locus-tag class description J169_00001 PF01527 Transposase J169_00003 PF02796 Helix-turn-helix domain of resolvase J169_00003 PF00239 Resolvase, N terminal domain J169_00016 PF07015 VirC1 protein J169_00020 PF03377 TAL effector repeat J169_00024 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J169_00026 PF02796 Helix-turn-helix domain of resolvase J169_00026 PF00239 Resolvase, N terminal domain J169_00032 PF01526 Tn3 transposase DDE domain J169_00032 PF13700 Domain of unknown function (DUF4158) J169_00033 PF13700 Domain of unknown function (DUF4158) J169_00033 PF01526 Tn3 transposase DDE domain J169_00036 PF02796 Helix-turn-helix domain of resolvase J169_00036 PF00239 Resolvase, N terminal domain J169_00037 PF03377 TAL effector repeat J169_00045 PF13406 Transglycosylase SLT domain J169_00046 PF13700 Domain of unknown function (DUF4158) J169_00046 PF01526 Tn3 transposase DDE domain J169_00051 PF01527 Transposase J169_00052 PF03377 TAL effector repeat J169_00056 PF07015 VirC1 protein J169_00069 PF08751 TrwC relaxase J169_00069 PF18340 DNA relaxase TraI 2B/2B-like domain J169_00069 PF07057 DNA helicase TraI J169_00069 PF18272 single-stranded DNA binding TraI N-terminal subdomain J169_00069 PF18272 single-stranded DNA binding TraI N-terminal subdomain J169_00069 PF08751 TrwC relaxase J169_00069 PF18340 DNA relaxase TraI 2B/2B-like domain J169_00069 PF07057 DNA helicase TraI J169_00074 PF01464 Transglycosylase SLT domain J169_00075 PF00437 Type II/IV secretion system protein J169_00076 PF03743 Bacterial conjugation TrbI-like protein J169_00077 PF03524 Conjugal transfer protein J169_00089 PF01527 Transposase J169_00092 PF06613 KorB C-terminal beta-barrel domain J169_00092 PF08535 KorB domain J169_00092 PF02195 ParB-like nuclease domain J169_00093 PF13614 AAA domain J169_00098 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J169_00099 PF02796 Helix-turn-helix domain of resolvase J169_00099 PF00239 Resolvase, N terminal domain J169_00100 PF13333 Integrase core domain J169_00100 PF00665 Integrase core domain J169_00100 PF13276 HTH-like domain J169_00102 PF03377 TAL effector repeat J169_00104 PF13700 Domain of unknown function (DUF4158) J169_00104 PF01526 Tn3 transposase DDE domain J169_00105 PF01526 Tn3 transposase DDE domain J169_00105 PF13700 Domain of unknown function (DUF4158) J169_00108 PF00239 Resolvase, N terminal domain J169_00108 PF02796 Helix-turn-helix domain of resolvase J169_00109 PF08299 Bacterial dnaA protein helix-turn-helix J169_00109 PF11638 DnaA N-terminal domain J169_00109 PF00308 Bacterial dnaA protein J169_00110 PF02767 DNA polymerase III beta subunit, central domain J169_00110 PF00712 DNA polymerase III beta subunit, N-terminal domain J169_00110 PF02768 DNA polymerase III beta subunit, C-terminal domain J169_00111 PF02463 RecF/RecN/SMC N terminal domain J169_00113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00113 PF18053 DNA gyrase B subunit insert domain J169_00113 PF00986 DNA gyrase B subunit, carboxyl terminus J169_00113 PF00204 DNA gyrase B J169_00113 PF01751 Toprim domain J169_00115 PF01435 Peptidase family M48 J169_00117 PF03544 Gram-negative bacterial TonB protein C-terminal J169_00118 PF01618 MotA/TolQ/ExbB proton channel family J169_00119 PF02472 Biopolymer transport protein ExbD/TolR J169_00120 PF02472 Biopolymer transport protein ExbD/TolR J169_00121 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J169_00123 PF13091 PLD-like domain J169_00123 PF13396 Phospholipase_D-nuclease N-terminal J169_00126 PF04055 Radical SAM superfamily J169_00128 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J169_00131 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J169_00131 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J169_00132 PF03572 Peptidase family S41 J169_00132 PF13180 PDZ domain J169_00133 PF01551 Peptidase family M23 J169_00135 PF04389 Peptidase family M28 J169_00137 PF00150 Cellulase (glycosyl hydrolase family 5) J169_00138 PF00150 Cellulase (glycosyl hydrolase family 5) J169_00139 PF00150 Cellulase (glycosyl hydrolase family 5) J169_00140 PF08240 Alcohol dehydrogenase GroES-like domain J169_00140 PF00107 Zinc-binding dehydrogenase J169_00141 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_00141 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J169_00142 PF04898 Glutamate synthase central domain J169_00142 PF01645 Conserved region in glutamate synthase J169_00142 PF01493 GXGXG motif J169_00142 PF00310 Glutamine amidotransferases class-II J169_00146 PF01804 Penicillin amidase J169_00148 PF03466 LysR substrate binding domain J169_00148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00151 PF02397 Bacterial sugar transferase J169_00152 PF02350 UDP-N-acetylglucosamine 2-epimerase J169_00154 PF03808 Glycosyl transferase WecB/TagA/CpsF family J169_00155 PF13439 Glycosyltransferase Family 4 J169_00155 PF00534 Glycosyl transferases group 1 J169_00159 PF00733 Asparagine synthase J169_00159 PF13537 Glutamine amidotransferase domain J169_00162 PF16363 GDP-mannose 4,6 dehydratase J169_00165 PF00005 ABC transporter J169_00165 PF00664 ABC transporter transmembrane region J169_00167 PF00733 Asparagine synthase J169_00167 PF13537 Glutamine amidotransferase domain J169_00172 PF00685 Sulfotransferase domain J169_00189 PF00270 DEAD/DEAH box helicase J169_00189 PF09369 Domain of unknown function (DUF1998) J169_00189 PF00271 Helicase conserved C-terminal domain J169_00190 PF03006 Haemolysin-III related J169_00193 PF00106 short chain dehydrogenase J169_00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00195 PF03466 LysR substrate binding domain J169_00199 PF02525 Flavodoxin-like fold J169_00201 PF01527 Transposase J169_00210 PF05532 CsbD-like J169_00214 PF01447 Thermolysin metallopeptidase, catalytic domain J169_00214 PF02868 Thermolysin metallopeptidase, alpha-helical domain J169_00214 PF16485 Protealysin propeptide J169_00216 PF00293 NUDIX domain J169_00216 PF13344 Haloacid dehalogenase-like hydrolase J169_00219 PF00085 Thioredoxin J169_00220 PF08946 Osmosensory transporter coiled coil J169_00220 PF00083 Sugar (and other) transporter J169_00228 PF17863 AAA lid domain J169_00228 PF07726 ATPase family associated with various cellular activities (AAA) J169_00234 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J169_00235 PF00155 Aminotransferase class I and II J169_00236 PF00593 TonB dependent receptor J169_00236 PF07715 TonB-dependent Receptor Plug Domain J169_00238 PF07883 Cupin domain J169_00239 PF00171 Aldehyde dehydrogenase family J169_00243 PF02735 Ku70/Ku80 beta-barrel domain J169_00244 PF01070 FMN-dependent dehydrogenase J169_00245 PF00144 Beta-lactamase J169_00246 PF07730 Histidine kinase J169_00247 PF00196 Bacterial regulatory proteins, luxR family J169_00247 PF00072 Response regulator receiver domain J169_00251 PF00486 Transcriptional regulatory protein, C terminal J169_00251 PF18500 CadC C-terminal domain 1 J169_00252 PF12241 Trans-2-enoyl-CoA reductase catalytic region J169_00252 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J169_00252 PF07055 Enoyl reductase FAD binding domain J169_00254 PF00294 pfkB family carbohydrate kinase J169_00265 PF01527 Transposase J169_00266 PF13276 HTH-like domain J169_00266 PF00665 Integrase core domain J169_00266 PF13333 Integrase core domain J169_00267 PF11896 Domain of unknown function (DUF3416) J169_00267 PF00128 Alpha amylase, catalytic domain J169_00268 PF00128 Alpha amylase, catalytic domain J169_00268 PF16657 Maltogenic Amylase, C-terminal domain J169_00269 PF00128 Alpha amylase, catalytic domain J169_00269 PF02806 Alpha amylase, C-terminal all-beta domain J169_00269 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J169_00271 PF00248 Aldo/keto reductase family J169_00272 PF00135 Carboxylesterase family J169_00273 PF13472 GDSL-like Lipase/Acylhydrolase family J169_00273 PF07859 alpha/beta hydrolase fold J169_00275 PF03480 Bacterial extracellular solute-binding protein, family 7 J169_00277 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J169_00278 PF04616 Glycosyl hydrolases family 43 J169_00278 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J169_00279 PF00356 Bacterial regulatory proteins, lacI family J169_00280 PF04962 KduI/IolB family J169_00283 PF00657 GDSL-like Lipase/Acylhydrolase J169_00286 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J169_00287 PF01037 Lrp/AsnC ligand binding domain J169_00288 PF00593 TonB dependent receptor J169_00288 PF07715 TonB-dependent Receptor Plug Domain J169_00288 PF07660 Secretin and TonB N terminus short domain J169_00289 PF01734 Patatin-like phospholipase J169_00291 PF00005 ABC transporter J169_00294 PF00005 ABC transporter J169_00295 PF00528 Binding-protein-dependent transport system inner membrane component J169_00297 PF12867 DinB superfamily J169_00297 PF03781 Sulfatase-modifying factor enzyme 1 J169_00300 PF01381 Helix-turn-helix J169_00304 PF10609 NUBPL iron-transfer P-loop NTPase J169_00304 PF01883 Iron-sulfur cluster assembly protein J169_00307 PF13091 PLD-like domain J169_00308 PF03061 Thioesterase superfamily J169_00314 PF08240 Alcohol dehydrogenase GroES-like domain J169_00314 PF00107 Zinc-binding dehydrogenase J169_00316 PF02673 Bacitracin resistance protein BacA J169_00317 PF00120 Glutamine synthetase, catalytic domain J169_00317 PF03951 Glutamine synthetase, beta-Grasp domain J169_00318 PF00543 Nitrogen regulatory protein P-II J169_00319 PF00909 Ammonium Transporter Family J169_00320 PF00989 PAS fold J169_00320 PF00512 His Kinase A (phospho-acceptor) domain J169_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00321 PF00158 Sigma-54 interaction domain J169_00321 PF00072 Response regulator receiver domain J169_00321 PF02954 Bacterial regulatory protein, Fis family J169_00322 PF00080 Copper/zinc superoxide dismutase (SODC) J169_00323 PF00080 Copper/zinc superoxide dismutase (SODC) J169_00324 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J169_00326 PF00108 Thiolase, N-terminal domain J169_00326 PF02803 Thiolase, C-terminal domain J169_00333 PF00581 Rhodanese-like domain J169_00334 PF02556 Preprotein translocase subunit SecB J169_00335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J169_00335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J169_00337 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J169_00337 PF00205 Thiamine pyrophosphate enzyme, central domain J169_00337 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J169_00338 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00339 PF00072 Response regulator receiver domain J169_00339 PF00158 Sigma-54 interaction domain J169_00339 PF02954 Bacterial regulatory protein, Fis family J169_00342 PF07690 Major Facilitator Superfamily