locus-tag class description BI315_00015 PF00072 Response regulator receiver domain BI315_00015 PF04397 LytTr DNA-binding domain BI315_00020 PF00472 RF-1 domain BI315_00020 PF03462 PCRF domain BI315_00025 PF00152 tRNA synthetases class II (D, K and N) BI315_00025 PF01336 OB-fold nucleic acid binding domain BI315_00030 PF00072 Response regulator receiver domain BI315_00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_00035 PF00512 His Kinase A (phospho-acceptor) domain BI315_00035 PF01627 Hpt domain BI315_00035 PF00072 Response regulator receiver domain BI315_00040 PF00378 Enoyl-CoA hydratase/isomerase BI315_00045 PF13193 AMP-binding enzyme C-terminal domain BI315_00045 PF00501 AMP-binding enzyme BI315_00055 PF00694 Aconitase C-terminal domain BI315_00055 PF00330 Aconitase family (aconitate hydratase) BI315_00070 PF06434 Aconitate hydratase 2 N-terminus BI315_00070 PF00330 Aconitase family (aconitate hydratase) BI315_00070 PF11791 Aconitate B N-terminal domain BI315_00075 PF00561 alpha/beta hydrolase fold BI315_00080 PF00990 Diguanylate cyclase, GGDEF domain BI315_00080 PF03707 Bacterial signalling protein N terminal repeat BI315_00080 PF00563 EAL domain BI315_00085 PF00072 Response regulator receiver domain BI315_00085 PF01339 CheB methylesterase BI315_00090 PF03975 CheD chemotactic sensory transduction BI315_00095 PF03705 CheR methyltransferase, all-alpha domain BI315_00095 PF01739 CheR methyltransferase, SAM binding domain BI315_00100 PF00672 HAMP domain BI315_00100 PF02203 Tar ligand binding domain homologue BI315_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00110 PF01584 CheW-like domain BI315_00115 PF07317 Flagellar regulator YcgR BI315_00115 PF07238 PilZ domain BI315_00125 PF02203 Tar ligand binding domain homologue BI315_00125 PF00672 HAMP domain BI315_00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00130 PF00672 HAMP domain BI315_00130 PF02203 Tar ligand binding domain homologue BI315_00135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00135 PF00672 HAMP domain BI315_00135 PF02203 Tar ligand binding domain homologue BI315_00140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00140 PF02203 Tar ligand binding domain homologue BI315_00140 PF00672 HAMP domain BI315_00145 PF00672 HAMP domain BI315_00145 PF02203 Tar ligand binding domain homologue BI315_00145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00155 PF00672 HAMP domain BI315_00155 PF02203 Tar ligand binding domain homologue BI315_00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00160 PF00672 HAMP domain BI315_00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00160 PF02203 Tar ligand binding domain homologue BI315_00165 PF02203 Tar ligand binding domain homologue BI315_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00165 PF00672 HAMP domain BI315_00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00170 PF02203 Tar ligand binding domain homologue BI315_00170 PF00672 HAMP domain BI315_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00185 PF00672 HAMP domain BI315_00185 PF02203 Tar ligand binding domain homologue BI315_00190 PF17200 Single Cache domain 2 BI315_00190 PF00672 HAMP domain BI315_00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00200 PF00672 HAMP domain BI315_00200 PF02203 Tar ligand binding domain homologue BI315_00205 PF09078 CheY binding BI315_00205 PF01584 CheW-like domain BI315_00205 PF02895 Signal transducing histidine kinase, homodimeric domain BI315_00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_00205 PF01627 Hpt domain BI315_00210 PF00072 Response regulator receiver domain BI315_00225 PF13614 AAA domain BI315_00230 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI315_00230 PF00691 OmpA family BI315_00235 PF01618 MotA/TolQ/ExbB proton channel family BI315_00255 PF00069 Protein kinase domain BI315_00255 PF03793 PASTA domain BI315_00310 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BI315_00350 PF04055 Radical SAM superfamily BI315_00350 PF13186 Iron-sulfur cluster-binding domain BI315_00370 PF02895 Signal transducing histidine kinase, homodimeric domain BI315_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_00370 PF01627 Hpt domain BI315_00370 PF07194 P2 response regulator binding domain BI315_00370 PF01584 CheW-like domain BI315_00375 PF04344 Chemotaxis phosphatase, CheZ BI315_00380 PF00072 Response regulator receiver domain BI315_00385 PF04545 Sigma-70, region 4 BI315_00385 PF04542 Sigma-70 region 2 BI315_00385 PF04539 Sigma-70 region 3 BI315_00390 PF10609 NUBPL iron-transfer P-loop NTPase BI315_00395 PF00448 SRP54-type protein, GTPase domain BI315_00400 PF00771 FHIPEP family BI315_00405 PF01312 FlhB HrpN YscU SpaS Family BI315_00410 PF03707 Bacterial signalling protein N terminal repeat BI315_00410 PF00990 Diguanylate cyclase, GGDEF domain BI315_00410 PF00563 EAL domain BI315_00415 PF00563 EAL domain BI315_00415 PF03707 Bacterial signalling protein N terminal repeat BI315_00415 PF13188 PAS domain BI315_00415 PF00990 Diguanylate cyclase, GGDEF domain BI315_00425 PF00563 EAL domain BI315_00425 PF00990 Diguanylate cyclase, GGDEF domain BI315_00425 PF03707 Bacterial signalling protein N terminal repeat BI315_00425 PF13188 PAS domain BI315_00430 PF01311 Bacterial export proteins, family 1 BI315_00435 PF01313 Bacterial export proteins, family 3 BI315_00445 PF00813 FliP family BI315_00450 PF04347 Flagellar biosynthesis protein, FliO BI315_00455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI315_00460 PF02154 Flagellar motor switch protein FliM BI315_00460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI315_00480 PF18269 T3SS EscN ATPase C-terminal domain BI315_00480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI315_00490 PF14842 FliG N-terminal domain BI315_00490 PF01706 FliG C-terminal domain BI315_00490 PF14841 FliG middle domain BI315_00495 PF08345 Flagellar M-ring protein C-terminal BI315_00495 PF01514 Secretory protein of YscJ/FliF family BI315_00500 PF02049 Flagellar hook-basal body complex protein FliE BI315_00505 PF00534 Glycosyl transferases group 1 BI315_00505 PF00535 Glycosyl transferase family 2 BI315_00540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI315_00540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI315_00550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI315_00555 PF00158 Sigma-54 interaction domain BI315_00555 PF00072 Response regulator receiver domain BI315_00555 PF02954 Bacterial regulatory protein, Fis family BI315_00560 PF00072 Response regulator receiver domain BI315_00560 PF01339 CheB methylesterase BI315_00565 PF04552 Sigma-54, DNA binding domain BI315_00565 PF04963 Sigma-54 factor, core binding domain BI315_00565 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI315_00570 PF00196 Bacterial regulatory proteins, luxR family BI315_00570 PF00072 Response regulator receiver domain BI315_00585 PF02561 Flagellar protein FliS BI315_00590 PF02465 Flagellar hook-associated protein 2 N-terminus BI315_00590 PF07196 Flagellin hook IN motif BI315_00590 PF07195 Flagellar hook-associated protein 2 C-terminus BI315_00595 PF00669 Bacterial flagellin N-terminal helical region BI315_00595 PF00700 Bacterial flagellin C-terminal helical region BI315_00600 PF00669 Bacterial flagellin N-terminal helical region BI315_00600 PF00700 Bacterial flagellin C-terminal helical region BI315_00605 PF07196 Flagellin hook IN motif BI315_00605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI315_00610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI315_00610 PF10135 Rod binding protein BI315_00615 PF02119 Flagellar P-ring protein BI315_00620 PF02107 Flagellar L-ring protein BI315_00625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI315_00625 PF00460 Flagella basal body rod protein BI315_00635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI315_00635 PF00460 Flagella basal body rod protein BI315_00640 PF00460 Flagella basal body rod protein BI315_00640 PF07559 Flagellar basal body protein FlaE BI315_00640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI315_00645 PF03963 Flagellar hook capping protein - N-terminal region BI315_00650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI315_00650 PF00460 Flagella basal body rod protein BI315_00660 PF00072 Response regulator receiver domain BI315_00660 PF01584 CheW-like domain BI315_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_00685 PF13426 PAS domain BI315_00685 PF13188 PAS domain BI315_00685 PF00512 His Kinase A (phospho-acceptor) domain BI315_00685 PF00989 PAS fold BI315_00690 PF00990 Diguanylate cyclase, GGDEF domain BI315_00690 PF00563 EAL domain BI315_00690 PF03707 Bacterial signalling protein N terminal repeat BI315_00695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_00695 PF07730 Histidine kinase BI315_00700 PF03707 Bacterial signalling protein N terminal repeat BI315_00700 PF00990 Diguanylate cyclase, GGDEF domain BI315_00700 PF00563 EAL domain BI315_00710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_00710 PF12729 Four helix bundle sensory module for signal transduction BI315_00710 PF00672 HAMP domain BI315_00715 PF04356 Protein of unknown function (DUF489) BI315_00725 PF00293 NUDIX domain BI315_00730 PF02617 ATP-dependent Clp protease adaptor protein ClpS BI315_00735 PF00004 ATPase family associated with various cellular activities (AAA) BI315_00735 PF10431 C-terminal, D2-small domain, of ClpB protein BI315_00735 PF02861 Clp amino terminal domain, pathogenicity island component BI315_00735 PF17871 AAA lid domain BI315_00735 PF07724 AAA domain (Cdc48 subfamily) BI315_00740 PF01176 Translation initiation factor 1A / IF-1 BI315_00745 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BI315_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_00760 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BI315_00760 PF01580 FtsK/SpoIIIE family BI315_00760 PF09397 Ftsk gamma domain BI315_00760 PF17854 FtsK alpha domain BI315_00770 PF03548 Outer membrane lipoprotein carrier protein LolA BI315_00780 PF16193 AAA C-terminal domain BI315_00780 PF00004 ATPase family associated with various cellular activities (AAA) BI315_00780 PF12002 MgsA AAA+ ATPase C terminal BI315_00785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BI315_00795 PF02803 Thiolase, C-terminal domain BI315_00795 PF00108 Thiolase, N-terminal domain BI315_00800 PF00378 Enoyl-CoA hydratase/isomerase BI315_00800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI315_00800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI315_00810 PF00334 Nucleoside diphosphate kinase BI315_00815 PF04055 Radical SAM superfamily BI315_00825 PF13464 Domain of unknown function (DUF4115) BI315_00835 PF13360 PQQ-like domain BI315_00835 PF01011 PQQ enzyme repeat BI315_00840 PF01926 50S ribosome-binding GTPase BI315_00840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BI315_00845 PF00994 Probable molybdopterin binding domain BI315_00845 PF03453 MoeA N-terminal region (domain I and II) BI315_00845 PF03454 MoeA C-terminal region (domain IV) BI315_00850 PF00899 ThiF family BI315_00880 PF08240 Alcohol dehydrogenase GroES-like domain BI315_00880 PF13823 Alcohol dehydrogenase GroES-associated BI315_00880 PF00107 Zinc-binding dehydrogenase BI315_00890 PF03372 Endonuclease/Exonuclease/phosphatase family BI315_00900 PF03454 MoeA C-terminal region (domain IV) BI315_00900 PF03453 MoeA N-terminal region (domain I and II) BI315_00900 PF00994 Probable molybdopterin binding domain BI315_00905 PF12804 MobA-like NTP transferase domain BI315_00915 PF00561 alpha/beta hydrolase fold BI315_00920 PF01566 Natural resistance-associated macrophage protein BI315_00925 PF01325 Iron dependent repressor, N-terminal DNA binding domain BI315_00925 PF02742 Iron dependent repressor, metal binding and dimerisation domain BI315_00930 PF14437 MafB19-like deaminase BI315_00935 PF00929 Exonuclease BI315_00940 PF05552 Conserved TM helix BI315_00940 PF00924 Mechanosensitive ion channel BI315_00945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BI315_00945 PF00391 PEP-utilising enzyme, mobile domain BI315_00945 PF02896 PEP-utilising enzyme, TIM barrel domain BI315_00950 PF03618 Kinase/pyrophosphorylase BI315_00970 PF01066 CDP-alcohol phosphatidyltransferase BI315_00980 PF00561 alpha/beta hydrolase fold BI315_00995 PF01266 FAD dependent oxidoreductase BI315_00995 PF00355 Rieske [2Fe-2S] domain BI315_01005 PF16921 Tex protein YqgF-like domain BI315_01005 PF09371 Tex-like protein N-terminal domain BI315_01005 PF00575 S1 RNA binding domain BI315_01005 PF17674 HHH domain BI315_01010 PF00512 His Kinase A (phospho-acceptor) domain BI315_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_01010 PF09308 LuxQ, periplasmic BI315_01010 PF00072 Response regulator receiver domain BI315_01060 PF00034 Cytochrome c BI315_01075 PF00873 AcrB/AcrD/AcrF family BI315_01080 PF00873 AcrB/AcrD/AcrF family BI315_01090 PF01081 KDPG and KHG aldolase BI315_01095 PF00920 Dehydratase family BI315_01100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BI315_01105 PF02685 Glucokinase BI315_01110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI315_01110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI315_01115 PF00005 ABC transporter BI315_01115 PF17912 MalK OB fold domain BI315_01130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI315_01135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI315_01140 PF02910 Fumarate reductase flavoprotein C-term BI315_01140 PF00890 FAD binding domain BI315_01150 PF13085 2Fe-2S iron-sulfur cluster binding domain BI315_01155 PF03937 Flavinator of succinate dehydrogenase BI315_01165 PF02687 FtsX-like permease family BI315_01165 PF12704 MacB-like periplasmic core domain BI315_01170 PF00005 ABC transporter BI315_01180 PF00753 Metallo-beta-lactamase superfamily BI315_01180 PF03772 Competence protein BI315_01185 PF01618 MotA/TolQ/ExbB proton channel family BI315_01195 PF00664 ABC transporter transmembrane region BI315_01195 PF00005 ABC transporter BI315_01200 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BI315_01205 PF02348 Cytidylyltransferase BI315_01210 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI315_01220 PF02151 UvrB/uvrC motif BI315_01220 PF08459 UvrC Helix-hairpin-helix N-terminal BI315_01220 PF01541 GIY-YIG catalytic domain BI315_01225 PF01066 CDP-alcohol phosphatidyltransferase BI315_01250 PF00550 Phosphopantetheine attachment site BI315_01250 PF00668 Condensation domain BI315_01250 PF00975 Thioesterase domain BI315_01250 PF13193 AMP-binding enzyme C-terminal domain BI315_01250 PF00501 AMP-binding enzyme BI315_01255 PF01648 4'-phosphopantetheinyl transferase superfamily BI315_01255 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BI315_01265 PF01527 Transposase BI315_01275 PF13276 HTH-like domain BI315_01275 PF13333 Integrase core domain BI315_01275 PF00665 Integrase core domain BI315_01285 PF00589 Phage integrase family BI315_01295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI315_01295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI315_01295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI315_01305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI315_01320 PF00072 Response regulator receiver domain BI315_01320 PF00196 Bacterial regulatory proteins, luxR family BI315_01325 PF00575 S1 RNA binding domain BI315_01325 PF12111 Polyribonucleotide phosphorylase C terminal BI315_01325 PF10150 Ribonuclease E/G family BI315_01330 PF01479 S4 domain BI315_01330 PF00849 RNA pseudouridylate synthase BI315_01335 PF11737 Protein of unknown function (DUF3300) BI315_01340 PF02535 ZIP Zinc transporter BI315_01350 PF01329 Pterin 4 alpha carbinolamine dehydratase BI315_01355 PF01106 NifU-like domain BI315_01400 PF12697 Alpha/beta hydrolase family BI315_01400 PF08241 Methyltransferase domain BI315_01410 PF00106 short chain dehydrogenase BI315_01445 PF02303 Helix-destabilising protein BI315_01480 PF01494 FAD binding domain BI315_01485 PF09335 SNARE associated Golgi protein BI315_01500 PF07995 Glucose / Sorbosone dehydrogenase BI315_01510 PF00144 Beta-lactamase BI315_01520 PF00072 Response regulator receiver domain BI315_01520 PF04397 LytTr DNA-binding domain BI315_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_01525 PF07694 5TMR of 5TMR-LYT BI315_01525 PF06580 Histidine kinase BI315_01540 PF00082 Subtilase family BI315_01540 PF03797 Autotransporter beta-domain BI315_01550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_01555 PF00873 AcrB/AcrD/AcrF family BI315_01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_01565 PF00512 His Kinase A (phospho-acceptor) domain BI315_01565 PF00072 Response regulator receiver domain BI315_01565 PF08448 PAS fold BI315_01565 PF13426 PAS domain BI315_01570 PF00072 Response regulator receiver domain BI315_01570 PF00196 Bacterial regulatory proteins, luxR family BI315_01575 PF12951 Passenger-associated-transport-repeat BI315_01575 PF12951 Passenger-associated-transport-repeat BI315_01580 PF08448 PAS fold BI315_01580 PF00563 EAL domain BI315_01580 PF08447 PAS fold BI315_01580 PF00990 Diguanylate cyclase, GGDEF domain BI315_01600 PF05974 Domain of unknown function (DUF892) BI315_01625 PF14824 Sirohaem biosynthesis protein central BI315_01625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI315_01625 PF10414 Sirohaem synthase dimerisation region BI315_01640 PF05977 Transmembrane secretion effector BI315_01655 PF00857 Isochorismatase family BI315_01670 PF00072 Response regulator receiver domain BI315_01670 PF00196 Bacterial regulatory proteins, luxR family BI315_01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_01685 PF03466 LysR substrate binding domain BI315_01690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI315_01690 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BI315_01690 PF00361 Proton-conducting membrane transporter BI315_01695 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BI315_01710 PF01381 Helix-turn-helix BI315_01715 PF05284 Protein of unknown function (DUF736) BI315_01720 PF04002 RadC-like JAB domain BI315_01745 PF00589 Phage integrase family BI315_01745 PF13356 Arm DNA-binding domain BI315_01760 PF07715 TonB-dependent Receptor Plug Domain BI315_01760 PF00593 TonB dependent receptor BI315_01780 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BI315_01805 PF07715 TonB-dependent Receptor Plug Domain BI315_01805 PF00593 TonB dependent receptor BI315_01815 PF10947 Protein of unknown function (DUF2628) BI315_01845 PF03412 Peptidase C39 family BI315_01845 PF00005 ABC transporter BI315_01845 PF00664 ABC transporter transmembrane region BI315_01855 PF13614 AAA domain BI315_01895 PF01751 Toprim domain BI315_01895 PF01131 DNA topoisomerase BI315_01900 PF00145 C-5 cytosine-specific DNA methylase BI315_01950 PF06250 YhcG PDDEXK nuclease domain BI315_01950 PF17761 DUF1016 N-terminal domain BI315_01965 PF00892 EamA-like transporter family BI315_01970 PF00892 EamA-like transporter family BI315_01980 PF02525 Flavodoxin-like fold BI315_01985 PF00043 Glutathione S-transferase, C-terminal domain BI315_01985 PF02798 Glutathione S-transferase, N-terminal domain BI315_01990 PF05544 Proline racemase BI315_01995 PF03358 NADPH-dependent FMN reductase BI315_02005 PF07690 Major Facilitator Superfamily BI315_02010 PF02311 AraC-like ligand binding domain BI315_02010 PF12833 Helix-turn-helix domain BI315_02160 PF00580 UvrD/REP helicase N-terminal domain BI315_02160 PF12462 DNA helicase IV / RNA helicase N terminal BI315_02160 PF13361 UvrD-like helicase C-terminal domain BI315_02235 PF03466 LysR substrate binding domain BI315_02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_02240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI315_02240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI315_02245 PF03401 Tripartite tricarboxylate transporter family receptor BI315_02260 PF04002 RadC-like JAB domain BI315_02295 PF00589 Phage integrase family BI315_02295 PF13356 Arm DNA-binding domain BI315_02300 PF02540 NAD synthase BI315_02300 PF00958 GMP synthase C terminal domain BI315_02300 PF00117 Glutamine amidotransferase class-I BI315_02305 PF00478 IMP dehydrogenase / GMP reductase domain BI315_02305 PF00571 CBS domain BI315_02310 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BI315_02310 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BI315_02320 PF02254 TrkA-N domain BI315_02320 PF00999 Sodium/hydrogen exchanger family BI315_02325 PF00483 Nucleotidyl transferase BI315_02330 PF02719 Polysaccharide biosynthesis protein BI315_02335 PF00953 Glycosyl transferase family 4 BI315_02340 PF18073 Rubredoxin metal binding domain BI315_02350 PF00216 Bacterial DNA-binding protein BI315_02355 PF00575 S1 RNA binding domain BI315_02360 PF02224 Cytidylate kinase BI315_02365 PF00444 Ribosomal protein L36 BI315_02380 PF04371 Porphyromonas-type peptidyl-arginine deiminase BI315_02385 PF00795 Carbon-nitrogen hydrolase BI315_02410 PF00528 Binding-protein-dependent transport system inner membrane component BI315_02415 PF00528 Binding-protein-dependent transport system inner membrane component BI315_02435 PF00356 Bacterial regulatory proteins, lacI family BI315_02445 PF03795 YCII-related domain BI315_02450 PF02616 Segregation and condensation protein ScpA BI315_02455 PF04079 Segregation and condensation complex subunit ScpB BI315_02460 PF00849 RNA pseudouridylate synthase BI315_02460 PF01479 S4 domain BI315_02475 PF00795 Carbon-nitrogen hydrolase BI315_02480 PF00155 Aminotransferase class I and II BI315_02485 PF00005 ABC transporter BI315_02490 PF03379 CcmB protein BI315_02495 PF01578 Cytochrome C assembly protein BI315_02505 PF03100 CcmE BI315_02510 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI315_02510 PF01578 Cytochrome C assembly protein BI315_02515 PF08534 Redoxin BI315_02520 PF03918 Cytochrome C biogenesis protein BI315_02530 PF00561 alpha/beta hydrolase fold BI315_02535 PF00313 'Cold-shock' DNA-binding domain BI315_02540 PF00664 ABC transporter transmembrane region BI315_02540 PF00005 ABC transporter BI315_02545 PF00664 ABC transporter transmembrane region BI315_02545 PF00005 ABC transporter BI315_02550 PF01654 Cytochrome bd terminal oxidase subunit I BI315_02555 PF02322 Cytochrome bd terminal oxidase subunit II BI315_02585 PF00171 Aldehyde dehydrogenase family BI315_02600 PF00206 Lyase BI315_02605 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI315_02615 PF00696 Amino acid kinase family BI315_02615 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BI315_02630 PF00764 Arginosuccinate synthase BI315_02635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI315_02635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI315_02645 PF01406 tRNA synthetases class I (C) catalytic domain BI315_02645 PF09190 DALR domain BI315_02650 PF02657 Fe-S metabolism associated domain BI315_02660 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI315_02665 PF01809 Putative membrane protein insertion efficiency factor BI315_02670 PF01979 Amidohydrolase family BI315_02675 PF01551 Peptidase family M23 BI315_02675 PF08460 Bacterial SH3 domain BI315_02695 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BI315_02700 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BI315_02710 PF00753 Metallo-beta-lactamase superfamily BI315_02735 PF01527 Transposase BI315_02750 PF00295 Glycosyl hydrolases family 28 BI315_02760 PF13419 Haloacid dehalogenase-like hydrolase BI315_02770 PF01979 Amidohydrolase family BI315_02780 PF01132 Elongation factor P (EF-P) OB domain BI315_02780 PF08207 Elongation factor P (EF-P) KOW-like domain BI315_02780 PF09285 Elongation factor P, C-terminal BI315_02785 PF04055 Radical SAM superfamily BI315_02790 PF13188 PAS domain BI315_02790 PF00563 EAL domain BI315_02790 PF00990 Diguanylate cyclase, GGDEF domain BI315_02790 PF03707 Bacterial signalling protein N terminal repeat BI315_02800 PF00588 SpoU rRNA Methylase family BI315_02805 PF00459 Inositol monophosphatase family BI315_02815 PF00545 ribonuclease BI315_02835 PF03880 DbpA RNA binding domain BI315_02835 PF00270 DEAD/DEAH box helicase BI315_02835 PF00271 Helicase conserved C-terminal domain BI315_02840 PF00156 Phosphoribosyl transferase domain BI315_02845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BI315_02850 PF00135 Carboxylesterase family BI315_02855 PF14497 Glutathione S-transferase, C-terminal domain BI315_02855 PF02798 Glutathione S-transferase, N-terminal domain BI315_02860 PF00313 'Cold-shock' DNA-binding domain BI315_02865 PF07152 YaeQ protein BI315_02875 PF00072 Response regulator receiver domain BI315_02875 PF00990 Diguanylate cyclase, GGDEF domain BI315_02875 PF00563 EAL domain BI315_02880 PF01435 Peptidase family M48 BI315_02885 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI315_02890 PF00106 short chain dehydrogenase BI315_02895 PF07879 PHB/PHA accumulation regulator DNA-binding domain BI315_02895 PF05233 PHB accumulation regulatory domain BI315_02915 PF01119 DNA mismatch repair protein, C-terminal domain BI315_02915 PF08676 MutL C terminal dimerisation domain BI315_02920 PF11741 AMIN domain BI315_02920 PF01520 N-acetylmuramoyl-L-alanine amidase BI315_02925 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BI315_02930 PF03853 YjeF-related protein