J163_00006 SM00857 Resolvase, N terminal domain J163_00007 SM00966 SpoVT / AbrB like domain J163_00029 SM00857 Resolvase, N terminal domain J163_00035 SM00670 Large family of predicted nucleotide-binding domains J163_00037 SM00857 Resolvase, N terminal domain J163_00095 SM00470 ParB-like nuclease domain J163_00102 SM00857 Resolvase, N terminal domain J163_00107 SM00670 Large family of predicted nucleotide-binding domains J163_00109 SM00857 Resolvase, N terminal domain J163_00110 SM00382 ATPases associated with a variety of cellular activities J163_00110 SM00760 Bacterial dnaA protein helix-turn-helix domain J163_00111 SM00480 DNA polymerase III beta subunit J163_00114 SM00387 Histidine kinase-like ATPases J163_00114 SM00433 TopoisomeraseII J163_00117 SM00028 Tetratricopeptide repeats J163_00124 SM00155 Phospholipase D. Active site motifs. J163_00127 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_00133 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_00133 SM00245 tail specific protease J163_00141 SM00829 Enoylreductase J163_00166 SM00382 ATPases associated with a variety of cellular activities J163_00190 SM00487 DEAD-like helicases superfamily J163_00190 SM00490 helicase superfamily c-terminal domain J163_00194 SM00822 J163_00194 J163_00195 SM00822 J163_00195 J163_00244 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J163_00248 SM00421 helix_turn_helix, Lux Regulon J163_00248 SM00448 cheY-homologous receiver domain J163_00252 SM00862 Transcriptional regulatory protein, C terminal J163_00268 SM00642 Alpha-amylase domain J163_00269 SM00642 Alpha-amylase domain J163_00270 SM00642 Alpha-amylase domain J163_00280 SM00354 helix_turn _helix lactose operon repressor J163_00288 SM00344 helix_turn_helix ASNC type J163_00292 SM00382 ATPases associated with a variety of cellular activities J163_00295 SM00382 ATPases associated with a variety of cellular activities J163_00301 SM00530 Helix-turn-helix XRE-family like proteins J163_00306 SM00855 Phosphoglycerate mutase family J163_00307 SM00867 YceI-like domain J163_00308 SM00155 Phospholipase D. Active site motifs. J163_00310 SM00563 Phosphate acyltransferases J163_00313 SM00028 Tetratricopeptide repeats J163_00315 SM00829 Enoylreductase J163_00318 SM01230 J163_00318 J163_00319 SM00938 Nitrogen regulatory protein P-II J163_00321 SM00387 Histidine kinase-like ATPases J163_00321 SM00388 His Kinase A (phosphoacceptor) domain J163_00322 SM00382 ATPases associated with a variety of cellular activities J163_00322 SM00448 cheY-homologous receiver domain J163_00334 SM00450 Rhodanese Homology Domain J163_00339 SM00387 Histidine kinase-like ATPases J163_00339 SM00388 His Kinase A (phosphoacceptor) domain J163_00340 SM00382 ATPases associated with a variety of cellular activities J163_00340 SM00448 cheY-homologous receiver domain J163_00362 SM00563 Phosphate acyltransferases J163_00368 SM00342 helix_turn_helix, arabinose operon control protein J163_00373 SM00100 Cyclic nucleotide-monophosphate binding domain J163_00373 SM00267 diguanylate cyclase J163_00378 SM00878 Biotin carboxylase C-terminal domain J163_00383 SM00953 J163_00383 J163_00391 SM00833 Cobalamin synthesis protein cobW C-terminal domain J163_00396 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_00402 SM00829 Enoylreductase J163_00408 SM00487 DEAD-like helicases superfamily J163_00408 SM00490 helicase superfamily c-terminal domain J163_00408 SM00847 Helicase associated domain (HA2) Add an annotation J163_00433 SM00422 helix_turn_helix, mercury resistance J163_00440 SM00448 cheY-homologous receiver domain J163_00440 SM00862 Transcriptional regulatory protein, C terminal J163_00441 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_00441 SM00387 Histidine kinase-like ATPases J163_00441 SM00388 His Kinase A (phosphoacceptor) domain J163_00467 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_00468 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_00472 SM00342 helix_turn_helix, arabinose operon control protein J163_00479 SM00420 helix_turn_helix, Deoxyribose operon repressor J163_00479 SM01134 J163_00479 J163_00482 SM00882 Coenzyme A transferase J163_00483 SM00882 Coenzyme A transferase J163_00487 SM00998 Adenylosuccinate lyase C-terminus J163_00491 SM00346 helix_turn_helix isocitrate lyase regulation J163_00492 SM00090 RIO-like kinase J163_00495 SM01228 J163_00495 J163_00506 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_00506 SM00876 Biotin and Thiamin Synthesis associated domain J163_00511 SM00369 Leucine-rich repeats, typical (most populated) subfamily J163_00531 SM00382 ATPases associated with a variety of cellular activities J163_00543 SM00267 diguanylate cyclase J163_00545 SM00642 Alpha-amylase domain J163_00546 SM00642 Alpha-amylase domain J163_00548 SM00642 Alpha-amylase domain J163_00550 SM00642 Alpha-amylase domain J163_00559 SM00822 J163_00559 J163_00561 SM00487 DEAD-like helicases superfamily J163_00561 SM00490 helicase superfamily c-terminal domain J163_00564 SM00326 Src homology 3 domains J163_00565 SM00861 Transketolase, pyrimidine binding domain J163_00567 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J163_00571 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_00590 SM00271 DnaJ molecular chaperone homology domain J163_00594 SM00046 Diacylglycerol kinase catalytic domain (presumed) J163_00598 SM00903 Flavin reductase like domain J163_00602 SM00100 Cyclic nucleotide-monophosphate binding domain J163_00602 SM00419 helix_turn_helix, cAMP Regulatory protein J163_00612 SM00387 Histidine kinase-like ATPases J163_00612 SM00388 His Kinase A (phosphoacceptor) domain J163_00612 SM00448 cheY-homologous receiver domain J163_00613 SM00052 Putative diguanylate phosphodiesterase J163_00613 SM00267 diguanylate cyclase J163_00613 SM00448 cheY-homologous receiver domain J163_00624 SM00563 Phosphate acyltransferases J163_00628 SM01209 J163_00628 J163_00628 SM01210 J163_00628 J163_00630 SM00798 AICARFT/IMPCHase bienzyme J163_00630 SM00851 MGS-like domain J163_00633 SM00195 Dual specificity phosphatase, catalytic domain J163_00637 SM00563 Phosphate acyltransferases J163_00642 SM00530 Helix-turn-helix XRE-family like proteins J163_00647 SM00878 Biotin carboxylase C-terminal domain J163_00653 SM00342 helix_turn_helix, arabinose operon control protein J163_00655 SM00234 in StAR and phosphatidylcholine transfer protein J163_00659 SM00883 Chaperonin 10 Kd subunit J163_00670 SM00944 Pro-kumamolisin, activation domain J163_00673 SM00867 YceI-like domain J163_00684 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J163_00686 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_00686 SM00895 J163_00686 J163_00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_00690 SM00331 Sigma factor PP2C-like phosphatases J163_00698 SM00342 helix_turn_helix, arabinose operon control protein J163_00710 SM00267 diguanylate cyclase J163_00715 SM00062 Bacterial periplasmic substrate-binding proteins J163_00724 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J163_00724 SM01232 J163_00724 J163_00726 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_00729 