J169_00343 PF00588 SpoU rRNA Methylase family J169_00346 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J169_00346 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J169_00347 PF02661 Fic/DOC family J169_00347 PF13784 Fic/DOC family N-terminal J169_00348 PF00561 alpha/beta hydrolase fold J169_00349 PF03692 Putative zinc- or iron-chelating domain J169_00350 PF00501 AMP-binding enzyme J169_00352 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J169_00354 PF07478 D-ala D-ala ligase C-terminus J169_00354 PF01820 D-ala D-ala ligase N-terminus J169_00356 PF03109 ABC1 family J169_00358 PF00849 RNA pseudouridylate synthase J169_00360 PF00472 RF-1 domain J169_00362 PF01112 Asparaginase J169_00363 PF01432 Peptidase family M3 J169_00364 PF12706 Beta-lactamase superfamily domain J169_00367 PF12833 Helix-turn-helix domain J169_00368 PF00999 Sodium/hydrogen exchanger family J169_00369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00369 PF03466 LysR substrate binding domain J169_00370 PF01274 Malate synthase J169_00371 PF00463 Isocitrate lyase family J169_00372 PF00990 Diguanylate cyclase, GGDEF domain J169_00377 PF00326 Prolyl oligopeptidase family J169_00378 PF02785 Biotin carboxylase C-terminal domain J169_00378 PF00289 Biotin carboxylase, N-terminal domain J169_00378 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J169_00378 PF00364 Biotin-requiring enzyme J169_00379 PF01039 Carboxyl transferase domain J169_00380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_00380 PF02770 Acyl-CoA dehydrogenase, middle domain J169_00380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_00391 PF02492 CobW/HypB/UreG, nucleotide-binding domain J169_00391 PF07683 Cobalamin synthesis protein cobW C-terminal domain J169_00395 PF03969 AFG1-like ATPase J169_00396 PF01047 MarR family J169_00397 PF02566 OsmC-like protein J169_00402 PF16884 N-terminal domain of oxidoreductase J169_00402 PF00107 Zinc-binding dehydrogenase J169_00405 PF00849 RNA pseudouridylate synthase J169_00406 PF00593 TonB dependent receptor J169_00408 PF08482 ATP-dependent helicase C-terminal J169_00408 PF00271 Helicase conserved C-terminal domain J169_00408 PF04408 Helicase associated domain (HA2) J169_00408 PF00270 DEAD/DEAH box helicase J169_00409 PF07308 Protein of unknown function (DUF1456) J169_00410 PF00576 HIUase/Transthyretin family J169_00411 PF13454 FAD-NAD(P)-binding J169_00412 PF09349 OHCU decarboxylase J169_00412 PF01014 Uricase J169_00415 PF00266 Aminotransferase class-V J169_00416 PF01546 Peptidase family M20/M25/M40 J169_00416 PF07687 Peptidase dimerisation domain J169_00417 PF03466 LysR substrate binding domain J169_00417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00418 PF07690 Major Facilitator Superfamily J169_00421 PF01425 Amidase J169_00422 PF01156 Inosine-uridine preferring nucleoside hydrolase J169_00424 PF00860 Permease family J169_00425 PF00111 2Fe-2S iron-sulfur cluster binding domain J169_00426 PF00355 Rieske [2Fe-2S] domain J169_00427 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00427 PF03466 LysR substrate binding domain J169_00428 PF01026 TatD related DNase J169_00431 PF03466 LysR substrate binding domain J169_00431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00432 PF07690 Major Facilitator Superfamily J169_00435 PF02146 Sir2 family J169_00436 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J169_00437 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J169_00437 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J169_00439 PF00551 Formyl transferase J169_00440 PF00072 Response regulator receiver domain J169_00440 PF00486 Transcriptional regulatory protein, C terminal J169_00441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00441 PF00672 HAMP domain J169_00441 PF00512 His Kinase A (phospho-acceptor) domain J169_00442 PF00529 HlyD membrane-fusion protein of T1SS J169_00442 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_00443 PF00873 AcrB/AcrD/AcrF family J169_00444 PF02321 Outer membrane efflux protein J169_00446 PF02219 Methylenetetrahydrofolate reductase J169_00447 PF02677 Epoxyqueuosine reductase QueH J169_00448 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00448 PF03466 LysR substrate binding domain J169_00449 PF03358 NADPH-dependent FMN reductase J169_00451 PF08267 Cobalamin-independent synthase, N-terminal domain J169_00451 PF01717 Cobalamin-independent synthase, Catalytic domain J169_00452 PF03812 2-keto-3-deoxygluconate permease J169_00454 PF05368 NmrA-like family J169_00455 PF01638 HxlR-like helix-turn-helix J169_00459 PF00665 Integrase core domain J169_00459 PF13276 HTH-like domain J169_00459 PF13333 Integrase core domain J169_00460 PF01527 Transposase J169_00461 PF13495 Phage integrase, N-terminal SAM-like domain J169_00461 PF00589 Phage integrase family J169_00462 PF00920 Dehydratase family J169_00465 PF00132 Bacterial transferase hexapeptide (six repeats) J169_00466 PF07690 Major Facilitator Superfamily J169_00467 PF01966 HD domain J169_00467 PF11871 Domain of unknown function (DUF3391) J169_00471 PF00171 Aldehyde dehydrogenase family J169_00473 PF01494 FAD binding domain J169_00476 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J169_00476 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J169_00477 PF00230 Major intrinsic protein J169_00478 PF01266 FAD dependent oxidoreductase J169_00478 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J169_00479 PF00455 DeoR C terminal sensor domain J169_00479 PF08220 DeoR-like helix-turn-helix domain J169_00481 PF00355 Rieske [2Fe-2S] domain J169_00482 PF01144 Coenzyme A transferase J169_00483 PF01144 Coenzyme A transferase J169_00484 PF02803 Thiolase, C-terminal domain J169_00484 PF00108 Thiolase, N-terminal domain J169_00485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J169_00485 PF00775 Dioxygenase J169_00487 PF00206 Lyase J169_00487 PF10397 Adenylosuccinate lyase C-terminus J169_00488 PF12146 Serine aminopeptidase, S33 J169_00489 PF02627 Carboxymuconolactone decarboxylase family J169_00491 PF01614 Bacterial transcriptional regulator J169_00491 PF09339 IclR helix-turn-helix domain J169_00493 PF07859 alpha/beta hydrolase fold J169_00494 PF10677 Protein of unknown function (DUF2490) J169_00495 PF01134 Glucose inhibited division protein A J169_00495 PF13932 GidA associated domain J169_00497 PF00291 Pyridoxal-phosphate dependent enzyme J169_00501 PF13649 Methyltransferase domain J169_00503 PF12697 Alpha/beta hydrolase family J169_00505 PF00155 Aminotransferase class I and II J169_00506 PF04055 Radical SAM superfamily J169_00506 PF06968 Biotin and Thiamin Synthesis associated domain J169_00508 PF01040 UbiA prenyltransferase family J169_00512 PF05819 NolX protein J169_00520 PF01313 Bacterial export proteins, family 3 J169_00521 PF00813 FliP family J169_00524 PF00771 FHIPEP family J169_00525 PF01312 FlhB HrpN YscU SpaS Family J169_00528 PF01514 Secretory protein of YscJ/FliF family J169_00531 PF18269 T3SS EscN ATPase C-terminal domain J169_00531 PF02874 ATP synthase alpha/beta family, beta-barrel domain J169_00531 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J169_00533 PF01311 Bacterial export proteins, family 1 J169_00536 PF01464 Transglycosylase SLT domain J169_00539 PF12794 Mechanosensitive ion channel inner membrane domain 1 J169_00539 PF12795 Mechanosensitive ion channel porin domain J169_00539 PF00924 Mechanosensitive ion channel J169_00540 PF00884 Sulfatase J169_00541 PF03109 ABC1 family J169_00542 PF05661 Protein of unknown function (DUF808) J169_00543 PF00990 Diguanylate cyclase, GGDEF domain J169_00543 PF00072 Response regulator receiver domain J169_00544 PF08323 Starch synthase catalytic domain J169_00544 PF00534 Glycosyl transferases group 1 J169_00545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J169_00545 PF02806 Alpha amylase, C-terminal all-beta domain J169_00545 PF00128 Alpha amylase, catalytic domain J169_00546 PF00128 Alpha amylase, catalytic domain J169_00546 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J169_00546 PF11941 Domain of unknown function (DUF3459) J169_00547 PF02446 4-alpha-glucanotransferase J169_00548 PF00128 Alpha amylase, catalytic domain J169_00550 PF00128 Alpha amylase, catalytic domain J169_00550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J169_00551 PF13460 NAD(P)H-binding J169_00554 PF06903 VirK protein J169_00555 PF02321 Outer membrane efflux protein J169_00558 PF00873 AcrB/AcrD/AcrF family J169_00561 PF00271 Helicase conserved C-terminal domain J169_00561 PF00270 DEAD/DEAH box helicase J169_00563 PF02817 e3 binding domain J169_00563 PF00364 Biotin-requiring enzyme J169_00563 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J169_00565 PF02780 Transketolase, C-terminal domain J169_00565 PF02779 Transketolase, pyrimidine binding domain J169_00566 PF00676 Dehydrogenase E1 component J169_00568 PF03301 Tryptophan 2,3-dioxygenase J169_00569 PF00854 POT family J169_00571 PF01047 MarR family J169_00572 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J169_00573 PF04209 homogentisate 1,2-dioxygenase J169_00576 PF03334 Na+/H+ antiporter subunit J169_00577 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J169_00579 PF00361 Proton-conducting membrane transporter J169_00580 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J169_00581 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J169_00581 PF00361 Proton-conducting membrane transporter J169_00581 PF13244 Domain of unknown function (DUF4040) J169_00581 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J169_00584 PF07504 Fungalysin/Thermolysin Propeptide Motif J169_00584 PF01483 Proprotein convertase P-domain J169_00584 PF01447 Thermolysin metallopeptidase, catalytic domain J169_00584 PF02868 Thermolysin metallopeptidase, alpha-helical domain J169_00585 PF00182 Chitinase class I J169_00589 PF01259 SAICAR synthetase J169_00590 PF00226 DnaJ domain J169_00590 PF05099 Tellurite resistance protein TerB J169_00592 PF00834 Ribulose-phosphate 3 epimerase family J169_00593 PF00583 Acetyltransferase (GNAT) family J169_00594 PF00781 Diacylglycerol kinase catalytic domain J169_00595 PF04715 Anthranilate synthase component I, N terminal region J169_00595 PF00425 chorismate binding enzyme J169_00597 PF00117 Glutamine amidotransferase class-I J169_00599 PF00591 Glycosyl transferase family, a/b domain J169_00599 PF02885 Glycosyl transferase family, helical bundle domain J169_00600 PF00218 Indole-3-glycerol phosphate synthase J169_00602 PF00027 Cyclic nucleotide-binding domain J169_00602 PF00325 Bacterial regulatory proteins, crp family J169_00603 PF02675 S-adenosylmethionine decarboxylase J169_00604 PF00893 Small Multidrug Resistance protein J169_00605 PF03232 Ubiquinone