RF-1 domain BI316_11390 PF03462 PCRF domain BI316_11395 PF01336 OB-fold nucleic acid binding domain BI316_11395 PF00152 tRNA synthetases class II (D, K and N) BI316_11400 PF00072 Response regulator receiver domain BI316_11405 PF00072 Response regulator receiver domain BI316_11405 PF01627 Hpt domain BI316_11405 PF00512 His Kinase A (phospho-acceptor) domain BI316_11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_11410 PF00378 Enoyl-CoA hydratase/isomerase BI316_11415 PF13193 AMP-binding enzyme C-terminal domain BI316_11415 PF00501 AMP-binding enzyme BI316_11425 PF00330 Aconitase family (aconitate hydratase) BI316_11425 PF00694 Aconitase C-terminal domain BI316_11440 PF00330 Aconitase family (aconitate hydratase) BI316_11440 PF06434 Aconitate hydratase 2 N-terminus BI316_11440 PF11791 Aconitate B N-terminal domain BI316_11445 PF00561 alpha/beta hydrolase fold BI316_11450 PF00563 EAL domain BI316_11450 PF03707 Bacterial signalling protein N terminal repeat BI316_11450 PF00990 Diguanylate cyclase, GGDEF domain BI316_11455 PF00072 Response regulator receiver domain BI316_11455 PF01339 CheB methylesterase BI316_11460 PF03975 CheD chemotactic sensory transduction BI316_11465 PF01739 CheR methyltransferase, SAM binding domain BI316_11465 PF03705 CheR methyltransferase, all-alpha domain BI316_11470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11470 PF02203 Tar ligand binding domain homologue BI316_11470 PF00672 HAMP domain BI316_11480 PF01584 CheW-like domain BI316_11485 PF07317 Flagellar regulator YcgR BI316_11485 PF07238 PilZ domain BI316_11495 PF00672 HAMP domain BI316_11495 PF02203 Tar ligand binding domain homologue BI316_11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11500 PF00672 HAMP domain BI316_11500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11500 PF02203 Tar ligand binding domain homologue BI316_11505 PF02203 Tar ligand binding domain homologue BI316_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11505 PF00672 HAMP domain BI316_11510 PF02203 Tar ligand binding domain homologue BI316_11510 PF00672 HAMP domain BI316_11510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11515 PF02203 Tar ligand binding domain homologue BI316_11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11515 PF00672 HAMP domain BI316_11525 PF00672 HAMP domain BI316_11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11525 PF02203 Tar ligand binding domain homologue BI316_11530 PF02203 Tar ligand binding domain homologue BI316_11530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11530 PF00672 HAMP domain BI316_11535 PF00672 HAMP domain BI316_11535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11535 PF02203 Tar ligand binding domain homologue BI316_11540 PF00672 HAMP domain BI316_11540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11540 PF02203 Tar ligand binding domain homologue BI316_11555 PF02203 Tar ligand binding domain homologue BI316_11555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11555 PF00672 HAMP domain BI316_11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11560 PF00672 HAMP domain BI316_11560 PF17200 Single Cache domain 2 BI316_11570 PF02203 Tar ligand binding domain homologue BI316_11570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_11570 PF00672 HAMP domain BI316_11575 PF01584 CheW-like domain BI316_11575 PF09078 CheY binding BI316_11575 PF02895 Signal transducing histidine kinase, homodimeric domain BI316_11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_11575 PF01627 Hpt domain BI316_11580 PF00072 Response regulator receiver domain BI316_11590 PF01584 CheW-like domain BI316_11595 PF13614 AAA domain BI316_11600 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI316_11600 PF00691 OmpA family BI316_11605 PF01618 MotA/TolQ/ExbB proton channel family BI316_11625 PF03793 PASTA domain BI316_11625 PF00069 Protein kinase domain BI316_11680 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BI316_11685 PF00665 Integrase core domain BI316_11685 PF13276 HTH-like domain BI316_11685 PF13333 Integrase core domain BI316_11720 PF13186 Iron-sulfur cluster-binding domain BI316_11720 PF04055 Radical SAM superfamily BI316_11740 PF01627 Hpt domain BI316_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_11740 PF02895 Signal transducing histidine kinase, homodimeric domain BI316_11740 PF01584 CheW-like domain BI316_11740 PF07194 P2 response regulator binding domain BI316_11745 PF04344 Chemotaxis phosphatase, CheZ BI316_11750 PF00072 Response regulator receiver domain BI316_11755 PF04539 Sigma-70 region 3 BI316_11755 PF04545 Sigma-70, region 4 BI316_11755 PF04542 Sigma-70 region 2 BI316_11760 PF10609 NUBPL iron-transfer P-loop NTPase BI316_11765 PF00448 SRP54-type protein, GTPase domain BI316_11770 PF00771 FHIPEP family BI316_11775 PF01312 FlhB HrpN YscU SpaS Family BI316_11780 PF00990 Diguanylate cyclase, GGDEF domain BI316_11780 PF03707 Bacterial signalling protein N terminal repeat BI316_11780 PF00563 EAL domain BI316_11785 PF03707 Bacterial signalling protein N terminal repeat BI316_11785 PF13188 PAS domain BI316_11785 PF00990 Diguanylate cyclase, GGDEF domain BI316_11785 PF00563 EAL domain BI316_11795 PF03707 Bacterial signalling protein N terminal repeat BI316_11795 PF00990 Diguanylate cyclase, GGDEF domain BI316_11795 PF00563 EAL domain BI316_11795 PF13188 PAS domain BI316_11800 PF01311 Bacterial export proteins, family 1 BI316_11805 PF01313 Bacterial export proteins, family 3 BI316_11815 PF00813 FliP family BI316_11820 PF04347 Flagellar biosynthesis protein, FliO BI316_11825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI316_11830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI316_11830 PF02154 Flagellar motor switch protein FliM BI316_11850 PF18269 T3SS EscN ATPase C-terminal domain BI316_11850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI316_11860 PF01706 FliG C-terminal domain BI316_11860 PF14841 FliG middle domain BI316_11860 PF14842 FliG N-terminal domain BI316_11865 PF08345 Flagellar M-ring protein C-terminal BI316_11865 PF01514 Secretory protein of YscJ/FliF family BI316_11870 PF02049 Flagellar hook-basal body complex protein FliE BI316_11875 PF00534 Glycosyl transferases group 1 BI316_11875 PF00535 Glycosyl transferase family 2 BI316_11910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI316_11910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI316_11920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI316_11925 PF02954 Bacterial regulatory protein, Fis family BI316_11925 PF00072 Response regulator receiver domain BI316_11925 PF00158 Sigma-54 interaction domain BI316_11930 PF01339 CheB methylesterase BI316_11930 PF00072 Response regulator receiver domain BI316_11935 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI316_11935 PF04552 Sigma-54, DNA binding domain BI316_11935 PF04963 Sigma-54 factor, core binding domain BI316_11940 PF00196 Bacterial regulatory proteins, luxR family BI316_11940 PF00072 Response regulator receiver domain BI316_11955 PF02561 Flagellar protein FliS BI316_11960 PF07196 Flagellin hook IN motif BI316_11960 PF02465 Flagellar hook-associated protein 2 N-terminus BI316_11960 PF07195 Flagellar hook-associated protein 2 C-terminus BI316_11965 PF00700 Bacterial flagellin C-terminal helical region BI316_11965 PF00669 Bacterial flagellin N-terminal helical region BI316_11970 PF00669 Bacterial flagellin N-terminal helical region BI316_11970 PF00700 Bacterial flagellin C-terminal helical region BI316_11975 PF07196 Flagellin hook IN motif BI316_11975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI316_11980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI316_11980 PF10135 Rod binding protein BI316_11985 PF02119 Flagellar P-ring protein BI316_11990 PF02107 Flagellar L-ring protein BI316_11995 PF00460 Flagella basal body rod protein BI316_11995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI316_12005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI316_12005 PF00460 Flagella basal body rod protein BI316_12010 PF07559 Flagellar basal body protein FlaE BI316_12010 PF00460 Flagella basal body rod protein BI316_12010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI316_12015 PF03963 Flagellar hook capping protein - N-terminal region BI316_12020 PF00460 Flagella basal body rod protein BI316_12020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI316_12030 PF00072 Response regulator receiver domain BI316_12030 PF01584 CheW-like domain BI316_12050 PF13426 PAS domain BI316_12050 PF00512 His Kinase A (phospho-acceptor) domain BI316_12050 PF13188 PAS domain BI316_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_12050 PF00989 PAS fold BI316_12055 PF00563 EAL domain BI316_12055 PF03707 Bacterial signalling protein N terminal repeat BI316_12055 PF00990 Diguanylate cyclase, GGDEF domain BI316_12060 PF07730 Histidine kinase BI316_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_12065 PF03707 Bacterial signalling protein N terminal repeat BI316_12065 PF00563 EAL domain BI316_12065 PF00990 Diguanylate cyclase, GGDEF domain BI316_12075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_12075 PF00672 HAMP domain BI316_12075 PF12729 Four helix bundle sensory module for signal transduction BI316_12080 PF04356 Protein of unknown function (DUF489) BI316_12090 PF00293 NUDIX domain BI316_12095 PF02617 ATP-dependent Clp protease adaptor protein ClpS BI316_12105 PF01176 Translation initiation factor 1A / IF-1 BI316_12110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BI316_12120 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_12125 PF01580 FtsK/SpoIIIE family BI316_12125 PF17854 FtsK alpha domain BI316_12125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BI316_12125 PF09397 Ftsk gamma domain BI316_12135 PF03548 Outer membrane lipoprotein carrier protein LolA BI316_12145 PF16193 AAA C-terminal domain BI316_12145 PF12002 MgsA AAA+ ATPase C terminal BI316_12145 PF00004 ATPase family associated with various cellular activities (AAA) BI316_12150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BI316_12160 PF02803 Thiolase, C-terminal domain BI316_12160 PF00108 Thiolase, N-terminal domain BI316_12165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI316_12165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI316_12165 PF00378 Enoyl-CoA hydratase/isomerase BI316_12175 PF00334 Nucleoside diphosphate kinase BI316_12180 PF04055 Radical SAM superfamily BI316_12190 PF13464 Domain of unknown function (DUF4115) BI316_12200 PF13360 PQQ-like domain BI316_12200 PF01011 PQQ enzyme repeat BI316_12205 PF01926 50S ribosome-binding GTPase BI316_12205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BI316_12210 PF03453 MoeA N-terminal region (domain I and II) BI316_12210 PF03454 MoeA C-terminal region (domain IV) BI316_12210 PF00994 Probable molybdopterin binding domain BI316_12215 PF00899 ThiF family BI316_12245 PF13823 Alcohol dehydrogenase GroES-associated BI316_12245 PF00107 Zinc-binding dehydrogenase BI316_12245 PF08240 Alcohol dehydrogenase GroES-like domain BI316_12255 PF03372 Endonuclease/Exonuclease/phosphatase family BI316_12265 PF03453 MoeA N-terminal region (domain I and II) BI316_12265 PF00994 Probable molybdopterin binding domain BI316_12265 PF03454 MoeA C-terminal region (domain IV) BI316_12270 PF12804 MobA-like NTP transferase domain BI316_12280 PF00561 alpha/beta hydrolase fold BI316_12285 PF01566 Natural resistance-associated macrophage protein BI316_12290 PF01325 Iron dependent repressor, N-terminal DNA binding domain BI316_12290 PF02742 Iron dependent repressor, metal binding and dimerisation domain BI316_12295 PF14437 MafB19-like deaminase BI316_12300 PF00929 Exonuclease BI316_12305 PF05552 Conserved TM helix BI316_12305 PF00924 Mechanosensitive ion channel BI316_12310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BI316_12310 PF00391 PEP-utilising enzyme, mobile domain BI316_12310 PF02896 PEP-utilising enzyme, TIM barrel domain BI316_12315 PF03618 Kinase/pyrophosphorylase BI316_12335 PF01066 CDP-alcohol phosphatidyltransferase BI316_12345 PF00561 alpha/beta hydrolase fold BI316_12360 PF00355 Rieske [2Fe-2S] domain BI316_12360 PF01266 FAD dependent oxidoreductase BI316_12370 PF09371 Tex-like protein N-terminal domain BI316_12370 PF17674 HHH domain BI316_12370 PF00575 S1 RNA binding domain BI316_12370 PF16921 Tex protein YqgF-like domain BI316_12375 PF00072 Response regulator receiver domain BI316_12375 PF09308 LuxQ, periplasmic BI316_12375 PF00512 His Kinase A (phospho-acceptor) domain BI316_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_12425 PF00034 Cytochrome c BI316_12435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_12440 PF00873 AcrB/AcrD/AcrF family BI316_12445 PF00873 AcrB/AcrD/AcrF family BI316_12455 PF01081 KDPG and KHG aldolase BI316_12460 PF00920 Dehydratase family BI316_12465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BI316_12470 PF02685 Glucokinase BI316_12475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI316_12475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI316_12480 PF17912 MalK OB fold domain BI316_12480 PF00005 ABC transporter