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_00729 SM00091 PAS domain J163_00729 SM00267 diguanylate cyclase J163_00730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_00730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_00730 SM01049 J163_00730 J163_00731 SM00637 J163_00731 J163_00733 SM00267 diguanylate cyclase J163_00739 SM00448 cheY-homologous receiver domain J163_00739 SM00850 LytTr DNA-binding domain J163_00755 SM00382 ATPases associated with a variety of cellular activities J163_00755 SM01086 C-terminal, D2-small domain, of ClpB protein J163_00761 SM00267 diguanylate cyclase J163_00762 SM01263 J163_00762 J163_00765 SM00564 beta-propeller repeat J163_00766 SM00062 Bacterial periplasmic substrate-binding proteins J163_00766 SM00248 ankyrin repeats J163_00769 SM00829 Enoylreductase J163_00771 SM00382 ATPases associated with a variety of cellular activities J163_00773 SM00268 Actin J163_00778 SM00710 Parallel beta-helix repeats J163_00781 SM00936 Penicillin-binding protein 5, C-terminal domain J163_00785 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_00786 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_00786 SM00245 tail specific protease J163_00797 SM01350 J163_00797 J163_00799 SM00749 bacterial OsmY and nodulation domain J163_00800 SM00387 Histidine kinase-like ATPases J163_00800 SM00388 His Kinase A (phosphoacceptor) domain J163_00801 SM00448 cheY-homologous receiver domain J163_00802 SM00387 Histidine kinase-like ATPases J163_00802 SM00388 His Kinase A (phosphoacceptor) domain J163_00802 SM00448 cheY-homologous receiver domain J163_00808 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J163_00813 SM00382 ATPases associated with a variety of cellular activities J163_00829 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_00829 SM00866 J163_00829 J163_00831 SM00354 helix_turn _helix lactose operon repressor J163_00845 SM00849 Metallo-beta-lactamase superfamily J163_00846 SM00342 helix_turn_helix, arabinose operon control protein J163_00848 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_00848 SM00387 Histidine kinase-like ATPases J163_00848 SM00388 His Kinase A (phosphoacceptor) domain J163_00849 SM00448 cheY-homologous receiver domain J163_00849 SM00862 Transcriptional regulatory protein, C terminal J163_00853 SM00829 Enoylreductase J163_00856 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_00860 SM00382 ATPases associated with a variety of cellular activities J163_00873 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J163_00879 SM00387 Histidine kinase-like ATPases J163_00879 SM00388 His Kinase A (phosphoacceptor) domain J163_00880 SM00448 cheY-homologous receiver domain J163_00880 SM00862 Transcriptional regulatory protein, C terminal J163_00904 SM00842 Cell division protein FtsA J163_00905 SM00864 Tubulin/FtsZ family, GTPase domain J163_00905 SM00865 Tubulin/FtsZ family, C-terminal domain J163_00909 SM00957 SecA DEAD-like domain J163_00909 SM00958 SecA preprotein cross-linking domain J163_00915 SM00829 Enoylreductase J163_00916 SM00944 Pro-kumamolisin, activation domain J163_00919 SM00642 Alpha-amylase domain J163_00926 SM00996 S-adenosyl-L-homocysteine hydrolase J163_00926 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J163_00951 SM00382 ATPases associated with a variety of cellular activities J163_00955 SM00382 ATPases associated with a variety of cellular activities J163_00957 SM00448 cheY-homologous receiver domain J163_00957 SM00862 Transcriptional regulatory protein, C terminal J163_00958 SM00387 Histidine kinase-like ATPases J163_00958 SM00388 His Kinase A (phosphoacceptor) domain J163_00968 SM00382 ATPases associated with a variety of cellular activities J163_00970 SM00382 ATPases associated with a variety of cellular activities J163_00983 SM00382 ATPases associated with a variety of cellular activities J163_00986 SM00650 Ribosomal RNA adenine dimethylases J163_00991 SM00108 Bulb-type mannose-specific lectin J163_01000 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_01000 SM00895 J163_01000 J163_01007 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_01019 SM00448 cheY-homologous receiver domain J163_01020 SM00387 Histidine kinase-like ATPases J163_01020 SM00388 His Kinase A (phosphoacceptor) domain J163_01020 SM00448 cheY-homologous receiver domain J163_01021 SM00421 helix_turn_helix, Lux Regulon J163_01034 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J163_01034 SM00475 5'-3' exonuclease J163_01040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J163_01040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J163_01064 SM00852 Probable molybdopterin binding domain J163_01065 SM00028 Tetratricopeptide repeats J163_01066 SM00937 J163_01066 J163_01068 SM00028 Tetratricopeptide repeats J163_01072 SM01400 J163_01072 J163_01082 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J163_01082 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J163_01083 SM00649 Ribosomal protein L11/L12 J163_01089 SM00663 RNA polymerase I subunit A N-terminus J163_01092 SM00838 Elongation factor G C-terminus J163_01092 SM00889 Elongation factor G, domain IV J163_01094 SM01403 J163_01094 J163_01098 SM01382 J163_01098 J163_01098 SM01383 J163_01098 J163_01101 SM00322 K homology RNA-binding domain J163_01105 SM01374 J163_01105 J163_01106 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J163_01118 SM00363 S4 RNA-binding domain J163_01118 SM01390 J163_01118 J163_01119 SM00662 RNA polymerases D J163_01127 SM00838 Elongation factor G C-terminus J163_01133 SM00829 Enoylreductase J163_01142 SM00382 ATPases associated with a variety of cellular activities J163_01144 SM00829 Enoylreductase J163_01149 SM00855 Phosphoglycerate mutase family J163_01160 SM00014 Acid phosphatase homologues J163_01164 SM00091 PAS domain J163_01164 SM00387 Histidine kinase-like ATPases J163_01164 SM00388 His Kinase A (phosphoacceptor) domain J163_01165 SM00448 cheY-homologous receiver domain J163_01165 SM00862 Transcriptional regulatory protein, C terminal J163_01169 SM01329 J163_01169 J163_01203 SM00387 Histidine kinase-like ATPases J163_01204 SM00091 PAS domain J163_01208 SM00382 ATPases associated with a variety of cellular activities J163_01208 SM00994 ClpX C4-type zinc finger J163_01208 SM01086 C-terminal, D2-small domain, of ClpB protein J163_01209 SM00382 ATPases associated with a variety of cellular activities J163_01209 SM00464 Found in ATP-dependent protease La (LON) J163_01210 SM00411 bacterial (prokaryotic) histone like domain J163_01216 SM00257 Lysin motif J163_01217 SM00849 Metallo-beta-lactamase superfamily J163_01220 SM00479 J163_01220 J163_01221 SM00331 Sigma factor PP2C-like phosphatases J163_01221 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J163_01226 SM00849 Metallo-beta-lactamase superfamily J163_01227 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_01240 SM00382 ATPases associated with a variety of cellular activities J163_01242 SM00493 J163_01242 J163_01245 SM00460 Transglutaminase/protease-like homologues J163_01247 SM00382 ATPases associated with a