N-terminus BI315_02930 PF01256 Carbohydrate kinase BI315_02935 PF08331 Domain of unknown function (DUF1730) BI315_02940 PF02601 Exonuclease VII, large subunit BI315_02940 PF13742 OB-fold nucleic acid binding domain BI315_02950 PF03781 Sulfatase-modifying factor enzyme 1 BI315_02965 PF00570 HRDC domain BI315_02965 PF01612 3'-5' exonuclease BI315_02970 PF04679 ATP dependent DNA ligase C terminal region BI315_02970 PF13298 DNA polymerase Ligase (LigD) BI315_02970 PF01068 ATP dependent DNA ligase domain BI315_02990 PF00589 Phage integrase family BI315_03015 PF05598 Transposase domain (DUF772) BI315_03025 PF01527 Transposase BI315_03045 PF14850 DNA-binding domain of Proline dehydrogenase BI315_03045 PF01619 Proline dehydrogenase BI315_03045 PF00171 Aldehyde dehydrogenase family BI315_03045 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI315_03060 PF13276 HTH-like domain BI315_03060 PF00665 Integrase core domain BI315_03060 PF13333 Integrase core domain BI315_03065 PF00239 Resolvase, N terminal domain BI315_03065 PF02796 Helix-turn-helix domain of resolvase BI315_03080 PF02384 N-6 DNA Methylase BI315_03085 PF09572 XamI restriction endonuclease BI315_03135 PF01584 CheW-like domain BI315_03140 PF00672 HAMP domain BI315_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_03140 PF02743 Cache domain BI315_03145 PF02245 Methylpurine-DNA glycosylase (MPG) BI315_03150 PF00271 Helicase conserved C-terminal domain BI315_03150 PF08494 DEAD/H associated BI315_03150 PF00270 DEAD/DEAH box helicase BI315_03170 PF04386 Stringent starvation protein B BI315_03175 PF02798 Glutathione S-transferase, N-terminal domain BI315_03175 PF00043 Glutathione S-transferase, C-terminal domain BI315_03180 PF02167 Cytochrome C1 family BI315_03185 PF00033 Cytochrome b/b6/petB BI315_03185 PF00032 Cytochrome b(C-terminal)/b6/petD BI315_03190 PF00355 Rieske [2Fe-2S] domain BI315_03190 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BI315_03200 PF01464 Transglycosylase SLT domain BI315_03215 PF04055 Radical SAM superfamily BI315_03215 PF00919 Uncharacterized protein family UPF0004 BI315_03215 PF01938 TRAM domain BI315_03220 PF02562 PhoH-like protein BI315_03230 PF02130 Uncharacterized protein family UPF0054 BI315_03240 PF00571 CBS domain BI315_03240 PF03471 Transporter associated domain BI315_03255 PF00171 Aldehyde dehydrogenase family BI315_03260 PF00528 Binding-protein-dependent transport system inner membrane component BI315_03265 PF00528 Binding-protein-dependent transport system inner membrane component BI315_03270 PF08402 TOBE domain BI315_03270 PF00005 ABC transporter BI315_03275 PF02321 Outer membrane efflux protein BI315_03280 PF07690 Major Facilitator Superfamily BI315_03285 PF13533 Biotin-lipoyl like BI315_03290 PF13416 Bacterial extracellular solute-binding protein BI315_03295 PF00202 Aminotransferase class-III BI315_03300 PF00120 Glutamine synthetase, catalytic domain BI315_03305 PF07722 Peptidase C26 BI315_03310 PF00120 Glutamine synthetase, catalytic domain BI315_03315 PF01266 FAD dependent oxidoreductase BI315_03320 PF00072 Response regulator receiver domain BI315_03320 PF00990 Diguanylate cyclase, GGDEF domain BI315_03325 PF01814 Hemerythrin HHE cation binding domain BI315_03330 PF07690 Major Facilitator Superfamily BI315_03330 PF00083 Sugar (and other) transporter BI315_03340 PF00384 Molybdopterin oxidoreductase BI315_03345 PF02634 FdhD/NarQ family BI315_03350 PF07690 Major Facilitator Superfamily BI315_03365 PF00202 Aminotransferase class-III BI315_03375 PF04286 Protein of unknown function (DUF445) BI315_03380 PF00072 Response regulator receiver domain BI315_03380 PF00512 His Kinase A (phospho-acceptor) domain BI315_03380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI315_03380 PF00672 HAMP domain BI315_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_03380 PF01627 Hpt domain BI315_03385 PF00072 Response regulator receiver domain BI315_03390 PF07690 Major Facilitator Superfamily BI315_03400 PF05088 Bacterial NAD-glutamate dehydrogenase BI315_03410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_03410 PF00529 HlyD membrane-fusion protein of T1SS BI315_03415 PF00873 AcrB/AcrD/AcrF family BI315_03420 PF00356 Bacterial regulatory proteins, lacI family BI315_03425 PF00381 PTS HPr component phosphorylation site BI315_03425 PF02896 PEP-utilising enzyme, TIM barrel domain BI315_03425 PF00391 PEP-utilising enzyme, mobile domain BI315_03425 PF05524 PEP-utilising enzyme, N-terminal BI315_03425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI315_03430 PF00294 pfkB family carbohydrate kinase BI315_03435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BI315_03480 PF02355 Protein export membrane protein BI315_03480 PF07549 SecD/SecF GG Motif BI315_03485 PF07549 SecD/SecF GG Motif BI315_03485 PF13721 SecD export protein N-terminal TM region BI315_03485 PF02355 Protein export membrane protein BI315_03490 PF02699 Preprotein translocase subunit BI315_03495 PF01702 Queuine tRNA-ribosyltransferase BI315_03500 PF02547 Queuosine biosynthesis protein BI315_03540 PF02927 Cellulase N-terminal ig-like domain BI315_03540 PF00759 Glycosyl hydrolase family 9 BI315_03550 PF00037 4Fe-4S binding domain BI315_03565 PF01467 Cytidylyltransferase-like BI315_03575 PF00183 Hsp90 protein BI315_03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_03595 PF07715 TonB-dependent Receptor Plug Domain BI315_03595 PF00593 TonB dependent receptor BI315_03605 PF04616 Glycosyl hydrolases family 43 BI315_03610 PF07532 Bacterial Ig-like domain (group 4) BI315_03615 PF00593 TonB dependent receptor BI315_03615 PF07715 TonB-dependent Receptor Plug Domain BI315_03625 PF09286 Pro-kumamolisin, activation domain BI315_03625 PF00082 Subtilase family BI315_03655 PF13520 Amino acid permease BI315_03670 PF00557 Metallopeptidase family M24 BI315_03670 PF01321 Creatinase/Prolidase N-terminal domain BI315_03675 PF00171 Aldehyde dehydrogenase family BI315_03680 PF00701 Dihydrodipicolinate synthetase family BI315_03685 PF04324 BFD-like [2Fe-2S] binding domain BI315_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_03695 PF01266 FAD dependent oxidoreductase BI315_03700 PF05544 Proline racemase BI315_03710 PF02881 SRP54-type protein, helical bundle domain BI315_03710 PF00448 SRP54-type protein, GTPase domain BI315_03720 PF00730 HhH-GPD superfamily base excision DNA repair protein BI315_03720 PF10576 Iron-sulfur binding domain of endonuclease III BI315_03720 PF14815 NUDIX domain BI315_03720 PF00633 Helix-hairpin-helix motif BI315_03725 PF04362 Bacterial Fe(2+) trafficking BI315_03730 PF13426 PAS domain BI315_03730 PF00072 Response regulator receiver domain BI315_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_03760 PF08212 Lipocalin-like domain BI315_03775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_03775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_03775 PF12806 Acetyl-CoA dehydrogenase C-terminal like BI315_03775 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_03785 PF02779 Transketolase, pyrimidine binding domain BI315_03785 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BI315_03785 PF02780 Transketolase, C-terminal domain BI315_03805 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI315_03810 PF00753 Metallo-beta-lactamase superfamily BI315_03810 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI315_03815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI315_03815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI315_03830 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI315_03845 PF14667 Polysaccharide biosynthesis C-terminal domain BI315_03855 PF00534 Glycosyl transferases group 1 BI315_03855 PF13439 Glycosyltransferase Family 4 BI315_03875 PF02397 Bacterial sugar transferase BI315_03895 PF13411 MerR HTH family regulatory protein BI315_03900 PF00216 Bacterial DNA-binding protein BI315_03905 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BI315_03905 PF01588 Putative tRNA binding domain BI315_03905 PF03147 Ferredoxin-fold anticodon binding domain BI315_03905 PF03483 B3/4 domain BI315_03905 PF03484 tRNA synthetase B5 domain BI315_03910 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BI315_03910 PF01409 tRNA synthetases class II core domain (F) BI315_03915 PF00453 Ribosomal protein L20 BI315_03920 PF01632 Ribosomal protein L35 BI315_03925 PF00707 Translation initiation factor IF-3, C-terminal domain BI315_03925 PF05198 Translation initiation factor IF-3, N-terminal domain BI315_03930 PF02824 TGS domain BI315_03930 PF03129 Anticodon binding domain BI315_03930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI315_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI315_03935 PF00356 Bacterial regulatory proteins, lacI family BI315_03940 PF00686 Starch binding domain BI315_03940 PF00128 Alpha amylase, catalytic domain BI315_03945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BI315_03955 PF10566 Glycoside hydrolase 97 BI315_03955 PF14508 Glycosyl-hydrolase 97 N-terminal BI315_03955 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI315_03970 PF01527 Transposase BI315_03980 PF00128 Alpha amylase, catalytic domain BI315_03985 PF01527 Transposase BI315_04040 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI315_04045 PF05101 Type IV secretory pathway, VirB3-like protein BI315_04055 PF01464 Transglycosylase SLT domain BI315_04060 PF00437 Type II/IV secretion system protein BI315_04065 PF03743 Bacterial conjugation TrbI-like protein BI315_04085 PF02534 Type IV secretory system Conjugative DNA transfer BI315_04100 PF00271 Helicase conserved C-terminal domain BI315_04100 PF04851 Type III restriction enzyme, res subunit BI315_04100 PF12344 Ultra-violet resistance protein B BI315_04100 PF17757 UvrB interaction domain BI315_04100 PF02151 UvrB/uvrC motif BI315_04185 PF01555 DNA methylase BI315_04240 PF00182 Chitinase class I BI315_04310 PF00114 Pilin (bacterial filament) BI315_04310 PF07963 Prokaryotic N-terminal methylation motif BI315_04315 PF05567 Neisseria PilC beta-propeller domain BI315_04340 PF06580 Histidine kinase BI315_04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_04340 PF07694 5TMR of 5TMR-LYT BI315_04345 PF03641 Possible lysine decarboxylase BI315_04345 PF11892 Domain of unknown function (DUF3412) BI315_04345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BI315_04350 PF00593 TonB dependent receptor BI315_04360 PF01914 MarC family integral membrane protein BI315_04370 PF00462 Glutaredoxin BI315_04375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI315_04375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI315_04380 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BI315_04380 PF02222 ATP-grasp domain BI315_04385 PF00731 AIR carboxylase BI315_04395 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BI315_04395 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BI315_04405 PF03725 3' exoribonuclease family, domain 2 BI315_04405 PF00013 KH domain BI315_04405 PF00575 S1 RNA binding domain BI315_04405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BI315_04405 PF01138 3' exoribonuclease family, domain 1 BI315_04410 PF00312 Ribosomal protein S15 BI315_04415 PF16198 tRNA pseudouridylate synthase B C-terminal domain BI315_04415 PF09157 Pseudouridine synthase II TruB, C-terminal BI315_04415 PF01509 TruB family pseudouridylate synthase (N terminal domain) BI315_04420 PF02033 Ribosome-binding factor A BI315_04425 PF04760 Translation initiation factor IF-2, N-terminal region BI315_04425 PF08364 Bacterial translation initiation factor IF-2 associated region BI315_04425 PF11987 Translation-initiation factor 2 BI315_04425 PF00009 Elongation factor Tu GTP binding domain BI315_04430 PF00575 S1 RNA binding domain BI315_04430 PF13184 NusA-like KH domain BI315_04430 PF08529 NusA N-terminal domain BI315_04435 PF17384 RimP C-terminal SH3 domain BI315_04435 PF02576 RimP N-terminal domain BI315_04445 PF00361 Proton-conducting membrane transporter BI315_04450 PF00361 Proton-conducting membrane transporter BI315_04450 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BI315_04455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI315_04455 PF00361 Proton-conducting membrane transporter BI315_04460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI315_04465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BI315_04470 PF12838 4Fe-4S dicluster domain BI315_04475 PF00146 NADH dehydrogenase BI315_04480 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BI315_04480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BI315_04480 PF00384 Molybdopterin oxidoreductase BI315_04485 PF10531 SLBB domain BI315_04485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BI315_04485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BI315_04495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BI315_04500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BI315_04505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BI315_04510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BI315_04525 PF00121 Triosephosphate isomerase BI315_04530 PF00106 short chain dehydrogenase BI315_04545 PF03707 Bacterial signalling protein N terminal repeat BI315_04545 PF00990 Diguanylate cyclase, GGDEF domain BI315_04545 PF00563 EAL domain BI315_04560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI315_04560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI315_04560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI315_04560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI315_04565 PF01039 Carboxyl transferase domain BI315_04565 PF17848 Acetyl-coA carboxylase zinc finger domain BI315_04570 PF00290 Tryptophan synthase alpha chain BI315_04580 PF00291 Pyridoxal-phosphate dependent enzyme BI315_04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_04585 PF03466 LysR substrate binding domain BI315_04590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BI315_04595 PF01416 tRNA pseudouridine synthase BI315_04615 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI315_04615 PF02774 Semialdehyde dehydrogenase, dimerisation domain BI315_04620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI315_04620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI315_04625 PF01264 Chorismate synthase BI315_04630 PF05175 Methyltransferase small domain BI315_04635 PF02630 SCO1/SenC BI315_04640 PF02666 Phosphatidylserine decarboxylase BI315_04655 PF05872 Bacterial protein of unknown function (DUF853) BI315_04660 PF00293 NUDIX domain BI315_04680 PF03449 Transcription elongation factor, N-terminal BI315_04680 PF01272 Transcription elongation factor, GreA/GreB, C-term BI315_04685 PF18693 TRAM domain BI315_04685 PF04055 Radical SAM superfamily BI315_04685 PF00919 Uncharacterized protein family UPF0004 BI315_04690 PF01738 Dienelactone hydrolase family BI315_04710 PF00692 dUTPase BI315_04720 PF10609 NUBPL iron-transfer P-loop NTPase BI315_04725 PF07715 TonB-dependent Receptor Plug Domain BI315_04725 PF00593 TonB dependent receptor BI315_04740 PF01431 Peptidase family M13 BI315_04740 PF05649 Peptidase family M13 BI315_04750 PF01431 Peptidase family M13 BI315_04750 PF05649 Peptidase family M13 BI315_04765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI315_04770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_04770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI315_04775 PF01266 FAD dependent oxidoreductase BI315_04780 PF04235 Protein of unknown function (DUF418) BI315_04785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI315_04790 PF00877 NlpC/P60 family BI315_04795 PF00877 NlpC/P60 family BI315_04810 PF00375 Sodium:dicarboxylate symporter family BI315_04815 PF00245 Alkaline phosphatase BI315_04825 PF09179 TilS substrate binding domain BI315_04825 PF01171 PP-loop family BI315_04825 PF11734 TilS substrate C-terminal domain BI315_04830 PF02609 Exonuclease VII small subunit BI315_04835 PF00348 Polyprenyl synthetase BI315_04840 PF14521 Lysine-specific metallo-endopeptidase BI315_04850 PF01523 Putative modulator of DNA gyrase BI315_04855 PF04751 Protein of unknown function (DUF615) BI315_04860 PF01523 Putative modulator of DNA gyrase BI315_04870 PF13502 AsmA-like C-terminal region BI315_04870 PF13116 Protein of unknown function BI315_04875 PF10150 Ribonuclease E/G family BI315_04875 PF00575 S1 RNA binding domain BI315_04880 PF02545 Maf-like protein BI315_04885 PF04402 Protein of unknown function (DUF541) BI315_04900 PF02590 Predicted SPOUT methyltransferase BI315_04915 PF01467 Cytidylyltransferase-like BI315_04930 PF08264 Anticodon-binding domain of tRNA BI315_04930 PF00133 tRNA synthetases class I (I, L, M and V) BI315_04930 PF13603 Leucyl-tRNA synthetase, Domain 2 BI315_04940 PF00085 Thioredoxin BI315_04970 PF04070 Domain of unknown function (DUF378) BI315_04975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI315_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_04985 PF03466 LysR substrate binding domain BI315_05015 PF00664 ABC transporter transmembrane region BI315_05015 PF00005 ABC transporter BI315_05030 PF00873 AcrB/AcrD/AcrF family BI315_05045 PF02321 Outer membrane efflux protein BI315_05050 PF00072 Response regulator receiver domain BI315_05050 PF00486 Transcriptional regulatory protein, C terminal BI315_05055 PF00672 HAMP domain BI315_05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_05055 PF00512 His Kinase A (phospho-acceptor) domain BI315_05060 PF00999 Sodium/hydrogen exchanger family BI315_05065 PF00144 Beta-lactamase BI315_05070 PF03737 Aldolase/RraA BI315_05090 PF00990 Diguanylate cyclase, GGDEF domain BI315_05090 PF00072 Response regulator receiver domain BI315_05095 PF01479 S4 domain BI315_05095 PF00849 RNA pseudouridylate synthase BI315_05100 PF00563 EAL domain BI315_05100 PF08448 PAS fold BI315_05100 PF00990 Diguanylate cyclase, GGDEF domain BI315_05105 PF03880 DbpA RNA binding domain BI315_05105 PF00271 Helicase conserved C-terminal domain BI315_05105 PF00270 DEAD/DEAH box helicase BI315_05160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI315_05160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BI315_05170 PF00654 Voltage gated chloride channel BI315_05175 PF08240 Alcohol dehydrogenase GroES-like domain BI315_05175 PF00107 Zinc-binding dehydrogenase BI315_05195 PF00593 TonB dependent receptor BI315_05195 PF07715 TonB-dependent Receptor Plug Domain BI315_05205 PF00082 Subtilase family BI315_05205 PF01483 Proprotein convertase P-domain BI315_05215 PF00082 Subtilase family BI315_05215 PF01483 Proprotein convertase P-domain BI315_05225 PF00248 Aldo/keto reductase family BI315_05235 PF07690 Major Facilitator Superfamily BI315_05240 PF03466 LysR substrate binding domain BI315_05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_05250 PF06719 AraC-type transcriptional regulator N-terminus BI315_05250 PF12833 Helix-turn-helix domain BI315_05260 PF16859 Tetracyclin repressor-like, C-terminal domain BI315_05260 PF00440 Bacterial regulatory proteins, tetR family BI315_05265 PF02321 Outer membrane efflux protein BI315_05270 PF00873 AcrB/AcrD/AcrF family BI315_05275 PF00529 HlyD membrane-fusion protein of T1SS BI315_05275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_05285 PF01475 Ferric uptake regulator family BI315_05290 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI315_05315 PF06123 Inner membrane protein CreD BI315_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_05325 PF00512 His Kinase A (phospho-acceptor) domain BI315_05325 PF00672 HAMP domain BI315_05330 PF00486 Transcriptional regulatory protein, C terminal BI315_05330 PF00072 Response regulator receiver domain BI315_05335 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BI315_05345 PF17757 UvrB interaction domain BI315_05345 PF02559 CarD-like/TRCF domain BI315_05345 PF00270 DEAD/DEAH box helicase BI315_05345 PF00271 Helicase conserved C-terminal domain BI315_05345 PF03461 TRCF domain BI315_05380 PF01627 Hpt domain BI315_05380 PF09078 CheY binding BI315_05380 PF02895 Signal transducing histidine kinase, homodimeric domain BI315_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_05380 PF01584 CheW-like domain BI315_05390 PF00672 HAMP domain BI315_05390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_05390 PF02203 Tar ligand binding domain homologue BI315_05395 PF01584 CheW-like domain BI315_05400 PF00563 EAL domain BI315_05400 PF13426 PAS domain BI315_05400 PF00990 Diguanylate cyclase, GGDEF domain BI315_05405 PF01739 CheR methyltransferase, SAM binding domain BI315_05405 PF03705 CheR methyltransferase, all-alpha domain BI315_05410 PF00072 Response regulator receiver domain BI315_05410 PF01339 CheB methylesterase BI315_05415 PF13091 PLD-like domain BI315_05420 PF05649 Peptidase family M13 BI315_05420 PF01431 Peptidase family M13 BI315_05430 PF00300 Histidine phosphatase superfamily (branch 1) BI315_05435 PF04493 Endonuclease V BI315_05445 PF02678 Pirin BI315_05445 PF05726 Pirin C-terminal cupin domain BI315_05460 PF02678 Pirin BI315_05460 PF05726 Pirin C-terminal cupin domain BI315_05465 PF13722 5TM C-terminal transporter carbon starvation CstA BI315_05465 PF02554 Carbon starvation protein CstA BI315_05470 PF04328 Selenoprotein, putative BI315_05515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI315_05515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI315_05520 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI315_05520 PF00941 FAD binding domain in molybdopterin dehydrogenase BI315_05525 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI315_05525 PF00111 2Fe-2S iron-sulfur cluster binding domain BI315_05525 PF01799 [2Fe-2S] binding domain BI315_05530 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_05530 PF08240 Alcohol dehydrogenase GroES-like domain BI315_05530 PF08990 Erythronolide synthase docking BI315_05530 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_05530 PF08659 KR domain BI315_05530 PF16197 Ketoacyl-synthetase C-terminal extension BI315_05530 PF00550 Phosphopantetheine attachment site BI315_05530 PF09277 Erythronolide synthase, docking BI315_05530 PF14765 Polyketide synthase dehydratase BI315_05530 PF00698 Acyl transferase domain BI315_05535 PF01590 GAF domain BI315_05535 PF00563 EAL domain BI315_05535 PF00990 Diguanylate cyclase, GGDEF domain BI315_05535 PF00360 Phytochrome region BI315_05540 PF00436 Single-strand binding protein family BI315_05545 PF00348 Polyprenyl synthetase BI315_05560 PF02875 Mur ligase family, glutamate ligase domain BI315_05560 PF08245 Mur ligase middle domain BI315_05575 PF00696 Amino acid kinase family BI315_05575 PF01842 ACT domain BI315_05580 PF02567 Phenazine biosynthesis-like protein BI315_05585 PF02567 Phenazine biosynthesis-like protein BI315_05595 PF02566 OsmC-like protein BI315_05600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI315_05600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI315_05605 PF03652 Holliday junction resolvase BI315_05610 PF02622 Uncharacterized ACR, COG1678 BI315_05620 PF00958 GMP synthase C terminal domain BI315_05620 PF00117 Glutamine amidotransferase class-I BI315_05620 PF03352 Methyladenine glycosylase BI315_05620 PF13302 Acetyltransferase (GNAT) domain BI315_05620 PF13673 Acetyltransferase (GNAT) domain BI315_05630 PF03211 Pectate lyase BI315_05635 PF00437 Type II/IV secretion system protein BI315_05640 PF00437 Type II/IV secretion system protein BI315_05645 PF01168 Alanine racemase, N-terminal domain BI315_05650 PF03807 NADP oxidoreductase coenzyme F420-dependent BI315_05650 PF14748 Pyrroline-5-carboxylate reductase dimerisation BI315_05660 PF01551 Peptidase family M23 BI315_05680 PF01965 DJ-1/PfpI family BI315_05690 PF02082 Transcriptional regulator BI315_05695 PF01458 Uncharacterized protein family (UPF0051) BI315_05700 PF00005 ABC transporter BI315_05705 PF01458 Uncharacterized protein family (UPF0051) BI315_05710 PF00266 Aminotransferase class-V BI315_05720 PF00355 Rieske [2Fe-2S] domain BI315_05725 PF00593 TonB dependent receptor BI315_05725 PF07715 TonB-dependent Receptor Plug Domain BI315_05730 PF13640 2OG-Fe(II) oxygenase superfamily BI315_05730 PF18331 PKHD-type hydroxylase C-terminal domain BI315_05755 PF02424 ApbE family BI315_05760 PF00258 Flavodoxin BI315_05760 PF00667 FAD binding domain BI315_05760 PF00175 Oxidoreductase NAD-binding domain BI315_05780 PF07687 Peptidase dimerisation domain BI315_05780 PF01546 Peptidase family M20/M25/M40 BI315_05790 PF01636 Phosphotransferase enzyme family BI315_05795 PF00483 Nucleotidyl transferase BI315_05800 PF00308 Bacterial dnaA protein BI315_05805 PF01594 AI-2E family transporter BI315_05815 PF02769 AIR synthase related protein, C-terminal domain BI315_05815 PF00586 AIR synthase related protein, N-terminal domain BI315_05825 PF00551 Formyl transferase BI315_05845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI315_05850 PF01722 BolA-like protein BI315_05855 PF00571 CBS domain BI315_05855 PF01380 SIS domain BI315_05870 PF03968 OstA-like protein BI315_05875 PF00005 ABC transporter BI315_05880 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI315_05880 PF04963 Sigma-54 factor, core binding domain BI315_05880 PF04552 Sigma-54, DNA binding domain BI315_05885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BI315_05890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI315_05895 