BI316_12495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI316_12500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI316_12505 PF02910 Fumarate reductase flavoprotein C-term BI316_12505 PF00890 FAD binding domain BI316_12515 PF13085 2Fe-2S iron-sulfur cluster binding domain BI316_12520 PF03937 Flavinator of succinate dehydrogenase BI316_12530 PF12704 MacB-like periplasmic core domain BI316_12530 PF02687 FtsX-like permease family BI316_12535 PF00005 ABC transporter BI316_12545 PF00753 Metallo-beta-lactamase superfamily BI316_12545 PF03772 Competence protein BI316_12550 PF01618 MotA/TolQ/ExbB proton channel family BI316_12560 PF00664 ABC transporter transmembrane region BI316_12560 PF00005 ABC transporter BI316_12565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BI316_12570 PF02348 Cytidylyltransferase BI316_12575 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI316_12585 PF01541 GIY-YIG catalytic domain BI316_12585 PF02151 UvrB/uvrC motif BI316_12585 PF08459 UvrC Helix-hairpin-helix N-terminal BI316_12590 PF01066 CDP-alcohol phosphatidyltransferase BI316_12610 PF00550 Phosphopantetheine attachment site BI316_12610 PF13193 AMP-binding enzyme C-terminal domain BI316_12610 PF00501 AMP-binding enzyme BI316_12610 PF00668 Condensation domain BI316_12615 PF00550 Phosphopantetheine attachment site BI316_12615 PF13193 AMP-binding enzyme C-terminal domain BI316_12615 PF00668 Condensation domain BI316_12615 PF00975 Thioesterase domain BI316_12615 PF00501 AMP-binding enzyme BI316_12620 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BI316_12620 PF01648 4'-phosphopantetheinyl transferase superfamily BI316_12630 PF01527 Transposase BI316_12640 PF13276 HTH-like domain BI316_12640 PF13333 Integrase core domain BI316_12640 PF00665 Integrase core domain BI316_12650 PF00589 Phage integrase family BI316_12660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI316_12660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI316_12660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI316_12670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI316_12685 PF00196 Bacterial regulatory proteins, luxR family BI316_12685 PF00072 Response regulator receiver domain BI316_12690 PF12111 Polyribonucleotide phosphorylase C terminal BI316_12690 PF10150 Ribonuclease E/G family BI316_12690 PF00575 S1 RNA binding domain BI316_12695 PF01479 S4 domain BI316_12695 PF00849 RNA pseudouridylate synthase BI316_12700 PF11737 Protein of unknown function (DUF3300) BI316_12705 PF02535 ZIP Zinc transporter BI316_12715 PF01329 Pterin 4 alpha carbinolamine dehydratase BI316_12720 PF01106 NifU-like domain BI316_12765 PF08241 Methyltransferase domain BI316_12765 PF12697 Alpha/beta hydrolase family BI316_12775 PF00106 short chain dehydrogenase BI316_12810 PF02303 Helix-destabilising protein BI316_12855 PF01494 FAD binding domain BI316_12860 PF09335 SNARE associated Golgi protein BI316_12875 PF07995 Glucose / Sorbosone dehydrogenase BI316_12885 PF00144 Beta-lactamase BI316_12895 PF04397 LytTr DNA-binding domain BI316_12895 PF00072 Response regulator receiver domain BI316_12900 PF07694 5TMR of 5TMR-LYT BI316_12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_12900 PF06580 Histidine kinase BI316_12915 PF03797 Autotransporter beta-domain BI316_12915 PF00082 Subtilase family BI316_12925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_12930 PF00873 AcrB/AcrD/AcrF family BI316_12940 PF00072 Response regulator receiver domain BI316_12940 PF13426 PAS domain BI316_12940 PF08448 PAS fold BI316_12940 PF00512 His Kinase A (phospho-acceptor) domain BI316_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_12945 PF00072 Response regulator receiver domain BI316_12945 PF00196 Bacterial regulatory proteins, luxR family BI316_12950 PF12951 Passenger-associated-transport-repeat BI316_12950 PF12951 Passenger-associated-transport-repeat BI316_12955 PF08448 PAS fold BI316_12955 PF08447 PAS fold BI316_12955 PF00990 Diguanylate cyclase, GGDEF domain BI316_12955 PF00563 EAL domain BI316_12975 PF05974 Domain of unknown function (DUF892) BI316_13000 PF10414 Sirohaem synthase dimerisation region BI316_13000 PF14824 Sirohaem biosynthesis protein central BI316_13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI316_13015 PF05977 Transmembrane secretion effector BI316_13030 PF00857 Isochorismatase family BI316_13045 PF00072 Response regulator receiver domain BI316_13045 PF00196 Bacterial regulatory proteins, luxR family BI316_13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_13060 PF03466 LysR substrate binding domain BI316_13065 PF00361 Proton-conducting membrane transporter BI316_13065 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BI316_13065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI316_13070 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BI316_13085 PF01381 Helix-turn-helix BI316_13090 PF05284 Protein of unknown function (DUF736) BI316_13095 PF04002 RadC-like JAB domain BI316_13120 PF13356 Arm DNA-binding domain BI316_13120 PF00589 Phage integrase family BI316_13135 PF07715 TonB-dependent Receptor Plug Domain BI316_13135 PF00593 TonB dependent receptor BI316_13155 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BI316_13180 PF00593 TonB dependent receptor BI316_13180 PF07715 TonB-dependent Receptor Plug Domain BI316_13190 PF10947 Protein of unknown function (DUF2628) BI316_13220 PF00664 ABC transporter transmembrane region BI316_13220 PF00005 ABC transporter BI316_13220 PF03412 Peptidase C39 family BI316_13230 PF13614 AAA domain BI316_13270 PF01751 Toprim domain BI316_13270 PF01131 DNA topoisomerase BI316_13275 PF00145 C-5 cytosine-specific DNA methylase BI316_13325 PF06250 YhcG PDDEXK nuclease domain BI316_13325 PF17761 DUF1016 N-terminal domain BI316_13340 PF00892 EamA-like transporter family BI316_13345 PF00892 EamA-like transporter family BI316_13355 PF02525 Flavodoxin-like fold BI316_13360 PF00043 Glutathione S-transferase, C-terminal domain BI316_13360 PF02798 Glutathione S-transferase, N-terminal domain BI316_13365 PF05544 Proline racemase BI316_13370 PF03358 NADPH-dependent FMN reductase BI316_13380 PF07690 Major Facilitator Superfamily BI316_13385 PF02311 AraC-like ligand binding domain BI316_13385 PF12833 Helix-turn-helix domain BI316_13535 PF12462 DNA helicase IV / RNA helicase N terminal BI316_13535 PF13361 UvrD-like helicase C-terminal domain BI316_13535 PF00580 UvrD/REP helicase N-terminal domain BI316_13610 PF03466 LysR substrate binding domain BI316_13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_13615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI316_13615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI316_13620 PF03401 Tripartite tricarboxylate transporter family receptor BI316_13635 PF04002 RadC-like JAB domain BI316_13670 PF13356 Arm DNA-binding domain BI316_13670 PF00589 Phage integrase family BI316_13675 PF02540 NAD synthase BI316_13675 PF00958 GMP synthase C terminal domain BI316_13675 PF00117 Glutamine amidotransferase class-I BI316_13680 PF00478 IMP dehydrogenase / GMP reductase domain BI316_13680 PF00571 CBS domain BI316_13685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BI316_13685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BI316_13695 PF02254 TrkA-N domain BI316_13695 PF00999 Sodium/hydrogen exchanger family BI316_13700 PF00483 Nucleotidyl transferase BI316_13705 PF02719 Polysaccharide biosynthesis protein BI316_13710 PF00953 Glycosyl transferase family 4 BI316_13715 PF18073 Rubredoxin metal binding domain BI316_13725 PF00216 Bacterial DNA-binding protein BI316_13730 PF00575 S1 RNA binding domain BI316_13735 PF02224 Cytidylate kinase BI316_13740 PF00444 Ribosomal protein L36 BI316_13755 PF04371 Porphyromonas-type peptidyl-arginine deiminase BI316_13760 PF00795 Carbon-nitrogen hydrolase BI316_13785 PF00528 Binding-protein-dependent transport system inner membrane component BI316_13790 PF00528 Binding-protein-dependent transport system inner membrane component BI316_13810 PF00356 Bacterial regulatory proteins, lacI family BI316_13820 PF03795 YCII-related domain BI316_13825 PF02616 Segregation and condensation protein ScpA BI316_13830 PF04079 Segregation and condensation complex subunit ScpB BI316_13835 PF01479 S4 domain BI316_13835 PF00849 RNA pseudouridylate synthase BI316_13850 PF00795 Carbon-nitrogen hydrolase BI316_13855 PF00155 Aminotransferase class I and II BI316_13860 PF00005 ABC transporter BI316_13865 PF03379 CcmB protein BI316_13870 PF01578 Cytochrome C assembly protein BI316_13880 PF03100 CcmE BI316_13885 PF01578 Cytochrome C assembly protein BI316_13885 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI316_13890 PF08534 Redoxin BI316_13895 PF03918 Cytochrome C biogenesis protein BI316_13905 PF00561 alpha/beta hydrolase fold BI316_13910 PF00313 'Cold-shock' DNA-binding domain BI316_13915 PF00005 ABC transporter BI316_13915 PF00664 ABC transporter transmembrane region BI316_13920 PF00005 ABC transporter BI316_13920 PF00664 ABC transporter transmembrane region BI316_13925 PF01654 Cytochrome bd terminal oxidase subunit I BI316_13930 PF02322 Cytochrome bd terminal oxidase subunit II BI316_13960 PF00171 Aldehyde dehydrogenase family BI316_13975 PF00206 Lyase BI316_13980 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI316_13990 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BI316_13990 PF00696 Amino acid kinase family BI316_14005 PF00764 Arginosuccinate synthase BI316_14010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI316_14010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI316_14020 PF09190 DALR domain BI316_14020 PF01406 tRNA synthetases class I (C) catalytic domain BI316_14025 PF02657 Fe-S metabolism associated domain BI316_14035 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI316_14040 PF01809 Putative membrane protein insertion efficiency factor BI316_14045 PF01979 Amidohydrolase family BI316_14050 PF08460 Bacterial SH3 domain BI316_14050 PF01551 Peptidase family M23 BI316_14070 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BI316_14075 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BI316_14085 PF00753 Metallo-beta-lactamase superfamily BI316_14110 PF01527 Transposase BI316_14125 PF00295 Glycosyl hydrolases family 28 BI316_14135 PF13419 Haloacid dehalogenase-like hydrolase BI316_14145 PF01979 Amidohydrolase family BI316_14155 PF01132 Elongation factor P (EF-P) OB domain BI316_14155 PF08207 Elongation factor P (EF-P) KOW-like domain BI316_14155 PF09285 Elongation factor P, C-terminal BI316_14160 PF04055 Radical SAM superfamily BI316_14165 PF13188 PAS domain BI316_14165 PF00990 Diguanylate cyclase, GGDEF domain BI316_14165 PF00563 EAL domain BI316_14165 PF03707 Bacterial signalling protein N terminal repeat BI316_14175 PF00588 SpoU rRNA Methylase family BI316_14180 PF00459 Inositol monophosphatase family BI316_14190 PF00545 ribonuclease BI316_14210 PF00271 Helicase conserved C-terminal domain BI316_14210 PF03880 DbpA RNA binding domain BI316_14210 PF00270 DEAD/DEAH box helicase BI316_14215 PF00156 Phosphoribosyl transferase domain BI316_14220 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BI316_14225 PF00135 Carboxylesterase family BI316_14230 PF02798 Glutathione S-transferase, N-terminal domain BI316_14230 PF14497 Glutathione S-transferase, C-terminal domain BI316_14235 PF00313 'Cold-shock' DNA-binding domain BI316_14240 PF07152 YaeQ protein BI316_14250 PF00072 Response regulator receiver domain BI316_14250 PF00990 Diguanylate cyclase, GGDEF domain BI316_14250 PF00563 EAL domain BI316_14255 PF01435 Peptidase family M48 BI316_14260 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI316_14265 PF00106 short chain dehydrogenase BI316_14270 PF07879 PHB/PHA accumulation regulator DNA-binding domain BI316_14270 PF05233 PHB accumulation regulatory domain BI316_14290 PF01119 DNA mismatch repair protein, C-terminal domain BI316_14290 PF08676 MutL C terminal dimerisation domain BI316_14295 PF11741 AMIN domain BI316_14295 PF01520 N-acetylmuramoyl-L-alanine amidase BI316_14300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BI316_14305 PF01256 Carbohydrate kinase BI316_14305 PF03853 YjeF-related protein N-terminus BI316_14310 PF08331 Domain of unknown function (DUF1730) BI316_14315 PF13742 OB-fold nucleic acid binding domain BI316_14315 PF02601 Exonuclease VII, large subunit BI316_14325 PF03781 Sulfatase-modifying factor enzyme 1 BI316_14340 PF01612 3'-5' exonuclease BI316_14340 PF00570 HRDC domain BI316_14345 PF01068 ATP dependent DNA ligase domain BI316_14345 PF04679 ATP dependent DNA ligase C terminal region BI316_14345 PF13298 DNA polymerase Ligase (LigD) BI316_14365 PF00589 Phage integrase family BI316_14390 PF05598 Transposase domain (DUF772) BI316_14400 PF01527 Transposase BI316_14420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI316_14420 PF14850 DNA-binding domain of Proline dehydrogenase BI316_14420 PF01619 Proline dehydrogenase BI316_14420 PF00171 Aldehyde dehydrogenase family BI316_14435 PF13333 Integrase core domain BI316_14435 PF00665 Integrase core domain BI316_14435 PF13276 HTH-like domain BI316_14440 PF02796 Helix-turn-helix domain of resolvase BI316_14440 PF00239 Resolvase, N terminal