J164_00004 PF01527 Transposase J164_00005 PF00665 Integrase core domain J164_00006 PF00239 Resolvase, N terminal domain J164_00008 PF01850 PIN domain J164_00019 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_00022 PF03090 J164_00022 J164_00022 PF08708 Primase C terminal 1 (PriCT-1) J164_00023 PF03377 Xanthomonas avirulence protein, Avr/PthA J164_00025 PF07929 Plasmid pRiA4b ORF-3-like protein J164_00027 PF02452 PemK-like protein J164_00029 PF00239 Resolvase, N terminal domain J164_00031 PF01526 J164_00031 J164_00032 PF01609 Transposase DDE domain J164_00034 PF01526 J164_00034 J164_00034 PF13700 J164_00034 J164_00035 PF13470 J164_00035 J164_00036 PF16762 J164_00036 J164_00037 PF00239 Resolvase, N terminal domain J164_00038 PF03377 Xanthomonas avirulence protein, Avr/PthA J164_00041 PF09274 ParG J164_00042 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_00043 PF11740 J164_00043 J164_00048 PF01435 Peptidase family M48 J164_00050 PF01471 Putative peptidoglycan binding domain J164_00050 PF13406 Transglycosylase SLT domain J164_00051 PF01526 J164_00051 J164_00051 PF13700 J164_00051 J164_00052 PF00589 Phage integrase family J164_00053 PF11740 J164_00053 J164_00055 PF03377 Xanthomonas avirulence protein, Avr/PthA J164_00056 PF03090 J164_00056 J164_00056 PF08708 Primase C terminal 1 (PriCT-1) J164_00059 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_00071 PF10412 Type IV secretion-system coupling protein DNA-binding domain J164_00072 PF08751 TrwC relaxase J164_00072 PF13538 UvrD-like helicase C-terminal domain J164_00072 PF13604 AAA domain J164_00073 PF02452 PemK-like protein J164_00074 PF11455 J164_00074 J164_00077 PF01464 Transglycosylase SLT domain J164_00078 PF00437 Type II/IV secretion system protein J164_00079 PF03743 Bacterial conjugation TrbI-like protein J164_00080 PF03524 Conjugal transfer protein J164_00081 PF04335 VirB8 protein J164_00082 PF04610 J164_00082 J164_00085 PF07996 Type IV secretion system proteins J164_00086 PF03135 J164_00086 J164_00087 PF05101 J164_00087 J164_00088 PF04956 J164_00088 J164_00091 PF00665 Integrase core domain J164_00092 PF01527 Transposase J164_00094 PF16509 J164_00094 J164_00095 PF02195 ParB-like nuclease domain J164_00095 PF08535 KorB domain J164_00096 PF13614 AAA domain J164_00097 PF04796 J164_00097 J164_00098 PF06414 Zeta toxin J164_00100 PF01850 PIN domain J164_00101 PF04014 Antidote-toxin recognition MazE J164_00102 PF00239 Resolvase, N terminal domain J164_00103 PF13333 J164_00103 J164_00104 PF00665 Integrase core domain J164_00105 PF03377 Xanthomonas avirulence protein, Avr/PthA J164_00106 PF01526 J164_00106 J164_00106 PF13700 J164_00106 J164_00107 PF13470 J164_00107 J164_00108 PF16762 J164_00108 J164_00109 PF00239 Resolvase, N terminal domain J164_00110 PF00308 Bacterial dnaA protein J164_00110 PF08299 Bacterial dnaA protein helix-turn-helix J164_00110 PF11638 DnaA N-terminal domain J164_00111 PF00712 DNA polymerase III beta subunit, N-terminal domain J164_00111 PF02767 DNA polymerase III beta subunit, central domain J164_00111 PF02768 DNA polymerase III beta subunit, C-terminal domain J164_00112 PF02463 RecF/RecN/SMC N terminal domain J164_00114 PF00204 DNA gyrase B J164_00114 PF00986 DNA gyrase B subunit, carboxyl terminus J164_00114 PF01751 Toprim domain J164_00114 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00115 PF02517 CAAX protease self-immunity J164_00116 PF01435 Peptidase family M48 J164_00117 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) J164_00118 PF03544 Gram-negative bacterial TonB protein C-terminal J164_00119 PF01618 J164_00119 J164_00120 PF02472 Biopolymer transport protein ExbD/TolR J164_00121 PF02472 Biopolymer transport protein ExbD/TolR J164_00122 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J164_00124 PF13091 PLD-like domain J164_00127 PF04055 Radical SAM superfamily J164_00128 PF13640 2OG-Fe(II) oxygenase superfamily J164_00129 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J164_00130 PF01694 Rhomboid family J164_00131 PF08850 J164_00131 J164_00132 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J164_00132 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J164_00133 PF03572 Peptidase family S41 J164_00133 PF13180 PDZ domain J164_00134 PF01551 Peptidase family M23 J164_00136 PF02225 PA domain J164_00136 PF04389 Peptidase family M28 J164_00137 PF13670 J164_00137 J164_00138 PF00150 Cellulase (glycosyl hydrolase family 5) J164_00139 PF00150 Cellulase (glycosyl hydrolase family 5) J164_00140 PF00150 Cellulase (glycosyl hydrolase family 5) J164_00141 PF00107 Zinc-binding dehydrogenase J164_00141 PF08240 Alcohol dehydrogenase GroES-like domain J164_00142 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_00142 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J164_00143 PF00310 Glutamine amidotransferases class-II J164_00143 PF01493 GXGXG motif J164_00143 PF01645 Conserved region in glutamate synthase J164_00143 PF04898 Glutamate synthase central domain J164_00144 PF11720 Peptidase inhibitor I78 family J164_00145 PF01028 Eukaryotic DNA topoisomerase I, catalytic core J164_00147 PF01804 Penicillin amidase J164_00148 PF05368 NmrA-like family J164_00149 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00149 PF03466 LysR substrate binding domain J164_00150 PF00534 Glycosyl transferases group 1 J164_00150 PF13439 Glycosyltransferase Family 4 J164_00151 PF00534 Glycosyl transferases group 1 J164_00151 PF13439 Glycosyltransferase Family 4 J164_00152 PF02397 J164_00152 J164_00152 PF13727 CoA-binding domain J164_00153 PF02350 UDP-N-acetylglucosamine 2-epimerase J164_00154 PF04932 J164_00154 J164_00155 PF03808 J164_00155 J164_00156 PF13439 Glycosyltransferase Family 4 J164_00156 PF13692 Glycosyl transferases group 1 J164_00159 PF13489 Methyltransferase domain J164_00160 PF00733 Asparagine synthase J164_00160 PF13537 Glutamine amidotransferase domain J164_00162 PF05711 Macrocin-O-methyltransferase (TylF) J164_00163 PF01370 NAD dependent epimerase/dehydratase family J164_00165 PF01943 J164_00165 J164_00165 PF14667 Polysaccharide biosynthesis C-terminal domain J164_00166 PF00005 ABC transporter J164_00166 PF00664 ABC transporter transmembrane region J164_00167 PF13471 J164_00167 J164_00168 PF00733 Asparagine synthase J164_00168 PF13537 Glutamine amidotransferase domain J164_00170 PF13847 Methyltransferase domain J164_00171 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J164_00173 PF00685 Sulfotransferase domain J164_00174 PF13673 Acetyltransferase (GNAT) domain J164_00175 PF07484 Phage Tail Collar Domain J164_00176 PF07484 Phage Tail Collar Domain J164_00177 PF07484 Phage Tail Collar Domain J164_00178 PF14907 Uncharacterised nucleotidyltransferase J164_00179 PF03965 Penicillinase repressor J164_00180 PF05569 BlaR1 peptidase M56 J164_00183 PF03435 Saccharopine dehydrogenase J164_00185 PF08975 Domain of unknown function (DUF1868) J164_00186 PF00593 TonB dependent receptor J164_00186 PF07715 TonB-dependent Receptor Plug Domain J164_00187 PF00480 ROK family J164_00188 PF03009 Glycerophosphoryl diester phosphodiesterase family J164_00189 PF13482 RNase_H superfamily J164_00190 PF00270 DEAD/DEAH box helicase J164_00190 PF00271 Helicase conserved C-terminal domain J164_00190 PF09369 J164_00190 J164_00191 PF03006 J164_00191 J164_00192 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J164_00193 PF05016 Plasmid stabilisation system protein J164_00194 PF00106 short chain dehydrogenase J164_00195 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00196 PF03466 LysR substrate binding domain J164_00197 PF14305 J164_00197 J164_00200 PF02525 Flavodoxin-like fold J164_00201 PF10592 J164_00201 J164_00202 PF01527 Transposase J164_00203 PF00665 Integrase core domain J164_00203 PF13276 J164_00203 J164_00205 PF01609 Transposase DDE domain J164_00211 PF05532 CsbD-like J164_00212 PF08668 HDOD domain J164_00213 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J164_00215 PF01447 Thermolysin metallopeptidase, catalytic domain J164_00215 PF02868 Thermolysin metallopeptidase, alpha-helical domain J164_00216 PF13460 NADH(P)-binding J164_00217 PF00293 NUDIX domain J164_00218 PF01435 Peptidase family M48 J164_00219 PF10116 J164_00219 J164_00220 PF00085 Thioredoxin J164_00221 PF00083 Sugar (and other) transporter J164_00222 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J164_00223 PF12787 J164_00223 J164_00224 PF06080 J164_00224 J164_00227 PF07584 J164_00227 J164_00228 PF01882 J164_00228 J164_00229 PF07726 ATPase family associated with various cellular activities (AAA) J164_00230 PF13709 Domain of unknown function (DUF4159) J164_00231 PF01523 Putative modulator of DNA gyrase J164_00232 PF01523 Putative modulator of DNA gyrase J164_00233 PF01523 Putative modulator of DNA gyrase J164_00235 PF00316 Fructose-1-6-bisphosphatase J164_00236 PF00155 Aminotransferase class I and II J164_00237 PF00593 TonB dependent receptor J164_00237 PF07715 TonB-dependent Receptor Plug Domain J164_00239 PF07883 Cupin domain J164_00240 PF00171 Aldehyde dehydrogenase family J164_00241 PF05610 J164_00241 J164_00244 PF02735 Ku70/Ku80 beta-barrel domain J164_00245 PF01070 FMN-dependent dehydrogenase J164_00246 PF00144 Beta-lactamase J164_00247 PF07730 Histidine kinase J164_00248 PF00072 Response regulator receiver domain J164_00248 PF00196 Bacterial regulatory proteins, luxR family J164_00252 PF00486 Transcriptional regulatory protein, C terminal J164_00252 PF13191 AAA ATPase domain J164_00253 PF07055 Enoyl reductase FAD binding domain J164_00253 PF12241 Trans-2-enoyl-CoA reductase catalytic region J164_00253 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J164_00255 PF00294 pfkB family carbohydrate kinase J164_00256 PF00593 TonB dependent receptor J164_00256 PF07715 TonB-dependent Receptor Plug Domain J164_00257 PF13385 Concanavalin A-like lectin/glucanases superfamily J164_00260 PF13619 J164_00260 J164_00261 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J164_00262 PF01609 Transposase DDE domain J164_00266 PF01527 Transposase J164_00267 PF00665 Integrase core domain J164_00267 PF13276 J164_00267 J164_00268 PF00128 Alpha amylase, catalytic domain J164_00268 PF11896 Domain of unknown function (DUF3416) J164_00269 PF00128 Alpha amylase, catalytic domain J164_00269 PF16657 J164_00269 J164_00270 PF00128 Alpha amylase, catalytic domain J164_00270 PF02806 Alpha amylase, C-terminal all-beta domain J164_00270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J164_00271 PF12850 Calcineurin-like phosphoesterase superfamily domain J164_00272 PF00248 Aldo/keto reductase family J164_00273 PF00135 Carboxylesterase family J164_00274 PF07859 alpha/beta hydrolase fold J164_00276 PF03480 Bacterial extracellular solute-binding protein, family 7 J164_00277 PF04290 J164_00277 J164_00278 PF06808 J164_00278 J164_00279 PF04616 Glycosyl hydrolases family 43 J164_00280 PF00356 Bacterial regulatory proteins, lacI family J164_00280 PF13377 Periplasmic binding protein-like domain J164_00281 PF04962 KduI/IolB family J164_00282 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00283 PF02502 Ribose/Galactose Isomerase J164_00283 PF12408 Ribose-5-phosphate isomerase J164_00284 PF07883 Cupin domain J164_00284 PF13472 GDSL-like Lipase/Acylhydrolase family J164_00285 PF05299 M61 glycyl aminopeptidase J164_00286 PF14300 Domain of unknown function (DUF4375) J164_00287 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J164_00288 PF01037 AsnC family J164_00288 PF13404 AsnC-type helix-turn-helix domain J164_00289 PF00593 TonB dependent receptor J164_00289 PF07715 TonB-dependent Receptor Plug Domain J164_00290 PF01734 Patatin-like phospholipase J164_00291 PF01987 Mitochondrial biogenesis AIM24 J164_00292 PF00005 ABC transporter J164_00293 PF00487 J164_00293 J164_00294 PF13202 EF hand J164_00295 PF00005 ABC transporter J164_00296 PF00528 Binding-protein-dependent transport system inner membrane component J164_00296 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J164_00297 PF00266 Aminotransferase class-V J164_00298 PF03781 Sulfatase-modifying factor enzyme 1 J164_00298 PF12867 DinB superfamily J164_00299 PF10017 J164_00299 J164_00300 PF13657 HipA N-terminal domain J164_00301 PF13560 Helix-turn-helix domain J164_00302 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J164_00304 PF03547 J164_00304 J164_00305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_00306 PF00300 Histidine phosphatase superfamily (branch 1) J164_00307 PF04264 YceI-like domain J164_00308 PF13091 PLD-like domain J164_00309 PF03061 Thioesterase superfamily J164_00310 PF01553 Acyltransferase J164_00311 PF12146 Putative lysophospholipase J164_00313 PF13432 Tetratricopeptide repeat J164_00314 PF01161 Phosphatidylethanolamine-binding protein J164_00315 PF00107 Zinc-binding dehydrogenase J164_00315 PF08240 Alcohol dehydrogenase GroES-like domain J164_00316 PF03724 META domain J164_00316 PF14302 J164_00316 J164_00317 PF02673 J164_00317 J164_00318 PF00120 Glutamine synthetase, catalytic domain J164_00318 PF03951 Glutamine synthetase, beta-Grasp domain J164_00319 PF00543 Nitrogen regulatory protein P-II J164_00320 PF00909 Ammonium Transporter Family J164_00321 PF00512 His Kinase A (phospho-acceptor) domain J164_00321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00322 PF00072 Response regulator receiver domain J164_00322 PF00158 Sigma-54 interaction domain J164_00322 PF02954 Bacterial regulatory protein, Fis family J164_00323 PF00080 Copper/zinc superoxide dismutase (SODC) J164_00324 PF00080 Copper/zinc superoxide dismutase (SODC) J164_00325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_00327 PF00108 Thiolase, N-terminal domain J164_00327 PF02803 Thiolase, C-terminal domain J164_00328 PF07219 J164_00328 J164_00329 PF04375 J164_00329 J164_00330 PF02602 Uroporphyrinogen-III synthase HemD J164_00331 PF01755 J164_00331 J164_00332 PF09500 Putative thioesterase (yiiD_Cterm) J164_00334 PF00581 Rhodanese-like domain J164_00335 PF02556 Preprotein translocase subunit SecB J164_00336 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J164_00336 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J164_00338 PF00205 Thiamine pyrophosphate enzyme, central domain J164_00338 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J164_00338 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J164_00339 PF00512 His Kinase A (phospho-acceptor) domain J164_00339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00340 PF00072 Response regulator receiver domain J164_00340 PF00158 Sigma-54 interaction domain J164_00340 PF02954 Bacterial regulatory protein, Fis family J164_00343 PF07690 Major Facilitator Superfamily J164_00344 PF00588 SpoU rRNA Methylase family J164_00346 PF13698 J164_00346 J164_00347 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J164_00347 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J164_00348 PF02661 Fic/DOC family J164_00348 PF13784 Fic/DOC family N-terminal J164_00349 PF00561 alpha/beta hydrolase fold J164_00350 PF03692 J164_00350 J164_00351 PF00501 AMP-binding enzyme J164_00353 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J164_00354 PF07043 J164_00354 J164_00355 PF01820 D-ala D-ala ligase N-terminus J164_00356 PF02036 SCP-2 sterol transfer family J164_00357 PF03109 J164_00357 J164_00358 PF07883 Cupin domain J164_00359 PF00849 RNA pseudouridylate synthase J164_00360 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) J164_00361 PF00472 RF-1 domain J164_00362 PF01553 Acyltransferase J164_00363 PF01112 Asparaginase J164_00364 PF01432 Peptidase family M3 J164_00365 PF12706 Beta-lactamase superfamily domain J164_00366 PF00440 Bacterial regulatory proteins, tetR family J164_00366 PF14246 AefR-like transcriptional repressor, C-terminal region J164_00367 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_00368 PF12833 Helix-turn-helix domain J164_00369 PF00999 Sodium/hydrogen exchanger family J164_00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00370 PF03466 LysR substrate binding domain J164_00371 PF01274 Malate synthase J164_00372 PF00463 Isocitrate lyase family J164_00373 PF00027 Cyclic nucleotide-binding domain J164_00373 PF00990 GGDEF domain J164_00374 PF13174 Tetratricopeptide repeat J164_00374 PF14559 Tetratricopeptide repeat J164_00376 PF00881 Nitroreductase family J164_00377 PF00326 Prolyl oligopeptidase family J164_00378 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J164_00378 PF00364 Biotin-requiring enzyme J164_00378 PF02785 Biotin carboxylase C-terminal domain J164_00378 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J164_00379 PF01039 Carboxyl transferase domain J164_00380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_00380 PF02770 Acyl-CoA dehydrogenase, middle domain J164_00380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_00381 PF00440 Bacterial regulatory proteins, tetR family J164_00383 PF08808 J164_00383 J164_00384 PF11804 J164_00384 J164_00385 PF03929 J164_00385 J164_00386 PF12365 J164_00386 J164_00388 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J164_00389 PF03372 Endonuclease/Exonuclease/phosphatase family J164_00390 PF03203 J164_00390 J164_00391 PF02492 CobW/HypB/UreG, nucleotide-binding domain J164_00391 PF07683 Cobalamin synthesis protein cobW C-terminal domain J164_00394 PF12146 Putative lysophospholipase J164_00395 PF03969 AFG1-like ATPase J164_00396 PF01047 MarR family J164_00397 PF02566 OsmC-like protein J164_00398 PF12697 Alpha/beta hydrolase family J164_00399 PF11101 J164_00399 J164_00402 PF00107 Zinc-binding dehydrogenase J164_00402 PF16884 J164_00402 J164_00403 PF00248 Aldo/keto reductase family J164_00405 PF00849 RNA pseudouridylate synthase J164_00406 PF00593 TonB dependent receptor J164_00406 PF07715 TonB-dependent Receptor Plug Domain J164_00406 PF13620 Carboxypeptidase regulatory-like domain J164_00408 PF00271 Helicase conserved C-terminal domain J164_00408 PF04408 Helicase associated domain (HA2) J164_00408 PF08482 J164_00408 J164_00409 PF07308 J164_00409 J164_00410 PF00576 HIUase/Transthyretin family J164_00411 PF13738 Pyridine nucleotide-disulphide oxidoreductase J164_00412 PF09349 OHCU decarboxylase J164_00413 PF11533 Protein of unknown function (DUF3225) J164_00414 PF01522 Polysaccharide deacetylase J164_00415 PF00266 Aminotransferase class-V J164_00416 PF01546 Peptidase family M20/M25/M40 J164_00416 PF07687 Peptidase dimerisation domain J164_00417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00417 PF03466 LysR substrate binding domain J164_00418 PF07690 Major Facilitator Superfamily J164_00420 PF01019 Gamma-glutamyltranspeptidase J164_00421 PF01425 Amidase J164_00422 PF01156 Inosine-uridine preferring nucleoside hydrolase J164_00423 PF00962 Adenosine/AMP deaminase J164_00424 PF00860 Permease family J164_00425 PF00111 2Fe-2S iron-sulfur cluster binding domain J164_00425 PF00970 Oxidoreductase FAD-binding domain J164_00426 PF00355 Rieske [2Fe-2S] domain J164_00427 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00427 PF03466 LysR substrate binding domain J164_00428 PF01026 TatD related DNase J164_00431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00431 PF03466 LysR substrate binding domain J164_00432 PF07690 Major Facilitator Superfamily J164_00433 PF13411 MerR HTH family regulatory protein J164_00434 PF12697 Alpha/beta hydrolase family J164_00435 PF02146 Sir2 family J164_00436 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J164_00437 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J164_00437 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J164_00439 PF00551 Formyl transferase J164_00439 PF01842 ACT domain J164_00440 PF00072 Response regulator receiver domain J164_00440 PF00486 Transcriptional regulatory protein, C terminal J164_00441 PF00512 His Kinase A (phospho-acceptor) domain J164_00441 PF00672 HAMP domain J164_00441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00442 PF16576 J164_00442 J164_00443 PF00873 AcrB/AcrD/AcrF family J164_00444 PF02321 Outer membrane efflux protein J164_00446 PF02219 Methylenetetrahydrofolate reductase J164_00447 PF02677 J164_00447 J164_00448 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00448 PF03466 LysR substrate binding domain J164_00449 PF03358 NADPH-dependent FMN reductase J164_00450 PF08908 J164_00450 J164_00451 PF01717 Cobalamin-independent synthase, Catalytic domain J164_00452 PF03812 J164_00452 J164_00453 PF07396 Phosphate-selective porin O and P J164_00454 PF05368 NmrA-like family J164_00455 PF01638 HxlR-like helix-turn-helix J164_00459 PF00665 Integrase core domain J164_00459 PF13276 J164_00459 J164_00460 PF01527 Transposase J164_00461 PF00589 Phage integrase family J164_00462 PF00920 Dehydratase family J164_00463 PF00150 Cellulase (glycosyl hydrolase family 5) J164_00465 PF00132 Bacterial transferase hexapeptide (six repeats) J164_00466 PF07690 Major Facilitator Superfamily J164_00467 PF11871 J164_00467 J164_00467 PF13487 HD domain J164_00468 PF12802 MarR family J164_00469 PF13557 J164_00469 J164_00470 PF00106 short chain dehydrogenase J164_00470 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00471 PF00171 Aldehyde dehydrogenase family J164_00472 PF02311 AraC-like ligand binding domain J164_00472 PF12833 Helix-turn-helix domain J164_00473 PF01494 FAD binding domain J164_00475 PF12680 SnoaL-like domain J164_00476 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J164_00476 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J164_00477 PF00230 Major intrinsic protein J164_00478 PF01266 FAD dependent oxidoreductase J164_00478 PF16901 J164_00478 J164_00479 PF00455 J164_00479 J164_00479 PF08220 DeoR-like helix-turn-helix domain J164_00480 PF00111 2Fe-2S iron-sulfur cluster binding domain J164_00480 PF00175 Oxidoreductase NAD-binding domain J164_00480 PF00970 Oxidoreductase FAD-binding domain J164_00481 PF00355 Rieske [2Fe-2S] domain J164_00482 PF01144 Coenzyme A transferase J164_00483 PF01144 Coenzyme A transferase J164_00484 PF00108 Thiolase, N-terminal domain J164_00484 PF02803 Thiolase, C-terminal domain J164_00485 PF00775 Dioxygenase J164_00485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J164_00486 PF00775 Dioxygenase J164_00487 PF00206 Lyase J164_00487 PF10397 Adenylosuccinate lyase C-terminus J164_00488 PF00561 alpha/beta hydrolase fold J164_00489 PF02627 Carboxymuconolactone decarboxylase family J164_00490 PF12146 Putative lysophospholipase J164_00491 PF01614 Bacterial transcriptional regulator J164_00491 PF09339 IclR helix-turn-helix domain J164_00492 PF01163 RIO1 family J164_00493 PF07859 alpha/beta hydrolase fold J164_00494 PF10677 J164_00494 J164_00495 PF01134 Glucose inhibited division protein A J164_00495 PF13932 GidA associated domain 3 J164_00497 PF00291 Pyridoxal-phosphate dependent enzyme J164_00498 PF02698 DUF218 domain J164_00499 PF12680 SnoaL-like domain J164_00500 PF05118 Aspartyl/Asparaginyl beta-hydroxylase J164_00501 PF08241 Methyltransferase domain J164_00502 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00503 PF12697 Alpha/beta hydrolase family J164_00505 PF00155 Aminotransferase class I and II J164_00506 PF04055 Radical SAM superfamily J164_00506 PF06968 Biotin and Thiamin Synthesis associated domain J164_00507 PF00156 Phosphoribosyl transferase domain J164_00508 PF01040 UbiA prenyltransferase family J164_00512 PF05819 J164_00512 J164_00515 PF05932 Tir chaperone protein (CesT) family J164_00520 PF01313 J164_00520 J164_00521 PF00813 J164_00521 J164_00522 PF01052 Surface presentation of antigens (SPOA) J164_00523 PF09483 J164_00523 J164_00524 PF00771 FHIPEP family J164_00525 PF01312 FlhB HrpN YscU SpaS Family J164_00526 PF09613 J164_00526 J164_00527 PF09487 J164_00527 J164_00528 PF01514 Secretory protein of YscJ/FliF family J164_00529 PF09502 J164_00529 J164_00530 PF02108 J164_00530 J164_00531 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J164_00531 PF02874 ATP synthase alpha/beta family, beta-barrel domain J164_00532 PF09486 J164_00532 J164_00533 PF01311 J164_00533 J164_00534 PF00263 J164_00534 J164_00534 PF03958 Bacterial type II/III secretion system short domain J164_00536 PF01464 Transglycosylase SLT domain J164_00538 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J164_00539 PF00924 Mechanosensitive ion channel J164_00539 PF12607 J164_00539 J164_00540 PF00884 Sulfatase J164_00541 PF03109 J164_00541 J164_00542 PF05661 J164_00542 J164_00543 PF00990 GGDEF domain J164_00544 PF00534 Glycosyl transferases group 1 J164_00544 PF08323 Starch synthase catalytic domain J164_00545 PF00128 Alpha amylase, catalytic domain J164_00545 PF02806 Alpha amylase, C-terminal all-beta domain J164_00545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J164_00546 PF00128 Alpha amylase, catalytic domain J164_00546 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J164_00546 PF11941 Domain of unknown function (DUF3459) J164_00547 PF02446 4-alpha-glucanotransferase J164_00548 PF00128 Alpha amylase, catalytic domain J164_00549 PF11154 J164_00549 J164_00550 PF00128 Alpha amylase, catalytic domain J164_00550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J164_00551 PF13460 NADH(P)-binding J164_00552 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00553 PF00890 FAD binding domain J164_00553 PF13454 FAD-NAD(P)-binding J164_00554 PF06903 J164_00554 J164_00555 PF02321 Outer membrane efflux protein J164_00556 PF00440 Bacterial regulatory proteins, tetR family J164_00557 PF16576 J164_00557 J164_00558 PF00873 AcrB/AcrD/AcrF family J164_00559 PF00106 short chain dehydrogenase J164_00561 PF00270 DEAD/DEAH box helicase J164_00561 PF00271 Helicase conserved C-terminal domain J164_00563 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J164_00563 PF00364 Biotin-requiring enzyme J164_00563 PF02817 e3 binding domain J164_00564 PF07653 Variant SH3 domain J164_00565 PF02779 Transketolase, pyrimidine binding domain J164_00565 PF02780 Transketolase, C-terminal domain J164_00566 PF00676 Dehydrogenase E1 component J164_00567 PF00932 Lamin Tail Domain J164_00567 PF03160 Calx-beta domain J164_00567 PF03372 Endonuclease/Exonuclease/phosphatase family J164_00568 PF03301 Tryptophan 2,3-dioxygenase J164_00569 PF00854 POT family J164_00570 PF13899 Thioredoxin-like J164_00571 PF12802 MarR family J164_00572 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_00572 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal J164_00573 PF04209 homogentisate 1,2-dioxygenase J164_00576 PF03334 J164_00576 J164_00577 PF04066 J164_00577 J164_00578 PF01899 J164_00578 J164_00579 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_00580 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J164_00581 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_00581 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J164_00581 PF04039 J164_00581 J164_00581 PF13244 J164_00581 J164_00582 PF01370 NAD dependent epimerase/dehydratase family J164_00583 PF06127 J164_00583 J164_00584 PF01447 Thermolysin metallopeptidase, catalytic domain J164_00584 PF02868 Thermolysin metallopeptidase, alpha-helical domain J164_00584 PF07504 Fungalysin/Thermolysin Propeptide Motif J164_00585 PF00182 Chitinase class I J164_00585 PF01471 Putative peptidoglycan binding domain J164_00585 PF01551 Peptidase family M23 J164_00589 PF01259 SAICAR synthetase J164_00590 PF00226 DnaJ domain J164_00591 PF13505 Outer membrane protein beta-barrel domain J164_00592 PF00834 Ribulose-phosphate 3 epimerase family J164_00593 PF00583 Acetyltransferase (GNAT) family J164_00594 PF00781 Diacylglycerol kinase catalytic domain J164_00595 PF00425 chorismate binding enzyme J164_00595 PF04715 Anthranilate synthase component I, N terminal region J164_00596 PF01212 Beta-eliminating lyase J164_00597 PF00117 Glutamine amidotransferase class-I J164_00598 PF01613 Flavin reductase like domain J164_00599 PF00591 Glycosyl transferase family, a/b domain J164_00599 PF02885 Glycosyl transferase family, helical bundle domain J164_00600 PF00218 Indole-3-glycerol phosphate synthase J164_00601 PF12710 haloacid dehalogenase-like hydrolase J164_00602 PF00027 Cyclic nucleotide-binding domain J164_00602 PF00325 Bacterial regulatory proteins, crp family J164_00603 PF02675 S-adenosylmethionine decarboxylase J164_00604 PF00893 Small Multidrug Resistance protein J164_00605 PF03232 J164_00605 J164_00606 PF00572 Ribosomal protein L13 J164_00607 PF00380 Ribosomal protein S9/S16 J164_00610 PF00293 NUDIX domain J164_00611 PF00210 Ferritin-like domain J164_00612 PF00072 Response regulator receiver domain J164_00612 PF00512 His Kinase A (phospho-acceptor) domain J164_00612 PF01627 Hpt domain J164_00612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00613 PF00072 Response regulator receiver domain J164_00613 PF00563 EAL domain J164_00613 PF00990 GGDEF domain J164_00614 PF13548 J164_00614 J164_00616 PF04519 J164_00616 J164_00617 PF01521 Iron-sulphur cluster biosynthesis J164_00618 PF03583 Secretory lipase J164_00619 PF01609 Transposase DDE domain J164_00620 PF00293 NUDIX domain J164_00620 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J164_00620 PF09297 NADH pyrophosphatase zinc ribbon domain J164_00621 PF03186 J164_00621 J164_00622 PF10825 J164_00622 J164_00623 PF04505 J164_00623 J164_00624 PF01553 Acyltransferase J164_00624 PF07690 Major Facilitator Superfamily J164_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00625 PF03466 LysR substrate binding domain J164_00626 PF07690 Major Facilitator Superfamily J164_00627 PF12805 J164_00627 J164_00627 PF13515 J164_00627 J164_00628 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J164_00628 PF02843 Phosphoribosylglycinamide synthetase, C domain J164_00628 PF02844 Phosphoribosylglycinamide synthetase, N domain J164_00630 PF01808 AICARFT/IMPCHase bienzyme J164_00630 PF02142 MGS-like domain J164_00631 PF01066 CDP-alcohol phosphatidyltransferase J164_00632 PF12146 Putative lysophospholipase J164_00632 PF12147 J164_00632 J164_00633 PF00782 Dual specificity phosphatase, catalytic domain J164_00633 PF14378 J164_00633 J164_00636 PF01066 CDP-alcohol phosphatidyltransferase J164_00637 PF01553 Acyltransferase J164_00638 