PF07475 HPr Serine kinase C-terminal domain BI315_05895 PF02603 HPr Serine kinase N terminus BI315_05900 PF03668 P-loop ATPase protein family BI315_05910 PF00381 PTS HPr component phosphorylation site BI315_05915 PF00391 PEP-utilising enzyme, mobile domain BI315_05915 PF05524 PEP-utilising enzyme, N-terminal BI315_05915 PF02896 PEP-utilising enzyme, TIM barrel domain BI315_05920 PF03448 MgtE intracellular N domain BI315_05920 PF01769 Divalent cation transporter BI315_05920 PF00571 CBS domain BI315_05925 PF00756 Putative esterase BI315_05935 PF02322 Cytochrome bd terminal oxidase subunit II BI315_05940 PF01654 Cytochrome bd terminal oxidase subunit I BI315_05950 PF00324 Amino acid permease BI315_05960 PF00544 Pectate lyase BI315_05970 PF00561 alpha/beta hydrolase fold BI315_05980 PF00196 Bacterial regulatory proteins, luxR family BI315_05985 PF00324 Amino acid permease BI315_06020 PF12706 Beta-lactamase superfamily domain BI315_06025 PF04820 Tryptophan halogenase BI315_06060 PF09278 MerR, DNA binding BI315_06060 PF00376 MerR family regulatory protein BI315_06065 PF07690 Major Facilitator Superfamily BI315_06075 PF03738 Glutathionylspermidine synthase preATP-grasp BI315_06100 PF04012 PspA/IM30 family BI315_06110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BI315_06110 PF01243 Pyridoxamine 5'-phosphate oxidase BI315_06115 PF01202 Shikimate kinase BI315_06120 PF01761 3-dehydroquinate synthase BI315_06130 PF01208 Uroporphyrinogen decarboxylase (URO-D) BI315_06200 PF01590 GAF domain BI315_06200 PF02954 Bacterial regulatory protein, Fis family BI315_06200 PF00158 Sigma-54 interaction domain BI315_06205 PF07690 Major Facilitator Superfamily BI315_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_06210 PF00672 HAMP domain BI315_06210 PF17149 Periplasmic sensor domain found in signal transduction proteins BI315_06210 PF01627 Hpt domain BI315_06210 PF00072 Response regulator receiver domain BI315_06210 PF00512 His Kinase A (phospho-acceptor) domain BI315_06215 PF17149 Periplasmic sensor domain found in signal transduction proteins BI315_06215 PF00672 HAMP domain BI315_06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_06215 PF00512 His Kinase A (phospho-acceptor) domain BI315_06215 PF00072 Response regulator receiver domain BI315_06215 PF01627 Hpt domain BI315_06225 PF00072 Response regulator receiver domain BI315_06225 PF01627 Hpt domain BI315_06225 PF00512 His Kinase A (phospho-acceptor) domain BI315_06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_06230 PF00072 Response regulator receiver domain BI315_06230 PF01627 Hpt domain BI315_06230 PF00512 His Kinase A (phospho-acceptor) domain BI315_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_06235 PF04264 YceI-like domain BI315_06255 PF03313 Serine dehydratase alpha chain BI315_06255 PF03315 Serine dehydratase beta chain BI315_06260 PF12697 Alpha/beta hydrolase family BI315_06270 PF00742 Homoserine dehydrogenase BI315_06270 PF00696 Amino acid kinase family BI315_06270 PF03447 Homoserine dehydrogenase, NAD binding domain BI315_06275 PF01053 Cys/Met metabolism PLP-dependent enzyme BI315_06280 PF00561 alpha/beta hydrolase fold BI315_06285 PF01551 Peptidase family M23 BI315_06285 PF01476 LysM domain BI315_06285 PF08525 Opacity-associated protein A N-terminal motif BI315_06290 PF00009 Elongation factor Tu GTP binding domain BI315_06290 PF16658 Class II release factor RF3, C-terminal domain BI315_06295 PF03006 Haemolysin-III related BI315_06300 PF05170 AsmA family BI315_06305 PF00478 IMP dehydrogenase / GMP reductase domain BI315_06305 PF00571 CBS domain BI315_06310 PF00535 Glycosyl transferase family 2 BI315_06315 PF00912 Transglycosylase BI315_06320 PF01430 Hsp33 protein BI315_06330 PF07715 TonB-dependent Receptor Plug Domain BI315_06330 PF00593 TonB dependent receptor BI315_06340 PF00440 Bacterial regulatory proteins, tetR family BI315_06345 PF00561 alpha/beta hydrolase fold BI315_06350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_06350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_06350 PF09317 Domain of unknown function (DUF1974) BI315_06375 PF01597 Glycine cleavage H-protein BI315_06380 PF08669 Glycine cleavage T-protein C-terminal barrel domain BI315_06380 PF01571 Aminomethyltransferase folate-binding domain BI315_06390 PF01145 SPFH domain / Band 7 family BI315_06390 PF16200 C-terminal region of band_7 BI315_06395 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BI315_06400 PF03819 MazG nucleotide pyrophosphohydrolase domain BI315_06405 PF00459 Inositol monophosphatase family BI315_06410 PF00293 NUDIX domain BI315_06415 PF00202 Aminotransferase class-III BI315_06420 PF04452 RNA methyltransferase BI315_06425 PF02685 Glucokinase BI315_06440 PF01476 LysM domain BI315_06440 PF00704 Glycosyl hydrolases family 18 BI315_06455 PF14310 Fibronectin type III-like domain BI315_06455 PF07691 PA14 domain BI315_06455 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_06455 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI315_06465 PF01301 Glycosyl hydrolases family 35 BI315_06470 PF13520 Amino acid permease BI315_06480 PF11975 Family 4 glycosyl hydrolase C-terminal domain BI315_06480 PF02056 Family 4 glycosyl hydrolase BI315_06490 PF07971 Glycosyl hydrolase family 92 BI315_06490 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI315_06495 PF01301 Glycosyl hydrolases family 35 BI315_06530 PF03932 CutC family BI315_06535 PF01112 Asparaginase BI315_06555 PF13302 Acetyltransferase (GNAT) domain BI315_06570 PF01584 CheW-like domain BI315_06570 PF00072 Response regulator receiver domain BI315_06570 PF01627 Hpt domain BI315_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_06575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_06575 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BI315_06585 PF00072 Response regulator receiver domain BI315_06590 PF00072 Response regulator receiver domain BI315_06595 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BI315_06595 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BI315_06605 PF03747 ADP-ribosylglycohydrolase BI315_06610 PF00814 Glycoprotease family BI315_06615 PF13307 Helicase C-terminal domain BI315_06615 PF04851 Type III restriction enzyme, res subunit BI315_06625 PF14814 Bifunctional transglycosylase second domain BI315_06625 PF00912 Transglycosylase BI315_06625 PF00905 Penicillin binding protein transpeptidase domain BI315_06630 PF00535 Glycosyl transferase family 2 BI315_06650 PF04607 Region found in RelA / SpoT proteins BI315_06650 PF02824 TGS domain BI315_06650 PF13291 ACT domain BI315_06655 PF08042 PqqA family BI315_06660 PF12706 Beta-lactamase superfamily domain BI315_06665 PF03070 TENA/THI-4/PQQC family BI315_06670 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BI315_06675 PF04055 Radical SAM superfamily BI315_06675 PF13186 Iron-sulfur cluster-binding domain BI315_06690 PF02685 Glucokinase BI315_06705 PF00270 DEAD/DEAH box helicase BI315_06705 PF11898 Domain of unknown function (DUF3418) BI315_06705 PF04408 Helicase associated domain (HA2) BI315_06705 PF00271 Helicase conserved C-terminal domain BI315_06705 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BI315_06710 PF00210 Ferritin-like domain BI315_06720 PF16124 RecQ zinc-binding BI315_06720 PF09382 RQC domain BI315_06720 PF00270 DEAD/DEAH box helicase BI315_06720 PF00570 HRDC domain BI315_06720 PF00271 Helicase conserved C-terminal domain BI315_06755 PF00672 HAMP domain BI315_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_06755 PF02203 Tar ligand binding domain homologue BI315_06775 PF13426 PAS domain BI315_06775 PF07536 HWE histidine kinase BI315_06775 PF13581 Histidine kinase-like ATPase domain BI315_06780 PF06508 Queuosine biosynthesis protein QueC BI315_06790 PF04055 Radical SAM superfamily BI315_06800 PF00691 OmpA family BI315_06805 PF07676 WD40-like Beta Propeller Repeat BI315_06805 PF04052 TolB amino-terminal domain BI315_06815 PF02472 Biopolymer transport protein ExbD/TolR BI315_06820 PF01618 MotA/TolQ/ExbB proton channel family BI315_06825 PF03061 Thioesterase superfamily BI315_06830 PF17864 RuvB AAA lid domain BI315_06830 PF05496 Holliday junction DNA helicase RuvB P-loop domain BI315_06830 PF05491 RuvB C-terminal winged helix domain BI315_06840 PF02705 K+ potassium transporter BI315_06845 PF01330 RuvA N terminal domain BI315_06845 PF07499 RuvA, C-terminal domain BI315_06850 PF02075 Crossover junction endodeoxyribonuclease RuvC BI315_06855 PF01709 Transcriptional regulator BI315_06870 PF01336 OB-fold nucleic acid binding domain BI315_06870 PF02938 GAD domain BI315_06870 PF00152 tRNA synthetases class II (D, K and N) BI315_06885 PF07690 Major Facilitator Superfamily BI315_06895 PF04185 Phosphoesterase family BI315_06895 PF05506 Domain of unknown function (DUF756) BI315_06900 PF04185 Phosphoesterase family BI315_06900 PF05506 Domain of unknown function (DUF756) BI315_06920 PF03466 LysR substrate binding domain BI315_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_06930 PF00005 ABC transporter BI315_06930 PF12848 ABC transporter BI315_06935 PF07715 TonB-dependent Receptor Plug Domain BI315_06935 PF00593 TonB dependent receptor BI315_06950 PF07715 TonB-dependent Receptor Plug Domain BI315_06950 PF00593 TonB dependent receptor BI315_06955 PF07715 TonB-dependent Receptor Plug Domain BI315_06955 PF00593 TonB dependent receptor BI315_06960 PF00067 Cytochrome P450 BI315_06970 PF00999 Sodium/hydrogen exchanger family BI315_06970 PF02254 TrkA-N domain BI315_06995 PF07715 TonB-dependent Receptor Plug Domain BI315_06995 PF07660 Secretin and TonB N terminus short domain BI315_06995 PF00593 TonB dependent receptor BI315_07005 PF04183 IucA / IucC family BI315_07005 PF06276 Ferric iron reductase FhuF-like transporter BI315_07010 PF07690 Major Facilitator Superfamily BI315_07020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BI315_07020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI315_07035 PF02654 Cobalamin-5-phosphate synthase BI315_07045 PF02277 Phosphoribosyltransferase BI315_07050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BI315_07055 PF07685 CobB/CobQ-like glutamine amidotransferase domain BI315_07055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI315_07060 PF00155 Aminotransferase class I and II BI315_07065 PF17113 Regulatory signalling modulator protein AmpE BI315_07065 PF03186 CobD/Cbib protein BI315_07070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BI315_07070 PF12557 Cob(I)alamin adenosyltransferase N terminal BI315_07085 PF07715 TonB-dependent Receptor Plug Domain BI315_07085 PF00593 TonB dependent receptor BI315_07090 PF17871 AAA lid domain BI315_07090 PF07724 AAA domain (Cdc48 subfamily) BI315_07090 PF00004 ATPase family associated with various cellular activities (AAA) BI315_07090 PF10431 C-terminal, D2-small domain, of ClpB protein BI315_07090 PF02861 Clp amino terminal domain, pathogenicity island component BI315_07095 PF00005 ABC transporter BI315_07100 PF00528 Binding-protein-dependent transport system inner membrane component BI315_07105 PF09084 NMT1/THI5 like BI315_07110 PF00248 Aldo/keto reductase family BI315_07120 PF07715 TonB-dependent Receptor Plug Domain BI315_07120 PF00593 TonB dependent receptor BI315_07125 PF01541 GIY-YIG catalytic domain BI315_07160 PF07715 TonB-dependent Receptor Plug Domain BI315_07160 PF00593 TonB dependent receptor BI315_07165 PF02358 Trehalose-phosphatase BI315_07170 PF00723 Glycosyl hydrolases family 15 BI315_07175 PF00982 Glycosyltransferase family 20 BI315_07180 PF01011 PQQ enzyme repeat BI315_07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_07190 PF00672 HAMP domain BI315_07190 PF02203 Tar ligand binding domain homologue BI315_07195 PF04134 Protein of unknown function, DUF393 BI315_07210 PF00849 RNA pseudouridylate synthase BI315_07215 PF13525 Outer membrane lipoprotein BI315_07225 PF00795 Carbon-nitrogen hydrolase BI315_07225 PF02540 NAD synthase BI315_07255 PF13406 Transglycosylase SLT domain BI315_07260 PF01526 Tn3 transposase DDE domain BI315_07260 PF13700 Domain of unknown function (DUF4158) BI315_07285 PF01129 NAD:arginine ADP-ribosyltransferase BI315_07310 PF00549 CoA-ligase BI315_07310 PF02629 CoA binding domain BI315_07315 PF08442 ATP-grasp domain BI315_07315 PF00549 CoA-ligase BI315_07320 PF00512 His Kinase A (phospho-acceptor) domain BI315_07320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07325 PF00072 Response regulator receiver domain BI315_07325 PF02954 Bacterial regulatory protein, Fis family BI315_07325 PF00158 Sigma-54 interaction domain BI315_07330 PF00437 Type II/IV secretion system protein BI315_07330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI315_07335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI315_07335 PF00437 Type II/IV secretion system protein BI315_07345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI315_07345 PF00437 Type II/IV secretion system protein BI315_07350 PF00114 Pilin (bacterial filament) BI315_07350 PF07963 Prokaryotic N-terminal methylation motif BI315_07355 PF00114 Pilin (bacterial filament) BI315_07355 PF07963 Prokaryotic N-terminal methylation motif BI315_07365 PF01478 Type IV leader peptidase family BI315_07365 PF06750 Bacterial Peptidase A24 N-terminal domain BI315_07370 PF01121 Dephospho-CoA kinase BI315_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07400 PF16736 Single Cache-like BI315_07400 PF00989 PAS fold BI315_07400 PF00512 His Kinase A (phospho-acceptor) domain BI315_07405 PF00072 Response regulator receiver domain BI315_07405 PF00486 Transcriptional regulatory protein, C terminal BI315_07420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI315_07420 PF00128 Alpha amylase, catalytic domain BI315_07490 PF04002 RadC-like JAB domain BI315_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07515 PF00072 Response regulator receiver domain BI315_07515 PF13426 PAS domain BI315_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07520 PF13426 PAS domain BI315_07520 PF00072 Response regulator receiver domain BI315_07570 PF01527 Transposase BI315_07615 PF00072 Response regulator receiver domain BI315_07615 PF08448 PAS fold BI315_07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07615 PF13188 PAS domain BI315_07615 PF00512 His Kinase A (phospho-acceptor) domain BI315_07645 PF13676 TIR domain BI315_07665 PF00657 GDSL-like Lipase/Acylhydrolase BI315_07665 PF03797 Autotransporter beta-domain BI315_07675 PF05690 Thiazole biosynthesis protein ThiG BI315_07685 PF02390 Putative methyltransferase BI315_07690 PF02080 TrkA-C domain BI315_07690 PF03600 Citrate transporter BI315_07710 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI315_07715 PF01741 Large-conductance mechanosensitive channel, MscL BI315_07725 PF00356 Bacterial regulatory proteins, lacI family BI315_07735 PF00703 Glycosyl hydrolases family 2 BI315_07735 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI315_07735 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BI315_07740 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI315_07740 PF10566 Glycoside hydrolase 97 BI315_07740 PF14508 Glycosyl-hydrolase 97 N-terminal BI315_07750 PF00135 Carboxylesterase family BI315_07755 PF00588 SpoU rRNA Methylase family BI315_07755 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI315_07765 PF11838 ERAP1-like C-terminal domain BI315_07765 PF01433 Peptidase family M1 domain BI315_07805 PF00873 AcrB/AcrD/AcrF family BI315_07810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_07810 PF00529 HlyD membrane-fusion protein of T1SS BI315_07815 PF00009 Elongation factor Tu GTP binding domain BI315_07820 PF01507 Phosphoadenosine phosphosulfate reductase family BI315_07825 PF00175 Oxidoreductase NAD-binding domain BI315_07825 PF00258 Flavodoxin BI315_07825 PF00667 FAD binding domain BI315_07830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI315_07830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI315_07835 PF01507 Phosphoadenosine phosphosulfate reductase family BI315_07855 PF00512 His Kinase A (phospho-acceptor) domain BI315_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_07855 PF01627 Hpt domain BI315_07855 PF00072 Response regulator receiver domain BI315_07870 PF03466 LysR substrate binding domain BI315_07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_07875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI315_07875 PF10414 Sirohaem synthase dimerisation region BI315_07875 PF14824 Sirohaem biosynthesis protein central BI315_07880 PF00291 Pyridoxal-phosphate dependent enzyme BI315_07890 PF01661 Macro domain BI315_07895 PF00274 Fructose-bisphosphate aldolase class-I BI315_07910 PF00224 Pyruvate kinase, barrel domain BI315_07910 PF02887 Pyruvate kinase, alpha/beta domain BI315_07920 PF00162 Phosphoglycerate kinase BI315_07945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BI315_07945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BI315_07955 PF03922 OmpW family BI315_07960 PF03922 OmpW family BI315_07970 PF00753 Metallo-beta-lactamase superfamily BI315_07970 PF04273 Putative phosphatase (DUF442) BI315_07980 PF00528 Binding-protein-dependent transport system inner membrane component BI315_07985 PF03459 TOBE domain BI315_07985 PF00005 ABC transporter BI315_08020 PF01476 LysM domain BI315_08020 PF03734 L,D-transpeptidase catalytic domain BI315_08025 PF01551 Peptidase family M23 BI315_08025 PF04225 Opacity-associated protein A LysM-like domain BI315_08035 PF00593 TonB dependent receptor BI315_08035 PF07715 TonB-dependent Receptor Plug Domain BI315_08040 PF12146 Serine aminopeptidase, S33 BI315_08045 PF02779 Transketolase, pyrimidine binding domain BI315_08045 PF02780 Transketolase, C-terminal domain BI315_08045 PF00456 Transketolase, thiamine diphosphate binding domain BI315_08050 PF00375 Sodium:dicarboxylate symporter family BI315_08065 PF07584 Aerotolerance regulator N-terminal BI315_08065 PF00092 von Willebrand factor type A domain BI315_08085 PF07726 ATPase family associated with various cellular activities (AAA) BI315_08085 PF17863 AAA lid domain BI315_08095 PF11741 AMIN domain BI315_08095 PF00263 Bacterial type II and III secretion system protein BI315_08095 PF03958 Bacterial type II/III secretion system short domain BI315_08095 PF07660 Secretin and TonB N terminus short domain BI315_08120 PF17092 Penicillin-binding protein OB-like domain BI315_08120 PF00905 Penicillin binding protein transpeptidase domain BI315_08120 PF00912 Transglycosylase BI315_08130 PF00285 Citrate synthase, C-terminal domain BI315_08135 PF01197 Ribosomal protein L31 BI315_08140 PF01156 Inosine-uridine preferring nucleoside hydrolase BI315_08145 PF00271 Helicase conserved C-terminal domain BI315_08145 PF00270 DEAD/DEAH box helicase BI315_08145 PF17191 RecG wedge domain BI315_08150 PF01042 Endoribonuclease L-PSP BI315_08155 PF02824 TGS domain BI315_08155 PF13291 ACT domain BI315_08155 PF04607 Region found in RelA / SpoT proteins BI315_08160 PF01192 RNA polymerase Rpb6 BI315_08165 PF00625 Guanylate kinase BI315_08170 PF08340 Domain of unknown function (DUF1732) BI315_08170 PF03755 YicC-like family, N-terminal region BI315_08175 PF01138 3' exoribonuclease family, domain 1 BI315_08175 PF03725 3' exoribonuclease family, domain 2 BI315_08185 PF01725 Ham1 family BI315_08190 PF04055 Radical SAM superfamily BI315_08190 PF06969 HemN C-terminal domain BI315_08205 PF00557 Metallopeptidase family M24 BI315_08215 PF05195 Aminopeptidase P, N-terminal domain BI315_08215 PF00557 Metallopeptidase family M24 BI315_08220 PF03695 Uncharacterised protein family (UPF0149) BI315_08230 PF05164 Cell division protein ZapA BI315_08240 PF01812 5-formyltetrahydrofolate cyclo-ligase family BI315_08250 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BI315_08260 PF13369 Transglutaminase-like superfamily BI315_08265 PF00301 Rubredoxin BI315_08270 PF02581 Thiamine monophosphate synthase BI315_08285 PF00202 Aminotransferase class-III BI315_08290 PF00196 Bacterial regulatory proteins, luxR family BI315_08290 PF17874 MalT-like TPR region BI315_08295 PF00127 Copper binding proteins, plastocyanin/azurin family BI315_08300 PF00155 Aminotransferase class I and II BI315_08310 PF00034 Cytochrome c BI315_08310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BI315_08315 PF01593 Flavin containing amine oxidoreductase BI315_08330 PF00202 Aminotransferase class-III BI315_08335 PF00520 Ion transport protein BI315_08335 PF00027 Cyclic nucleotide-binding domain BI315_08355 PF01569 PAP2 superfamily BI315_08360 PF01062 Bestrophin, RFP-TM, chloride channel BI315_08370 PF08245 Mur ligase middle domain BI315_08370 PF02875 Mur ligase family, glutamate ligase domain BI315_08370 PF01225 Mur ligase family, catalytic domain BI315_08380 PF00365 Phosphofructokinase BI315_08390 PF03030 Inorganic H+ pyrophosphatase BI315_08400 PF00719 Inorganic pyrophosphatase BI315_08410 PF07715 TonB-dependent Receptor Plug Domain BI315_08410 PF00593 TonB dependent receptor BI315_08415 PF12833 Helix-turn-helix domain BI315_08420 PF18500 CadC C-terminal domain 1 BI315_08420 PF00486 Transcriptional regulatory protein, C terminal BI315_08425 PF01964 Radical SAM ThiC family BI315_08425 PF13667 ThiC-associated domain BI315_08435 PF00593 TonB dependent receptor BI315_08435 PF07715 TonB-dependent Receptor Plug Domain BI315_08440 PF00672 HAMP domain BI315_08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_08450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BI315_08450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BI315_08455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI315_08455 PF00205 Thiamine pyrophosphate enzyme, central domain BI315_08455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI315_08465 PF00291 Pyridoxal-phosphate dependent enzyme BI315_08470 PF08502 LeuA allosteric (dimerisation) domain BI315_08470 PF00682 HMGL-like BI315_08475 PF00180 Isocitrate/isopropylmalate dehydrogenase BI315_08480 PF00694 Aconitase C-terminal domain BI315_08485 PF00330 Aconitase family (aconitate hydratase) BI315_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_08495 PF17151 Periplasmic sensor domain BI315_08495 PF00990 Diguanylate cyclase, GGDEF domain BI315_08510 PF02321 Outer membrane efflux protein BI315_08515 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BI315_08525 PF03279 Bacterial lipid A biosynthesis acyltransferase BI315_08550 PF03949 Malic enzyme, NAD binding domain BI315_08550 PF00390 Malic enzyme, N-terminal domain BI315_08550 PF01515 Phosphate acetyl/butaryl transferase BI315_08555 PF00375 Sodium:dicarboxylate symporter family BI315_08565 PF02743 Cache domain BI315_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_08565 PF00512 His Kinase A (phospho-acceptor) domain BI315_08570 PF07690 Major Facilitator Superfamily BI315_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_08580 PF03466 LysR substrate binding domain BI315_08590 PF00248 Aldo/keto reductase family BI315_08605 PF00196 Bacterial regulatory proteins, luxR family BI315_08605 PF00072 Response regulator receiver domain BI315_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_08620 PF00512 His Kinase A (phospho-acceptor) domain BI315_08620 PF08521 Two-component sensor kinase N-terminal BI315_08625 PF00072 Response regulator receiver domain BI315_08625 PF00486 Transcriptional regulatory protein, C terminal BI315_08640 PF03600 Citrate transporter BI315_08645 PF00106 short chain dehydrogenase BI315_08650 PF00356 Bacterial regulatory proteins, lacI family BI315_08665 PF00128 Alpha amylase, catalytic domain BI315_08680 PF03193 RsgA GTPase BI315_08710 PF07715 TonB-dependent Receptor Plug Domain BI315_08710 PF00593 TonB dependent receptor BI315_08715 PF01522 Polysaccharide deacetylase BI315_08720 PF00462 Glutaredoxin BI315_08735 PF01527 Transposase BI315_08765 PF02645 Uncharacterised protein, DegV family COG1307 BI315_08770 PF01327 Polypeptide deformylase BI315_08780 PF03960 ArsC family BI315_08800 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BI315_08805 PF01270 Glycosyl hydrolases family 8 BI315_08810 PF03170 Bacterial cellulose synthase subunit BI315_08815 PF00535 Glycosyl transferase family 2 BI315_08815 PF03552 Cellulose synthase BI315_08815 PF07238 PilZ domain BI315_08830 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BI315_08830 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BI315_08875 PF07715 TonB-dependent Receptor Plug Domain BI315_08875 PF00593 TonB dependent receptor BI315_08885 PF07702 UTRA domain BI315_08885 PF00392 Bacterial regulatory proteins, gntR family BI315_08895 PF00263 Bacterial type II and III secretion system protein BI315_08895 PF03958 Bacterial type II/III secretion system short domain BI315_08905 PF10741 Type II secretion system (T2SS), protein M subtype b BI315_08910 PF05137 Fimbrial assembly protein (PilN) BI315_08915 PF03934 Type II secretion system (T2SS), protein K BI315_08925 PF07963 Prokaryotic N-terminal methylation motif BI315_08930 PF12019 Type II transport protein GspH BI315_08935 PF08334 Type II secretion system (T2SS), protein G BI315_08940 PF00482 Type II secretion system (T2SS), protein F BI315_08950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI315_08950 