domain BI316_14455 PF02384 N-6 DNA Methylase BI316_14460 PF09572 XamI restriction endonuclease BI316_14510 PF01584 CheW-like domain BI316_14515 PF00672 HAMP domain BI316_14515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_14515 PF02743 Cache domain BI316_14520 PF02245 Methylpurine-DNA glycosylase (MPG) BI316_14525 PF00271 Helicase conserved C-terminal domain BI316_14525 PF00270 DEAD/DEAH box helicase BI316_14525 PF08494 DEAD/H associated BI316_14545 PF04386 Stringent starvation protein B BI316_14550 PF00043 Glutathione S-transferase, C-terminal domain BI316_14550 PF02798 Glutathione S-transferase, N-terminal domain BI316_14555 PF02167 Cytochrome C1 family BI316_14560 PF00033 Cytochrome b/b6/petB BI316_14560 PF00032 Cytochrome b(C-terminal)/b6/petD BI316_14565 PF00355 Rieske [2Fe-2S] domain BI316_14565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BI316_14575 PF01464 Transglycosylase SLT domain BI316_14590 PF00919 Uncharacterized protein family UPF0004 BI316_14590 PF01938 TRAM domain BI316_14590 PF04055 Radical SAM superfamily BI316_14595 PF02562 PhoH-like protein BI316_14605 PF02130 Uncharacterized protein family UPF0054 BI316_14615 PF00571 CBS domain BI316_14615 PF03471 Transporter associated domain BI316_14630 PF00171 Aldehyde dehydrogenase family BI316_14635 PF00528 Binding-protein-dependent transport system inner membrane component BI316_14640 PF00528 Binding-protein-dependent transport system inner membrane component BI316_14645 PF00005 ABC transporter BI316_14645 PF08402 TOBE domain BI316_14650 PF02321 Outer membrane efflux protein BI316_14655 PF07690 Major Facilitator Superfamily BI316_14660 PF13533 Biotin-lipoyl like BI316_14665 PF13416 Bacterial extracellular solute-binding protein BI316_14670 PF00202 Aminotransferase class-III BI316_14675 PF00120 Glutamine synthetase, catalytic domain BI316_14680 PF07722 Peptidase C26 BI316_14685 PF00120 Glutamine synthetase, catalytic domain BI316_14690 PF01266 FAD dependent oxidoreductase BI316_14695 PF00990 Diguanylate cyclase, GGDEF domain BI316_14695 PF00072 Response regulator receiver domain BI316_14700 PF01814 Hemerythrin HHE cation binding domain BI316_14705 PF00083 Sugar (and other) transporter BI316_14705 PF07690 Major Facilitator Superfamily BI316_14715 PF00384 Molybdopterin oxidoreductase BI316_14720 PF02634 FdhD/NarQ family BI316_14725 PF07690 Major Facilitator Superfamily BI316_14740 PF00202 Aminotransferase class-III BI316_14750 PF04286 Protein of unknown function (DUF445) BI316_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_14755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI316_14755 PF00072 Response regulator receiver domain BI316_14755 PF01627 Hpt domain BI316_14755 PF00512 His Kinase A (phospho-acceptor) domain BI316_14755 PF00672 HAMP domain BI316_14760 PF00072 Response regulator receiver domain BI316_14765 PF07690 Major Facilitator Superfamily BI316_14775 PF05088 Bacterial NAD-glutamate dehydrogenase BI316_14785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_14785 PF00529 HlyD membrane-fusion protein of T1SS BI316_14790 PF00873 AcrB/AcrD/AcrF family BI316_14795 PF00356 Bacterial regulatory proteins, lacI family BI316_14800 PF00391 PEP-utilising enzyme, mobile domain BI316_14800 PF05524 PEP-utilising enzyme, N-terminal BI316_14800 PF00381 PTS HPr component phosphorylation site BI316_14800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI316_14800 PF02896 PEP-utilising enzyme, TIM barrel domain BI316_14805 PF00294 pfkB family carbohydrate kinase BI316_14810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BI316_14855 PF07549 SecD/SecF GG Motif BI316_14855 PF02355 Protein export membrane protein BI316_14860 PF07549 SecD/SecF GG Motif BI316_14860 PF13721 SecD export protein N-terminal TM region BI316_14860 PF02355 Protein export membrane protein BI316_14865 PF02699 Preprotein translocase subunit BI316_14870 PF01702 Queuine tRNA-ribosyltransferase BI316_14875 PF02547 Queuosine biosynthesis protein BI316_14915 PF02927 Cellulase N-terminal ig-like domain BI316_14915 PF00759 Glycosyl hydrolase family 9 BI316_14925 PF00037 4Fe-4S binding domain BI316_14940 PF01467 Cytidylyltransferase-like BI316_14950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_14950 PF00183 Hsp90 protein BI316_14970 PF07715 TonB-dependent Receptor Plug Domain BI316_14970 PF00593 TonB dependent receptor BI316_14980 PF04616 Glycosyl hydrolases family 43 BI316_14985 PF07532 Bacterial Ig-like domain (group 4) BI316_14990 PF00593 TonB dependent receptor BI316_14990 PF07715 TonB-dependent Receptor Plug Domain BI316_15000 PF00082 Subtilase family BI316_15000 PF09286 Pro-kumamolisin, activation domain BI316_15030 PF13520 Amino acid permease BI316_15045 PF00557 Metallopeptidase family M24 BI316_15045 PF01321 Creatinase/Prolidase N-terminal domain BI316_15050 PF00171 Aldehyde dehydrogenase family BI316_15055 PF00701 Dihydrodipicolinate synthetase family BI316_15060 PF04324 BFD-like [2Fe-2S] binding domain BI316_15060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_15070 PF01266 FAD dependent oxidoreductase BI316_15075 PF05544 Proline racemase BI316_15085 PF02881 SRP54-type protein, helical bundle domain BI316_15085 PF00448 SRP54-type protein, GTPase domain BI316_15095 PF14815 NUDIX domain BI316_15095 PF10576 Iron-sulfur binding domain of endonuclease III BI316_15095 PF00633 Helix-hairpin-helix motif BI316_15095 PF00730 HhH-GPD superfamily base excision DNA repair protein BI316_15100 PF04362 Bacterial Fe(2+) trafficking BI316_15105 PF13426 PAS domain BI316_15105 PF00072 Response regulator receiver domain BI316_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_15135 PF08212 Lipocalin-like domain BI316_15150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_15150 PF02770 Acyl-CoA dehydrogenase, middle domain BI316_15150 PF12806 Acetyl-CoA dehydrogenase C-terminal like BI316_15150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_15160 PF02780 Transketolase, C-terminal domain BI316_15160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BI316_15160 PF02779 Transketolase, pyrimidine binding domain BI316_15180 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI316_15185 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI316_15185 PF00753 Metallo-beta-lactamase superfamily BI316_15190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI316_15190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI316_15205 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI316_15220 PF14667 Polysaccharide biosynthesis C-terminal domain BI316_15230 PF13439 Glycosyltransferase Family 4 BI316_15230 PF00534 Glycosyl transferases group 1 BI316_15250 PF02397 Bacterial sugar transferase BI316_15270 PF13411 MerR HTH family regulatory protein BI316_15275 PF00216 Bacterial DNA-binding protein BI316_15280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BI316_15280 PF01588 Putative tRNA binding domain BI316_15280 PF03147 Ferredoxin-fold anticodon binding domain BI316_15280 PF03484 tRNA synthetase B5 domain BI316_15280 PF03483 B3/4 domain BI316_15285 PF01409 tRNA synthetases class II core domain (F) BI316_15285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BI316_15290 PF00453 Ribosomal protein L20 BI316_15295 PF01632 Ribosomal protein L35 BI316_15300 PF05198 Translation initiation factor IF-3, N-terminal domain BI316_15300 PF00707 Translation initiation factor IF-3, C-terminal domain BI316_15305 PF03129 Anticodon binding domain BI316_15305 PF02824 TGS domain BI316_15305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI316_15305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI316_15310 PF00356 Bacterial regulatory proteins, lacI family BI316_15315 PF00686 Starch binding domain BI316_15315 PF00128 Alpha amylase, catalytic domain BI316_15320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BI316_15330 PF14508 Glycosyl-hydrolase 97 N-terminal BI316_15330 PF10566 Glycoside hydrolase 97 BI316_15330 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI316_15345 PF01527 Transposase BI316_15355 PF00128 Alpha amylase, catalytic domain BI316_15360 PF01527 Transposase BI316_15415 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI316_15420 PF05101 Type IV secretory pathway, VirB3-like protein BI316_15430 PF01464 Transglycosylase SLT domain BI316_15435 PF00437 Type II/IV secretion system protein BI316_15440 PF03743 Bacterial conjugation TrbI-like protein BI316_15460 PF02534 Type IV secretory system Conjugative DNA transfer BI316_15475 PF12344 Ultra-violet resistance protein B BI316_15475 PF02151 UvrB/uvrC motif BI316_15475 PF04851 Type III restriction enzyme, res subunit BI316_15475 PF00271 Helicase conserved C-terminal domain BI316_15475 PF17757 UvrB interaction domain BI316_15570 PF01527 Transposase BI316_15630 PF00182 Chitinase class I BI316_15700 PF00114 Pilin (bacterial filament) BI316_15700 PF07963 Prokaryotic N-terminal methylation motif BI316_15705 PF05567 Neisseria PilC beta-propeller domain BI316_15730 PF07694 5TMR of 5TMR-LYT BI316_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_15730 PF06580 Histidine kinase BI316_15735 PF03641 Possible lysine decarboxylase BI316_15735 PF11892 Domain of unknown function (DUF3412) BI316_15735 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BI316_15740 PF00593 TonB dependent receptor BI316_15750 PF01914 MarC family integral membrane protein BI316_15760 PF00462 Glutaredoxin BI316_15765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI316_15765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI316_15770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BI316_15770 PF02222 ATP-grasp domain BI316_15775 PF00731 AIR carboxylase BI316_15785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BI316_15785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BI316_15795 PF00575 S1 RNA binding domain BI316_15795 PF00013 KH domain BI316_15795 PF01138 3' exoribonuclease family, domain 1 BI316_15795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BI316_15795 PF03725 3' exoribonuclease family, domain 2 BI316_15800 PF00312 Ribosomal protein S15 BI316_15805 PF09157 Pseudouridine synthase II TruB, C-terminal BI316_15805 PF01509 TruB family pseudouridylate synthase (N terminal domain) BI316_15805 PF16198 tRNA pseudouridylate synthase B C-terminal domain BI316_15810 PF02033 Ribosome-binding factor A BI316_15815 PF00009 Elongation factor Tu GTP binding domain BI316_15815 PF04760 Translation initiation factor IF-2, N-terminal region BI316_15815 PF08364 Bacterial translation initiation factor IF-2 associated region BI316_15815 PF11987 Translation-initiation factor 2 BI316_15820 PF00575 S1 RNA binding domain BI316_15820 PF13184 NusA-like KH domain BI316_15820 PF08529 NusA N-terminal domain BI316_15825 PF02576 RimP N-terminal domain BI316_15825 PF17384 RimP C-terminal SH3 domain BI316_15835 PF00361 Proton-conducting membrane transporter BI316_15840 PF00361 Proton-conducting membrane transporter BI316_15840 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BI316_15845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI316_15845 PF00361 Proton-conducting membrane transporter BI316_15850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI316_15855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BI316_15860 PF12838 4Fe-4S dicluster domain BI316_15865 PF00146 NADH dehydrogenase BI316_15870 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BI316_15870 PF00384 Molybdopterin oxidoreductase BI316_15870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BI316_15875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BI316_15875 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BI316_15875 PF10531 SLBB domain BI316_15885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BI316_15890 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BI316_15895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BI316_15900 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BI316_15915 PF00121 Triosephosphate isomerase BI316_15920 PF00106 short chain dehydrogenase BI316_15935 PF00563 EAL domain BI316_15935 PF00990 Diguanylate cyclase, GGDEF domain BI316_15935 PF03707 Bacterial signalling protein N terminal repeat BI316_15950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI316_15950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI316_15950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI316_15950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI316_15955 PF01039 Carboxyl transferase domain BI316_15955 PF17848 Acetyl-coA carboxylase zinc finger domain BI316_15960 PF00290 Tryptophan synthase alpha chain BI316_15970 PF00291 Pyridoxal-phosphate dependent enzyme BI316_15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_15975 PF03466 LysR substrate binding domain BI316_15980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BI316_15985 PF01416 tRNA pseudouridine synthase BI316_16005 PF02774 Semialdehyde dehydrogenase, dimerisation domain BI316_16005 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI316_16010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI316_16010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI316_16015 PF01264 Chorismate synthase