PF01148 Cytidylyltransferase family J164_00639 PF02954 Bacterial regulatory protein, Fis family J164_00640 PF11906 J164_00640 J164_00642 PF01381 Helix-turn-helix J164_00644 PF06325 Ribosomal protein L11 methyltransferase (PrmA) J164_00647 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J164_00647 PF02785 Biotin carboxylase C-terminal domain J164_00647 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J164_00648 PF05635 23S rRNA-intervening sequence protein J164_00649 PF00364 Biotin-requiring enzyme J164_00650 PF01220 Dehydroquinase class II J164_00651 PF02683 J164_00651 J164_00651 PF11412 Disulphide bond corrector protein DsbC J164_00651 PF13899 Thioredoxin-like J164_00652 PF03091 CutA1 divalent ion tolerance protein J164_00653 PF12625 J164_00653 J164_00653 PF12833 Helix-turn-helix domain J164_00655 PF01852 START domain J164_00657 PF00106 short chain dehydrogenase J164_00658 PF00932 Lamin Tail Domain J164_00658 PF04231 Endonuclease I J164_00658 PF13205 Bacterial Ig-like domain J164_00659 PF00166 Chaperonin 10 Kd subunit J164_00660 PF00118 TCP-1/cpn60 chaperonin family J164_00662 PF00593 TonB dependent receptor J164_00662 PF07715 TonB-dependent Receptor Plug Domain J164_00663 PF00793 DAHP synthetase I family J164_00666 PF08450 SMP-30/Gluconolaconase/LRE-like region J164_00668 PF03710 Glutamate-ammonia ligase adenylyltransferase J164_00668 PF08335 GlnD PII-uridylyltransferase J164_00669 PF02592 J164_00669 J164_00670 PF00082 Subtilase family J164_00670 PF09286 Pro-kumamolisin, activation domain J164_00671 PF06258 J164_00671 J164_00672 PF00881 Nitroreductase family J164_00673 PF04264 YceI-like domain J164_00674 PF00328 Histidine phosphatase superfamily (branch 2) J164_00675 PF04954 Siderophore-interacting protein J164_00675 PF08021 Siderophore-interacting FAD-binding domain J164_00676 PF03551 Transcriptional regulator PadR-like family J164_00677 PF16957 J164_00677 J164_00678 PF06857 J164_00678 J164_00679 PF01039 Carboxyl transferase domain J164_00680 PF06833 Malonate decarboxylase gamma subunit (MdcE) J164_00681 PF10620 J164_00681 J164_00682 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J164_00684 PF00698 Acyl transferase domain J164_00685 PF03600 Citrate transporter J164_00685 PF07158 J164_00685 J164_00686 PF00392 Bacterial regulatory proteins, gntR family J164_00686 PF07729 FCD domain J164_00687 PF13419 Haloacid dehalogenase-like hydrolase J164_00688 PF01740 STAS domain J164_00689 PF13581 Histidine kinase-like ATPase domain J164_00690 PF00672 HAMP domain J164_00690 PF02743 Cache domain J164_00690 PF07228 Stage II sporulation protein E (SpoIIE) J164_00692 PF01764 Lipase (class 3) J164_00693 PF07745 Glycosyl hydrolase family 53 J164_00694 PF00456 Transketolase, thiamine diphosphate binding domain J164_00695 PF00665 Integrase core domain J164_00695 PF13276 J164_00695 J164_00696 PF01527 Transposase J164_00697 PF00106 short chain dehydrogenase J164_00698 PF12833 Helix-turn-helix domain J164_00698 PF12852 Cupin J164_00700 PF00106 short chain dehydrogenase J164_00700 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00701 PF01145 SPFH domain / Band 7 family J164_00702 PF13409 Glutathione S-transferase, N-terminal domain J164_00702 PF13410 Glutathione S-transferase, C-terminal domain J164_00703 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_00704 PF13548 J164_00704 J164_00706 PF05708 Orthopoxvirus protein of unknown function (DUF830) J164_00707 PF12823 J164_00707 J164_00708 PF00326 Prolyl oligopeptidase family J164_00708 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J164_00709 PF07759 J164_00709 J164_00710 PF00990 GGDEF domain J164_00713 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J164_00714 PF00892 EamA-like transporter family J164_00715 PF00497 Bacterial extracellular solute-binding proteins, family 3 J164_00718 PF00324 Amino acid permease J164_00720 PF01544 CorA-like Mg2+ transporter protein J164_00721 PF01987 Mitochondrial biogenesis AIM24 J164_00722 PF01204 Trehalase J164_00723 PF01904 Protein of unknown function DUF72 J164_00724 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J164_00724 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J164_00726 PF01590 GAF domain J164_00728 PF00675 Insulinase (Peptidase family M16) J164_00728 PF05193 Peptidase M16 inactive domain J164_00729 PF00990 GGDEF domain J164_00729 PF01590 GAF domain J164_00729 PF08447 PAS fold J164_00729 PF08448 PAS fold J164_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_00730 PF00672 HAMP domain J164_00730 PF17200 J164_00730 J164_00731 PF00150 Cellulase (glycosyl hydrolase family 5) J164_00731 PF00553 Cellulose binding domain J164_00732 PF00916 J164_00732 J164_00732 PF01740 STAS domain J164_00733 PF00990 GGDEF domain J164_00734 PF02225 PA domain J164_00734 PF04389 Peptidase family M28 J164_00736 PF13632 Glycosyl transferase family group 2 J164_00737 PF02230 Phospholipase/Carboxylesterase J164_00738 PF06580 J164_00738 J164_00739 PF00072 Response regulator receiver domain J164_00739 PF04397 LytTr DNA-binding domain J164_00740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J164_00740 PF03900 Porphobilinogen deaminase, C-terminal domain J164_00741 PF04338 Protein of unknown function, DUF481 J164_00742 PF08279 HTH domain J164_00742 PF13280 J164_00742 J164_00743 PF08212 Lipocalin-like domain J164_00745 PF00326 Prolyl oligopeptidase family J164_00745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J164_00747 PF00155 Aminotransferase class I and II J164_00748 PF00326 Prolyl oligopeptidase family J164_00748 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J164_00749 PF04304 J164_00749 J164_00750 PF13627 J164_00750 J164_00751 PF01678 Diaminopimelate epimerase J164_00752 PF04340 Protein of unknown function, DUF484 J164_00753 PF00589 Phage integrase family J164_00753 PF02899 Phage integrase, N-terminal SAM-like domain J164_00754 PF00227 Proteasome subunit J164_00755 PF00004 ATPase family associated with various cellular activities (AAA) J164_00755 PF07724 AAA domain (Cdc48 subfamily) J164_00755 PF10431 C-terminal, D2-small domain, of ClpB protein J164_00756 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J164_00757 PF13673 Acetyltransferase (GNAT) domain J164_00758 PF16576 J164_00758 J164_00759 PF07690 Major Facilitator Superfamily J164_00760 PF01209 ubiE/COQ5 methyltransferase family J164_00761 PF00990 GGDEF domain J164_00762 PF01433 Peptidase family M1 J164_00762 PF09127 Leukotriene A4 hydrolase, C-terminal J164_00764 PF00702 haloacid dehalogenase-like hydrolase J164_00765 PF13360 PQQ-like domain J164_00765 PF13570 PQQ-like domain J164_00766 PF00497 Bacterial extracellular solute-binding proteins, family 3 J164_00766 PF12796 Ankyrin repeats (3 copies) J164_00766 PF13857 Ankyrin repeats (many copies) J164_00767 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J164_00768 PF10282 Lactonase, 7-bladed beta-propeller J164_00769 PF00107 Zinc-binding dehydrogenase J164_00769 PF08240 Alcohol dehydrogenase GroES-like domain J164_00770 PF00593 TonB dependent receptor J164_00770 PF07715 TonB-dependent Receptor Plug Domain J164_00771 PF00158 Sigma-54 interaction domain J164_00771 PF01590 GAF domain J164_00771 PF02954 Bacterial regulatory protein, Fis family J164_00772 PF00294 pfkB family carbohydrate kinase J164_00773 PF06723 MreB/Mbl protein J164_00774 PF04085 rod shape-determining protein MreC J164_00775 PF04093 J164_00775 J164_00776 PF00905 Penicillin binding protein transpeptidase domain J164_00776 PF03717 Penicillin-binding Protein dimerisation domain J164_00777 PF01098 J164_00777 J164_00778 PF00295 Glycosyl hydrolases family 28 J164_00779 PF13406 Transglycosylase SLT domain J164_00780 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel J164_00780 PF05036 Sporulation related domain J164_00781 PF00768 D-alanyl-D-alanine carboxypeptidase J164_00781 PF07943 Penicillin-binding protein 5, C-terminal domain J164_00782 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) J164_00783 PF04359 Protein of unknown function (DUF493) J164_00784 PF03099 Biotin/lipoate A/B protein ligase family J164_00785 PF04055 Radical SAM superfamily J164_00785 PF16881 J164_00785 J164_00786 PF00595 PDZ domain (Also known as DHR or GLGF) J164_00786 PF03572 Peptidase family S41 J164_00786 PF11818 J164_00786 J164_00787 PF01925 J164_00787 J164_00788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_00788 PF03466 LysR substrate binding domain J164_00789 PF03372 Endonuclease/Exonuclease/phosphatase family J164_00790 PF00293 NUDIX domain J164_00790 PF01467 Cytidylyltransferase J164_00791 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J164_00793 PF01555 DNA methylase J164_00794 PF10001 J164_00794 J164_00795 PF05433 J164_00795 J164_00797 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J164_00797 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J164_00798 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J164_00798 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J164_00799 PF04972 BON domain J164_00800 PF00512 His Kinase A (phospho-acceptor) domain J164_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00800 PF05227 CHASE3 domain J164_00800 PF13188 PAS domain J164_00801 PF00072 Response regulator receiver domain J164_00802 PF00072 Response regulator receiver domain J164_00802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00803 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J164_00804 PF13561 Enoyl-(Acyl carrier protein) reductase J164_00805 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase J164_00807 PF00593 TonB dependent receptor J164_00807 PF07715 TonB-dependent Receptor Plug Domain J164_00808 PF13640 2OG-Fe(II) oxygenase superfamily J164_00810 PF00593 TonB dependent receptor J164_00810 PF07715 TonB-dependent Receptor Plug Domain J164_00811 PF11356 Type IV pilus biogenesis J164_00811 PF13180 PDZ domain J164_00812 PF00263 J164_00812 J164_00812 PF03958 Bacterial type II/III secretion system short domain J164_00813 PF00437 Type II/IV secretion system protein J164_00814 PF00482 Type II secretion system (T2SS), protein F J164_00815 PF07963 Prokaryotic N-terminal methylation motif J164_00815 PF08334 Type II secretion system (T2SS), protein G J164_00816 PF07963 Prokaryotic N-terminal methylation motif J164_00816 PF12019 Type II transport protein GspH J164_00817 PF02501 Type II secretion system (T2SS), protein I J164_00818 PF07963 Prokaryotic N-terminal methylation motif J164_00818 PF11612 Type II secretion system (T2SS), protein J J164_00819 PF03934 Type II secretion system (T2SS), protein K J164_00820 PF05134 Type II secretion system (T2SS), protein L J164_00821 PF04612 Type II secretion system (T2SS), protein M J164_00822 PF01203 J164_00822 J164_00823 PF00593 TonB dependent receptor J164_00823 PF07715 TonB-dependent Receptor Plug Domain J164_00824 PF02837 Glycosyl hydrolases family 2, sugar binding domain J164_00825 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J164_00825 PF16355 J164_00825 J164_00826 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain J164_00826 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain J164_00826 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain J164_00828 PF07786 J164_00828 J164_00829 PF00392 Bacterial regulatory proteins, gntR family J164_00829 PF07702 UTRA domain J164_00830 PF07690 Major Facilitator Superfamily J164_00831 PF00356 Bacterial regulatory proteins, lacI family J164_00831 PF13377 Periplasmic binding protein-like domain J164_00832 PF01380 SIS domain J164_00833 PF01979 Amidohydrolase family J164_00834 PF00593 TonB dependent receptor J164_00834 PF07715 TonB-dependent Receptor Plug Domain J164_00835 PF01743 Poly A polymerase head domain J164_00835 PF01966 HD domain J164_00835 PF12627 Probable RNA and SrmB- binding site of polymerase A J164_00836 PF00732 GMC oxidoreductase J164_00836 PF05199 GMC oxidoreductase J164_00837 PF00171 Aldehyde dehydrogenase family J164_00838 PF02028 BCCT family transporter J164_00839 PF03372 Endonuclease/Exonuclease/phosphatase family J164_00840 PF01323 DSBA-like thioredoxin domain J164_00841 PF13462 Thioredoxin J164_00843 PF00034 Cytochrome c J164_00844 PF01926 50S ribosome-binding GTPase J164_00845 PF00753 Metallo-beta-lactamase superfamily J164_00846 PF12833 Helix-turn-helix domain J164_00847 PF04107 Glutamate-cysteine ligase family 2(GCS2) J164_00848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00849 PF00072 Response regulator receiver domain J164_00849 PF00486 Transcriptional regulatory protein, C terminal J164_00850 PF00534 Glycosyl transferases group 1 J164_00852 PF02583 Metal-sensitive transcriptional repressor J164_00853 PF00107 Zinc-binding dehydrogenase J164_00853 PF08240 Alcohol dehydrogenase GroES-like domain J164_00854 PF04828 Glutathione-dependent formaldehyde-activating enzyme J164_00855 PF00756 Putative esterase J164_00856 PF00155 Aminotransferase class I and II J164_00856 PF00392 Bacterial regulatory proteins, gntR family J164_00857 PF02567 Phenazine biosynthesis-like protein J164_00858 PF00892 EamA-like transporter family J164_00860 PF00005 ABC transporter J164_00860 PF12848 ABC transporter J164_00861 PF11776 Domain of unknown function (DUF3315) J164_00862 PF00464 Serine hydroxymethyltransferase J164_00863 PF03477 ATP cone domain J164_00864 PF00583 Acetyltransferase (GNAT) family J164_00865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J164_00865 PF01872 RibD C-terminal domain J164_00868 PF00677 Lumazine binding domain J164_00869 PF00925 GTP cyclohydrolase II J164_00869 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J164_00870 PF00885 6,7-dimethyl-8-ribityllumazine synthase J164_00871 PF01029 NusB family J164_00872 PF00586 AIR synthase related protein, N-terminal domain J164_00872 PF02769 AIR synthase related protein, C-terminal domain J164_00873 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J164_00873 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J164_00874 PF00646 F-box domain J164_00875 PF09604 J164_00875 J164_00876 PF03814 J164_00876 J164_00877 PF00122 E1-E2 ATPase J164_00877 PF00702 haloacid dehalogenase-like hydrolase J164_00878 PF02669 J164_00878 J164_00879 PF00512 His Kinase A (phospho-acceptor) domain J164_00879 PF00582 Universal stress protein family J164_00879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00879 PF02702 Osmosensitive K+ channel His kinase sensor domain J164_00879 PF13493 Domain of unknown function (DUF4118) J164_00880 PF00072 Response regulator receiver domain J164_00880 PF00486 Transcriptional regulatory protein, C terminal J164_00883 PF01565 FAD binding domain J164_00883 PF02913 FAD linked oxidases, C-terminal domain J164_00884 PF04307 J164_00884 J164_00885 PF02021 Uncharacterised protein family UPF0102 J164_00886 PF04348 LppC putative lipoprotein J164_00887 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J164_00890 PF07362 Post-segregation antitoxin CcdA J164_00891 PF05742 J164_00891 J164_00892 PF02381 MraZ protein J164_00893 PF01795 MraW methylase family J164_00894 PF04999 J164_00894 J164_00895 PF00905 Penicillin binding protein transpeptidase domain J164_00895 PF03717 Penicillin-binding Protein dimerisation domain J164_00896 PF01225 Mur ligase family, catalytic domain J164_00896 PF02875 Mur ligase family, glutamate ligase domain J164_00896 PF08245 Mur ligase middle domain J164_00897 PF01225 Mur ligase family, catalytic domain J164_00897 PF02875 Mur ligase family, glutamate ligase domain J164_00897 PF08245 Mur ligase middle domain J164_00898 PF00953 Glycosyl transferase family 4 J164_00899 PF01098 J164_00899 J164_00900 PF03033 Glycosyltransferase family 28 N-terminal domain J164_00900 PF04101 Glycosyltransferase family 28 C-terminal domain J164_00901 PF01225 Mur ligase family, catalytic domain J164_00901 PF02875 Mur ligase family, glutamate ligase domain J164_00901 PF08245 Mur ligase middle domain J164_00902 PF01820 D-ala D-ala ligase N-terminus J164_00902 PF07478 D-ala D-ala ligase C-terminus J164_00903 PF03799 Cell division protein FtsQ J164_00903 PF08478 POTRA domain, FtsQ-type J164_00904 PF02491 SHS2 domain inserted in FTSA J164_00904 PF14450 Cell division protein FtsA J164_00905 PF00091 Tubulin/FtsZ family, GTPase domain J164_00905 PF12327 FtsZ family, C-terminal domain J164_00906 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J164_00907 PF05258 J164_00907 J164_00908 PF01551 Peptidase family M23 J164_00909 PF01043 SecA preprotein cross-linking domain J164_00909 PF02810 SEC-C motif J164_00909 PF07516 SecA Wing and Scaffold domain J164_00909 PF07517 SecA DEAD-like domain J164_00910 PF00293 NUDIX domain J164_00910 PF02581 Thiamine monophosphate synthase/TENI J164_00912 PF02219 Methylenetetrahydrofolate reductase J164_00913 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J164_00915 PF08240 Alcohol dehydrogenase GroES-like domain J164_00915 PF13602 Zinc-binding dehydrogenase J164_00916 PF00082 Subtilase family J164_00916 PF09286 Pro-kumamolisin, activation domain J164_00918 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J164_00919 PF00128 Alpha amylase, catalytic domain J164_00920 PF09831 J164_00920 J164_00921 PF11539 Protein of unknown function (DUF3228) J164_00924 PF00685 Sulfotransferase domain J164_00925 PF13649 Methyltransferase domain J164_00926 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J164_00926 PF05221 S-adenosyl-L-homocysteine hydrolase J164_00928 PF00326 Prolyl oligopeptidase family J164_00929 PF00311 Phosphoenolpyruvate carboxylase J164_00930 PF00440 Bacterial regulatory proteins, tetR family J164_00931 PF13387 J164_00931 J164_00933 PF00593 TonB dependent receptor J164_00933 PF07715 TonB-dependent Receptor Plug Domain J164_00934 PF00328 Histidine phosphatase superfamily (branch 2) J164_00935 PF00438 S-adenosylmethionine synthetase, N-terminal domain J164_00935 PF02772 S-adenosylmethionine synthetase, central domain J164_00935 PF02773 S-adenosylmethionine synthetase, C-terminal domain J164_00936 PF04307 J164_00936 J164_00937 PF08241 Methyltransferase domain J164_00938 PF01207 Dihydrouridine synthase (Dus) J164_00939 PF08306 Glycosyl hydrolase family 98 J164_00939 PF08307 Glycosyl hydrolase family 98 C-terminal domain J164_00939 PF16990 J164_00939 J164_00941 PF00294 pfkB family carbohydrate kinase J164_00942 PF01773 Na+ dependent nucleoside transporter N-terminus J164_00942 PF07662 Na+ dependent nucleoside transporter C-terminus J164_00942 PF07670 Nucleoside recognition J164_00943 PF00248 Aldo/keto reductase family J164_00944 PF10636 Hemin uptake protein hemP J164_00945 PF00593 TonB dependent receptor J164_00945 PF07715 TonB-dependent Receptor Plug Domain J164_00949 PF04342 J164_00949 J164_00950 PF00528 Binding-protein-dependent transport system inner membrane component J164_00951 PF00005 ABC transporter J164_00952 PF13379 NMT1-like family J164_00953 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J164_00954 PF02687 J164_00954 J164_00955 PF00005 ABC transporter J164_00956 PF13472 GDSL-like Lipase/Acylhydrolase family J164_00957 PF00072 Response regulator receiver domain J164_00957 PF00486 Transcriptional regulatory protein, C terminal J164_00958 PF00512 His Kinase A (phospho-acceptor) domain J164_00958 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_00959 PF13472 GDSL-like Lipase/Acylhydrolase family J164_00960 PF01219 Prokaryotic diacylglycerol kinase J164_00961 PF04011 LemA family J164_00962 PF04536 TLP18 J164_00963 PF04536 TLP18 J164_00964 PF01790 J164_00964 J164_00965 PF00303 Thymidylate synthase J164_00967 PF00186 Dihydrofolate reductase J164_00968 PF00158 Sigma-54 interaction domain J164_00969 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_00969 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J164_00970 PF00005 ABC transporter J164_00971 PF00528 Binding-protein-dependent transport system inner membrane component J164_00972 PF09084 NMT1/THI5 like J164_00973 PF00296 Luciferase-like monooxygenase J164_00974 PF03358 NADPH-dependent FMN reductase J164_00975 PF00593 TonB dependent receptor J164_00975 PF07715 TonB-dependent Receptor Plug Domain J164_00977 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J164_00978 PF00296 Luciferase-like monooxygenase J164_00979 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J164_00980 PF00528 Binding-protein-dependent transport system inner membrane component J164_00981 PF00528 Binding-protein-dependent transport system inner membrane component J164_00983 PF00005 ABC transporter J164_00983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J164_00984 PF00149 Calcineurin-like phosphoesterase J164_00985 PF04379 Protein of unknown function (DUF525) J164_00986 PF00398 Ribosomal RNA adenine dimethylase J164_00987 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J164_00988 PF00639 PPIC-type PPIASE domain J164_00988 PF09312 SurA N-terminal domain J164_00988 PF13616 PPIC-type PPIASE domain J164_00989 PF03968 OstA-like protein J164_00989 PF04453 Organic solvent tolerance protein J164_00990 PF00850 Histone deacetylase domain J164_00991 PF01453 D-mannose binding lectin J164_00992 PF00850 Histone deacetylase domain J164_00993 PF01923 Cobalamin adenosyltransferase J164_00995 PF01494 FAD binding domain J164_00996 PF01494 FAD binding domain J164_00997 PF12697 Alpha/beta hydrolase family J164_00998 PF13577 SnoaL-like domain J164_00999 PF13557 J164_00999 J164_01000 PF00392 Bacterial regulatory proteins, gntR family J164_01000 PF07729 FCD domain J164_01001 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J164_01002 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J164_01003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01003 PF03466 LysR substrate binding domain J164_01004 PF00501 AMP-binding enzyme J164_01004 PF13193 AMP-binding enzyme C-terminal domain J164_01005 PF00171 Aldehyde dehydrogenase family J164_01006 PF00378 Enoyl-CoA hydratase/isomerase family J164_01007 PF12802 MarR family J164_01008 PF13202 EF hand J164_01010 PF08450 SMP-30/Gluconolaconase/LRE-like region J164_01011 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J164_01012 PF01728 FtsJ-like methyltransferase J164_01013 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J164_01016 PF00749 tRNA synthetases class I (E and Q), catalytic domain J164_01016 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J164_01017 PF13409 Glutathione S-transferase, N-terminal domain J164_01018 PF09413 Domain of unknown function (DUF2007) J164_01019 PF00072 Response regulator receiver domain J164_01020 PF00072 Response regulator receiver domain J164_01020 PF00512 His Kinase A (phospho-acceptor) domain J164_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01020 PF05227 CHASE3 domain J164_01021 PF00196 Bacterial regulatory proteins, luxR family J164_01022 PF08332 Calcium/calmodulin dependent protein kinase II Association J164_01023 PF01625 Peptide methionine sulfoxide reductase J164_01024 PF01965 DJ-1/PfpI family J164_01025 PF00923 Transaldolase J164_01026 PF01272 Transcription elongation factor, GreA/GreB, C-term J164_01026 PF14760 Rnk N-terminus J164_01027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01027 PF03466 LysR substrate binding domain J164_01028 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_01028 PF13192 Thioredoxin domain J164_01029 PF00578 AhpC/TSA family J164_01029 PF10417 C-terminal domain of 1-Cys peroxiredoxin J164_01030 PF05175 Methyltransferase small domain J164_01031 PF00561 alpha/beta hydrolase fold J164_01032 PF05013 N-formylglutamate amidohydrolase J164_01033 PF00293 NUDIX domain J164_01034 PF01367 5'-3' exonuclease, C-terminal SAM fold J164_01034 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J164_01035 PF00881 Nitroreductase family J164_01036 PF07793 J164_01036 J164_01037 PF07793 J164_01037 J164_01038 PF12146 Putative lysophospholipase J164_01039 PF00440 Bacterial regulatory proteins, tetR family J164_01039 PF13305 WHG domain J164_01040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J164_01040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J164_01041 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J164_01042 PF11304 J164_01042 J164_01044 PF04542 Sigma-70 region 2 J164_01044 PF08281 Sigma-70, region 4 J164_01045 PF12769 Domain of unknown function (DUF3814) J164_01046 PF02233 NAD(P) transhydrogenase beta subunit J164_01048 PF01883 Domain of unknown function DUF59 J164_01049 PF01063 Aminotransferase class IV J164_01050 PF00082 Subtilase family J164_01050 PF04151 Bacterial pre-peptidase C-terminal domain J164_01051 PF00082 Subtilase family J164_01052 PF00082 Subtilase family J164_01052 PF04151 Bacterial pre-peptidase C-terminal domain J164_01053 PF04073 Aminoacyl-tRNA editing domain J164_01054 PF00710 Asparaginase J164_01055 PF02055 O-Glycosyl hydrolase family 30 J164_01056 PF17189 J164_01056 J164_01057 PF09842 J164_01057 J164_01058 PF03358 NADPH-dependent FMN reductase J164_01059 PF03631 J164_01059 J164_01060 PF00578 AhpC/TSA family J164_01061 PF00708 Acylphosphatase J164_01063 PF03976 Polyphosphate kinase 2 (PPK2) J164_01064 PF00994 Probable molybdopterin binding domain J164_01065 PF13844 Glycosyl transferase family 41 J164_01065 PF14559 Tetratricopeptide repeat J164_01066 PF00472 RF-1 domain J164_01066 PF03462 PCRF domain J164_01067 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J164_01067 PF01488 Shikimate / quinate 5-dehydrogenase J164_01067 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J164_01068 PF13429 Tetratricopeptide repeat J164_01069 PF03550 Outer membrane lipoprotein LolB J164_01070 PF00288 GHMP kinases N terminal domain J164_01070 PF08544 GHMP kinases C terminal J164_01072 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J164_01072 PF14572 Phosphoribosyl synthetase-associated domain J164_01073 PF01386 Ribosomal L25p family J164_01073 PF14693 Ribosomal protein TL5, C-terminal domain J164_01074 PF01195 Peptidyl-tRNA hydrolase J164_01075 PF01926 50S ribosome-binding GTPase J164_01075 PF06071 Protein of unknown function (DUF933) J164_01079 PF00009 Elongation factor Tu GTP binding domain J164_01079 PF03143 Elongation factor Tu C-terminal domain J164_01079 PF03144 Elongation factor Tu domain 2 J164_01081 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J164_01082 PF00467 KOW motif J164_01082 PF02357 Transcription termination factor nusG J164_01083 PF00298 Ribosomal protein L11, RNA binding domain J164_01083 PF03946 Ribosomal protein L11, N-terminal domain J164_01084 PF00687 Ribosomal protein L1p/L10e family J164_01085 PF00466 Ribosomal protein L10 J164_01086 PF00542 Ribosomal protein L7/L12 C-terminal domain J164_01086 PF16320 J164_01086 J164_01088 PF00562 RNA polymerase Rpb2, domain 6 J164_01088 PF04560 RNA polymerase Rpb2, domain 7 J164_01088 PF04561 RNA polymerase Rpb2, domain 2 J164_01088 PF04563 RNA polymerase beta subunit J164_01088 PF04565 RNA polymerase Rpb2, domain 3 J164_01088 PF10385 RNA polymerase beta subunit external 1 domain J164_01089 PF00623 RNA polymerase Rpb1, domain 2 J164_01089 PF04983 RNA polymerase Rpb1, domain 3 J164_01089 PF04997 RNA polymerase Rpb1, domain 1 J164_01089 PF04998 RNA polymerase Rpb1, domain 5 J164_01089 PF05000 RNA polymerase Rpb1, domain 4 J164_01090 PF00164 Ribosomal protein S12/S23 J164_01091 PF00177 Ribosomal protein S7p/S5e J164_01092 PF00009 Elongation factor Tu GTP binding domain J164_01092 PF00679 Elongation factor G C-terminus J164_01092 PF03144 Elongation factor Tu domain 2 J164_01092 PF03764 Elongation factor G, domain IV J164_01092 PF14492 Elongation Factor G, domain II J164_01093 PF00009 Elongation factor Tu GTP binding domain J164_01093 PF03143 Elongation factor Tu C-terminal domain J164_01093 PF03144 Elongation factor Tu domain 2 J164_01094 PF00338 Ribosomal protein S10p/S20e J164_01095 PF00297 Ribosomal protein L3 J164_01096 PF00573 Ribosomal protein L4/L1 family J164_01097 PF00276 Ribosomal protein L23 J164_01098 PF00181 Ribosomal Proteins L2, RNA binding domain J164_01098 PF03947 Ribosomal Proteins L2, C-terminal domain J164_01099 PF00203 Ribosomal protein S19 J164_01100 PF00237 Ribosomal protein L22p/L17e J164_01101 PF00189 Ribosomal protein S3, C-terminal domain J164_01101 PF07650 KH domain J164_01102 PF00252 Ribosomal protein L16p/L10e J164_01103 PF00831 Ribosomal L29 protein J164_01104 PF00366 Ribosomal protein S17 J164_01105 PF00238 Ribosomal protein L14p/L23e J164_01106 PF00467 KOW motif J164_01106 PF17136 J164_01106 J164_01107 PF00281 Ribosomal protein L5 J164_01107 PF00673 ribosomal L5P family C-terminus J164_01108 PF00253 Ribosomal protein S14p/S29e J164_01109 PF00410 Ribosomal protein S8 J164_01110 PF00347 Ribosomal protein L6 J164_01111 PF00861 Ribosomal L18p/L5e family J164_01112 PF00333 Ribosomal protein S5, N-terminal domain J164_01112 PF03719 Ribosomal protein S5, C-terminal domain J164_01113 PF00327 Ribosomal protein L30p/L7e J164_01114 PF00828 Ribosomal protein L18e/L15 J164_01115 PF00344 SecY translocase J164_01116 PF00416 Ribosomal protein S13/S18 J164_01117 PF00411 Ribosomal protein S11 J164_01118 PF00163 Ribosomal protein S4/S9 N-terminal domain J164_01118 PF01479 S4 domain J164_01119 PF01000 RNA polymerase Rpb3/RpoA insert domain J164_01119 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J164_01119 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J164_01120 PF01196 Ribosomal protein L17 J164_01121 PF02600 Disulfide bond formation protein DsbB J164_01122 PF00593 TonB dependent receptor J164_01122 PF07715 TonB-dependent Receptor Plug Domain J164_01123 PF01474 Class-II DAHP synthetase family J164_01124 PF00924 Mechanosensitive ion channel J164_01125 PF01425 Amidase J164_01126 PF09900 J164_01126 J164_01127 PF00009 Elongation factor Tu GTP binding domain J164_01127 PF00679 Elongation factor G C-terminus J164_01127 PF03144 Elongation factor Tu domain 2 J164_01128 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J164_01129 PF00056 lactate/malate dehydrogenase, NAD binding domain J164_01129 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J164_01130 PF00043 Glutathione S-transferase, C-terminal domain J164_01130 PF02798 Glutathione S-transferase, N-terminal domain J164_01131 