PF00437 Type II/IV secretion system protein BI315_08955 PF04151 Bacterial pre-peptidase C-terminal domain BI315_08955 PF00082 Subtilase family BI315_08960 PF13018 Extended Signal Peptide of Type V secretion system BI315_08960 PF03895 YadA-like membrane anchor domain BI315_08960 PF05658 Head domain of trimeric autotransporter adhesin BI315_08960 PF05662 Coiled stalk of trimeric autotransporter adhesin BI315_08965 PF04151 Bacterial pre-peptidase C-terminal domain BI315_08965 PF00082 Subtilase family BI315_08970 PF13018 Extended Signal Peptide of Type V secretion system BI315_08970 PF05662 Coiled stalk of trimeric autotransporter adhesin BI315_08970 PF05658 Head domain of trimeric autotransporter adhesin BI315_08970 PF03895 YadA-like membrane anchor domain BI315_08980 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BI315_08980 PF02769 AIR synthase related protein, C-terminal domain BI315_08980 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BI315_08995 PF13098 Thioredoxin-like domain BI315_08995 PF10411 Disulfide bond isomerase protein N-terminus BI315_09005 PF00589 Phage integrase family BI315_09005 PF02899 Phage integrase, N-terminal SAM-like domain BI315_09020 PF03739 Lipopolysaccharide export system permease LptF/LptG BI315_09030 PF00883 Cytosol aminopeptidase family, catalytic domain BI315_09030 PF02789 Cytosol aminopeptidase family, N-terminal domain BI315_09045 PF10458 Valyl tRNA synthetase tRNA binding arm BI315_09045 PF00133 tRNA synthetases class I (I, L, M and V) BI315_09045 PF08264 Anticodon-binding domain of tRNA BI315_09050 PF00593 TonB dependent receptor BI315_09050 PF07715 TonB-dependent Receptor Plug Domain BI315_09055 PF01464 Transglycosylase SLT domain BI315_09055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BI315_09060 PF00544 Pectate lyase BI315_09075 PF01066 CDP-alcohol phosphatidyltransferase BI315_09085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI315_09085 PF03129 Anticodon binding domain BI315_09085 PF04073 Aminoacyl-tRNA editing domain BI315_09090 PF00816 H-NS histone family BI315_09100 PF02405 Permease MlaE BI315_09105 PF00005 ABC transporter BI315_09110 PF03886 ABC-type transport auxiliary lipoprotein component BI315_09110 PF02470 MlaD protein BI315_09130 PF14307 Glycosyltransferase WbsX BI315_09130 PF05045 Rhamnan synthesis protein F BI315_09135 PF01144 Coenzyme A transferase BI315_09140 PF01144 Coenzyme A transferase BI315_09145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI315_09145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI315_09145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI315_09145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI315_09150 PF01050 Mannose-6-phosphate isomerase BI315_09150 PF00483 Nucleotidyl transferase BI315_09160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI315_09160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI315_09160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI315_09165 PF04321 RmlD substrate binding domain BI315_09170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BI315_09175 PF00483 Nucleotidyl transferase BI315_09180 PF16363 GDP-mannose 4,6 dehydratase BI315_09185 PF01012 Electron transfer flavoprotein domain BI315_09190 PF00766 Electron transfer flavoprotein FAD-binding domain BI315_09190 PF01012 Electron transfer flavoprotein domain BI315_09200 PF01040 UbiA prenyltransferase family BI315_09205 PF04030 D-arabinono-1,4-lactone oxidase BI315_09205 PF01565 FAD binding domain BI315_09210 PF00106 short chain dehydrogenase BI315_09220 PF01370 NAD dependent epimerase/dehydratase family BI315_09225 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_09225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI315_09250 PF00535 Glycosyl transferase family 2 BI315_09260 PF14524 Wzt C-terminal domain BI315_09260 PF00005 ABC transporter BI315_09270 PF01053 Cys/Met metabolism PLP-dependent enzyme BI315_09275 PF00291 Pyridoxal-phosphate dependent enzyme BI315_09275 PF00571 CBS domain BI315_09295 PF00437 Type II/IV secretion system protein BI315_09305 PF14497 Glutathione S-transferase, C-terminal domain BI315_09305 PF02798 Glutathione S-transferase, N-terminal domain BI315_09320 PF00271 Helicase conserved C-terminal domain BI315_09320 PF00270 DEAD/DEAH box helicase BI315_09330 PF00593 TonB dependent receptor BI315_09330 PF07715 TonB-dependent Receptor Plug Domain BI315_09340 PF01242 6-pyruvoyl tetrahydropterin synthase BI315_09355 PF13185 GAF domain BI315_09365 PF00756 Putative esterase BI315_09370 PF00593 TonB dependent receptor BI315_09370 PF07715 TonB-dependent Receptor Plug Domain BI315_09375 PF13419 Haloacid dehalogenase-like hydrolase BI315_09380 PF00817 impB/mucB/samB family BI315_09380 PF11799 impB/mucB/samB family C-terminal domain BI315_09385 PF07977 FabA-like domain BI315_09390 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_09390 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_09400 PF01432 Peptidase family M3 BI315_09415 PF07731 Multicopper oxidase BI315_09415 PF00394 Multicopper oxidase BI315_09415 PF07732 Multicopper oxidase BI315_09420 PF05275 Copper resistance protein B precursor (CopB) BI315_09425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI315_09455 PF01380 SIS domain BI315_09460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_09465 PF12704 MacB-like periplasmic core domain BI315_09465 PF00005 ABC transporter BI315_09465 PF02687 FtsX-like permease family BI315_09470 PF02687 FtsX-like permease family BI315_09470 PF00005 ABC transporter BI315_09470 PF12704 MacB-like periplasmic core domain BI315_09475 PF12704 MacB-like periplasmic core domain BI315_09475 PF02687 FtsX-like permease family BI315_09495 PF14602 Hexapeptide repeat of succinyl-transferase BI315_09495 PF12804 MobA-like NTP transferase domain BI315_09495 PF00132 Bacterial transferase hexapeptide (six repeats) BI315_09510 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BI315_09510 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BI315_09515 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI315_09515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI315_09520 PF00231 ATP synthase BI315_09525 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI315_09525 PF00306 ATP synthase alpha/beta chain, C terminal domain BI315_09525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI315_09530 PF00213 ATP synthase delta (OSCP) subunit BI315_09535 PF00430 ATP synthase B/B' CF(0) BI315_09540 PF00137 ATP synthase subunit C BI315_09545 PF00119 ATP synthase A chain BI315_09565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI315_09565 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_09575 PF02817 e3 binding domain BI315_09575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI315_09575 PF00364 Biotin-requiring enzyme BI315_09610 PF03180 NLPA lipoprotein BI315_09615 PF00528 Binding-protein-dependent transport system inner membrane component BI315_09620 PF00005 ABC transporter BI315_09620 PF09383 NIL domain BI315_09625 PF00892 EamA-like transporter family BI315_09630 PF04461 Protein of unknown function (DUF520) BI315_09640 PF01627 Hpt domain BI315_09640 PF00989 PAS fold BI315_09640 PF00512 His Kinase A (phospho-acceptor) domain BI315_09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_09640 PF00072 Response regulator receiver domain BI315_09640 PF18415 Histidine kinase receptor ArcB trans-membrane domain BI315_09660 PF13419 Haloacid dehalogenase-like hydrolase BI315_09665 PF00849 RNA pseudouridylate synthase BI315_09665 PF01479 S4 domain BI315_09670 PF05175 Methyltransferase small domain BI315_09670 PF08468 Methyltransferase small domain N-terminal BI315_09680 PF07995 Glucose / Sorbosone dehydrogenase BI315_09690 PF00512 His Kinase A (phospho-acceptor) domain BI315_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_09690 PF00989 PAS fold BI315_09710 PF00842 Alanine racemase, C-terminal domain BI315_09710 PF01168 Alanine racemase, N-terminal domain BI315_09715 PF01266 FAD dependent oxidoreductase BI315_09720 PF01037 Lrp/AsnC ligand binding domain BI315_09735 PF01641 SelR domain BI315_09745 PF01618 MotA/TolQ/ExbB proton channel family BI315_09750 PF00691 OmpA family BI315_09750 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI315_09780 PF01061 ABC-2 type transporter BI315_09785 PF00005 ABC transporter BI315_09790 PF00999 Sodium/hydrogen exchanger family BI315_09800 PF02469 Fasciclin domain BI315_09805 PF03167 Uracil DNA glycosylase superfamily BI315_09815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI315_09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_09825 PF03466 LysR substrate binding domain BI315_09830 PF03358 NADPH-dependent FMN reductase BI315_09835 PF00248 Aldo/keto reductase family BI315_09870 PF13520 Amino acid permease BI315_09880 PF04397 LytTr DNA-binding domain BI315_09880 PF00072 Response regulator receiver domain BI315_09885 PF00672 HAMP domain BI315_09885 PF02743 Cache domain BI315_09885 PF06580 Histidine kinase BI315_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_09910 PF05974 Domain of unknown function (DUF892) BI315_09915 PF05067 Manganese containing catalase BI315_09935 PF01339 CheB methylesterase BI315_09935 PF01739 CheR methyltransferase, SAM binding domain BI315_09935 PF08448 PAS fold BI315_09935 PF03705 CheR methyltransferase, all-alpha domain BI315_09950 PF00158 Sigma-54 interaction domain BI315_09950 PF00072 Response regulator receiver domain BI315_09950 PF02954 Bacterial regulatory protein, Fis family BI315_09965 PF01654 Cytochrome bd terminal oxidase subunit I BI315_09970 PF02322 Cytochrome bd terminal oxidase subunit II BI315_09990 PF16363 GDP-mannose 4,6 dehydratase BI315_10000 PF03275 UDP-galactopyranose mutase BI315_10010 PF00005 ABC transporter BI315_10010 PF00664 ABC transporter transmembrane region BI315_10025 PF13823 Alcohol dehydrogenase GroES-associated BI315_10025 PF08240 Alcohol dehydrogenase GroES-like domain BI315_10025 PF00107 Zinc-binding dehydrogenase BI315_10070 PF00593 TonB dependent receptor BI315_10070 PF07715 TonB-dependent Receptor Plug Domain BI315_10085 PF00005 ABC transporter BI315_10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_10095 PF03466 LysR substrate binding domain BI315_10100 PF01042 Endoribonuclease L-PSP BI315_10110 PF01527 Transposase BI315_10130 PF00672 HAMP domain BI315_10130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_10130 PF02203 Tar ligand binding domain homologue BI315_10150 PF02525 Flavodoxin-like fold BI315_10195 PF00557 Metallopeptidase family M24 BI315_10230 PF04546 Sigma-70, non-essential region BI315_10230 PF04539 Sigma-70 region 3 BI315_10230 PF04545 Sigma-70, region 4 BI315_10230 PF03979 Sigma-70 factor, region 1.1 BI315_10230 PF04542 Sigma-70 region 2 BI315_10230 PF00140 Sigma-70 factor, region 1.2 BI315_10235 PF02580 D-Tyr-tRNA(Tyr) deacylase BI315_10240 PF03279 Bacterial lipid A biosynthesis acyltransferase BI315_10260 PF00925 GTP cyclohydrolase II BI315_10280 PF00535 Glycosyl transferase family 2 BI315_10295 PF01189 16S rRNA methyltransferase RsmB/F BI315_10295 PF01029 NusB family BI315_10300 PF02911 Formyl transferase, C-terminal domain BI315_10300 PF00551 Formyl transferase BI315_10305 PF01327 Polypeptide deformylase BI315_10310 PF01476 LysM domain BI315_10315 PF02481 DNA recombination-mediator protein A BI315_10315 PF17782 DprA winged helix domain BI315_10320 PF04361 Protein of unknown function (DUF494) BI315_10325 PF07963 Prokaryotic N-terminal methylation motif BI315_10325 PF00114 Pilin (bacterial filament) BI315_10335 PF01131 DNA topoisomerase BI315_10335 PF01751 Toprim domain BI315_10335 PF13368 Topoisomerase C-terminal repeat BI315_10340 PF01300 Telomere recombination BI315_10365 PF01343 Peptidase family S49 BI315_10370 PF01554 MatE BI315_10390 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BI315_10390 PF18074 Primosomal protein N C-terminal domain BI315_10390 PF17764 3′ DNA-binding domain (3′BD) BI315_10390 PF00271 Helicase conserved C-terminal domain BI315_10390 PF00270 DEAD/DEAH box helicase BI315_10395 PF00043 Glutathione S-transferase, C-terminal domain BI315_10395 PF13417 Glutathione S-transferase, N-terminal domain BI315_10410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_10415 PF03458 UPF0126 domain BI315_10420 PF04545 Sigma-70, region 4 BI315_10420 PF04542 Sigma-70 region 2 BI315_10425 PF03167 Uracil DNA glycosylase superfamily BI315_10430 PF00072 Response regulator receiver domain BI315_10435 PF18075 FtsX extracellular domain BI315_10440 PF00005 ABC transporter BI315_10445 PF00270 DEAD/DEAH box helicase BI315_10445 PF12300 ATP-dependent RNA helicase RhlB BI315_10445 PF00271 Helicase conserved C-terminal domain BI315_10450 PF00085 Thioredoxin BI315_10455 PF07498 Rho termination factor, N-terminal domain BI315_10455 PF07497 Rho termination factor, RNA-binding domain BI315_10455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI315_10460 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BI315_10465 PF03466 LysR substrate binding domain BI315_10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_10475 PF03971 Monomeric isocitrate dehydrogenase BI315_10490 PF09704 CRISPR-associated protein (Cas_Cas5) BI315_10510 PF01867 CRISPR associated protein Cas1 BI315_10515 PF09827 CRISPR associated protein Cas2 BI315_10525 PF04972 BON domain BI315_10525 PF01476 LysM domain BI315_10530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BI315_10530 PF14489 QueF-like protein BI315_10535 PF01546 Peptidase family M20/M25/M40 BI315_10535 PF07687 Peptidase dimerisation domain BI315_10540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_10545 PF00873 AcrB/AcrD/AcrF family BI315_10550 PF00873 AcrB/AcrD/AcrF family BI315_10555 PF07063 Domain of unknown function (DUF1338) BI315_10600 PF01427 D-ala-D-ala dipeptidase BI315_10605 PF01510 N-acetylmuramoyl-L-alanine amidase BI315_10615 PF13378 Enolase C-terminal domain-like BI315_10615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI315_10625 PF13520 Amino acid permease BI315_10640 PF05360 yiaA/B two helix domain BI315_10645 PF07995 Glucose / Sorbosone dehydrogenase BI315_10650 PF14310 Fibronectin type III-like domain BI315_10650 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_10650 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI315_10655 PF02152 Dihydroneopterin aldolase BI315_10660 PF00814 Glycoprotease family BI315_10665 PF01165 Ribosomal protein S21 BI315_10670 PF09424 Yqey-like protein BI315_10680 PF03631 Virulence factor BrkB BI315_10685 PF01807 CHC2 zinc finger BI315_10685 PF10410 DnaB-helicase binding domain of primase BI315_10685 PF08278 DNA primase DnaG DnaB-binding BI315_10685 PF08275 DNA primase catalytic core, N-terminal domain BI315_10690 PF13593 SBF-like CPA transporter family (DUF4137) BI315_10700 PF01040 UbiA prenyltransferase family BI315_10725 PF00510 Cytochrome c oxidase subunit III BI315_10730 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BI315_10740 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI315_10745 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BI315_10745 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI315_10755 PF14850 DNA-binding domain of Proline dehydrogenase BI315_10755 PF00171 Aldehyde dehydrogenase family BI315_10755 PF01619 Proline dehydrogenase BI315_10755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI315_10790 PF00579 tRNA synthetases class I (W and Y) BI315_10795 PF01551 Peptidase family M23 BI315_10795 PF04225 Opacity-associated protein A LysM-like domain BI315_10800 PF03702 Anhydro-N-acetylmuramic acid kinase BI315_10810 PF07690 Major Facilitator Superfamily BI315_10815 PF03372 Endonuclease/Exonuclease/phosphatase family BI315_10820 PF00156 Phosphoribosyl transferase domain BI315_10830 PF13614 AAA domain BI315_10835 PF17762 HTH domain found in ParB protein BI315_10835 PF02195 ParB-like nuclease domain BI315_10850 PF01370 NAD dependent epimerase/dehydratase family BI315_10855 PF00535 Glycosyl transferase family 2 BI315_10870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI315_10870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI315_10870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI315_10870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI315_10875 PF00692 dUTPase BI315_10880 PF02441 Flavoprotein BI315_10880 PF04127 DNA / pantothenate metabolism flavoprotein BI315_10885 PF04002 RadC-like JAB domain BI315_10890 PF03485 Arginyl tRNA synthetase N terminal domain BI315_10890 PF05746 DALR anticodon binding domain BI315_10890 PF00750 tRNA synthetases class I (R) BI315_10905 PF00106 short chain dehydrogenase BI315_10910 PF01757 Acyltransferase family BI315_10915 PF03033 Glycosyltransferase family 28 N-terminal domain BI315_10920 PF00550 Phosphopantetheine attachment site BI315_10920 PF00501 AMP-binding enzyme BI315_10920 PF13193 AMP-binding enzyme C-terminal domain BI315_10920 PF00668 Condensation domain BI315_10920 PF00975 Thioesterase domain BI315_10925 PF17810 Arginine decarboxylase helical bundle domain BI315_10925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI315_10925 PF17944 Arginine decarboxylase C-terminal helical extension BI315_10930 PF17284 Spermidine synthase tetramerisation domain BI315_10960 PF00543 Nitrogen regulatory protein P-II BI315_10965 PF04380 Membrane fusogenic activity BI315_10970 PF13335 Magnesium chelatase, subunit ChlI C-terminal BI315_10970 PF01078 Magnesium chelatase, subunit ChlI BI315_10985 PF00563 EAL domain BI315_10985 PF12792 CSS motif domain associated with EAL BI315_10990 PF00487 Fatty acid desaturase BI315_10995 PF00111 2Fe-2S iron-sulfur cluster binding domain BI315_10995 PF00970 Oxidoreductase FAD-binding domain BI315_10995 PF00175 Oxidoreductase NAD-binding domain BI315_11000 PF00440 Bacterial regulatory proteins, tetR family BI315_11025 PF01139 tRNA-splicing ligase RtcB BI315_11060 PF08338 Domain of unknown function (DUF1731) BI315_11060 PF01370 NAD dependent epimerase/dehydratase family BI315_11065 PF00072 Response regulator receiver domain BI315_11065 PF00486 Transcriptional regulatory protein, C terminal BI315_11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_11070 PF08521 Two-component sensor kinase N-terminal BI315_11070 PF00512 His Kinase A (phospho-acceptor) domain BI315_11100 PF00595 PDZ domain BI315_11120 PF01594 AI-2E family transporter BI315_11125 PF13419 Haloacid dehalogenase-like hydrolase BI315_11130 PF02789 Cytosol aminopeptidase family, N-terminal domain BI315_11130 PF00883 Cytosol aminopeptidase family, catalytic domain BI315_11140 PF08281 Sigma-70, region 4 BI315_11140 PF04542 Sigma-70 region 2 BI315_11145 PF00199 Catalase BI315_11160 PF00072 Response regulator receiver domain BI315_11160 PF00196 Bacterial regulatory proteins, luxR family BI315_11165 PF07730 Histidine kinase BI315_11170 PF13533 Biotin-lipoyl like BI315_11175 PF00005 ABC transporter BI315_11200 PF00892 EamA-like transporter family BI315_11220 PF00753 Metallo-beta-lactamase superfamily BI315_11225 PF00579 tRNA synthetases class I (W and Y) BI315_11230 PF05532 CsbD-like BI315_11245 PF00491 Arginase family BI315_11275 PF02223 Thymidylate kinase BI315_11290 PF03309 Type III pantothenate kinase BI315_11295 PF03099 Biotin/lipoate A/B protein ligase family BI315_11295 PF08279 HTH domain BI315_11295 PF02237 Biotin protein ligase C terminal domain BI315_11310 PF06167 Glucose-regulated metallo-peptidase M90 BI315_11325 PF00672 HAMP domain BI315_11325 PF00512 His Kinase A (phospho-acceptor) domain BI315_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_11330 PF00072 Response regulator receiver domain BI315_11330 PF00486 Transcriptional regulatory protein, C terminal BI315_11340 PF01207 Dihydrouridine synthase (Dus) BI315_11365 PF00199 Catalase BI315_11365 PF06628 Catalase-related immune-responsive BI315_11370 PF00199 Catalase BI315_11370 PF06628 Catalase-related immune-responsive BI315_11380 PF13307 Helicase C-terminal domain BI315_11380 PF06733 DEAD_2 BI315_11395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BI315_11395 PF01488 Shikimate / quinate 5-dehydrogenase BI315_11395 PF08501 Shikimate dehydrogenase substrate binding domain BI315_11405 PF00258 Flavodoxin BI315_11405 PF00667 FAD binding domain BI315_11405 PF00175 Oxidoreductase NAD-binding domain BI315_11415 PF03466 LysR substrate binding domain BI315_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_11430 PF00490 Delta-aminolevulinic acid dehydratase BI315_11455 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI315_11455 PF00326 Prolyl oligopeptidase family BI315_11460 PF00043 Glutathione S-transferase, C-terminal domain BI315_11460 PF02798 Glutathione S-transferase, N-terminal domain BI315_11485 PF04820 Tryptophan halogenase BI315_11500 PF00005 ABC transporter BI315_11510 PF01381 Helix-turn-helix BI315_11520 PF01229 Glycosyl hydrolases family 39 BI315_11525 PF02583 Metal-sensitive transcriptional repressor BI315_11530 PF01545 Cation efflux family BI315_11530 PF16916 Dimerisation domain of Zinc Transporter BI315_11540 PF07715 TonB-dependent Receptor Plug Domain BI315_11540 PF00593 TonB dependent receptor BI315_11550 PF12833 Helix-turn-helix domain BI315_11550 PF01965 DJ-1/PfpI family BI315_11555 PF00175 Oxidoreductase NAD-binding domain BI315_11555 PF00111 2Fe-2S iron-sulfur cluster binding domain BI315_11555 PF00970 Oxidoreductase FAD-binding domain BI315_11560 PF00005 ABC transporter BI315_11565 PF01061 ABC-2 type transporter BI315_11575 PF08546 Ketopantoate reductase PanE/ApbA C terminal BI315_11575 PF02558 Ketopantoate reductase PanE/ApbA BI315_11610 PF00268 Ribonucleotide reductase, small chain BI315_11620 PF02867 Ribonucleotide reductase, barrel domain BI315_11620 PF03477 ATP cone domain BI315_11620 PF00317 Ribonucleotide reductase, all-alpha domain BI315_11635 PF00583 Acetyltransferase (GNAT) family BI315_11635 PF13380 CoA binding domain BI315_11635 PF13607 Succinyl-CoA ligase like flavodoxin domain BI315_11640 PF00571 CBS domain BI315_11640 PF03448 MgtE intracellular N domain BI315_11640 PF01769 Divalent cation transporter BI315_11655 PF02254 TrkA-N domain BI315_11655 PF00999 Sodium/hydrogen exchanger family BI315_11660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI315_11660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI315_11665 PF00723 Glycosyl hydrolases family 15 BI315_11680 PF05166 YcgL domain BI315_11685 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_11685 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_11695 PF00535 Glycosyl transferase family 2 BI315_11755 PF07977 FabA-like domain BI315_11760 PF01553 Acyltransferase BI315_11770 PF00550 Phosphopantetheine attachment site BI315_11775 PF04820 Tryptophan halogenase BI315_11800 PF00326 Prolyl oligopeptidase family BI315_11800 PF07676 WD40-like Beta Propeller Repeat BI315_11820 PF01218 Coproporphyrinogen III oxidase BI315_11830 PF01612 3'-5' exonuclease BI315_11830 PF00476 DNA polymerase family A BI315_11830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI315_11830 PF01367 5'-3' exonuclease, C-terminal SAM fold BI315_11860 PF03793 PASTA domain BI315_11860 PF00069 Protein kinase domain BI315_11900 PF04717 Type VI secretion system, phage-baseplate injector BI315_11915 PF03793 PASTA domain BI315_11915 PF00069 Protein kinase domain BI315_11925 PF04542 Sigma-70 region 2 BI315_11925 PF08281 Sigma-70, region 4 BI315_11945 PF00328 Histidine phosphatase superfamily (branch 2) BI315_11980 PF17871 AAA lid domain BI315_11980 PF07724 AAA domain (Cdc48 subfamily) BI315_11980 PF00004 ATPase family associated with various cellular activities (AAA) BI315_11980 PF10431 C-terminal, D2-small domain, of ClpB protein BI315_12005 PF05638 Type VI secretion system effector, Hcp BI315_12030 PF12464 Maltose acetyltransferase BI315_12030 PF14602 Hexapeptide repeat of succinyl-transferase BI315_12035 PF13361 UvrD-like helicase C-terminal domain BI315_12035 PF00580 UvrD/REP helicase N-terminal domain BI315_12050 PF13091 PLD-like domain BI315_12050 PF13396 Phospholipase_D-nuclease N-terminal BI315_12055 PF03466 LysR substrate binding domain BI315_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_12060 PF03737 Aldolase/RraA BI315_12065 PF04303 PrpF protein BI315_12075 PF04909 Amidohydrolase BI315_12080 PF00471 Ribosomal protein L33 BI315_12085 PF00830 Ribosomal L28 family BI315_12090 PF00873 AcrB/AcrD/AcrF family BI315_12095 PF13533 Biotin-lipoyl like BI315_12115 PF02527 rRNA small subunit methyltransferase G BI315_12120 PF16655 PhoD-like phosphatase, N-terminal domain BI315_12120 PF09423 PhoD-like phosphatase BI315_12125 PF09423 PhoD-like phosphatase BI315_12125 PF16655 PhoD-like phosphatase, N-terminal domain BI315_12130 PF01648 4'-phosphopantetheinyl transferase superfamily BI315_12135 PF04226 Transglycosylase associated protein BI315_12145 PF03372 Endonuclease/Exonuclease/phosphatase family BI315_12150 PF00480 ROK family BI315_12160 PF09312 SurA N-terminal domain BI315_12170 PF00474 Sodium:solute symporter family BI315_12175 PF04341 Protein of unknown function, DUF485 BI315_12185 PF16177 Acetyl-coenzyme A synthetase N-terminus BI315_12185 PF00501 AMP-binding enzyme BI315_12185 PF13193 AMP-binding enzyme C-terminal domain