biosynthesis protein COQ7 J169_00606 PF00572 Ribosomal protein L13 J169_00607 PF00380 Ribosomal protein S9/S16 J169_00610 PF00293 NUDIX domain J169_00611 PF00210 Ferritin-like domain J169_00612 PF00672 HAMP domain J169_00612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00612 PF01627 Hpt domain J169_00612 PF00072 Response regulator receiver domain J169_00612 PF00512 His Kinase A (phospho-acceptor) domain J169_00612 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J169_00613 PF00486 Transcriptional regulatory protein, C terminal J169_00613 PF00072 Response regulator receiver domain J169_00617 PF01521 Iron-sulphur cluster biosynthesis J169_00620 PF00293 NUDIX domain J169_00620 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J169_00620 PF09297 NADH pyrophosphatase zinc ribbon domain J169_00621 PF03186 CobD/Cbib protein J169_00621 PF17113 Regulatory signalling modulator protein AmpE J169_00624 PF07690 Major Facilitator Superfamily J169_00625 PF03466 LysR substrate binding domain J169_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00626 PF07690 Major Facilitator Superfamily J169_00627 PF12805 FUSC-like inner membrane protein yccS J169_00628 PF02843 Phosphoribosylglycinamide synthetase, C domain J169_00628 PF02844 Phosphoribosylglycinamide synthetase, N domain J169_00628 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J169_00630 PF02142 MGS-like domain J169_00630 PF01808 AICARFT/IMPCHase bienzyme J169_00631 PF01066 CDP-alcohol phosphatidyltransferase J169_00632 PF12147 Putative methyltransferase J169_00632 PF12146 Serine aminopeptidase, S33 J169_00633 PF00782 Dual specificity phosphatase, catalytic domain J169_00639 PF02954 Bacterial regulatory protein, Fis family J169_00642 PF01381 Helix-turn-helix J169_00647 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J169_00647 PF02785 Biotin carboxylase C-terminal domain J169_00647 PF00289 Biotin carboxylase, N-terminal domain J169_00649 PF00364 Biotin-requiring enzyme J169_00650 PF01220 Dehydroquinase class II J169_00651 PF02683 Cytochrome C biogenesis protein transmembrane region J169_00651 PF11412 Disulphide bond corrector protein DsbC J169_00652 PF03091 CutA1 divalent ion tolerance protein J169_00655 PF01852 START domain J169_00657 PF00106 short chain dehydrogenase J169_00658 PF04231 Endonuclease I J169_00659 PF00166 Chaperonin 10 Kd subunit J169_00660 PF00118 TCP-1/cpn60 chaperonin family J169_00662 PF07715 TonB-dependent Receptor Plug Domain J169_00662 PF00593 TonB dependent receptor J169_00663 PF00793 DAHP synthetase I family J169_00666 PF08450 SMP-30/Gluconolactonase/LRE-like region J169_00668 PF03710 Glutamate-ammonia ligase adenylyltransferase J169_00668 PF08335 GlnD PII-uridylyltransferase J169_00669 PF02592 Putative vitamin uptake transporter J169_00672 PF00881 Nitroreductase family J169_00673 PF04264 YceI-like domain J169_00677 PF16957 Malonate decarboxylase, alpha subunit, transporter J169_00678 PF06857 Malonate decarboxylase delta subunit (MdcD) J169_00679 PF01039 Carboxyl transferase domain J169_00681 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J169_00682 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J169_00684 PF00698 Acyl transferase domain J169_00686 PF00392 Bacterial regulatory proteins, gntR family J169_00686 PF07729 FCD domain J169_00687 PF13419 Haloacid dehalogenase-like hydrolase J169_00693 PF07745 Glycosyl hydrolase family 53 J169_00694 PF00456 Transketolase, thiamine diphosphate binding domain J169_00694 PF17831 Pyruvate dehydrogenase E1 component middle domain J169_00695 PF13276 HTH-like domain J169_00695 PF00665 Integrase core domain J169_00695 PF13333 Integrase core domain J169_00696 PF01527 Transposase J169_00697 PF00106 short chain dehydrogenase J169_00700 PF00106 short chain dehydrogenase J169_00702 PF13409 Glutathione S-transferase, N-terminal domain J169_00707 PF12823 Domain of unknown function (DUF3817) J169_00707 PF03176 MMPL family J169_00708 PF00326 Prolyl oligopeptidase family J169_00708 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J169_00709 PF07759 Protein of unknown function (DUF1615) J169_00710 PF00990 Diguanylate cyclase, GGDEF domain J169_00710 PF05230 MASE2 domain J169_00714 PF00892 EamA-like transporter family J169_00715 PF00497 Bacterial extracellular solute-binding proteins, family 3 J169_00718 PF00324 Amino acid permease J169_00720 PF01544 CorA-like Mg2+ transporter protein J169_00722 PF01204 Trehalase J169_00724 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J169_00724 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J169_00729 PF08447 PAS fold J169_00729 PF08448 PAS fold J169_00729 PF00563 EAL domain J169_00729 PF00990 Diguanylate cyclase, GGDEF domain J169_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_00730 PF02203 Tar ligand binding domain homologue J169_00730 PF00672 HAMP domain J169_00731 PF00150 Cellulase (glycosyl hydrolase family 5) J169_00731 PF00553 Cellulose binding domain J169_00732 PF01740 STAS domain J169_00732 PF00916 Sulfate permease family J169_00733 PF08448 PAS fold J169_00733 PF00990 Diguanylate cyclase, GGDEF domain J169_00736 PF13632 Glycosyl transferase family group 2 J169_00738 PF06580 Histidine kinase J169_00738 PF07694 5TMR of 5TMR-LYT J169_00739 PF04397 LytTr DNA-binding domain J169_00739 PF00072 Response regulator receiver domain J169_00740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J169_00740 PF03900 Porphobilinogen deaminase, C-terminal domain J169_00745 PF00326 Prolyl oligopeptidase family J169_00745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J169_00747 PF00155 Aminotransferase class I and II J169_00748 PF00326 Prolyl oligopeptidase family J169_00748 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J169_00749 PF04304 Protein of unknown function (DUF454) J169_00751 PF01678 Diaminopimelate epimerase J169_00753 PF02899 Phage integrase, N-terminal SAM-like domain J169_00753 PF00589 Phage integrase family J169_00754 PF00227 Proteasome subunit J169_00755 PF00004 ATPase family associated with various cellular activities (AAA) J169_00755 PF07724 AAA domain (Cdc48 subfamily) J169_00755 PF10431 C-terminal, D2-small domain, of ClpB protein J169_00757 PF13673 Acetyltransferase (GNAT) domain J169_00758 PF13533 Biotin-lipoyl like J169_00760 PF01209 ubiE/COQ5 methyltransferase family J169_00761 PF00990 Diguanylate cyclase, GGDEF domain J169_00761 PF00563 EAL domain J169_00761 PF03707 Bacterial signalling protein N terminal repeat J169_00762 PF11838 ERAP1-like C-terminal domain J169_00762 PF01433 Peptidase family M1 domain J169_00765 PF13360 PQQ-like domain J169_00766 PF00497 Bacterial extracellular solute-binding proteins, family 3 J169_00769 PF08240 Alcohol dehydrogenase GroES-like domain J169_00769 PF00107 Zinc-binding dehydrogenase J169_00771 PF00158 Sigma-54 interaction domain J169_00771 PF02954 Bacterial regulatory protein, Fis family J169_00771 PF01590 GAF domain J169_00772 PF00294 pfkB family carbohydrate kinase J169_00774 PF04085 rod shape-determining protein MreC J169_00776 PF00905 Penicillin binding protein transpeptidase domain J169_00776 PF03717 Penicillin-binding Protein dimerisation domain J169_00777 PF01098 Cell cycle protein J169_00778 PF00295 Glycosyl hydrolases family 28 J169_00779 PF13406 Transglycosylase SLT domain J169_00780 PF03330 Lytic transglycolase J169_00780 PF05036 Sporulation related domain J169_00781 PF00768 D-alanyl-D-alanine carboxypeptidase J169_00781 PF07943 Penicillin-binding protein 5, C-terminal domain J169_00783 PF04359 Protein of unknown function (DUF493) J169_00784 PF03099 Biotin/lipoate A/B protein ligase family J169_00785 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J169_00785 PF04055 Radical SAM superfamily J169_00786 PF17804 Tail specific protease N-terminal domain J169_00786 PF03572 Peptidase family S41 J169_00786 PF00595 PDZ domain J169_00786 PF11818 C-terminal domain of tail specific protease (DUF3340) J169_00788 PF03466 LysR substrate binding domain J169_00788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_00790 PF01467 Cytidylyltransferase-like J169_00790 PF00293 NUDIX domain J169_00797 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J169_00797 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J169_00798 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J169_00798 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J169_00799 PF04972 BON domain J169_00800 PF00360 Phytochrome region J169_00800 PF01590 GAF domain J169_00800 PF08446 PAS fold J169_00800 PF00512 His Kinase A (phospho-acceptor) domain J169_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00801 PF00072 Response regulator receiver domain J169_00802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00802 PF00512 His Kinase A (phospho-acceptor) domain J169_00803 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J169_00804 PF00106 short chain dehydrogenase J169_00812 PF00263 Bacterial type II and III secretion system protein J169_00812 PF03958 Bacterial type II/III secretion system short domain J169_00813 PF00437 Type II/IV secretion system protein J169_00814 PF00482 Type II secretion system (T2SS), protein F J169_00815 PF07963 Prokaryotic N-terminal methylation motif J169_00815 PF08334 Type II secretion system (T2SS), protein G J169_00816 PF12019 Type II transport protein GspH J169_00816 PF07963 Prokaryotic N-terminal methylation motif J169_00818 PF11612 Type II secretion system (T2SS), protein J J169_00818 PF07963 Prokaryotic N-terminal methylation motif J169_00819 PF03934 Type II secretion system (T2SS), protein K J169_00825 PF16355 Domain of unknown function (DUF4982) J169_00825 PF00703 Glycosyl hydrolases family 2 J169_00825 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J169_00825 PF02837 Glycosyl hydrolases family 2, sugar binding domain J169_00825 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J169_00830 PF07690 Major Facilitator Superfamily J169_00831 PF00356 Bacterial regulatory proteins, lacI family J169_00832 PF01380 SIS domain J169_00833 PF01979 Amidohydrolase family J169_00835 PF01966 HD domain J169_00835 PF01743 Poly A polymerase head domain J169_00835 PF12627 Probable RNA and SrmB- binding site of polymerase A J169_00836 PF00732 GMC oxidoreductase J169_00836 PF05199 GMC oxidoreductase J169_00837 PF00171 Aldehyde dehydrogenase family J169_00838 PF02028 BCCT, betaine/carnitine/choline family transporter J169_00840 PF01323 DSBA-like thioredoxin domain J169_00843 PF00034 Cytochrome c J169_00844 PF01926 50S ribosome-binding GTPase J169_00845 PF00753 Metallo-beta-lactamase superfamily J169_00845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J169_00845 PF10996 Beta-Casp domain J169_00847 PF04107 Glutamate-cysteine ligase family 