PF07486 Cell Wall Hydrolase J164_01132 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J164_01132 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_01133 PF08240 Alcohol dehydrogenase GroES-like domain J164_01133 PF13602 Zinc-binding dehydrogenase J164_01134 PF00691 OmpA family J164_01134 PF13505 Outer membrane protein beta-barrel domain J164_01136 PF00849 RNA pseudouridylate synthase J164_01136 PF01479 S4 domain J164_01138 PF00155 Aminotransferase class I and II J164_01139 PF13531 Bacterial extracellular solute-binding protein J164_01140 PF00528 Binding-protein-dependent transport system inner membrane component J164_01141 PF00528 Binding-protein-dependent transport system inner membrane component J164_01142 PF00005 ABC transporter J164_01142 PF12857 J164_01142 J164_01143 PF09694 J164_01143 J164_01144 PF00107 Zinc-binding dehydrogenase J164_01144 PF08240 Alcohol dehydrogenase GroES-like domain J164_01145 PF00593 TonB dependent receptor J164_01145 PF07715 TonB-dependent Receptor Plug Domain J164_01146 PF04185 Phosphoesterase family J164_01146 PF05506 J164_01146 J164_01147 PF10459 Peptidase S46 J164_01148 PF10459 Peptidase S46 J164_01149 PF00300 Histidine phosphatase superfamily (branch 1) J164_01150 PF08245 Mur ligase middle domain J164_01151 PF05036 Sporulation related domain J164_01152 PF02674 J164_01152 J164_01153 PF13522 Glutamine amidotransferase domain J164_01154 PF04305 J164_01154 J164_01156 PF13688 Metallo-peptidase family M12 J164_01158 PF00149 Calcineurin-like phosphoesterase J164_01160 PF01569 PAP2 superfamily J164_01161 PF00534 Glycosyl transferases group 1 J164_01161 PF13439 Glycosyltransferase Family 4 J164_01162 PF02541 Ppx/GppA phosphatase family J164_01163 PF02503 Polyphosphate kinase middle domain J164_01163 PF13089 Polyphosphate kinase N-terminal domain J164_01163 PF13090 Polyphosphate kinase C-terminal domain J164_01164 PF00512 His Kinase A (phospho-acceptor) domain J164_01164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01164 PF11808 J164_01164 J164_01165 PF00072 Response regulator receiver domain J164_01165 PF00486 Transcriptional regulatory protein, C terminal J164_01166 PF01435 Peptidase family M48 J164_01167 PF00462 Glutaredoxin J164_01168 PF02627 Carboxymuconolactone decarboxylase family J164_01169 PF00180 Isocitrate/isopropylmalate dehydrogenase J164_01170 PF12811 J164_01170 J164_01175 PF00665 Integrase core domain J164_01175 PF13276 J164_01175 J164_01176 PF01527 Transposase J164_01183 PF07275 Antirestriction protein (ArdA) J164_01190 PF00959 Phage lysozyme J164_01195 PF04550 J164_01195 J164_01199 PF01527 Transposase J164_01200 PF00665 Integrase core domain J164_01200 PF13276 J164_01200 J164_01201 PF14700 DNA-directed RNA polymerase N-terminal J164_01203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01204 PF08448 PAS fold J164_01206 PF05697 Bacterial trigger factor protein (TF) J164_01206 PF05698 Bacterial trigger factor protein (TF) C-terminus J164_01207 PF00574 Clp protease J164_01208 PF06689 ClpX C4-type zinc finger J164_01208 PF07724 AAA domain (Cdc48 subfamily) J164_01208 PF10431 C-terminal, D2-small domain, of ClpB protein J164_01209 PF00004 ATPase family associated with various cellular activities (AAA) J164_01209 PF02190 ATP-dependent protease La (LON) domain J164_01209 PF05362 Lon protease (S16) C-terminal proteolytic domain J164_01210 PF00216 Bacterial DNA-binding protein J164_01214 PF13145 PPIC-type PPIASE domain J164_01214 PF13616 PPIC-type PPIASE domain J164_01214 PF13623 J164_01214 J164_01216 PF01464 Transglycosylase SLT domain J164_01216 PF01476 LysM domain J164_01217 PF00753 Metallo-beta-lactamase superfamily J164_01217 PF16123 J164_01217 J164_01219 PF00075 RNase H J164_01220 PF00929 Exonuclease J164_01221 PF13672 Protein phosphatase 2C J164_01224 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J164_01225 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family J164_01226 PF12706 Beta-lactamase superfamily domain J164_01227 PF04055 Radical SAM superfamily J164_01227 PF06463 Molybdenum Cofactor Synthesis C J164_01227 PF13353 4Fe-4S single cluster domain J164_01228 PF01967 MoaC family J164_01229 PF02597 ThiS family J164_01230 PF02391 MoaE protein J164_01232 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01233 PF01527 Transposase J164_01234 PF00665 Integrase core domain J164_01234 PF13276 J164_01234 J164_01235 PF03389 MobA/MobL family J164_01238 PF00589 Phage integrase family J164_01240 PF12169 DNA polymerase III subunits gamma and tau domain III J164_01240 PF12170 DNA polymerase III tau subunit V interacting with alpha J164_01240 PF13177 DNA polymerase III, delta subunit J164_01241 PF02575 YbaB/EbfC DNA-binding family J164_01242 PF02132 RecR protein J164_01242 PF13662 Toprim domain J164_01243 PF01230 HIT domain J164_01244 PF03843 J164_01244 J164_01245 PF01841 Transglutaminase-like superfamily J164_01245 PF11992 J164_01245 J164_01246 PF01882 J164_01246 J164_01247 PF07726 ATPase family associated with various cellular activities (AAA) J164_01248 PF13231 J164_01248 J164_01251 PF02545 Maf-like protein J164_01252 PF02620 J164_01252 J164_01253 PF01783 Ribosomal L32p protein family J164_01254 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J164_01254 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J164_01255 PF08670 J164_01255 J164_01256 PF00698 Acyl transferase domain J164_01257 PF13561 Enoyl-(Acyl carrier protein) reductase J164_01258 PF00550 Phosphopantetheine attachment site J164_01259 PF00109 Beta-ketoacyl synthase, N-terminal domain J164_01259 PF02801 Beta-ketoacyl synthase, C-terminal domain J164_01260 PF00425 chorismate binding enzyme J164_01261 PF02618 YceG-like family J164_01262 PF13177 DNA polymerase III, delta subunit J164_01263 PF07238 PilZ domain J164_01266 PF00158 Sigma-54 interaction domain J164_01266 PF02954 Bacterial regulatory protein, Fis family J164_01266 PF06506 Propionate catabolism activator J164_01267 PF13714 Phosphoenolpyruvate phosphomutase J164_01268 PF00285 Citrate synthase J164_01269 PF00330 Aconitase family (aconitate hydratase) J164_01269 PF00694 Aconitase C-terminal domain J164_01270 PF03693 Uncharacterised protein family (UPF0156) J164_01271 PF05016 Plasmid stabilisation system protein J164_01272 PF04303 PrpF protein J164_01273 PF00593 TonB dependent receptor J164_01273 PF07715 TonB-dependent Receptor Plug Domain J164_01274 PF01156 Inosine-uridine preferring nucleoside hydrolase J164_01275 PF00207 Alpha-2-macroglobulin family J164_01275 PF01835 MG2 domain J164_01275 PF07703 Alpha-2-macroglobulin family N-terminal region J164_01275 PF11974 Alpha-2-macroglobulin MG1 domain J164_01276 PF00593 TonB dependent receptor J164_01276 PF07715 TonB-dependent Receptor Plug Domain J164_01277 PF03009 Glycerophosphoryl diester phosphodiesterase family J164_01277 PF16387 J164_01277 J164_01278 PF00905 Penicillin binding protein transpeptidase domain J164_01278 PF00912 Transglycosylase J164_01278 PF06832 J164_01278 J164_01279 PF00210 Ferritin-like domain J164_01280 PF08534 Redoxin J164_01281 PF00011 Hsp20/alpha crystallin family J164_01282 PF00226 DnaJ domain J164_01282 PF01556 DnaJ C terminal domain J164_01284 PF00072 Response regulator receiver domain J164_01286 PF01145 SPFH domain / Band 7 family J164_01287 PF01145 SPFH domain / Band 7 family J164_01288 PF01797 Transposase IS200 like J164_01289 PF00709 Adenylosuccinate synthetase J164_01290 PF01433 Peptidase family M1 J164_01290 PF11838 ERAP1-like C-terminal domain J164_01292 PF13561 Enoyl-(Acyl carrier protein) reductase J164_01293 PF00440 Bacterial regulatory proteins, tetR family J164_01302 PF00069 Protein kinase domain J164_01304 PF00440 Bacterial regulatory proteins, tetR family J164_01306 PF00300 Histidine phosphatase superfamily (branch 1) J164_01307 PF01256 Carbohydrate kinase J164_01308 PF02055 O-Glycosyl hydrolase family 30 J164_01308 PF17189 J164_01308 J164_01309 PF00723 Glycosyl hydrolases family 15 J164_01310 PF13561 Enoyl-(Acyl carrier protein) reductase J164_01311 PF07971 Glycosyl hydrolase family 92 J164_01313 PF00106 short chain dehydrogenase J164_01314 PF13532 2OG-Fe(II) oxygenase superfamily J164_01315 PF00027 Cyclic nucleotide-binding domain J164_01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_01316 PF02148 Zn-finger in ubiquitin-hydrolases and other protein J164_01317 PF00563 EAL domain J164_01318 PF13328 HD domain J164_01319 PF00005 ABC transporter J164_01320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J164_01320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J164_01321 PF00941 FAD binding domain in molybdopterin dehydrogenase J164_01321 PF03450 CO dehydrogenase flavoprotein C-terminal domain J164_01322 PF00111 2Fe-2S iron-sulfur cluster binding domain J164_01322 PF01799 [2Fe-2S] binding domain J164_01323 PF05559 J164_01323 J164_01325 PF07883 Cupin domain J164_01327 PF02661 Fic/DOC family J164_01328 PF04014 Antidote-toxin recognition MazE J164_01329 PF00717 Peptidase S24-like J164_01329 PF01726 LexA DNA binding domain J164_01331 PF00817 impB/mucB/samB family J164_01332 PF02811 PHP domain J164_01332 PF07733 Bacterial DNA polymerase III alpha subunit J164_01332 PF14579 Helix-hairpin-helix motif J164_01333 PF00326 Prolyl oligopeptidase family J164_01334 PF08668 HDOD domain J164_01335 PF03169 J164_01335 J164_01336 PF13557 J164_01336 J164_01338 PF00326 Prolyl oligopeptidase family J164_01338 PF07676 WD40-like Beta Propeller Repeat J164_01341 PF08448 PAS fold J164_01341 PF12833 Helix-turn-helix domain J164_01346 PF00199 Catalase J164_01346 PF06628 Catalase-related immune-responsive J164_01347 PF00248 Aldo/keto reductase family J164_01348 PF00135 Carboxylesterase family J164_01349 PF02347 Glycine cleavage system P-protein J164_01352 PF07690 Major Facilitator Superfamily J164_01354 PF01401 Angiotensin-converting enzyme J164_01355 PF00884 Sulfatase J164_01355 PF08019 J164_01355 J164_01356 PF01569 PAP2 superfamily J164_01357 PF13231 J164_01357 J164_01358 PF00072 Response regulator receiver domain J164_01358 PF00486 Transcriptional regulatory protein, C terminal J164_01359 PF00512 His Kinase A (phospho-acceptor) domain J164_01359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01361 PF03776 Septum formation topological specificity factor MinE J164_01362 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_01363 PF03775 Septum formation inhibitor MinC, C-terminal domain J164_01363 PF05209 Septum formation inhibitor MinC, N-terminal domain J164_01364 PF00583 Acetyltransferase (GNAT) family J164_01365 PF07730 Histidine kinase J164_01366 PF00072 Response regulator receiver domain J164_01366 PF00196 Bacterial regulatory proteins, luxR family J164_01367 PF10604 Polyketide cyclase / dehydrase and lipid transport J164_01368 PF04241 J164_01368 J164_01369 PF00730 HhH-GPD superfamily base excision DNA repair protein J164_01370 PF02557 D-alanyl-D-alanine carboxypeptidase J164_01373 PF01145 SPFH domain / Band 7 family J164_01374 PF02222 ATP-grasp domain J164_01375 PF03372 Endonuclease/Exonuclease/phosphatase family J164_01376 PF04376 J164_01376 J164_01376 PF04377 J164_01376 J164_01377 PF13202 EF hand J164_01377 PF13499 EF-hand domain pair J164_01380 PF09413 Domain of unknown function (DUF2007) J164_01381 PF13622 Thioesterase-like superfamily J164_01382 PF00378 Enoyl-CoA hydratase/isomerase family J164_01383 PF04314 Protein of unknown function (DUF461) J164_01384 PF13279 Thioesterase-like superfamily J164_01385 PF00005 ABC transporter J164_01386 PF00829 Ribosomal prokaryotic L21 protein J164_01387 PF01016 Ribosomal L27 protein J164_01388 PF01018 GTP1/OBG J164_01388 PF01926 50S ribosome-binding GTPase J164_01389 PF01649 Ribosomal protein S20 J164_01390 PF03023 J164_01390 J164_01391 PF01687 Riboflavin kinase J164_01391 PF06574 FAD synthetase J164_01392 PF00133 tRNA synthetases class I (I, L, M and V) J164_01392 PF06827 Zinc finger found in FPG and IleRS J164_01392 PF08264 Anticodon-binding domain of tRNA J164_01393 PF01252 J164_01393 J164_01394 PF02401 LytB protein J164_01396 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J164_01396 PF06481 COX Aromatic Rich Motif J164_01397 PF00115 Cytochrome C and Quinol oxidase polypeptide I J164_01398 PF00510 Cytochrome c oxidase subunit III J164_01399 PF03626 J164_01399 J164_01400 PF05299 M61 glycyl aminopeptidase J164_01400 PF07720 Tetratricopeptide repeat J164_01401 PF13481 AAA domain J164_01401 PF13541 Subunit ChlI of Mg-chelatase J164_01402 PF05656 J164_01402 J164_01403 PF00486 Transcriptional regulatory protein, C terminal J164_01404 PF12833 Helix-turn-helix domain J164_01405 PF00183 Hsp90 protein J164_01405 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01407 PF01740 STAS domain J164_01407 PF14361 J164_01407 J164_01409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01410 PF07228 Stage II sporulation protein E (SpoIIE) J164_01410 PF13581 Histidine kinase-like ATPase domain J164_01411 PF00512 His Kinase A (phospho-acceptor) domain J164_01411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01412 PF00072 Response regulator receiver domain J164_01412 PF00512 His Kinase A (phospho-acceptor) domain J164_01412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01412 PF08448 PAS fold J164_01413 PF04616 Glycosyl hydrolases family 43 J164_01414 PF00593 TonB dependent receptor J164_01414 PF07715 TonB-dependent Receptor Plug Domain J164_01415 PF00085 Thioredoxin J164_01416 PF07237 Protein of unknown function (DUF1428) J164_01417 PF00072 Response regulator receiver domain J164_01417 PF00512 His Kinase A (phospho-acceptor) domain J164_01417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01418 PF01339 CheB methylesterase J164_01419 PF01739 CheR methyltransferase, SAM binding domain J164_01419 PF03705 CheR methyltransferase, all-alpha domain J164_01420 PF00072 Response regulator receiver domain J164_01420 PF00512 His Kinase A (phospho-acceptor) domain J164_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01420 PF13185 GAF domain J164_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01421 PF13426 PAS domain J164_01422 PF00072 Response regulator receiver domain J164_01423 PF00722 Glycosyl hydrolases family 16 J164_01424 PF06964 Alpha-L-arabinofuranosidase C-terminus J164_01425 PF01263 Aldose 1-epimerase J164_01426 PF01578 J164_01426 J164_01427 PF00448 SRP54-type protein, GTPase domain J164_01427 PF02881 SRP54-type protein, helical bundle domain J164_01427 PF02978 Signal peptide binding domain J164_01428 PF03060 Nitronate monooxygenase J164_01429 PF01063 Aminotransferase class IV J164_01430 PF00886 Ribosomal protein S16 J164_01431 PF01782 RimM N-terminal domain J164_01431 PF05239 PRC-barrel domain J164_01432 PF01746 tRNA (Guanine-1)-methyltransferase J164_01433 PF01245 Ribosomal protein L19 J164_01434 PF01554 MatE J164_01435 PF01554 MatE J164_01436 PF08279 HTH domain J164_01436 PF13280 J164_01436 J164_01437 PF00043 Glutathione S-transferase, C-terminal domain J164_01437 PF13417 Glutathione S-transferase, N-terminal domain J164_01438 PF01479 S4 domain J164_01439 PF00141 Peroxidase J164_01440 PF06078 Bacterial protein of unknown function (DUF937) J164_01441 PF00488 MutS domain V J164_01441 PF01624 MutS domain I J164_01441 PF05188 MutS domain II J164_01441 PF05190 MutS family domain IV J164_01441 PF05192 MutS domain III J164_01443 PF05593 J164_01443 J164_01445 PF14085 J164_01445 J164_01446 PF00754 F5/8 type C domain J164_01446 PF01120 Alpha-L-fucosidase J164_01448 PF00703 Glycosyl hydrolases family 2 J164_01448 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J164_01448 PF02837 Glycosyl hydrolases family 2, sugar binding domain J164_01448 PF16355 J164_01448 J164_01449 PF07745 Glycosyl hydrolase family 53 J164_01450 PF00593 TonB dependent receptor J164_01450 PF07715 TonB-dependent Receptor Plug Domain J164_01451 PF06114 Domain of unknown function (DUF955) J164_01451 PF09856 J164_01451 J164_01451 PF13560 Helix-turn-helix domain J164_01452 PF00171 Aldehyde dehydrogenase family J164_01453 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_01453 PF02770 Acyl-CoA dehydrogenase, middle domain J164_01453 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_01454 PF00378 Enoyl-CoA hydratase/isomerase family J164_01455 PF16113 J164_01455 J164_01456 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J164_01456 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J164_01457 PF01545 Cation efflux family J164_01458 PF00378 Enoyl-CoA hydratase/isomerase family J164_01458 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J164_01458 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J164_01459 PF04542 Sigma-70 region 2 J164_01459 PF08281 Sigma-70, region 4 J164_01460 PF03872 Anti sigma-E protein RseA, N-terminal domain J164_01461 PF13180 PDZ domain J164_01461 PF13365 Trypsin-like peptidase domain J164_01462 PF00009 Elongation factor Tu GTP binding domain J164_01462 PF00679 Elongation factor G C-terminus J164_01462 PF03144 Elongation factor Tu domain 2 J164_01462 PF06421 GTP-binding protein LepA C-terminus J164_01463 PF00717 Peptidase S24-like J164_01464 PF16137 J164_01464 J164_01465 PF00035 Double-stranded RNA binding motif J164_01465 PF14622 Ribonuclease-III-like J164_01466 PF01926 50S ribosome-binding GTPase J164_01466 PF07650 KH domain J164_01467 PF02565 Recombination protein O C terminal J164_01467 PF11967 Recombination protein O N terminal J164_01468 PF00072 Response regulator receiver domain J164_01468 PF01627 Hpt domain J164_01469 PF05958 tRNA (Uracil-5-)-methyltransferase J164_01470 PF01928 CYTH domain J164_01471 PF01323 DSBA-like thioredoxin domain J164_01472 PF13450 NAD(P)-binding Rossmann-like domain J164_01473 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J164_01474 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_01475 PF00156 Phosphoribosyl transferase domain J164_01476 PF01048 Phosphorylase superfamily J164_01477 PF00313 'Cold-shock' DNA-binding domain J164_01478 PF01494 FAD binding domain J164_01479 PF00149 Calcineurin-like phosphoesterase J164_01480 PF00270 DEAD/DEAH box helicase J164_01480 PF00271 Helicase conserved C-terminal domain J164_01480 PF08494 J164_01480 J164_01481 PF01068 ATP dependent DNA ligase domain J164_01481 PF04675 DNA ligase N terminus J164_01481 PF04679 ATP dependent DNA ligase C terminal region J164_01485 PF04519 J164_01485 J164_01486 PF00990 GGDEF domain J164_01486 PF05227 CHASE3 domain J164_01486 PF13185 GAF domain J164_01489 PF00108 Thiolase, N-terminal domain J164_01489 PF02803 Thiolase, C-terminal domain J164_01490 PF00082 Subtilase family J164_01490 PF03797 Autotransporter beta-domain J164_01490 PF12951 J164_01490 J164_01491 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J164_01491 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J164_01492 PF13640 2OG-Fe(II) oxygenase superfamily J164_01493 PF01863 Protein of unknown function DUF45 J164_01494 PF07043 J164_01494 J164_01495 PF10982 Protein of unknown function (DUF2789) J164_01496 PF01258 Prokaryotic dksA/traR C4-type zinc finger J164_01497 PF00924 Mechanosensitive ion channel J164_01499 PF06723 MreB/Mbl protein J164_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J164_01501 PF01545 Cation efflux family J164_01502 PF03831 PhnA protein J164_01502 PF08274 PhnA Zinc-Ribbon J164_01503 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J164_01504 PF07690 Major Facilitator Superfamily J164_01506 PF09537 Domain of unknown function (DUF2383) J164_01507 PF13563 2'-5' RNA ligase superfamily J164_01509 PF09791 J164_01509 J164_01510 PF06057 Bacterial virulence protein (VirJ) J164_01511 PF03706 J164_01511 J164_01511 PF09924 Uncharacterized conserved protein (DUF2156) J164_01513 PF06197 J164_01513 J164_01514 PF01042 Endoribonuclease L-PSP J164_01515 PF02353 Mycolic acid cyclopropane synthetase J164_01516 PF06966 J164_01516 J164_01517 PF11086 J164_01517 J164_01518 PF02353 Mycolic acid cyclopropane synthetase J164_01519 PF07103 J164_01519 J164_01520 PF01593 Flavin containing amine oxidoreductase J164_01521 PF00487 J164_01521 J164_01522 PF10099 J164_01522 J164_01523 PF04542 Sigma-70 region 2 J164_01523 PF08281 Sigma-70, region 4 J164_01526 PF04060 Putative Fe-S cluster J164_01526 PF14697 4Fe-4S dicluster domain J164_01527 PF12710 haloacid dehalogenase-like hydrolase J164_01528 PF01588 Putative tRNA binding domain J164_01528 PF09334 tRNA synthetases class I (M) J164_01529 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J164_01530 PF01433 Peptidase family M1 J164_01530 PF12679 J164_01530 J164_01531 PF00005 ABC transporter J164_01532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_01533 PF00324 Amino acid permease J164_01534 PF02574 Homocysteine S-methyltransferase J164_01535 PF05960 Bacterial protein of unknown function (DUF885) J164_01536 PF02592 J164_01536 J164_01537 PF04367 J164_01537 J164_01539 PF13372 Alginate export J164_01540 PF03551 Transcriptional regulator PadR-like family J164_01541 PF13796 J164_01541 J164_01542 PF06850 J164_01542 J164_01543 PF13489 Methyltransferase domain J164_01544 PF03653 J164_01544 J164_01546 PF14559 Tetratricopeptide repeat J164_01547 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J164_01548 PF01336 OB-fold nucleic acid binding domain J164_01548 PF02811 PHP domain J164_01548 PF07733 Bacterial DNA polymerase III alpha subunit J164_01548 PF14579 Helix-hairpin-helix motif J164_01549 PF01351 Ribonuclease HII J164_01550 PF02684 J164_01550 J164_01551 PF00132 Bacterial transferase hexapeptide (six repeats) J164_01551 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J164_01552 PF07977 FabA-like domain J164_01553 PF00132 Bacterial transferase hexapeptide (six repeats) J164_01553 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J164_01555 PF01103 Surface antigen J164_01555 PF07244 Surface antigen variable number repeat J164_01556 PF02163 Peptidase family M50 J164_01557 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J164_01557 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal J164_01557 PF13288 DXP reductoisomerase C-terminal domain J164_01558 PF01148 Cytidylyltransferase family J164_01559 PF01255 Putative undecaprenyl diphosphate synthase J164_01560 PF01765 Ribosome recycling factor J164_01561 PF00696 Amino acid kinase family J164_01562 PF00990 GGDEF domain J164_01562 PF08668 HDOD domain J164_01563 PF00889 Elongation factor TS J164_01564 PF00318 Ribosomal protein S2 J164_01565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J164_01567 PF05229 J164_01567 J164_01568 PF00577 Outer membrane usher protein J164_01568 PF13953 PapC C-terminal domain J164_01569 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J164_01570 PF05229 J164_01570 J164_01571 PF00557 Metallopeptidase family M24 J164_01572 PF01909 Nucleotidyltransferase domain J164_01572 PF01966 HD domain J164_01572 PF08335 GlnD PII-uridylyltransferase J164_01573 PF00132 Bacterial transferase hexapeptide (six repeats) J164_01573 PF14602 Hexapeptide repeat of succinyl-transferase J164_01573 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J164_01574 PF03960 ArsC family J164_01575 PF01546 Peptidase family M20/M25/M40 J164_01575 PF07687 Peptidase dimerisation domain J164_01576 PF00733 Asparagine synthase J164_01576 PF13537 Glutamine amidotransferase domain J164_01577 PF13229 Right handed beta helix region J164_01578 PF00593 TonB dependent receptor J164_01578 PF07715 TonB-dependent Receptor Plug Domain J164_01579 PF01804 Penicillin amidase J164_01580 PF01804 Penicillin amidase J164_01581 PF00210 Ferritin-like domain J164_01582 PF05724 Thiopurine S-methyltransferase (TPMT) J164_01584 PF00521 DNA gyrase/topoisomerase IV, subunit A J164_01584 PF03989 DNA gyrase C-terminal domain, beta-propeller J164_01585 PF02311 AraC-like ligand binding domain J164_01585 PF12833 Helix-turn-helix domain J164_01586 PF01047 MarR family J164_01587 PF02321 Outer membrane efflux protein J164_01588 PF00529 HlyD family secretion protein J164_01588 PF16576 J164_01588 J164_01589 PF07690 Major Facilitator Superfamily J164_01591 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_01591 PF01915 Glycosyl hydrolase family 3 C-terminal domain J164_01591 PF14310 Fibronectin type III-like domain J164_01592 PF00246 Zinc carboxypeptidase J164_01593 PF00854 POT family J164_01594 PF01694 Rhomboid family J164_01596 PF14542 GCN5-related N-acetyl-transferase J164_01598 PF01047 MarR family J164_01599 PF01432 Peptidase family M3 J164_01600 PF00255 Glutathione peroxidase J164_01601 PF00175 Oxidoreductase NAD-binding domain J164_01601 PF00970 Oxidoreductase FAD-binding domain J164_01602 PF00005 ABC transporter J164_01603 PF05681 J164_01603 J164_01603 PF05683 Fumarase C-terminus J164_01604 PF02798 Glutathione S-transferase, N-terminal domain J164_01604 PF14497 Glutathione S-transferase, C-terminal domain J164_01605 PF00484 Carbonic anhydrase J164_01606 PF02253 Phospholipase A1 J164_01607 PF04306 J164_01607 J164_01608 PF00313 'Cold-shock' DNA-binding domain J164_01609 PF05433 J164_01609 J164_01610 PF01322 Cytochrome C' J164_01611 PF00899 ThiF family J164_01612 PF01026 TatD related DNase J164_01614 PF05433 J164_01614 J164_01615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_01615 PF02770 Acyl-CoA dehydrogenase, middle domain J164_01615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_01616 PF01841 Transglutaminase-like superfamily J164_01616 PF12969 Domain of Unknown Function with PDB structure (DUF3857) J164_01617 PF00043 Glutathione S-transferase, C-terminal domain J164_01617 PF02798 Glutathione S-transferase, N-terminal domain J164_01618 PF00733 Asparagine synthase J164_01618 PF13537 Glutamine amidotransferase domain J164_01619 PF03358 NADPH-dependent FMN reductase J164_01620 PF00772 DnaB-like helicase N terminal domain J164_01620 PF03796 DnaB-like helicase C terminal domain J164_01621 PF00875 DNA photolyase J164_01621 PF03441 FAD binding domain of DNA photolyase J164_01622 PF00691 OmpA family J164_01622 PF13488 J164_01622 J164_01624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01624 PF03466 LysR substrate binding domain J164_01626 PF00106 short chain dehydrogenase J164_01627 PF16576 J164_01627 J164_01628 PF00873 AcrB/AcrD/AcrF family J164_01629 PF00106 short chain dehydrogenase J164_01630 PF02321 Outer membrane efflux protein J164_01631 PF00990 GGDEF domain J164_01633 PF00990 GGDEF domain J164_01633 PF05227 CHASE3 domain J164_01633 PF13185 GAF domain J164_01639 PF06114 Domain of unknown function (DUF955) J164_01643 PF00589 Phage integrase family J164_01646 PF01381 Helix-turn-helix J164_01647 PF02661 Fic/DOC family J164_01650 PF01527 Transposase J164_01651 PF00665 Integrase core domain J164_01653 PF03389 MobA/MobL family J164_01656 PF13910 J164_01656 J164_01657 PF00589 Phage integrase family J164_01659 PF00082 Subtilase family J164_01660 PF01668 SmpB protein J164_01661 PF03364 Polyketide cyclase / dehydrase and lipid transport J164_01662 PF03658 RnfH family Ubiquitin J164_01663 PF04355 SmpA / OmlA family J164_01664 PF01475 Ferric uptake regulator family J164_01665 PF02463 RecF/RecN/SMC N terminal domain J164_01666 PF01628 HrcA protein C terminal domain J164_01666 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J164_01667 PF01025 GrpE J164_01668 PF00012 Hsp70 protein J164_01669 PF00226 DnaJ domain J164_01669 PF00684 DnaJ central domain J164_01669 PF01556 DnaJ C terminal domain J164_01671 PF08543 Phosphomethylpyrimidine kinase J164_01672 PF01842 ACT domain J164_01672 PF02153 Prephenate dehydrogenase J164_01674 PF02321 Outer membrane efflux protein J164_01675 PF16576 J164_01675 J164_01677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01677 PF03466 LysR substrate binding domain J164_01678 PF00005 ABC transporter J164_01678 PF00664 ABC transporter transmembrane region J164_01679 PF01205 Uncharacterized protein family UPF0029 J164_01679 PF09186 Domain of unknown function (DUF1949) J164_01680 PF03641 Possible lysine decarboxylase J164_01681 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J164_01681 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_01682 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J164_01682 PF00364 Biotin-requiring enzyme J164_01682 PF02817 e3 binding domain J164_01683 PF00676 Dehydrogenase E1 component J164_01683 PF02779 Transketolase, pyrimidine binding domain J164_01683 PF16078 J164_01683 J164_01683 PF16870 J164_01683 J164_01684 PF13673 Acetyltransferase (GNAT) domain J164_01685 PF08007 Cupin superfamily protein J164_01686 PF11259 J164_01686 J164_01687 PF00206 Lyase J164_01687 PF08328 Adenylosuccinate lyase C-terminal J164_01688 PF00188 Cysteine-rich secretory protein family J164_01689 PF00571 CBS domain J164_01689 PF01595 J164_01689 J164_01689 PF03471 Transporter associated domain J164_01690 PF00206 Lyase J164_01690 PF10415 Fumarase C C-terminus J164_01692 PF11101 J164_01692 J164_01695 PF00005 ABC transporter J164_01696 PF00392 Bacterial regulatory proteins, gntR family J164_01698 PF00255 Glutathione peroxidase J164_01699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J164_01699 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J164_01700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J164_01700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J164_01700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J164_01701 PF04102 SlyX J164_01702 PF09831 J164_01702 J164_01703 PF13557 J164_01703 J164_01704 PF00356 Bacterial regulatory proteins, lacI family J164_01704 PF13377 Periplasmic binding protein-like domain J164_01705 PF07690 Major Facilitator Superfamily J164_01706 PF00294 pfkB family carbohydrate kinase J164_01707 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) J164_01708 PF00809 Pterin binding enzyme J164_01708 PF02310 B12 binding domain J164_01708 PF02607 B12 binding domain J164_01708 PF02965 Vitamin B12 dependent methionine synthase, activation domain J164_01709 PF02574 Homocysteine S-methyltransferase J164_01710 PF01022 Bacterial regulatory protein, arsR family J164_01710 PF08241 Methyltransferase domain J164_01711 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_01711 PF02770 Acyl-CoA dehydrogenase, middle domain