BI315_12190 PF00196 Bacterial regulatory proteins, luxR family BI315_12190 PF00072 Response regulator receiver domain BI315_12215 PF04616 Glycosyl hydrolases family 43 BI315_12215 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI315_12225 PF00248 Aldo/keto reductase family BI315_12240 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI315_12250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI315_12250 PF13378 Enolase C-terminal domain-like BI315_12260 PF05336 L-rhamnose mutarotase BI315_12265 PF07690 Major Facilitator Superfamily BI315_12270 PF01614 Bacterial transcriptional regulator BI315_12270 PF09339 IclR helix-turn-helix domain BI315_12275 PF02659 Putative manganese efflux pump BI315_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_12280 PF00512 His Kinase A (phospho-acceptor) domain BI315_12295 PF06165 Glycosyltransferase family 36 BI315_12295 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BI315_12315 PF13360 PQQ-like domain BI315_12315 PF13570 PQQ-like domain BI315_12315 PF01011 PQQ enzyme repeat BI315_12335 PF04357 TamB, inner membrane protein subunit of TAM complex BI315_12340 PF01103 Surface antigen BI315_12340 PF17243 POTRA domain TamA domain 1 BI315_12370 PF05746 DALR anticodon binding domain BI315_12370 PF02092 Glycyl-tRNA synthetase beta subunit BI315_12375 PF02091 Glycyl-tRNA synthetase alpha subunit BI315_12380 PF00437 Type II/IV secretion system protein BI315_12380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI315_12395 PF00117 Glutamine amidotransferase class-I BI315_12395 PF00958 GMP synthase C terminal domain BI315_12405 PF00902 Sec-independent protein translocase protein (TatC) BI315_12410 PF02416 mttA/Hcf106 family BI315_12415 PF02416 mttA/Hcf106 family BI315_12425 PF00762 Ferrochelatase BI315_12430 PF12697 Alpha/beta hydrolase family BI315_12450 PF04381 Putative exonuclease, RdgC BI315_12455 PF01171 PP-loop family BI315_12470 PF00356 Bacterial regulatory proteins, lacI family BI315_12475 PF03648 Glycosyl hydrolase family 67 N-terminus BI315_12475 PF07488 Glycosyl hydrolase family 67 middle domain BI315_12475 PF07477 Glycosyl hydrolase family 67 C-terminus BI315_12485 PF13378 Enolase C-terminal domain-like BI315_12485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI315_12490 PF04616 Glycosyl hydrolases family 43 BI315_12490 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI315_12495 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_12495 PF14310 Fibronectin type III-like domain BI315_12495 PF07691 PA14 domain BI315_12495 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI315_12500 PF01232 Mannitol dehydrogenase Rossmann domain BI315_12500 PF08125 Mannitol dehydrogenase C-terminal domain BI315_12530 PF00171 Aldehyde dehydrogenase family BI315_12555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI315_12555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI315_12575 PF08450 SMP-30/Gluconolactonase/LRE-like region BI315_12580 PF00331 Glycosyl hydrolase family 10 BI315_12585 PF16355 Domain of unknown function (DUF4982) BI315_12585 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI315_12585 PF00703 Glycosyl hydrolases family 2 BI315_12585 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI315_12585 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI315_12605 PF00331 Glycosyl hydrolase family 10 BI315_12605 PF00553 Cellulose binding domain BI315_12605 PF03422 Carbohydrate binding module (family 6) BI315_12625 PF04616 Glycosyl hydrolases family 43 BI315_12680 PF00550 Phosphopantetheine attachment site BI315_12680 PF16197 Ketoacyl-synthetase C-terminal extension BI315_12680 PF00698 Acyl transferase domain BI315_12680 PF08659 KR domain BI315_12680 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_12680 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_12680 PF08240 Alcohol dehydrogenase GroES-like domain BI315_12680 PF00107 Zinc-binding dehydrogenase BI315_12680 PF14765 Polyketide synthase dehydratase BI315_12685 PF01553 Acyltransferase BI315_12700 PF00356 Bacterial regulatory proteins, lacI family BI315_12715 PF04820 Tryptophan halogenase BI315_12720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BI315_12725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BI315_12735 PF04337 Protein of unknown function, DUF480 BI315_12750 PF13361 UvrD-like helicase C-terminal domain BI315_12750 PF00580 UvrD/REP helicase N-terminal domain BI315_12755 PF00265 Thymidine kinase BI315_12760 PF01590 GAF domain BI315_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_12760 PF00360 Phytochrome region BI315_12760 PF08446 PAS fold BI315_12760 PF00512 His Kinase A (phospho-acceptor) domain BI315_12765 PF04349 Periplasmic glucan biosynthesis protein, MdoG BI315_12775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI315_12775 PF06827 Zinc finger found in FPG and IleRS BI315_12775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI315_12810 PF03594 Benzoate membrane transport protein BI315_12815 PF00360 Phytochrome region BI315_12815 PF01590 GAF domain BI315_12815 PF08446 PAS fold BI315_12815 PF13426 PAS domain BI315_12820 PF01126 Heme oxygenase BI315_12825 PF07690 Major Facilitator Superfamily BI315_12830 PF01263 Aldose 1-epimerase BI315_12840 PF02810 SEC-C motif BI315_12845 PF01925 Sulfite exporter TauE/SafE BI315_12865 PF01227 GTP cyclohydrolase I BI315_12875 PF07869 Protein of unknown function (DUF1656) BI315_12880 PF00529 HlyD membrane-fusion protein of T1SS BI315_12880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_12885 PF02321 Outer membrane efflux protein BI315_12890 PF04632 Fusaric acid resistance protein family BI315_12895 PF00083 Sugar (and other) transporter BI315_12900 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BI315_12905 PF13091 PLD-like domain BI315_12905 PF13396 Phospholipase_D-nuclease N-terminal BI315_12930 PF01850 PIN domain BI315_12955 PF00849 RNA pseudouridylate synthase BI315_12995 PF02785 Biotin carboxylase C-terminal domain BI315_12995 PF00289 Biotin carboxylase, N-terminal domain BI315_12995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI315_13000 PF01425 Amidase BI315_13040 PF13538 UvrD-like helicase C-terminal domain BI315_13045 PF13361 UvrD-like helicase C-terminal domain BI315_13045 PF12705 PD-(D/E)XK nuclease superfamily BI315_13045 PF00580 UvrD/REP helicase N-terminal domain BI315_13050 PF17946 RecC C-terminal domain BI315_13065 PF00005 ABC transporter BI315_13070 PF02405 Permease MlaE BI315_13075 PF02470 MlaD protein BI315_13080 PF05494 MlaC protein BI315_13090 PF04333 MlaA lipoprotein BI315_13100 PF00255 Glutathione peroxidase BI315_13110 PF02646 RmuC family BI315_13115 PF00107 Zinc-binding dehydrogenase BI315_13115 PF08240 Alcohol dehydrogenase GroES-like domain BI315_13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_13120 PF03466 LysR substrate binding domain BI315_13135 PF00043 Glutathione S-transferase, C-terminal domain BI315_13135 PF13417 Glutathione S-transferase, N-terminal domain BI315_13145 PF13520 Amino acid permease BI315_13150 PF07971 Glycosyl hydrolase family 92 BI315_13150 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI315_13160 PF10947 Protein of unknown function (DUF2628) BI315_13165 PF00990 Diguanylate cyclase, GGDEF domain BI315_13170 PF13556 PucR C-terminal helix-turn-helix domain BI315_13170 PF17853 GGDEF-like domain BI315_13170 PF05651 Putative sugar diacid recognition BI315_13175 PF02595 Glycerate kinase family BI315_13180 PF07690 Major Facilitator Superfamily BI315_13195 PF10672 S-adenosylmethionine-dependent methyltransferase BI315_13195 PF17785 PUA-like domain BI315_13205 PF03741 Integral membrane protein TerC family BI315_13215 PF01694 Rhomboid family BI315_13220 PF03009 Glycerophosphoryl diester phosphodiesterase family BI315_13230 PF01569 PAP2 superfamily BI315_13235 PF01926 50S ribosome-binding GTPase BI315_13235 PF12631 MnmE helical domain BI315_13235 PF10396 GTP-binding protein TrmE N-terminus BI315_13240 PF01522 Polysaccharide deacetylase BI315_13245 PF14849 YidC periplasmic domain BI315_13245 PF02096 60Kd inner membrane protein BI315_13250 PF00825 Ribonuclease P BI315_13255 PF00468 Ribosomal protein L34 BI315_13265 PF00308 Bacterial dnaA protein BI315_13265 PF08299 Bacterial dnaA protein helix-turn-helix BI315_13265 PF11638 DnaA N-terminal domain BI315_13270 PF02767 DNA polymerase III beta subunit, central domain BI315_13270 PF02768 DNA polymerase III beta subunit, C-terminal domain BI315_13270 PF00712 DNA polymerase III beta subunit, N-terminal domain BI315_13275 PF02463 RecF/RecN/SMC N terminal domain BI315_13280 PF01751 Toprim domain BI315_13280 PF00204 DNA gyrase B BI315_13280 PF00986 DNA gyrase B subunit, carboxyl terminus BI315_13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_13280 PF18053 DNA gyrase B subunit insert domain BI315_13290 PF01435 Peptidase family M48 BI315_13300 PF03544 Gram-negative bacterial TonB protein C-terminal BI315_13305 PF01618 MotA/TolQ/ExbB proton channel family BI315_13310 PF02472 Biopolymer transport protein ExbD/TolR BI315_13315 PF02472 Biopolymer transport protein ExbD/TolR BI315_13320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BI315_13330 PF13396 Phospholipase_D-nuclease N-terminal BI315_13330 PF13091 PLD-like domain BI315_13345 PF04055 Radical SAM superfamily BI315_13355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BI315_13370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI315_13370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI315_13375 PF13180 PDZ domain BI315_13375 PF03572 Peptidase family S41 BI315_13380 PF01551 Peptidase family M23 BI315_13390 PF04389 Peptidase family M28 BI315_13400 PF00150 Cellulase (glycosyl hydrolase family 5) BI315_13410 PF00150 Cellulase (glycosyl hydrolase family 5) BI315_13415 PF00150 Cellulase (glycosyl hydrolase family 5) BI315_13425 PF08240 Alcohol dehydrogenase GroES-like domain BI315_13425 PF00107 Zinc-binding dehydrogenase BI315_13435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BI315_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_13440 PF00310 Glutamine amidotransferases class-II BI315_13440 PF04898 Glutamate synthase central domain BI315_13440 PF01493 GXGXG motif BI315_13440 PF01645 Conserved region in glutamate synthase BI315_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_13470 PF03466 LysR substrate binding domain BI315_13490 PF02397 Bacterial sugar transferase BI315_13495 PF02350 UDP-N-acetylglucosamine 2-epimerase BI315_13505 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI315_13510 PF00534 Glycosyl transferases group 1 BI315_13510 PF13439 Glycosyltransferase Family 4 BI315_13530 PF00733 Asparagine synthase BI315_13530 PF13537 Glutamine amidotransferase domain BI315_13545 PF16363 GDP-mannose 4,6 dehydratase BI315_13560 PF00005 ABC transporter BI315_13560 PF00664 ABC transporter transmembrane region BI315_13575 PF13537 Glutamine amidotransferase domain BI315_13575 PF00733 Asparagine synthase BI315_13595 PF00685 Sulfotransferase domain BI315_13685 PF09369 Domain of unknown function (DUF1998) BI315_13685 PF00271 Helicase conserved C-terminal domain BI315_13685 PF00270 DEAD/DEAH box helicase BI315_13690 PF03006 Haemolysin-III related BI315_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_13720 PF03466 LysR substrate binding domain BI315_13740 PF02525 Flavodoxin-like fold BI315_13755 PF13276 HTH-like domain BI315_13755 PF00665 Integrase core domain BI315_13755 PF13333 Integrase core domain BI315_13810 PF05532 CsbD-like BI315_13830 PF01447 Thermolysin metallopeptidase, catalytic domain BI315_13830 PF16485 Protealysin propeptide BI315_13830 PF02868 Thermolysin metallopeptidase, alpha-helical domain BI315_13840 PF13344 Haloacid dehalogenase-like hydrolase BI315_13840 PF00293 NUDIX domain BI315_13860 PF00085 Thioredoxin BI315_13870 PF08946 Osmosensory transporter coiled coil BI315_13870 PF00083 Sugar (and other) transporter BI315_13910 PF07726 ATPase family associated with various cellular activities (AAA) BI315_13910 PF17863 AAA lid domain BI315_13940 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BI315_13945 PF00155 Aminotransferase class I and II BI315_13950 PF00593 TonB dependent receptor BI315_13950 PF07715 TonB-dependent Receptor Plug Domain BI315_13960 PF07883 Cupin domain BI315_13965 PF00171 Aldehyde dehydrogenase family BI315_13985 PF02735 Ku70/Ku80 beta-barrel domain BI315_13990 PF01070 FMN-dependent dehydrogenase BI315_14000 PF00144 Beta-lactamase BI315_14005 PF07730 Histidine kinase BI315_14010 PF00196 Bacterial regulatory proteins, luxR family BI315_14010 PF00072 Response regulator receiver domain BI315_14030 PF18500 CadC C-terminal domain 1 BI315_14030 PF00486 Transcriptional regulatory protein, C terminal BI315_14035 PF07055 Enoyl reductase FAD binding domain BI315_14035 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BI315_14035 PF12241 Trans-2-enoyl-CoA reductase catalytic region BI315_14045 PF00294 pfkB family carbohydrate kinase BI315_14125 PF11896 Domain of unknown function (DUF3416) BI315_14125 PF00128 Alpha amylase, catalytic domain BI315_14130 PF16657 Maltogenic Amylase, C-terminal domain BI315_14130 PF00128 Alpha amylase, catalytic domain BI315_14135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI315_14135 PF00128 Alpha amylase, catalytic domain BI315_14135 PF02806 Alpha amylase, C-terminal all-beta domain BI315_14150 PF00248 Aldo/keto reductase family BI315_14155 PF00135 Carboxylesterase family BI315_14160 PF13472 GDSL-like Lipase/Acylhydrolase family BI315_14160 PF07859 alpha/beta hydrolase fold BI315_14170 PF03480 Bacterial extracellular solute-binding protein, family 7 BI315_14180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BI315_14185 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI315_14185 PF04616 Glycosyl hydrolases family 43 BI315_14190 PF00356 Bacterial regulatory proteins, lacI family BI315_14205 PF04962 KduI/IolB family BI315_14220 PF00657 GDSL-like Lipase/Acylhydrolase BI315_14235 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BI315_14240 PF01037 Lrp/AsnC ligand binding domain BI315_14245 PF07715 TonB-dependent Receptor Plug Domain BI315_14245 PF07660 Secretin and TonB N terminus short domain BI315_14245 PF00593 TonB dependent receptor BI315_14250 PF01734 Patatin-like phospholipase BI315_14260 PF00005 ABC transporter BI315_14275 PF00005 ABC transporter BI315_14280 PF00528 Binding-protein-dependent transport system inner membrane component BI315_14290 PF03781 Sulfatase-modifying factor enzyme 1 BI315_14290 PF12867 DinB superfamily BI315_14310 PF01381 Helix-turn-helix BI315_14335 PF01883 Iron-sulfur cluster assembly protein BI315_14335 PF10609 NUBPL iron-transfer P-loop NTPase BI315_14350 PF13091 PLD-like domain BI315_14355 PF03061 Thioesterase superfamily BI315_14385 PF08240 Alcohol dehydrogenase GroES-like domain BI315_14385 PF00107 Zinc-binding dehydrogenase BI315_14395 PF02673 Bacitracin resistance protein BacA BI315_14405 PF00120 Glutamine synthetase, catalytic domain BI315_14405 PF03951 Glutamine synthetase, beta-Grasp domain BI315_14410 PF00543 Nitrogen regulatory protein P-II BI315_14415 PF00909 Ammonium Transporter Family BI315_14420 PF00989 PAS fold BI315_14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_14420 PF00512 His Kinase A (phospho-acceptor) domain BI315_14425 PF00158 Sigma-54 interaction domain BI315_14425 PF00072 Response regulator receiver domain BI315_14425 PF02954 Bacterial regulatory protein, Fis family BI315_14430 PF00080 Copper/zinc superoxide dismutase (SODC) BI315_14435 PF00080 Copper/zinc superoxide dismutase (SODC) BI315_14445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI315_14455 PF00108 Thiolase, N-terminal domain BI315_14455 PF02803 Thiolase, C-terminal domain BI315_14490 PF00581 Rhodanese-like domain BI315_14495 PF02556 Preprotein translocase subunit SecB BI315_14500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BI315_14500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BI315_14515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI315_14515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI315_14515 PF00205 Thiamine pyrophosphate enzyme, central domain BI315_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_14525 PF00158 Sigma-54 interaction domain BI315_14525 PF00072 Response regulator receiver domain BI315_14525 PF02954 Bacterial regulatory protein, Fis family BI315_14540 PF07690 Major Facilitator Superfamily BI315_14545 PF00588 SpoU rRNA Methylase family BI315_14560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI315_14560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI315_14565 PF13784 Fic/DOC family N-terminal BI315_14565 PF02661 Fic/DOC family BI315_14570 PF00561 alpha/beta hydrolase fold BI315_14575 PF03692 Putative zinc- or iron-chelating domain BI315_14580 PF00501 AMP-binding enzyme BI315_14585 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI315_14600 PF07478 D-ala D-ala ligase C-terminus BI315_14600 PF01820 D-ala D-ala ligase N-terminus BI315_14615 PF03109 ABC1 family BI315_14625 PF00849 RNA pseudouridylate synthase BI315_14635 PF00472 RF-1 domain BI315_14645 PF01112 Asparaginase BI315_14650 PF01432 Peptidase family M3 BI315_14655 PF12706 Beta-lactamase superfamily domain BI315_14675 PF12833 Helix-turn-helix domain BI315_14680 PF00999 Sodium/hydrogen exchanger family BI315_14685 PF03466 LysR substrate binding domain BI315_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_14690 PF01274 Malate synthase BI315_14695 PF00463 Isocitrate lyase family BI315_14700 PF00990 Diguanylate cyclase, GGDEF domain BI315_14720 PF00326 Prolyl oligopeptidase family BI315_14725 PF00364 Biotin-requiring enzyme BI315_14725 PF02785 Biotin carboxylase C-terminal domain BI315_14725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI315_14725 PF00289 Biotin carboxylase, N-terminal domain BI315_14730 PF01039 Carboxyl transferase domain BI315_14735 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_14735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_14795 PF02492 CobW/HypB/UreG, nucleotide-binding domain BI315_14795 PF07683 Cobalamin synthesis protein cobW C-terminal domain BI315_14815 PF03969 AFG1-like ATPase BI315_14820 PF01047 MarR family BI315_14825 PF02566 OsmC-like protein BI315_14855 PF00107 Zinc-binding dehydrogenase BI315_14855 PF16884 N-terminal domain of oxidoreductase BI315_14870 PF00849 RNA pseudouridylate synthase BI315_14875 PF00593 TonB dependent receptor BI315_14885 PF00270 DEAD/DEAH box helicase BI315_14885 PF08482 ATP-dependent helicase C-terminal BI315_14885 PF00271 Helicase conserved C-terminal domain BI315_14885 PF04408 Helicase associated domain (HA2) BI315_14895 PF07308 Protein of unknown function (DUF1456) BI315_14900 PF00576 HIUase/Transthyretin family BI315_14910 PF09349 OHCU decarboxylase BI315_14910 PF01014 Uricase BI315_14925 PF00266 Aminotransferase class-V BI315_14930 PF01546 Peptidase family M20/M25/M40 BI315_14930 PF07687 Peptidase dimerisation domain BI315_14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_14935 PF03466 LysR substrate binding domain BI315_14940 PF07690 Major Facilitator Superfamily BI315_14955 PF01425 Amidase BI315_14970 PF00860 Permease family BI315_14980 PF00111 2Fe-2S iron-sulfur cluster binding domain BI315_14985 PF00355 Rieske [2Fe-2S] domain BI315_14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_14990 PF03466 LysR substrate binding domain BI315_14995 PF01026 TatD related DNase BI315_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_15010 PF03466 LysR substrate binding domain BI315_15015 PF07690 Major Facilitator Superfamily BI315_15030 PF02146 Sir2 family BI315_15035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI315_15040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI315_15040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI315_15050 PF00551 Formyl transferase BI315_15055 PF00486 Transcriptional regulatory protein, C terminal BI315_15055 PF00072 Response regulator receiver domain BI315_15060 PF00672 HAMP domain BI315_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_15060 PF00512 His Kinase A (phospho-acceptor) domain BI315_15065 PF00529 HlyD membrane-fusion protein of T1SS BI315_15065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_15070 PF00873 AcrB/AcrD/AcrF family BI315_15075 PF02321 Outer membrane efflux protein BI315_15085 PF02219 Methylenetetrahydrofolate reductase BI315_15090 PF02677 Epoxyqueuosine reductase QueH BI315_15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_15095 PF03466 LysR substrate binding domain BI315_15100 PF03358 NADPH-dependent FMN reductase BI315_15110 PF08267 Cobalamin-independent synthase, N-terminal domain BI315_15110 PF01717 Cobalamin-independent synthase, Catalytic domain BI315_15115 PF03812 2-keto-3-deoxygluconate permease BI315_15130 PF05368 NmrA-like family BI315_15135 PF01638 HxlR-like helix-turn-helix BI315_15170 PF13495 Phage integrase, N-terminal SAM-like domain BI315_15170 PF00589 Phage integrase family BI315_15175 PF00920 Dehydratase family BI315_15190 PF00132 Bacterial transferase hexapeptide (six repeats) BI315_15200 PF07690 Major Facilitator Superfamily BI315_15205 PF01966 HD domain BI315_15205 PF11871 Domain of unknown function (DUF3391) BI315_15225 PF00171 Aldehyde dehydrogenase family BI315_15235 PF01494 FAD binding domain BI315_15245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI315_15245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI315_15250 PF00230 Major intrinsic protein BI315_15255 PF01266 FAD dependent oxidoreductase BI315_15255 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BI315_15260 PF08220 DeoR-like helix-turn-helix domain BI315_15260 PF00455 DeoR C terminal sensor domain BI315_15270 PF00355 Rieske [2Fe-2S] domain BI315_15275 PF01144 Coenzyme A transferase BI315_15280 PF01144 Coenzyme A transferase BI315_15285 PF00108 Thiolase, N-terminal domain BI315_15285 PF02803 Thiolase, C-terminal domain BI315_15290 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BI315_15290 PF00775 Dioxygenase BI315_15300 PF00206 Lyase BI315_15300 PF10397 Adenylosuccinate lyase C-terminus BI315_15305 PF12146 Serine aminopeptidase, S33 BI315_15310 PF02627 Carboxymuconolactone decarboxylase family BI315_15320 PF09339 IclR helix-turn-helix domain BI315_15320 PF01614 Bacterial transcriptional regulator BI315_15330 PF07859 alpha/beta hydrolase fold BI315_15335 PF10677 Protein of unknown function (DUF2490) BI315_15340 PF01134 Glucose inhibited division protein A BI315_15340 PF13932 GidA associated domain BI315_15350 PF00291 Pyridoxal-phosphate dependent enzyme BI315_15370 PF13649 Methyltransferase domain BI315_15380 PF12697 Alpha/beta hydrolase family BI315_15390 PF00155 Aminotransferase class I and II BI315_15395 PF04055 Radical SAM superfamily BI315_15395 PF06968 Biotin and Thiamin Synthesis associated domain BI315_15405 PF01040 UbiA prenyltransferase family BI315_15430 PF05819 NolX protein BI315_15465 PF01313 Bacterial export proteins, family 3 BI315_15470 PF00813 FliP family BI315_15485 PF00771 FHIPEP family BI315_15490 PF01312 FlhB HrpN YscU SpaS Family BI315_15505 PF01514 Secretory protein of YscJ/FliF family BI315_15520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI315_15520 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI315_15520 PF18269 T3SS EscN ATPase C-terminal domain BI315_15530 PF01311 Bacterial export proteins, family 1 BI315_15545 PF01464 Transglycosylase SLT domain BI315_15565 PF12794 Mechanosensitive ion channel inner membrane domain 1 BI315_15565 PF00924 Mechanosensitive ion channel BI315_15565 PF12795 Mechanosensitive ion channel porin domain BI315_15570 PF00884 Sulfatase BI315_15580 PF03109 ABC1 family BI315_15585 PF05661 Protein of unknown function (DUF808) BI315_15590 PF00072 Response regulator receiver domain BI315_15590 PF00990 Diguanylate cyclase, GGDEF domain BI315_15595 PF08323 Starch synthase catalytic domain BI315_15595 PF00534 Glycosyl transferases group 1 BI315_15600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI315_15600 PF00128 Alpha amylase, catalytic domain BI315_15600 PF02806 Alpha amylase, C-terminal all-beta domain BI315_15605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI315_15605 PF00128 Alpha amylase, catalytic domain BI315_15605 PF11941 Domain of unknown function (DUF3459) BI315_15610 PF02446 4-alpha-glucanotransferase BI315_15615 PF00128 Alpha amylase, catalytic domain BI315_15625 PF00128 Alpha amylase, catalytic domain BI315_15625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI315_15630 PF13460 NAD(P)H-binding BI315_15650 PF06903 VirK protein BI315_15655 PF02321 Outer membrane efflux protein BI315_15670 PF00873 AcrB/AcrD/AcrF family BI315_15685 PF00270 DEAD/DEAH box helicase BI315_15685 PF00271 Helicase conserved C-terminal domain BI315_15690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI315_15690 PF00364 Biotin-requiring enzyme BI315_15690 PF02817 e3 binding domain BI315_15700 PF02780 Transketolase, C-terminal domain BI315_15700 PF02779 Transketolase, pyrimidine binding domain BI315_15705 PF00676 Dehydrogenase E1 component BI315_15715 PF03301 Tryptophan 2,3-dioxygenase BI315_15720 PF00854 POT family BI315_15730 PF01047 MarR family