2(GCS2) J169_00848 PF00672 HAMP domain J169_00848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00848 PF00512 His Kinase A (phospho-acceptor) domain J169_00849 PF00486 Transcriptional regulatory protein, C terminal J169_00849 PF00072 Response regulator receiver domain J169_00852 PF02583 Metal-sensitive transcriptional repressor J169_00853 PF00107 Zinc-binding dehydrogenase J169_00853 PF08240 Alcohol dehydrogenase GroES-like domain J169_00854 PF04828 Glutathione-dependent formaldehyde-activating enzyme J169_00855 PF00756 Putative esterase J169_00856 PF00155 Aminotransferase class I and II J169_00856 PF00392 Bacterial regulatory proteins, gntR family J169_00857 PF02567 Phenazine biosynthesis-like protein J169_00858 PF00892 EamA-like transporter family J169_00860 PF12848 ABC transporter J169_00860 PF00005 ABC transporter J169_00862 PF00464 Serine hydroxymethyltransferase J169_00863 PF03477 ATP cone domain J169_00865 PF01872 RibD C-terminal domain J169_00865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J169_00868 PF00677 Lumazine binding domain J169_00869 PF00925 GTP cyclohydrolase II J169_00869 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J169_00870 PF00885 6,7-dimethyl-8-ribityllumazine synthase J169_00871 PF01029 NusB family J169_00872 PF00586 AIR synthase related protein, N-terminal domain J169_00872 PF02769 AIR synthase related protein, C-terminal domain J169_00876 PF03814 Potassium-transporting ATPase A subunit J169_00878 PF02669 K+-transporting ATPase, c chain J169_00879 PF13492 GAF domain J169_00879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00879 PF13493 Domain of unknown function (DUF4118) J169_00879 PF00512 His Kinase A (phospho-acceptor) domain J169_00879 PF02702 Osmosensitive K+ channel His kinase sensor domain J169_00880 PF00072 Response regulator receiver domain J169_00880 PF00486 Transcriptional regulatory protein, C terminal J169_00883 PF02913 FAD linked oxidases, C-terminal domain J169_00883 PF01565 FAD binding domain J169_00884 PF04307 LexA-binding, inner membrane-associated putative hydrolase J169_00885 PF02021 Uncharacterised protein family UPF0102 J169_00887 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J169_00892 PF02381 MraZ protein, putative antitoxin-like J169_00893 PF01795 MraW methylase family J169_00894 PF04999 Cell division protein FtsL J169_00895 PF00905 Penicillin binding protein transpeptidase domain J169_00895 PF03717 Penicillin-binding Protein dimerisation domain J169_00896 PF08245 Mur ligase middle domain J169_00896 PF02875 Mur ligase family, glutamate ligase domain J169_00896 PF01225 Mur ligase family, catalytic domain J169_00897 PF01225 Mur ligase family, catalytic domain J169_00897 PF02875 Mur ligase family, glutamate ligase domain J169_00897 PF08245 Mur ligase middle domain J169_00898 PF00953 Glycosyl transferase family 4 J169_00899 PF01098 Cell cycle protein J169_00900 PF03033 Glycosyltransferase family 28 N-terminal domain J169_00900 PF04101 Glycosyltransferase family 28 C-terminal domain J169_00901 PF08245 Mur ligase middle domain J169_00901 PF02875 Mur ligase family, glutamate ligase domain J169_00901 PF01225 Mur ligase family, catalytic domain J169_00902 PF07478 D-ala D-ala ligase C-terminus J169_00902 PF01820 D-ala D-ala ligase N-terminus J169_00903 PF03799 Cell division protein FtsQ J169_00903 PF08478 POTRA domain, FtsQ-type J169_00904 PF02491 SHS2 domain inserted in FTSA J169_00905 PF00091 Tubulin/FtsZ family, GTPase domain J169_00905 PF12327 FtsZ family, C-terminal domain J169_00906 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J169_00908 PF01476 LysM domain J169_00908 PF08525 Opacity-associated protein A N-terminal motif J169_00908 PF01551 Peptidase family M23 J169_00909 PF02810 SEC-C motif J169_00909 PF07517 SecA DEAD-like domain J169_00909 PF01043 SecA preprotein cross-linking domain J169_00909 PF07516 SecA Wing and Scaffold domain J169_00910 PF00293 NUDIX domain J169_00912 PF02219 Methylenetetrahydrofolate reductase J169_00915 PF08659 KR domain J169_00915 PF00550 Phosphopantetheine attachment site J169_00915 PF14765 Polyketide synthase dehydratase J169_00915 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_00915 PF16197 Ketoacyl-synthetase C-terminal extension J169_00915 PF00107 Zinc-binding dehydrogenase J169_00915 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_00915 PF00698 Acyl transferase domain J169_00915 PF08240 Alcohol dehydrogenase GroES-like domain J169_00916 PF00082 Subtilase family J169_00916 PF09286 Pro-kumamolisin, activation domain J169_00918 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J169_00919 PF00128 Alpha amylase, catalytic domain J169_00925 PF13649 Methyltransferase domain J169_00926 PF05221 S-adenosyl-L-homocysteine hydrolase J169_00926 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J169_00929 PF00311 Phosphoenolpyruvate carboxylase J169_00934 PF00328 Histidine phosphatase superfamily (branch 2) J169_00935 PF00438 S-adenosylmethionine synthetase, N-terminal domain J169_00935 PF02772 S-adenosylmethionine synthetase, central domain J169_00935 PF02773 S-adenosylmethionine synthetase, C-terminal domain J169_00937 PF13649 Methyltransferase domain J169_00938 PF01207 Dihydrouridine synthase (Dus) J169_00941 PF00294 pfkB family carbohydrate kinase J169_00942 PF01773 Na+ dependent nucleoside transporter N-terminus J169_00942 PF07670 Nucleoside recognition J169_00942 PF07662 Na+ dependent nucleoside transporter C-terminus J169_00943 PF00248 Aldo/keto reductase family J169_00945 PF07715 TonB-dependent Receptor Plug Domain J169_00945 PF00593 TonB dependent receptor J169_00950 PF00528 Binding-protein-dependent transport system inner membrane component J169_00951 PF00005 ABC transporter J169_00953 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J169_00955 PF00005 ABC transporter J169_00956 PF13472 GDSL-like Lipase/Acylhydrolase family J169_00957 PF00486 Transcriptional regulatory protein, C terminal J169_00957 PF00072 Response regulator receiver domain J169_00958 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_00958 PF08521 Two-component sensor kinase N-terminal J169_00958 PF00512 His Kinase A (phospho-acceptor) domain J169_00960 PF01219 Prokaryotic diacylglycerol kinase J169_00964 PF01790 Prolipoprotein diacylglyceryl transferase J169_00965 PF00303 Thymidylate synthase J169_00967 PF00186 Dihydrofolate reductase J169_00968 PF00158 Sigma-54 interaction domain J169_00969 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J169_00969 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_00970 PF00005 ABC transporter J169_00971 PF00528 Binding-protein-dependent transport system inner membrane component J169_00973 PF00296 Luciferase-like monooxygenase J169_00974 PF03358 NADPH-dependent FMN reductase J169_00978 PF00296 Luciferase-like monooxygenase J169_00979 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J169_00980 PF00528 Binding-protein-dependent transport system inner membrane component J169_00983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J169_00983 PF00005 ABC transporter J169_00984 PF00149 Calcineurin-like phosphoesterase J169_00985 PF04379 ApaG domain J169_00986 PF00398 Ribosomal RNA adenine dimethylase J169_00987 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J169_00988 PF09312 SurA N-terminal domain J169_00988 PF00639 PPIC-type PPIASE domain J169_00989 PF03968 OstA-like protein J169_00989 PF04453 LPS transport system D J169_00992 PF00850 Histone deacetylase domain J169_00993 PF01923 Cobalamin adenosyltransferase J169_00995 PF01494 FAD binding domain J169_00996 PF01494 FAD binding domain J169_01000 PF07729 FCD domain J169_01000 PF00392 Bacterial regulatory proteins, gntR family J169_01001 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J169_01002 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J169_01002 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J169_01003 PF03466 LysR substrate binding domain J169_01003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01004 PF00501 AMP-binding enzyme J169_01004 PF13193 AMP-binding enzyme C-terminal domain J169_01005 PF00171 Aldehyde dehydrogenase family J169_01006 PF00378 Enoyl-CoA hydratase/isomerase J169_01010 PF08450 SMP-30/Gluconolactonase/LRE-like region J169_01011 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J169_01011 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J169_01012 PF18125 RlmM ferredoxin-like domain J169_01012 PF01728 FtsJ-like methyltransferase J169_01015 PF00892 EamA-like transporter family J169_01016 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J169_01016 PF00749 tRNA synthetases class I (E and Q), catalytic domain J169_01019 PF00990 Diguanylate cyclase, GGDEF domain J169_01019 PF00072 Response regulator receiver domain J169_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01020 PF00512 His Kinase A (phospho-acceptor) domain J169_01020 PF01627 Hpt domain J169_01020 PF00072 Response regulator receiver domain J169_01020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J169_01020 PF00672 HAMP domain J169_01021 PF00196 Bacterial regulatory proteins, luxR family J169_01021 PF00072 Response regulator receiver domain J169_01023 PF01625 Peptide methionine sulfoxide reductase J169_01025 PF00923 Transaldolase/Fructose-6-phosphate aldolase J169_01026 PF01272 Transcription elongation factor, GreA/GreB, C-term J169_01026 PF14760 Rnk N-terminus J169_01027 PF03466 LysR substrate binding domain J169_01027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01028 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_01028 PF13192 Thioredoxin domain J169_01029 PF00578 AhpC/TSA family J169_01029 PF10417 C-terminal domain of 1-Cys peroxiredoxin J169_01030 PF05175 Methyltransferase small domain J169_01030 PF17827 PrmC N-terminal domain J169_01031 PF00561 alpha/beta hydrolase fold J169_01033 PF00293 NUDIX domain J169_01034 PF01612 3'-5' exonuclease J169_01034 PF00476 DNA polymerase family A J169_01034 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J169_01034 PF01367 5'-3' exonuclease, C-terminal SAM fold J169_01040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J169_01040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J169_01040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J169_01045 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J169_01046 PF02233 NAD(P) transhydrogenase beta subunit J169_01049 PF01063 Amino-transferase class IV J169_01050 PF04151 Bacterial pre-peptidase C-terminal domain J169_01050 PF00082 Subtilase family J169_01051 PF00082 Subtilase family J169_01051 PF04151 Bacterial pre-peptidase C-terminal domain J169_01052 PF00082 Subtilase family J169_01052 PF04151 Bacterial pre-peptidase C-terminal domain