J164_01711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_01712 PF13472 GDSL-like Lipase/Acylhydrolase family J164_01714 PF00575 S1 RNA binding domain J164_01714 PF00773 RNB domain J164_01714 PF08206 Ribonuclease B OB domain J164_01715 PF04828 Glutathione-dependent formaldehyde-activating enzyme J164_01716 PF00588 SpoU rRNA Methylase family J164_01716 PF08032 RNA 2'-O ribose methyltransferase substrate binding J164_01717 PF00990 GGDEF domain J164_01717 PF07494 Two component regulator propeller J164_01717 PF07495 Y_Y_Y domain J164_01718 PF00929 Exonuclease J164_01719 PF11776 Domain of unknown function (DUF3315) J164_01720 PF01895 PhoU domain J164_01721 PF00005 ABC transporter J164_01722 PF00528 Binding-protein-dependent transport system inner membrane component J164_01723 PF00528 Binding-protein-dependent transport system inner membrane component J164_01724 PF12849 PBP superfamily domain J164_01725 PF12849 PBP superfamily domain J164_01726 PF07396 Phosphate-selective porin O and P J164_01728 PF00484 Carbonic anhydrase J164_01729 PF00916 J164_01729 J164_01730 PF00633 Helix-hairpin-helix motif J164_01730 PF00730 HhH-GPD superfamily base excision DNA repair protein J164_01732 PF00378 Enoyl-CoA hydratase/isomerase family J164_01733 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J164_01733 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J164_01734 PF00293 NUDIX domain J164_01734 PF06945 J164_01734 J164_01735 PF00581 Rhodanese-like domain J164_01736 PF07920 Protein of unknown function (DUF1684) J164_01737 PF01510 N-acetylmuramoyl-L-alanine amidase J164_01738 PF03473 MOSC domain J164_01739 PF05728 Uncharacterised protein family (UPF0227) J164_01740 PF00583 Acetyltransferase (GNAT) family J164_01741 PF00005 ABC transporter J164_01742 PF01170 Putative RNA methylase family UPF0020 J164_01742 PF02926 THUMP domain J164_01742 PF10672 S-adenosylmethionine-dependent methyltransferase J164_01743 PF01513 ATP-NAD kinase J164_01744 PF06189 J164_01744 J164_01745 PF11159 J164_01745 J164_01746 PF09365 J164_01746 J164_01747 PF00929 Exonuclease J164_01747 PF08411 Exonuclease C-terminal J164_01748 PF01494 FAD binding domain J164_01749 PF00266 Aminotransferase class-V J164_01750 PF12805 J164_01750 J164_01750 PF13515 J164_01750 J164_01751 PF06052 3-hydroxyanthranilic acid dioxygenase J164_01752 PF00484 Carbonic anhydrase J164_01753 PF05838 Glycosyl hydrolase 108 J164_01753 PF09374 Predicted Peptidoglycan domain J164_01754 PF11655 J164_01754 J164_01755 PF11655 J164_01755 J164_01761 PF00072 Response regulator receiver domain J164_01761 PF00196 Bacterial regulatory proteins, luxR family J164_01762 PF00161 Ribosome inactivating protein J164_01764 PF04299 Putative FMN-binding domain J164_01768 PF00152 tRNA synthetases class II (D, K and N) J164_01768 PF01336 OB-fold nucleic acid binding domain J164_01769 PF01521 Iron-sulphur cluster biosynthesis J164_01770 PF01250 Ribosomal protein S6 J164_01771 PF01084 Ribosomal protein S18 J164_01772 PF01281 Ribosomal protein L9, N-terminal domain J164_01772 PF03948 Ribosomal protein L9, C-terminal domain J164_01773 PF02463 RecF/RecN/SMC N terminal domain J164_01774 PF04354 ZipA, C-terminal FtsZ-binding domain J164_01776 PF00155 Aminotransferase class I and II J164_01777 PF00533 BRCA1 C Terminus (BRCT) domain J164_01777 PF01653 NAD-dependent DNA ligase adenylation domain J164_01777 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J164_01777 PF03120 NAD-dependent DNA ligase OB-fold domain J164_01777 PF12826 Helix-hairpin-helix motif J164_01778 PF00152 tRNA synthetases class II (D, K and N) J164_01779 PF11218 J164_01779 J164_01780 PF01008 Initiation factor 2 subunit family J164_01781 PF00521 DNA gyrase/topoisomerase IV, subunit A J164_01781 PF03989 DNA gyrase C-terminal domain, beta-propeller J164_01782 PF01011 PQQ enzyme repeat J164_01782 PF13360 PQQ-like domain J164_01784 PF01175 Urocanase J164_01784 PF17391 J164_01784 J164_01784 PF17392 J164_01784 J164_01785 PF05013 N-formylglutamate amidohydrolase J164_01786 PF00221 Aromatic amino acid lyase J164_01787 PF07969 Amidohydrolase family J164_01788 PF01979 Amidohydrolase family J164_01789 PF00392 Bacterial regulatory proteins, gntR family J164_01789 PF07702 UTRA domain J164_01790 PF04471 Restriction endonuclease J164_01792 PF05597 J164_01792 J164_01793 PF09650 J164_01793 J164_01794 PF16697 J164_01794 J164_01795 PF01794 J164_01795 J164_01796 PF00174 Oxidoreductase molybdopterin binding domain J164_01797 PF00266 Aminotransferase class-V J164_01798 PF00800 Prephenate dehydratase J164_01798 PF01817 Chorismate mutase type II J164_01798 PF01842 ACT domain J164_01799 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J164_01800 PF03544 Gram-negative bacterial TonB protein C-terminal J164_01801 PF03544 Gram-negative bacterial TonB protein C-terminal J164_01802 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J164_01802 PF02403 Seryl-tRNA synthetase N-terminal domain J164_01803 PF02525 Flavodoxin-like fold J164_01804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01804 PF03466 LysR substrate binding domain J164_01806 PF04343 J164_01806 J164_01807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_01807 PF12729 J164_01807 J164_01808 PF01494 FAD binding domain J164_01809 PF01047 MarR family J164_01810 PF00072 Response regulator receiver domain J164_01810 PF00512 His Kinase A (phospho-acceptor) domain J164_01810 PF00989 PAS fold J164_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01810 PF08447 PAS fold J164_01810 PF08448 PAS fold J164_01811 PF00072 Response regulator receiver domain J164_01812 PF06745 KaiC J164_01813 PF00072 Response regulator receiver domain J164_01813 PF00512 His Kinase A (phospho-acceptor) domain J164_01813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01813 PF08448 PAS fold J164_01815 PF03918 Cytochrome C biogenesis protein J164_01816 PF00578 AhpC/TSA family J164_01817 PF01578 J164_01817 J164_01817 PF16327 J164_01817 J164_01818 PF03100 CcmE J164_01819 PF04995 J164_01819 J164_01820 PF01578 J164_01820 J164_01821 PF00082 Subtilase family J164_01822 PF13490 Putative zinc-finger J164_01823 PF04542 Sigma-70 region 2 J164_01823 PF08281 Sigma-70, region 4 J164_01826 PF00034 Cytochrome c J164_01828 PF01292 Prokaryotic cytochrome b561 J164_01829 PF05523 WxcM-like, C-terminal J164_01830 PF00132 Bacterial transferase hexapeptide (six repeats) J164_01832 PF13480 Acetyltransferase (GNAT) domain J164_01833 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J164_01834 PF13440 J164_01834 J164_01835 PF00535 Glycosyl transferase family 2 J164_01837 PF02706 Chain length determinant protein J164_01838 PF13649 Methyltransferase domain J164_01839 PF01979 Amidohydrolase family J164_01840 PF08241 Methyltransferase domain J164_01841 PF00534 Glycosyl transferases group 1 J164_01841 PF13439 Glycosyltransferase Family 4 J164_01842 PF00534 Glycosyl transferases group 1 J164_01842 PF13579 Glycosyl transferase 4-like domain J164_01843 PF14907 Uncharacterised nucleotidyltransferase J164_01844 PF04055 Radical SAM superfamily J164_01846 PF00005 ABC transporter J164_01847 PF00083 Sugar (and other) transporter J164_01848 PF00296 Luciferase-like monooxygenase J164_01849 PF16242 J164_01849 J164_01850 PF06055 J164_01850 J164_01851 PF00571 CBS domain J164_01851 PF01595 J164_01851 J164_01851 PF03471 Transporter associated domain J164_01852 PF01865 Protein of unknown function DUF47 J164_01853 PF01384 J164_01853 J164_01854 PF02698 DUF218 domain J164_01855 PF00450 Serine carboxypeptidase J164_01856 PF00204 DNA gyrase B J164_01856 PF00986 DNA gyrase B subunit, carboxyl terminus J164_01856 PF01751 Toprim domain J164_01856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01858 PF00117 Glutamine amidotransferase class-I J164_01858 PF06418 CTP synthase N-terminus J164_01859 PF00793 DAHP synthetase I family J164_01861 PF00113 Enolase, C-terminal TIM barrel domain J164_01861 PF03952 Enolase, N-terminal domain J164_01862 PF04977 Septum formation initiator J164_01863 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J164_01864 PF02542 YgbB family J164_01865 PF01142 tRNA pseudouridine synthase D (TruD) J164_01866 PF01713 Smr domain J164_01867 PF01975 Survival protein SurE J164_01868 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J164_01869 PF09335 J164_01869 J164_01870 PF01476 LysM domain J164_01870 PF01551 Peptidase family M23 J164_01872 PF04430 Protein of unknown function (DUF498/DUF598) J164_01873 PF01985 CRS1 / YhbY (CRM) domain J164_01874 PF01728 FtsJ-like methyltransferase J164_01875 PF00004 ATPase family associated with various cellular activities (AAA) J164_01875 PF01434 Peptidase family M41 J164_01875 PF06480 FtsH Extracellular J164_01876 PF00809 Pterin binding enzyme J164_01877 PF01715 IPP transferase J164_01878 PF17209 J164_01878 J164_01879 PF01926 50S ribosome-binding GTPase J164_01879 PF13167 J164_01879 J164_01879 PF16360 J164_01879 J164_01880 PF02464 Competence-damaged protein J164_01881 PF03109 J164_01881 J164_01882 PF00717 Peptidase S24-like J164_01882 PF01726 LexA DNA binding domain J164_01883 PF00154 recA bacterial DNA recombination protein J164_01884 PF02631 RecX family J164_01885 PF01411 tRNA synthetases class II (A) J164_01885 PF02272 DHHA1 domain J164_01885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J164_01886 PF02599 Global regulator protein family J164_01888 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_01888 PF08447 PAS fold J164_01889 PF02678 Pirin J164_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01890 PF03466 LysR substrate binding domain J164_01891 PF00581 Rhodanese-like domain J164_01891 PF09335 J164_01891 J164_01894 PF12146 Putative lysophospholipase J164_01895 PF08543 Phosphomethylpyrimidine kinase J164_01896 PF06912 J164_01896 J164_01898 PF02562 PhoH-like protein J164_01898 PF13638 PIN domain J164_01899 PF00578 AhpC/TSA family J164_01900 PF06877 Regulator of ribonuclease activity B J164_01901 PF13740 ACT domain J164_01902 PF00701 Dihydrodipicolinate synthetase family J164_01904 PF00037 4Fe-4S binding domain J164_01904 PF11953 Domain of unknown function (DUF3470) J164_01905 PF05035 2-keto-3-deoxy-galactonokinase J164_01906 PF08450 SMP-30/Gluconolaconase/LRE-like region J164_01907 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J164_01907 PF13378 Enolase C-terminal domain-like J164_01908 PF01081 KDPG and KHG aldolase J164_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_01910 PF03466 LysR substrate binding domain J164_01911 PF00593 TonB dependent receptor J164_01911 PF07715 TonB-dependent Receptor Plug Domain J164_01912 PF00593 TonB dependent receptor J164_01912 PF07715 TonB-dependent Receptor Plug Domain J164_01914 PF03629 Domain of unknown function (DUF303) J164_01914 PF13364 Beta-galactosidase jelly roll domain J164_01915 PF02449 Beta-galactosidase J164_01916 PF01055 Glycosyl hydrolases family 31 J164_01916 PF07691 PA14 domain J164_01916 PF16338 J164_01916 J164_01916 PF17137 J164_01916 J164_01917 PF14498 Glycosyl hydrolase family 65, N-terminal domain J164_01918 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J164_01918 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J164_01920 PF00083 Sugar (and other) transporter J164_01921 PF05231 J164_01921 J164_01923 PF01520 N-acetylmuramoyl-L-alanine amidase J164_01923 PF11741 AMIN domain J164_01924 PF02649 Type I GTP cyclohydrolase folE2 J164_01928 PF01743 Poly A polymerase head domain J164_01928 PF12626 Polymerase A arginine-rich C-terminus J164_01928 PF12627 Probable RNA and SrmB- binding site of polymerase A J164_01929 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J164_01930 PF02548 Ketopantoate hydroxymethyltransferase J164_01931 PF02569 Pantoate-beta-alanine ligase J164_01932 PF02261 Aspartate decarboxylase J164_01933 PF00342 Phosphoglucose isomerase J164_01934 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J164_01936 PF05787 Bacterial protein of unknown function (DUF839) J164_01937 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_01937 PF01915 Glycosyl hydrolase family 3 C-terminal domain J164_01938 PF00474 Sodium:solute symporter family J164_01939 PF00563 EAL domain J164_01939 PF00990 GGDEF domain J164_01939 PF01590 GAF domain J164_01940 PF00150 Cellulase (glycosyl hydrolase family 5) J164_01941 PF00072 Response regulator receiver domain J164_01941 PF02954 Bacterial regulatory protein, Fis family J164_01942 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_01943 PF04551 GcpE protein J164_01944 PF01569 PAP2 superfamily J164_01945 PF07690 Major Facilitator Superfamily J164_01946 PF01177 Asp/Glu/Hydantoin racemase J164_01947 PF00892 EamA-like transporter family J164_01948 PF01565 FAD binding domain J164_01948 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J164_01949 PF01180 Dihydroorotate dehydrogenase J164_01950 PF08241 Methyltransferase domain J164_01951 PF13828 J164_01951 J164_01952 PF00171 Aldehyde dehydrogenase family J164_01954 PF13994 J164_01954 J164_01955 PF13641 Glycosyltransferase like family 2 J164_01956 PF01522 Polysaccharide deacetylase J164_01956 PF14883 Hypothetical glycosyl hydrolase family 13 J164_01957 PF13432 Tetratricopeptide repeat J164_01957 PF14559 Tetratricopeptide repeat J164_01958 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J164_01958 PF08479 POTRA domain, ShlB-type J164_01958 PF17287 J164_01958 J164_01959 PF05594 J164_01959 J164_01959 PF05860 haemagglutination activity domain J164_01959 PF13332 J164_01959 J164_01960 PF05594 J164_01960 J164_01960 PF13332 J164_01960 J164_01962 PF05594 J164_01962 J164_01963 PF03073 TspO/MBR family J164_01964 PF00696 Amino acid kinase family J164_01964 PF00742 Homoserine dehydrogenase J164_01964 PF03447 Homoserine dehydrogenase, NAD binding domain J164_01964 PF13840 ACT domain J164_01965 PF00288 GHMP kinases N terminal domain J164_01965 PF08544 GHMP kinases C terminal J164_01966 PF07110 EthD domain J164_01967 PF00291 Pyridoxal-phosphate dependent enzyme J164_01967 PF14821 Threonine synthase N terminus J164_01968 PF13645 J164_01968 J164_01969 PF00027 Cyclic nucleotide-binding domain J164_01969 PF13545 Crp-like helix-turn-helix domain J164_01970 PF03129 Anticodon binding domain J164_01970 PF13393 Histidyl-tRNA synthetase J164_01971 PF01371 Trp repressor protein J164_01972 PF01634 ATP phosphoribosyltransferase J164_01972 PF08029 HisG, C-terminal domain J164_01973 PF00815 Histidinol dehydrogenase J164_01974 PF00155 Aminotransferase class I and II J164_01975 PF00475 Imidazoleglycerol-phosphate dehydratase J164_01975 PF13242 HAD-hyrolase-like J164_01976 PF00117 Glutamine amidotransferase class-I J164_01977 PF00977 Histidine biosynthesis protein J164_01978 PF00977 Histidine biosynthesis protein J164_01979 PF01502 Phosphoribosyl-AMP cyclohydrolase J164_01979 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J164_01980 PF00149 Calcineurin-like phosphoesterase J164_01980 PF16370 J164_01980 J164_01980 PF16371 J164_01980 J164_01981 PF01650 Peptidase C13 family J164_01983 PF03079 ARD/ARD' family J164_01984 PF00596 Class II Aldolase and Adducin N-terminal domain J164_01985 PF13520 Amino acid permease J164_01986 PF13520 Amino acid permease J164_01987 PF00293 NUDIX domain J164_01988 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J164_01988 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J164_01989 PF01565 FAD binding domain J164_01989 PF02913 FAD linked oxidases, C-terminal domain J164_01990 PF09498 J164_01990 J164_01991 PF13387 J164_01991 J164_01993 PF01132 Elongation factor P (EF-P) OB domain J164_01993 PF08207 Elongation factor P (EF-P) KOW-like domain J164_01993 PF09285 Elongation factor P, C-terminal J164_01994 PF00106 short chain dehydrogenase J164_01995 PF00682 HMGL-like J164_01996 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_01997 PF00378 Enoyl-CoA hydratase/isomerase family J164_01998 PF04023 FeoA domain J164_01999 PF02421 Ferrous iron transport protein B J164_01999 PF07664 J164_01999 J164_01999 PF07670 Nucleoside recognition J164_02002 PF00155 Aminotransferase class I and II J164_02003 PF03473 MOSC domain J164_02003 PF03475 3-alpha domain J164_02004 PF01113 Dihydrodipicolinate reductase, N-terminus J164_02004 PF05173 Dihydrodipicolinate reductase, C-terminus J164_02005 PF00117 Glutamine amidotransferase class-I J164_02005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J164_02007 PF02142 MGS-like domain J164_02007 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J164_02007 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J164_02008 PF01272 Transcription elongation factor, GreA/GreB, C-term J164_02008 PF03449 Transcription elongation factor, N-terminal J164_02010 PF01368 DHH family J164_02010 PF02272 DHHA1 domain J164_02011 PF05593 J164_02011 J164_02013 PF15649 J164_02013 J164_02017 PF01757 J164_02017 J164_02018 PF04397 LytTr DNA-binding domain J164_02019 PF00472 RF-1 domain J164_02019 PF03462 PCRF domain J164_02020 PF00152 tRNA synthetases class II (D, K and N) J164_02020 PF01336 OB-fold nucleic acid binding domain J164_02021 PF00072 Response regulator receiver domain J164_02021 PF01966 HD domain J164_02022 PF00072 Response regulator receiver domain J164_02022 PF00512 His Kinase A (phospho-acceptor) domain J164_02022 PF01627 Hpt domain J164_02022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02023 PF00378 Enoyl-CoA hydratase/isomerase family J164_02024 PF00501 AMP-binding enzyme J164_02024 PF13193 AMP-binding enzyme C-terminal domain J164_02026 PF00330 Aconitase family (aconitate hydratase) J164_02026 PF00694 Aconitase C-terminal domain J164_02027 PF04014 Antidote-toxin recognition MazE J164_02028 PF01850 PIN domain J164_02029 PF00330 Aconitase family (aconitate hydratase) J164_02029 PF06434 Aconitate hydratase 2 N-terminus J164_02029 PF11791 Aconitate B N-terminal domain J164_02030 PF00561 alpha/beta hydrolase fold J164_02031 PF00563 EAL domain J164_02031 PF00990 GGDEF domain J164_02031 PF13185 GAF domain J164_02031 PF13426 PAS domain J164_02032 PF00072 Response regulator receiver domain J164_02032 PF01339 CheB methylesterase J164_02033 PF03975 CheD chemotactic sensory transduction J164_02034 PF01739 CheR methyltransferase, SAM binding domain J164_02034 PF03705 CheR methyltransferase, all-alpha domain J164_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02035 PF00672 HAMP domain J164_02035 PF12729 J164_02035 J164_02036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02036 PF00672 HAMP domain J164_02037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02037 PF12729 J164_02037 J164_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02038 PF00672 HAMP domain J164_02038 PF05227 CHASE3 domain J164_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02039 PF00672 HAMP domain J164_02039 PF12729 J164_02039 J164_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02040 PF12729 J164_02040 J164_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02042 PF13557 J164_02042 J164_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02043 PF00672 HAMP domain J164_02043 PF02743 Cache domain J164_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02044 PF17200 J164_02044 J164_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02046 PF00672 HAMP domain J164_02046 PF12729 J164_02046 J164_02047 PF01584 CheW-like domain J164_02047 PF01627 Hpt domain J164_02047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02047 PF02895 Signal transducing histidine kinase, homodimeric domain J164_02048 PF00072 Response regulator receiver domain J164_02049 PF13466 STAS domain J164_02050 PF01584 CheW-like domain J164_02051 PF13614 AAA domain J164_02052 PF00691 OmpA family J164_02052 PF13677 J164_02052 J164_02053 PF01618 J164_02053 J164_02055 PF00593 TonB dependent receptor J164_02055 PF07715 TonB-dependent Receptor Plug Domain J164_02056 PF00069 Protein kinase domain J164_02059 PF08845 J164_02059 J164_02061 PF01609 Transposase DDE domain J164_02064 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J164_02065 PF00665 Integrase core domain J164_02065 PF13276 J164_02065 J164_02066 PF01527 Transposase J164_02069 PF13683 J164_02069 J164_02070 PF01381 Helix-turn-helix J164_02072 PF04055 Radical SAM superfamily J164_02072 PF13353 4Fe-4S single cluster domain J164_02074 PF01609 Transposase DDE domain J164_02075 PF01584 CheW-like domain J164_02075 PF01627 Hpt domain J164_02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02075 PF02895 Signal transducing histidine kinase, homodimeric domain J164_02076 PF04344 Chemotaxis phosphatase, CheZ J164_02077 PF00072 Response regulator receiver domain J164_02078 PF04539 Sigma-70 region 3 J164_02078 PF04542 Sigma-70 region 2 J164_02078 PF04545 Sigma-70, region 4 J164_02079 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_02080 PF00448 SRP54-type protein, GTPase domain J164_02081 PF00771 FHIPEP family J164_02082 PF01312 FlhB HrpN YscU SpaS Family J164_02083 PF00563 EAL domain J164_02083 PF00990 GGDEF domain J164_02083 PF03707 J164_02083 J164_02084 PF00990 GGDEF domain J164_02084 PF07495 Y_Y_Y domain J164_02085 PF00990 GGDEF domain J164_02085 PF07494 Two component regulator propeller J164_02085 PF07495 Y_Y_Y domain J164_02086 PF01311 J164_02086 J164_02087 PF01313 J164_02087 J164_02089 PF00813 J164_02089 J164_02090 PF04347 J164_02090 J164_02091 PF01052 Surface presentation of antigens (SPOA) J164_02092 PF01052 Surface presentation of antigens (SPOA) J164_02092 PF02154 Flagellar motor switch protein FliM J164_02093 PF03748 J164_02093 J164_02094 PF02120 Flagellar hook-length control protein FliK J164_02095 PF02050 Flagellar FliJ protein J164_02096 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J164_02097 PF02108 J164_02097 J164_02098 PF01706 FliG C-terminal domain J164_02098 PF14841 FliG middle domain J164_02098 PF14842 FliG N-terminal domain J164_02099 PF01514 Secretory protein of YscJ/FliF family J164_02099 PF08345 J164_02099 J164_02100 PF02049 J164_02100 J164_02101 PF00535 Glycosyl transferase family 2 J164_02103 PF05050 Methyltransferase FkbM domain J164_02104 PF00132 Bacterial transferase hexapeptide (six repeats) J164_02105 PF00355 Rieske [2Fe-2S] domain J164_02105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J164_02106 PF00132 Bacterial transferase hexapeptide (six repeats) J164_02106 PF14602 Hexapeptide repeat of succinyl-transferase J164_02107 PF13561 Enoyl-(Acyl carrier protein) reductase J164_02108 PF13561 Enoyl-(Acyl carrier protein) reductase J164_02109 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J164_02109 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J164_02111 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J164_02112 PF00158 Sigma-54 interaction domain J164_02112 PF02954 Bacterial regulatory protein, Fis family J164_02112 PF06490 J164_02112 J164_02113 PF00072 Response regulator receiver domain J164_02114 PF00309 J164_02114 J164_02114 PF04552 Sigma-54, DNA binding domain J164_02114 PF04963 Sigma-54 factor, core binding domain J164_02115 PF00072 Response regulator receiver domain J164_02115 PF00196 Bacterial regulatory proteins, luxR family J164_02116 PF16823 J164_02116 J164_02118 PF02561 Flagellar protein FliS J164_02119 PF02465 J164_02119 J164_02119 PF07195 J164_02119 J164_02119 PF07196 Flagellin hook IN motif J164_02120 PF00669 Bacterial flagellin N-terminal helical region J164_02120 PF00700 Bacterial flagellin C-terminal helical region J164_02120 PF07196 Flagellin hook IN motif J164_02121 PF00669 Bacterial flagellin N-terminal helical region J164_02121 PF00700 Bacterial flagellin C-terminal helical region J164_02122 PF00460 Flagella basal body rod protein J164_02122 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J164_02123 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J164_02123 PF10135 J164_02123 J164_02124 PF02119 J164_02124 J164_02125 PF02107 J164_02125 J164_02126 PF00460 Flagella basal body rod protein J164_02126 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J164_02127 PF00460 Flagella basal body rod protein J164_02127 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J164_02128 PF00460 Flagella basal body rod protein J164_02128 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J164_02128 PF07559 Flagellar basal body protein FlaE J164_02129 PF03963 J164_02129 J164_02129 PF13860 FlgD Ig-like domain J164_02129 PF13861 FlgD Tudor-like domain J164_02130 PF00460 Flagella basal body rod protein J164_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J164_02131 PF00460 Flagella basal body rod protein J164_02132 PF00072 Response regulator receiver domain J164_02132 PF01584 CheW-like domain J164_02133 PF13144 SAF-like J164_02134 PF04316 Anti-sigma-28 factor, FlgM J164_02136 PF00512 His Kinase A (phospho-acceptor) domain J164_02136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02137 PF00072 Response regulator receiver domain J164_02137 PF00563 EAL domain J164_02137 PF00990 GGDEF domain J164_02138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02138 PF07730 Histidine kinase J164_02138 PF08448 PAS fold J164_02138 PF13426 PAS domain J164_02139 PF00563 EAL domain J164_02139 PF00990 GGDEF domain J164_02139 PF08447 PAS fold J164_02139 PF13426 PAS domain J164_02141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02142 PF04356 Protein of unknown function (DUF489) J164_02143 PF03054 tRNA methyl transferase J164_02144 PF00293 NUDIX domain J164_02145 PF02617 ATP-dependent Clp protease adaptor protein ClpS J164_02146 PF00004 ATPase family associated with various cellular activities (AAA) J164_02146 PF02861 Clp amino terminal domain J164_02146 PF07724 AAA domain (Cdc48 subfamily) J164_02146 PF10431 C-terminal, D2-small domain, of ClpB protein J164_02147 PF01176 Translation initiation factor 1A / IF-1 J164_02148 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J164_02149 PF04339 J164_02149 J164_02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_02151 PF01580 FtsK/SpoIIIE family J164_02151 PF09397 Ftsk gamma domain J164_02151 PF13491 J164_02151 J164_02152 PF01841 Transglutaminase-like superfamily J164_02152 PF12969 Domain of Unknown Function with PDB structure (DUF3857) J164_02153 PF03548 Outer membrane lipoprotein carrier protein LolA J164_02155 PF00004 ATPase family associated with various cellular activities (AAA) J164_02155 PF12002 MgsA AAA+ ATPase C terminal J164_02155 PF16193 J164_02155 J164_02157 PF02537 J164_02157 J164_02159 PF00108 Thiolase, N-terminal domain J164_02159 PF02803 Thiolase, C-terminal domain J164_02160 PF00378 Enoyl-CoA hydratase/isomerase family J164_02160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J164_02160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J164_02161 PF00440 Bacterial regulatory proteins, tetR family J164_02162 PF00334 Nucleoside diphosphate kinase J164_02163 PF04055 Radical SAM superfamily J164_02164 PF13432 Tetratricopeptide repeat J164_02165 PF13413 Helix-turn-helix domain J164_02165 PF13464 J164_02165 J164_02166 PF09976 Tetratricopeptide repeat J164_02167 PF13360 PQQ-like domain J164_02168 PF01926 50S ribosome-binding GTPase J164_02168 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J164_02169 PF00994 Probable molybdopterin binding domain J164_02169 PF03453 MoeA N-terminal region (domain I and II) J164_02169 PF03454 MoeA C-terminal region (domain IV) J164_02170 PF00581 Rhodanese-like domain J164_02170 PF00899 ThiF family J164_02171 PF00593 TonB dependent receptor J164_02171 PF07715 TonB-dependent Receptor Plug Domain J164_02173 PF13628 J164_02173 J164_02175 PF00107 Zinc-binding dehydrogenase J164_02175 PF08240 Alcohol dehydrogenase GroES-like domain J164_02175 PF13823 Alcohol dehydrogenase GroES-associated J164_02176 PF06884 J164_02176 J164_02177 PF03372 Endonuclease/Exonuclease/phosphatase family J164_02178 PF04193 PQ loop repeat J164_02179 PF00994 Probable molybdopterin binding domain J164_02179 PF03453 MoeA N-terminal region (domain I and II) J164_02179 PF03454 MoeA C-terminal region (domain IV) J164_02180 PF12804 MobA-like NTP transferase domain J164_02182 PF12697 Alpha/beta hydrolase family J164_02183 PF01566 J164_02183 J164_02184 PF01325 Iron dependent repressor, N-terminal DNA binding domain J164_02184 PF02742 Iron dependent repressor, metal binding and dimerisation domain J164_02185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J164_02186 PF00929 Exonuclease J164_02187 PF00924 Mechanosensitive ion channel J164_02188 PF00391 PEP-utilising enzyme, mobile domain J164_02188 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J164_02188 PF02896 PEP-utilising enzyme, TIM barrel domain J164_02189 PF03618 J164_02189 J164_02190 PF06853 J164_02190 J164_02191 PF00293 NUDIX domain J164_02192 PF13561 Enoyl-(Acyl carrier protein) reductase J164_02193 PF01066 CDP-alcohol phosphatidyltransferase J164_02194 PF09712 J164_02194 J164_02195 PF00561 alpha/beta hydrolase fold J164_02196 PF04024 J164_02196 J164_02198 PF01266 FAD dependent oxidoreductase J164_02200 PF00575 S1 RNA binding domain J164_02200 PF09371 Tex-like protein N-terminal domain J164_02200 PF12836 Helix-hairpin-helix motif J164_02200 PF16921 J164_02200 J164_02201 PF00072 Response regulator receiver domain J164_02201 PF00512 His Kinase A (phospho-acceptor) domain J164_02201 PF01590 GAF domain J164_02201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02201 PF08447 PAS fold J164_02201 PF08448 PAS fold J164_02201 PF13185 GAF domain J164_02209 PF00034 Cytochrome c J164_02210 PF00034 Cytochrome c J164_02211 PF00529 HlyD family secretion protein J164_02211 PF16576 J164_02211 J164_02212 PF00873 AcrB/AcrD/AcrF family J164_02213 PF00873 AcrB/AcrD/AcrF family J164_02214 PF01081 KDPG and KHG aldolase J164_02215 PF00920 Dehydratase family J164_02216 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J164_02217 PF02685 Glucokinase J164_02218 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J164_02218 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J164_02219 PF00005 ABC transporter J164_02219 PF08402 TOBE domain J164_02220 PF01571 Aminomethyltransferase folate-binding domain J164_02220 PF08669 Glycine cleavage T-protein C-terminal barrel domain J164_02221 PF07896 Protein of unknown function (DUF1674) J164_02222 