BI315_15735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI315_15745 PF04209 homogentisate 1,2-dioxygenase BI315_15765 PF03334 Na+/H+ antiporter subunit BI315_15770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BI315_15780 PF00361 Proton-conducting membrane transporter BI315_15785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI315_15790 PF13244 Domain of unknown function (DUF4040) BI315_15790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI315_15790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BI315_15790 PF00361 Proton-conducting membrane transporter BI315_15835 PF01259 SAICAR synthetase BI315_15840 PF05099 Tellurite resistance protein TerB BI315_15840 PF00226 DnaJ domain BI315_15850 PF00834 Ribulose-phosphate 3 epimerase family BI315_15855 PF00583 Acetyltransferase (GNAT) family BI315_15860 PF00781 Diacylglycerol kinase catalytic domain BI315_15865 PF04715 Anthranilate synthase component I, N terminal region BI315_15865 PF00425 chorismate binding enzyme BI315_15875 PF00117 Glutamine amidotransferase class-I BI315_15885 PF00591 Glycosyl transferase family, a/b domain BI315_15885 PF02885 Glycosyl transferase family, helical bundle domain BI315_15890 PF00218 Indole-3-glycerol phosphate synthase BI315_15900 PF00325 Bacterial regulatory proteins, crp family BI315_15900 PF00027 Cyclic nucleotide-binding domain BI315_15905 PF02675 S-adenosylmethionine decarboxylase BI315_15910 PF00893 Small Multidrug Resistance protein BI315_15915 PF03232 Ubiquinone biosynthesis protein COQ7 BI315_15920 PF00572 Ribosomal protein L13 BI315_15925 PF00380 Ribosomal protein S9/S16 BI315_15940 PF00293 NUDIX domain BI315_15950 PF00210 Ferritin-like domain BI315_15955 PF00512 His Kinase A (phospho-acceptor) domain BI315_15955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_15955 PF01627 Hpt domain BI315_15955 PF00072 Response regulator receiver domain BI315_15955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI315_15955 PF00672 HAMP domain BI315_15960 PF00486 Transcriptional regulatory protein, C terminal BI315_15960 PF00072 Response regulator receiver domain BI315_15980 PF01521 Iron-sulphur cluster biosynthesis BI315_16005 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BI315_16005 PF00293 NUDIX domain BI315_16005 PF09297 NADH pyrophosphatase zinc ribbon domain BI315_16010 PF03186 CobD/Cbib protein BI315_16010 PF17113 Regulatory signalling modulator protein AmpE BI315_16025 PF07690 Major Facilitator Superfamily BI315_16030 PF03466 LysR substrate binding domain BI315_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_16035 PF07690 Major Facilitator Superfamily BI315_16040 PF12805 FUSC-like inner membrane protein yccS BI315_16050 PF02843 Phosphoribosylglycinamide synthetase, C domain BI315_16050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BI315_16050 PF02844 Phosphoribosylglycinamide synthetase, N domain BI315_16060 PF01808 AICARFT/IMPCHase bienzyme BI315_16060 PF02142 MGS-like domain BI315_16065 PF01066 CDP-alcohol phosphatidyltransferase BI315_16070 PF12147 Putative methyltransferase BI315_16070 PF12146 Serine aminopeptidase, S33 BI315_16075 PF00782 Dual specificity phosphatase, catalytic domain BI315_16105 PF02954 Bacterial regulatory protein, Fis family BI315_16115 PF01381 Helix-turn-helix BI315_16145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI315_16145 PF00289 Biotin carboxylase, N-terminal domain BI315_16145 PF02785 Biotin carboxylase C-terminal domain BI315_16155 PF00364 Biotin-requiring enzyme BI315_16160 PF01220 Dehydroquinase class II BI315_16165 PF02683 Cytochrome C biogenesis protein transmembrane region BI315_16165 PF11412 Disulphide bond corrector protein DsbC BI315_16170 PF03091 CutA1 divalent ion tolerance protein BI315_16185 PF01852 START domain BI315_16200 PF00106 short chain dehydrogenase BI315_16205 PF04231 Endonuclease I BI315_16215 PF00166 Chaperonin 10 Kd subunit BI315_16220 PF00118 TCP-1/cpn60 chaperonin family BI315_16230 PF07715 TonB-dependent Receptor Plug Domain BI315_16230 PF00593 TonB dependent receptor BI315_16235 PF00793 DAHP synthetase I family BI315_16250 PF08450 SMP-30/Gluconolactonase/LRE-like region BI315_16260 PF03710 Glutamate-ammonia ligase adenylyltransferase BI315_16260 PF08335 GlnD PII-uridylyltransferase BI315_16265 PF02592 Putative vitamin uptake transporter BI315_16285 PF00881 Nitroreductase family BI315_16290 PF04264 YceI-like domain BI315_16315 PF16957 Malonate decarboxylase, alpha subunit, transporter BI315_16320 PF06857 Malonate decarboxylase delta subunit (MdcD) BI315_16325 PF01039 Carboxyl transferase domain BI315_16335 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BI315_16340 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BI315_16345 PF00698 Acyl transferase domain BI315_16355 PF00392 Bacterial regulatory proteins, gntR family BI315_16355 PF07729 FCD domain BI315_16360 PF13419 Haloacid dehalogenase-like hydrolase BI315_16390 PF07745 Glycosyl hydrolase family 53 BI315_16395 PF00456 Transketolase, thiamine diphosphate binding domain BI315_16395 PF17831 Pyruvate dehydrogenase E1 component middle domain BI315_16400 PF00145 C-5 cytosine-specific DNA methylase BI315_16405 PF13333 Integrase core domain BI315_16405 PF13276 HTH-like domain BI315_16405 PF00665 Integrase core domain BI315_16415 PF00106 short chain dehydrogenase BI315_16430 PF00106 short chain dehydrogenase BI315_16440 PF13409 Glutathione S-transferase, N-terminal domain BI315_16465 PF12823 Domain of unknown function (DUF3817) BI315_16465 PF03176 MMPL family BI315_16475 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI315_16475 PF00326 Prolyl oligopeptidase family BI315_16480 PF07759 Protein of unknown function (DUF1615) BI315_16490 PF00990 Diguanylate cyclase, GGDEF domain BI315_16490 PF05230 MASE2 domain BI315_16515 PF00892 EamA-like transporter family BI315_16520 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI315_16530 PF00324 Amino acid permease BI315_16540 PF01544 CorA-like Mg2+ transporter protein BI315_16550 PF01204 Trehalase BI315_16565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI315_16565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI315_16595 PF03707 Bacterial signalling protein N terminal repeat BI315_16595 PF00990 Diguanylate cyclase, GGDEF domain BI315_16595 PF00563 EAL domain BI315_16600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_16600 PF02203 Tar ligand binding domain homologue BI315_16600 PF00672 HAMP domain BI315_16605 PF00553 Cellulose binding domain BI315_16605 PF00150 Cellulase (glycosyl hydrolase family 5) BI315_16610 PF00916 Sulfate permease family BI315_16610 PF01740 STAS domain BI315_16620 PF08448 PAS fold BI315_16620 PF00990 Diguanylate cyclase, GGDEF domain BI315_16640 PF13632 Glycosyl transferase family group 2 BI315_16650 PF06580 Histidine kinase BI315_16650 PF07694 5TMR of 5TMR-LYT BI315_16655 PF00072 Response regulator receiver domain BI315_16655 PF04397 LytTr DNA-binding domain BI315_16660 PF03900 Porphobilinogen deaminase, C-terminal domain BI315_16660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BI315_16690 PF00326 Prolyl oligopeptidase family BI315_16690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI315_16700 PF00155 Aminotransferase class I and II BI315_16710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI315_16710 PF00326 Prolyl oligopeptidase family BI315_16715 PF04304 Protein of unknown function (DUF454) BI315_16725 PF01678 Diaminopimelate epimerase BI315_16735 PF00589 Phage integrase family BI315_16735 PF02899 Phage integrase, N-terminal SAM-like domain BI315_16740 PF00227 Proteasome subunit BI315_16745 PF07724 AAA domain (Cdc48 subfamily) BI315_16745 PF10431 C-terminal, D2-small domain, of ClpB protein BI315_16745 PF00004 ATPase family associated with various cellular activities (AAA) BI315_16755 PF13673 Acetyltransferase (GNAT) domain BI315_16760 PF13533 Biotin-lipoyl like BI315_16770 PF01209 ubiE/COQ5 methyltransferase family BI315_16775 PF03707 Bacterial signalling protein N terminal repeat BI315_16775 PF00990 Diguanylate cyclase, GGDEF domain BI315_16775 PF00563 EAL domain BI315_16780 PF01433 Peptidase family M1 domain BI315_16780 PF11838 ERAP1-like C-terminal domain BI315_16800 PF13360 PQQ-like domain BI315_16805 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI315_16820 PF00107 Zinc-binding dehydrogenase BI315_16820 PF08240 Alcohol dehydrogenase GroES-like domain BI315_16830 PF02954 Bacterial regulatory protein, Fis family BI315_16830 PF01590 GAF domain BI315_16830 PF00158 Sigma-54 interaction domain BI315_16835 PF00294 pfkB family carbohydrate kinase BI315_16845 PF04085 rod shape-determining protein MreC BI315_16855 PF03717 Penicillin-binding Protein dimerisation domain BI315_16855 PF00905 Penicillin binding protein transpeptidase domain BI315_16860 PF01098 Cell cycle protein BI315_16865 PF00295 Glycosyl hydrolases family 28 BI315_16870 PF13406 Transglycosylase SLT domain BI315_16875 PF05036 Sporulation related domain BI315_16875 PF03330 Lytic transglycolase BI315_16885 PF00768 D-alanyl-D-alanine carboxypeptidase BI315_16885 PF07943 Penicillin-binding protein 5, C-terminal domain BI315_16895 PF04359 Protein of unknown function (DUF493) BI315_16900 PF03099 Biotin/lipoate A/B protein ligase family BI315_16905 PF04055 Radical SAM superfamily BI315_16905 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BI315_16910 PF17804 Tail specific protease N-terminal domain BI315_16910 PF00595 PDZ domain BI315_16910 PF03572 Peptidase family S41 BI315_16910 PF11818 C-terminal domain of tail specific protease (DUF3340) BI315_16920 PF03466 LysR substrate binding domain BI315_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_16930 PF00293 NUDIX domain BI315_16930 PF01467 Cytidylyltransferase-like BI315_16965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI315_16965 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BI315_16970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI315_16970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI315_16975 PF04972 BON domain BI315_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_16980 PF00512 His Kinase A (phospho-acceptor) domain BI315_16980 PF08446 PAS fold BI315_16980 PF00360 Phytochrome region BI315_16980 PF01590 GAF domain BI315_16985 PF00072 Response regulator receiver domain BI315_16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_16990 PF00512 His Kinase A (phospho-acceptor) domain BI315_16995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI315_17000 PF00106 short chain dehydrogenase BI315_17045 PF00263 Bacterial type II and III secretion system protein BI315_17045 PF03958 Bacterial type II/III secretion system short domain BI315_17050 PF00437 Type II/IV secretion system protein BI315_17055 PF00482 Type II secretion system (T2SS), protein F BI315_17060 PF07963 Prokaryotic N-terminal methylation motif BI315_17060 PF08334 Type II secretion system (T2SS), protein G BI315_17065 PF12019 Type II transport protein GspH BI315_17065 PF07963 Prokaryotic N-terminal methylation motif BI315_17070 PF02501 Type II secretion system (T2SS), protein I BI315_17070 PF07963 Prokaryotic N-terminal methylation motif BI315_17075 PF07963 Prokaryotic N-terminal methylation motif BI315_17075 PF11612 Type II secretion system (T2SS), protein J BI315_17080 PF03934 Type II secretion system (T2SS), protein K BI315_17125 PF07690 Major Facilitator Superfamily BI315_17130 PF00356 Bacterial regulatory proteins, lacI family BI315_17135 PF01380 SIS domain BI315_17140 PF01979 Amidohydrolase family BI315_17150 PF01966 HD domain BI315_17150 PF01743 Poly A polymerase head domain BI315_17150 PF12627 Probable RNA and SrmB- binding site of polymerase A BI315_17155 PF05199 GMC oxidoreductase BI315_17155 PF00732 GMC oxidoreductase BI315_17160 PF00171 Aldehyde dehydrogenase family BI315_17165 PF02028 BCCT, betaine/carnitine/choline family transporter BI315_17180 PF01323 DSBA-like thioredoxin domain BI315_17190 PF00034 Cytochrome c BI315_17195 PF01926 50S ribosome-binding GTPase BI315_17200 PF10996 Beta-Casp domain BI315_17200 PF00753 Metallo-beta-lactamase superfamily BI315_17200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BI315_17215 PF04107 Glutamate-cysteine ligase family 2(GCS2) BI315_17220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_17220 PF00512 His Kinase A (phospho-acceptor) domain BI315_17220 PF00672 HAMP domain BI315_17225 PF00072 Response regulator receiver domain BI315_17225 PF00486 Transcriptional regulatory protein, C terminal BI315_17240 PF02583 Metal-sensitive transcriptional repressor BI315_17245 PF08240 Alcohol dehydrogenase GroES-like domain BI315_17245 PF00107 Zinc-binding dehydrogenase BI315_17250 PF04828 Glutathione-dependent formaldehyde-activating enzyme BI315_17255 PF00756 Putative esterase BI315_17265 PF00155 Aminotransferase class I and II BI315_17265 PF00392 Bacterial regulatory proteins, gntR family BI315_17270 PF02567 Phenazine biosynthesis-like protein BI315_17275 PF00892 EamA-like transporter family BI315_17285 PF00005 ABC transporter BI315_17285 PF12848 ABC transporter BI315_17295 PF00464 Serine hydroxymethyltransferase BI315_17300 PF03477 ATP cone domain BI315_17310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BI315_17310 PF01872 RibD C-terminal domain BI315_17320 PF00677 Lumazine binding domain BI315_17325 PF00925 GTP cyclohydrolase II BI315_17325 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BI315_17330 PF00885 6,7-dimethyl-8-ribityllumazine synthase BI315_17335 PF01029 NusB family BI315_17340 PF00586 AIR synthase related protein, N-terminal domain BI315_17340 PF02769 AIR synthase related protein, C-terminal domain BI315_17365 PF03814 Potassium-transporting ATPase A subunit BI315_17375 PF02669 K+-transporting ATPase, c chain BI315_17380 PF13493 Domain of unknown function (DUF4118) BI315_17380 PF13492 GAF domain BI315_17380 PF00512 His Kinase A (phospho-acceptor) domain BI315_17380 PF02702 Osmosensitive K+ channel His kinase sensor domain BI315_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_17385 PF00072 Response regulator receiver domain BI315_17385 PF00486 Transcriptional regulatory protein, C terminal BI315_17400 PF01565 FAD binding domain BI315_17400 PF02913 FAD linked oxidases, C-terminal domain BI315_17405 PF04307 LexA-binding, inner membrane-associated putative hydrolase BI315_17410 PF02021 Uncharacterised protein family UPF0102 BI315_17420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI315_17440 PF02381 MraZ protein, putative antitoxin-like BI315_17445 PF01795 MraW methylase family BI315_17450 PF04999 Cell division protein FtsL BI315_17455 PF00905 Penicillin binding protein transpeptidase domain BI315_17455 PF03717 Penicillin-binding Protein dimerisation domain BI315_17460 PF01225 Mur ligase family, catalytic domain BI315_17460 PF02875 Mur ligase family, glutamate ligase domain BI315_17460 PF08245 Mur ligase middle domain BI315_17465 PF08245 Mur ligase middle domain BI315_17465 PF02875 Mur ligase family, glutamate ligase domain BI315_17465 PF01225 Mur ligase family, catalytic domain BI315_17470 PF00953 Glycosyl transferase family 4 BI315_17475 PF01098 Cell cycle protein BI315_17480 PF03033 Glycosyltransferase family 28 N-terminal domain BI315_17480 PF04101 Glycosyltransferase family 28 C-terminal domain BI315_17485 PF01225 Mur ligase family, catalytic domain BI315_17485 PF08245 Mur ligase middle domain BI315_17485 PF02875 Mur ligase family, glutamate ligase domain BI315_17490 PF01820 D-ala D-ala ligase N-terminus BI315_17490 PF07478 D-ala D-ala ligase C-terminus BI315_17495 PF08478 POTRA domain, FtsQ-type BI315_17495 PF03799 Cell division protein FtsQ BI315_17500 PF02491 SHS2 domain inserted in FTSA BI315_17505 PF00091 Tubulin/FtsZ family, GTPase domain BI315_17505 PF12327 FtsZ family, C-terminal domain BI315_17510 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BI315_17520 PF01551 Peptidase family M23 BI315_17520 PF08525 Opacity-associated protein A N-terminal motif BI315_17520 PF01476 LysM domain BI315_17525 PF01043 SecA preprotein cross-linking domain BI315_17525 PF07516 SecA Wing and Scaffold domain BI315_17525 PF07517 SecA DEAD-like domain BI315_17525 PF02810 SEC-C motif BI315_17530 PF00293 NUDIX domain BI315_17540 PF02219 Methylenetetrahydrofolate reductase BI315_17555 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_17555 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_17555 PF14765 Polyketide synthase dehydratase BI315_17555 PF16197 Ketoacyl-synthetase C-terminal extension BI315_17555 PF00550 Phosphopantetheine attachment site BI315_17555 PF08659 KR domain BI315_17555 PF00107 Zinc-binding dehydrogenase BI315_17555 PF00698 Acyl transferase domain BI315_17555 PF08240 Alcohol dehydrogenase GroES-like domain BI315_17560 PF00082 Subtilase family BI315_17560 PF09286 Pro-kumamolisin, activation domain BI315_17580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI315_17585 PF00128 Alpha amylase, catalytic domain BI315_17620 PF13649 Methyltransferase domain BI315_17625 PF05221 S-adenosyl-L-homocysteine hydrolase BI315_17625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BI315_17640 PF00311 Phosphoenolpyruvate carboxylase BI315_17675 PF00328 Histidine phosphatase superfamily (branch 2) BI315_17685 PF02772 S-adenosylmethionine synthetase, central domain BI315_17685 PF02773 S-adenosylmethionine synthetase, C-terminal domain BI315_17685 PF00438 S-adenosylmethionine synthetase, N-terminal domain BI315_17695 PF13649 Methyltransferase domain BI315_17700 PF01207 Dihydrouridine synthase (Dus) BI315_17710 PF00294 pfkB family carbohydrate kinase BI315_17715 PF07670 Nucleoside recognition BI315_17715 PF07662 Na+ dependent nucleoside transporter C-terminus BI315_17715 PF01773 Na+ dependent nucleoside transporter N-terminus BI315_17725 PF00248 Aldo/keto reductase family BI315_17735 PF07715 TonB-dependent Receptor Plug Domain BI315_17735 PF00593 TonB dependent receptor BI315_17755 PF00528 Binding-protein-dependent transport system inner membrane component BI315_17760 PF00005 ABC transporter BI315_17770 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BI315_17780 PF00005 ABC transporter BI315_17785 PF13472 GDSL-like Lipase/Acylhydrolase family BI315_17790 PF00072 Response regulator receiver domain BI315_17790 PF00486 Transcriptional regulatory protein, C terminal BI315_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_17795 PF00512 His Kinase A (phospho-acceptor) domain BI315_17795 PF08521 Two-component sensor kinase N-terminal BI315_17810 PF01219 Prokaryotic diacylglycerol kinase BI315_17830 PF01790 Prolipoprotein diacylglyceryl transferase BI315_17835 PF00303 Thymidylate synthase BI315_17845 PF00186 Dihydrofolate reductase BI315_17850 PF00158 Sigma-54 interaction domain BI315_17855 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BI315_17855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_17860 PF00005 ABC transporter BI315_17865 PF00528 Binding-protein-dependent transport system inner membrane component BI315_17875 PF00296 Luciferase-like monooxygenase BI315_17880 PF03358 NADPH-dependent FMN reductase BI315_17900 PF00296 Luciferase-like monooxygenase BI315_17905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BI315_17910 PF00528 Binding-protein-dependent transport system inner membrane component BI315_17920 PF00005 ABC transporter BI315_17920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BI315_17925 PF00149 Calcineurin-like phosphoesterase BI315_17930 PF04379 ApaG domain BI315_17935 PF00398 Ribosomal RNA adenine dimethylase BI315_17940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BI315_17945 PF00639 PPIC-type PPIASE domain BI315_17945 PF09312 SurA N-terminal domain BI315_17950 PF04453 LPS transport system D BI315_17950 PF03968 OstA-like protein BI315_17965 PF00850 Histone deacetylase domain BI315_17970 PF01923 Cobalamin adenosyltransferase BI315_17985 PF01494 FAD binding domain BI315_17990 PF01494 FAD binding domain BI315_18010 PF07729 FCD domain BI315_18010 PF00392 Bacterial regulatory proteins, gntR family BI315_18015 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI315_18020 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BI315_18020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI315_18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_18025 PF03466 LysR substrate binding domain BI315_18030 PF13193 AMP-binding enzyme C-terminal domain BI315_18030 PF00501 AMP-binding enzyme BI315_18035 PF00171 Aldehyde dehydrogenase family BI315_18040 PF00378 Enoyl-CoA hydratase/isomerase BI315_18060 PF08450 SMP-30/Gluconolactonase/LRE-like region BI315_18065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI315_18065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI315_18075 PF18125 RlmM ferredoxin-like domain BI315_18075 PF01728 FtsJ-like methyltransferase BI315_18100 PF00892 EamA-like transporter family BI315_18110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BI315_18110 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI315_18125 PF00990 Diguanylate cyclase, GGDEF domain BI315_18125 PF00072 Response regulator receiver domain BI315_18130 PF00512 His Kinase A (phospho-acceptor) domain BI315_18130 PF00672 HAMP domain BI315_18130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_18130 PF00072 Response regulator receiver domain BI315_18130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI315_18130 PF01627 Hpt domain BI315_18135 PF00072 Response regulator receiver domain BI315_18135 PF00196 Bacterial regulatory proteins, luxR family BI315_18145 PF01625 Peptide methionine sulfoxide reductase BI315_18155 PF00923 Transaldolase/Fructose-6-phosphate aldolase BI315_18160 PF01272 Transcription elongation factor, GreA/GreB, C-term BI315_18160 PF14760 Rnk N-terminus BI315_18170 PF03466 LysR substrate binding domain BI315_18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_18175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_18175 PF13192 Thioredoxin domain BI315_18180 PF00578 AhpC/TSA family BI315_18180 PF10417 C-terminal domain of 1-Cys peroxiredoxin BI315_18185 PF17827 PrmC N-terminal domain BI315_18185 PF05175 Methyltransferase small domain BI315_18190 PF00561 alpha/beta hydrolase fold BI315_18200 PF00293 NUDIX domain BI315_18205 PF01612 3'-5' exonuclease BI315_18205 PF00476 DNA polymerase family A BI315_18205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI315_18205 PF01367 5'-3' exonuclease, C-terminal SAM fold BI315_18235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BI315_18235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BI315_18235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI315_18260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI315_18265 PF02233 NAD(P) transhydrogenase beta subunit BI315_18280 PF01063 Amino-transferase class IV BI315_18285 PF04151 Bacterial pre-peptidase C-terminal domain BI315_18285 PF00082 Subtilase family BI315_18290 PF04151 Bacterial pre-peptidase C-terminal domain BI315_18290 PF00082 Subtilase family BI315_18295 PF04151 Bacterial pre-peptidase C-terminal domain BI315_18295 PF00082 Subtilase family BI315_18300 PF04073 Aminoacyl-tRNA editing domain BI315_18320 PF03358 NADPH-dependent FMN reductase BI315_18325 PF03631 Virulence factor BrkB BI315_18330 PF08534 Redoxin BI315_18345 PF03976 Polyphosphate kinase 2 (PPK2) BI315_18350 PF00994 Probable molybdopterin binding domain BI315_18360 PF03462 PCRF domain BI315_18360 PF00472 RF-1 domain BI315_18375 PF03550 Outer membrane lipoprotein LolB BI315_18380 PF00288 GHMP kinases N terminal domain BI315_18380 PF08544 GHMP kinases C terminal BI315_18390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BI315_18390 PF14572 Phosphoribosyl synthetase-associated domain BI315_18395 PF01386 Ribosomal L25p family BI315_18395 PF14693 Ribosomal protein TL5, C-terminal domain BI315_18400 PF01195 Peptidyl-tRNA hydrolase BI315_18405 PF06071 Protein of unknown function (DUF933) BI315_18405 PF01926 50S ribosome-binding GTPase BI315_18425 PF03144 Elongation factor Tu domain 2 BI315_18425 PF00009 Elongation factor Tu GTP binding domain BI315_18425 PF03143 Elongation factor Tu C-terminal domain BI315_18435 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BI315_18440 PF00467 KOW motif BI315_18440 PF02357 Transcription termination factor nusG BI315_18445 PF03946 Ribosomal protein L11, N-terminal domain BI315_18445 PF00298 Ribosomal protein L11, RNA binding domain BI315_18450 PF00687 Ribosomal protein L1p/L10e family BI315_18455 PF00466 Ribosomal protein L10 BI315_18460 PF00542 Ribosomal protein L7/L12 C-terminal domain BI315_18460 PF16320 Ribosomal protein L7/L12 dimerisation domain BI315_18465 PF04561 RNA polymerase Rpb2, domain 2 BI315_18465 PF04565 RNA polymerase Rpb2, domain 3 BI315_18465 PF10385 RNA polymerase beta subunit external 1 domain BI315_18465 PF04563 RNA polymerase beta subunit BI315_18465 PF00562 RNA polymerase Rpb2, domain 6 BI315_18465 PF04560 RNA polymerase Rpb2, domain 7 BI315_18470 PF00623 RNA polymerase Rpb1, domain 2 BI315_18470 PF04997 RNA polymerase Rpb1, domain 1 BI315_18470 PF04983 RNA polymerase Rpb1, domain 3 BI315_18470 PF05000 RNA polymerase Rpb1, domain 4 BI315_18470 PF04998 RNA polymerase Rpb1, domain 5 BI315_18475 PF00164 