variety of cellular activities J163_01256 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J163_01257 SM00822 J163_01257 J163_01259 SM00825 Beta-ketoacyl synthase J163_01266 SM00382 ATPases associated with a variety of cellular activities J163_01275 SM01359 J163_01275 J163_01275 SM01360 J163_01275 J163_01282 SM00271 DnaJ molecular chaperone homology domain J163_01284 SM00448 cheY-homologous receiver domain J163_01286 SM00244 prohibitin homologues J163_01287 SM00244 prohibitin homologues J163_01288 SM01321 J163_01288 J163_01289 SM00788 Adenylosuccinate synthetase J163_01292 SM00822 J163_01292 J163_01302 SM00220 Serine/Threonine protein kinases, catalytic domain J163_01306 SM00855 Phosphoglycerate mutase family J163_01317 SM00052 Putative diguanylate phosphodiesterase J163_01318 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_01320 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J163_01321 SM01092 CO dehydrogenase flavoprotein C-terminal domain J163_01324 SM00974 J163_01324 J163_01328 SM00966 SpoVT / AbrB like domain J163_01332 SM00481 DNA polymerase alpha chain like domain J163_01334 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_01341 SM00091 PAS domain J163_01341 SM00342 helix_turn_helix, arabinose operon control protein J163_01346 SM01060 J163_01346 J163_01358 SM00448 cheY-homologous receiver domain J163_01358 SM00862 Transcriptional regulatory protein, C terminal J163_01359 SM00387 Histidine kinase-like ATPases J163_01359 SM00388 His Kinase A (phosphoacceptor) domain J163_01366 SM00421 helix_turn_helix, Lux Regulon J163_01366 SM00448 cheY-homologous receiver domain J163_01369 SM00478 endonuclease III J163_01373 SM00244 prohibitin homologues J163_01391 SM00904 Riboflavin kinase J163_01400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_01401 SM00382 ATPases associated with a variety of cellular activities J163_01403 SM00862 Transcriptional regulatory protein, C terminal J163_01404 SM00342 helix_turn_helix, arabinose operon control protein J163_01411 SM00387 Histidine kinase-like ATPases J163_01411 SM00388 His Kinase A (phosphoacceptor) domain J163_01412 SM00387 Histidine kinase-like ATPases J163_01412 SM00388 His Kinase A (phosphoacceptor) domain J163_01412 SM00448 cheY-homologous receiver domain J163_01417 SM00387 Histidine kinase-like ATPases J163_01417 SM00388 His Kinase A (phosphoacceptor) domain J163_01417 SM00448 cheY-homologous receiver domain J163_01419 SM00138 Methyltransferase, chemotaxis proteins J163_01420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_01420 SM00387 Histidine kinase-like ATPases J163_01420 SM00388 His Kinase A (phosphoacceptor) domain J163_01420 SM00448 cheY-homologous receiver domain J163_01421 SM00091 PAS domain J163_01421 SM00387 Histidine kinase-like ATPases J163_01421 SM00388 His Kinase A (phosphoacceptor) domain J163_01422 SM00448 cheY-homologous receiver domain J163_01424 SM00813 Alpha-L-arabinofuranosidase C-terminus J163_01427 SM00382 ATPases associated with a variety of cellular activities J163_01427 SM00962 SRP54-type protein, GTPase domain J163_01427 SM00963 SRP54-type protein, helical bundle domain J163_01441 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J163_01441 SM00534 ATPase domain of DNA mismatch repair MUTS family J163_01446 SM00812 Alpha-L-fucosidase J163_01451 SM00530 Helix-turn-helix XRE-family like proteins J163_01461 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_01462 SM00838 Elongation factor G C-terminus J163_01465 SM00358 Double-stranded RNA binding motif J163_01465 SM00535 Ribonuclease III family J163_01468 SM00448 cheY-homologous receiver domain J163_01470 SM01118 J163_01470 J163_01477 SM00357 Cold shock protein domain J163_01480 SM00487 DEAD-like helicases superfamily J163_01480 SM00490 helicase superfamily c-terminal domain J163_01486 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_01486 SM00267 diguanylate cyclase J163_01490 SM00869 Autotransporter beta-domain J163_01491 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J163_01492 SM00671 Sel1-like repeats. J163_01492 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J163_01531 SM00382 ATPases associated with a variety of cellular activities J163_01548 SM00481 DNA polymerase alpha chain like domain J163_01556 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_01562 SM00267 diguanylate cyclase J163_01567 SM00972 Spore Coat Protein U domain J163_01570 SM00972 Spore Coat Protein U domain J163_01572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_01576 SM01172 J163_01576 J163_01577 SM00710 Parallel beta-helix repeats J163_01577 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J163_01584 SM00434 DNA Topoisomerase IV J163_01585 SM00342 helix_turn_helix, arabinose operon control protein J163_01586 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_01591 SM01217 J163_01591 J163_01592 SM00631 J163_01592 J163_01598 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_01602 SM00382 ATPases associated with a variety of cellular activities J163_01605 SM00947 Carbonic anhydrase J163_01608 SM00357 Cold shock protein domain J163_01631 SM00267 diguanylate cyclase J163_01633 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_01633 SM00267 diguanylate cyclase J163_01669 SM00271 DnaJ molecular chaperone homology domain J163_01678 SM00382 ATPases associated with a variety of cellular activities J163_01683 SM00861 Transketolase, pyrimidine binding domain J163_01685 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J163_01689 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_01689 SM01091 Transporter associated domain J163_01695 SM00382 ATPases associated with a variety of cellular activities J163_01696 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_01700 SM00984 UDP binding domain J163_01704 SM00354 helix_turn _helix lactose operon repressor J163_01708 SM01018 B12 binding domain J163_01710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J163_01714 SM00316 Ribosomal protein S1-like RNA-binding domain J163_01714 SM00357 Cold shock protein domain J163_01714 SM00955 J163_01714 J163_01716 SM00967 RNA 2'-O ribose methyltransferase substrate binding J163_01717 SM00267 diguanylate cyclase J163_01718 SM00479 J163_01718 J163_01721 SM00382 ATPases associated with a variety of cellular activities J163_01728 SM00947 Carbonic anhydrase J163_01730 SM00478 endonuclease III J163_01735 SM00450 Rhodanese Homology Domain J163_01737 SM00644 J163_01737 J163_01741 SM00382 ATPases associated with a variety of cellular activities J163_01742 SM00981 J163_01742 J163_01747 SM00479 J163_01747 J163_01752 SM00947 Carbonic anhydrase J163_01761 SM00421 helix_turn_helix, Lux Regulon J163_01761 SM00448 cheY-homologous receiver domain J163_01773 SM00968 SMC proteins Flexible Hinge Domain J163_01774 SM00771 ZipA, C-terminal domain (FtsZ-binding) J163_01777 SM00292 breast cancer carboxy-terminal domain J163_01777 SM00532 Ligase N family J163_01781 SM00434 DNA Topoisomerase IV J163_01782 SM00564 beta-propeller repeat J163_01789 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_01789 SM00866 J163_01789 