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J164_02223 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J164_02224 PF00890 FAD binding domain J164_02224 PF02910 Fumarate reductase flavoprotein C-term J164_02226 PF13085 2Fe-2S iron-sulfur cluster binding domain J164_02226 PF13534 4Fe-4S dicluster domain J164_02227 PF03937 Flavinator of succinate dehydrogenase J164_02229 PF02687 J164_02229 J164_02229 PF12704 MacB-like periplasmic core domain J164_02230 PF00005 ABC transporter J164_02231 PF01370 NAD dependent epimerase/dehydratase family J164_02232 PF00753 Metallo-beta-lactamase superfamily J164_02232 PF03772 J164_02232 J164_02232 PF13567 J164_02232 J164_02233 PF01618 J164_02233 J164_02234 PF02472 Biopolymer transport protein ExbD/TolR J164_02235 PF00005 ABC transporter J164_02235 PF00664 ABC transporter transmembrane region J164_02236 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J164_02237 PF02348 Cytidylyltransferase J164_02238 PF01451 Low molecular weight phosphotyrosine protein phosphatase J164_02239 PF01436 NHL repeat J164_02240 PF01541 GIY-YIG catalytic domain J164_02240 PF02151 UvrB/uvrC motif J164_02240 PF08459 UvrC Helix-hairpin-helix N-terminal J164_02241 PF01066 CDP-alcohol phosphatidyltransferase J164_02245 PF00501 AMP-binding enzyme J164_02245 PF00550 Phosphopantetheine attachment site J164_02245 PF00668 Condensation domain J164_02245 PF13193 AMP-binding enzyme C-terminal domain J164_02246 PF00501 AMP-binding enzyme J164_02246 PF00550 Phosphopantetheine attachment site J164_02246 PF00668 Condensation domain J164_02246 PF00975 Thioesterase domain J164_02246 PF13193 AMP-binding enzyme C-terminal domain J164_02247 PF00665 Integrase core domain J164_02248 PF01527 Transposase J164_02249 PF00665 Integrase core domain J164_02249 PF13276 J164_02249 J164_02250 PF01527 Transposase J164_02251 PF00589 Phage integrase family J164_02253 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J164_02253 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J164_02253 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J164_02254 PF03486 HI0933-like protein J164_02255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J164_02257 PF00581 Rhodanese-like domain J164_02258 PF00072 Response regulator receiver domain J164_02258 PF00196 Bacterial regulatory proteins, luxR family J164_02259 PF00575 S1 RNA binding domain J164_02259 PF10150 Ribonuclease E/G family J164_02260 PF00849 RNA pseudouridylate synthase J164_02260 PF01479 S4 domain J164_02261 PF11737 J164_02261 J164_02262 PF02535 J164_02262 J164_02263 PF03544 Gram-negative bacterial TonB protein C-terminal J164_02264 PF01329 Pterin 4 alpha carbinolamine dehydratase J164_02265 PF01106 NifU-like domain J164_02268 PF04940 Sensors of blue-light using FAD J164_02269 PF01596 O-methyltransferase J164_02270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_02271 PF02585 GlcNAc-PI de-N-acetylase J164_02272 PF05401 Nodulation protein S (NodS) J164_02273 PF00535 Glycosyl transferase family 2 J164_02274 PF12697 Alpha/beta hydrolase family J164_02274 PF13618 J164_02274 J164_02275 PF00732 GMC oxidoreductase J164_02275 PF05199 GMC oxidoreductase J164_02276 PF13561 Enoyl-(Acyl carrier protein) reductase J164_02279 PF00665 Integrase core domain J164_02279 PF13276 J164_02279 J164_02280 PF01527 Transposase J164_02282 PF09335 J164_02282 J164_02285 PF07995 Glucose / Sorbosone dehydrogenase J164_02287 PF00144 Beta-lactamase J164_02288 PF00072 Response regulator receiver domain J164_02288 PF04397 LytTr DNA-binding domain J164_02289 PF06580 J164_02289 J164_02291 PF00082 Subtilase family J164_02291 PF03797 Autotransporter beta-domain J164_02291 PF12951 J164_02291 J164_02292 PF16576 J164_02292 J164_02293 PF00873 AcrB/AcrD/AcrF family J164_02294 PF02321 Outer membrane efflux protein J164_02295 PF00512 His Kinase A (phospho-acceptor) domain J164_02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02296 PF00072 Response regulator receiver domain J164_02296 PF00196 Bacterial regulatory proteins, luxR family J164_02297 PF12951 J164_02297 J164_02297 PF13018 J164_02297 J164_02298 PF00563 EAL domain J164_02299 PF07081 Protein of unknown function (DUF1349) J164_02300 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J164_02301 PF05974 Domain of unknown function (DUF892) J164_02302 PF10685 J164_02302 J164_02303 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J164_02303 PF03861 ANTAR domain J164_02305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J164_02305 PF10414 Sirohaem synthase dimerisation region J164_02305 PF13241 Putative NAD(P)-binding J164_02305 PF14824 Sirohaem biosynthesis protein central J164_02308 PF05977 Transmembrane secretion effector J164_02309 PF07969 Amidohydrolase family J164_02310 PF07681 J164_02310 J164_02311 PF00857 Isochorismatase family J164_02312 PF12833 Helix-turn-helix domain J164_02313 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02313 PF07495 Y_Y_Y domain J164_02313 PF07730 Histidine kinase J164_02314 PF00072 Response regulator receiver domain J164_02314 PF00196 Bacterial regulatory proteins, luxR family J164_02315 PF17201 J164_02315 J164_02317 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_02317 PF03466 LysR substrate binding domain J164_02318 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_02318 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J164_02319 PF10070 J164_02319 J164_02320 PF00665 Integrase core domain J164_02320 PF13276 J164_02320 J164_02321 PF01527 Transposase J164_02322 PF13560 Helix-turn-helix domain J164_02323 PF05284 J164_02323 J164_02324 PF04002 RadC-like JAB domain J164_02325 PF05930 Prophage CP4-57 regulatory protein (AlpA) J164_02327 PF08843 Nucleotidyl transferase of unknown function (DUF1814) J164_02328 PF11459 J164_02328 J164_02328 PF17194 J164_02328 J164_02329 PF00589 Phage integrase family J164_02329 PF13356 Domain of unknown function (DUF4102) J164_02329 PF14659 Phage integrase, N-terminal SAM-like domain J164_02332 PF00593 TonB dependent receptor J164_02332 PF07715 TonB-dependent Receptor Plug Domain J164_02333 PF07916 J164_02333 J164_02334 PF12553 J164_02334 J164_02335 PF01850 PIN domain J164_02336 PF04014 Antidote-toxin recognition MazE J164_02337 PF16263 J164_02337 J164_02339 PF04542 Sigma-70 region 2 J164_02339 PF08281 Sigma-70, region 4 J164_02340 PF04773 FecR protein J164_02340 PF16220 J164_02340 J164_02341 PF00593 TonB dependent receptor J164_02341 PF07715 TonB-dependent Receptor Plug Domain J164_02344 PF10947 J164_02344 J164_02345 PF07514 Putative helicase J164_02345 PF07515 Protein of unknown function (DUF1528) J164_02346 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J164_02346 PF05345 Putative Ig domain J164_02346 PF06594 J164_02346 J164_02347 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J164_02350 PF13437 HlyD family secretion protein J164_02350 PF13533 Biotin-lipoyl like J164_02351 PF00005 ABC transporter J164_02351 PF00664 ABC transporter transmembrane region J164_02352 PF05930 Prophage CP4-57 regulatory protein (AlpA) J164_02353 PF13614 AAA domain J164_02356 PF11198 J164_02356 J164_02358 PF08900 J164_02358 J164_02359 PF11358 J164_02359 J164_02360 PF00436 Single-strand binding protein family J164_02361 PF01131 DNA topoisomerase J164_02361 PF01396 J164_02361 J164_02361 PF01751 Toprim domain J164_02362 PF00145 C-5 cytosine-specific DNA methylase J164_02364 PF13304 AAA domain J164_02372 PF11284 J164_02372 J164_02373 PF00589 Phage integrase family J164_02373 PF13356 Domain of unknown function (DUF4102) J164_02373 PF14659 Phage integrase, N-terminal SAM-like domain J164_02374 PF06250 J164_02374 J164_02375 PF01527 Transposase J164_02376 PF00665 Integrase core domain J164_02376 PF13276 J164_02376 J164_02377 PF00892 EamA-like transporter family J164_02378 PF00892 EamA-like transporter family J164_02379 PF00440 Bacterial regulatory proteins, tetR family J164_02380 PF02525 Flavodoxin-like fold J164_02381 PF00043 Glutathione S-transferase, C-terminal domain J164_02381 PF13417 Glutathione S-transferase, N-terminal domain J164_02382 PF05544 Proline racemase J164_02383 PF03358 NADPH-dependent FMN reductase J164_02383 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease J164_02384 PF13561 Enoyl-(Acyl carrier protein) reductase J164_02385 PF07690 Major Facilitator Superfamily J164_02386 PF12833 Helix-turn-helix domain J164_02388 PF12101 J164_02388 J164_02389 PF11679 J164_02389 J164_02395 PF00271 Helicase conserved C-terminal domain J164_02398 PF07791 J164_02398 J164_02399 PF14412 J164_02399 J164_02408 PF01464 Transglycosylase SLT domain J164_02409 PF11072 J164_02409 J164_02410 PF12696 TraM recognition site of TraD and TraG J164_02411 PF14348 J164_02411 J164_02412 PF12532 J164_02412 J164_02412 PF13476 AAA domain J164_02416 PF13245 Part of AAA domain J164_02416 PF13361 UvrD-like helicase C-terminal domain J164_02421 PF09686 J164_02421 J164_02422 PF11660 J164_02422 J164_02423 PF11190 J164_02423 J164_02424 PF11990 J164_02424 J164_02425 PF11444 J164_02425 J164_02426 PF11920 J164_02426 J164_02429 PF11130 J164_02429 J164_02430 PF13462 Thioredoxin J164_02431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_02431 PF03466 LysR substrate binding domain J164_02432 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J164_02432 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J164_02433 PF03401 Tripartite tricarboxylate transporter family receptor J164_02434 PF06684 Amino acid synthesis J164_02437 PF04002 RadC-like JAB domain J164_02438 PF07511 J164_02438 J164_02439 PF06834 J164_02439 J164_02441 PF01507 Phosphoadenosine phosphosulfate reductase family J164_02443 PF05930 Prophage CP4-57 regulatory protein (AlpA) J164_02444 PF00589 Phage integrase family J164_02444 PF13356 Domain of unknown function (DUF4102) J164_02444 PF14659 Phage integrase, N-terminal SAM-like domain J164_02445 PF00117 Glutamine amidotransferase class-I J164_02445 PF00958 GMP synthase C terminal domain J164_02445 PF02540 NAD synthase J164_02446 PF00478 IMP dehydrogenase / GMP reductase domain J164_02446 PF00571 CBS domain J164_02447 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J164_02447 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J164_02448 PF06844 Protein of unknown function (DUF1244) J164_02449 PF00999 Sodium/hydrogen exchanger family J164_02449 PF02254 TrkA-N domain J164_02450 PF00483 Nucleotidyl transferase J164_02451 PF02719 Polysaccharide biosynthesis protein J164_02451 PF13727 CoA-binding domain J164_02452 PF00953 Glycosyl transferase family 4 J164_02453 PF13432 Tetratricopeptide repeat J164_02454 PF06305 J164_02454 J164_02455 PF00216 Bacterial DNA-binding protein J164_02456 PF00575 S1 RNA binding domain J164_02457 PF02224 Cytidylate kinase J164_02458 PF00444 Ribosomal protein L36 J164_02461 PF04371 Porphyromonas-type peptidyl-arginine deiminase J164_02462 PF00795 Carbon-nitrogen hydrolase J164_02463 PF13420 Acetyltransferase (GNAT) domain J164_02464 PF01963 J164_02464 J164_02465 PF03372 Endonuclease/Exonuclease/phosphatase family J164_02466 PF00754 F5/8 type C domain J164_02466 PF06202 Amylo-alpha-1,6-glucosidase J164_02467 PF00528 Binding-protein-dependent transport system inner membrane component J164_02468 PF00528 Binding-protein-dependent transport system inner membrane component J164_02469 PF13416 Bacterial extracellular solute-binding protein J164_02470 PF10091 Putative glucoamylase J164_02471 PF00593 TonB dependent receptor J164_02471 PF13620 Carboxypeptidase regulatory-like domain J164_02472 PF00356 Bacterial regulatory proteins, lacI family J164_02472 PF13377 Periplasmic binding protein-like domain J164_02473 PF01722 BolA-like protein J164_02474 PF03795 YCII-related domain J164_02475 PF02616 ScpA/B protein J164_02476 PF04079 Putative transcriptional regulators (Ypuh-like) J164_02477 PF00849 RNA pseudouridylate synthase J164_02477 PF01479 S4 domain J164_02479 PF05096 Glutamine cyclotransferase J164_02480 PF00795 Carbon-nitrogen hydrolase J164_02481 PF00155 Aminotransferase class I and II J164_02482 PF00005 ABC transporter J164_02483 PF03379 J164_02483 J164_02484 PF01578 J164_02484 J164_02485 PF04995 J164_02485 J164_02486 PF03100 CcmE J164_02487 PF01578 J164_02487 J164_02487 PF16327 J164_02487 J164_02488 PF08534 Redoxin J164_02489 PF03918 Cytochrome C biogenesis protein J164_02490 PF13432 Tetratricopeptide repeat J164_02491 PF00561 alpha/beta hydrolase fold J164_02492 PF00313 'Cold-shock' DNA-binding domain J164_02492 PF06961 J164_02492 J164_02493 PF00005 ABC transporter J164_02493 PF00664 ABC transporter transmembrane region J164_02494 PF00005 ABC transporter J164_02494 PF00664 ABC transporter transmembrane region J164_02495 PF01654 J164_02495 J164_02496 PF02322 J164_02496 J164_02497 PF08173 J164_02497 J164_02499 PF07690 Major Facilitator Superfamily J164_02500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J164_02500 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J164_02501 PF00171 Aldehyde dehydrogenase family J164_02502 PF00696 Amino acid kinase family J164_02502 PF01472 PUA domain J164_02503 PF03795 YCII-related domain J164_02504 PF00206 Lyase J164_02505 PF01118 Semialdehyde dehydrogenase, NAD binding domain J164_02506 PF13302 Acetyltransferase (GNAT) domain J164_02507 PF00696 Amino acid kinase family J164_02507 PF04768 Protein of unknown function (DUF619) J164_02508 PF01546 Peptidase family M20/M25/M40 J164_02508 PF07687 Peptidase dimerisation domain J164_02509 PF13508 Acetyltransferase (GNAT) domain J164_02510 PF00764 Arginosuccinate synthase J164_02511 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J164_02511 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J164_02513 PF01406 tRNA synthetases class I (C) catalytic domain J164_02513 PF09190 DALR domain J164_02514 PF02657 Fe-S metabolism associated domain J164_02515 PF05977 Transmembrane secretion effector J164_02516 PF01258 Prokaryotic dksA/traR C4-type zinc finger J164_02517 PF01809 J164_02517 J164_02518 PF01979 Amidohydrolase family J164_02519 PF01551 Peptidase family M23 J164_02520 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_02521 PF13520 Amino acid permease J164_02522 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J164_02523 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J164_02525 PF00753 Metallo-beta-lactamase superfamily J164_02526 PF16242 J164_02526 J164_02529 PF01527 Transposase J164_02530 PF00544 Pectate lyase J164_02532 PF00295 Glycosyl hydrolases family 28 J164_02534 PF13419 Haloacid dehalogenase-like hydrolase J164_02535 PF13489 Methyltransferase domain J164_02536 PF01979 Amidohydrolase family J164_02538 PF01132 Elongation factor P (EF-P) OB domain J164_02538 PF08207 Elongation factor P (EF-P) KOW-like domain J164_02538 PF09285 Elongation factor P, C-terminal J164_02539 PF13353 4Fe-4S single cluster domain J164_02540 PF00563 EAL domain J164_02540 PF00672 HAMP domain J164_02540 PF00990 GGDEF domain J164_02540 PF17203 J164_02540 J164_02541 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein J164_02542 PF00588 SpoU rRNA Methylase family J164_02543 PF00459 Inositol monophosphatase family J164_02544 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J164_02544 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J164_02545 PF00545 ribonuclease J164_02546 PF01337 Barstar (barnase inhibitor) J164_02547 PF00005 ABC transporter J164_02547 PF12848 ABC transporter J164_02547 PF16326 J164_02547 J164_02548 PF00270 DEAD/DEAH box helicase J164_02548 PF00271 Helicase conserved C-terminal domain J164_02548 PF03880 DbpA RNA binding domain J164_02549 PF00156 Phosphoribosyl transferase domain J164_02550 PF02696 J164_02550 J164_02551 PF07859 alpha/beta hydrolase fold J164_02552 PF00043 Glutathione S-transferase, C-terminal domain J164_02552 PF02798 Glutathione S-transferase, N-terminal domain J164_02553 PF00313 'Cold-shock' DNA-binding domain J164_02554 PF07152 YaeQ protein J164_02555 PF03486 HI0933-like protein J164_02556 PF00563 EAL domain J164_02556 PF00990 GGDEF domain J164_02556 PF13188 PAS domain J164_02557 PF01435 Peptidase family M48 J164_02558 PF00749 tRNA synthetases class I (E and Q), catalytic domain J164_02559 PF00106 short chain dehydrogenase J164_02560 PF05233 J164_02560 J164_02560 PF07879 J164_02560 J164_02561 PF01963 J164_02561 J164_02562 PF07920 Protein of unknown function (DUF1684) J164_02563 PF01119 DNA mismatch repair protein, C-terminal domain J164_02563 PF08676 MutL C terminal dimerisation domain J164_02563 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02564 PF01520 N-acetylmuramoyl-L-alanine amidase J164_02564 PF11741 AMIN domain J164_02565 PF02367 Uncharacterised P-loop hydrolase UPF0079 J164_02566 PF01256 Carbohydrate kinase J164_02566 PF03853 YjeF-related protein N-terminus J164_02567 PF08331 J164_02567 J164_02567 PF13484 J164_02567 J164_02568 PF02601 J164_02568 J164_02568 PF13742 J164_02568 J164_02569 PF06057 Bacterial virulence protein (VirJ) J164_02570 PF03781 Sulfatase-modifying factor enzyme 1 J164_02571 PF00570 HRDC domain J164_02571 PF01612 3'-5' exonuclease J164_02573 PF01068 ATP dependent DNA ligase domain J164_02573 PF04679 ATP dependent DNA ligase C terminal region J164_02573 PF13298 DNA polymerase Ligase (LigD) J164_02574 PF12244 J164_02574 J164_02575 PF00816 H-NS histone family J164_02577 PF00589 Phage integrase family J164_02581 PF01609 Transposase DDE domain J164_02581 PF05598 J164_02581 J164_02582 PF00665 Integrase core domain J164_02583 PF01527 Transposase J164_02587 PF01402 Ribbon-helix-helix protein, copG family J164_02588 PF01526 J164_02588 J164_02591 PF00665 Integrase core domain J164_02591 PF13276 J164_02591 J164_02593 PF00239 Resolvase, N terminal domain J164_02594 PF13166 J164_02594 J164_02596 PF02384 N-6 DNA Methylase J164_02597 PF09572 J164_02597 J164_02599 PF07929 Plasmid pRiA4b ORF-3-like protein J164_02601 PF01402 Ribbon-helix-helix protein, copG family J164_02603 PF04796 J164_02603 J164_02604 PF13289 J164_02604 J164_02605 PF01935 Domain of unknown function DUF87 J164_02608 PF00990 GGDEF domain J164_02609 PF01584 CheW-like domain J164_02610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_02610 PF00672 HAMP domain J164_02610 PF12729 J164_02610 J164_02611 PF02245 Methylpurine-DNA glycosylase (MPG) J164_02612 PF00270 DEAD/DEAH box helicase J164_02612 PF00271 Helicase conserved C-terminal domain J164_02612 PF08494 J164_02612 J164_02613 PF11743 J164_02613 J164_02615 PF04386 Stringent starvation protein B J164_02616 PF00043 Glutathione S-transferase, C-terminal domain J164_02616 PF13417 Glutathione S-transferase, N-terminal domain J164_02617 PF02167 Cytochrome C1 family J164_02618 PF00032 Cytochrome b(C-terminal)/b6/petD J164_02618 PF00033 Cytochrome b(N-terminal)/b6/petB J164_02619 PF00355 Rieske [2Fe-2S] domain J164_02619 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J164_02620 PF01464 Transglycosylase SLT domain J164_02621 PF08279 HTH domain J164_02621 PF13280 J164_02621 J164_02622 PF02798 Glutathione S-transferase, N-terminal domain J164_02623 PF00919 Uncharacterized protein family UPF0004 J164_02623 PF01938 TRAM domain J164_02623 PF04055 Radical SAM superfamily J164_02624 PF02562 PhoH-like protein J164_02626 PF02130 Uncharacterized protein family UPF0054 J164_02628 PF00571 CBS domain J164_02628 PF03471 Transporter associated domain J164_02629 PF13387 J164_02629 J164_02630 PF01544 CorA-like Mg2+ transporter protein J164_02631 PF00171 Aldehyde dehydrogenase family J164_02632 PF00528 Binding-protein-dependent transport system inner membrane component J164_02633 PF00528 Binding-protein-dependent transport system inner membrane component J164_02634 PF00005 ABC transporter J164_02634 PF08402 TOBE domain J164_02635 PF02321 Outer membrane efflux protein J164_02636 PF07690 Major Facilitator Superfamily J164_02637 PF13533 Biotin-lipoyl like J164_02637 PF16576 J164_02637 J164_02638 PF13416 Bacterial extracellular solute-binding protein J164_02639 PF00202 Aminotransferase class-III J164_02640 PF00120 Glutamine synthetase, catalytic domain J164_02641 PF07722 Peptidase C26 J164_02642 PF00120 Glutamine synthetase, catalytic domain J164_02643 PF01266 FAD dependent oxidoreductase J164_02644 PF00072 Response regulator receiver domain J164_02644 PF00990 GGDEF domain J164_02645 PF01814 Hemerythrin HHE cation binding domain J164_02646 PF00083 Sugar (and other) transporter J164_02646 PF07690 Major Facilitator Superfamily J164_02648 PF00384 Molybdopterin oxidoreductase J164_02648 PF01568 Molydopterin dinucleotide binding domain J164_02649 PF02634 FdhD/NarQ family J164_02650 PF07690 Major Facilitator Superfamily J164_02651 PF00202 Aminotransferase class-III J164_02653 PF04286 J164_02653 J164_02654 PF00072 Response regulator receiver domain J164_02654 PF00512 His Kinase A (phospho-acceptor) domain J164_02654 PF01627 Hpt domain J164_02654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02654 PF03924 CHASE domain J164_02654 PF13426 PAS domain J164_02655 PF00072 Response regulator receiver domain J164_02655 PF13487 HD domain J164_02656 PF07690 Major Facilitator Superfamily J164_02657 PF05088 J164_02657 J164_02657 PF12466 J164_02657 J164_02658 PF00440 Bacterial regulatory proteins, tetR family J164_02658 PF14246 AefR-like transcriptional repressor, C-terminal region J164_02659 PF16576 J164_02659 J164_02660 PF00873 AcrB/AcrD/AcrF family J164_02661 PF00356 Bacterial regulatory proteins, lacI family J164_02661 PF13377 Periplasmic binding protein-like domain J164_02662 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J164_02662 PF00381 PTS HPr component phosphorylation site J164_02662 PF00391 PEP-utilising enzyme, mobile domain J164_02662 PF02896 PEP-utilising enzyme, TIM barrel domain J164_02662 PF05524 PEP-utilising enzyme, N-terminal J164_02663 PF00294 pfkB family carbohydrate kinase J164_02664 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J164_02665 PF04966 Carbohydrate-selective porin, OprB family J164_02670 PF07791 J164_02670 J164_02672 PF02355 Protein export membrane protein J164_02672 PF07549 SecD/SecF GG Motif J164_02673 PF02355 Protein export membrane protein J164_02673 PF07549 SecD/SecF GG Motif J164_02673 PF13721 SecD export protein N-terminal TM region J164_02674 PF02699 Preprotein translocase subunit J164_02675 PF01702 Queuine tRNA-ribosyltransferase J164_02676 PF02547 Queuosine biosynthesis protein J164_02677 PF01037 AsnC family J164_02677 PF13412 Winged helix-turn-helix DNA-binding J164_02678 PF00202 Aminotransferase class-III J164_02679 PF04488 Glycosyltransferase sugar-binding region containing DXD motif J164_02681 PF00149 Calcineurin-like phosphoesterase J164_02681 PF16656 J164_02681 J164_02682 PF02333 Phytase J164_02683 PF00593 TonB dependent receptor J164_02683 PF07715 TonB-dependent Receptor Plug Domain J164_02684 PF14681 Uracil phosphoribosyltransferase J164_02685 PF00759 Glycosyl hydrolase family 9 J164_02685 PF02927 N-terminal ig-like domain of cellulase J164_02686 PF01019 Gamma-glutamyltranspeptidase J164_02687 PF00037 4Fe-4S binding domain J164_02690 PF01467 Cytidylyltransferase J164_02691 PF03602 Conserved hypothetical protein 95 J164_02692 PF00183 Hsp90 protein J164_02692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02693 PF05593 J164_02693 J164_02693 PF14220 J164_02693 J164_02695 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) J164_02696 PF00593 TonB dependent receptor J164_02696 PF07715 TonB-dependent Receptor Plug Domain J164_02697 PF00326 Prolyl oligopeptidase family J164_02697 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J164_02698 PF04616 Glycosyl hydrolases family 43 J164_02699 PF00754 F5/8 type C domain J164_02699 PF07532 J164_02699 J164_02700 PF00593 TonB dependent receptor J164_02700 PF07715 TonB-dependent Receptor Plug Domain J164_02702 PF00082 Subtilase family J164_02702 PF09286 Pro-kumamolisin, activation domain J164_02706 PF01301 Glycosyl hydrolases family 35 J164_02707 PF00326 Prolyl oligopeptidase family J164_02707 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J164_02708 PF13520 Amino acid permease J164_02709 PF05960 Bacterial protein of unknown function (DUF885) J164_02710 PF05960 Bacterial protein of unknown function (DUF885) J164_02711 PF00557 Metallopeptidase family M24 J164_02711 PF01321 Creatinase/Prolidase N-terminal domain J164_02712 PF00171 Aldehyde dehydrogenase family J164_02713 PF00701 Dihydrodipicolinate synthetase family J164_02714 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_02715 PF13510 2Fe-2S iron-sulfur cluster binding domain J164_02716 PF01266 FAD dependent oxidoreductase J164_02717 PF05544 Proline racemase J164_02718 PF08448 PAS fold J164_02718 PF12833 Helix-turn-helix domain J164_02719 PF00448 SRP54-type protein, GTPase domain J164_02719 PF02881 SRP54-type protein, helical bundle domain J164_02720 PF00633 Helix-hairpin-helix motif J164_02720 PF00730 HhH-GPD superfamily base excision DNA repair protein J164_02720 PF14815 NUDIX domain J164_02721 PF04362 Bacterial Fe(2+) trafficking J164_02722 PF00072 Response regulator receiver domain J164_02722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02722 PF13426 PAS domain J164_02724 PF10685 J164_02724 J164_02728 PF08212 Lipocalin-like domain J164_02729 PF03168 Late embryogenesis abundant protein J164_02730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_02730 PF02770 Acyl-CoA dehydrogenase, middle domain J164_02730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_02730 PF12418 J164_02730 J164_02730 PF12806 J164_02730 J164_02731 PF14279 J164_02731 J164_02732 PF02779 Transketolase, pyrimidine binding domain J164_02732 PF02780 Transketolase, C-terminal domain J164_02732 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J164_02733 PF04101 Glycosyltransferase family 28 C-terminal domain J164_02735 PF13506 Glycosyl transferase family 21 J164_02736 PF01370 NAD dependent epimerase/dehydratase family J164_02737 PF00753 Metallo-beta-lactamase superfamily J164_02738 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J164_02738 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J164_02739 PF01963 J164_02739 J164_02740 PF06172 Cupin superfamily (DUF985) J164_02741 PF03808 J164_02741 J164_02742 PF04230 J164_02742 J164_02744 PF13440 J164_02744 J164_02745 PF13692 Glycosyl transferases group 1 J164_02746 PF00534 Glycosyl transferases group 1 J164_02746 PF13439 Glycosyltransferase Family 4 J164_02747 PF01757 J164_02747 J164_02748 PF01757 J164_02748 J164_02750 PF02397 J164_02750 J164_02750 PF13727 CoA-binding domain J164_02751 PF02706 Chain length determinant protein J164_02751 PF13807 J164_02751 J164_02752 PF02563 Polysaccharide biosynthesis/export protein J164_02752 PF10531 SLBB domain J164_02754 PF13411 MerR HTH family regulatory protein J164_02755 PF00216 Bacterial DNA-binding protein J164_02756 PF01588 Putative tRNA binding domain J164_02756 PF03147 Ferredoxin-fold anticodon binding domain J164_02756 PF03483 B3/4 domain J164_02756 PF03484 tRNA synthetase B5 domain J164_02757 PF01409 tRNA synthetases class II core domain (F) J164_02757 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J164_02758 PF00453 Ribosomal protein L20 J164_02759 PF01632 Ribosomal protein L35 J164_02761 PF00707 Translation initiation factor IF-3, C-terminal domain J164_02761 PF05198 Translation initiation factor IF-3, N-terminal domain J164_02762 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J164_02762 PF02824 TGS domain J164_02762 PF03129 Anticodon binding domain J164_02762 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J164_02763 PF00356 Bacterial regulatory proteins, lacI family J164_02763 PF13377 Periplasmic binding protein-like domain J164_02764 PF00128 Alpha amylase, catalytic domain J164_02765 PF07690 Major Facilitator Superfamily J164_02766 PF06202 Amylo-alpha-1,6-glucosidase J164_02767 PF10566 Glycoside hydrolase 97 J164_02767 PF14508 Glycosyl-hydrolase 97 N-terminal J164_02767 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J164_02769 PF07715 TonB-dependent Receptor Plug Domain J164_02769 PF14905 Outer membrane protein beta-barrel family J164_02771 PF00128 Alpha amylase, catalytic domain J164_02772 PF01527 Transposase J164_02773 PF13683 J164_02773 J164_02774 PF07007 Protein of unknown function (DUF1311) J164_02775 PF04610 J164_02775 J164_02777 PF00182 Chitinase class I J164_02777 PF01471 Putative peptidoglycan binding domain J164_02779 PF04610 J164_02779 J164_02781 PF03135 J164_02781 J164_02782 PF05101 J164_02782 J164_02783 PF04956 J164_02783 J164_02784 PF01464 Transglycosylase SLT domain J164_02785 PF00437 Type II/IV secretion system protein J164_02786 PF03743 Bacterial conjugation TrbI-like protein J164_02787 PF03524 Conjugal transfer protein J164_02788 PF04335 VirB8 protein J164_02789 PF10671 Toxin co-regulated pilus biosynthesis protein Q J164_02790 PF02534 Type IV secretory system Conjugative DNA transfer J164_02793 PF00271 Helicase conserved C-terminal domain J164_02793 PF02151 UvrB/uvrC motif J164_02793 PF04851 Type III restriction enzyme, res subunit J164_02793 PF12344 Ultra-violet resistance protein B J164_02801 PF01527 Transposase J164_02802 PF00665 Integrase core domain J164_02802 PF13276 J164_02802 J164_02805 PF07791 J164_02805 J164_02808 PF01555 DNA methylase J164_02809 PF04860 Phage portal protein J164_02810 PF03237 Terminase-like family J164_02810 PF06056 Putative ATPase subunit of terminase (gpP-like) J164_02810 PF17289 J164_02810 J164_02811 PF05929 J164_02811 J164_02812 PF05125 J164_02812 J164_02813 PF05944 J164_02813 J164_02814 PF05926 J164_02814 J164_02815 PF05489 Phage Tail Protein X J164_02816 PF16931 J164_02816 J164_02817 PF05449 J164_02817 J164_02820 PF06891 J164_02820 J164_02821 PF05069 J164_02821 J164_02822 PF04865 J164_02822 J164_02823 PF09684 J164_02823 J164_02827 PF04717 Phage-related baseplate assembly protein J164_02828 PF00665 Integrase core domain J164_02828 PF13276 J164_02828 J164_02829 PF01527 Transposase J164_02830 PF07963 Prokaryotic N-terminal methylation motif J164_02830 PF16732 J164_02830 J164_02831 PF05567 Neisseria PilC beta-propeller domain J164_02832 PF07963 Prokaryotic N-terminal methylation motif J164_02832 PF16074 J164_02832 