BI316_16020 PF05175 Methyltransferase small domain BI316_16025 PF02630 SCO1/SenC BI316_16030 PF02666 Phosphatidylserine decarboxylase BI316_16045 PF05872 Bacterial protein of unknown function (DUF853) BI316_16050 PF00293 NUDIX domain BI316_16070 PF03449 Transcription elongation factor, N-terminal BI316_16070 PF01272 Transcription elongation factor, GreA/GreB, C-term BI316_16075 PF00919 Uncharacterized protein family UPF0004 BI316_16075 PF04055 Radical SAM superfamily BI316_16075 PF18693 TRAM domain BI316_16080 PF01738 Dienelactone hydrolase family BI316_16100 PF00692 dUTPase BI316_16110 PF10609 NUBPL iron-transfer P-loop NTPase BI316_16115 PF00593 TonB dependent receptor BI316_16115 PF07715 TonB-dependent Receptor Plug Domain BI316_16130 PF05649 Peptidase family M13 BI316_16130 PF01431 Peptidase family M13 BI316_16140 PF01431 Peptidase family M13 BI316_16140 PF05649 Peptidase family M13 BI316_16155 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI316_16160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI316_16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_16165 PF01266 FAD dependent oxidoreductase BI316_16170 PF04235 Protein of unknown function (DUF418) BI316_16175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI316_16180 PF00877 NlpC/P60 family BI316_16185 PF00877 NlpC/P60 family BI316_16200 PF00375 Sodium:dicarboxylate symporter family BI316_16205 PF00245 Alkaline phosphatase BI316_16215 PF01171 PP-loop family BI316_16215 PF09179 TilS substrate binding domain BI316_16215 PF11734 TilS substrate C-terminal domain BI316_16220 PF02609 Exonuclease VII small subunit BI316_16225 PF00348 Polyprenyl synthetase BI316_16230 PF14521 Lysine-specific metallo-endopeptidase BI316_16240 PF01523 Putative modulator of DNA gyrase BI316_16245 PF04751 Protein of unknown function (DUF615) BI316_16250 PF01523 Putative modulator of DNA gyrase BI316_16260 PF13502 AsmA-like C-terminal region BI316_16260 PF13116 Protein of unknown function BI316_16265 PF00575 S1 RNA binding domain BI316_16265 PF10150 Ribonuclease E/G family BI316_16270 PF02545 Maf-like protein BI316_16275 PF04402 Protein of unknown function (DUF541) BI316_16290 PF02590 Predicted SPOUT methyltransferase BI316_16305 PF01467 Cytidylyltransferase-like BI316_16320 PF13603 Leucyl-tRNA synthetase, Domain 2 BI316_16320 PF00133 tRNA synthetases class I (I, L, M and V) BI316_16320 PF08264 Anticodon-binding domain of tRNA BI316_16330 PF00085 Thioredoxin BI316_16360 PF04070 Domain of unknown function (DUF378) BI316_16365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI316_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_16375 PF03466 LysR substrate binding domain BI316_16405 PF00005 ABC transporter BI316_16405 PF00664 ABC transporter transmembrane region BI316_16420 PF00873 AcrB/AcrD/AcrF family BI316_16435 PF02321 Outer membrane efflux protein BI316_16440 PF00486 Transcriptional regulatory protein, C terminal BI316_16440 PF00072 Response regulator receiver domain BI316_16445 PF00512 His Kinase A (phospho-acceptor) domain BI316_16445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_16445 PF00672 HAMP domain BI316_16450 PF00999 Sodium/hydrogen exchanger family BI316_16455 PF00144 Beta-lactamase BI316_16460 PF03737 Aldolase/RraA BI316_16480 PF00990 Diguanylate cyclase, GGDEF domain BI316_16480 PF00072 Response regulator receiver domain BI316_16485 PF01479 S4 domain BI316_16485 PF00849 RNA pseudouridylate synthase BI316_16490 PF00990 Diguanylate cyclase, GGDEF domain BI316_16490 PF08448 PAS fold BI316_16490 PF00563 EAL domain BI316_16495 PF00271 Helicase conserved C-terminal domain BI316_16495 PF00270 DEAD/DEAH box helicase BI316_16495 PF03880 DbpA RNA binding domain BI316_16550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI316_16550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BI316_16560 PF00654 Voltage gated chloride channel BI316_16565 PF00107 Zinc-binding dehydrogenase BI316_16565 PF08240 Alcohol dehydrogenase GroES-like domain BI316_16585 PF07715 TonB-dependent Receptor Plug Domain BI316_16585 PF00593 TonB dependent receptor BI316_16595 PF00082 Subtilase family BI316_16595 PF01483 Proprotein convertase P-domain BI316_16605 PF00082 Subtilase family BI316_16605 PF01483 Proprotein convertase P-domain BI316_16615 PF00248 Aldo/keto reductase family BI316_16625 PF07690 Major Facilitator Superfamily BI316_16630 PF03466 LysR substrate binding domain BI316_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_16640 PF12833 Helix-turn-helix domain BI316_16640 PF06719 AraC-type transcriptional regulator N-terminus BI316_16650 PF00440 Bacterial regulatory proteins, tetR family BI316_16650 PF16859 Tetracyclin repressor-like, C-terminal domain BI316_16655 PF02321 Outer membrane efflux protein BI316_16660 PF00873 AcrB/AcrD/AcrF family BI316_16665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_16665 PF00529 HlyD membrane-fusion protein of T1SS BI316_16675 PF01475 Ferric uptake regulator family BI316_16680 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI316_16705 PF06123 Inner membrane protein CreD BI316_16715 PF00672 HAMP domain BI316_16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_16715 PF00512 His Kinase A (phospho-acceptor) domain BI316_16720 PF00072 Response regulator receiver domain BI316_16720 PF00486 Transcriptional regulatory protein, C terminal BI316_16725 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BI316_16735 PF03461 TRCF domain BI316_16735 PF00270 DEAD/DEAH box helicase BI316_16735 PF02559 CarD-like/TRCF domain BI316_16735 PF17757 UvrB interaction domain BI316_16735 PF00271 Helicase conserved C-terminal domain BI316_16770 PF01627 Hpt domain BI316_16770 PF01584 CheW-like domain BI316_16770 PF02895 Signal transducing histidine kinase, homodimeric domain BI316_16770 PF09078 CheY binding BI316_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_16780 PF00672 HAMP domain BI316_16780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_16780 PF02203 Tar ligand binding domain homologue BI316_16785 PF01584 CheW-like domain BI316_16790 PF00990 Diguanylate cyclase, GGDEF domain BI316_16790 PF13426 PAS domain BI316_16790 PF00563 EAL domain BI316_16795 PF01739 CheR methyltransferase, SAM binding domain BI316_16795 PF03705 CheR methyltransferase, all-alpha domain BI316_16800 PF00072 Response regulator receiver domain BI316_16800 PF01339 CheB methylesterase BI316_16805 PF13091 PLD-like domain BI316_16810 PF05649 Peptidase family M13 BI316_16810 PF01431 Peptidase family M13 BI316_16820 PF00300 Histidine phosphatase superfamily (branch 1) BI316_16825 PF04493 Endonuclease V BI316_16835 PF05726 Pirin C-terminal cupin domain BI316_16835 PF02678 Pirin BI316_16850 PF05726 Pirin C-terminal cupin domain BI316_16850 PF02678 Pirin BI316_16855 PF02554 Carbon starvation protein CstA BI316_16855 PF13722 5TM C-terminal transporter carbon starvation CstA BI316_16860 PF04328 Selenoprotein, putative BI316_16905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI316_16905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI316_16910 PF00941 FAD binding domain in molybdopterin dehydrogenase BI316_16910 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI316_16915 PF00111 2Fe-2S iron-sulfur cluster binding domain BI316_16915 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI316_16915 PF01799 [2Fe-2S] binding domain BI316_16920 PF16197 Ketoacyl-synthetase C-terminal extension BI316_16920 PF09277 Erythronolide synthase, docking BI316_16920 PF08990 Erythronolide synthase docking BI316_16920 PF08240 Alcohol dehydrogenase GroES-like domain BI316_16920 PF00698 Acyl transferase domain BI316_16920 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_16920 PF08659 KR domain BI316_16920 PF14765 Polyketide synthase dehydratase BI316_16920 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_16920 PF00550 Phosphopantetheine attachment site BI316_16925 PF00563 EAL domain BI316_16925 PF01590 GAF domain BI316_16925 PF00990 Diguanylate cyclase, GGDEF domain BI316_16925 PF00360 Phytochrome region BI316_16930 PF00436 Single-strand binding protein family BI316_16935 PF00348 Polyprenyl synthetase BI316_16950 PF02875 Mur ligase family, glutamate ligase domain BI316_16950 PF08245 Mur ligase middle domain BI316_16965 PF00696 Amino acid kinase family BI316_16965 PF01842 ACT domain BI316_16970 PF02567 Phenazine biosynthesis-like protein BI316_16975 PF02567 Phenazine biosynthesis-like protein BI316_16985 PF02566 OsmC-like protein BI316_16990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI316_16990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI316_16995 PF03652 Holliday junction resolvase BI316_17000 PF02622 Uncharacterized ACR, COG1678 BI316_17010 PF13302 Acetyltransferase (GNAT) domain BI316_17010 PF00958 GMP synthase C terminal domain BI316_17010 PF00117 Glutamine amidotransferase class-I BI316_17010 PF03352 Methyladenine glycosylase BI316_17010 PF13673 Acetyltransferase (GNAT) domain BI316_17020 PF03211 Pectate lyase BI316_17025 PF00437 Type II/IV secretion system protein BI316_17030 PF00437 Type II/IV secretion system protein BI316_17035 PF01168 Alanine racemase, N-terminal domain BI316_17040 PF14748 Pyrroline-5-carboxylate reductase dimerisation BI316_17040 PF03807 NADP oxidoreductase coenzyme F420-dependent BI316_17050 PF01551 Peptidase family M23 BI316_17070 PF01965 DJ-1/PfpI family BI316_17080 PF02082 Transcriptional regulator BI316_17085 PF01458 Uncharacterized protein family (UPF0051) BI316_17090 PF00005 ABC transporter BI316_17095 PF01458 Uncharacterized protein family (UPF0051) BI316_17100 PF00266 Aminotransferase class-V BI316_17110 PF00355 Rieske [2Fe-2S] domain BI316_17115 PF00593 TonB dependent receptor BI316_17115 PF07715 TonB-dependent Receptor Plug Domain BI316_17120 PF18331 PKHD-type hydroxylase C-terminal domain BI316_17120 PF13640 2OG-Fe(II) oxygenase superfamily BI316_17145 PF02424 ApbE family BI316_17150 PF00175 Oxidoreductase NAD-binding domain BI316_17150 PF00258 Flavodoxin BI316_17150 PF00667 FAD binding domain BI316_17170 PF07687 Peptidase dimerisation domain BI316_17170 PF01546 Peptidase family M20/M25/M40 BI316_17180 PF01636 Phosphotransferase enzyme family BI316_17185 PF00483 Nucleotidyl transferase BI316_17190 PF00308 Bacterial dnaA protein BI316_17195 PF01594 AI-2E family transporter BI316_17205 PF00586 AIR synthase related protein, N-terminal domain BI316_17205 PF02769 AIR synthase related protein, C-terminal domain BI316_17215 PF00551 Formyl transferase BI316_17235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI316_17240 PF01722 BolA-like protein BI316_17245 PF00571 CBS domain BI316_17245 PF01380 SIS domain BI316_17260 PF03968 OstA-like protein BI316_17265 PF00005 ABC transporter BI316_17270 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI316_17270 PF04552 Sigma-54, DNA binding domain BI316_17270 PF04963 Sigma-54 factor, core binding domain BI316_17275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BI316_17280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI316_17285 PF07475 HPr Serine kinase C-terminal domain BI316_17285 PF02603 HPr Serine kinase N terminus BI316_17290 PF03668 P-loop ATPase protein family BI316_17300 PF00381 PTS HPr component phosphorylation site BI316_17305 PF02896 PEP-utilising enzyme, TIM barrel domain BI316_17305 PF00391 PEP-utilising enzyme, mobile domain BI316_17305 PF05524 PEP-utilising enzyme, N-terminal BI316_17310 PF03448 MgtE intracellular N domain BI316_17310 PF00571 CBS domain BI316_17310 PF01769 Divalent cation transporter BI316_17315 PF00756 Putative esterase BI316_17325 PF02322 Cytochrome bd terminal oxidase subunit II BI316_17330 PF01654 Cytochrome bd terminal oxidase subunit I BI316_17340 PF00324 Amino acid permease BI316_17350 PF00544 Pectate lyase BI316_17360 PF00561 alpha/beta hydrolase fold BI316_17370 PF00196 Bacterial regulatory proteins, luxR family BI316_17375 PF00324 Amino acid permease BI316_17410 PF12706 Beta-lactamase superfamily domain BI316_17415 PF04820 Tryptophan halogenase BI316_17450 PF00376 MerR family regulatory protein BI316_17450 PF09278 MerR, DNA binding BI316_17455 PF07690 Major Facilitator Superfamily BI316_17465 PF03738 Glutathionylspermidine synthase preATP-grasp BI316_17490 PF04012 PspA/IM30 family BI316_17500 PF01243 Pyridoxamine 5'-phosphate oxidase BI316_17500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BI316_17505 PF01202 Shikimate kinase BI316_17510 PF01761 3-dehydroquinate synthase BI316_17520 PF01208 Uroporphyrinogen decarboxylase (URO-D) BI316_17590 PF02954 Bacterial regulatory protein, Fis family BI316_17590 PF01590 GAF domain BI316_17590 PF00158 Sigma-54 interaction domain BI316_17595 PF07690 Major Facilitator Superfamily BI316_17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_17600 PF00512 His Kinase A (phospho-acceptor) domain BI316_17600 PF01627 Hpt domain BI316_17600 PF00672 HAMP domain BI316_17600 PF00072 Response regulator receiver domain BI316_17600 PF17149 Periplasmic sensor domain found in signal transduction proteins BI316_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_17605 PF00672 HAMP domain BI316_17605 PF00072 Response regulator receiver domain BI316_17605 