J169_01053 PF04073 Aminoacyl-tRNA editing domain J169_01055 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J169_01055 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J169_01058 PF03358 NADPH-dependent FMN reductase J169_01059 PF03631 Virulence factor BrkB J169_01060 PF08534 Redoxin J169_01061 PF00708 Acylphosphatase J169_01063 PF03976 Polyphosphate kinase 2 (PPK2) J169_01064 PF00994 Probable molybdopterin binding domain J169_01066 PF00472 RF-1 domain J169_01066 PF03462 PCRF domain J169_01067 PF01488 Shikimate / quinate 5-dehydrogenase J169_01067 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J169_01067 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J169_01069 PF03550 Outer membrane lipoprotein LolB J169_01070 PF08544 GHMP kinases C terminal J169_01070 PF00288 GHMP kinases N terminal domain J169_01072 PF14572 Phosphoribosyl synthetase-associated domain J169_01072 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J169_01073 PF14693 Ribosomal protein TL5, C-terminal domain J169_01073 PF01386 Ribosomal L25p family J169_01074 PF01195 Peptidyl-tRNA hydrolase J169_01075 PF06071 Protein of unknown function (DUF933) J169_01075 PF01926 50S ribosome-binding GTPase J169_01079 PF03144 Elongation factor Tu domain 2 J169_01079 PF03143 Elongation factor Tu C-terminal domain J169_01079 PF00009 Elongation factor Tu GTP binding domain J169_01081 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J169_01082 PF02357 Transcription termination factor nusG J169_01082 PF00467 KOW motif J169_01083 PF03946 Ribosomal protein L11, N-terminal domain J169_01083 PF00298 Ribosomal protein L11, RNA binding domain J169_01084 PF00687 Ribosomal protein L1p/L10e family J169_01085 PF00466 Ribosomal protein L10 J169_01086 PF00542 Ribosomal protein L7/L12 C-terminal domain J169_01086 PF16320 Ribosomal protein L7/L12 dimerisation domain J169_01088 PF04563 RNA polymerase beta subunit J169_01088 PF04560 RNA polymerase Rpb2, domain 7 J169_01088 PF00562 RNA polymerase Rpb2, domain 6 J169_01088 PF10385 RNA polymerase beta subunit external 1 domain J169_01088 PF04565 RNA polymerase Rpb2, domain 3 J169_01088 PF04561 RNA polymerase Rpb2, domain 2 J169_01089 PF04997 RNA polymerase Rpb1, domain 1 J169_01089 PF04998 RNA polymerase Rpb1, domain 5 J169_01089 PF04983 RNA polymerase Rpb1, domain 3 J169_01089 PF00623 RNA polymerase Rpb1, domain 2 J169_01089 PF05000 RNA polymerase Rpb1, domain 4 J169_01090 PF00164 Ribosomal protein S12/S23 J169_01091 PF00177 Ribosomal protein S7p/S5e J169_01092 PF14492 Elongation Factor G, domain II J169_01092 PF00679 Elongation factor G C-terminus J169_01092 PF03764 Elongation factor G, domain IV J169_01092 PF00009 Elongation factor Tu GTP binding domain J169_01092 PF03144 Elongation factor Tu domain 2 J169_01093 PF03143 Elongation factor Tu C-terminal domain J169_01093 PF03144 Elongation factor Tu domain 2 J169_01093 PF00009 Elongation factor Tu GTP binding domain J169_01094 PF00338 Ribosomal protein S10p/S20e J169_01095 PF00297 Ribosomal protein L3 J169_01096 PF00573 Ribosomal protein L4/L1 family J169_01097 PF00276 Ribosomal protein L23 J169_01098 PF00181 Ribosomal Proteins L2, RNA binding domain J169_01098 PF03947 Ribosomal Proteins L2, C-terminal domain J169_01099 PF00203 Ribosomal protein S19 J169_01100 PF00237 Ribosomal protein L22p/L17e J169_01101 PF07650 KH domain J169_01101 PF00189 Ribosomal protein S3, C-terminal domain J169_01102 PF00252 Ribosomal protein L16p/L10e J169_01103 PF00831 Ribosomal L29 protein J169_01104 PF00366 Ribosomal protein S17 J169_01105 PF00238 Ribosomal protein L14p/L23e J169_01106 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J169_01106 PF00467 KOW motif J169_01107 PF00673 ribosomal L5P family C-terminus J169_01107 PF00281 Ribosomal protein L5 J169_01108 PF00253 Ribosomal protein S14p/S29e J169_01109 PF00410 Ribosomal protein S8 J169_01110 PF00347 Ribosomal protein L6 J169_01111 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J169_01112 PF00333 Ribosomal protein S5, N-terminal domain J169_01112 PF03719 Ribosomal protein S5, C-terminal domain J169_01113 PF00327 Ribosomal protein L30p/L7e J169_01114 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J169_01115 PF00344 SecY translocase J169_01116 PF00416 Ribosomal protein S13/S18 J169_01117 PF00411 Ribosomal protein S11 J169_01118 PF00163 Ribosomal protein S4/S9 N-terminal domain J169_01118 PF01479 S4 domain J169_01119 PF01000 RNA polymerase Rpb3/RpoA insert domain J169_01119 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J169_01119 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J169_01120 PF01196 Ribosomal protein L17 J169_01121 PF02600 Disulfide bond formation protein DsbB J169_01123 PF01474 Class-II DAHP synthetase family J169_01125 PF01425 Amidase J169_01128 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J169_01129 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J169_01129 PF00056 lactate/malate dehydrogenase, NAD binding domain J169_01130 PF02798 Glutathione S-transferase, N-terminal domain J169_01130 PF00043 Glutathione S-transferase, C-terminal domain J169_01132 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J169_01132 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_01133 PF00107 Zinc-binding dehydrogenase J169_01133 PF08240 Alcohol dehydrogenase GroES-like domain J169_01134 PF05736 OprF membrane domain J169_01134 PF00691 OmpA family J169_01136 PF00849 RNA pseudouridylate synthase J169_01138 PF00155 Aminotransferase class I and II J169_01140 PF00528 Binding-protein-dependent transport system inner membrane component J169_01141 PF00528 Binding-protein-dependent transport system inner membrane component J169_01142 PF12857 TOBE-like domain J169_01142 PF17850 CysA C-terminal regulatory domain J169_01142 PF00005 ABC transporter J169_01144 PF08240 Alcohol dehydrogenase GroES-like domain J169_01144 PF00107 Zinc-binding dehydrogenase J169_01146 PF05506 Domain of unknown function (DUF756) J169_01146 PF04185 Phosphoesterase family J169_01147 PF10459 Peptidase S46 J169_01148 PF10459 Peptidase S46 J169_01149 PF00300 Histidine phosphatase superfamily (branch 1) J169_01150 PF02875 Mur ligase family, glutamate ligase domain J169_01150 PF08245 Mur ligase middle domain J169_01153 PF00156 Phosphoribosyl transferase domain J169_01154 PF04305 Protein of unknown function (DUF455) J169_01158 PF00149 Calcineurin-like phosphoesterase J169_01160 PF01569 PAP2 superfamily J169_01161 PF00534 Glycosyl transferases group 1 J169_01161 PF13439 Glycosyltransferase Family 4 J169_01162 PF02541 Ppx/GppA phosphatase family J169_01163 PF17941 Polyphosphate kinase C-terminal domain 1 J169_01163 PF13089 Polyphosphate kinase N-terminal domain J169_01163 PF02503 Polyphosphate kinase middle domain J169_01163 PF13090 Polyphosphate kinase C-terminal domain 2 J169_01164 PF00512 His Kinase A (phospho-acceptor) domain J169_01164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01164 PF00989 PAS fold J169_01164 PF11808 Phosphate regulon sensor protein PhoR J169_01165 PF00072 Response regulator receiver domain J169_01165 PF00486 Transcriptional regulatory protein, C terminal J169_01166 PF01435 Peptidase family M48 J169_01166 PF13181 Tetratricopeptide repeat J169_01167 PF00462 Glutaredoxin J169_01169 PF00180 Isocitrate/isopropylmalate dehydrogenase J169_01176 PF01527 Transposase J169_01199 PF01527 Transposase J169_01200 PF00665 Integrase core domain J169_01200 PF13276 HTH-like domain J169_01200 PF13333 Integrase core domain J169_01203 PF00989 PAS fold J169_01203 PF00512 His Kinase A (phospho-acceptor) domain J169_01203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01206 PF05697 Bacterial trigger factor protein (TF) J169_01206 PF05698 Bacterial trigger factor protein (TF) C-terminus J169_01207 PF00574 Clp protease J169_01208 PF06689 ClpX C4-type zinc finger J169_01208 PF10431 C-terminal, D2-small domain, of ClpB protein J169_01208 PF07724 AAA domain (Cdc48 subfamily) J169_01209 PF00004 ATPase family associated with various cellular activities (AAA) J169_01209 PF05362 Lon protease (S16) C-terminal proteolytic domain J169_01209 PF02190 ATP-dependent protease La (LON) substrate-binding domain J169_01210 PF00216 Bacterial DNA-binding protein J169_01216 PF05257 CHAP domain J169_01216 PF01476 LysM domain J169_01217 PF16123 Hydroxyacylglutathione hydrolase C-terminus J169_01217 PF00753 Metallo-beta-lactamase superfamily J169_01219 PF00075 RNase H J169_01220 PF00929 Exonuclease J169_01224 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J169_01226 PF12706 Beta-lactamase superfamily domain J169_01226 PF00753 Metallo-beta-lactamase superfamily J169_01227 PF06463 Molybdenum Cofactor Synthesis C J169_01227 PF04055 Radical SAM superfamily J169_01228 PF01967 MoaC family J169_01229 PF02597 ThiS family J169_01230 PF02391 MoaE protein J169_01233 PF01527 Transposase J169_01240 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J169_01240 PF12170 DNA polymerase III tau subunit V interacting with alpha J169_01240 PF12169 DNA polymerase III subunits gamma and tau domain III J169_01241 PF02575 YbaB/EbfC DNA-binding family J169_01242 PF02132 RecR protein J169_01242 PF13662 Toprim domain J169_01243 PF01230 HIT domain J169_01245 PF13559 Domain of unknown function (DUF4129) J169_01245 PF01841 Transglutaminase-like superfamily J169_01245 PF11992 Domain of unknown function (DUF3488) J169_01247 PF07726 ATPase family associated with various cellular activities (AAA) J169_01247 PF17863 AAA lid domain J169_01251 PF02545 Maf-like protein J169_01252 PF02620 Large ribosomal RNA subunit accumulation protein YceD J169_01253 PF01783 Ribosomal L32p protein family J169_01254 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J169_01254 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J169_01256 PF00698 Acyl transferase domain J169_01258 PF00550 Phosphopantetheine attachment site J169_01259 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_01259 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_01260 PF00425 chorismate binding enzyme J169_01260 PF04715 Anthranilate synthase component I, N terminal region J169_01261 PF02618 YceG-like family J169_01262 PF09115 DNA polymerase III, delta subunit, C terminal J169_01266 PF02954 Bacterial regulatory protein, Fis family J169_01266 PF06506 Propionate catabolism activator J169_01266 PF00158 Sigma-54 interaction domain J169_01268 PF00285 Citrate synthase, C-terminal domain J169_01269 PF00694 Aconitase C-terminal domain J169_01269 PF00330 Aconitase family (aconitate hydratase) J169_01270 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J169_01272 PF04303 PrpF protein J169_01273 PF07715 TonB-dependent Receptor Plug Domain J169_01273 PF00593 TonB dependent receptor J169_01275 