J164_02833 PF07963 Prokaryotic N-terminal methylation motif J164_02833 PF12019 Type II transport protein GspH J164_02834 PF06580 J164_02834 J164_02835 PF03641 Possible lysine decarboxylase J164_02835 PF11892 Domain of unknown function (DUF3412) J164_02835 PF14793 Domain of unknown function (DUF4478) J164_02836 PF07715 TonB-dependent Receptor Plug Domain J164_02836 PF13620 Carboxypeptidase regulatory-like domain J164_02837 PF01914 J164_02837 J164_02838 PF00106 short chain dehydrogenase J164_02839 PF00462 Glutaredoxin J164_02840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J164_02840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J164_02841 PF02222 ATP-grasp domain J164_02842 PF00731 AIR carboxylase J164_02843 PF03966 Trm112p-like protein J164_02844 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J164_02844 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J164_02845 PF10030 J164_02845 J164_02846 PF00013 KH domain J164_02846 PF00575 S1 RNA binding domain J164_02846 PF01138 3' exoribonuclease family, domain 1 J164_02846 PF03725 3' exoribonuclease family, domain 2 J164_02846 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J164_02847 PF00312 Ribosomal protein S15 J164_02848 PF01509 TruB family pseudouridylate synthase (N terminal domain) J164_02848 PF09157 Pseudouridine synthase II TruB, C-terminal J164_02848 PF16198 J164_02848 J164_02849 PF02033 Ribosome-binding factor A J164_02850 PF00009 Elongation factor Tu GTP binding domain J164_02850 PF04760 Translation initiation factor IF-2, N-terminal region J164_02850 PF08364 J164_02850 J164_02850 PF11987 Translation-initiation factor 2 J164_02851 PF00575 S1 RNA binding domain J164_02851 PF08529 NusA N-terminal domain J164_02851 PF13184 NusA-like KH domain J164_02851 PF14520 Helix-hairpin-helix domain J164_02852 PF02576 Uncharacterised BCR, YhbC family COG0779 J164_02852 PF17384 J164_02852 J164_02854 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_02855 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_02856 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J164_02856 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J164_02857 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J164_02858 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J164_02859 PF12838 4Fe-4S dicluster domain J164_02860 PF00146 NADH dehydrogenase J164_02861 PF00384 Molybdopterin oxidoreductase J164_02861 PF01568 Molydopterin dinucleotide binding domain J164_02861 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J164_02861 PF13510 2Fe-2S iron-sulfur cluster binding domain J164_02862 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J164_02862 PF10531 SLBB domain J164_02862 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J164_02863 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin J164_02864 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J164_02865 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J164_02866 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J164_02867 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J164_02869 PF03840 Preprotein translocase SecG subunit J164_02870 PF00121 Triosephosphate isomerase J164_02871 PF00106 short chain dehydrogenase J164_02872 PF01152 Bacterial-like globin J164_02873 PF11231 J164_02873 J164_02874 PF00563 EAL domain J164_02874 PF00672 HAMP domain J164_02874 PF00990 GGDEF domain J164_02874 PF14827 Sensory domain of two-component sensor kinase J164_02876 PF03171 2OG-Fe(II) oxygenase superfamily J164_02876 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J164_02877 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J164_02877 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J164_02877 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J164_02877 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J164_02878 PF01039 Carboxyl transferase domain J164_02879 PF00290 Tryptophan synthase alpha chain J164_02881 PF00291 Pyridoxal-phosphate dependent enzyme J164_02882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_02882 PF03466 LysR substrate binding domain J164_02883 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J164_02884 PF01416 tRNA pseudouridine synthase J164_02886 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_02888 PF01118 Semialdehyde dehydrogenase, NAD binding domain J164_02888 PF02774 Semialdehyde dehydrogenase, dimerisation domain J164_02889 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J164_02889 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J164_02890 PF01264 Chorismate synthase J164_02891 PF05175 Methyltransferase small domain J164_02892 PF02630 SCO1/SenC J164_02893 PF02666 J164_02893 J164_02894 PF01464 Transglycosylase SLT domain J164_02894 PF01476 LysM domain J164_02895 PF05872 J164_02895 J164_02896 PF00293 NUDIX domain J164_02898 PF01694 Rhomboid family J164_02899 PF01272 Transcription elongation factor, GreA/GreB, C-term J164_02899 PF03449 Transcription elongation factor, N-terminal J164_02900 PF00919 Uncharacterized protein family UPF0004 J164_02900 PF04055 Radical SAM superfamily J164_02901 PF01738 Dienelactone hydrolase family J164_02902 PF01230 HIT domain J164_02905 PF00692 dUTPase J164_02906 PF10609 ParA/MinD ATPase like J164_02907 PF00593 TonB dependent receptor J164_02907 PF07715 TonB-dependent Receptor Plug Domain J164_02908 PF00593 TonB dependent receptor J164_02908 PF07715 TonB-dependent Receptor Plug Domain J164_02909 PF01593 Flavin containing amine oxidoreductase J164_02910 PF01431 Peptidase family M13 J164_02910 PF05649 Peptidase family M13 J164_02911 PF01431 Peptidase family M13 J164_02911 PF05649 Peptidase family M13 J164_02912 PF01431 Peptidase family M13 J164_02912 PF05649 Peptidase family M13 J164_02913 PF01694 Rhomboid family J164_02914 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J164_02915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J164_02915 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_02916 PF01266 FAD dependent oxidoreductase J164_02917 PF04235 J164_02917 J164_02918 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J164_02919 PF00877 NlpC/P60 family J164_02920 PF00877 NlpC/P60 family J164_02921 PF03061 Thioesterase superfamily J164_02922 PF13649 Methyltransferase domain J164_02923 PF00375 Sodium:dicarboxylate symporter family J164_02924 PF00245 Alkaline phosphatase J164_02925 PF01171 PP-loop family J164_02925 PF09179 TilS substrate binding domain J164_02925 PF11734 TilS substrate C-terminal domain J164_02926 PF02609 Exonuclease VII small subunit J164_02927 PF00348 Polyprenyl synthetase J164_02928 PF14521 Lysine-specific metallo-endopeptidase J164_02929 PF09685 J164_02929 J164_02930 PF01523 Putative modulator of DNA gyrase J164_02931 PF04751 Protein of unknown function (DUF615) J164_02932 PF01523 Putative modulator of DNA gyrase J164_02934 PF13116 J164_02934 J164_02934 PF13502 J164_02934 J164_02935 PF10150 Ribonuclease E/G family J164_02936 PF02545 Maf-like protein J164_02937 PF04402 Protein of unknown function (DUF541) J164_02938 PF00593 TonB dependent receptor J164_02938 PF07715 TonB-dependent Receptor Plug Domain J164_02938 PF13620 Carboxypeptidase regulatory-like domain J164_02939 PF03544 Gram-negative bacterial TonB protein C-terminal J164_02940 PF02590 Predicted SPOUT methyltransferase J164_02941 PF05787 Bacterial protein of unknown function (DUF839) J164_02941 PF10518 TAT (twin-arginine translocation) pathway signal sequence J164_02942 PF02410 Oligomerisation domain J164_02943 PF01467 Cytidylyltransferase J164_02944 PF06144 DNA polymerase III, delta subunit J164_02945 PF04390 Lipopolysaccharide-assembly J164_02946 PF00133 tRNA synthetases class I (I, L, M and V) J164_02946 PF08264 Anticodon-binding domain of tRNA J164_02946 PF13603 Leucyl-tRNA synthetase, Domain 2 J164_02947 PF06197 J164_02947 J164_02948 PF00085 Thioredoxin J164_02948 PF14559 Tetratricopeptide repeat J164_02948 PF14561 Tetratricopeptide repeat J164_02949 PF14539 Domain of unknown function (DUF4442) J164_02953 PF04070 J164_02953 J164_02954 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J164_02955 PF00892 EamA-like transporter family J164_02956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_02956 PF03466 LysR substrate binding domain J164_02958 PF14257 J164_02958 J164_02960 PF05960 Bacterial protein of unknown function (DUF885) J164_02961 PF00005 ABC transporter J164_02961 PF00664 ABC transporter transmembrane region J164_02962 PF07929 Plasmid pRiA4b ORF-3-like protein J164_02964 PF00873 AcrB/AcrD/AcrF family J164_02965 PF16576 J164_02965 J164_02966 PF06629 J164_02966 J164_02967 PF02321 Outer membrane efflux protein J164_02968 PF00072 Response regulator receiver domain J164_02968 PF00486 Transcriptional regulatory protein, C terminal J164_02969 PF00512 His Kinase A (phospho-acceptor) domain J164_02969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_02970 PF00999 Sodium/hydrogen exchanger family J164_02971 PF00144 Beta-lactamase J164_02971 PF11954 J164_02971 J164_02972 PF03737 Demethylmenaquinone methyltransferase J164_02973 PF01904 Protein of unknown function DUF72 J164_02974 PF00892 EamA-like transporter family J164_02975 PF00990 GGDEF domain J164_02975 PF01590 GAF domain J164_02976 PF00849 RNA pseudouridylate synthase J164_02976 PF01479 S4 domain J164_02977 PF00563 EAL domain J164_02977 PF00990 GGDEF domain J164_02977 PF08447 PAS fold J164_02978 PF00270 DEAD/DEAH box helicase J164_02978 PF00271 Helicase conserved C-terminal domain J164_02978 PF03880 DbpA RNA binding domain J164_02979 PF04542 Sigma-70 region 2 J164_02979 PF08281 Sigma-70, region 4 J164_02981 PF13275 S4 domain J164_02983 PF01124 MAPEG family J164_02984 PF13211 J164_02984 J164_02987 PF00730 HhH-GPD superfamily base excision DNA repair protein J164_02987 PF02805 Metal binding domain of Ada J164_02987 PF06029 AlkA N-terminal domain J164_02987 PF12833 Helix-turn-helix domain J164_02988 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J164_02988 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J164_02989 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase J164_02990 PF00654 Voltage gated chloride channel J164_02991 PF00107 Zinc-binding dehydrogenase J164_02991 PF08240 Alcohol dehydrogenase GroES-like domain J164_02992 PF17067 J164_02992 J164_02993 PF03203 J164_02993 J164_02994 PF00593 TonB dependent receptor J164_02994 PF07715 TonB-dependent Receptor Plug Domain J164_02995 PF00593 TonB dependent receptor J164_02995 PF07715 TonB-dependent Receptor Plug Domain J164_02996 PF00082 Subtilase family J164_02996 PF01483 Proprotein convertase P-domain J164_02999 PF00082 Subtilase family J164_02999 PF01483 Proprotein convertase P-domain J164_03001 PF00248 Aldo/keto reductase family J164_03002 PF07690 Major Facilitator Superfamily J164_03003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03003 PF03466 LysR substrate binding domain J164_03005 PF06719 J164_03005 J164_03005 PF12833 Helix-turn-helix domain J164_03006 PF07883 Cupin domain J164_03007 PF00440 Bacterial regulatory proteins, tetR family J164_03008 PF02321 Outer membrane efflux protein J164_03009 PF00873 AcrB/AcrD/AcrF family J164_03010 PF00529 HlyD family secretion protein J164_03010 PF16576 J164_03010 J164_03011 PF00440 Bacterial regulatory proteins, tetR family J164_03011 PF14246 AefR-like transcriptional repressor, C-terminal region J164_03012 PF01475 Ferric uptake regulator family J164_03013 PF00749 tRNA synthetases class I (E and Q), catalytic domain J164_03014 PF12275 J164_03014 J164_03015 PF00795 Carbon-nitrogen hydrolase J164_03018 PF06123 J164_03018 J164_03019 PF00112 Papain family cysteine protease J164_03020 PF00512 His Kinase A (phospho-acceptor) domain J164_03020 PF00672 HAMP domain J164_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03021 PF00072 Response regulator receiver domain J164_03021 PF00486 Transcriptional regulatory protein, C terminal J164_03022 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ J164_03023 PF13302 Acetyltransferase (GNAT) domain J164_03024 PF00270 DEAD/DEAH box helicase J164_03024 PF00271 Helicase conserved C-terminal domain J164_03024 PF02559 CarD-like/TRCF domain J164_03024 PF03461 TRCF domain J164_03027 PF14412 J164_03027 J164_03028 PF07791 J164_03028 J164_03029 PF08845 J164_03029 J164_03030 PF13466 STAS domain J164_03031 PF01584 CheW-like domain J164_03031 PF01627 Hpt domain J164_03031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03031 PF02895 Signal transducing histidine kinase, homodimeric domain J164_03032 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03033 PF01584 CheW-like domain J164_03034 PF00072 Response regulator receiver domain J164_03034 PF00563 EAL domain J164_03035 PF01739 CheR methyltransferase, SAM binding domain J164_03035 PF03705 CheR methyltransferase, all-alpha domain J164_03036 PF00072 Response regulator receiver domain J164_03036 PF01339 CheB methylesterase J164_03037 PF13091 PLD-like domain J164_03038 PF01431 Peptidase family M13 J164_03038 PF05649 Peptidase family M13 J164_03040 PF00300 Histidine phosphatase superfamily (branch 1) J164_03041 PF04493 Endonuclease V J164_03043 PF02678 Pirin J164_03043 PF05726 Pirin C-terminal cupin domain J164_03045 PF02566 OsmC-like protein J164_03046 PF02678 Pirin J164_03046 PF05726 Pirin C-terminal cupin domain J164_03047 PF02554 J164_03047 J164_03047 PF13722 J164_03047 J164_03048 PF04328 J164_03048 J164_03049 PF13419 Haloacid dehalogenase-like hydrolase J164_03050 PF12796 Ankyrin repeats (3 copies) J164_03051 PF11187 Protein of unknown function (DUF2974) J164_03052 PF05684 J164_03052 J164_03055 PF12804 MobA-like NTP transferase domain J164_03056 PF00665 Integrase core domain J164_03057 PF01527 Transposase J164_03058 PF13478 XdhC Rossmann domain J164_03059 PF02625 XdhC and CoxI family J164_03060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J164_03060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J164_03061 PF00941 FAD binding domain in molybdopterin dehydrogenase J164_03061 PF03450 CO dehydrogenase flavoprotein C-terminal domain J164_03062 PF00111 2Fe-2S iron-sulfur cluster binding domain J164_03062 PF01799 [2Fe-2S] binding domain J164_03063 PF00107 Zinc-binding dehydrogenase J164_03063 PF08240 Alcohol dehydrogenase GroES-like domain J164_03064 PF00990 GGDEF domain J164_03064 PF02743 Cache domain J164_03065 PF00436 Single-strand binding protein family J164_03066 PF00348 Polyprenyl synthetase J164_03067 PF01738 Dienelactone hydrolase family J164_03068 PF02875 Mur ligase family, glutamate ligase domain J164_03068 PF08245 Mur ligase middle domain J164_03071 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J164_03071 PF00696 Amino acid kinase family J164_03071 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J164_03072 PF02567 Phenazine biosynthesis-like protein J164_03073 PF02567 Phenazine biosynthesis-like protein J164_03074 PF05433 J164_03074 J164_03075 PF02566 OsmC-like protein J164_03076 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J164_03076 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J164_03077 PF03652 Uncharacterised protein family (UPF0081) J164_03078 PF02622 Uncharacterized ACR, COG1678 J164_03079 PF03352 Methyladenine glycosylase J164_03080 PF01904 Protein of unknown function DUF72 J164_03082 PF03211 Pectate lyase J164_03083 PF00437 Type II/IV secretion system protein J164_03084 PF00437 Type II/IV secretion system protein J164_03085 PF01168 Alanine racemase, N-terminal domain J164_03086 PF03807 NADP oxidoreductase coenzyme F420-dependent J164_03086 PF14748 Pyrroline-5-carboxylate reductase dimerisation J164_03087 PF00216 Bacterial DNA-binding protein J164_03088 PF01551 Peptidase family M23 J164_03089 PF12977 Domain of Unknown Function with PDB structure (DUF3861) J164_03091 PF07273 Protein of unknown function (DUF1439) J164_03092 PF01965 DJ-1/PfpI family J164_03093 PF00856 SET domain J164_03094 PF02082 Transcriptional regulator J164_03095 PF01458 Uncharacterized protein family (UPF0051) J164_03096 PF00005 ABC transporter J164_03097 PF01458 Uncharacterized protein family (UPF0051) J164_03098 PF00266 Aminotransferase class-V J164_03099 PF13673 Acetyltransferase (GNAT) domain J164_03100 PF00355 Rieske [2Fe-2S] domain J164_03101 PF00593 TonB dependent receptor J164_03101 PF07715 TonB-dependent Receptor Plug Domain J164_03102 PF13640 2OG-Fe(II) oxygenase superfamily J164_03103 PF08238 Sel1 repeat J164_03104 PF16357 J164_03104 J164_03105 PF10029 J164_03105 J164_03106 PF10670 J164_03106 J164_03107 PF02424 ApbE family J164_03108 PF00175 Oxidoreductase NAD-binding domain J164_03108 PF00258 Flavodoxin J164_03109 PF13202 EF hand J164_03109 PF13499 EF-hand domain pair J164_03110 PF05962 HutD J164_03111 PF12836 Helix-hairpin-helix motif J164_03112 PF01546 Peptidase family M20/M25/M40 J164_03112 PF07687 Peptidase dimerisation domain J164_03113 PF04226 J164_03113 J164_03114 PF01636 Phosphotransferase enzyme family J164_03115 PF00483 Nucleotidyl transferase J164_03116 PF00308 Bacterial dnaA protein J164_03117 PF01594 J164_03117 J164_03118 PF09839 J164_03118 J164_03119 PF00586 AIR synthase related protein, N-terminal domain J164_03119 PF02769 AIR synthase related protein, C-terminal domain J164_03121 PF00551 Formyl transferase J164_03122 PF11306 Protein of unknown function (DUF3108) J164_03123 PF11306 Protein of unknown function (DUF3108) J164_03125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J164_03126 PF01722 BolA-like protein J164_03127 PF00571 CBS domain J164_03127 PF01380 SIS domain J164_03128 PF08282 haloacid dehalogenase-like hydrolase J164_03129 PF06835 Lipopolysaccharide-assembly, LptC-related J164_03130 PF03968 OstA-like protein J164_03131 PF00005 ABC transporter J164_03131 PF12399 Branched-chain amino acid ATP-binding cassette transporter J164_03132 PF00309 J164_03132 J164_03132 PF04552 Sigma-54, DNA binding domain J164_03132 PF04963 Sigma-54 factor, core binding domain J164_03133 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J164_03134 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J164_03135 PF02603 HPr Serine kinase N terminus J164_03135 PF07475 HPr Serine kinase C-terminal domain J164_03136 PF03668 J164_03136 J164_03137 PF03610 PTS system fructose IIA component J164_03138 PF00381 PTS HPr component phosphorylation site J164_03139 PF00391 PEP-utilising enzyme, mobile domain J164_03139 PF02896 PEP-utilising enzyme, TIM barrel domain J164_03139 PF05524 PEP-utilising enzyme, N-terminal J164_03140 PF00571 CBS domain J164_03140 PF01769 Divalent cation transporter J164_03140 PF03448 MgtE intracellular N domain J164_03141 PF00326 Prolyl oligopeptidase family J164_03142 PF02322 J164_03142 J164_03143 PF01654 J164_03143 J164_03144 PF01244 Membrane dipeptidase (Peptidase family M19) J164_03145 PF00324 Amino acid permease J164_03146 PF00544 Pectate lyase J164_03147 PF00561 alpha/beta hydrolase fold J164_03148 PF00196 Bacterial regulatory proteins, luxR family J164_03148 PF03472 Autoinducer binding domain J164_03149 PF13520 Amino acid permease J164_03150 PF01764 Lipase (class 3) J164_03152 PF13365 Trypsin-like peptidase domain J164_03154 PF12706 Beta-lactamase superfamily domain J164_03155 PF04820 Tryptophan halogenase J164_03156 PF13621 Cupin-like domain J164_03157 PF07277 J164_03157 J164_03158 PF00593 TonB dependent receptor J164_03158 PF07715 TonB-dependent Receptor Plug Domain J164_03159 PF01433 Peptidase family M1 J164_03160 PF00376 MerR family regulatory protein J164_03160 PF09278 MerR, DNA binding J164_03161 PF07690 Major Facilitator Superfamily J164_03163 PF03738 Glutathionylspermidine synthase preATP-grasp J164_03164 PF06693 J164_03164 J164_03165 PF03994 J164_03165 J164_03166 PF10679 J164_03166 J164_03167 PF07885 Ion channel J164_03168 PF04012 J164_03168 J164_03169 PF09938 J164_03169 J164_03170 PF01243 Pyridoxamine 5'-phosphate oxidase J164_03170 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J164_03171 PF01202 Shikimate kinase J164_03172 PF01761 3-dehydroquinate synthase J164_03174 PF01208 Uroporphyrinogen decarboxylase (URO-D) J164_03175 PF11747 J164_03175 J164_03176 PF11747 J164_03176 J164_03177 PF11747 J164_03177 J164_03178 PF11747 J164_03178 J164_03180 PF11747 J164_03180 J164_03184 PF08924 Domain of unknown function (DUF1906) J164_03187 PF12833 Helix-turn-helix domain J164_03187 PF14532 Sigma-54 interaction domain J164_03188 PF07690 Major Facilitator Superfamily J164_03189 PF00072 Response regulator receiver domain J164_03189 PF00512 His Kinase A (phospho-acceptor) domain J164_03189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03189 PF07494 Two component regulator propeller J164_03189 PF07495 Y_Y_Y domain J164_03190 PF00072 Response regulator receiver domain J164_03190 PF00512 His Kinase A (phospho-acceptor) domain J164_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03190 PF07494 Two component regulator propeller J164_03190 PF07495 Y_Y_Y domain J164_03192 PF00072 Response regulator receiver domain J164_03192 PF00512 His Kinase A (phospho-acceptor) domain J164_03192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03192 PF07494 Two component regulator propeller J164_03192 PF07495 Y_Y_Y domain J164_03193 PF04264 YceI-like domain J164_03194 PF01292 Prokaryotic cytochrome b561 J164_03195 PF04264 YceI-like domain J164_03196 PF05768 Glutaredoxin-like domain (DUF836) J164_03197 PF03313 J164_03197 J164_03197 PF03315 Serine dehydratase beta chain J164_03198 PF00561 alpha/beta hydrolase fold J164_03199 PF00742 Homoserine dehydrogenase J164_03199 PF03447 Homoserine dehydrogenase, NAD binding domain J164_03200 PF01053 Cys/Met metabolism PLP-dependent enzyme J164_03201 PF00561 alpha/beta hydrolase fold J164_03203 PF01551 Peptidase family M23 J164_03204 PF00009 Elongation factor Tu GTP binding domain J164_03204 PF16658 J164_03204 J164_03205 PF03006 J164_03205 J164_03206 PF05170 J164_03206 J164_03207 PF00571 CBS domain J164_03208 PF00535 Glycosyl transferase family 2 J164_03209 PF00912 Transglycosylase J164_03210 PF01430 Hsp33 protein J164_03212 PF00593 TonB dependent receptor J164_03212 PF07715 TonB-dependent Receptor Plug Domain J164_03213 PF13181 Tetratricopeptide repeat J164_03213 PF13469 Sulfotransferase family J164_03214 PF00440 Bacterial regulatory proteins, tetR family J164_03215 PF12146 Putative lysophospholipase J164_03216 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J164_03216 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J164_03216 PF09317 J164_03216 J164_03217 PF06993 J164_03217 J164_03218 PF07690 Major Facilitator Superfamily J164_03219 PF00144 Beta-lactamase J164_03221 PF01597 Glycine cleavage H-protein J164_03222 PF01571 Aminomethyltransferase folate-binding domain J164_03222 PF08669 Glycine cleavage T-protein C-terminal barrel domain J164_03223 PF01957 NfeD-like C-terminal, partner-binding J164_03224 PF16200 J164_03224 J164_03225 PF02694 J164_03225 J164_03226 PF03819 MazG nucleotide pyrophosphohydrolase domain J164_03227 PF00459 Inositol monophosphatase family J164_03228 PF00293 NUDIX domain J164_03229 PF00202 Aminotransferase class-III J164_03230 PF04452 RNA methyltransferase J164_03231 PF02685 Glucokinase J164_03232 PF00593 TonB dependent receptor J164_03232 PF07715 TonB-dependent Receptor Plug Domain J164_03233 PF01120 Alpha-L-fucosidase J164_03233 PF16757 J164_03233 J164_03234 PF00704 Glycosyl hydrolases family 18 J164_03235 PF00728 Glycosyl hydrolase family 20, catalytic domain J164_03235 PF02838 Glycosyl hydrolase family 20, domain 2 J164_03235 PF13290 J164_03235 J164_03236 PF00703 Glycosyl hydrolases family 2 J164_03237 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_03237 PF01915 Glycosyl hydrolase family 3 C-terminal domain J164_03237 PF07691 PA14 domain J164_03237 PF14310 Fibronectin type III-like domain J164_03238 PF00593 TonB dependent receptor J164_03238 PF07715 TonB-dependent Receptor Plug Domain J164_03238 PF13620 Carboxypeptidase regulatory-like domain J164_03239 PF01301 Glycosyl hydrolases family 35 J164_03240 PF13520 Amino acid permease J164_03241 PF00294 pfkB family carbohydrate kinase J164_03242 PF02056 Family 4 glycosyl hydrolase J164_03242 PF11975 Family 4 glycosyl hydrolase C-terminal domain J164_03243 PF06824 Protein of unknown function (DUF1237) J164_03244 PF07971 Glycosyl hydrolase family 92 J164_03245 PF01301 Glycosyl hydrolases family 35 J164_03248 PF11747 J164_03248 J164_03249 PF13088 BNR repeat-like domain J164_03250 PF13855 Leucine rich repeat J164_03251 PF03932 CutC family J164_03252 PF01112 Asparaginase J164_03253 PF13302 Acetyltransferase (GNAT) domain J164_03254 PF01584 CheW-like domain J164_03255 PF01339 CheB methylesterase J164_03256 PF00072 Response regulator receiver domain J164_03256 PF01584 CheW-like domain J164_03256 PF01627 Hpt domain J164_03256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03256 PF02895 Signal transducing histidine kinase, homodimeric domain J164_03257 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03258 PF01584 CheW-like domain J164_03259 PF00072 Response regulator receiver domain J164_03260 PF00072 Response regulator receiver domain J164_03261 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J164_03261 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J164_03262 PF03544 Gram-negative bacterial TonB protein C-terminal J164_03263 PF03747 ADP-ribosylglycohydrolase J164_03264 PF00814 Glycoprotease family J164_03265 PF13307 Helicase C-terminal domain J164_03267 PF00905 Penicillin binding protein transpeptidase domain J164_03267 PF00912 Transglycosylase J164_03267 PF14814 Bifunctional transglycosylase second domain J164_03268 PF00535 Glycosyl transferase family 2 J164_03268 PF13692 Glycosyl transferases group 1 J164_03270 PF02824 TGS domain J164_03270 PF04607 Region found in RelA / SpoT proteins J164_03270 PF13291 ACT domain J164_03270 PF13328 HD domain J164_03271 PF12706 Beta-lactamase superfamily domain J164_03272 PF03070 TENA/THI-4/PQQC family J164_03273 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J164_03274 PF04055 Radical SAM superfamily J164_03274 PF13186 Iron-sulfur cluster-binding domain J164_03274 PF13353 4Fe-4S single cluster domain J164_03276 PF10142 PhoPQ-activated pathogenicity-related protein J164_03277 PF02685 Glucokinase J164_03278 PF00593 TonB dependent receptor J164_03278 PF07715 TonB-dependent Receptor Plug Domain J164_03279 PF00270 DEAD/DEAH box helicase J164_03279 PF00271 Helicase conserved C-terminal domain J164_03279 PF04408 Helicase associated domain (HA2) J164_03279 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J164_03279 PF11898 J164_03279 J164_03280 PF00210 Ferritin-like domain J164_03281 PF00270 DEAD/DEAH box helicase J164_03281 PF00271 Helicase conserved C-terminal domain J164_03281 PF00570 HRDC domain J164_03281 PF09382 RQC domain J164_03281 PF16124 J164_03281 J164_03283 PF00072 Response regulator receiver domain J164_03286 PF01479 S4 domain J164_03288 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03288 PF00672 HAMP domain J164_03288 PF12729 J164_03288 J164_03289 PF01810 J164_03289 J164_03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03290 PF03466 LysR substrate binding domain J164_03291 PF00072 Response regulator receiver domain J164_03292 PF07536 J164_03292 J164_03292 PF08448 PAS fold J164_03293 PF06508 Queuosine biosynthesis protein QueC J164_03295 PF04055 Radical SAM superfamily J164_03295 PF13394 4Fe-4S single cluster domain J164_03296 PF13525 Outer membrane lipoprotein J164_03296 PF16331 J164_03296 J164_03297 PF00691 OmpA family J164_03298 PF04052 TolB amino-terminal domain J164_03298 PF07676 WD40-like Beta Propeller Repeat J164_03299 PF13103 TonB C terminal J164_03300 PF02472 Biopolymer transport protein ExbD/TolR J164_03301 PF01618 J164_03301 J164_03302 PF03061 Thioesterase superfamily J164_03303 PF05491 Holliday junction DNA helicase ruvB C-terminus J164_03303 PF05496 Holliday junction DNA helicase ruvB N-terminus J164_03305 PF02705 J164_03305 J164_03306 PF01330 RuvA N terminal domain J164_03306 PF07499 RuvA, C-terminal domain J164_03306 PF14520 Helix-hairpin-helix domain J164_03307 PF02075 Crossover junction endodeoxyribonuclease RuvC J164_03308 PF01709 Transcriptional regulator J164_03310 PF00583 Acetyltransferase (GNAT) family J164_03311 PF00152 tRNA synthetases class II (D, K and N) J164_03311 PF01336 OB-fold nucleic acid binding domain J164_03311 PF02938 GAD domain J164_03312 PF11218 J164_03312 J164_03313 PF09723 J164_03313 J164_03314 PF07690 Major Facilitator Superfamily J164_03315 PF00593 TonB dependent receptor J164_03315 PF07715 TonB-dependent Receptor Plug Domain J164_03317 PF04185 Phosphoesterase family J164_03317 PF05506 J164_03317 J164_03319 PF13354 Beta-lactamase enzyme family J164_03320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03320 PF03466 LysR substrate binding domain J164_03321 PF14317 J164_03321 J164_03322 PF00005 ABC transporter J164_03322 PF12848 ABC transporter J164_03322 PF16326 J164_03322 J164_03323 PF00593 TonB dependent receptor J164_03323 PF07715 TonB-dependent Receptor Plug Domain J164_03324 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_03325 PF00593 TonB dependent receptor J164_03325 PF07715 TonB-dependent Receptor Plug Domain J164_03326 PF00593 TonB dependent receptor J164_03326 PF07715 TonB-dependent Receptor Plug Domain J164_03327 PF00067 Cytochrome P450 J164_03328 PF00999 Sodium/hydrogen exchanger family J164_03328 PF02254 TrkA-N domain J164_03332 PF03328 HpcH/HpaI aldolase/citrate lyase family J164_03333 PF00593 TonB dependent receptor J164_03333 PF07715 TonB-dependent Receptor Plug Domain J164_03334 PF02655 ATP-grasp domain J164_03335 PF04183 IucA / IucC family J164_03335 PF06276 Ferric iron reductase FhuF-like transporter J164_03336 PF07690 Major Facilitator Superfamily J164_03337 PF04183 IucA / IucC family J164_03337 PF06276 Ferric iron reductase FhuF-like transporter J164_03338 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J164_03338 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J164_03341 PF02654 J164_03341 J164_03342 PF00300 Histidine phosphatase superfamily (branch 1) J164_03343 PF02277 Phosphoribosyltransferase J164_03344 