PF01627 Hpt domain BI316_17605 PF00512 His Kinase A (phospho-acceptor) domain BI316_17605 PF17149 Periplasmic sensor domain found in signal transduction proteins BI316_17615 PF00072 Response regulator receiver domain BI316_17615 PF01627 Hpt domain BI316_17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_17615 PF00512 His Kinase A (phospho-acceptor) domain BI316_17620 PF00072 Response regulator receiver domain BI316_17620 PF01627 Hpt domain BI316_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_17620 PF00512 His Kinase A (phospho-acceptor) domain BI316_17625 PF04264 YceI-like domain BI316_17645 PF03315 Serine dehydratase beta chain BI316_17645 PF03313 Serine dehydratase alpha chain BI316_17650 PF12697 Alpha/beta hydrolase family BI316_17660 PF00696 Amino acid kinase family BI316_17660 PF03447 Homoserine dehydrogenase, NAD binding domain BI316_17660 PF00742 Homoserine dehydrogenase BI316_17665 PF01053 Cys/Met metabolism PLP-dependent enzyme BI316_17670 PF00561 alpha/beta hydrolase fold BI316_17675 PF08525 Opacity-associated protein A N-terminal motif BI316_17675 PF01476 LysM domain BI316_17675 PF01551 Peptidase family M23 BI316_17680 PF00009 Elongation factor Tu GTP binding domain BI316_17680 PF16658 Class II release factor RF3, C-terminal domain BI316_17685 PF03006 Haemolysin-III related BI316_17690 PF05170 AsmA family BI316_17695 PF00478 IMP dehydrogenase / GMP reductase domain BI316_17695 PF00571 CBS domain BI316_17700 PF00535 Glycosyl transferase family 2 BI316_17705 PF00912 Transglycosylase BI316_17710 PF01430 Hsp33 protein BI316_17720 PF00593 TonB dependent receptor BI316_17720 PF07715 TonB-dependent Receptor Plug Domain BI316_17730 PF00440 Bacterial regulatory proteins, tetR family BI316_17735 PF00561 alpha/beta hydrolase fold BI316_17740 PF09317 Domain of unknown function (DUF1974) BI316_17740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI316_17740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI316_17765 PF01597 Glycine cleavage H-protein BI316_17770 PF01571 Aminomethyltransferase folate-binding domain BI316_17770 PF08669 Glycine cleavage T-protein C-terminal barrel domain BI316_17780 PF16200 C-terminal region of band_7 BI316_17780 PF01145 SPFH domain / Band 7 family BI316_17785 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BI316_17790 PF03819 MazG nucleotide pyrophosphohydrolase domain BI316_17795 PF00459 Inositol monophosphatase family BI316_17800 PF00293 NUDIX domain BI316_17805 PF00202 Aminotransferase class-III BI316_17810 PF04452 RNA methyltransferase BI316_17815 PF02685 Glucokinase BI316_17830 PF01476 LysM domain BI316_17830 PF00704 Glycosyl hydrolases family 18 BI316_17845 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI316_17845 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_17845 PF14310 Fibronectin type III-like domain BI316_17845 PF07691 PA14 domain BI316_17855 PF01301 Glycosyl hydrolases family 35 BI316_17860 PF13520 Amino acid permease BI316_17870 PF02056 Family 4 glycosyl hydrolase BI316_17870 PF11975 Family 4 glycosyl hydrolase C-terminal domain BI316_17880 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI316_17880 PF07971 Glycosyl hydrolase family 92 BI316_17885 PF01301 Glycosyl hydrolases family 35 BI316_17920 PF03932 CutC family BI316_17925 PF01112 Asparaginase BI316_17945 PF13302 Acetyltransferase (GNAT) domain BI316_17960 PF00072 Response regulator receiver domain BI316_17960 PF01627 Hpt domain BI316_17960 PF01584 CheW-like domain BI316_17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_17965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BI316_17965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_17975 PF00072 Response regulator receiver domain BI316_17980 PF00072 Response regulator receiver domain BI316_17985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BI316_17985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BI316_17995 PF03747 ADP-ribosylglycohydrolase BI316_18000 PF00814 Glycoprotease family BI316_18005 PF13307 Helicase C-terminal domain BI316_18005 PF04851 Type III restriction enzyme, res subunit BI316_18015 PF00905 Penicillin binding protein transpeptidase domain BI316_18015 PF14814 Bifunctional transglycosylase second domain BI316_18015 PF00912 Transglycosylase BI316_18020 PF00535 Glycosyl transferase family 2 BI316_18035 PF04607 Region found in RelA / SpoT proteins BI316_18035 PF02824 TGS domain BI316_18035 PF13291 ACT domain BI316_18040 PF08042 PqqA family BI316_18045 PF12706 Beta-lactamase superfamily domain BI316_18050 PF03070 TENA/THI-4/PQQC family BI316_18055 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BI316_18060 PF13186 Iron-sulfur cluster-binding domain BI316_18060 PF04055 Radical SAM superfamily BI316_18075 PF02685 Glucokinase BI316_18090 PF11898 Domain of unknown function (DUF3418) BI316_18090 PF04408 Helicase associated domain (HA2) BI316_18090 PF00271 Helicase conserved C-terminal domain BI316_18090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BI316_18090 PF00270 DEAD/DEAH box helicase BI316_18095 PF00210 Ferritin-like domain BI316_18105 PF00570 HRDC domain BI316_18105 PF09382 RQC domain BI316_18105 PF16124 RecQ zinc-binding BI316_18105 PF00270 DEAD/DEAH box helicase BI316_18105 PF00271 Helicase conserved C-terminal domain BI316_18140 PF00672 HAMP domain BI316_18140 PF02203 Tar ligand binding domain homologue BI316_18140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_18160 PF13426 PAS domain BI316_18160 PF07536 HWE histidine kinase BI316_18160 PF13581 Histidine kinase-like ATPase domain BI316_18165 PF06508 Queuosine biosynthesis protein QueC BI316_18175 PF04055 Radical SAM superfamily BI316_18185 PF00691 OmpA family BI316_18190 PF07676 WD40-like Beta Propeller Repeat BI316_18190 PF04052 TolB amino-terminal domain BI316_18200 PF02472 Biopolymer transport protein ExbD/TolR BI316_18205 PF01618 MotA/TolQ/ExbB proton channel family BI316_18210 PF03061 Thioesterase superfamily BI316_18215 PF17864 RuvB AAA lid domain BI316_18215 PF05496 Holliday junction DNA helicase RuvB P-loop domain BI316_18215 PF05491 RuvB C-terminal winged helix domain BI316_18225 PF02705 K+ potassium transporter BI316_18230 PF07499 RuvA, C-terminal domain BI316_18230 PF01330 RuvA N terminal domain BI316_18235 PF02075 Crossover junction endodeoxyribonuclease RuvC BI316_18240 PF01709 Transcriptional regulator BI316_18255 PF02938 GAD domain BI316_18255 PF00152 tRNA synthetases class II (D, K and N) BI316_18255 PF01336 OB-fold nucleic acid binding domain BI316_18270 PF07690 Major Facilitator Superfamily BI316_18280 PF04185 Phosphoesterase family BI316_18280 PF05506 Domain of unknown function (DUF756) BI316_18285 PF05506 Domain of unknown function (DUF756) BI316_18285 PF04185 Phosphoesterase family BI316_18305 PF03466 LysR substrate binding domain BI316_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_18315 PF12848 ABC transporter BI316_18315 PF00005 ABC transporter BI316_18320 PF07715 TonB-dependent Receptor Plug Domain BI316_18320 PF00593 TonB dependent receptor BI316_18335 PF00593 TonB dependent receptor BI316_18335 PF07715 TonB-dependent Receptor Plug Domain BI316_18340 PF00593 TonB dependent receptor BI316_18340 PF07715 TonB-dependent Receptor Plug Domain BI316_18345 PF00067 Cytochrome P450 BI316_18355 PF00999 Sodium/hydrogen exchanger family BI316_18355 PF02254 TrkA-N domain BI316_18380 PF07660 Secretin and TonB N terminus short domain BI316_18380 PF07715 TonB-dependent Receptor Plug Domain BI316_18380 PF00593 TonB dependent receptor BI316_18390 PF06276 Ferric iron reductase FhuF-like transporter BI316_18390 PF04183 IucA / IucC family BI316_18395 PF07690 Major Facilitator Superfamily BI316_18405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BI316_18405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI316_18420 PF02654 Cobalamin-5-phosphate synthase BI316_18430 PF02277 Phosphoribosyltransferase BI316_18435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BI316_18440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI316_18440 PF07685 CobB/CobQ-like glutamine amidotransferase domain BI316_18445 PF00155 Aminotransferase class I and II BI316_18450 PF17113 Regulatory signalling modulator protein AmpE BI316_18450 PF03186 CobD/Cbib protein BI316_18455 PF12557 Cob(I)alamin adenosyltransferase N terminal BI316_18455 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BI316_18470 PF00593 TonB dependent receptor BI316_18470 PF07715 TonB-dependent Receptor Plug Domain BI316_18475 PF17871 AAA lid domain BI316_18475 PF10431 C-terminal, D2-small domain, of ClpB protein BI316_18475 PF00004 ATPase family associated with various cellular activities (AAA) BI316_18475 PF07724 AAA domain (Cdc48 subfamily) BI316_18475 PF02861 Clp amino terminal domain, pathogenicity island component BI316_18480 PF00005 ABC transporter BI316_18485 PF00528 Binding-protein-dependent transport system inner membrane component BI316_18490 PF09084 NMT1/THI5 like BI316_18495 PF00248 Aldo/keto reductase family BI316_18505 PF07715 TonB-dependent Receptor Plug Domain BI316_18505 PF00593 TonB dependent receptor BI316_18510 PF01541 GIY-YIG catalytic domain BI316_18545 PF00593 TonB dependent receptor BI316_18545 PF07715 TonB-dependent Receptor Plug Domain BI316_18550 PF02358 Trehalose-phosphatase BI316_18555 PF00723 Glycosyl hydrolases family 15 BI316_18560 PF00982 Glycosyltransferase family 20 BI316_18565 PF01011 PQQ enzyme repeat BI316_18575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_18575 PF02203 Tar ligand binding domain homologue BI316_18575 PF00672 HAMP domain BI316_18580 PF04134 Protein of unknown function, DUF393 BI316_18595 PF00849 RNA pseudouridylate synthase BI316_18600 PF13525 Outer membrane lipoprotein BI316_18610 PF02540 NAD synthase BI316_18610 PF00795 Carbon-nitrogen hydrolase BI316_18640 PF13406 Transglycosylase SLT domain BI316_18670 PF01129 NAD:arginine ADP-ribosyltransferase BI316_18695 PF00549 CoA-ligase BI316_18695 PF02629 CoA binding domain BI316_18700 PF08442 ATP-grasp domain BI316_18700 PF00549 CoA-ligase BI316_18705 PF00512 His Kinase A (phospho-acceptor) domain BI316_18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_18710 PF00158 Sigma-54 interaction domain BI316_18710 PF02954 Bacterial regulatory protein, Fis family BI316_18710 PF00072 Response regulator receiver domain BI316_18715 PF00437 Type II/IV secretion system protein BI316_18715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI316_18720 PF00437 Type II/IV secretion system protein BI316_18720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI316_18730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI316_18730 PF00437 Type II/IV secretion system protein BI316_18735 PF07963 Prokaryotic N-terminal methylation motif BI316_18735 PF00114 Pilin (bacterial filament) BI316_18740 PF07963 Prokaryotic N-terminal methylation motif BI316_18740 PF00114 Pilin (bacterial filament) BI316_18745 PF00482 Type II secretion system (T2SS), protein F BI316_18750 PF06750 Bacterial Peptidase A24 N-terminal domain BI316_18750 PF01478 Type IV leader peptidase family BI316_18755 PF01121 Dephospho-CoA kinase BI316_18775 PF13276 HTH-like domain BI316_18775 PF00665 Integrase core domain BI316_18775 PF13333 Integrase core domain BI316_18785 PF00989 PAS fold BI316_18785 PF16736 Single Cache-like BI316_18785 PF00512 His Kinase A (phospho-acceptor) domain BI316_18785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_18790 PF00486 Transcriptional regulatory protein, C terminal BI316_18790 PF00072 Response regulator receiver domain BI316_18805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI316_18805 PF00128 Alpha amylase, catalytic domain BI316_18875 PF04002 RadC-like JAB domain BI316_18900 PF13426 PAS domain BI316_18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_18900 PF00072 Response regulator receiver domain BI316_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_18905 PF13426 PAS domain BI316_18905 PF00072 Response regulator receiver domain BI316_18955 PF01527 Transposase BI316_19000 PF00072 Response regulator receiver domain BI316_19000 PF13188 PAS domain BI316_19000 PF08448 PAS fold BI316_19000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_19000 PF00512 His Kinase A (phospho-acceptor) domain BI316_19030 PF13676 TIR domain BI316_19050 PF00657 GDSL-like Lipase/Acylhydrolase BI316_19050 PF03797 Autotransporter beta-domain BI316_19060 PF05690 Thiazole biosynthesis protein ThiG BI316_19070 PF02390 Putative methyltransferase BI316_19075 PF02080 TrkA-C domain BI316_19075 PF03600 Citrate transporter BI316_19095 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI316_19100 PF01741 Large-conductance mechanosensitive channel, MscL BI316_19110 PF00356 Bacterial regulatory proteins, lacI family BI316_19120 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI316_19120 PF00703 Glycosyl hydrolases family 2 BI316_19120 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BI316_19125 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI316_19125 PF14508 Glycosyl-hydrolase 97 N-terminal BI316_19125 PF10566 Glycoside hydrolase 97 BI316_19135 PF00135 Carboxylesterase family BI316_19140 PF00588 SpoU rRNA Methylase family