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J169_01275 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J169_01275 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J169_01275 PF17962 Bacterial macroglobulin domain 6 J169_01275 PF01835 MG2 domain J169_01275 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J169_01275 PF00207 Alpha-2-macroglobulin family J169_01275 PF07703 Alpha-2-macroglobulin bait region domain J169_01278 PF00905 Penicillin binding protein transpeptidase domain J169_01278 PF06832 Penicillin-Binding Protein C-terminus Family J169_01278 PF00912 Transglycosylase J169_01280 PF08534 Redoxin J169_01282 PF01556 DnaJ C terminal domain J169_01282 PF00226 DnaJ domain J169_01284 PF00072 Response regulator receiver domain J169_01286 PF12221 Bacterial membrane protein N terminal J169_01286 PF01145 SPFH domain / Band 7 family J169_01287 PF01145 SPFH domain / Band 7 family J169_01289 PF00709 Adenylosuccinate synthetase J169_01290 PF01433 Peptidase family M1 domain J169_01290 PF11838 ERAP1-like C-terminal domain J169_01293 PF00440 Bacterial regulatory proteins, tetR family J169_01306 PF13456 Reverse transcriptase-like J169_01306 PF00300 Histidine phosphatase superfamily (branch 1) J169_01307 PF01256 Carbohydrate kinase J169_01309 PF00723 Glycosyl hydrolases family 15 J169_01311 PF07971 Glycosyl hydrolase family 92 J169_01311 PF17678 Glycosyl hydrolase family 92 N-terminal domain J169_01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_01319 PF17755 UvrA DNA-binding domain J169_01320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J169_01320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J169_01321 PF03450 CO dehydrogenase flavoprotein C-terminal domain J169_01321 PF00941 FAD binding domain in molybdopterin dehydrogenase J169_01322 PF01799 [2Fe-2S] binding domain J169_01322 PF00111 2Fe-2S iron-sulfur cluster binding domain J169_01329 PF01726 LexA DNA binding domain J169_01329 PF00717 Peptidase S24-like J169_01332 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J169_01332 PF14579 Helix-hairpin-helix motif J169_01332 PF02811 PHP domain J169_01332 PF07733 Bacterial DNA polymerase III alpha NTPase domain J169_01333 PF00326 Prolyl oligopeptidase family J169_01335 PF03169 OPT oligopeptide transporter protein J169_01338 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J169_01338 PF00326 Prolyl oligopeptidase family J169_01338 PF07676 WD40-like Beta Propeller Repeat J169_01341 PF02311 AraC-like ligand binding domain J169_01341 PF12833 Helix-turn-helix domain J169_01346 PF06628 Catalase-related immune-responsive J169_01346 PF00199 Catalase J169_01346 PF18011 C-terminal domain found in long catalases J169_01347 PF00248 Aldo/keto reductase family J169_01348 PF00135 Carboxylesterase family J169_01349 PF02347 Glycine cleavage system P-protein J169_01352 PF07690 Major Facilitator Superfamily J169_01355 PF00884 Sulfatase J169_01355 PF08019 Phosphoethanolamine transferase EptA/EptB J169_01358 PF00072 Response regulator receiver domain J169_01358 PF00486 Transcriptional regulatory protein, C terminal J169_01359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01359 PF08521 Two-component sensor kinase N-terminal J169_01359 PF00512 His Kinase A (phospho-acceptor) domain J169_01361 PF03776 Septum formation topological specificity factor MinE J169_01362 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J169_01363 PF05209 Septum formation inhibitor MinC, N-terminal domain J169_01363 PF03775 Septum formation inhibitor MinC, C-terminal domain J169_01365 PF07730 Histidine kinase J169_01366 PF00072 Response regulator receiver domain J169_01366 PF00196 Bacterial regulatory proteins, luxR family J169_01369 PF00730 HhH-GPD superfamily base excision DNA repair protein J169_01374 PF02222 ATP-grasp domain J169_01376 PF04376 Arginine-tRNA-protein transferase, N terminus J169_01376 PF04377 Arginine-tRNA-protein transferase, C terminus J169_01382 PF00378 Enoyl-CoA hydratase/isomerase J169_01385 PF17755 UvrA DNA-binding domain J169_01385 PF00005 ABC transporter J169_01385 PF17760 UvrA interaction domain J169_01386 PF00829 Ribosomal prokaryotic L21 protein J169_01387 PF01016 Ribosomal L27 protein J169_01388 PF01926 50S ribosome-binding GTPase J169_01388 PF01018 GTP1/OBG J169_01389 PF01649 Ribosomal protein S20 J169_01390 PF03023 Lipid II flippase MurJ J169_01391 PF01687 Riboflavin kinase J169_01391 PF06574 FAD synthetase J169_01392 PF00133 tRNA synthetases class I (I, L, M and V) J169_01392 PF08264 Anticodon-binding domain of tRNA J169_01392 PF06827 Zinc finger found in FPG and IleRS J169_01393 PF01252 Signal peptidase (SPase) II J169_01394 PF02401 LytB protein J169_01396 PF06481 COX Aromatic Rich Motif J169_01396 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J169_01397 PF00115 Cytochrome C and Quinol oxidase polypeptide I J169_01398 PF00510 Cytochrome c oxidase subunit III J169_01399 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J169_01401 PF18073 Rubredoxin metal binding domain J169_01402 PF05656 Protein of unknown function (DUF805) J169_01404 PF12833 Helix-turn-helix domain J169_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01405 PF00183 Hsp90 protein J169_01407 PF01740 STAS domain J169_01407 PF08678 Rsbr N terminal J169_01408 PF01740 STAS domain J169_01409 PF13581 Histidine kinase-like ATPase domain J169_01411 PF00512 His Kinase A (phospho-acceptor) domain J169_01411 PF01627 Hpt domain J169_01411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01411 PF00672 HAMP domain J169_01411 PF17149 Periplasmic sensor domain found in signal transduction proteins J169_01411 PF00072 Response regulator receiver domain J169_01412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01412 PF00512 His Kinase A (phospho-acceptor) domain J169_01412 PF08448 PAS fold J169_01412 PF13188 PAS domain J169_01412 PF00072 Response regulator receiver domain J169_01413 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J169_01413 PF04616 Glycosyl hydrolases family 43 J169_01414 PF07715 TonB-dependent Receptor Plug Domain J169_01414 PF00593 TonB dependent receptor J169_01415 PF00085 Thioredoxin J169_01416 PF07237 Protein of unknown function (DUF1428) J169_01417 PF00512 His Kinase A (phospho-acceptor) domain J169_01417 PF13492 GAF domain J169_01417 PF13493 Domain of unknown function (DUF4118) J169_01417 PF02702 Osmosensitive K+ channel His kinase sensor domain J169_01417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01418 PF01339 CheB methylesterase J169_01419 PF03705 CheR methyltransferase, all-alpha domain J169_01419 PF01739 CheR methyltransferase, SAM binding domain J169_01420 PF00512 His Kinase A (phospho-acceptor) domain J169_01420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J169_01420 PF00672 HAMP domain J169_01420 PF00072 Response regulator receiver domain J169_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01420 PF01627 Hpt domain J169_01421 PF13426 PAS domain J169_01421 PF00072 Response regulator receiver domain J169_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01422 PF00072 Response regulator receiver domain J169_01423 PF00722 Glycosyl hydrolases family 16 J169_01424 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J169_01425 PF01263 Aldose 1-epimerase J169_01426 PF01578 Cytochrome C assembly protein J169_01427 PF02978 Signal peptide binding domain J169_01427 PF02881 SRP54-type protein, helical bundle domain J169_01427 PF00448 SRP54-type protein, GTPase domain J169_01428 PF03060 Nitronate monooxygenase J169_01429 PF01063 Amino-transferase class IV J169_01430 PF00886 Ribosomal protein S16 J169_01431 PF01782 RimM N-terminal domain J169_01431 PF05239 PRC-barrel domain J169_01432 PF01746 tRNA (Guanine-1)-methyltransferase J169_01433 PF01245 Ribosomal protein L19 J169_01434 PF01554 MatE J169_01435 PF01554 MatE J169_01438 PF01479 S4 domain J169_01439 PF00141 Peroxidase J169_01441 PF05190 MutS family domain IV J169_01441 PF05188 MutS domain II J169_01441 PF00488 MutS domain V J169_01441 PF01624 MutS domain I J169_01441 PF05192 MutS domain III J169_01444 PF03527 RHS protein J169_01444 PF05593 RHS Repeat J169_01448 PF02837 Glycosyl hydrolases family 2, sugar binding domain J169_01448 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J169_01448 PF00703 Glycosyl hydrolases family 2 J169_01448 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J169_01448 PF16355 Domain of unknown function (DUF4982) J169_01449 PF07745 Glycosyl hydrolase family 53 J169_01451 PF06114 IrrE N-terminal-like domain J169_01451 PF01381 Helix-turn-helix J169_01451 PF09856 Predicted transcriptional regulator (DUF2083) J169_01452 PF00171 Aldehyde dehydrogenase family J169_01453 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_01453 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_01453 PF02770 Acyl-CoA dehydrogenase, middle domain J169_01454 PF00378 Enoyl-CoA hydratase/isomerase J169_01455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J169_01455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J169_01455 PF00378 Enoyl-CoA hydratase/isomerase J169_01456 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J169_01456 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J169_01457 PF01545 Cation efflux family J169_01458 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J169_01458 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J169_01458 PF00378 Enoyl-CoA hydratase/isomerase J169_01459 PF04542 Sigma-70 region 2 J169_01459 PF08281 Sigma-70, region 4 J169_01461 PF13180 PDZ domain J169_01462 PF00679 Elongation factor G C-terminus J169_01462 PF06421 GTP-binding protein LepA C-terminus J169_01462 PF03144 Elongation factor Tu domain 2 J169_01462 PF00009 Elongation factor Tu GTP binding domain J169_01463 PF10502 Signal peptidase, peptidase S26 J169_01465 PF00035 Double-stranded RNA binding motif J169_01465 PF14622 Ribonuclease-III-like J169_01466 PF07650 KH domain J169_01466 PF01926 50S ribosome-binding GTPase J169_01467 PF02565 Recombination protein O C terminal J169_01467 PF11967 Recombination protein O N terminal J169_01469 PF05958 tRNA (Uracil-5-)-methyltransferase J169_01471 PF01323 DSBA-like thioredoxin domain J169_01472 PF01593 Flavin containing amine oxidoreductase J169_01473 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J169_01474 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_01476 PF01048 Phosphorylase superfamily J169_01477 PF00313 'Cold-shock' DNA-binding domain J169_01478 PF01494 FAD binding domain J169_01480 PF00270 DEAD/DEAH box helicase J169_01480 PF08494 DEAD/H associated J169_01480 PF00271 Helicase conserved C-terminal domain J169_01481 PF04679 ATP dependent DNA ligase C terminal region J169_01481 PF01068 ATP dependent DNA ligase