J163_01794 SM00240 Forkhead associated domain J163_01798 SM00830 Chorismate mutase type II J163_01807 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_01807 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_01809 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_01810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_01810 SM00091 PAS domain J163_01810 SM00387 Histidine kinase-like ATPases J163_01810 SM00388 His Kinase A (phosphoacceptor) domain J163_01810 SM00448 cheY-homologous receiver domain J163_01811 SM00448 cheY-homologous receiver domain J163_01812 SM00382 ATPases associated with a variety of cellular activities J163_01813 SM00091 PAS domain J163_01813 SM00387 Histidine kinase-like ATPases J163_01813 SM00388 His Kinase A (phosphoacceptor) domain J163_01813 SM00448 cheY-homologous receiver domain J163_01844 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_01846 SM00382 ATPases associated with a variety of cellular activities J163_01851 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_01851 SM01091 Transporter associated domain J163_01856 SM00387 Histidine kinase-like ATPases J163_01856 SM00433 TopoisomeraseII J163_01861 SM01192 J163_01861 J163_01861 SM01193 J163_01861 J163_01866 SM00463 Small MutS-related domain J163_01870 SM00257 Lysin motif J163_01873 SM01103 J163_01873 J163_01875 SM00382 ATPases associated with a variety of cellular activities J163_01883 SM00382 ATPases associated with a variety of cellular activities J163_01885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J163_01888 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_01888 SM00091 PAS domain J163_01888 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_01898 SM00670 Large family of predicted nucleotide-binding domains J163_01902 SM01130 J163_01902 J163_01907 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J163_01916 SM00758 J163_01916 J163_01923 SM00646 J163_01923 J163_01939 SM00052 Putative diguanylate phosphodiesterase J163_01939 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_01939 SM00267 diguanylate cyclase J163_01941 SM00448 cheY-homologous receiver domain J163_01942 SM00387 Histidine kinase-like ATPases J163_01944 SM00014 Acid phosphatase homologues J163_01959 SM00912 haemagglutination activity domain J163_01969 SM00100 Cyclic nucleotide-monophosphate binding domain J163_01969 SM00419 helix_turn_helix, cAMP Regulatory protein J163_01984 SM01007 Class II Aldolase and Adducin N-terminal domain J163_01993 SM00841 Elongation factor P, C-terminal J163_01993 SM01185 J163_01993 J163_01994 SM00822 J163_01994 J163_01998 SM00899 J163_01998 J163_02005 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J163_02007 SM00851 MGS-like domain J163_02007 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J163_02018 SM00850 LytTr DNA-binding domain J163_02019 SM00937 J163_02019 J163_02021 SM00448 cheY-homologous receiver domain J163_02021 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_02022 SM00073 Histidine Phosphotransfer domain J163_02022 SM00387 Histidine kinase-like ATPases J163_02022 SM00388 His Kinase A (phosphoacceptor) domain J163_02022 SM00448 cheY-homologous receiver domain J163_02027 SM00966 SpoVT / AbrB like domain J163_02031 SM00052 Putative diguanylate phosphodiesterase J163_02031 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_02031 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02031 SM00091 PAS domain J163_02031 SM00267 diguanylate cyclase J163_02032 SM00448 cheY-homologous receiver domain J163_02034 SM00138 Methyltransferase, chemotaxis proteins J163_02035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02037 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02037 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02038 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02039 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02043 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02044 SM01049 J163_02044 J163_02046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02047 SM00073 Histidine Phosphotransfer domain J163_02047 SM00260 Two component signalling adaptor domain J163_02047 SM00387 Histidine kinase-like ATPases J163_02047 SM01231 J163_02047 J163_02048 SM00448 cheY-homologous receiver domain J163_02050 SM00260 Two component signalling adaptor domain J163_02056 SM00220 Serine/Threonine protein kinases, catalytic domain J163_02070 SM00530 Helix-turn-helix XRE-family like proteins J163_02075 SM00073 Histidine Phosphotransfer domain J163_02075 SM00260 Two component signalling adaptor domain J163_02075 SM00387 Histidine kinase-like ATPases J163_02075 SM01231 J163_02075 J163_02077 SM00448 cheY-homologous receiver domain J163_02080 SM00382 ATPases associated with a variety of cellular activities J163_02080 SM00962 SRP54-type protein, GTPase domain J163_02083 SM00052 Putative diguanylate phosphodiesterase J163_02083 SM00267 diguanylate cyclase J163_02084 SM00267 diguanylate cyclase J163_02085 SM00267 diguanylate cyclase J163_02096 SM00382 ATPases associated with a variety of cellular activities J163_02107 SM00822 J163_02107 J163_02112 SM00382 ATPases associated with a variety of cellular activities J163_02113 SM00448 cheY-homologous receiver domain J163_02115 SM00421 helix_turn_helix, Lux Regulon J163_02115 SM00448 cheY-homologous receiver domain J163_02123 SM00047 Lysozyme subfamily 2 J163_02132 SM00260 Two component signalling adaptor domain J163_02132 SM00448 cheY-homologous receiver domain J163_02133 SM00858 J163_02133 J163_02136 SM00387 Histidine kinase-like ATPases J163_02137 SM00052 Putative diguanylate phosphodiesterase J163_02137 SM00267 diguanylate cyclase J163_02137 SM00448 cheY-homologous receiver domain J163_02138 SM00091 PAS domain J163_02138 SM00387 Histidine kinase-like ATPases J163_02139 SM00052 Putative diguanylate phosphodiesterase J163_02139 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02139 SM00091 PAS domain J163_02139 SM00267 diguanylate cyclase J163_02141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02146 SM00382 ATPases associated with a variety of cellular activities J163_02146 SM01086 C-terminal, D2-small domain, of ClpB protein J163_02147 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02151 SM00382 ATPases associated with a variety of cellular activities J163_02151 SM00843 J163_02151 J163_02155 SM00382 ATPases associated with a variety of cellular activities J163_02162 SM00562 J163_02162 J163_02164 SM00028 Tetratricopeptide repeats J163_02167 SM00564 beta-propeller repeat J163_02168 SM00382 ATPases associated with a variety of cellular activities J163_02169 SM00852 Probable molybdopterin binding domain J163_02170 SM00450 Rhodanese Homology Domain J163_02179 SM00852 Probable molybdopterin binding domain J163_02184 SM00529 Helix-turn-helix diphteria tox regulatory element J163_02186 SM00479 J163_02186 J163_02200 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02200 SM00732 Likely ribonuclease with RNase H fold. J163_02201 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_02201 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02201 