BI316_19140 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI316_19150 PF11838 ERAP1-like C-terminal domain BI316_19150 PF01433 Peptidase family M1 domain BI316_19190 PF00873 AcrB/AcrD/AcrF family BI316_19195 PF00529 HlyD membrane-fusion protein of T1SS BI316_19195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_19200 PF00009 Elongation factor Tu GTP binding domain BI316_19205 PF01507 Phosphoadenosine phosphosulfate reductase family BI316_19210 PF00175 Oxidoreductase NAD-binding domain BI316_19210 PF00258 Flavodoxin BI316_19210 PF00667 FAD binding domain BI316_19215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI316_19215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI316_19220 PF01507 Phosphoadenosine phosphosulfate reductase family BI316_19240 PF01627 Hpt domain BI316_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_19240 PF00512 His Kinase A (phospho-acceptor) domain BI316_19240 PF00072 Response regulator receiver domain BI316_19255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_19255 PF03466 LysR substrate binding domain BI316_19260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI316_19260 PF14824 Sirohaem biosynthesis protein central BI316_19260 PF10414 Sirohaem synthase dimerisation region BI316_19265 PF00291 Pyridoxal-phosphate dependent enzyme BI316_19275 PF01661 Macro domain BI316_19280 PF00274 Fructose-bisphosphate aldolase class-I BI316_19295 PF00224 Pyruvate kinase, barrel domain BI316_19295 PF02887 Pyruvate kinase, alpha/beta domain BI316_19305 PF00162 Phosphoglycerate kinase BI316_19330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BI316_19330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BI316_19340 PF03922 OmpW family BI316_19345 PF03922 OmpW family BI316_19355 PF04273 Putative phosphatase (DUF442) BI316_19355 PF00753 Metallo-beta-lactamase superfamily BI316_19365 PF00528 Binding-protein-dependent transport system inner membrane component BI316_19370 PF03459 TOBE domain BI316_19370 PF00005 ABC transporter BI316_19405 PF01476 LysM domain BI316_19405 PF03734 L,D-transpeptidase catalytic domain BI316_19420 PF07715 TonB-dependent Receptor Plug Domain BI316_19420 PF00593 TonB dependent receptor BI316_19425 PF12146 Serine aminopeptidase, S33 BI316_19430 PF02779 Transketolase, pyrimidine binding domain BI316_19430 PF00456 Transketolase, thiamine diphosphate binding domain BI316_19430 PF02780 Transketolase, C-terminal domain BI316_19435 PF00375 Sodium:dicarboxylate symporter family BI316_19450 PF00092 von Willebrand factor type A domain BI316_19450 PF07584 Aerotolerance regulator N-terminal BI316_19470 PF07726 ATPase family associated with various cellular activities (AAA) BI316_19470 PF17863 AAA lid domain BI316_19480 PF11741 AMIN domain BI316_19480 PF00263 Bacterial type II and III secretion system protein BI316_19480 PF03958 Bacterial type II/III secretion system short domain BI316_19480 PF07660 Secretin and TonB N terminus short domain BI316_19505 PF00905 Penicillin binding protein transpeptidase domain BI316_19505 PF00912 Transglycosylase BI316_19505 PF17092 Penicillin-binding protein OB-like domain BI316_19515 PF00285 Citrate synthase, C-terminal domain BI316_19520 PF01197 Ribosomal protein L31 BI316_19525 PF01156 Inosine-uridine preferring nucleoside hydrolase BI316_19530 PF00271 Helicase conserved C-terminal domain BI316_19530 PF00270 DEAD/DEAH box helicase BI316_19530 PF17191 RecG wedge domain BI316_19535 PF01042 Endoribonuclease L-PSP BI316_19540 PF02824 TGS domain BI316_19540 PF13291 ACT domain BI316_19540 PF04607 Region found in RelA / SpoT proteins BI316_19545 PF01192 RNA polymerase Rpb6 BI316_19550 PF00625 Guanylate kinase BI316_19555 PF08340 Domain of unknown function (DUF1732) BI316_19555 PF03755 YicC-like family, N-terminal region BI316_19560 PF01138 3' exoribonuclease family, domain 1 BI316_19560 PF03725 3' exoribonuclease family, domain 2 BI316_19570 PF01725 Ham1 family BI316_19575 PF06969 HemN C-terminal domain BI316_19575 PF04055 Radical SAM superfamily BI316_19590 PF00557 Metallopeptidase family M24 BI316_19600 PF05195 Aminopeptidase P, N-terminal domain BI316_19600 PF00557 Metallopeptidase family M24 BI316_19605 PF03695 Uncharacterised protein family (UPF0149) BI316_19615 PF05164 Cell division protein ZapA BI316_19625 PF01812 5-formyltetrahydrofolate cyclo-ligase family BI316_19635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BI316_19645 PF13369 Transglutaminase-like superfamily BI316_19650 PF00301 Rubredoxin BI316_19655 PF02581 Thiamine monophosphate synthase BI316_19670 PF00202 Aminotransferase class-III BI316_19675 PF00196 Bacterial regulatory proteins, luxR family BI316_19675 PF17874 MalT-like TPR region BI316_19680 PF00127 Copper binding proteins, plastocyanin/azurin family BI316_19685 PF00155 Aminotransferase class I and II BI316_19695 PF00034 Cytochrome c BI316_19695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BI316_19700 PF01593 Flavin containing amine oxidoreductase BI316_19715 PF00202 Aminotransferase class-III BI316_19720 PF00520 Ion transport protein BI316_19720 PF00027 Cyclic nucleotide-binding domain BI316_19740 PF01569 PAP2 superfamily BI316_19745 PF01062 Bestrophin, RFP-TM, chloride channel BI316_19755 PF01225 Mur ligase family, catalytic domain BI316_19755 PF02875 Mur ligase family, glutamate ligase domain BI316_19755 PF08245 Mur ligase middle domain BI316_19765 PF00365 Phosphofructokinase BI316_19775 PF03030 Inorganic H+ pyrophosphatase BI316_19785 PF00719 Inorganic pyrophosphatase BI316_19795 PF00593 TonB dependent receptor BI316_19795 PF07715 TonB-dependent Receptor Plug Domain BI316_19800 PF12833 Helix-turn-helix domain BI316_19805 PF00486 Transcriptional regulatory protein, C terminal BI316_19805 PF18500 CadC C-terminal domain 1 BI316_19810 PF13667 ThiC-associated domain BI316_19810 PF01964 Radical SAM ThiC family BI316_19820 PF00593 TonB dependent receptor BI316_19820 PF07715 TonB-dependent Receptor Plug Domain BI316_19825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_19825 PF00672 HAMP domain BI316_19835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BI316_19835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BI316_19840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI316_19840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI316_19840 PF00205 Thiamine pyrophosphate enzyme, central domain BI316_19850 PF00291 Pyridoxal-phosphate dependent enzyme BI316_19860 PF00180 Isocitrate/isopropylmalate dehydrogenase BI316_19865 PF00694 Aconitase C-terminal domain BI316_19870 PF00330 Aconitase family (aconitate hydratase) BI316_19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_19880 PF00990 Diguanylate cyclase, GGDEF domain BI316_19880 PF17151 Periplasmic sensor domain BI316_19895 PF02321 Outer membrane efflux protein BI316_19900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BI316_19910 PF03279 Bacterial lipid A biosynthesis acyltransferase BI316_19935 PF03949 Malic enzyme, NAD binding domain BI316_19935 PF00390 Malic enzyme, N-terminal domain BI316_19935 PF01515 Phosphate acetyl/butaryl transferase BI316_19940 PF00375 Sodium:dicarboxylate symporter family BI316_19950 PF00512 His Kinase A (phospho-acceptor) domain BI316_19950 PF02743 Cache domain BI316_19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_19955 PF07690 Major Facilitator Superfamily BI316_19965 PF03466 LysR substrate binding domain BI316_19965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_19975 PF00248 Aldo/keto reductase family BI316_19990 PF00196 Bacterial regulatory proteins, luxR family BI316_19990 PF00072 Response regulator receiver domain BI316_20005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_20005 PF08521 Two-component sensor kinase N-terminal BI316_20005 PF00512 His Kinase A (phospho-acceptor) domain BI316_20010 PF00072 Response regulator receiver domain BI316_20010 PF00486 Transcriptional regulatory protein, C terminal BI316_20025 PF03600 Citrate transporter BI316_20030 PF00106 short chain dehydrogenase BI316_20035 PF00356 Bacterial regulatory proteins, lacI family BI316_20050 PF00128 Alpha amylase, catalytic domain BI316_20065 PF03193 RsgA GTPase BI316_20095 PF00593 TonB dependent receptor BI316_20095 PF07715 TonB-dependent Receptor Plug Domain BI316_20100 PF01522 Polysaccharide deacetylase BI316_20105 PF00462 Glutaredoxin BI316_20120 PF01527 Transposase BI316_20150 PF02645 Uncharacterised protein, DegV family COG1307 BI316_20155 PF01327 Polypeptide deformylase BI316_20165 PF03960 ArsC family BI316_20185 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BI316_20190 PF01270 Glycosyl hydrolases family 8 BI316_20195 PF03170 Bacterial cellulose synthase subunit BI316_20200 PF03552 Cellulose synthase BI316_20200 PF07238 PilZ domain BI316_20200 PF00535 Glycosyl transferase family 2 BI316_20215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BI316_20215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BI316_20260 PF00593 TonB dependent receptor BI316_20260 PF07715 TonB-dependent Receptor Plug Domain BI316_20270 PF00392 Bacterial regulatory proteins, gntR family BI316_20270 PF07702 UTRA domain BI316_20280 PF00263 Bacterial type II and III secretion system protein BI316_20280 PF03958 Bacterial type II/III secretion system short domain BI316_20290 PF10741 Type II secretion system (T2SS), protein M subtype b BI316_20295 PF05137 Fimbrial assembly protein (PilN) BI316_20300 PF03934 Type II secretion system (T2SS), protein K BI316_20310 PF07963 Prokaryotic N-terminal methylation motif BI316_20315 PF12019 Type II transport protein GspH BI316_20320 PF08334 Type II secretion system (T2SS), protein G BI316_20325 PF00482 Type II secretion system (T2SS), protein F BI316_20335 PF00437 Type II/IV secretion system protein BI316_20335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI316_20340 PF00082 Subtilase family BI316_20340 PF04151 Bacterial pre-peptidase C-terminal domain BI316_20345 PF05658 Head domain of trimeric autotransporter adhesin BI316_20345 PF03895 YadA-like membrane anchor domain BI316_20345 PF05662 Coiled stalk of trimeric autotransporter adhesin BI316_20345 PF13018 Extended Signal Peptide of Type V secretion system BI316_20350 PF00082 Subtilase family BI316_20350 PF04151 Bacterial pre-peptidase C-terminal domain BI316_20355 PF05662 Coiled stalk of trimeric autotransporter adhesin BI316_20355 PF03895 YadA-like membrane anchor domain BI316_20355 PF13018 Extended Signal Peptide of Type V secretion system BI316_20355 PF05658 Head domain of trimeric autotransporter adhesin BI316_20365 PF02769 AIR synthase related protein, C-terminal domain BI316_20365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BI316_20365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BI316_20380 PF13098 Thioredoxin-like domain BI316_20380 PF10411 Disulfide bond isomerase protein N-terminus BI316_20390 PF00589 Phage integrase family BI316_20390 PF02899 Phage integrase, N-terminal SAM-like domain BI316_20405 PF03739 Lipopolysaccharide export system permease LptF/LptG BI316_20415 PF02789 Cytosol aminopeptidase family, N-terminal domain BI316_20415 PF00883 Cytosol aminopeptidase family, catalytic domain BI316_20430 PF10458 Valyl tRNA synthetase tRNA binding arm BI316_20430 PF08264 Anticodon-binding domain of tRNA BI316_20430 PF00133 tRNA synthetases class I (I, L, M and V) BI316_20435 PF07715 TonB-dependent Receptor Plug Domain BI316_20435 PF00593 TonB dependent receptor BI316_20440 PF01464 Transglycosylase SLT domain BI316_20440 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BI316_20445 PF00544 Pectate lyase BI316_20460 PF01066 CDP-alcohol phosphatidyltransferase BI316_20470 PF04073 Aminoacyl-tRNA editing domain BI316_20470 PF03129 Anticodon binding domain BI316_20470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI316_20475 PF00816 H-NS histone family BI316_20485 PF02405 Permease MlaE BI316_20490 PF00005 ABC transporter BI316_20495 PF02470 MlaD protein BI316_20495 PF03886 ABC-type transport auxiliary lipoprotein component BI316_20515 PF14307 Glycosyltransferase WbsX BI316_20515 PF05045 Rhamnan synthesis protein F BI316_20520 PF01144 Coenzyme A transferase BI316_20525 PF01144 Coenzyme A transferase BI316_20530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI316_20530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI316_20530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI316_20530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI316_20535 PF01050 Mannose-6-phosphate isomerase BI316_20535 PF00483 Nucleotidyl transferase BI316_20545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI316_20545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI316_20545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI316_20550 PF04321 RmlD substrate binding domain BI316_20555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BI316_20560 PF00483 Nucleotidyl transferase BI316_20565 PF16363 GDP-mannose 4,6 dehydratase BI316_20570 PF01012 Electron transfer flavoprotein domain BI316_20575 PF00766 Electron transfer flavoprotein FAD-binding domain BI316_20575 PF01012 Electron transfer flavoprotein domain BI316_20585 PF01040 UbiA prenyltransferase family