domain J169_01481 PF04675 DNA ligase N terminus J169_01483 PF04679 ATP dependent DNA ligase C terminal region J169_01483 PF01068 ATP dependent DNA ligase domain J169_01483 PF04675 DNA ligase N terminus J169_01486 PF00990 Diguanylate cyclase, GGDEF domain J169_01486 PF00072 Response regulator receiver domain J169_01489 PF02803 Thiolase, C-terminal domain J169_01489 PF00108 Thiolase, N-terminal domain J169_01490 PF12951 Passenger-associated-transport-repeat J169_01490 PF00082 Subtilase family J169_01490 PF03797 Autotransporter beta-domain J169_01491 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J169_01491 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J169_01493 PF01863 Protein of unknown function DUF45 J169_01494 PF07043 Protein of unknown function (DUF1328) J169_01496 PF01258 Prokaryotic dksA/traR C4-type zinc finger J169_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J169_01502 PF03831 PhnA domain J169_01502 PF08274 PhnA Zinc-Ribbon J169_01503 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J169_01504 PF07690 Major Facilitator Superfamily J169_01511 PF03706 Lysylphosphatidylglycerol synthase TM region J169_01511 PF09924 Uncharacterised conserved protein (DUF2156) J169_01514 PF01042 Endoribonuclease L-PSP J169_01523 PF04545 Sigma-70, region 4 J169_01523 PF04542 Sigma-70 region 2 J169_01526 PF04060 Putative Fe-S cluster J169_01528 PF01588 Putative tRNA binding domain J169_01528 PF09334 tRNA synthetases class I (M) J169_01531 PF13732 Domain of unknown function (DUF4162) J169_01531 PF00005 ABC transporter J169_01532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J169_01533 PF00324 Amino acid permease J169_01534 PF02574 Homocysteine S-methyltransferase J169_01536 PF02592 Putative vitamin uptake transporter J169_01540 PF03551 Transcriptional regulator PadR-like family J169_01547 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J169_01548 PF01336 OB-fold nucleic acid binding domain J169_01548 PF07733 Bacterial DNA polymerase III alpha NTPase domain J169_01548 PF02811 PHP domain J169_01548 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J169_01548 PF14579 Helix-hairpin-helix motif J169_01549 PF01351 Ribonuclease HII J169_01550 PF02684 Lipid-A-disaccharide synthetase J169_01551 PF00132 Bacterial transferase hexapeptide (six repeats) J169_01551 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J169_01552 PF07977 FabA-like domain J169_01553 PF00132 Bacterial transferase hexapeptide (six repeats) J169_01553 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J169_01555 PF07244 Surface antigen variable number repeat J169_01555 PF01103 Surface antigen J169_01556 PF17820 PDZ domain J169_01556 PF02163 Peptidase family M50 J169_01557 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J169_01557 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J169_01557 PF13288 DXP reductoisomerase C-terminal domain J169_01559 PF01255 Putative undecaprenyl diphosphate synthase J169_01560 PF01765 Ribosome recycling factor J169_01561 PF00696 Amino acid kinase family J169_01562 PF00990 Diguanylate cyclase, GGDEF domain J169_01562 PF00072 Response regulator receiver domain J169_01563 PF00889 Elongation factor TS J169_01564 PF00318 Ribosomal protein S2 J169_01571 PF00557 Metallopeptidase family M24 J169_01572 PF08335 GlnD PII-uridylyltransferase J169_01572 PF01966 HD domain J169_01572 PF01909 Nucleotidyltransferase domain J169_01573 PF14602 Hexapeptide repeat of succinyl-transferase J169_01573 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J169_01573 PF00132 Bacterial transferase hexapeptide (six repeats) J169_01574 PF03960 ArsC family J169_01575 PF01546 Peptidase family M20/M25/M40 J169_01575 PF07687 Peptidase dimerisation domain J169_01576 PF00733 Asparagine synthase J169_01576 PF13537 Glutamine amidotransferase domain J169_01578 PF07715 TonB-dependent Receptor Plug Domain J169_01578 PF00593 TonB dependent receptor J169_01580 PF01804 Penicillin amidase J169_01581 PF00210 Ferritin-like domain J169_01582 PF05724 Thiopurine S-methyltransferase (TPMT) J169_01584 PF00521 DNA gyrase/topoisomerase IV, subunit A J169_01584 PF03989 DNA gyrase C-terminal domain, beta-propeller J169_01587 PF02321 Outer membrane efflux protein J169_01588 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_01588 PF00529 HlyD membrane-fusion protein of T1SS J169_01589 PF07690 Major Facilitator Superfamily J169_01591 PF01915 Glycosyl hydrolase family 3 C-terminal domain J169_01591 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_01591 PF14310 Fibronectin type III-like domain J169_01593 PF00854 POT family J169_01598 PF12802 MarR family J169_01599 PF01432 Peptidase family M3 J169_01600 PF00255 Glutathione peroxidase J169_01601 PF00175 Oxidoreductase NAD-binding domain J169_01601 PF00970 Oxidoreductase FAD-binding domain J169_01602 PF00005 ABC transporter J169_01603 PF05683 Fumarase C-terminus J169_01603 PF05681 Fumarate hydratase (Fumerase) J169_01605 PF00484 Carbonic anhydrase J169_01606 PF02253 Phospholipase A1 J169_01608 PF00313 'Cold-shock' DNA-binding domain J169_01611 PF00899 ThiF family J169_01612 PF01026 TatD related DNase J169_01615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_01615 PF02770 Acyl-CoA dehydrogenase, middle domain J169_01615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_01617 PF00043 Glutathione S-transferase, C-terminal domain J169_01617 PF02798 Glutathione S-transferase, N-terminal domain J169_01618 PF13537 Glutamine amidotransferase domain J169_01618 PF00733 Asparagine synthase J169_01619 PF03358 NADPH-dependent FMN reductase J169_01620 PF00772 DnaB-like helicase N terminal domain J169_01620 PF03796 DnaB-like helicase C terminal domain J169_01621 PF00875 DNA photolyase J169_01621 PF03441 FAD binding domain of DNA photolyase J169_01622 PF00691 OmpA family J169_01622 PF05736 OprF membrane domain J169_01624 PF03466 LysR substrate binding domain J169_01624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01627 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_01627 PF00529 HlyD membrane-fusion protein of T1SS J169_01628 PF00873 AcrB/AcrD/AcrF family J169_01629 PF00106 short chain dehydrogenase J169_01630 PF02321 Outer membrane efflux protein J169_01631 PF00990 Diguanylate cyclase, GGDEF domain J169_01631 PF08448 PAS fold J169_01633 PF00990 Diguanylate cyclase, GGDEF domain J169_01650 PF01527 Transposase J169_01659 PF00082 Subtilase family J169_01660 PF01668 SmpB protein J169_01661 PF03364 Polyketide cyclase / dehydrase and lipid transport J169_01662 PF03658 RnfH family Ubiquitin J169_01663 PF04355 SmpA / OmlA family J169_01664 PF01475 Ferric uptake regulator family J169_01665 PF02463 RecF/RecN/SMC N terminal domain J169_01666 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J169_01666 PF01628 HrcA protein C terminal domain J169_01667 PF01025 GrpE J169_01668 PF00012 Hsp70 protein J169_01669 PF01556 DnaJ C terminal domain J169_01669 PF00226 DnaJ domain J169_01669 PF00684 DnaJ central domain J169_01671 PF08543 Phosphomethylpyrimidine kinase J169_01677 PF03412 Peptidase C39 family J169_01677 PF00005 ABC transporter J169_01677 PF00664 ABC transporter transmembrane region J169_01678 PF03466 LysR substrate binding domain J169_01678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01679 PF00005 ABC transporter J169_01679 PF00664 ABC transporter transmembrane region J169_01680 PF01205 Uncharacterized protein family UPF0029 J169_01681 PF03641 Possible lysine decarboxylase J169_01682 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_01682 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J169_01683 PF00364 Biotin-requiring enzyme J169_01683 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J169_01683 PF02817 e3 binding domain J169_01684 PF16870 2-oxoglutarate dehydrogenase C-terminal J169_01684 PF00676 Dehydrogenase E1 component J169_01684 PF16078 2-oxoglutarate dehydrogenase N-terminus J169_01684 PF02779 Transketolase, pyrimidine binding domain J169_01686 PF08007 Cupin superfamily protein J169_01688 PF00206 Lyase J169_01688 PF08328 Adenylosuccinate lyase C-terminal J169_01690 PF00571 CBS domain J169_01690 PF01595 Cyclin M transmembrane N-terminal domain J169_01690 PF03471 Transporter associated domain J169_01691 PF10415 Fumarase C C-terminus J169_01691 PF00206 Lyase J169_01696 PF00005 ABC transporter J169_01697 PF00392 Bacterial regulatory proteins, gntR family J169_01699 PF00255 Glutathione peroxidase J169_01700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J169_01700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J169_01701 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J169_01701 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J169_01701 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J169_01702 PF04102 SlyX J169_01705 PF00356 Bacterial regulatory proteins, lacI family J169_01706 PF07690 Major Facilitator Superfamily J169_01707 PF00294 pfkB family carbohydrate kinase J169_01709 PF02310 B12 binding domain J169_01709 PF02607 B12 binding domain J169_01709 PF02574 Homocysteine S-methyltransferase J169_01709 PF00809 Pterin binding enzyme J169_01709 PF02965 Vitamin B12 dependent methionine synthase, activation domain J169_01710 PF00809 Pterin binding enzyme J169_01710 PF02574 Homocysteine S-methyltransferase J169_01711 PF01209 ubiE/COQ5 methyltransferase family J169_01712 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_01712 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_01712 PF02770 Acyl-CoA dehydrogenase, middle domain J169_01715 PF08461 Ribonuclease R winged-helix domain J169_01715 PF08206 Ribonuclease B OB domain J169_01715 PF00773 RNB domain J169_01715 PF00575 S1 RNA binding domain J169_01715 PF17876 Cold shock domain J169_01717 PF08032 RNA 2'-O ribose methyltransferase substrate binding J169_01717 PF00588 SpoU rRNA Methylase family J169_01718 PF00990 Diguanylate cyclase, GGDEF domain J169_01718 PF07694 5TMR of 5TMR-LYT J169_01719 PF00929 Exonuclease J169_01721 PF01895 PhoU domain J169_01722 PF00005 ABC transporter J169_01723 PF00528 Binding-protein-dependent transport system inner membrane component J169_01724 PF00528 Binding-protein-dependent transport system inner membrane component J169_01725 PF12849 PBP superfamily domain J169_01726 PF12849 PBP superfamily domain J169_01729 PF00484 Carbonic anhydrase J169_01730 PF00916 Sulfate permease family J169_01730 PF01740 STAS domain J169_01731 PF10576 Iron-sulfur binding domain of endonuclease III J169_01731 PF00633 Helix-hairpin-helix motif J169_01731 PF00730 HhH-GPD superfamily base excision DNA repair protein J169_01733 PF00378 Enoyl-CoA hydratase/isomerase J169_01734 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J169_01734 