SM00091 PAS domain J163_02201 SM00387 Histidine kinase-like ATPases J163_02201 SM00388 His Kinase A (phosphoacceptor) domain J163_02201 SM00448 cheY-homologous receiver domain J163_02202 SM00448 cheY-homologous receiver domain J163_02219 SM00382 ATPases associated with a variety of cellular activities J163_02230 SM00382 ATPases associated with a variety of cellular activities J163_02232 SM00849 Metallo-beta-lactamase superfamily J163_02235 SM00382 ATPases associated with a variety of cellular activities J163_02238 SM00226 Low molecular weight phosphatase family J163_02240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J163_02240 SM00465 GIY-YIG type nucleases (URI domain) J163_02246 SM00823 Phosphopantetheine attachment site J163_02253 SM00984 UDP binding domain J163_02257 SM00450 Rhodanese Homology Domain J163_02258 SM00421 helix_turn_helix, Lux Regulon J163_02258 SM00448 cheY-homologous receiver domain J163_02259 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02260 SM00363 S4 RNA-binding domain J163_02268 SM01034 Sensors of blue-light using FAD J163_02286 SM00448 cheY-homologous receiver domain J163_02286 SM00850 LytTr DNA-binding domain J163_02289 SM00869 Autotransporter beta-domain J163_02293 SM00387 Histidine kinase-like ATPases J163_02293 SM00388 His Kinase A (phosphoacceptor) domain J163_02294 SM00421 helix_turn_helix, Lux Regulon J163_02294 SM00448 cheY-homologous receiver domain J163_02295 SM00869 Autotransporter beta-domain J163_02296 SM00052 Putative diguanylate phosphodiesterase J163_02301 SM01012 J163_02301 J163_02310 SM00342 helix_turn_helix, arabinose operon control protein J163_02311 SM00387 Histidine kinase-like ATPases J163_02312 SM00421 helix_turn_helix, Lux Regulon J163_02312 SM00448 cheY-homologous receiver domain J163_02313 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02320 SM00530 Helix-turn-helix XRE-family like proteins J163_02334 SM00966 SpoVT / AbrB like domain J163_02339 SM00965 Secretin and TonB N terminus short domain J163_02344 SM00736 Dystroglycan-type cadherin-like domains. J163_02349 SM00382 ATPases associated with a variety of cellular activities J163_02359 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J163_02359 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J163_02359 SM00493 J163_02359 J163_02384 SM00342 helix_turn_helix, arabinose operon control protein J163_02393 SM00487 DEAD-like helicases superfamily J163_02444 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_02444 SM01240 J163_02444 J163_02449 SM00822 J163_02449 J163_02451 SM00028 Tetratricopeptide repeats J163_02453 SM00411 bacterial (prokaryotic) histone like domain J163_02454 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02470 SM00354 helix_turn _helix lactose operon repressor J163_02475 SM00363 S4 RNA-binding domain J163_02480 SM00382 ATPases associated with a variety of cellular activities J163_02490 SM00357 Cold shock protein domain J163_02491 SM00382 ATPases associated with a variety of cellular activities J163_02492 SM00382 ATPases associated with a variety of cellular activities J163_02498 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J163_02500 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J163_02503 SM00859 Semialdehyde dehydrogenase, NAD binding domain J163_02511 SM00840 J163_02511 J163_02515 SM01234 J163_02515 J163_02523 SM00849 Metallo-beta-lactamase superfamily J163_02528 SM00656 J163_02528 J163_02536 SM00841 Elongation factor P, C-terminal J163_02536 SM01185 J163_02536 J163_02538 SM00052 Putative diguanylate phosphodiesterase J163_02538 SM00267 diguanylate cyclase J163_02538 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02545 SM00382 ATPases associated with a variety of cellular activities J163_02546 SM00487 DEAD-like helicases superfamily J163_02546 SM00490 helicase superfamily c-terminal domain J163_02551 SM00357 Cold shock protein domain J163_02552 SM01322 J163_02552 J163_02554 SM00052 Putative diguanylate phosphodiesterase J163_02554 SM00267 diguanylate cyclase J163_02557 SM00822 J163_02557 J163_02561 SM00853 MutL C terminal dimerisation domain J163_02561 SM01340 J163_02561 J163_02562 SM00646 J163_02562 J163_02569 SM00474 3'-5' exonuclease J163_02573 SM00528 Domain in histone-like proteins of HNS family J163_02591 SM00857 Resolvase, N terminal domain J163_02606 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_02606 SM00267 diguanylate cyclase J163_02607 SM00260 Two component signalling adaptor domain J163_02608 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_02608 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02610 SM00487 DEAD-like helicases superfamily J163_02610 SM00490 helicase superfamily c-terminal domain J163_02621 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_02626 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_02626 SM01091 Transporter associated domain J163_02632 SM00382 ATPases associated with a variety of cellular activities J163_02638 SM01230 J163_02638 J163_02640 SM01230 J163_02640 J163_02642 SM00267 diguanylate cyclase J163_02642 SM00448 cheY-homologous receiver domain J163_02652 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02652 SM00091 PAS domain J163_02652 SM00387 Histidine kinase-like ATPases J163_02652 SM00388 His Kinase A (phosphoacceptor) domain J163_02652 SM00448 cheY-homologous receiver domain J163_02652 SM01079 J163_02652 J163_02653 SM00448 cheY-homologous receiver domain J163_02653 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_02659 SM00354 helix_turn _helix lactose operon repressor J163_02672 SM01323 J163_02672 J163_02675 SM00344 helix_turn_helix ASNC type J163_02690 SM00387 Histidine kinase-like ATPases J163_02700 SM00944 Pro-kumamolisin, activation domain J163_02711 SM01130 J163_02711 J163_02716 SM00342 helix_turn_helix, arabinose operon control protein J163_02717 SM00382 ATPases associated with a variety of cellular activities J163_02717 SM00962 SRP54-type protein, GTPase domain J163_02717 SM00963 SRP54-type protein, helical bundle domain J163_02718 SM00478 endonuclease III J163_02720 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02720 SM00091 PAS domain J163_02720 SM00387 Histidine kinase-like ATPases J163_02720 SM00388 His Kinase A (phosphoacceptor) domain J163_02720 SM00448 cheY-homologous receiver domain J163_02723 SM00465 GIY-YIG type nucleases (URI domain) J163_02729 SM00507 HNH nucleases J163_02730 SM00861 Transketolase, pyrimidine binding domain J163_02735 SM00849 Metallo-beta-lactamase superfamily J163_02752 SM00422 helix_turn_helix, mercury resistance J163_02753 SM00411 bacterial (prokaryotic) histone like domain J163_02754 SM00873 B3/4 domain J163_02754 SM00874 tRNA synthetase B5 domain J163_02754 SM00896 Ferredoxin-fold anticodon binding domain J163_02760 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J163_02761 SM00354 helix_turn _helix lactose operon repressor J163_02762 SM00642 Alpha-amylase domain J163_02769 SM00642 Alpha-amylase domain J163_02780 SM00382 ATPases associated with a variety of cellular activities J163_02792 SM00487 DEAD-like helicases superfamily J163_02792 SM00490 