BI316_20590 PF04030 D-arabinono-1,4-lactone oxidase BI316_20590 PF01565 FAD binding domain BI316_20595 PF00106 short chain dehydrogenase BI316_20605 PF01370 NAD dependent epimerase/dehydratase family BI316_20610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI316_20610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_20635 PF00535 Glycosyl transferase family 2 BI316_20645 PF14524 Wzt C-terminal domain BI316_20645 PF00005 ABC transporter BI316_20655 PF01053 Cys/Met metabolism PLP-dependent enzyme BI316_20660 PF00571 CBS domain BI316_20660 PF00291 Pyridoxal-phosphate dependent enzyme BI316_20680 PF00437 Type II/IV secretion system protein BI316_20690 PF14497 Glutathione S-transferase, C-terminal domain BI316_20690 PF02798 Glutathione S-transferase, N-terminal domain BI316_20705 PF00270 DEAD/DEAH box helicase BI316_20705 PF00271 Helicase conserved C-terminal domain BI316_20715 PF07715 TonB-dependent Receptor Plug Domain BI316_20715 PF00593 TonB dependent receptor BI316_20725 PF01242 6-pyruvoyl tetrahydropterin synthase BI316_20740 PF13185 GAF domain BI316_20750 PF00756 Putative esterase BI316_20755 PF00593 TonB dependent receptor BI316_20755 PF07715 TonB-dependent Receptor Plug Domain BI316_20760 PF13419 Haloacid dehalogenase-like hydrolase BI316_20765 PF00817 impB/mucB/samB family BI316_20765 PF11799 impB/mucB/samB family C-terminal domain BI316_20770 PF07977 FabA-like domain BI316_20775 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_20775 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_20785 PF01432 Peptidase family M3 BI316_20800 PF07731 Multicopper oxidase BI316_20800 PF00394 Multicopper oxidase BI316_20800 PF07732 Multicopper oxidase BI316_20805 PF05275 Copper resistance protein B precursor (CopB) BI316_20810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI316_20840 PF01380 SIS domain BI316_20845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_20850 PF00005 ABC transporter BI316_20850 PF12704 MacB-like periplasmic core domain BI316_20850 PF02687 FtsX-like permease family BI316_20855 PF12704 MacB-like periplasmic core domain BI316_20855 PF02687 FtsX-like permease family BI316_20855 PF00005 ABC transporter BI316_20860 PF02687 FtsX-like permease family BI316_20860 PF12704 MacB-like periplasmic core domain BI316_20880 PF00132 Bacterial transferase hexapeptide (six repeats) BI316_20880 PF12804 MobA-like NTP transferase domain BI316_20880 PF14602 Hexapeptide repeat of succinyl-transferase BI316_20895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BI316_20895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BI316_20900 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI316_20900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI316_20905 PF00231 ATP synthase BI316_20910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI316_20910 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI316_20910 PF00306 ATP synthase alpha/beta chain, C terminal domain BI316_20915 PF00213 ATP synthase delta (OSCP) subunit BI316_20920 PF00430 ATP synthase B/B' CF(0) BI316_20925 PF00137 ATP synthase subunit C BI316_20930 PF00119 ATP synthase A chain BI316_20950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_20950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI316_20960 PF00364 Biotin-requiring enzyme BI316_20960 PF02817 e3 binding domain BI316_20960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI316_20995 PF03180 NLPA lipoprotein BI316_21000 PF00528 Binding-protein-dependent transport system inner membrane component BI316_21005 PF00005 ABC transporter BI316_21005 PF09383 NIL domain BI316_21010 PF00892 EamA-like transporter family BI316_21015 PF04461 Protein of unknown function (DUF520) BI316_21025 PF00989 PAS fold BI316_21025 PF00072 Response regulator receiver domain BI316_21025 PF01627 Hpt domain BI316_21025 PF18415 Histidine kinase receptor ArcB trans-membrane domain BI316_21025 PF00512 His Kinase A (phospho-acceptor) domain BI316_21025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_21045 PF13419 Haloacid dehalogenase-like hydrolase BI316_21050 PF01479 S4 domain BI316_21050 PF00849 RNA pseudouridylate synthase BI316_21055 PF05175 Methyltransferase small domain BI316_21055 PF08468 Methyltransferase small domain N-terminal BI316_21065 PF07995 Glucose / Sorbosone dehydrogenase BI316_21075 PF00512 His Kinase A (phospho-acceptor) domain BI316_21075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_21075 PF00989 PAS fold BI316_21095 PF01168 Alanine racemase, N-terminal domain BI316_21095 PF00842 Alanine racemase, C-terminal domain BI316_21100 PF01266 FAD dependent oxidoreductase BI316_21105 PF01037 Lrp/AsnC ligand binding domain BI316_21115 PF01641 SelR domain BI316_21125 PF01618 MotA/TolQ/ExbB proton channel family BI316_21130 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI316_21130 PF00691 OmpA family BI316_21160 PF01061 ABC-2 type transporter BI316_21165 PF00005 ABC transporter BI316_21170 PF00999 Sodium/hydrogen exchanger family BI316_21180 PF02469 Fasciclin domain BI316_21185 PF03167 Uracil DNA glycosylase superfamily BI316_21195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI316_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_21205 PF03466 LysR substrate binding domain BI316_21210 PF03358 NADPH-dependent FMN reductase BI316_21215 PF00248 Aldo/keto reductase family BI316_21250 PF13520 Amino acid permease BI316_21260 PF00072 Response regulator receiver domain BI316_21260 PF04397 LytTr DNA-binding domain BI316_21265 PF00672 HAMP domain BI316_21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_21265 PF02743 Cache domain BI316_21265 PF06580 Histidine kinase BI316_21290 PF05974 Domain of unknown function (DUF892) BI316_21295 PF05067 Manganese containing catalase BI316_21315 PF01339 CheB methylesterase BI316_21315 PF08448 PAS fold BI316_21315 PF01739 CheR methyltransferase, SAM binding domain BI316_21315 PF03705 CheR methyltransferase, all-alpha domain BI316_21330 PF02954 Bacterial regulatory protein, Fis family BI316_21330 PF00072 Response regulator receiver domain BI316_21330 PF00158 Sigma-54 interaction domain BI316_21345 PF01654 Cytochrome bd terminal oxidase subunit I BI316_21350 PF02322 Cytochrome bd terminal oxidase subunit II BI316_21370 PF16363 GDP-mannose 4,6 dehydratase BI316_21380 PF03275 UDP-galactopyranose mutase BI316_21390 PF00005 ABC transporter BI316_21390 PF00664 ABC transporter transmembrane region BI316_21405 PF13823 Alcohol dehydrogenase GroES-associated BI316_21405 PF08240 Alcohol dehydrogenase GroES-like domain BI316_21405 PF00107 Zinc-binding dehydrogenase BI316_21450 PF07715 TonB-dependent Receptor Plug Domain BI316_21450 PF00593 TonB dependent receptor BI316_21465 PF00005 ABC transporter BI316_21475 PF03466 LysR substrate binding domain BI316_21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_21480 PF01042 Endoribonuclease L-PSP BI316_21490 PF01527 Transposase BI316_21510 PF00672 HAMP domain BI316_21510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI316_21510 PF02203 Tar ligand binding domain homologue BI316_21530 PF02525 Flavodoxin-like fold BI316_21575 PF00557 Metallopeptidase family M24 BI316_21610 PF04542 Sigma-70 region 2 BI316_21610 PF00140 Sigma-70 factor, region 1.2 BI316_21610 PF04546 Sigma-70, non-essential region BI316_21610 PF03979 Sigma-70 factor, region 1.1 BI316_21610 PF04539 Sigma-70 region 3 BI316_21610 PF04545 Sigma-70, region 4 BI316_21615 PF02580 D-Tyr-tRNA(Tyr) deacylase BI316_21620 PF03279 Bacterial lipid A biosynthesis acyltransferase BI316_21640 PF00925 GTP cyclohydrolase II BI316_21660 PF00535 Glycosyl transferase family 2 BI316_21675 PF01029 NusB family BI316_21675 PF01189 16S rRNA methyltransferase RsmB/F BI316_21680 PF00551 Formyl transferase BI316_21680 PF02911 Formyl transferase, C-terminal domain BI316_21685 PF01327 Polypeptide deformylase BI316_21690 PF01476 LysM domain BI316_21695 PF02481 DNA recombination-mediator protein A BI316_21695 PF17782 DprA winged helix domain BI316_21700 PF04361 Protein of unknown function (DUF494) BI316_21705 PF07963 Prokaryotic N-terminal methylation motif BI316_21705 PF00114 Pilin (bacterial filament) BI316_21715 PF01131 DNA topoisomerase BI316_21715 PF13368 Topoisomerase C-terminal repeat BI316_21715 PF01751 Toprim domain BI316_21720 PF01300 Telomere recombination BI316_21745 PF01343 Peptidase family S49 BI316_21750 PF01554 MatE BI316_21770 PF00271 Helicase conserved C-terminal domain BI316_21770 PF00270 DEAD/DEAH box helicase BI316_21770 PF17764 3′ DNA-binding domain (3′BD) BI316_21770 PF18074 Primosomal protein N C-terminal domain BI316_21770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BI316_21775 PF13417 Glutathione S-transferase, N-terminal domain BI316_21775 PF00043 Glutathione S-transferase, C-terminal domain BI316_21790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI316_21795 PF03458 UPF0126 domain BI316_21800 PF04542 Sigma-70 region 2 BI316_21800 PF04545 Sigma-70, region 4 BI316_21805 PF03167 Uracil DNA glycosylase superfamily BI316_21810 PF00072 Response regulator receiver domain BI316_21815 PF18075 FtsX extracellular domain BI316_21820 PF00005 ABC transporter BI316_21825 PF12300 ATP-dependent RNA helicase RhlB BI316_21825 PF00271 Helicase conserved C-terminal domain BI316_21825 PF00270 DEAD/DEAH box helicase BI316_21830 PF00085 Thioredoxin BI316_21835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI316_21835 PF07498 Rho termination factor, N-terminal domain BI316_21835 PF07497 Rho termination factor, RNA-binding domain BI316_21840 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BI316_21845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_21845 PF03466 LysR substrate binding domain BI316_21855 PF03971 Monomeric isocitrate dehydrogenase BI316_21870 PF09704 CRISPR-associated protein (Cas_Cas5) BI316_21890 PF01867 CRISPR associated protein Cas1 BI316_21895 PF09827 CRISPR associated protein Cas2 BI316_21905 PF01476 LysM domain BI316_21905 PF04972 BON domain BI316_21910 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BI316_21910 PF14489 QueF-like protein BI316_21915 PF01546 Peptidase family M20/M25/M40 BI316_21915 PF07687 Peptidase dimerisation domain BI316_21920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_21925 PF00873 AcrB/AcrD/AcrF family BI316_21930 PF00873 AcrB/AcrD/AcrF family BI316_21935 PF07063 Domain of unknown function (DUF1338) BI316_21980 PF01427 D-ala-D-ala dipeptidase BI316_21985 PF01510 N-acetylmuramoyl-L-alanine amidase BI316_21995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI316_21995 PF13378 Enolase C-terminal domain-like BI316_22005 PF13520 Amino acid permease BI316_22020 PF05360 yiaA/B two helix domain BI316_22025 PF07995 Glucose / Sorbosone dehydrogenase BI316_22030 PF00933 Glycosyl hydrolase family 3 N terminal domain BI316_22030 PF14310 Fibronectin type III-like domain BI316_22030 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI316_22035 PF02152 Dihydroneopterin aldolase BI316_22040 PF00814 Glycoprotease family BI316_22045 PF01165 Ribosomal protein S21 BI316_22050 PF09424 Yqey-like protein BI316_22060 PF03631 Virulence factor BrkB BI316_22065 PF10410 DnaB-helicase binding domain of primase BI316_22065 PF08278 DNA primase DnaG DnaB-binding BI316_22065 PF08275 DNA primase catalytic core, N-terminal domain BI316_22065 PF01807 CHC2 zinc finger BI316_22070 PF13593 SBF-like CPA transporter family (DUF4137) BI316_22080 PF01040 UbiA prenyltransferase family BI316_22105 PF00510 Cytochrome c oxidase subunit III BI316_22110 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BI316_22120 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI316_22125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI316_22125 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BI316_22135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI316_22135 PF14850 DNA-binding domain of Proline dehydrogenase BI316_22135 PF00171 Aldehyde dehydrogenase family BI316_22135 PF01619 Proline dehydrogenase BI316_22170 PF00579 tRNA synthetases class I (W and Y) BI316_22175 PF01551 Peptidase family M23 BI316_22175 PF04225 Opacity-associated protein A LysM-like domain BI316_22180 PF03702 Anhydro-N-acetylmuramic acid kinase BI316_22190 PF07690 Major Facilitator Superfamily BI316_22195 PF03372 Endonuclease/Exonuclease/phosphatase family BI316_22200 PF00156 Phosphoribosyl transferase domain BI316_22210 PF13614 AAA domain BI316_22215 PF17762 HTH domain found in ParB protein BI316_22215 PF02195 ParB-like nuclease domain BI316_22230 PF01370 NAD dependent epimerase/dehydratase family BI316_22235 PF00535 Glycosyl transferase family 2 BI316_22250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI316_22250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI316_22250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI316_22250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI316_22255 PF00692 dUTPase BI316_22260 PF02441 Flavoprotein BI316_22260 PF04127 DNA / pantothenate metabolism flavoprotein BI316_22265 PF04002 RadC-like JAB domain BI316_22270 PF03485 Arginyl tRNA synthetase N terminal domain BI316_22270 PF05746 DALR anticodon binding domain BI316_22270 PF00750 tRNA synthetases class