Ribosomal protein S12/S23 BI315_18480 PF00177 Ribosomal protein S7p/S5e BI315_18485 PF00679 Elongation factor G C-terminus BI315_18485 PF14492 Elongation Factor G, domain II BI315_18485 PF03764 Elongation factor G, domain IV BI315_18485 PF00009 Elongation factor Tu GTP binding domain BI315_18485 PF03144 Elongation factor Tu domain 2 BI315_18490 PF00009 Elongation factor Tu GTP binding domain BI315_18490 PF03144 Elongation factor Tu domain 2 BI315_18490 PF03143 Elongation factor Tu C-terminal domain BI315_18495 PF00338 Ribosomal protein S10p/S20e BI315_18500 PF00297 Ribosomal protein L3 BI315_18505 PF00573 Ribosomal protein L4/L1 family BI315_18510 PF00276 Ribosomal protein L23 BI315_18515 PF03947 Ribosomal Proteins L2, C-terminal domain BI315_18515 PF00181 Ribosomal Proteins L2, RNA binding domain BI315_18520 PF00203 Ribosomal protein S19 BI315_18525 PF00237 Ribosomal protein L22p/L17e BI315_18530 PF07650 KH domain BI315_18530 PF00189 Ribosomal protein S3, C-terminal domain BI315_18535 PF00252 Ribosomal protein L16p/L10e BI315_18540 PF00831 Ribosomal L29 protein BI315_18545 PF00366 Ribosomal protein S17 BI315_18550 PF00238 Ribosomal protein L14p/L23e BI315_18555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BI315_18555 PF00467 KOW motif BI315_18560 PF00281 Ribosomal protein L5 BI315_18560 PF00673 ribosomal L5P family C-terminus BI315_18565 PF00253 Ribosomal protein S14p/S29e BI315_18570 PF00410 Ribosomal protein S8 BI315_18575 PF00347 Ribosomal protein L6 BI315_18580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BI315_18585 PF00333 Ribosomal protein S5, N-terminal domain BI315_18585 PF03719 Ribosomal protein S5, C-terminal domain BI315_18590 PF00327 Ribosomal protein L30p/L7e BI315_18595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BI315_18600 PF00344 SecY translocase BI315_18605 PF00416 Ribosomal protein S13/S18 BI315_18610 PF00411 Ribosomal protein S11 BI315_18615 PF01479 S4 domain BI315_18615 PF00163 Ribosomal protein S4/S9 N-terminal domain BI315_18620 PF01000 RNA polymerase Rpb3/RpoA insert domain BI315_18620 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BI315_18620 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BI315_18625 PF01196 Ribosomal protein L17 BI315_18630 PF02600 Disulfide bond formation protein DsbB BI315_18650 PF01474 Class-II DAHP synthetase family BI315_18660 PF01425 Amidase BI315_18675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI315_18680 PF00056 lactate/malate dehydrogenase, NAD binding domain BI315_18680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BI315_18685 PF00043 Glutathione S-transferase, C-terminal domain BI315_18685 PF02798 Glutathione S-transferase, N-terminal domain BI315_18700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI315_18700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_18705 PF08240 Alcohol dehydrogenase GroES-like domain BI315_18705 PF00107 Zinc-binding dehydrogenase BI315_18715 PF00691 OmpA family BI315_18715 PF05736 OprF membrane domain BI315_18725 PF00849 RNA pseudouridylate synthase BI315_18735 PF00155 Aminotransferase class I and II BI315_18745 PF00528 Binding-protein-dependent transport system inner membrane component BI315_18750 PF00528 Binding-protein-dependent transport system inner membrane component BI315_18755 PF12857 TOBE-like domain BI315_18755 PF00005 ABC transporter BI315_18755 PF17850 CysA C-terminal regulatory domain BI315_18765 PF00107 Zinc-binding dehydrogenase BI315_18765 PF08240 Alcohol dehydrogenase GroES-like domain BI315_18780 PF04185 Phosphoesterase family BI315_18780 PF05506 Domain of unknown function (DUF756) BI315_18785 PF10459 Peptidase S46 BI315_18790 PF10459 Peptidase S46 BI315_18795 PF00300 Histidine phosphatase superfamily (branch 1) BI315_18800 PF08245 Mur ligase middle domain BI315_18800 PF02875 Mur ligase family, glutamate ligase domain BI315_18815 PF00156 Phosphoribosyl transferase domain BI315_18820 PF04305 Protein of unknown function (DUF455) BI315_18840 PF00149 Calcineurin-like phosphoesterase BI315_18845 PF01569 PAP2 superfamily BI315_18850 PF00534 Glycosyl transferases group 1 BI315_18850 PF13439 Glycosyltransferase Family 4 BI315_18855 PF02541 Ppx/GppA phosphatase family BI315_18860 PF02503 Polyphosphate kinase middle domain BI315_18860 PF13090 Polyphosphate kinase C-terminal domain 2 BI315_18860 PF13089 Polyphosphate kinase N-terminal domain BI315_18860 PF17941 Polyphosphate kinase C-terminal domain 1 BI315_18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_18865 PF00512 His Kinase A (phospho-acceptor) domain BI315_18865 PF00989 PAS fold BI315_18865 PF11808 Phosphate regulon sensor protein PhoR BI315_18870 PF00486 Transcriptional regulatory protein, C terminal BI315_18870 PF00072 Response regulator receiver domain BI315_18875 PF13181 Tetratricopeptide repeat BI315_18875 PF01435 Peptidase family M48 BI315_18880 PF00462 Glutaredoxin BI315_18890 PF00180 Isocitrate/isopropylmalate dehydrogenase BI315_18920 PF13276 HTH-like domain BI315_18920 PF13333 Integrase core domain BI315_18920 PF00665 Integrase core domain BI315_19025 PF13276 HTH-like domain BI315_19025 PF00665 Integrase core domain BI315_19025 PF13333 Integrase core domain BI315_19050 PF05698 Bacterial trigger factor protein (TF) C-terminus BI315_19050 PF05697 Bacterial trigger factor protein (TF) BI315_19055 PF00574 Clp protease BI315_19060 PF10431 C-terminal, D2-small domain, of ClpB protein BI315_19060 PF07724 AAA domain (Cdc48 subfamily) BI315_19060 PF06689 ClpX C4-type zinc finger BI315_19065 PF02190 ATP-dependent protease La (LON) substrate-binding domain BI315_19065 PF05362 Lon protease (S16) C-terminal proteolytic domain BI315_19065 PF00004 ATPase family associated with various cellular activities (AAA) BI315_19070 PF00216 Bacterial DNA-binding protein BI315_19090 PF01476 LysM domain BI315_19090 PF05257 CHAP domain BI315_19095 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI315_19095 PF00753 Metallo-beta-lactamase superfamily BI315_19105 PF00075 RNase H BI315_19110 PF00929 Exonuclease BI315_19130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BI315_19140 PF12706 Beta-lactamase superfamily domain BI315_19140 PF00753 Metallo-beta-lactamase superfamily BI315_19145 PF06463 Molybdenum Cofactor Synthesis C BI315_19145 PF04055 Radical SAM superfamily BI315_19155 PF01967 MoaC family BI315_19160 PF02597 ThiS family BI315_19165 PF02391 MoaE protein BI315_19190 PF01527 Transposase BI315_19225 PF12170 DNA polymerase III tau subunit V interacting with alpha BI315_19225 PF12169 DNA polymerase III subunits gamma and tau domain III BI315_19225 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BI315_19230 PF02575 YbaB/EbfC DNA-binding family BI315_19235 PF13662 Toprim domain BI315_19235 PF02132 RecR protein BI315_19240 PF01230 HIT domain BI315_19250 PF01841 Transglutaminase-like superfamily BI315_19250 PF11992 Domain of unknown function (DUF3488) BI315_19250 PF13559 Domain of unknown function (DUF4129) BI315_19260 PF17863 AAA lid domain BI315_19260 PF07726 ATPase family associated with various cellular activities (AAA) BI315_19285 PF02545 Maf-like protein BI315_19290 PF02620 Large ribosomal RNA subunit accumulation protein YceD BI315_19295 PF01783 Ribosomal L32p protein family BI315_19300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI315_19300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI315_19310 PF00698 Acyl transferase domain BI315_19320 PF00550 Phosphopantetheine attachment site BI315_19325 PF00109 Beta-ketoacyl synthase, N-terminal domain BI315_19325 PF02801 Beta-ketoacyl synthase, C-terminal domain BI315_19330 PF00425 chorismate binding enzyme BI315_19330 PF04715 Anthranilate synthase component I, N terminal region BI315_19335 PF02618 YceG-like family BI315_19340 PF09115 DNA polymerase III, delta subunit, C terminal BI315_19360 PF02954 Bacterial regulatory protein, Fis family BI315_19360 PF06506 Propionate catabolism activator BI315_19360 PF00158 Sigma-54 interaction domain BI315_19370 PF00285 Citrate synthase, C-terminal domain BI315_19375 PF00694 Aconitase C-terminal domain BI315_19375 PF00330 Aconitase family (aconitate hydratase) BI315_19380 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BI315_19395 PF00593 TonB dependent receptor BI315_19395 PF07715 TonB-dependent Receptor Plug Domain BI315_19410 PF01835 MG2 domain BI315_19410 PF07703 Alpha-2-macroglobulin bait region domain BI315_19410 PF00207 Alpha-2-macroglobulin family BI315_19410 PF17962 Bacterial macroglobulin domain 6 BI315_19410 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BI315_19410 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BI315_19410 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BI315_19410 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BI315_19430 PF06832 Penicillin-Binding Protein C-terminus Family BI315_19430 PF00912 Transglycosylase BI315_19430 PF00905 Penicillin binding protein transpeptidase domain BI315_19440 PF08534 Redoxin BI315_19450 PF00226 DnaJ domain BI315_19450 PF01556 DnaJ C terminal domain BI315_19455 PF00072 Response regulator receiver domain BI315_19460 PF01145 SPFH domain / Band 7 family BI315_19460 PF12221 Bacterial membrane protein N terminal BI315_19465 PF01145 SPFH domain / Band 7 family BI315_19480 PF00709 Adenylosuccinate synthetase BI315_19485 PF01433 Peptidase family M1 domain BI315_19485 PF11838 ERAP1-like C-terminal domain BI315_19495 PF00440 Bacterial regulatory proteins, tetR family BI315_19540 PF11867 Domain of unknown function (DUF3387) BI315_19540 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BI315_19540 PF18766 SWI2/SNF2 ATPase BI315_19570 PF00300 Histidine phosphatase superfamily (branch 1) BI315_19570 PF13456 Reverse transcriptase-like BI315_19575 PF01256 Carbohydrate kinase BI315_19585 PF00723 Glycosyl hydrolases family 15 BI315_19600 PF07971 Glycosyl hydrolase family 92 BI315_19600 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI315_19620 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_19640 PF17755 UvrA DNA-binding domain BI315_19645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI315_19645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI315_19650 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI315_19650 PF00941 FAD binding domain in molybdopterin dehydrogenase BI315_19655 PF01799 [2Fe-2S] binding domain BI315_19655 PF00111 2Fe-2S iron-sulfur cluster binding domain BI315_19690 PF00717 Peptidase S24-like BI315_19690 PF01726 LexA DNA binding domain BI315_19705 PF14579 Helix-hairpin-helix motif BI315_19705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI315_19705 PF02811 PHP domain BI315_19705 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI315_19715 PF00326 Prolyl oligopeptidase family BI315_19725 PF03169 OPT oligopeptide transporter protein BI315_19740 PF07676 WD40-like Beta Propeller Repeat BI315_19740 PF00326 Prolyl oligopeptidase family BI315_19740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI315_19760 PF12833 Helix-turn-helix domain BI315_19760 PF02311 AraC-like ligand binding domain BI315_19775 PF00199 Catalase BI315_19775 PF06628 Catalase-related immune-responsive BI315_19775 PF18011 C-terminal domain found in long catalases BI315_19780 PF00248 Aldo/keto reductase family BI315_19785 PF00135 Carboxylesterase family BI315_19790 PF02347 Glycine cleavage system P-protein BI315_19795 PF07690 Major Facilitator Superfamily BI315_19810 PF08019 Phosphoethanolamine transferase EptA/EptB BI315_19810 PF00884 Sulfatase BI315_19825 PF00072 Response regulator receiver domain BI315_19825 PF00486 Transcriptional regulatory protein, C terminal BI315_19830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_19830 PF08521 Two-component sensor kinase N-terminal BI315_19830 PF00512 His Kinase A (phospho-acceptor) domain BI315_19840 PF03776 Septum formation topological specificity factor MinE BI315_19845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI315_19850 PF05209 Septum formation inhibitor MinC, N-terminal domain BI315_19850 PF03775 Septum formation inhibitor MinC, C-terminal domain BI315_19865 PF07730 Histidine kinase BI315_19870 PF00072 Response regulator receiver domain BI315_19870 PF00196 Bacterial regulatory proteins, luxR family BI315_19885 PF00730 HhH-GPD superfamily base excision DNA repair protein BI315_19915 PF02222 ATP-grasp domain BI315_19925 PF04376 Arginine-tRNA-protein transferase, N terminus BI315_19925 PF04377 Arginine-tRNA-protein transferase, C terminus BI315_19950 PF00378 Enoyl-CoA hydratase/isomerase BI315_19965 PF17760 UvrA interaction domain BI315_19965 PF17755 UvrA DNA-binding domain BI315_19965 PF00005 ABC transporter BI315_19970 PF00829 Ribosomal prokaryotic L21 protein BI315_19975 PF01016 Ribosomal L27 protein BI315_19980 PF01926 50S ribosome-binding GTPase BI315_19980 PF01018 GTP1/OBG BI315_19985 PF01649 Ribosomal protein S20 BI315_19990 PF03023 Lipid II flippase MurJ BI315_19995 PF06574 FAD synthetase BI315_19995 PF01687 Riboflavin kinase BI315_20000 PF00133 tRNA synthetases class I (I, L, M and V) BI315_20000 PF06827 Zinc finger found in FPG and IleRS BI315_20000 PF08264 Anticodon-binding domain of tRNA BI315_20005 PF01252 Signal peptidase (SPase) II BI315_20010 PF02401 LytB protein BI315_20025 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI315_20030 PF00510 Cytochrome c oxidase subunit III BI315_20035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BI315_20045 PF18073 Rubredoxin metal binding domain BI315_20050 PF05656 Protein of unknown function (DUF805) BI315_20060 PF12833 Helix-turn-helix domain BI315_20065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20065 PF00183 Hsp90 protein BI315_20080 PF01740 STAS domain BI315_20080 PF08678 Rsbr N terminal BI315_20085 PF01740 STAS domain BI315_20090 PF13581 Histidine kinase-like ATPase domain BI315_20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20100 PF00672 HAMP domain BI315_20100 PF00072 Response regulator receiver domain BI315_20100 PF00512 His Kinase A (phospho-acceptor) domain BI315_20100 PF01627 Hpt domain BI315_20100 PF17149 Periplasmic sensor domain found in signal transduction proteins BI315_20105 PF00512 His Kinase A (phospho-acceptor) domain BI315_20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20105 PF00072 Response regulator receiver domain BI315_20105 PF08448 PAS fold BI315_20105 PF13188 PAS domain BI315_20110 PF04616 Glycosyl hydrolases family 43 BI315_20110 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI315_20115 PF00593 TonB dependent receptor BI315_20115 PF07715 TonB-dependent Receptor Plug Domain BI315_20120 PF00085 Thioredoxin BI315_20125 PF07237 Protein of unknown function (DUF1428) BI315_20130 PF13492 GAF domain BI315_20130 PF00512 His Kinase A (phospho-acceptor) domain BI315_20130 PF02702 Osmosensitive K+ channel His kinase sensor domain BI315_20130 PF13493 Domain of unknown function (DUF4118) BI315_20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20135 PF01339 CheB methylesterase BI315_20140 PF03705 CheR methyltransferase, all-alpha domain BI315_20140 PF01739 CheR methyltransferase, SAM binding domain BI315_20145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI315_20145 PF00512 His Kinase A (phospho-acceptor) domain BI315_20145 PF00672 HAMP domain BI315_20145 PF00072 Response regulator receiver domain BI315_20145 PF01627 Hpt domain BI315_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20150 PF13426 PAS domain BI315_20150 PF00072 Response regulator receiver domain BI315_20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_20155 PF00072 Response regulator receiver domain BI315_20160 PF00722 Glycosyl hydrolases family 16 BI315_20165 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BI315_20170 PF01263 Aldose 1-epimerase BI315_20175 PF01578 Cytochrome C assembly protein BI315_20180 PF02881 SRP54-type protein, helical bundle domain BI315_20180 PF00448 SRP54-type protein, GTPase domain BI315_20180 PF02978 Signal peptide binding domain BI315_20185 PF03060 Nitronate monooxygenase BI315_20190 PF01063 Amino-transferase class IV BI315_20195 PF00886 Ribosomal protein S16 BI315_20200 PF05239 PRC-barrel domain BI315_20200 PF01782 RimM N-terminal domain BI315_20205 PF01746 tRNA (Guanine-1)-methyltransferase BI315_20210 PF01245 Ribosomal protein L19 BI315_20230 PF01479 S4 domain BI315_20235 PF00141 Peroxidase BI315_20245 PF05188 MutS domain II BI315_20245 PF05190 MutS family domain IV BI315_20245 PF01624 MutS domain I BI315_20245 PF05192 MutS domain III BI315_20245 PF00488 MutS domain V BI315_20265 PF03527 RHS protein BI315_20265 PF05593 RHS Repeat BI315_20290 PF00703 Glycosyl hydrolases family 2 BI315_20290 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI315_20290 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI315_20290 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI315_20290 PF16355 Domain of unknown function (DUF4982) BI315_20295 PF07745 Glycosyl hydrolase family 53 BI315_20305 PF01381 Helix-turn-helix BI315_20305 PF06114 IrrE N-terminal-like domain BI315_20305 PF09856 Predicted transcriptional regulator (DUF2083) BI315_20310 PF00171 Aldehyde dehydrogenase family BI315_20315 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_20315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_20315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_20320 PF00378 Enoyl-CoA hydratase/isomerase BI315_20325 PF00378 Enoyl-CoA hydratase/isomerase BI315_20325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI315_20325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI315_20330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI315_20330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI315_20335 PF01545 Cation efflux family BI315_20340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI315_20340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI315_20340 PF00378 Enoyl-CoA hydratase/isomerase BI315_20345 PF04542 Sigma-70 region 2 BI315_20345 PF08281 Sigma-70, region 4 BI315_20355 PF13180 PDZ domain BI315_20360 PF03144 Elongation factor Tu domain 2 BI315_20360 PF00679 Elongation factor G C-terminus BI315_20360 PF00009 Elongation factor Tu GTP binding domain BI315_20360 PF06421 GTP-binding protein LepA C-terminus BI315_20365 PF10502 Signal peptidase, peptidase S26 BI315_20375 PF14622 Ribonuclease-III-like BI315_20375 PF00035 Double-stranded RNA binding motif BI315_20380 PF07650 KH domain BI315_20380 PF01926 50S ribosome-binding GTPase BI315_20385 PF02565 Recombination protein O C terminal BI315_20385 PF11967 Recombination protein O N terminal BI315_20395 PF05958 tRNA (Uracil-5-)-methyltransferase BI315_20405 PF01323 DSBA-like thioredoxin domain BI315_20410 PF01593 Flavin containing amine oxidoreductase BI315_20415 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BI315_20420 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_20430 PF01048 Phosphorylase superfamily BI315_20435 PF00313 'Cold-shock' DNA-binding domain BI315_20440 PF01494 FAD binding domain BI315_20450 PF00271 Helicase conserved C-terminal domain BI315_20450 PF00270 DEAD/DEAH box helicase BI315_20450 PF08494 DEAD/H associated BI315_20455 PF04675 DNA ligase N terminus BI315_20455 PF01068 ATP dependent DNA ligase domain BI315_20455 PF04679 ATP dependent DNA ligase C terminal region BI315_20465 PF04679 ATP dependent DNA ligase C terminal region BI315_20465 PF04675 DNA ligase N terminus BI315_20465 PF01068 ATP dependent DNA ligase domain BI315_20480 PF00990 Diguanylate cyclase, GGDEF domain BI315_20480 PF00072 Response regulator receiver domain BI315_20500 PF00108 Thiolase, N-terminal domain BI315_20500 PF02803 Thiolase, C-terminal domain BI315_20505 PF03797 Autotransporter beta-domain BI315_20505 PF12951 Passenger-associated-transport-repeat BI315_20505 PF00082 Subtilase family BI315_20510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BI315_20510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BI315_20525 PF01863 Protein of unknown function DUF45 BI315_20530 PF07043 Protein of unknown function (DUF1328) BI315_20540 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI315_20560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI315_20570 PF03831 PhnA domain BI315_20570 PF08274 PhnA Zinc-Ribbon BI315_20580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI315_20585 PF07690 Major Facilitator Superfamily BI315_20620 PF09924 Uncharacterised conserved protein (DUF2156) BI315_20620 PF03706 Lysylphosphatidylglycerol synthase TM region BI315_20630 PF01042 Endoribonuclease L-PSP BI315_20675 PF04545 Sigma-70, region 4 BI315_20675 PF04542 Sigma-70 region 2 BI315_20695 PF04060 Putative Fe-S cluster BI315_20705 PF01588 Putative tRNA binding domain BI315_20705 PF09334 tRNA synthetases class I (M) BI315_20720 PF13732 Domain of unknown function (DUF4162) BI315_20720 PF00005 ABC transporter BI315_20725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI315_20730 PF00324 Amino acid permease BI315_20735 PF02574 Homocysteine S-methyltransferase BI315_20745 PF02592 Putative vitamin uptake transporter BI315_20765 PF03551 Transcriptional regulator PadR-like family BI315_20800 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BI315_20805 PF01336 OB-fold nucleic acid binding domain BI315_20805 PF02811 PHP domain BI315_20805 PF14579 Helix-hairpin-helix motif BI315_20805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI315_20805 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI315_20810 PF01351 Ribonuclease HII BI315_20815 PF02684 Lipid-A-disaccharide synthetase BI315_20820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BI315_20820 PF00132 Bacterial transferase hexapeptide (six repeats) BI315_20825 PF07977 FabA-like domain BI315_20830 PF00132 Bacterial transferase hexapeptide (six repeats) BI315_20830 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BI315_20840 PF01103 Surface antigen BI315_20840 PF07244 Surface antigen variable number repeat BI315_20845 PF17820 PDZ domain BI315_20845 PF02163 Peptidase family M50 BI315_20850 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BI315_20850 PF13288 DXP reductoisomerase C-terminal domain BI315_20850 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BI315_20860 PF01255 Putative undecaprenyl diphosphate synthase BI315_20865 PF01765 Ribosome recycling factor BI315_20870 PF00696 Amino acid kinase family BI315_20875 PF00990 Diguanylate cyclase, GGDEF domain BI315_20875 PF00072 Response regulator receiver domain BI315_20880 PF00889 Elongation factor TS BI315_20885 PF00318 Ribosomal protein S2 BI315_20920 PF00557 Metallopeptidase family M24 BI315_20925 PF08335 GlnD PII-uridylyltransferase BI315_20925 PF01966 HD domain BI315_20925 PF01909 Nucleotidyltransferase domain BI315_20930 PF00132 Bacterial transferase hexapeptide (six repeats) BI315_20930 PF14602 Hexapeptide repeat of succinyl-transferase BI315_20930 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BI315_20935 PF03960 ArsC family BI315_20940 PF01546 Peptidase family M20/M25/M40 BI315_20940 PF07687 Peptidase dimerisation domain BI315_20945 PF00733 Asparagine synthase BI315_20945 PF13537 Glutamine amidotransferase domain BI315_20955 PF07715 TonB-dependent Receptor Plug Domain BI315_20955 PF00593 TonB dependent receptor BI315_20965 PF01804 Penicillin amidase BI315_20970 PF00210 Ferritin-like domain BI315_20975 PF05724 Thiopurine S-methyltransferase (TPMT) BI315_20985 PF03989 DNA gyrase C-terminal domain, beta-propeller BI315_20985 PF00521 DNA gyrase/topoisomerase IV, subunit A BI315_21000 PF02321 Outer membrane efflux protein BI315_21005 PF00529 HlyD membrane-fusion protein of T1SS BI315_21005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_21010 PF07690 Major Facilitator Superfamily BI315_21020 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_21020 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI315_21020 PF14310 Fibronectin type III-like domain BI315_21030 PF00854 POT family BI315_21055 PF12802 MarR family BI315_21060 PF01432 Peptidase family M3 BI315_21070 PF00255 Glutathione peroxidase BI315_21075 PF00175 Oxidoreductase NAD-binding domain BI315_21075 PF00970 Oxidoreductase FAD-binding domain BI315_21080 PF00005 ABC transporter BI315_21085 PF05683 Fumarase C-terminus BI315_21085 PF05681 Fumarate hydratase (Fumerase) BI315_21095 PF00484 Carbonic anhydrase BI315_21100 PF02253 Phospholipase A1 BI315_21110 PF00313 'Cold-shock' DNA-binding domain BI315_21125 PF00899 ThiF family BI315_21145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_21145 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_21145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_21155 PF02798 Glutathione S-transferase, N-terminal domain BI315_21155 PF00043 Glutathione S-transferase, C-terminal domain BI315_21165 PF00733 Asparagine synthase BI315_21165 PF13537 Glutamine amidotransferase domain BI315_21170 PF03358 NADPH-dependent FMN reductase BI315_21175 PF03796 DnaB-like helicase C terminal domain BI315_21175 PF00772 DnaB-like helicase N terminal domain BI315_21180 PF00875 DNA photolyase BI315_21180 PF03441 FAD binding domain of DNA photolyase BI315_21190 PF05736 OprF membrane domain BI315_21190 PF00691 OmpA family BI315_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_21205 PF03466 LysR substrate