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J164_03345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J164_03345 PF07685 CobB/CobQ-like glutamine amidotransferase domain J164_03346 PF00155 Aminotransferase class I and II J164_03347 PF03186 J164_03347 J164_03348 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J164_03348 PF12557 Cob(I)alamin adenosyltransferase N terminal J164_03351 PF00593 TonB dependent receptor J164_03351 PF07715 TonB-dependent Receptor Plug Domain J164_03353 PF00004 ATPase family associated with various cellular activities (AAA) J164_03353 PF02861 Clp amino terminal domain J164_03353 PF07724 AAA domain (Cdc48 subfamily) J164_03353 PF10431 C-terminal, D2-small domain, of ClpB protein J164_03354 PF00005 ABC transporter J164_03355 PF00528 Binding-protein-dependent transport system inner membrane component J164_03356 PF09084 NMT1/THI5 like J164_03357 PF00248 Aldo/keto reductase family J164_03358 PF00296 Luciferase-like monooxygenase J164_03359 PF00593 TonB dependent receptor J164_03359 PF07715 TonB-dependent Receptor Plug Domain J164_03360 PF01541 GIY-YIG catalytic domain J164_03361 PF14497 Glutathione S-transferase, C-terminal domain J164_03362 PF11219 J164_03362 J164_03363 PF07007 Protein of unknown function (DUF1311) J164_03366 PF12098 J164_03366 J164_03367 PF00593 TonB dependent receptor J164_03367 PF07715 TonB-dependent Receptor Plug Domain J164_03368 PF02358 Trehalose-phosphatase J164_03369 PF00723 Glycosyl hydrolases family 15 J164_03370 PF00982 Glycosyltransferase family 20 J164_03371 PF01011 PQQ enzyme repeat J164_03371 PF13360 PQQ-like domain J164_03372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03373 PF04134 J164_03373 J164_03374 PF13761 J164_03374 J164_03375 PF02578 Multi-copper polyphenol oxidoreductase laccase J164_03376 PF00849 RNA pseudouridylate synthase J164_03377 PF13525 Outer membrane lipoprotein J164_03379 PF00795 Carbon-nitrogen hydrolase J164_03379 PF02540 NAD synthase J164_03380 PF04480 Protein of unknown function (DUF559) J164_03381 PF01527 Transposase J164_03382 PF00665 Integrase core domain J164_03382 PF13276 J164_03382 J164_03385 PF01471 Putative peptidoglycan binding domain J164_03385 PF13406 Transglycosylase SLT domain J164_03386 PF01526 J164_03386 J164_03386 PF13700 J164_03386 J164_03387 PF00589 Phage integrase family J164_03389 PF11740 J164_03389 J164_03390 PF01129 NAD:arginine ADP-ribosyltransferase J164_03393 PF12760 Transposase zinc-ribbon domain J164_03393 PF12762 J164_03393 J164_03395 PF00549 CoA-ligase J164_03395 PF02629 CoA binding domain J164_03396 PF00549 CoA-ligase J164_03396 PF08442 ATP-grasp domain J164_03397 PF00512 His Kinase A (phospho-acceptor) domain J164_03397 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03398 PF00072 Response regulator receiver domain J164_03398 PF00158 Sigma-54 interaction domain J164_03398 PF02954 Bacterial regulatory protein, Fis family J164_03402 PF00437 Type II/IV secretion system protein J164_03402 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J164_03403 PF00114 Pilin (bacterial filament) J164_03403 PF07963 Prokaryotic N-terminal methylation motif J164_03404 PF00114 Pilin (bacterial filament) J164_03404 PF07963 Prokaryotic N-terminal methylation motif J164_03405 PF00482 Type II secretion system (T2SS), protein F J164_03406 PF01478 Type IV leader peptidase family J164_03406 PF06750 J164_03406 J164_03407 PF01121 Dephospho-CoA kinase J164_03409 PF05593 J164_03409 J164_03410 PF08845 J164_03410 J164_03411 PF01527 Transposase J164_03412 PF00665 Integrase core domain J164_03412 PF13276 J164_03412 J164_03413 PF00512 His Kinase A (phospho-acceptor) domain J164_03413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03414 PF00072 Response regulator receiver domain J164_03414 PF00486 Transcriptional regulatory protein, C terminal J164_03416 PF08443 RimK-like ATP-grasp domain J164_03417 PF00128 Alpha amylase, catalytic domain J164_03417 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J164_03418 PF00816 H-NS histone family J164_03420 PF00565 Staphylococcal nuclease homologue J164_03422 PF03389 MobA/MobL family J164_03423 PF06412 J164_03423 J164_03427 PF14412 J164_03427 J164_03428 PF07791 J164_03428 J164_03430 PF04002 RadC-like JAB domain J164_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03435 PF08448 PAS fold J164_03436 PF00072 Response regulator receiver domain J164_03438 PF01520 N-acetylmuramoyl-L-alanine amidase J164_03442 PF01527 Transposase J164_03443 PF00665 Integrase core domain J164_03445 PF16162 J164_03445 J164_03447 PF13560 Helix-turn-helix domain J164_03451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03451 PF08448 PAS fold J164_03452 PF02517 CAAX protease self-immunity J164_03455 PF13676 TIR domain J164_03457 PF00589 Phage integrase family J164_03459 PF00657 GDSL-like Lipase/Acylhydrolase J164_03459 PF03797 Autotransporter beta-domain J164_03460 PF02597 ThiS family J164_03461 PF05690 Thiazole biosynthesis protein ThiG J164_03462 PF02390 Putative methyltransferase J164_03463 PF02080 TrkA-C domain J164_03463 PF03600 Citrate transporter J164_03464 PF00355 Rieske [2Fe-2S] domain J164_03466 PF01557 Fumarylacetoacetate (FAA) hydrolase family J164_03467 PF01741 Large-conductance mechanosensitive channel, MscL J164_03468 PF04389 Peptidase family M28 J164_03469 PF00356 Bacterial regulatory proteins, lacI family J164_03469 PF13377 Periplasmic binding protein-like domain J164_03470 PF00593 TonB dependent receptor J164_03470 PF07715 TonB-dependent Receptor Plug Domain J164_03471 PF00703 Glycosyl hydrolases family 2 J164_03471 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J164_03471 PF02837 Glycosyl hydrolases family 2, sugar binding domain J164_03471 PF13385 Concanavalin A-like lectin/glucanases superfamily J164_03472 PF10566 Glycoside hydrolase 97 J164_03472 PF14508 Glycosyl-hydrolase 97 N-terminal J164_03472 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J164_03473 PF03080 J164_03473 J164_03474 PF00135 Carboxylesterase family J164_03475 PF00588 SpoU rRNA Methylase family J164_03475 PF08032 RNA 2'-O ribose methyltransferase substrate binding J164_03476 PF13302 Acetyltransferase (GNAT) domain J164_03477 PF01433 Peptidase family M1 J164_03477 PF11838 ERAP1-like C-terminal domain J164_03478 PF07791 J164_03478 J164_03479 PF00665 Integrase core domain J164_03479 PF13276 J164_03479 J164_03480 PF01527 Transposase J164_03481 PF07791 J164_03481 J164_03482 PF14412 J164_03482 J164_03486 PF00873 AcrB/AcrD/AcrF family J164_03487 PF16576 J164_03487 J164_03488 PF00009 Elongation factor Tu GTP binding domain J164_03488 PF01583 Adenylylsulphate kinase J164_03489 PF01507 Phosphoadenosine phosphosulfate reductase family J164_03490 PF00175 Oxidoreductase NAD-binding domain J164_03490 PF00258 Flavodoxin J164_03490 PF00667 FAD binding domain J164_03491 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J164_03491 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J164_03492 PF01507 Phosphoadenosine phosphosulfate reductase family J164_03493 PF03929 J164_03493 J164_03494 PF00593 TonB dependent receptor J164_03494 PF07715 TonB-dependent Receptor Plug Domain J164_03496 PF01590 GAF domain J164_03496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03498 PF03466 LysR substrate binding domain J164_03499 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J164_03499 PF13241 Putative NAD(P)-binding J164_03500 PF00291 Pyridoxal-phosphate dependent enzyme J164_03501 PF04191 Phospholipid methyltransferase J164_03502 PF01661 Macro domain J164_03503 PF00274 Fructose-bisphosphate aldolase class-I J164_03504 PF00224 Pyruvate kinase, barrel domain J164_03504 PF02887 Pyruvate kinase, alpha/beta domain J164_03505 PF13419 Haloacid dehalogenase-like hydrolase J164_03506 PF00162 Phosphoglycerate kinase J164_03507 PF13163 J164_03507 J164_03508 PF13163 J164_03508 J164_03509 PF10101 J164_03509 J164_03511 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J164_03511 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J164_03512 PF08332 Calcium/calmodulin dependent protein kinase II Association J164_03513 PF03922 OmpW family J164_03514 PF03922 OmpW family J164_03515 PF02265 S1/P1 Nuclease J164_03516 PF00753 Metallo-beta-lactamase superfamily J164_03517 PF13531 Bacterial extracellular solute-binding protein J164_03518 PF00528 Binding-protein-dependent transport system inner membrane component J164_03519 PF00005 ABC transporter J164_03521 PF03544 Gram-negative bacterial TonB protein C-terminal J164_03521 PF05569 BlaR1 peptidase M56 J164_03522 PF03965 Penicillinase repressor J164_03523 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J164_03524 PF16670 J164_03524 J164_03525 PF00593 TonB dependent receptor J164_03525 PF07715 TonB-dependent Receptor Plug Domain J164_03526 PF01471 Putative peptidoglycan binding domain J164_03526 PF03734 L,D-transpeptidase catalytic domain J164_03527 PF01551 Peptidase family M23 J164_03529 PF00593 TonB dependent receptor J164_03529 PF07715 TonB-dependent Receptor Plug Domain J164_03530 PF12146 Putative lysophospholipase J164_03531 PF00456 Transketolase, thiamine diphosphate binding domain J164_03531 PF02779 Transketolase, pyrimidine binding domain J164_03531 PF02780 Transketolase, C-terminal domain J164_03532 PF00375 Sodium:dicarboxylate symporter family J164_03533 PF13584 J164_03533 J164_03534 PF00515 Tetratricopeptide repeat J164_03534 PF13519 von Willebrand factor type A domain J164_03535 PF00092 von Willebrand factor type A domain J164_03536 PF14316 J164_03536 J164_03537 PF01882 J164_03537 J164_03538 PF07726 ATPase family associated with various cellular activities (AAA) J164_03540 PF00263 J164_03540 J164_03540 PF03958 Bacterial type II/III secretion system short domain J164_03540 PF07660 Secretin and TonB N terminus short domain J164_03541 PF04351 Pilus assembly protein, PilP J164_03542 PF04350 Pilus assembly protein, PilO J164_03543 PF05137 J164_03543 J164_03544 PF11104 Type IV pilus assembly protein PilM; J164_03545 PF00905 Penicillin binding protein transpeptidase domain J164_03545 PF00912 Transglycosylase J164_03545 PF17092 J164_03545 J164_03548 PF00285 Citrate synthase J164_03549 PF01197 Ribosomal protein L31 J164_03550 PF01156 Inosine-uridine preferring nucleoside hydrolase J164_03551 PF00270 DEAD/DEAH box helicase J164_03551 PF00271 Helicase conserved C-terminal domain J164_03551 PF17191 J164_03551 J164_03552 PF01042 Endoribonuclease L-PSP J164_03553 PF02824 TGS domain J164_03553 PF04607 Region found in RelA / SpoT proteins J164_03553 PF13291 ACT domain J164_03553 PF13328 HD domain J164_03554 PF01192 RNA polymerase Rpb6 J164_03555 PF00625 Guanylate kinase J164_03556 PF03755 J164_03556 J164_03556 PF08340 J164_03556 J164_03557 PF01138 3' exoribonuclease family, domain 1 J164_03557 PF03725 3' exoribonuclease family, domain 2 J164_03558 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_03559 PF01725 Ham1 family J164_03560 PF04055 Radical SAM superfamily J164_03560 PF06969 HemN C-terminal domain J164_03561 PF07793 J164_03561 J164_03562 PF07238 PilZ domain J164_03563 PF00557 Metallopeptidase family M24 J164_03565 PF00557 Metallopeptidase family M24 J164_03566 PF00557 Metallopeptidase family M24 J164_03566 PF05195 Aminopeptidase P, N-terminal domain J164_03567 PF03695 Uncharacterised protein family (UPF0149) J164_03569 PF05164 Cell division protein ZapA J164_03571 PF01812 5-formyltetrahydrofolate cyclo-ligase family J164_03572 PF01878 EVE domain J164_03573 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J164_03574 PF02643 Uncharacterized ACR, COG1430 J164_03575 PF13369 J164_03575 J164_03575 PF13371 Tetratricopeptide repeat J164_03576 PF00301 Rubredoxin J164_03577 PF02581 Thiamine monophosphate synthase/TENI J164_03578 PF07715 TonB-dependent Receptor Plug Domain J164_03580 PF00202 Aminotransferase class-III J164_03581 PF00196 Bacterial regulatory proteins, luxR family J164_03581 PF13424 Tetratricopeptide repeat J164_03581 PF13481 AAA domain J164_03582 PF00127 Copper binding proteins, plastocyanin/azurin family J164_03583 PF00155 Aminotransferase class I and II J164_03584 PF01042 Endoribonuclease L-PSP J164_03585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J164_03586 PF01593 Flavin containing amine oxidoreductase J164_03587 PF00593 TonB dependent receptor J164_03587 PF07715 TonB-dependent Receptor Plug Domain J164_03589 PF00202 Aminotransferase class-III J164_03590 PF00520 Ion transport protein J164_03591 PF00106 short chain dehydrogenase J164_03593 PF01569 PAP2 superfamily J164_03593 PF09335 J164_03593 J164_03593 PF14067 J164_03593 J164_03594 PF01062 J164_03594 J164_03595 PF02190 ATP-dependent protease La (LON) domain J164_03596 PF01225 Mur ligase family, catalytic domain J164_03596 PF02875 Mur ligase family, glutamate ligase domain J164_03596 PF08245 Mur ligase middle domain J164_03597 PF00406 Adenylate kinase J164_03598 PF00365 Phosphofructokinase J164_03600 PF03030 Inorganic H+ pyrophosphatase J164_03602 PF00719 Inorganic pyrophosphatase J164_03603 PF08668 HDOD domain J164_03604 PF00593 TonB dependent receptor J164_03604 PF07715 TonB-dependent Receptor Plug Domain J164_03605 PF12833 Helix-turn-helix domain J164_03606 PF00486 Transcriptional regulatory protein, C terminal J164_03606 PF07676 WD40-like Beta Propeller Repeat J164_03607 PF01964 ThiC family J164_03607 PF13667 ThiC-associated domain J164_03609 PF00593 TonB dependent receptor J164_03609 PF07715 TonB-dependent Receptor Plug Domain J164_03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03611 PF01019 Gamma-glutamyltranspeptidase J164_03612 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J164_03612 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain J164_03613 PF00205 Thiamine pyrophosphate enzyme, central domain J164_03613 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J164_03613 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J164_03614 PF13710 ACT domain J164_03615 PF00291 Pyridoxal-phosphate dependent enzyme J164_03616 PF00682 HMGL-like J164_03616 PF08502 LeuA allosteric (dimerisation) domain J164_03617 PF00180 Isocitrate/isopropylmalate dehydrogenase J164_03618 PF00694 Aconitase C-terminal domain J164_03619 PF00330 Aconitase family (aconitate hydratase) J164_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03620 PF03466 LysR substrate binding domain J164_03621 PF00990 GGDEF domain J164_03621 PF07494 Two component regulator propeller J164_03621 PF07495 Y_Y_Y domain J164_03622 PF00440 Bacterial regulatory proteins, tetR family J164_03622 PF14246 AefR-like transcriptional repressor, C-terminal region J164_03623 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J164_03624 PF02321 Outer membrane efflux protein J164_03625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J164_03626 PF03279 J164_03626 J164_03627 PF04932 J164_03627 J164_03628 PF00534 Glycosyl transferases group 1 J164_03628 PF13439 Glycosyltransferase Family 4 J164_03629 PF10276 Zinc-finger domain J164_03630 PF07971 Glycosyl hydrolase family 92 J164_03631 PF00390 Malic enzyme, N-terminal domain J164_03631 PF01515 Phosphate acetyl/butaryl transferase J164_03631 PF03949 Malic enzyme, NAD binding domain J164_03632 PF00375 Sodium:dicarboxylate symporter family J164_03633 PF07396 Phosphate-selective porin O and P J164_03634 PF00072 Response regulator receiver domain J164_03634 PF00512 His Kinase A (phospho-acceptor) domain J164_03634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03634 PF02743 Cache domain J164_03634 PF12860 J164_03634 J164_03635 PF00083 Sugar (and other) transporter J164_03636 PF13531 Bacterial extracellular solute-binding protein J164_03637 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03637 PF03466 LysR substrate binding domain J164_03638 PF00248 Aldo/keto reductase family J164_03639 PF12680 SnoaL-like domain J164_03640 PF11512 Agrobacterium tumefaciens protein Atu4866 J164_03642 PF00072 Response regulator receiver domain J164_03642 PF00196 Bacterial regulatory proteins, luxR family J164_03643 PF13531 Bacterial extracellular solute-binding protein J164_03644 PF00512 His Kinase A (phospho-acceptor) domain J164_03644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03644 PF08521 J164_03644 J164_03645 PF00072 Response regulator receiver domain J164_03645 PF00486 Transcriptional regulatory protein, C terminal J164_03646 PF07396 Phosphate-selective porin O and P J164_03647 PF03600 Citrate transporter J164_03649 PF13561 Enoyl-(Acyl carrier protein) reductase J164_03650 PF00356 Bacterial regulatory proteins, lacI family J164_03650 PF13377 Periplasmic binding protein-like domain J164_03651 PF07690 Major Facilitator Superfamily J164_03652 PF00593 TonB dependent receptor J164_03652 PF07715 TonB-dependent Receptor Plug Domain J164_03653 PF00128 Alpha amylase, catalytic domain J164_03654 PF01965 DJ-1/PfpI family J164_03655 PF08014 J164_03655 J164_03656 PF03193 Protein of unknown function, DUF258 J164_03657 PF00155 Aminotransferase class I and II J164_03658 PF13472 GDSL-like Lipase/Acylhydrolase family J164_03659 PF08242 Methyltransferase domain J164_03660 PF00593 TonB dependent receptor J164_03660 PF07715 TonB-dependent Receptor Plug Domain J164_03661 PF01522 Polysaccharide deacetylase J164_03662 PF00462 Glutaredoxin J164_03662 PF00581 Rhodanese-like domain J164_03664 PF06041 Bacterial protein of unknown function (DUF924) J164_03665 PF01527 Transposase J164_03666 PF13683 J164_03666 J164_03667 PF09284 Rhamnogalacturonase B, N-terminal J164_03667 PF14683 Polysaccharide lyase family 4, domain III J164_03667 PF14686 Polysaccharide lyase family 4, domain II J164_03669 PF01670 Glycosyl hydrolase family 12 J164_03670 PF02645 Uncharacterised protein, DegV family COG1307 J164_03671 PF01327 Polypeptide deformylase J164_03672 PF03960 ArsC family J164_03674 PF02225 PA domain J164_03675 PF05420 J164_03675 J164_03675 PF13432 Tetratricopeptide repeat J164_03675 PF14559 Tetratricopeptide repeat J164_03676 PF01270 Glycosyl hydrolases family 8 J164_03677 PF03170 Bacterial cellulose synthase subunit J164_03678 PF00535 Glycosyl transferase family 2 J164_03678 PF07238 PilZ domain J164_03681 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J164_03684 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J164_03684 PF13641 Glycosyltransferase like family 2 J164_03686 PF00535 Glycosyl transferase family 2 J164_03687 PF01636 Phosphotransferase enzyme family J164_03688 PF00593 TonB dependent receptor J164_03688 PF07715 TonB-dependent Receptor Plug Domain J164_03689 PF04973 J164_03689 J164_03690 PF00392 Bacterial regulatory proteins, gntR family J164_03690 PF07702 UTRA domain J164_03692 PF00263 J164_03692 J164_03692 PF03958 Bacterial type II/III secretion system short domain J164_03694 PF10741 J164_03694 J164_03695 PF05137 J164_03695 J164_03696 PF03934 Type II secretion system (T2SS), protein K J164_03698 PF07963 Prokaryotic N-terminal methylation motif J164_03699 PF12019 Type II transport protein GspH J164_03700 PF08334 Type II secretion system (T2SS), protein G J164_03701 PF00482 Type II secretion system (T2SS), protein F J164_03702 PF00437 Type II/IV secretion system protein J164_03702 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J164_03703 PF00082 Subtilase family J164_03703 PF04151 Bacterial pre-peptidase C-terminal domain J164_03704 PF05658 Head domain of trimeric autotransporter adhesin J164_03704 PF05662 Coiled stalk of trimeric autotransporter adhesin J164_03704 PF13018 J164_03704 J164_03705 PF00082 Subtilase family J164_03705 PF04151 Bacterial pre-peptidase C-terminal domain J164_03706 PF03895 YadA-like C-terminal region J164_03706 PF05658 Head domain of trimeric autotransporter adhesin J164_03706 PF05662 Coiled stalk of trimeric autotransporter adhesin J164_03707 PF02769 AIR synthase related protein, C-terminal domain J164_03707 PF13507 CobB/CobQ-like glutamine amidotransferase domain J164_03708 PF10411 Disulfide bond isomerase protein N-terminus J164_03708 PF13098 Thioredoxin-like domain J164_03709 PF00589 Phage integrase family J164_03709 PF02899 Phage integrase, N-terminal SAM-like domain J164_03710 PF06271 J164_03710 J164_03712 PF03739 J164_03712 J164_03713 PF03739 J164_03713 J164_03714 PF00883 Cytosol aminopeptidase family, catalytic domain J164_03714 PF02789 Cytosol aminopeptidase family, N-terminal domain J164_03716 PF04364 DNA polymerase III chi subunit, HolC J164_03717 PF00133 tRNA synthetases class I (I, L, M and V) J164_03717 PF08264 Anticodon-binding domain of tRNA J164_03717 PF10458 Valyl tRNA synthetase tRNA binding arm J164_03718 PF00593 TonB dependent receptor J164_03718 PF07715 TonB-dependent Receptor Plug Domain J164_03719 PF01464 Transglycosylase SLT domain J164_03719 PF14718 Soluble lytic murein transglycosylase L domain J164_03720 PF00544 Pectate lyase J164_03721 PF00583 Acetyltransferase (GNAT) family J164_03723 PF01066 CDP-alcohol phosphatidyltransferase J164_03724 PF13511 J164_03724 J164_03725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J164_03725 PF03129 Anticodon binding domain J164_03725 PF04073 Aminoacyl-tRNA editing domain J164_03726 PF00816 H-NS histone family J164_03727 PF06738 J164_03727 J164_03727 PF12821 J164_03727 J164_03728 PF02405 J164_03728 J164_03729 PF00005 ABC transporter J164_03730 PF02470 J164_03730 J164_03731 PF03886 Protein of unknown function (DUF330) J164_03732 PF13532 2OG-Fe(II) oxygenase superfamily J164_03733 PF01946 Thi4 family J164_03733 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase J164_03734 PF05045 J164_03734 J164_03734 PF14307 J164_03734 J164_03735 PF01144 Coenzyme A transferase J164_03736 PF01144 Coenzyme A transferase J164_03737 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J164_03737 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J164_03737 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J164_03737 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J164_03738 PF00483 Nucleotidyl transferase J164_03738 PF01050 Mannose-6-phosphate isomerase J164_03739 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J164_03739 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J164_03739 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J164_03740 PF04321 RmlD substrate binding domain J164_03741 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J164_03742 PF00483 Nucleotidyl transferase J164_03743 PF16363 J164_03743 J164_03744 PF01012 Electron transfer flavoprotein domain J164_03745 PF00766 Electron transfer flavoprotein FAD-binding domain J164_03745 PF01012 Electron transfer flavoprotein domain J164_03746 PF03706 J164_03746 J164_03747 PF01040 UbiA prenyltransferase family J164_03748 PF01565 FAD binding domain J164_03749 PF00106 short chain dehydrogenase J164_03751 PF01370 NAD dependent epimerase/dehydratase family J164_03752 PF01593 Flavin containing amine oxidoreductase J164_03753 PF04138 J164_03753 J164_03755 PF05721 Phytanoyl-CoA dioxygenase (PhyH) J164_03757 PF00535 Glycosyl transferase family 2 J164_03758 PF08241 Methyltransferase domain J164_03759 PF00005 ABC transporter J164_03759 PF14524 Wzt C-terminal domain J164_03760 PF01061 J164_03760 J164_03761 PF01053 Cys/Met metabolism PLP-dependent enzyme J164_03762 PF00291 Pyridoxal-phosphate dependent enzyme J164_03762 PF00571 CBS domain J164_03763 PF04325 Protein of unknown function (DUF465) J164_03765 PF14346 Domain of unknown function (DUF4398) J164_03766 PF00437 Type II/IV secretion system protein J164_03767 PF13410 Glutathione S-transferase, C-terminal domain J164_03767 PF13417 Glutathione S-transferase, N-terminal domain J164_03768 PF01557 Fumarylacetoacetate (FAA) hydrolase family J164_03769 PF00270 DEAD/DEAH box helicase J164_03769 PF00271 Helicase conserved C-terminal domain J164_03770 PF04253 Transferrin receptor-like dimerisation domain J164_03770 PF04389 Peptidase family M28 J164_03772 PF00593 TonB dependent receptor J164_03772 PF07715 TonB-dependent Receptor Plug Domain J164_03773 PF01242 6-pyruvoyl tetrahydropterin synthase J164_03774 PF09361 J164_03774 J164_03775 PF13500 AAA domain J164_03776 PF13185 GAF domain J164_03777 PF04994 TfoX C-terminal domain J164_03778 PF00756 Putative esterase J164_03779 PF00593 TonB dependent receptor J164_03779 PF07715 TonB-dependent Receptor Plug Domain J164_03780 PF13419 Haloacid dehalogenase-like hydrolase J164_03781 PF00817 impB/mucB/samB family J164_03781 PF11799 impB/mucB/samB family C-terminal domain J164_03782 PF07977 FabA-like domain J164_03783 PF00109 Beta-ketoacyl synthase, N-terminal domain J164_03783 PF02801 Beta-ketoacyl synthase, C-terminal domain J164_03785 PF01432 Peptidase family M3 J164_03786 PF00291 Pyridoxal-phosphate dependent enzyme J164_03788 PF00394 Multicopper oxidase J164_03788 PF07731 Multicopper oxidase J164_03788 PF07732 Multicopper oxidase J164_03789 PF05275 J164_03789 J164_03790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J164_03792 PF01471 Putative peptidoglycan binding domain J164_03796 PF01380 SIS domain J164_03796 PF13522 Glutamine amidotransferase domain J164_03797 PF13437 HlyD family secretion protein J164_03797 PF13533 Biotin-lipoyl like J164_03798 PF00005 ABC transporter J164_03799 PF02687 J164_03799 J164_03799 PF12704 MacB-like periplasmic core domain J164_03800 PF02687 J164_03800 J164_03800 PF12704 MacB-like periplasmic core domain J164_03802 PF00072 Response regulator receiver domain J164_03802 PF00158 Sigma-54 interaction domain J164_03802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03803 PF00132 Bacterial transferase hexapeptide (six repeats) J164_03803 PF12804 MobA-like NTP transferase domain J164_03803 PF14602 Hexapeptide repeat of succinyl-transferase J164_03804 PF04138 J164_03804 J164_03805 PF01817 Chorismate mutase type II J164_03806 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J164_03806 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J164_03807 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J164_03807 PF02874 ATP synthase alpha/beta family, beta-barrel domain J164_03808 PF00231 ATP synthase J164_03809 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J164_03809 PF00306 ATP synthase alpha/beta chain, C terminal domain J164_03809 PF02874 ATP synthase alpha/beta family, beta-barrel domain J164_03810 PF00213 ATP synthase delta (OSCP) subunit J164_03811 PF00430 ATP synthase B/B' CF(0) J164_03812 PF00137 ATP synthase subunit C J164_03813 PF00119 ATP synthase A chain J164_03817 PF00364 Biotin-requiring enzyme J164_03817 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J164_03817 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_03819 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J164_03819 PF00364 Biotin-requiring enzyme J164_03819 PF02817 e3 binding domain J164_03820 PF11101 J164_03820 J164_03821 PF03167 Uracil DNA glycosylase superfamily J164_03822 PF03922 OmpW family J164_03825 PF03180 NLPA lipoprotein J164_03826 PF00528 Binding-protein-dependent transport system inner membrane component J164_03827 PF00005 ABC transporter J164_03827 PF09383 NIL domain J164_03828 PF00892 EamA-like transporter family J164_03829 PF04461 Protein of unknown function (DUF520) J164_03831 PF00072 Response regulator receiver domain J164_03831 PF00512 His Kinase A (phospho-acceptor) domain J164_03831 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03832 PF12146 Putative lysophospholipase J164_03833 PF07209 J164_03833 J164_03834 PF13561 Enoyl-(Acyl carrier protein) reductase J164_03835 PF13419 Haloacid dehalogenase-like hydrolase J164_03836 PF00849 RNA pseudouridylate synthase J164_03837 PF05175 Methyltransferase small domain J164_03839 PF07995 Glucose / Sorbosone dehydrogenase J164_03840 PF11607 Protein of unknown function (DUF3247) J164_03841 PF00072 Response regulator receiver domain J164_03841 PF00512 His Kinase A (phospho-acceptor) domain J164_03841 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_03841 PF08448 PAS fold J164_03841 PF13426 PAS domain J164_03844 PF11454 J164_03844 J164_03845 PF00842 Alanine racemase, C-terminal domain J164_03845 PF01168 Alanine racemase, N-terminal domain J164_03846 PF01266 FAD dependent oxidoreductase J164_03847 PF01037 AsnC family J164_03847 PF13404 AsnC-type helix-turn-helix domain J164_03849 PF01641 SelR domain J164_03850 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme J164_03851 PF01618 J164_03851 J164_03852 PF00691 OmpA family J164_03852 PF13677 J164_03852 J164_03854 PF13223 J164_03854 J164_03856 PF11730 J164_03856 J164_03857 PF01061 J164_03857 J164_03858 PF00005 ABC transporter J164_03859 PF00999 Sodium/hydrogen exchanger family J164_03860 PF02469 Fasciclin domain J164_03861 PF03167 Uracil DNA glycosylase superfamily J164_03861 PF13566 J164_03861 J164_03862 PF04055 Radical SAM superfamily J164_03863 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J164_03864 PF07681 J164_03864 J164_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03865 PF03466 LysR substrate binding domain J164_03866 PF03358 NADPH-dependent FMN reductase J164_03867 PF00248 Aldo/keto reductase family J164_03868 PF00535 Glycosyl transferase family 2 J164_03869 PF01431 Peptidase family M13 J164_03869 PF05649 Peptidase family M13 J164_03870 PF09995 J164_03870 J164_03873 PF13520 Amino acid permease J164_03875 PF00072 Response regulator receiver domain J164_03875 PF04397 LytTr DNA-binding domain J164_03876 PF06580 J164_03876 J164_03877 PF01266 FAD dependent oxidoreductase J164_03879 PF05974 Domain of unknown function (DUF892) J164_03880 PF05067 Manganese containing catalase J164_03883 PF01339 CheB methylesterase J164_03883 PF01739 CheR methyltransferase, SAM binding domain J164_03883 PF03705 CheR methyltransferase, all-alpha domain J164_03883 PF07536 J164_03883 J164_03883 PF08447 PAS fold J164_03883 PF13596 PAS domain J164_03884 PF00072 Response regulator receiver domain J164_03886 PF00072 Response regulator receiver domain J164_03886 PF00158 Sigma-54 interaction domain J164_03886 PF02954 Bacterial regulatory protein, Fis family J164_03888 PF01654 J164_03888 J164_03889 PF02322 J164_03889 J164_03892 PF13561 Enoyl-(Acyl carrier protein) reductase J164_03893 PF16363 J164_03893 J164_03894 PF13692 Glycosyl