I (R) BI316_22285 PF00106 short chain dehydrogenase BI316_22290 PF01757 Acyltransferase family BI316_22295 PF03033 Glycosyltransferase family 28 N-terminal domain BI316_22300 PF13193 AMP-binding enzyme C-terminal domain BI316_22300 PF00668 Condensation domain BI316_22300 PF00550 Phosphopantetheine attachment site BI316_22300 PF00975 Thioesterase domain BI316_22300 PF00501 AMP-binding enzyme BI316_22305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI316_22305 PF17810 Arginine decarboxylase helical bundle domain BI316_22305 PF17944 Arginine decarboxylase C-terminal helical extension BI316_22310 PF17284 Spermidine synthase tetramerisation domain BI316_22340 PF00543 Nitrogen regulatory protein P-II BI316_22345 PF04380 Membrane fusogenic activity BI316_22350 PF01078 Magnesium chelatase, subunit ChlI BI316_22350 PF13335 Magnesium chelatase, subunit ChlI C-terminal BI316_22365 PF12792 CSS motif domain associated with EAL BI316_22365 PF00563 EAL domain BI316_22370 PF00487 Fatty acid desaturase BI316_22375 PF00111 2Fe-2S iron-sulfur cluster binding domain BI316_22375 PF00970 Oxidoreductase FAD-binding domain BI316_22375 PF00175 Oxidoreductase NAD-binding domain BI316_22380 PF00440 Bacterial regulatory proteins, tetR family BI316_22405 PF01139 tRNA-splicing ligase RtcB BI316_22440 PF01370 NAD dependent epimerase/dehydratase family BI316_22440 PF08338 Domain of unknown function (DUF1731) BI316_22445 PF00072 Response regulator receiver domain BI316_22445 PF00486 Transcriptional regulatory protein, C terminal BI316_22450 PF00512 His Kinase A (phospho-acceptor) domain BI316_22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_22450 PF08521 Two-component sensor kinase N-terminal BI316_22480 PF00595 PDZ domain BI316_22500 PF01594 AI-2E family transporter BI316_22505 PF13419 Haloacid dehalogenase-like hydrolase BI316_22510 PF00883 Cytosol aminopeptidase family, catalytic domain BI316_22510 PF02789 Cytosol aminopeptidase family, N-terminal domain BI316_22520 PF04542 Sigma-70 region 2 BI316_22520 PF08281 Sigma-70, region 4 BI316_22525 PF00199 Catalase BI316_22540 PF00196 Bacterial regulatory proteins, luxR family BI316_22540 PF00072 Response regulator receiver domain BI316_22545 PF07730 Histidine kinase BI316_22550 PF13533 Biotin-lipoyl like BI316_22555 PF00005 ABC transporter BI316_22580 PF00892 EamA-like transporter family BI316_22605 PF00579 tRNA synthetases class I (W and Y) BI316_22610 PF05532 CsbD-like BI316_22625 PF00491 Arginase family BI316_22655 PF02223 Thymidylate kinase BI316_22670 PF03309 Type III pantothenate kinase BI316_22675 PF08279 HTH domain BI316_22675 PF02237 Biotin protein ligase C terminal domain BI316_22675 PF03099 Biotin/lipoate A/B protein ligase family BI316_22690 PF06167 Glucose-regulated metallo-peptidase M90 BI316_22705 PF00672 HAMP domain BI316_22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI316_22705 PF00512 His Kinase A (phospho-acceptor) domain BI316_22710 PF00486 Transcriptional regulatory protein, C terminal BI316_22710 PF00072 Response regulator receiver domain BI316_22720 PF01207 Dihydrouridine synthase (Dus) BI316_22745 PF00199 Catalase BI316_22745 PF06628 Catalase-related immune-responsive BI316_22750 PF00199 Catalase BI316_22750 PF06628 Catalase-related immune-responsive BI316_22760 PF06733 DEAD_2 BI316_22760 PF13307 Helicase C-terminal domain BI316_22775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BI316_22775 PF01488 Shikimate / quinate 5-dehydrogenase BI316_22775 PF08501 Shikimate dehydrogenase substrate binding domain BI316_22785 PF00667 FAD binding domain BI316_22785 PF00258 Flavodoxin BI316_22785 PF00175 Oxidoreductase NAD-binding domain BI316_22795 PF03466 LysR substrate binding domain BI316_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI316_22810 PF00490 Delta-aminolevulinic acid dehydratase BI316_22835 PF00326 Prolyl oligopeptidase family BI316_22835 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI316_22840 PF00043 Glutathione S-transferase, C-terminal domain BI316_22840 PF02798 Glutathione S-transferase, N-terminal domain BI316_22865 PF04820 Tryptophan halogenase BI316_22885 PF00005 ABC transporter BI316_22895 PF01381 Helix-turn-helix BI316_22905 PF01229 Glycosyl hydrolases family 39 BI316_22910 PF02583 Metal-sensitive transcriptional repressor BI316_22915 PF16916 Dimerisation domain of Zinc Transporter BI316_22915 PF01545 Cation efflux family BI316_22925 PF00593 TonB dependent receptor BI316_22925 PF07715 TonB-dependent Receptor Plug Domain BI316_22935 PF12833 Helix-turn-helix domain BI316_22935 PF01965 DJ-1/PfpI family BI316_22940 PF00175 Oxidoreductase NAD-binding domain BI316_22940 PF00111 2Fe-2S iron-sulfur cluster binding domain BI316_22940 PF00970 Oxidoreductase FAD-binding domain BI316_22945 PF00005 ABC transporter BI316_22950 PF01061 ABC-2 type transporter BI316_22960 PF08546 Ketopantoate reductase PanE/ApbA C terminal BI316_22960 PF02558 Ketopantoate reductase PanE/ApbA BI316_22995 PF00268 Ribonucleotide reductase, small chain BI316_23005 PF03477 ATP cone domain BI316_23005 PF02867 Ribonucleotide reductase, barrel domain BI316_23005 PF00317 Ribonucleotide reductase, all-alpha domain BI316_23020 PF13607 Succinyl-CoA ligase like flavodoxin domain BI316_23020 PF13380 CoA binding domain BI316_23020 PF00583 Acetyltransferase (GNAT) family BI316_23025 PF01769 Divalent cation transporter BI316_23025 PF00571 CBS domain BI316_23025 PF03448 MgtE intracellular N domain BI316_23040 PF02254 TrkA-N domain BI316_23040 PF00999 Sodium/hydrogen exchanger family BI316_23045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI316_23045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI316_23050 PF00723 Glycosyl hydrolases family 15 BI316_23065 PF05166 YcgL domain BI316_23070 PF00109 Beta-ketoacyl synthase, N-terminal domain BI316_23070 PF02801 Beta-ketoacyl synthase, C-terminal domain BI316_23080 PF00535 Glycosyl transferase family 2 BI316_23140 PF07977 FabA-like domain BI316_23145 PF01553 Acyltransferase BI316_23155 PF00550 Phosphopantetheine attachment site BI316_23160 PF04820 Tryptophan halogenase BI316_23185 PF00326 Prolyl oligopeptidase family BI316_23185 PF07676 WD40-like Beta Propeller Repeat BI316_23205 PF01218 Coproporphyrinogen III oxidase BI316_23215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI316_23215 PF01367 5'-3' exonuclease, C-terminal SAM fold BI316_23215 PF01612 3'-5' exonuclease BI316_23215 PF00476 DNA polymerase family A BI316_23245 PF00069 Protein kinase domain BI316_23245 PF03793 PASTA domain BI316_23285 PF04717 Type VI secretion system, phage-baseplate injector BI316_23300 PF03793 PASTA domain BI316_23300 PF00069 Protein kinase domain BI316_23310 PF04542 Sigma-70 region 2 BI316_23310 PF08281 Sigma-70, region 4 BI316_23330 PF00328 Histidine phosphatase superfamily (branch 2) BI316_23355 PF06834 TraU protein BI316_23455 PF13614 AAA domain BI316_23615 PF13307 Helicase C-terminal domain BI316_23615 PF06733 DEAD_2 BI316_23625 PF01966 HD domain BI316_23635 PF00486 Transcriptional regulatory protein, C terminal BI316_23635 PF00072 Response regulator receiver domain BI316_23655 PF13098 Thioredoxin-like domain BI316_23655 PF10411 Disulfide bond isomerase protein N-terminus BI316_23680 PF10135 Rod binding protein BI316_23680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI316_23710 PF04381 Putative exonuclease, RdgC BI316_23715 PF00565 Staphylococcal nuclease homologue BI316_23770 PF02195 ParB-like nuclease domain BI316_23770 PF17762 HTH domain found in ParB protein BI316_23805 PF00436 Single-strand binding protein family BI316_23830 PF04851 Type III restriction enzyme, res subunit BI316_23830 PF00271 Helicase conserved C-terminal domain BI316_23860 PF13361 UvrD-like helicase C-terminal domain BI316_23860 PF00580 UvrD/REP helicase N-terminal domain BI316_23925 PF02683 Cytochrome C biogenesis protein transmembrane region BI316_23925 PF11412 Disulphide bond corrector protein DsbC BI316_23930 PF13361 UvrD-like helicase C-terminal domain BI316_23930 PF00580 UvrD/REP helicase N-terminal domain BI316_24015 PF00529 HlyD membrane-fusion protein of T1SS BI316_24015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_24020 PF00873 AcrB/AcrD/AcrF family BI316_24035 PF00491 Arginase family BI316_24050 PF04945 YHS domain BI316_24055 PF05425 Copper resistance protein D BI316_24085 PF05275 Copper resistance protein B precursor (CopB) BI316_24090 PF00394 Multicopper oxidase BI316_24090 PF07731 Multicopper oxidase BI316_24090 PF07732 Multicopper oxidase BI316_24120 PF01043 SecA preprotein cross-linking domain BI316_24120 PF07517 SecA DEAD-like domain BI316_24120 PF02810 SEC-C motif BI316_24120 PF07516 SecA Wing and Scaffold domain BI316_24125 PF02583 Metal-sensitive transcriptional repressor BI316_24130 PF01545 Cation efflux family BI316_24130 PF16916 Dimerisation domain of Zinc Transporter BI316_24145 PF13175 AAA ATPase domain BI316_24160 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI316_24165 PF03960 ArsC family BI316_24170 PF03358 NADPH-dependent FMN reductase BI316_24175 PF02040 Arsenical pump membrane protein BI316_24185 PF00873 AcrB/AcrD/AcrF family BI316_24190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI316_24190 PF00529 HlyD membrane-fusion protein of T1SS BI316_24210 PF00376 MerR family regulatory protein BI316_24210 PF09278 MerR, DNA binding BI316_24220 PF01526 Tn3 transposase DDE domain BI316_24220 PF13700 Domain of unknown function (DUF4158) BI316_24240 PF00717 Peptidase S24-like BI316_24245 PF11798 IMS family HHH motif BI316_24245 PF11799 impB/mucB/samB family C-terminal domain BI316_24245 PF00817 impB/mucB/samB family BI316_24245 PF13438 Domain of unknown function (DUF4113) BI316_24415 PF07057 DNA helicase TraI BI316_24415 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI316_24415 PF18340 DNA relaxase TraI 2B/2B-like domain BI316_24415 PF08751 TrwC relaxase BI316_24415 PF08751 TrwC relaxase BI316_24415 PF18340 DNA relaxase TraI 2B/2B-like domain BI316_24415 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI316_24415 PF07057 DNA helicase TraI BI316_24475 PF07015 VirC1 protein BI316_24495 PF03377 TAL effector repeat BI316_24525 PF13406 Transglycosylase SLT domain BI316_24565 PF00239 Resolvase, N terminal domain BI316_24565 PF02796 Helix-turn-helix domain of resolvase BI316_24570 PF02796 Helix-turn-helix domain of resolvase BI316_24570 PF00239 Resolvase, N terminal domain BI316_24585 PF01526 Tn3 transposase DDE domain BI316_24585 PF13700 Domain of unknown function (DUF4158) BI316_24590 PF02810 SEC-C motif BI316_24590 PF03695 Uncharacterised protein family (UPF0149) BI316_24600 PF03377 TAL effector repeat BI316_24630 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BI316_24640 PF02796 Helix-turn-helix domain of resolvase BI316_24640 PF00239 Resolvase, N terminal domain BI316_24655 PF03695 Uncharacterised protein family (UPF0149) BI316_24655 PF02810 SEC-C motif BI316_24675 PF13700 Domain of unknown function (DUF4158) BI316_24675 PF01526 Tn3 transposase DDE domain BI316_24690 PF00239 Resolvase, N terminal domain BI316_24690 PF02796 Helix-turn-helix domain of resolvase BI316_24695 PF00239 Resolvase, N terminal domain BI316_24695 PF02796 Helix-turn-helix domain of resolvase BI316_24700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BI316_24730 PF13614 AAA domain BI316_24735 PF02195 ParB-like nuclease domain BI316_24735 PF06613 KorB C-terminal beta-barrel domain BI316_24735 PF08535 KorB domain BI316_24750 PF01527 Transposase BI316_24810 PF03524 Conjugal transfer protein BI316_24815 PF03743 Bacterial conjugation TrbI-like protein BI316_24820 PF00437 Type II/IV secretion system protein BI316_24825 PF01464 Transglycosylase SLT domain BI316_24845 PF01464 Transglycosylase SLT domain BI316_24850 PF01396 Topoisomerase DNA binding C4 zinc finger BI316_24850 PF01131 DNA topoisomerase BI316_24850 PF01751 Toprim domain BI316_24855 PF04956 TrbC/VIRB2 family BI316_24860 PF05101 Type IV secretory pathway, VirB3-like protein BI316_24865 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI316_24870 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI316_24875 PF07996 Type IV secretion system proteins BI316_24885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI316_24890 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BI316_24895 PF04335 VirB8 protein BI316_24900 PF03524 Conjugal transfer protein BI316_24905 PF03743 Bacterial conjugation TrbI-like protein BI316_24910 PF00437 Type II/IV secretion system protein BI316_24915 PF02534 Type IV secretory system Conjugative DNA transfer BI316_24950 PF02195 ParB-like nuclease domain BI316_24955 PF13614 AAA domain BI316_25025 PF01936 NYN domain BI316_25025 PF09722 Protein of unknown function (DUF2384) BI316_25040 PF03377 TAL effector repeat BI316_25050 PF02810 SEC-C motif BI316_25050 PF03695 Uncharacterised protein family (UPF0149) BI316_25055 PF01526 Tn3 transposase DDE domain BI316_25055 PF13700 Domain of unknown function (DUF4158) BI316_25070 PF02796 Helix-turn-helix domain of resolvase BI316_25070 PF00239 Resolvase, N terminal domain BI316_25080 PF02661 Fic/DOC family BI316_25080 PF17841 BID domain of Bartonella effector protein (Bep)