binding domain BI315_21220 PF00529 HlyD membrane-fusion protein of T1SS BI315_21220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_21225 PF00873 AcrB/AcrD/AcrF family BI315_21230 PF00106 short chain dehydrogenase BI315_21235 PF02321 Outer membrane efflux protein BI315_21240 PF08448 PAS fold BI315_21240 PF00990 Diguanylate cyclase, GGDEF domain BI315_21250 PF00990 Diguanylate cyclase, GGDEF domain BI315_21370 PF00082 Subtilase family BI315_21375 PF01668 SmpB protein BI315_21380 PF03364 Polyketide cyclase / dehydrase and lipid transport BI315_21385 PF03658 RnfH family Ubiquitin BI315_21390 PF04355 SmpA / OmlA family BI315_21395 PF01475 Ferric uptake regulator family BI315_21400 PF02463 RecF/RecN/SMC N terminal domain BI315_21405 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BI315_21405 PF01628 HrcA protein C terminal domain BI315_21410 PF01025 GrpE BI315_21415 PF00012 Hsp70 protein BI315_21420 PF01556 DnaJ C terminal domain BI315_21420 PF00226 DnaJ domain BI315_21420 PF00684 DnaJ central domain BI315_21430 PF08543 Phosphomethylpyrimidine kinase BI315_21455 PF03412 Peptidase C39 family BI315_21455 PF00005 ABC transporter BI315_21455 PF00664 ABC transporter transmembrane region BI315_21460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_21460 PF03466 LysR substrate binding domain BI315_21465 PF00005 ABC transporter BI315_21465 PF00664 ABC transporter transmembrane region BI315_21470 PF01205 Uncharacterized protein family UPF0029 BI315_21475 PF03641 Possible lysine decarboxylase BI315_21480 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI315_21480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI315_21485 PF02817 e3 binding domain BI315_21485 PF00364 Biotin-requiring enzyme BI315_21485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI315_21490 PF02779 Transketolase, pyrimidine binding domain BI315_21490 PF16078 2-oxoglutarate dehydrogenase N-terminus BI315_21490 PF16870 2-oxoglutarate dehydrogenase C-terminal BI315_21490 PF00676 Dehydrogenase E1 component BI315_21500 PF08007 Cupin superfamily protein BI315_21510 PF08328 Adenylosuccinate lyase C-terminal BI315_21510 PF00206 Lyase BI315_21520 PF01595 Cyclin M transmembrane N-terminal domain BI315_21520 PF00571 CBS domain BI315_21520 PF03471 Transporter associated domain BI315_21525 PF10415 Fumarase C C-terminus BI315_21525 PF00206 Lyase BI315_21550 PF00005 ABC transporter BI315_21555 PF00392 Bacterial regulatory proteins, gntR family BI315_21565 PF00255 Glutathione peroxidase BI315_21570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI315_21570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI315_21575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI315_21575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI315_21575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI315_21580 PF04102 SlyX BI315_21595 PF00356 Bacterial regulatory proteins, lacI family BI315_21600 PF07690 Major Facilitator Superfamily BI315_21605 PF00294 pfkB family carbohydrate kinase BI315_21615 PF00809 Pterin binding enzyme BI315_21615 PF02574 Homocysteine S-methyltransferase BI315_21615 PF02310 B12 binding domain BI315_21615 PF02607 B12 binding domain BI315_21615 PF02965 Vitamin B12 dependent methionine synthase, activation domain BI315_21620 PF00809 Pterin binding enzyme BI315_21620 PF02574 Homocysteine S-methyltransferase BI315_21625 PF01209 ubiE/COQ5 methyltransferase family BI315_21630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_21630 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_21630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_21635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_21635 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_21635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_21640 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_21640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_21640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_21645 PF02770 Acyl-CoA dehydrogenase, middle domain BI315_21645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI315_21645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI315_21665 PF00575 S1 RNA binding domain BI315_21665 PF00773 RNB domain BI315_21665 PF08206 Ribonuclease B OB domain BI315_21665 PF17876 Cold shock domain BI315_21665 PF08461 Ribonuclease R winged-helix domain BI315_21675 PF00588 SpoU rRNA Methylase family BI315_21675 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI315_21680 PF00990 Diguanylate cyclase, GGDEF domain BI315_21680 PF07694 5TMR of 5TMR-LYT BI315_21685 PF00929 Exonuclease BI315_21695 PF01895 PhoU domain BI315_21700 PF00005 ABC transporter BI315_21705 PF00528 Binding-protein-dependent transport system inner membrane component BI315_21710 PF00528 Binding-protein-dependent transport system inner membrane component BI315_21715 PF12849 PBP superfamily domain BI315_21720 PF12849 PBP superfamily domain BI315_21735 PF00484 Carbonic anhydrase BI315_21740 PF00916 Sulfate permease family BI315_21740 PF01740 STAS domain BI315_21745 PF00730 HhH-GPD superfamily base excision DNA repair protein BI315_21745 PF00633 Helix-hairpin-helix motif BI315_21745 PF10576 Iron-sulfur binding domain of endonuclease III BI315_21755 PF00378 Enoyl-CoA hydratase/isomerase BI315_21760 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI315_21760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI315_21765 PF00293 NUDIX domain BI315_21770 PF00581 Rhodanese-like domain BI315_21810 PF01170 Putative RNA methylase family UPF0020 BI315_21810 PF10672 S-adenosylmethionine-dependent methyltransferase BI315_21810 PF02926 THUMP domain BI315_21815 PF01513 ATP-NAD kinase BI315_21840 PF00929 Exonuclease BI315_21840 PF08411 Exonuclease C-terminal BI315_21850 PF01494 FAD binding domain BI315_21855 PF00266 Aminotransferase class-V BI315_21865 PF06052 3-hydroxyanthranilic acid dioxygenase BI315_21870 PF00484 Carbonic anhydrase BI315_21915 PF00072 Response regulator receiver domain BI315_21915 PF00196 Bacterial regulatory proteins, luxR family BI315_21935 PF04299 Putative FMN-binding domain BI315_21955 PF00152 tRNA synthetases class II (D, K and N) BI315_21955 PF01336 OB-fold nucleic acid binding domain BI315_21965 PF01521 Iron-sulphur cluster biosynthesis BI315_21970 PF01250 Ribosomal protein S6 BI315_21975 PF01084 Ribosomal protein S18 BI315_21980 PF03948 Ribosomal protein L9, C-terminal domain BI315_21980 PF01281 Ribosomal protein L9, N-terminal domain BI315_21985 PF02463 RecF/RecN/SMC N terminal domain BI315_21990 PF04354 ZipA, C-terminal FtsZ-binding domain BI315_22000 PF00155 Aminotransferase class I and II BI315_22005 PF12826 Helix-hairpin-helix motif BI315_22005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BI315_22005 PF03120 NAD-dependent DNA ligase OB-fold domain BI315_22005 PF01653 NAD-dependent DNA ligase adenylation domain BI315_22005 PF00533 BRCA1 C Terminus (BRCT) domain BI315_22010 PF00152 tRNA synthetases class II (D, K and N) BI315_22025 PF01008 Initiation factor 2 subunit family BI315_22030 PF00521 DNA gyrase/topoisomerase IV, subunit A BI315_22030 PF03989 DNA gyrase C-terminal domain, beta-propeller BI315_22035 PF13360 PQQ-like domain BI315_22045 PF17391 Urocanase N-terminal domain BI315_22045 PF01175 Urocanase Rossmann-like domain BI315_22045 PF17392 Urocanase C-terminal domain BI315_22055 PF00221 Aromatic amino acid lyase BI315_22060 PF07969 Amidohydrolase family BI315_22075 PF07702 UTRA domain BI315_22075 PF00392 Bacterial regulatory proteins, gntR family BI315_22105 PF01794 Ferric reductase like transmembrane component BI315_22110 PF00174 Oxidoreductase molybdopterin binding domain BI315_22115 PF00266 Aminotransferase class-V BI315_22120 PF01842 ACT domain BI315_22120 PF00800 Prephenate dehydratase BI315_22120 PF01817 Chorismate mutase type II BI315_22125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI315_22135 PF03544 Gram-negative bacterial TonB protein C-terminal BI315_22140 PF02403 Seryl-tRNA synthetase N-terminal domain BI315_22140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI315_22145 PF02525 Flavodoxin-like fold BI315_22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_22150 PF03466 LysR substrate binding domain BI315_22210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_22210 PF00672 HAMP domain BI315_22210 PF02203 Tar ligand binding domain homologue BI315_22230 PF00512 His Kinase A (phospho-acceptor) domain BI315_22230 PF00072 Response regulator receiver domain BI315_22230 PF13188 PAS domain BI315_22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_22230 PF08448 PAS fold BI315_22245 PF06745 KaiC BI315_22250 PF13426 PAS domain BI315_22250 PF00072 Response regulator receiver domain BI315_22250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_22260 PF03918 Cytochrome C biogenesis protein BI315_22265 PF08534 Redoxin BI315_22270 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI315_22270 PF01578 Cytochrome C assembly protein BI315_22275 PF03100 CcmE BI315_22285 PF01578 Cytochrome C assembly protein BI315_22290 PF00082 Subtilase family BI315_22300 PF08281 Sigma-70, region 4 BI315_22300 PF04542 Sigma-70 region 2 BI315_22315 PF00034 Cytochrome c BI315_22330 PF05523 WxcM-like, C-terminal BI315_22350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI315_22355 PF01943 Polysaccharide biosynthesis protein BI315_22360 PF00535 Glycosyl transferase family 2 BI315_22375 PF08241 Methyltransferase domain BI315_22400 PF00534 Glycosyl transferases group 1 BI315_22400 PF13579 Glycosyl transferase 4-like domain BI315_22415 PF00005 ABC transporter BI315_22420 PF00664 ABC transporter transmembrane region BI315_22420 PF00005 ABC transporter BI315_22425 PF07690 Major Facilitator Superfamily BI315_22430 PF00296 Luciferase-like monooxygenase BI315_22445 PF00571 CBS domain BI315_22445 PF03471 Transporter associated domain BI315_22445 PF01595 Cyclin M transmembrane N-terminal domain BI315_22460 PF01384 Phosphate transporter family BI315_22475 PF00204 DNA gyrase B BI315_22475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI315_22475 PF00986 DNA gyrase B subunit, carboxyl terminus BI315_22475 PF01751 Toprim domain BI315_22485 PF06418 CTP synthase N-terminus BI315_22485 PF00117 Glutamine amidotransferase class-I BI315_22490 PF00793 DAHP synthetase I family BI315_22500 PF03952 Enolase, N-terminal domain BI315_22500 PF00113 Enolase, C-terminal TIM barrel domain BI315_22505 PF04977 Septum formation initiator BI315_22510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BI315_22515 PF02542 YgbB family BI315_22520 PF01142 tRNA pseudouridine synthase D (TruD) BI315_22525 PF01713 Smr domain BI315_22530 PF01975 Survival protein SurE BI315_22540 PF09335 SNARE associated Golgi protein BI315_22545 PF01551 Peptidase family M23 BI315_22545 PF01476 LysM domain BI315_22550 PF04430 Protein of unknown function (DUF498/DUF598) BI315_22555 PF01985 CRS1 / YhbY (CRM) domain BI315_22560 PF01728 FtsJ-like methyltransferase BI315_22565 PF01434 Peptidase family M41 BI315_22565 PF06480 FtsH Extracellular BI315_22565 PF17862 AAA+ lid domain BI315_22565 PF00004 ATPase family associated with various cellular activities (AAA) BI315_22570 PF00809 Pterin binding enzyme BI315_22580 PF17209 Hfq protein BI315_22585 PF16360 GTP-binding GTPase Middle Region BI315_22585 PF13167 GTP-binding GTPase N-terminal BI315_22585 PF01926 50S ribosome-binding GTPase BI315_22590 PF02464 Competence-damaged protein BI315_22595 PF03109 ABC1 family BI315_22600 PF01726 LexA DNA binding domain BI315_22600 PF00717 Peptidase S24-like BI315_22605 PF00154 recA bacterial DNA recombination protein BI315_22615 PF02631 RecX family BI315_22620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI315_22620 PF01411 tRNA synthetases class II (A) BI315_22620 PF02272 DHHA1 domain BI315_22625 PF02599 Global regulator protein family BI315_22640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI315_22640 PF08447 PAS fold BI315_22640 PF13426 PAS domain BI315_22645 PF17954 Quercetinase C-terminal cupin domain BI315_22645 PF02678 Pirin BI315_22650 PF03466 LysR substrate binding domain BI315_22650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_22675 PF02581 Thiamine monophosphate synthase BI315_22675 PF08543 Phosphomethylpyrimidine kinase BI315_22690 PF02562 PhoH-like protein BI315_22690 PF13638 PIN domain BI315_22695 PF00578 AhpC/TSA family BI315_22710 PF00701 Dihydrodipicolinate synthetase family BI315_22720 PF11953 Domain of unknown function (DUF3470) BI315_22720 PF00037 4Fe-4S binding domain BI315_22725 PF05035 2-keto-3-deoxy-galactonokinase BI315_22730 PF08450 SMP-30/Gluconolactonase/LRE-like region BI315_22735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI315_22735 PF13378 Enolase C-terminal domain-like BI315_22740 PF01081 KDPG and KHG aldolase BI315_22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI315_22750 PF03466 LysR substrate binding domain BI315_22765 PF00942 Cellulose binding domain BI315_22765 PF03442 Carbohydrate binding domain X2 BI315_22780 PF01055 Glycosyl hydrolases family 31 BI315_22780 PF16338 Domain of unknown function (DUF4968) BI315_22780 PF17137 Domain of unknown function (DUF5110) BI315_22790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI315_22790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI315_22800 PF00083 Sugar (and other) transporter BI315_22820 PF01520 N-acetylmuramoyl-L-alanine amidase BI315_22825 PF02649 Type I GTP cyclohydrolase folE2 BI315_22835 PF01743 Poly A polymerase head domain BI315_22835 PF12626 Polymerase A arginine-rich C-terminus BI315_22835 PF12627 Probable RNA and SrmB- binding site of polymerase A BI315_22840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI315_22845 PF02548 Ketopantoate hydroxymethyltransferase BI315_22850 PF02569 Pantoate-beta-alanine ligase BI315_22855 PF02261 Aspartate decarboxylase BI315_22860 PF00342 Phosphoglucose isomerase BI315_22885 PF00933 Glycosyl hydrolase family 3 N terminal domain BI315_22885 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI315_22885 PF14310 Fibronectin type III-like domain BI315_22895 PF00474 Sodium:solute symporter family BI315_22900 PF00360 Phytochrome region BI315_22900 PF00990 Diguanylate cyclase, GGDEF domain BI315_22900 PF01590 GAF domain BI315_22900 PF00563 EAL domain BI315_22910 PF00150 Cellulase (glycosyl hydrolase family 5) BI315_22910 PF02013 Cellulose or protein binding domain BI315_22915 PF00072 Response regulator receiver domain BI315_22930 PF04551 GcpE protein BI315_22935 PF01569 PAP2 superfamily BI315_22945 PF07690 Major Facilitator Superfamily BI315_22950 PF01177 Asp/Glu/Hydantoin racemase BI315_22955 PF00892 EamA-like transporter family BI315_22960 PF01565 FAD binding domain BI315_22960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BI315_22965 PF01180 Dihydroorotate dehydrogenase BI315_22985 PF00171 Aldehyde dehydrogenase family BI315_23000 PF00535 Glycosyl transferase family 2 BI315_23005 PF01522 Polysaccharide deacetylase BI315_23005 PF14883 Hypothetical glycosyl hydrolase family 13 BI315_23015 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BI315_23015 PF08479 POTRA domain, ShlB-type BI315_23015 PF17287 POTRA domain BI315_23020 PF04829 Pre-toxin domain with VENN motif BI315_23020 PF05594 Haemagluttinin repeat BI315_23020 PF13332 Hemagglutinin repeat BI315_23030 PF05594 Haemagluttinin repeat BI315_23030 PF04829 Pre-toxin domain with VENN motif BI315_23030 PF13332 Hemagglutinin repeat BI315_23040 PF05860 haemagglutination activity domain BI315_23040 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BI315_23040 PF13018 Extended Signal Peptide of Type V secretion system BI315_23040 PF05594 Haemagluttinin repeat BI315_23040 PF13332 Hemagglutinin repeat BI315_23050 PF03447 Homoserine dehydrogenase, NAD binding domain BI315_23050 PF00742 Homoserine dehydrogenase BI315_23050 PF13840 ACT domain BI315_23050 PF01842 ACT domain BI315_23050 PF00696 Amino acid kinase family BI315_23055 PF08544 GHMP kinases C terminal BI315_23055 PF00288 GHMP kinases N terminal domain BI315_23065 PF14821 Threonine synthase N terminus BI315_23065 PF00291 Pyridoxal-phosphate dependent enzyme BI315_23075 PF00027 Cyclic nucleotide-binding domain BI315_23075 PF13545 Crp-like helix-turn-helix domain BI315_23080 PF13393 Histidyl-tRNA synthetase BI315_23080 PF03129 Anticodon binding domain BI315_23090 PF08029 HisG, C-terminal domain BI315_23090 PF01634 ATP phosphoribosyltransferase BI315_23095 PF00815 Histidinol dehydrogenase BI315_23100 PF00155 Aminotransferase class I and II BI315_23105 PF00475 Imidazoleglycerol-phosphate dehydratase BI315_23110 PF00117 Glutamine amidotransferase class-I BI315_23115 PF00977 Histidine biosynthesis protein BI315_23120 PF00977 Histidine biosynthesis protein BI315_23125 PF01502 Phosphoribosyl-AMP cyclohydrolase BI315_23125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BI315_23145 PF03079 ARD/ARD' family BI315_23150 PF00596 Class II Aldolase and Adducin N-terminal domain BI315_23155 PF13520 Amino acid permease BI315_23160 PF13520 Amino acid permease BI315_23170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI315_23170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI315_23170 PF01842 ACT domain BI315_23175 PF01565 FAD binding domain BI315_23175 PF02913 FAD linked oxidases, C-terminal domain BI315_23195 PF01132 Elongation factor P (EF-P) OB domain BI315_23195 PF08207 Elongation factor P (EF-P) KOW-like domain BI315_23195 PF09285 Elongation factor P, C-terminal BI315_23200 PF00106 short chain dehydrogenase BI315_23205 PF00682 HMGL-like BI315_23215 PF00378 Enoyl-CoA hydratase/isomerase BI315_23225 PF07664 Ferrous iron transport protein B C terminus BI315_23225 PF02421 Ferrous iron transport protein B BI315_23225 PF07670 Nucleoside recognition BI315_23240 PF00155 Aminotransferase class I and II BI315_23245 PF03475 3-alpha domain BI315_23245 PF03473 MOSC domain BI315_23250 PF05173 Dihydrodipicolinate reductase, C-terminus BI315_23250 PF01113 Dihydrodipicolinate reductase, N-terminus BI315_23255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BI315_23255 PF00117 Glutamine amidotransferase class-I BI315_23265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BI315_23265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI315_23265 PF02142 MGS-like domain BI315_23270 PF03449 Transcription elongation factor, N-terminal BI315_23270 PF01272 Transcription elongation factor, GreA/GreB, C-term BI315_23280 PF02272 DHHA1 domain BI315_23280 PF17768 RecJ OB domain BI315_23280 PF01368 DHH family BI315_23300 PF13175 AAA ATPase domain BI315_23315 PF16916 Dimerisation domain of Zinc Transporter BI315_23315 PF01545 Cation efflux family BI315_23320 PF02583 Metal-sensitive transcriptional repressor BI315_23325 PF07516 SecA Wing and Scaffold domain BI315_23325 PF01043 SecA preprotein cross-linking domain BI315_23325 PF07517 SecA DEAD-like domain BI315_23325 PF02810 SEC-C motif BI315_23355 PF07732 Multicopper oxidase BI315_23355 PF00394 Multicopper oxidase BI315_23355 PF07731 Multicopper oxidase BI315_23360 PF05275 Copper resistance protein B precursor (CopB) BI315_23390 PF05425 Copper resistance protein D BI315_23395 PF04945 YHS domain BI315_23410 PF00491 Arginase family BI315_23425 PF00873 AcrB/AcrD/AcrF family BI315_23430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_23430 PF00529 HlyD membrane-fusion protein of T1SS BI315_23515 PF13361 UvrD-like helicase C-terminal domain BI315_23515 PF00580 UvrD/REP helicase N-terminal domain BI315_23520 PF02683 Cytochrome C biogenesis protein transmembrane region BI315_23520 PF11412 Disulphide bond corrector protein DsbC BI315_23590 PF13361 UvrD-like helicase C-terminal domain BI315_23590 PF00580 UvrD/REP helicase N-terminal domain BI315_23620 PF04851 Type III restriction enzyme, res subunit BI315_23620 PF00271 Helicase conserved C-terminal domain BI315_23645 PF00436 Single-strand binding protein family BI315_23680 PF02195 ParB-like nuclease domain BI315_23680 PF17762 HTH domain found in ParB protein BI315_23710 PF01527 Transposase BI315_23715 PF13683 Integrase core domain BI315_23715 PF13276 HTH-like domain BI315_23750 PF00565 Staphylococcal nuclease homologue BI315_23755 PF04381 Putative exonuclease, RdgC BI315_23785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI315_23785 PF10135 Rod binding protein BI315_23810 PF13098 Thioredoxin-like domain BI315_23810 PF10411 Disulfide bond isomerase protein N-terminus BI315_23830 PF00072 Response regulator receiver domain BI315_23830 PF00486 Transcriptional regulatory protein, C terminal BI315_23840 PF01966 HD domain BI315_23850 PF13307 Helicase C-terminal domain BI315_23850 PF06733 DEAD_2 BI315_24010 PF13614 AAA domain BI315_24110 PF06834 TraU protein BI315_24195 PF01527 Transposase BI315_24295 PF11798 IMS family HHH motif BI315_24295 PF11799 impB/mucB/samB family C-terminal domain BI315_24295 PF00817 impB/mucB/samB family BI315_24295 PF13438 Domain of unknown function (DUF4113) BI315_24300 PF00717 Peptidase S24-like BI315_24320 PF01526 Tn3 transposase DDE domain BI315_24320 PF13700 Domain of unknown function (DUF4158) BI315_24330 PF09278 MerR, DNA binding BI315_24330 PF00376 MerR family regulatory protein BI315_24350 PF00529 HlyD membrane-fusion protein of T1SS BI315_24350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI315_24355 PF00873 AcrB/AcrD/AcrF family BI315_24365 PF02040 Arsenical pump membrane protein BI315_24370 PF03358 NADPH-dependent FMN reductase BI315_24375 PF03960 ArsC family BI315_24405 PF18340 DNA relaxase TraI 2B/2B-like domain BI315_24405 PF18340 DNA relaxase TraI 2B/2B-like domain BI315_24405 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI315_24405 PF07057 DNA helicase TraI BI315_24405 PF07057 DNA helicase TraI BI315_24405 PF08751 TrwC relaxase BI315_24405 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI315_24405 PF08751 TrwC relaxase BI315_24430 PF01464 Transglycosylase SLT domain BI315_24435 PF00437 Type II/IV secretion system protein BI315_24440 PF03743 Bacterial conjugation TrbI-like protein BI315_24445 PF03524 Conjugal transfer protein BI315_24505 PF01527 Transposase BI315_24520 PF02195 ParB-like nuclease domain BI315_24520 PF08535 KorB domain BI315_24520 PF06613 KorB C-terminal beta-barrel domain BI315_24525 PF13614 AAA domain BI315_24555 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BI315_24560 PF00239 Resolvase, N terminal domain BI315_24560 PF02796 Helix-turn-helix domain of resolvase BI315_24565 PF00239 Resolvase, N terminal domain BI315_24565 PF02796 Helix-turn-helix domain of resolvase BI315_24580 PF01526 Tn3 transposase DDE domain BI315_24580 PF13700 Domain of unknown function (DUF4158) BI315_24600 PF03695 Uncharacterised protein family (UPF0149) BI315_24600 PF02810 SEC-C motif BI315_24615 PF00239 Resolvase, N terminal domain BI315_24615 PF02796 Helix-turn-helix domain of resolvase BI315_24625 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BI315_24650 PF03377 TAL effector repeat BI315_24660 PF02810 SEC-C motif BI315_24660 PF03695 Uncharacterised protein family (UPF0149) BI315_24665 PF13700 Domain of unknown function (DUF4158) BI315_24665 PF01526 Tn3 transposase DDE domain BI315_24680 PF02796 Helix-turn-helix domain of resolvase BI315_24680 PF00239 Resolvase, N terminal domain BI315_24685 PF02796 Helix-turn-helix domain of resolvase BI315_24685 PF00239 Resolvase, N terminal domain BI315_24725 PF13406 Transglycosylase SLT domain BI315_24730 PF01526 Tn3 transposase DDE domain BI315_24730 PF13700 Domain of unknown function (DUF4158) BI315_24760 PF03377 TAL effector repeat BI315_24780 PF07015 VirC1 protein BI315_24840 PF02796 Helix-turn-helix domain of resolvase BI315_24840 PF00239 Resolvase, N terminal domain BI315_24850 PF01527 Transposase BI315_24870 PF13614 AAA domain BI315_24895 PF03377 TAL effector repeat BI315_24915 PF07015 VirC1 protein BI315_24960 PF02534 Type IV secretory system Conjugative DNA transfer BI315_24965 PF00437 Type II/IV secretion system protein BI315_24970 PF03743 Bacterial conjugation TrbI-like protein BI315_24975 PF03524 Conjugal transfer protein BI315_24980 PF04335 VirB8 protein BI315_24985 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BI315_24990 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI315_25000 PF07996 Type IV secretion system proteins BI315_25005 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI315_25010 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI315_25015 PF05101 Type IV secretory pathway, VirB3-like protein BI315_25020 PF04956 TrbC/VIRB2 family BI315_25025 PF01131 DNA topoisomerase BI315_25025 PF01396 Topoisomerase DNA binding C4 zinc finger BI315_25025 PF01751 Toprim domain BI315_25030 PF01464 Transglycosylase SLT domain BI315_25080 PF02661 Fic/DOC family BI315_25080 PF17841 BID domain of Bartonella effector protein (Bep) BI315_25090 PF02796 Helix-turn-helix domain of resolvase BI315_25090 PF00239 Resolvase, N terminal domain BI315_25105 PF01526 Tn3 transposase DDE domain BI315_25105 PF13700 Domain of unknown function (DUF4158) BI315_25110 PF02810 SEC-C motif BI315_25110 PF03695 Uncharacterised protein family (UPF0149) BI315_25120 PF03377 TAL effector repeat BI315_25195 PF13614 AAA domain BI315_25200 PF02195 ParB-like nuclease domain