transferases group 1 J164_03895 PF03275 UDP-galactopyranose mutase J164_03895 PF13450 NAD(P)-binding Rossmann-like domain J164_03897 PF00005 ABC transporter J164_03897 PF00664 ABC transporter transmembrane region J164_03898 PF12244 J164_03898 J164_03899 PF13628 J164_03899 J164_03900 PF00107 Zinc-binding dehydrogenase J164_03900 PF08240 Alcohol dehydrogenase GroES-like domain J164_03900 PF13823 Alcohol dehydrogenase GroES-associated J164_03902 PF03692 J164_03902 J164_03905 PF11828 J164_03905 J164_03906 PF05650 J164_03906 J164_03907 PF05650 J164_03907 J164_03908 PF11445 J164_03908 J164_03909 PF00593 TonB dependent receptor J164_03909 PF07715 TonB-dependent Receptor Plug Domain J164_03910 PF12040 J164_03910 J164_03911 PF12040 J164_03911 J164_03911 PF12679 J164_03911 J164_03912 PF00005 ABC transporter J164_03913 PF00246 Zinc carboxypeptidase J164_03914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03914 PF03466 LysR substrate binding domain J164_03915 PF01042 Endoribonuclease L-PSP J164_03917 PF01527 Transposase J164_03918 PF00665 Integrase core domain J164_03920 PF12849 PBP superfamily domain J164_03921 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J164_03921 PF00672 HAMP domain J164_03922 PF01223 DNA/RNA non-specific endonuclease J164_03923 PF12697 Alpha/beta hydrolase family J164_03924 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03924 PF03466 LysR substrate binding domain J164_03925 PF02525 Flavodoxin-like fold J164_03926 PF03795 YCII-related domain J164_03929 PF07866 Protein of unknown function (DUF1653) J164_03934 PF00557 Metallopeptidase family M24 J164_03935 PF11903 J164_03935 J164_03936 PF05593 J164_03936 J164_03939 PF00140 Sigma-70 factor, region 1 J164_03939 PF03979 Sigma-70 factor, region 1 J164_03939 PF04539 Sigma-70 region 3 J164_03939 PF04542 Sigma-70 region 2 J164_03939 PF04545 Sigma-70, region 4 J164_03939 PF04546 Sigma-70, non-essential region J164_03940 PF02580 D-Tyr-tRNA(Tyr) deacylase J164_03941 PF03279 J164_03941 J164_03942 PF13420 Acetyltransferase (GNAT) domain J164_03943 PF00925 GTP cyclohydrolase II J164_03944 PF03703 J164_03944 J164_03945 PF03703 J164_03945 J164_03946 PF02350 UDP-N-acetylglucosamine 2-epimerase J164_03947 PF00535 Glycosyl transferase family 2 J164_03948 PF04932 J164_03948 J164_03949 PF13231 J164_03949 J164_03950 PF01029 NusB family J164_03950 PF01189 NOL1/NOP2/sun family J164_03951 PF00551 Formyl transferase J164_03951 PF02911 Formyl transferase, C-terminal domain J164_03952 PF01327 Polypeptide deformylase J164_03953 PF01476 LysM domain J164_03954 PF02481 DNA recombination-mediator protein A J164_03955 PF04361 J164_03955 J164_03956 PF00114 Pilin (bacterial filament) J164_03956 PF14237 J164_03956 J164_03957 PF06271 J164_03957 J164_03957 PF14237 J164_03957 J164_03958 PF01131 DNA topoisomerase J164_03958 PF01751 Toprim domain J164_03958 PF13368 J164_03958 J164_03959 PF01300 Telomere recombination J164_03962 PF13561 Enoyl-(Acyl carrier protein) reductase J164_03964 PF01343 Peptidase family S49 J164_03965 PF01554 MatE J164_03966 PF12412 J164_03966 J164_03967 PF11304 J164_03967 J164_03969 PF00270 DEAD/DEAH box helicase J164_03969 PF00271 Helicase conserved C-terminal domain J164_03970 PF00043 Glutathione S-transferase, C-terminal domain J164_03970 PF13417 Glutathione S-transferase, N-terminal domain J164_03971 PF01936 NYN domain J164_03971 PF12872 OST-HTH/LOTUS domain J164_03973 PF07992 Pyridine nucleotide-disulphide oxidoreductase J164_03974 PF03458 J164_03974 J164_03975 PF00140 Sigma-70 factor, region 1 J164_03975 PF04542 Sigma-70 region 2 J164_03975 PF04545 Sigma-70, region 4 J164_03976 PF03167 Uracil DNA glycosylase superfamily J164_03977 PF00072 Response regulator receiver domain J164_03979 PF00005 ABC transporter J164_03980 PF00270 DEAD/DEAH box helicase J164_03980 PF00271 Helicase conserved C-terminal domain J164_03980 PF12300 J164_03980 J164_03981 PF00085 Thioredoxin J164_03982 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J164_03982 PF07497 Rho termination factor, RNA-binding domain J164_03982 PF07498 Rho termination factor, N-terminal domain J164_03983 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J164_03984 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_03984 PF03466 LysR substrate binding domain J164_03986 PF03971 Monomeric isocitrate dehydrogenase J164_03988 PF00270 DEAD/DEAH box helicase J164_03989 PF09704 CRISPR-associated protein (Cas_Cas5) J164_03990 PF09709 J164_03990 J164_03991 PF09709 J164_03991 J164_03992 PF05107 J164_03992 J164_03993 PF01930 Domain of unknown function DUF83 J164_03994 PF01867 CRISPR associated protein Cas1 J164_03995 PF09827 CRISPR associated protein Cas2 J164_03997 PF01476 LysM domain J164_03998 PF14489 QueF-like protein J164_03998 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J164_03999 PF01546 Peptidase family M20/M25/M40 J164_03999 PF07687 Peptidase dimerisation domain J164_04000 PF16576 J164_04000 J164_04001 PF00873 AcrB/AcrD/AcrF family J164_04002 PF00873 AcrB/AcrD/AcrF family J164_04003 PF07063 Domain of unknown function (DUF1338) J164_04006 PF13419 Haloacid dehalogenase-like hydrolase J164_04007 PF13202 EF hand J164_04008 PF13202 EF hand J164_04010 PF14255 J164_04010 J164_04011 PF01427 D-ala-D-ala dipeptidase J164_04012 PF01510 N-acetylmuramoyl-L-alanine amidase J164_04013 PF00877 NlpC/P60 family J164_04013 PF12913 SH3 domain of the SH3b1 type J164_04013 PF12914 SH3 domain of SH3b2 type J164_04014 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J164_04014 PF13378 Enolase C-terminal domain-like J164_04016 PF13520 Amino acid permease J164_04019 PF05360 J164_04019 J164_04020 PF07995 Glucose / Sorbosone dehydrogenase J164_04021 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_04021 PF01915 Glycosyl hydrolase family 3 C-terminal domain J164_04021 PF14310 Fibronectin type III-like domain J164_04022 PF02152 Dihydroneopterin aldolase J164_04023 PF00814 Glycoprotease family J164_04024 PF01165 Ribosomal protein S21 J164_04025 PF09424 Yqey-like protein J164_04026 PF03631 J164_04026 J164_04027 PF01807 CHC2 zinc finger J164_04027 PF08275 DNA primase catalytic core, N-terminal domain J164_04027 PF08278 DNA primase DnaG DnaB-binding J164_04027 PF10410 DnaB-helicase binding domain of primase J164_04027 PF13155 Toprim-like J164_04028 PF13593 SBF-like CPA transporter family (DUF4137) J164_04029 PF13899 Thioredoxin-like J164_04030 PF01040 UbiA prenyltransferase family J164_04031 PF02628 J164_04031 J164_04033 PF02104 J164_04033 J164_04034 PF11137 J164_04034 J164_04035 PF00510 Cytochrome c oxidase subunit III J164_04036 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J164_04038 PF00115 Cytochrome C and Quinol oxidase polypeptide I J164_04039 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J164_04039 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J164_04040 PF10003 J164_04040 J164_04041 PF00171 Aldehyde dehydrogenase family J164_04041 PF01619 Proline dehydrogenase J164_04041 PF14850 DNA-binding domain of Proline dehydrogenase J164_04049 PF00579 tRNA synthetases class I (W and Y) J164_04050 PF01551 Peptidase family M23 J164_04050 PF04225 Opacity-associated protein A LysM-like domain J164_04051 PF03702 Uncharacterised protein family (UPF0075) J164_04053 PF07690 Major Facilitator Superfamily J164_04054 PF03372 Endonuclease/Exonuclease/phosphatase family J164_04055 PF00156 Phosphoribosyl transferase domain J164_04057 PF13614 AAA domain J164_04058 PF02195 ParB-like nuclease domain J164_04059 PF11731 J164_04059 J164_04060 PF01370 NAD dependent epimerase/dehydratase family J164_04061 PF00535 Glycosyl transferase family 2 J164_04062 PF07578 Lipid A Biosynthesis N-terminal domain J164_04064 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J164_04064 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J164_04064 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J164_04064 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J164_04065 PF00692 dUTPase J164_04066 PF02441 Flavoprotein J164_04066 PF04127 DNA / pantothenate metabolism flavoprotein J164_04067 PF04002 RadC-like JAB domain J164_04068 PF00750 tRNA synthetases class I (R) J164_04068 PF03485 Arginyl tRNA synthetase N terminal domain J164_04068 PF05746 DALR anticodon binding domain J164_04069 PF05036 Sporulation related domain J164_04071 PF00106 short chain dehydrogenase J164_04072 PF01757 J164_04072 J164_04073 PF03033 Glycosyltransferase family 28 N-terminal domain J164_04074 PF00501 AMP-binding enzyme J164_04074 PF00550 Phosphopantetheine attachment site J164_04074 PF00668 Condensation domain J164_04074 PF00975 Thioesterase domain J164_04074 PF13193 AMP-binding enzyme C-terminal domain J164_04075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J164_04076 PF01564 Spermine/spermidine synthase J164_04076 PF17284 J164_04076 J164_04077 PF09851 J164_04077 J164_04077 PF14470 Bacterial PH domain J164_04080 PF02838 Glycosyl hydrolase family 20, domain 2 J164_04080 PF07555 beta-N-acetylglucosaminidase J164_04081 PF00543 Nitrogen regulatory protein P-II J164_04082 PF04380 J164_04082 J164_04083 PF01078 Magnesium chelatase, subunit ChlI J164_04083 PF13335 J164_04083 J164_04083 PF13541 Subunit ChlI of Mg-chelatase J164_04084 PF08212 Lipocalin-like domain J164_04086 PF00563 EAL domain J164_04086 PF12792 J164_04086 J164_04087 PF00487 J164_04087 J164_04088 PF00111 2Fe-2S iron-sulfur cluster binding domain J164_04088 PF00175 Oxidoreductase NAD-binding domain J164_04088 PF00970 Oxidoreductase FAD-binding domain J164_04089 PF00440 Bacterial regulatory proteins, tetR family J164_04094 PF01145 SPFH domain / Band 7 family J164_04095 PF01139 tRNA-splicing ligase RtcB J164_04097 PF00326 Prolyl oligopeptidase family J164_04098 PF11379 J164_04098 J164_04102 PF13628 J164_04102 J164_04103 PF01370 NAD dependent epimerase/dehydratase family J164_04103 PF08338 Domain of unknown function (DUF1731) J164_04104 PF00072 Response regulator receiver domain J164_04104 PF00486 Transcriptional regulatory protein, C terminal J164_04105 PF00512 His Kinase A (phospho-acceptor) domain J164_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_04107 PF11769 J164_04107 J164_04109 PF13180 PDZ domain J164_04109 PF13365 Trypsin-like peptidase domain J164_04113 PF01594 J164_04113 J164_04114 PF13419 Haloacid dehalogenase-like hydrolase J164_04115 PF00883 Cytosol aminopeptidase family, catalytic domain J164_04117 PF04542 Sigma-70 region 2 J164_04117 PF08281 Sigma-70, region 4 J164_04118 PF00199 Catalase J164_04119 PF01292 Prokaryotic cytochrome b561 J164_04120 PF06283 Trehalose utilisation J164_04121 PF00072 Response regulator receiver domain J164_04121 PF00196 Bacterial regulatory proteins, luxR family J164_04122 PF07730 Histidine kinase J164_04123 PF16576 J164_04123 J164_04124 PF00005 ABC transporter J164_04125 PF02687 J164_04125 J164_04125 PF12704 MacB-like periplasmic core domain J164_04126 PF02687 J164_04126 J164_04126 PF12704 MacB-like periplasmic core domain J164_04127 PF12697 Alpha/beta hydrolase family J164_04128 PF00892 EamA-like transporter family J164_04129 PF00892 EamA-like transporter family J164_04130 PF00892 EamA-like transporter family J164_04132 PF02225 PA domain J164_04132 PF04389 Peptidase family M28 J164_04133 PF00753 Metallo-beta-lactamase superfamily J164_04134 PF00579 tRNA synthetases class I (W and Y) J164_04135 PF05532 CsbD-like J164_04136 PF08085 J164_04136 J164_04137 PF08085 J164_04137 J164_04138 PF00491 Arginase family J164_04139 PF03259 Roadblock/LC7 domain J164_04143 PF02223 Thymidylate kinase J164_04145 PF05036 Sporulation related domain J164_04146 PF03309 Type III pantothenate kinase J164_04147 PF02237 Biotin protein ligase C terminal domain J164_04147 PF03099 Biotin/lipoate A/B protein ligase family J164_04147 PF08279 HTH domain J164_04149 PF06167 Glucose-regulated metallo-peptidase M90 J164_04150 PF07394 J164_04150 J164_04151 PF08811 J164_04151 J164_04152 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_04153 PF00072 Response regulator receiver domain J164_04153 PF00486 Transcriptional regulatory protein, C terminal J164_04155 PF01207 Dihydrouridine synthase (Dus) J164_04157 PF12796 Ankyrin repeats (3 copies) J164_04158 PF00199 Catalase J164_04158 PF06628 Catalase-related immune-responsive J164_04159 PF13307 Helicase C-terminal domain J164_04162 PF01488 Shikimate / quinate 5-dehydrogenase J164_04162 PF08501 Shikimate dehydrogenase substrate binding domain J164_04163 PF07676 WD40-like Beta Propeller Repeat J164_04164 PF00175 Oxidoreductase NAD-binding domain J164_04164 PF00258 Flavodoxin J164_04164 PF03929 J164_04164 J164_04165 PF01223 DNA/RNA non-specific endonuclease J164_04166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_04166 PF03466 LysR substrate binding domain J164_04167 PF01370 NAD dependent epimerase/dehydratase family J164_04168 PF00490 Delta-aminolevulinic acid dehydratase J164_04171 PF05960 Bacterial protein of unknown function (DUF885) J164_04172 PF00326 Prolyl oligopeptidase family J164_04172 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J164_04173 PF00043 Glutathione S-transferase, C-terminal domain J164_04173 PF02798 Glutathione S-transferase, N-terminal domain J164_04174 PF00593 TonB dependent receptor J164_04174 PF07715 TonB-dependent Receptor Plug Domain J164_04175 PF07277 J164_04175 J164_04176 PF13621 Cupin-like domain J164_04177 PF04820 Tryptophan halogenase J164_04178 PF03544 Gram-negative bacterial TonB protein C-terminal J164_04179 PF12679 J164_04179 J164_04180 PF00005 ABC transporter J164_04181 PF00561 alpha/beta hydrolase fold J164_04181 PF08386 TAP-like protein J164_04182 PF01381 Helix-turn-helix J164_04184 PF01229 Glycosyl hydrolases family 39 J164_04185 PF02583 Metal-sensitive transcriptional repressor J164_04186 PF01545 Cation efflux family J164_04187 PF03929 J164_04187 J164_04188 PF00593 TonB dependent receptor J164_04188 PF07715 TonB-dependent Receptor Plug Domain J164_04189 PF11287 J164_04189 J164_04190 PF01965 DJ-1/PfpI family J164_04190 PF12833 Helix-turn-helix domain J164_04191 PF00175 Oxidoreductase NAD-binding domain J164_04191 PF00970 Oxidoreductase FAD-binding domain J164_04192 PF00005 ABC transporter J164_04193 PF01061 J164_04193 J164_04195 PF12686 J164_04195 J164_04196 PF02558 Ketopantoate reductase PanE/ApbA J164_04196 PF08546 Ketopantoate reductase PanE/ApbA C terminal J164_04198 PF03061 Thioesterase superfamily J164_04200 PF00085 Thioredoxin J164_04201 PF00258 Flavodoxin J164_04202 PF00268 Ribonucleotide reductase, small chain J164_04203 PF00317 Ribonucleotide reductase, all-alpha domain J164_04203 PF02867 Ribonucleotide reductase, barrel domain J164_04204 PF04332 J164_04204 J164_04205 PF13302 Acetyltransferase (GNAT) domain J164_04205 PF13380 CoA binding domain J164_04205 PF13549 ATP-grasp domain J164_04205 PF13607 Succinyl-CoA ligase like flavodoxin domain J164_04206 PF00571 CBS domain J164_04206 PF01769 Divalent cation transporter J164_04206 PF03448 MgtE intracellular N domain J164_04207 PF00194 Eukaryotic-type carbonic anhydrase J164_04208 PF00999 Sodium/hydrogen exchanger family J164_04208 PF02254 TrkA-N domain J164_04209 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J164_04209 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J164_04210 PF00723 Glycosyl hydrolases family 15 J164_04212 PF00023 Ankyrin repeat J164_04212 PF12796 Ankyrin repeats (3 copies) J164_04213 PF05166 YcgL domain J164_04214 PF00109 Beta-ketoacyl synthase, N-terminal domain J164_04214 PF02801 Beta-ketoacyl synthase, C-terminal domain J164_04215 PF13723 J164_04215 J164_04216 PF00535 Glycosyl transferase family 2 J164_04217 PF04820 Tryptophan halogenase J164_04217 PF13450 NAD(P)-binding Rossmann-like domain J164_04219 PF13561 Enoyl-(Acyl carrier protein) reductase J164_04222 PF03176 MMPL family J164_04226 PF03279 J164_04226 J164_04227 PF07977 FabA-like domain J164_04228 PF01553 Acyltransferase J164_04230 PF00550 Phosphopantetheine attachment site J164_04231 PF04820 Tryptophan halogenase J164_04234 PF00501 AMP-binding enzyme J164_04235 PF00326 Prolyl oligopeptidase family J164_04235 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J164_04238 PF01218 Coproporphyrinogen III oxidase J164_04239 PF00476 DNA polymerase family A J164_04239 PF01367 5'-3' exonuclease, C-terminal SAM fold J164_04239 PF01612 3'-5' exonuclease J164_04239 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J164_04240 PF11191 Protein of unknown function (DUF2782) J164_04241 PF06812 J164_04241 J164_04242 PF05860 haemagglutination activity domain J164_04243 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J164_04243 PF08479 POTRA domain, ShlB-type J164_04245 PF00069 Protein kinase domain J164_04245 PF03781 Sulfatase-modifying factor enzyme 1 J164_04246 PF13672 Protein phosphatase 2C J164_04247 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) J164_04248 PF06744 J164_04248 J164_04248 PF06761 J164_04248 J164_04248 PF14331 J164_04248 J164_04249 PF00691 OmpA family J164_04249 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) J164_04250 PF05936 J164_04250 J164_04251 PF00498 FHA domain J164_04253 PF05954 Phage late control gene D protein (GPD) J164_04254 PF00515 Tetratricopeptide repeat J164_04254 PF13489 Methyltransferase domain J164_04255 PF05488 PAAR motif J164_04256 PF00069 Protein kinase domain J164_04256 PF13374 Tetratricopeptide repeat J164_04256 PF13424 Tetratricopeptide repeat J164_04257 PF07638 ECF sigma factor J164_04258 PF04542 Sigma-70 region 2 J164_04258 PF08281 Sigma-70, region 4 J164_04259 PF04773 FecR protein J164_04259 PF16220 J164_04259 J164_04259 PF16344 J164_04259 J164_04260 PF00593 TonB dependent receptor J164_04260 PF07715 TonB-dependent Receptor Plug Domain J164_04261 PF00328 Histidine phosphatase superfamily (branch 2) J164_04262 PF01419 Jacalin-like lectin domain J164_04266 PF01609 Transposase DDE domain J164_04268 PF00004 ATPase family associated with various cellular activities (AAA) J164_04268 PF07724 AAA domain (Cdc48 subfamily) J164_04268 PF10431 C-terminal, D2-small domain, of ClpB protein J164_04269 PF06996 J164_04269 J164_04270 PF05947 J164_04270 J164_04271 PF04965 Gene 25-like lysozyme J164_04272 PF07024 ImpE protein J164_04273 PF05638 Protein of unknown function (DUF796) J164_04274 PF05943 J164_04274 J164_04275 PF05591 J164_04275 J164_04276 PF12833 Helix-turn-helix domain J164_04277 PF00582 Universal stress protein family J164_04278 PF00132 Bacterial transferase hexapeptide (six repeats) J164_04278 PF12464 Maltose acetyltransferase J164_04279 PF00580 UvrD/REP helicase N-terminal domain J164_04279 PF13361 UvrD-like helicase C-terminal domain J164_04280 PF13454 FAD-NAD(P)-binding J164_04281 PF13091 PLD-like domain J164_04281 PF13396 J164_04281 J164_04282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_04282 PF03466 LysR substrate binding domain J164_04283 PF03737 Demethylmenaquinone methyltransferase J164_04284 PF04303 PrpF protein J164_04285 PF04909 Amidohydrolase J164_04286 PF00471 Ribosomal protein L33 J164_04287 PF00830 Ribosomal L28 family J164_04288 PF00873 AcrB/AcrD/AcrF family J164_04289 PF16576 J164_04289 J164_04290 PF02321 Outer membrane efflux protein J164_04292 PF05960 Bacterial protein of unknown function (DUF885) J164_04293 PF02527 rRNA small subunit methyltransferase G J164_04294 PF09423 PhoD-like phosphatase J164_04294 PF16655 J164_04294 J164_04296 PF09423 PhoD-like phosphatase J164_04296 PF16655 J164_04296 J164_04297 PF01648 4'-phosphopantetheinyl transferase superfamily J164_04298 PF04226 J164_04298 J164_04299 PF04828 Glutathione-dependent formaldehyde-activating enzyme J164_04300 PF03372 Endonuclease/Exonuclease/phosphatase family J164_04302 PF00480 ROK family J164_04304 PF13616 PPIC-type PPIASE domain J164_04305 PF03009 Glycerophosphoryl diester phosphodiesterase family J164_04306 PF00474 Sodium:solute symporter family J164_04307 PF04341 J164_04307 J164_04309 PF00501 AMP-binding enzyme J164_04309 PF13193 AMP-binding enzyme C-terminal domain J164_04309 PF16177 J164_04309 J164_04310 PF00072 Response regulator receiver domain J164_04310 PF00196 Bacterial regulatory proteins, luxR family J164_04311 PF14415 Domain of unknown function (DUF4424) J164_04313 PF00578 AhpC/TSA family J164_04315 PF04616 Glycosyl hydrolases family 43 J164_04316 PF00248 Aldo/keto reductase family J164_04317 PF04909 Amidohydrolase J164_04318 PF13561 Enoyl-(Acyl carrier protein) reductase J164_04319 PF01557 Fumarylacetoacetate (FAA) hydrolase family J164_04320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J164_04320 PF13378 Enolase C-terminal domain-like J164_04322 PF05336 Domain of unknown function (DUF718) J164_04323 PF07690 Major Facilitator Superfamily J164_04324 PF01614 Bacterial transcriptional regulator J164_04324 PF09339 IclR helix-turn-helix domain J164_04325 PF02659 J164_04325 J164_04326 PF00072 Response regulator receiver domain J164_04326 PF00512 His Kinase A (phospho-acceptor) domain J164_04326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J164_04326 PF12860 J164_04326 J164_04327 PF15979 J164_04327 J164_04328 PF06165 Glycosyltransferase family 36 J164_04328 PF17167 J164_04328 J164_04329 PF13347 MFS/sugar transport protein J164_04330 PF13671 AAA domain J164_04331 PF13360 PQQ-like domain J164_04335 PF04357 J164_04335 J164_04336 PF01103 Surface antigen J164_04336 PF07244 Surface antigen variable number repeat J164_04336 PF17243 J164_04336 J164_04339 PF01527 Transposase J164_04340 PF00665 Integrase core domain J164_04340 PF13276 J164_04340 J164_04341 PF00005 ABC transporter J164_04341 PF00664 ABC transporter transmembrane region J164_04343 PF02092 J164_04343 J164_04343 PF05746 DALR anticodon binding domain J164_04344 PF02091 Glycyl-tRNA synthetase alpha subunit J164_04345 PF00437 Type II/IV secretion system protein J164_04345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J164_04347 PF00117 Glutamine amidotransferase class-I J164_04349 PF00902 Sec-independent protein translocase protein (TatC) J164_04350 PF02416 mttA/Hcf106 family J164_04351 PF02416 mttA/Hcf106 family J164_04352 PF04366 J164_04352 J164_04353 PF00762 Ferrochelatase J164_04354 PF00561 alpha/beta hydrolase fold J164_04355 PF01863 Protein of unknown function DUF45 J164_04356 PF04381 Putative exonuclease, RdgC J164_04357 PF01171 PP-loop family J164_04359 PF00356 Bacterial regulatory proteins, lacI family J164_04359 PF13377 Periplasmic binding protein-like domain J164_04360 PF03648 Glycosyl hydrolase family 67 N-terminus J164_04360 PF07477 Glycosyl hydrolase family 67 C-terminus J164_04360 PF07488 Glycosyl hydrolase family 67 middle domain J164_04361 PF02837 Glycosyl hydrolases family 2, sugar binding domain J164_04361 PF03629 Domain of unknown function (DUF303) J164_04362 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J164_04362 PF13378 Enolase C-terminal domain-like J164_04363 PF04616 Glycosyl hydrolases family 43 J164_04364 PF00933 Glycosyl hydrolase family 3 N terminal domain J164_04364 PF01915 Glycosyl hydrolase family 3 C-terminal domain J164_04364 PF07691 PA14 domain J164_04364 PF14310 Fibronectin type III-like domain J164_04365 PF01232 Mannitol dehydrogenase Rossmann domain J164_04365 PF08125 Mannitol dehydrogenase C-terminal domain J164_04368 PF01344 Kelch motif J164_04368 PF13964 Kelch motif J164_04369 PF00440 Bacterial regulatory proteins, tetR family J164_04370 PF00171 Aldehyde dehydrogenase family J164_04373 PF00202 Aminotransferase class-III J164_04374 PF00202 Aminotransferase class-III J164_04375 PF00596 Class II Aldolase and Adducin N-terminal domain J164_04376 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J164_04376 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J164_04377 PF09694 J164_04377 J164_04378 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J164_04379 PF08450 SMP-30/Gluconolaconase/LRE-like region J164_04380 PF00331 Glycosyl hydrolase family 10 J164_04381 PF00703 Glycosyl hydrolases family 2 J164_04381 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J164_04381 PF02837 Glycosyl hydrolases family 2, sugar binding domain J164_04381 PF16355 J164_04381 J164_04382 PF02614 Glucuronate isomerase J164_04383 PF00331 Glycosyl hydrolase family 10 J164_04385 PF00331 Glycosyl hydrolase family 10 J164_04386 PF07690 Major Facilitator Superfamily J164_04387 PF00593 TonB dependent receptor J164_04387 PF07715 TonB-dependent Receptor Plug Domain J164_04388 PF13347 MFS/sugar transport protein J164_04389 PF04616 Glycosyl hydrolases family 43 J164_04390 PF08212 Lipocalin-like domain J164_04391 PF06877 Regulator of ribonuclease activity B J164_04398 PF04325 Protein of unknown function (DUF465) J164_04399 PF00107 Zinc-binding dehydrogenase J164_04399 PF08240 Alcohol dehydrogenase GroES-like domain J164_04400 PF01553 Acyltransferase J164_04402 PF00356 Bacterial regulatory proteins, lacI family J164_04402 PF13377 Periplasmic binding protein-like domain J164_04403 PF00593 TonB dependent receptor J164_04403 PF13620 Carboxypeptidase regulatory-like domain J164_04404 PF00593 TonB dependent receptor J164_04405 PF04820 Tryptophan halogenase J164_04406 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J164_04407 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J164_04409 PF04337 Protein of unknown function, DUF480 J164_04410 PF14094 J164_04410 J164_04411 PF13302 Acetyltransferase (GNAT) domain J164_04412 PF00580 UvrD/REP helicase N-terminal domain J164_04412 PF13361 UvrD-like helicase C-terminal domain J164_04413 PF00265 Thymidine kinase J164_04414 PF00512 His Kinase A (phospho-acceptor) domain J164_04414 PF01590 GAF domain J164_04415 PF04349 Periplasmic glucan biosynthesis protein, MdoG J164_04416 PF14315 J164_04416 J164_04417 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J164_04417 PF06827 Zinc finger found in FPG and IleRS J164_04417 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J164_04424 PF03594 J164_04424 J164_04425 PF00360 Phytochrome region J164_04425 PF01590 GAF domain J164_04425 PF08446 PAS fold J164_04425 PF08448 PAS fold J164_04426 PF01126 Heme oxygenase J164_04427 PF07690 Major Facilitator Superfamily J164_04428 PF01263 Aldose 1-epimerase J164_04428 PF01471 Putative peptidoglycan binding domain J164_04428 PF13406 Transglycosylase SLT domain J164_04430 PF02810 SEC-C motif J164_04431 PF01925 J164_04431 J164_04432 PF13555 P-loop containing region of AAA domain J164_04432 PF13558 Putative exonuclease SbcCD, C subunit J164_04433 PF13835 J164_04433 J164_04434 PF11855 J164_04434 J164_04435 PF01227 GTP cyclohydrolase I J164_04436 PF12802 MarR family J164_04437 PF07869 J164_04437 J164_04438 PF13437 HlyD family secretion protein J164_04438 PF13533 Biotin-lipoyl like J164_04439 PF02321 Outer membrane efflux protein J164_04440 PF04632 J164_04440 J164_04441 PF00083 Sugar (and other) transporter J164_04442 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J164_04443 PF13091 PLD-like domain J164_04446 PF05016 Plasmid stabilisation system protein J164_04447 PF03869 Arc-like DNA binding domain J164_04448 PF01850 PIN domain J164_04449 PF00756 Putative esterase J164_04450 PF09722 J164_04450 J164_04453 PF00849 RNA pseudouridylate synthase J164_04455 PF01527 Transposase J164_04456 PF00665 Integrase core domain J164_04456 PF13276 J164_04456 J164_04457 PF07080 Protein of unknown function (DUF1348) J164_04458 PF01609 Transposase DDE domain J164_04459 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J164_04459 PF00364 Biotin-requiring enzyme J164_04459 PF02626 Allophanate hydrolase subunit 2 J164_04459 PF02682 Allophanate hydrolase subunit 1 J164_04459 PF02785 Biotin carboxylase C-terminal domain J164_04459 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J164_04460 PF01425 Amidase J164_04461 PF01609 Transposase DDE domain J164_04463 PF07080 Protein of unknown function (DUF1348) J164_04465 PF05299 M61 glycyl aminopeptidase J164_04467 PF01156 Inosine-uridine preferring nucleoside hydrolase J164_04468 PF13245 Part of AAA domain J164_04468 PF13538 UvrD-like helicase C-terminal domain J164_04471 PF00580 UvrD/REP helicase N-terminal domain J164_04471 PF12705 PD-(D/E)XK nuclease superfamily J164_04471 PF13361 UvrD-like helicase C-terminal domain J164_04472 PF04257 Exodeoxyribonuclease V, gamma subunit J164_04474 PF00005 ABC transporter J164_04475 PF02405 J164_04475 J164_04476 PF02470 J164_04476 J164_04477 PF05494 Toluene tolerance, Ttg2 J164_04478 PF13466 STAS domain J164_04479 PF04333 J164_04479 J164_04480 PF14534 Domain of unknown function (DUF4440) J164_04481 PF00255 Glutathione peroxidase J164_04483 PF02646 J164_04483 J164_04484 PF08240 Alcohol dehydrogenase GroES-like domain J164_04484 PF13602 Zinc-binding dehydrogenase J164_04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J164_04485 PF03466 LysR substrate binding domain J164_04487 PF13410 Glutathione S-transferase, C-terminal domain J164_04487 PF13417 Glutathione S-transferase, N-terminal domain J164_04489 PF13520 Amino acid permease J164_04490 PF07971 Glycosyl hydrolase family 92 J164_04491 PF10947 J164_04491 J164_04492 PF00990 GGDEF domain J164_04492 PF01590 GAF domain J164_04492 PF08448 PAS fold J164_04493 PF05651 J164_04493 J164_04493 PF13556 PucR C-terminal helix-turn-helix domain J164_04494 PF02595 Glycerate kinase family J164_04495 PF07690 Major Facilitator Superfamily J164_04496 PF01244 Membrane dipeptidase (Peptidase family M19) J164_04498 PF10672 S-adenosylmethionine-dependent methyltransferase J164_04500 PF03741 J164_04500 J164_04501 PF01694 Rhomboid family J164_04502 PF03009 Glycerophosphoryl diester phosphodiesterase family J164_04503 PF00593 TonB dependent receptor J164_04503 PF07715 TonB-dependent Receptor Plug Domain J164_04504 PF01569 PAP2 superfamily J164_04505 PF01926 50S ribosome-binding GTPase J164_04505 PF10396 GTP-binding protein TrmE N-terminus J164_04505 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE J164_04506 PF00656 Caspase domain J164_04506 PF01522 Polysaccharide deacetylase J164_04506 PF13424 Tetratricopeptide repeat J164_04507 PF02096 60Kd inner membrane protein J164_04507 PF14849 YidC periplasmic domain J164_04508 PF00825 Ribonuclease P J164_04509 PF00468 Ribosomal protein L34