helicase superfamily c-terminal domain J163_02842 SM01001 AIR carboxylase J163_02846 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02846 SM00322 K homology RNA-binding domain J163_02847 SM01387 J163_02847 J163_02851 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02851 SM00322 K homology RNA-binding domain J163_02861 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J163_02862 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J163_02871 SM00822 J163_02871 J163_02874 SM00052 Putative diguanylate phosphodiesterase J163_02874 SM00267 diguanylate cyclase J163_02874 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02888 SM00859 Semialdehyde dehydrogenase, NAD binding domain J163_02894 SM00257 Lysin motif J163_02900 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_02913 SM01160 J163_02913 J163_02924 SM00098 Alkaline phosphatase homologues J163_02925 SM00977 TilS substrate C-terminal domain J163_02928 SM01351 J163_02928 J163_02935 SM00316 Ribosomal protein S1-like RNA-binding domain J163_02961 SM00382 ATPases associated with a variety of cellular activities J163_02968 SM00448 cheY-homologous receiver domain J163_02968 SM00862 Transcriptional regulatory protein, C terminal J163_02969 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_02969 SM00387 Histidine kinase-like ATPases J163_02969 SM00388 His Kinase A (phosphoacceptor) domain J163_02975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_02975 SM00267 diguanylate cyclase J163_02976 SM00363 S4 RNA-binding domain J163_02977 SM00052 Putative diguanylate phosphodiesterase J163_02977 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_02977 SM00091 PAS domain J163_02977 SM00267 diguanylate cyclase J163_02978 SM00487 DEAD-like helicases superfamily J163_02978 SM00490 helicase superfamily c-terminal domain J163_02987 SM00342 helix_turn_helix, arabinose operon control protein J163_02987 SM00478 endonuclease III J163_02987 SM01009 AlkA N-terminal domain J163_02991 SM00829 Enoylreductase J163_03005 SM00342 helix_turn_helix, arabinose operon control protein J163_03019 SM00645 Papain family cysteine protease J163_03020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_03020 SM00387 Histidine kinase-like ATPases J163_03020 SM00388 His Kinase A (phosphoacceptor) domain J163_03021 SM00448 cheY-homologous receiver domain J163_03021 SM00862 Transcriptional regulatory protein, C terminal J163_03024 SM00487 DEAD-like helicases superfamily J163_03024 SM00490 helicase superfamily c-terminal domain J163_03024 SM00982 J163_03024 J163_03024 SM01058 CarD-like/TRCF domain J163_03031 SM00073 Histidine Phosphotransfer domain J163_03031 SM00260 Two component signalling adaptor domain J163_03031 SM00387 Histidine kinase-like ATPases J163_03031 SM01231 J163_03031 J163_03032 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_03033 SM00260 Two component signalling adaptor domain J163_03034 SM00052 Putative diguanylate phosphodiesterase J163_03034 SM00448 cheY-homologous receiver domain J163_03035 SM00138 Methyltransferase, chemotaxis proteins J163_03036 SM00448 cheY-homologous receiver domain J163_03037 SM00155 Phospholipase D. Active site motifs. J163_03040 SM00855 Phosphoglycerate mutase family J163_03050 SM00248 ankyrin repeats J163_03060 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J163_03061 SM01092 CO dehydrogenase flavoprotein C-terminal domain J163_03063 SM00829 Enoylreductase J163_03064 SM00267 diguanylate cyclase J163_03077 SM00732 Likely ribonuclease with RNase H fold. J163_03084 SM00382 ATPases associated with a variety of cellular activities J163_03087 SM00411 bacterial (prokaryotic) histone like domain J163_03093 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J163_03096 SM00382 ATPases associated with a variety of cellular activities J163_03102 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J163_03103 SM00671 Sel1-like repeats. J163_03109 SM00054 EF-hand, calcium binding motif J163_03127 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_03131 SM00382 ATPases associated with a variety of cellular activities J163_03140 SM00924 MgtE intracellular N domain J163_03146 SM00656 J163_03146 J163_03148 SM00421 helix_turn_helix, Lux Regulon J163_03154 SM00849 Metallo-beta-lactamase superfamily J163_03156 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J163_03160 SM00422 helix_turn_helix, mercury resistance J163_03187 SM00342 helix_turn_helix, arabinose operon control protein J163_03189 SM00387 Histidine kinase-like ATPases J163_03189 SM00388 His Kinase A (phosphoacceptor) domain J163_03189 SM00448 cheY-homologous receiver domain J163_03190 SM00387 Histidine kinase-like ATPases J163_03190 SM00388 His Kinase A (phosphoacceptor) domain J163_03190 SM00448 cheY-homologous receiver domain J163_03192 SM00387 Histidine kinase-like ATPases J163_03192 SM00388 His Kinase A (phosphoacceptor) domain J163_03192 SM00448 cheY-homologous receiver domain J163_03193 SM00867 YceI-like domain J163_03195 SM00867 YceI-like domain J163_03207 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_03213 SM00028 Tetratricopeptide repeats J163_03233 SM00812 Alpha-L-fucosidase J163_03234 SM00636 J163_03234 J163_03237 SM00758 J163_03237 J163_03237 SM01217 J163_03237 J163_03243 SM01149 J163_03243 J163_03250 SM00369 Leucine-rich repeats, typical (most populated) subfamily J163_03254 SM00260 Two component signalling adaptor domain J163_03256 SM00073 Histidine Phosphotransfer domain J163_03256 SM00260 Two component signalling adaptor domain J163_03256 SM00387 Histidine kinase-like ATPases J163_03256 SM00448 cheY-homologous receiver domain J163_03256 SM01231 J163_03256 J163_03257 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03258 SM00260 Two component signalling adaptor domain J163_03259 SM00448 cheY-homologous receiver domain J163_03260 SM00448 cheY-homologous receiver domain J163_03265 SM00491 J163_03265 J163_03270 SM00954 Region found in RelA / SpoT proteins J163_03279 SM00382 ATPases associated with a variety of cellular activities J163_03279 SM00487 DEAD-like helicases superfamily J163_03279 SM00490 helicase superfamily c-terminal domain J163_03279 SM00847 Helicase associated domain (HA2) Add an annotation J163_03281 SM00341 Helicase and RNase D C-terminal J163_03281 SM00487 DEAD-like helicases superfamily J163_03281 SM00490 helicase superfamily c-terminal domain J163_03281 SM00956 J163_03281 J163_03283 SM00448 cheY-homologous receiver domain J163_03288 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03288 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_03291 SM00448 cheY-homologous receiver domain J163_03292 SM00091 PAS domain J163_03292 SM00911 HWE histidine kinase J163_03303 SM00382 ATPases associated with a variety of cellular activities J163_03306 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J163_03313 SM00834 Putative regulatory protein J163_03322 SM00382 ATPases associated with a variety of cellular activities J163_03342 SM00855 Phosphoglycerate mutase family J163_03354 SM00382 ATPases associated with a variety of cellular activities J163_03354 SM01086 C-terminal, D2-small domain, of ClpB protein J163_03355 SM00382 ATPases associated with a variety of cellular activities J163_03357 SM00062 Bacterial periplasmic substrate-binding proteins J163_03372 SM00564 beta-propeller repeat J163_03373 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03394 SM01126 J163_03394 J163_03396 SM00881 CoA binding domain J163_03398 SM00387 Histidine kinase-like ATPases J163_03398 SM00388 His Kinase A (phosphoacceptor) domain J163_03399 SM00382 ATPases associated with a variety of cellular activities J163_03399 SM00448 cheY-homologous receiver domain J163_03414 SM00387 Histidine kinase-like ATPases J163_03414 SM00388 His Kinase A (phosphoacceptor) domain J163_03415 SM00448 cheY-homologous receiver domain J163_03415 SM00862 Transcriptional regulatory protein, C terminal J163_03418 SM00642 Alpha-amylase domain J163_03419 SM00528 Domain in histone-like proteins of HNS family J163_03421 SM00318 Staphylococcal nuclease homologues J163_03435 SM00387 Histidine kinase-like ATPases J163_03435 SM00388 His Kinase A (phosphoacceptor) domain J163_03436 SM00448 cheY-homologous receiver domain J163_03438 SM00646 J163_03438 J163_03447 SM00530 Helix-turn-helix XRE-family like proteins J163_03451 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_03451 SM00387 Histidine kinase-like ATPases J163_03455 SM00255 Toll - interleukin 1 - resistance J163_03458 SM00869 Autotransporter beta-domain J163_03468 SM00354 helix_turn _helix lactose operon repressor J163_03474 SM00967 RNA 2'-O ribose methyltransferase substrate binding J163_03495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_03495 SM00387 Histidine kinase-like ATPases J163_03501 SM00506 Appr-1"-p processing enzyme J163_03510 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J163_03515 SM00849 Metallo-beta-lactamase superfamily J163_03518 SM00382 ATPases associated with a variety of cellular activities J163_03530 SM00861 Transketolase, pyrimidine binding domain J163_03533 SM00028 Tetratricopeptide repeats J163_03533 SM00327 von Willebrand factor (vWF) type A domain J163_03534 SM00327 von Willebrand factor (vWF) type A domain J163_03537 SM00382 ATPases associated with a variety of cellular activities J163_03539 SM00965 Secretin and TonB N terminus short domain J163_03550 SM00487 DEAD-like helicases superfamily J163_03550 SM00490 helicase superfamily c-terminal domain J163_03552 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J163_03552 SM00954 Region found in RelA / SpoT proteins J163_03553 SM01409 J163_03553 J163_03554 SM00072 Guanylate kinase homologues. J163_03559 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_03565 SM01011 Aminopeptidase P, N-terminal domain J163_03580 SM00028 Tetratricopeptide repeats J163_03580 SM00382 ATPases associated with a variety of cellular activities J163_03580 SM00421 helix_turn_helix, Lux Regulon J163_03594 SM00464 Found in ATP-dependent protease La (LON) J163_03604 SM00342 helix_turn_helix, arabinose operon control protein J163_03605 SM00862 Transcriptional regulatory protein, C terminal J163_03609 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03615 SM00917 LeuA allosteric (dimerisation) domain J163_03616 SM01329 J163_03616 J163_03620 SM00267 diguanylate cyclase J163_03630 SM00919 Malic enzyme, NAD binding domain J163_03630 SM01274 J163_03630 J163_03633 SM00387 Histidine kinase-like ATPases J163_03633 SM00388 His Kinase A (phosphoacceptor) domain J163_03633 SM00448 cheY-homologous receiver domain J163_03641 SM00421 helix_turn_helix, Lux Regulon J163_03641 SM00448 cheY-homologous receiver domain J163_03643 SM00387 Histidine kinase-like ATPases J163_03643 SM00388 His Kinase A (phosphoacceptor) domain J163_03644 SM00448 cheY-homologous receiver domain J163_03644 SM00862 Transcriptional regulatory protein, C terminal J163_03648 SM00822 J163_03648 J163_03649 SM00354 helix_turn _helix lactose operon repressor J163_03652 SM00642 Alpha-amylase domain J163_03654 SM01154 J163_03654 J163_03661 SM00450 Rhodanese Homology Domain J163_03674 SM00028 Tetratricopeptide repeats J163_03689 SM00345 helix_turn_helix gluconate operon transcriptional repressor J163_03689 SM00866 J163_03689 J163_03701 SM00382 ATPases associated with a variety of cellular activities J163_03706 SM01211 J163_03706 J163_03719 SM00656 J163_03719 J163_03725 SM00528 Domain in histone-like proteins of HNS family J163_03728 SM00382 ATPases associated with a variety of cellular activities J163_03734 SM00882 Coenzyme A transferase J163_03735 SM00882 Coenzyme A transferase J163_03738 SM00984 UDP binding domain J163_03743 SM00893 Electron transfer flavoprotein domain J163_03744 SM00893 Electron transfer flavoprotein domain J163_03758 SM00382 ATPases associated with a variety of cellular activities J163_03761 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_03768 SM00487 DEAD-like helicases superfamily J163_03768 SM00490 helicase superfamily c-terminal domain J163_03775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_03782 SM00825 Beta-ketoacyl synthase J163_03797 SM00382 ATPases associated with a variety of cellular activities J163_03801 SM00382 ATPases associated with a variety of cellular activities J163_03801 SM00387 Histidine kinase-like ATPases J163_03801 SM00448 cheY-homologous receiver domain J163_03804 SM00830 Chorismate mutase type II J163_03806 SM00382 ATPases associated with a variety of cellular activities J163_03820 SM00986 Uracil DNA glycosylase superfamily J163_03820 SM00987 UreE urease accessory protein, C-terminal domain J163_03826 SM00382 ATPases associated with a variety of cellular activities J163_03826 SM00930 J163_03826 J163_03830 SM00387 Histidine kinase-like ATPases J163_03830 SM00388 His Kinase A (phosphoacceptor) domain J163_03830 SM00448 cheY-homologous receiver domain J163_03840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_03840 SM00091 PAS domain J163_03840 SM00387 Histidine kinase-like ATPases J163_03840 SM00388 His Kinase A (phosphoacceptor) domain J163_03840 SM00448 cheY-homologous receiver domain J163_03844 SM01005 Alanine racemase, C-terminal domain J163_03846 SM00344 helix_turn_helix ASNC type J163_03857 SM00382 ATPases associated with a variety of cellular activities J163_03859 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J163_03860 SM00986 Uracil DNA glycosylase superfamily J163_03860 SM00987 UreE urease accessory protein, C-terminal domain J163_03861 SM00729 Elongator protein 3, MiaB family, Radical SAM J163_03874 SM00448 cheY-homologous receiver domain J163_03874 SM00850 LytTr DNA-binding domain J163_03875 SM00387 Histidine kinase-like ATPases J163_03882 SM00091 PAS domain J163_03882 SM00138 Methyltransferase, chemotaxis proteins J163_03882 SM00911 HWE histidine kinase J163_03883 SM00448 cheY-homologous receiver domain J163_03885 SM00382 ATPases associated with a variety of cellular activities J163_03885 SM00448 cheY-homologous receiver domain J163_03896 SM00382 ATPases associated with a variety of cellular activities J163_03911 SM00382 ATPases associated with a variety of cellular activities J163_03912 SM00631 J163_03912 J163_03920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J163_03920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_03921 SM00477 DNA/RNA non-specific endonuclease J163_03921 SM00892 DNA/RNA non-specific endonuclease J163_03952 SM00257 Lysin motif J163_03957 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J163_03957 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J163_03957 SM00493 J163_03957 J163_03968 SM00487 DEAD-like helicases superfamily J163_03968 SM00490 helicase superfamily c-terminal domain J163_03975 SM00986 Uracil DNA glycosylase superfamily J163_03975 SM00987 UreE urease accessory protein, C-terminal domain J163_03976 SM00448 cheY-homologous receiver domain J163_03978 SM00382 ATPases associated with a variety of cellular activities J163_03979 SM00487 DEAD-like helicases superfamily J163_03979 SM00490 helicase superfamily c-terminal domain J163_03981 SM00357 Cold shock protein domain J163_03981 SM00382 ATPases associated with a variety of cellular activities J163_03981 SM00959 Rho termination factor, N-terminal domain J163_03987 SM00487 DEAD-like helicases superfamily J163_03996 SM00257 Lysin motif J163_04002 SM01150 J163_04002 J163_04011 SM00644 J163_04011 J163_04013 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J163_04020 SM01217 J163_04020 J163_04021 SM00905 Dihydroneopterin aldolase J163_04026 SM00400 zinc finger J163_04026 SM00493 J163_04026 J163_04026 SM00766 DNA primase DnaG DnaB-binding J163_04048 SM00363 S4 RNA-binding domain J163_04057 SM00470 ParB-like nuclease domain J163_04061 SM01259 J163_04061 J163_04067 SM00836 DALR anticodon binding domain J163_04067 SM01016 Arginyl tRNA synthetase N terminal dom J163_04073 SM00823 Phosphopantetheine attachment site J163_04073 SM00824 Thioesterase J163_04080 SM00938 Nitrogen regulatory protein P-II J163_04082 SM00382 ATPases associated with a variety of cellular activities J163_04085 SM00052 Putative diguanylate phosphodiesterase J163_04093 SM00244 prohibitin homologues J163_04103 SM00448 cheY-homologous receiver domain J163_04103 SM00862 Transcriptional regulatory protein, C terminal J163_04104 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J163_04104 SM00387 Histidine kinase-like ATPases J163_04104 SM00388 His Kinase A (phosphoacceptor) domain J163_04108 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J163_04117 SM01060 J163_04117 J163_04120 SM00421 helix_turn_helix, Lux Regulon J163_04120 SM00448 cheY-homologous receiver domain J163_04123 SM00382 ATPases associated with a variety of cellular activities J163_04132 SM00849 Metallo-beta-lactamase superfamily J163_04138 SM00960 Roadblock/LC7 domain J163_04151 SM00387 Histidine kinase-like ATPases J163_04151 SM00388 His Kinase A (phosphoacceptor) domain J163_04152 SM00448 cheY-homologous receiver domain J163_04152 SM00862 Transcriptional regulatory protein, C terminal J163_04156 SM00248 ankyrin repeats J163_04157 SM01060 J163_04157 J163_04158 SM00491 J163_04158 J163_04164 SM00477 DNA/RNA non-specific endonuclease J163_04164 SM00892 DNA/RNA non-specific endonuclease J163_04167 SM01004 Delta-aminolevulinic acid dehydratase J163_04175 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J163_04179 SM00382 ATPases associated with a variety of cellular activities J163_04181 SM00530 Helix-turn-helix XRE-family like proteins J163_04189 SM00342 helix_turn_helix, arabinose operon control protein J163_04191 SM00382 ATPases associated with a variety of cellular activities J163_04204 SM00881 CoA binding domain J163_04205 SM00116 Domain in cystathionine beta-synthase and other proteins. J163_04205 SM00924 MgtE intracellular N domain J163_04206 SM01057 Eukaryotic-type carbonic anhydrase J163_04211 SM00248 ankyrin repeats J163_04213 SM00825 Beta-ketoacyl synthase J163_04218 SM00822 J163_04218 J163_04227 SM00563 Phosphate acyltransferases J163_04238 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J163_04238 SM00474 3'-5' exonuclease J163_04238 SM00475 5'-3' exonuclease J163_04238 SM00482 DNA polymerase A domain J163_04241 SM00912 haemagglutination activity domain J163_04245 SM00331 Sigma factor PP2C-like phosphatases J163_04245 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J163_04250 SM00240 Forkhead associated domain J163_04253 SM00028 Tetratricopeptide repeats J163_04255 SM00220 Serine/Threonine protein kinases, catalytic domain J163_04259 SM00965 Secretin and TonB N terminus short domain J163_04261 SM00915 Jacalin-like lectin domain J163_04267 SM00382 ATPases associated with a variety of cellular activities J163_04267 SM01086 C-terminal, D2-small domain, of ClpB protein J163_04275 SM00342 helix_turn_helix, arabinose operon control protein J163_04277 SM01266 J163_04277 J163_04281 SM00155 Phospholipase D. Active site motifs. J163_04310 SM00421 helix_turn_helix, Lux Regulon J163_04310 SM00448 cheY-homologous receiver domain J163_04320 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J163_04324 SM00346 helix_turn_helix isocitrate lyase regulation J163_04326 SM00091 PAS domain J163_04326 SM00387 Histidine kinase-like ATPases J163_04326 SM00388 His Kinase A (phosphoacceptor) domain J163_04326 SM00448 cheY-homologous receiver domain J163_04331 SM00564 beta-propeller repeat J163_04341 SM00382 ATPases associated with a variety of cellular activities J163_04343 SM00836 DALR anticodon binding domain J163_04345 SM00382 ATPases associated with a variety of cellular activities J163_04359 SM00354 helix_turn _helix lactose operon repressor J163_04362 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J163_04364 SM00758 J163_04364 J163_04364 SM01217 J163_04364 J163_04368 SM00612 J163_04368 J163_04375 SM01007 Class II Aldolase and Adducin N-terminal domain J163_04380 SM00633 Glycosyl hydrolase family 10 J163_04383 SM00633 Glycosyl hydrolase family 10 J163_04385 SM00633 Glycosyl hydrolase family 10 J163_04399 SM00829 Enoylreductase J163_04400 SM00563 Phosphate acyltransferases J163_04402 SM00354 helix_turn _helix lactose operon repressor J163_04406 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J163_04414 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_04414 SM00388 His Kinase A (phosphoacceptor) domain J163_04417 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J163_04417 SM01232 J163_04417 J163_04425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_04425 SM00091 PAS domain J163_04436 SM00347 helix_turn_helix multiple antibiotic resistance protein J163_04443 SM00155 Phospholipase D. Active site motifs. J163_04459 SM00796 Allophanate hydrolase subunit 1 J163_04459 SM00797 Allophanate hydrolase subunit 2 J163_04459 SM00878 Biotin carboxylase C-terminal domain J163_04473 SM00382 ATPases associated with a variety of cellular activities J163_04483 SM00829 Enoylreductase J163_04491 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J163_04491 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J163_04491 SM00091 PAS domain J163_04491 SM00267 diguanylate cyclase J163_04497 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J163_04503 SM00014 Acid phosphatase homologues J163_04505 SM00028 Tetratricopeptide repeats