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J169_01735 PF00293 NUDIX domain J169_01736 PF00581 Rhodanese-like domain J169_01743 PF02926 THUMP domain J169_01743 PF01170 Putative RNA methylase family UPF0020 J169_01743 PF10672 S-adenosylmethionine-dependent methyltransferase J169_01744 PF01513 ATP-NAD kinase J169_01748 PF08411 Exonuclease C-terminal J169_01748 PF00929 Exonuclease J169_01749 PF01494 FAD binding domain J169_01750 PF00266 Aminotransferase class-V J169_01752 PF06052 3-hydroxyanthranilic acid dioxygenase J169_01753 PF00484 Carbonic anhydrase J169_01762 PF00196 Bacterial regulatory proteins, luxR family J169_01762 PF00072 Response regulator receiver domain J169_01765 PF04299 Putative FMN-binding domain J169_01769 PF00152 tRNA synthetases class II (D, K and N) J169_01769 PF01336 OB-fold nucleic acid binding domain J169_01770 PF01521 Iron-sulphur cluster biosynthesis J169_01771 PF01250 Ribosomal protein S6 J169_01772 PF01084 Ribosomal protein S18 J169_01773 PF01281 Ribosomal protein L9, N-terminal domain J169_01773 PF03948 Ribosomal protein L9, C-terminal domain J169_01774 PF02463 RecF/RecN/SMC N terminal domain J169_01775 PF04354 ZipA, C-terminal FtsZ-binding domain J169_01777 PF00155 Aminotransferase class I and II J169_01778 PF00533 BRCA1 C Terminus (BRCT) domain J169_01778 PF01653 NAD-dependent DNA ligase adenylation domain J169_01778 PF03120 NAD-dependent DNA ligase OB-fold domain J169_01778 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J169_01778 PF12826 Helix-hairpin-helix motif J169_01779 PF00152 tRNA synthetases class II (D, K and N) J169_01781 PF01008 Initiation factor 2 subunit family J169_01782 PF00521 DNA gyrase/topoisomerase IV, subunit A J169_01782 PF03989 DNA gyrase C-terminal domain, beta-propeller J169_01783 PF13360 PQQ-like domain J169_01785 PF01175 Urocanase Rossmann-like domain J169_01785 PF17392 Urocanase C-terminal domain J169_01785 PF17391 Urocanase N-terminal domain J169_01787 PF00221 Aromatic amino acid lyase J169_01788 PF07969 Amidohydrolase family J169_01790 PF00392 Bacterial regulatory proteins, gntR family J169_01790 PF07702 UTRA domain J169_01796 PF01794 Ferric reductase like transmembrane component J169_01797 PF00174 Oxidoreductase molybdopterin binding domain J169_01798 PF00266 Aminotransferase class-V J169_01799 PF00800 Prephenate dehydratase J169_01799 PF01842 ACT domain J169_01799 PF01817 Chorismate mutase type II J169_01800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J169_01802 PF03544 Gram-negative bacterial TonB protein C-terminal J169_01803 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J169_01803 PF02403 Seryl-tRNA synthetase N-terminal domain J169_01804 PF02525 Flavodoxin-like fold J169_01805 PF03466 LysR substrate binding domain J169_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01810 PF01527 Transposase J169_01811 PF13276 HTH-like domain J169_01811 PF00665 Integrase core domain J169_01811 PF13333 Integrase core domain J169_01816 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_01816 PF00672 HAMP domain J169_01816 PF02203 Tar ligand binding domain homologue J169_01819 PF13188 PAS domain J169_01819 PF08448 PAS fold J169_01819 PF00512 His Kinase A (phospho-acceptor) domain J169_01819 PF00072 Response regulator receiver domain J169_01819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01820 PF00486 Transcriptional regulatory protein, C terminal J169_01820 PF00072 Response regulator receiver domain J169_01821 PF06745 KaiC J169_01822 PF13426 PAS domain J169_01822 PF00072 Response regulator receiver domain J169_01822 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01824 PF03918 Cytochrome C biogenesis protein J169_01825 PF08534 Redoxin J169_01826 PF01578 Cytochrome C assembly protein J169_01826 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J169_01827 PF03100 CcmE J169_01829 PF01578 Cytochrome C assembly protein J169_01830 PF00082 Subtilase family J169_01832 PF04542 Sigma-70 region 2 J169_01832 PF08281 Sigma-70, region 4 J169_01835 PF00034 Cytochrome c J169_01838 PF05523 WxcM-like, C-terminal J169_01842 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J169_01843 PF01943 Polysaccharide biosynthesis protein J169_01844 PF00535 Glycosyl transferase family 2 J169_01847 PF08241 Methyltransferase domain J169_01851 PF00534 Glycosyl transferases group 1 J169_01851 PF13579 Glycosyl transferase 4-like domain J169_01854 PF00005 ABC transporter J169_01855 PF00664 ABC transporter transmembrane region J169_01855 PF00005 ABC transporter J169_01856 PF07690 Major Facilitator Superfamily J169_01857 PF00296 Luciferase-like monooxygenase J169_01860 PF00571 CBS domain J169_01860 PF03471 Transporter associated domain J169_01860 PF01595 Cyclin M transmembrane N-terminal domain J169_01862 PF01384 Phosphate transporter family J169_01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_01865 PF00986 DNA gyrase B subunit, carboxyl terminus J169_01865 PF00204 DNA gyrase B J169_01865 PF01751 Toprim domain J169_01867 PF06418 CTP synthase N-terminus J169_01867 PF00117 Glutamine amidotransferase class-I J169_01868 PF00793 DAHP synthetase I family J169_01870 PF00113 Enolase, C-terminal TIM barrel domain J169_01870 PF03952 Enolase, N-terminal domain J169_01871 PF04977 Septum formation initiator J169_01872 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J169_01873 PF02542 YgbB family J169_01874 PF01142 tRNA pseudouridine synthase D (TruD) J169_01875 PF01713 Smr domain J169_01876 PF01975 Survival protein SurE J169_01878 PF09335 SNARE associated Golgi protein J169_01879 PF01476 LysM domain J169_01879 PF01551 Peptidase family M23 J169_01881 PF04430 Protein of unknown function (DUF498/DUF598) J169_01882 PF01985 CRS1 / YhbY (CRM) domain J169_01883 PF01728 FtsJ-like methyltransferase J169_01884 PF06480 FtsH Extracellular J169_01884 PF01434 Peptidase family M41 J169_01884 PF17862 AAA+ lid domain J169_01884 PF00004 ATPase family associated with various cellular activities (AAA) J169_01885 PF00809 Pterin binding enzyme J169_01887 PF17209 Hfq protein J169_01888 PF13167 GTP-binding GTPase N-terminal J169_01888 PF01926 50S ribosome-binding GTPase J169_01888 PF16360 GTP-binding GTPase Middle Region J169_01889 PF02464 Competence-damaged protein J169_01890 PF03109 ABC1 family J169_01891 PF00717 Peptidase S24-like J169_01891 PF01726 LexA DNA binding domain J169_01892 PF00154 recA bacterial DNA recombination protein J169_01893 PF02631 RecX family J169_01894 PF01411 tRNA synthetases class II (A) J169_01894 PF02272 DHHA1 domain J169_01894 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J169_01895 PF02599 Global regulator protein family J169_01897 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_01897 PF08447 PAS fold J169_01897 PF13426 PAS domain J169_01898 PF02678 Pirin J169_01898 PF17954 Quercetinase C-terminal cupin domain J169_01899 PF03466 LysR substrate binding domain J169_01899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01904 PF08543 Phosphomethylpyrimidine kinase J169_01904 PF02581 Thiamine monophosphate synthase J169_01907 PF02562 PhoH-like protein J169_01907 PF13638 PIN domain J169_01908 PF00578 AhpC/TSA family J169_01911 PF00701 Dihydrodipicolinate synthetase family J169_01913 PF11953 Domain of unknown function (DUF3470) J169_01913 PF00037 4Fe-4S binding domain J169_01914 PF05035 2-keto-3-deoxy-galactonokinase J169_01915 PF08450 SMP-30/Gluconolactonase/LRE-like region J169_01916 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J169_01916 PF13378 Enolase C-terminal domain-like J169_01917 PF01081 KDPG and KHG aldolase J169_01919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_01919 PF03466 LysR substrate binding domain J169_01922 PF00942 Cellulose binding domain J169_01922 PF03442 Carbohydrate binding domain X2 J169_01925 PF16338 Domain of unknown function (DUF4968) J169_01925 PF17137 Domain of unknown function (DUF5110) J169_01925 PF01055 Glycosyl hydrolases family 31 J169_01927 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J169_01927 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J169_01929 PF00083 Sugar (and other) transporter J169_01932 PF01520 N-acetylmuramoyl-L-alanine amidase J169_01933 PF02649 Type I GTP cyclohydrolase folE2 J169_01937 PF01743 Poly A polymerase head domain J169_01937 PF12626 Polymerase A arginine-rich C-terminus J169_01937 PF12627 Probable RNA and SrmB- binding site of polymerase A J169_01938 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J169_01939 PF02548 Ketopantoate hydroxymethyltransferase J169_01940 PF02569 Pantoate-beta-alanine ligase J169_01941 PF02261 Aspartate decarboxylase J169_01942 PF00342 Phosphoglucose isomerase J169_01946 PF14310 Fibronectin type III-like domain J169_01946 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_01946 PF01915 Glycosyl hydrolase family 3 C-terminal domain J169_01947 PF00474 Sodium:solute symporter family J169_01948 PF00360 Phytochrome region J169_01948 PF01590 GAF domain J169_01948 PF00563 EAL domain J169_01948 PF00990 Diguanylate cyclase, GGDEF domain J169_01949 PF02013 Cellulose or protein binding domain J169_01949 PF00150 Cellulase (glycosyl hydrolase family 5) J169_01950 PF00072 Response regulator receiver domain J169_01952 PF04551 GcpE protein J169_01953 PF01569 PAP2 superfamily J169_01954 PF07690 Major Facilitator Superfamily J169_01955 PF01177 Asp/Glu/Hydantoin racemase J169_01956 PF00892 EamA-like transporter family J169_01957 PF01565 FAD binding domain J169_01957 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J169_01958 PF01180 Dihydroorotate dehydrogenase J169_01961 PF00171 Aldehyde dehydrogenase family J169_01964 PF00535 Glycosyl transferase family 2 J169_01965 PF14883 Hypothetical glycosyl hydrolase family 13 J169_01965 PF01522 Polysaccharide deacetylase J169_01967 PF08479 POTRA domain, ShlB-type J169_01967 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J169_01967 PF17287 POTRA domain J169_01968 PF04829 Pre-toxin domain with VENN motif J169_01968 PF05594 Haemagluttinin repeat J169_01968 PF13332 Hemagglutinin repeat J169_01969 PF05594 Haemagluttinin repeat J169_01969 PF13332 Hemagglutinin repeat J169_01969 PF04829 Pre-toxin domain with VENN motif J169_01971 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J169_01971 PF13018 Extended Signal Peptide of Type V secretion system J169_01971 PF05860 haemagglutination activity domain J169_01971 PF05594 Haemagluttinin repeat J169_01971 PF13332 Hemagglutinin repeat J169_01973 PF03447 Homoserine dehydrogenase, NAD binding domain J169_01973 PF00696 Amino acid kinase family J169_01973 PF01842 ACT domain J169_01973 PF13840 ACT domain J169_01973 PF00742 Homoserine dehydrogenase J169_01974 PF08544 GHMP kinases C terminal J169_01974 PF00288 GHMP kinases N terminal domain J169_01976 PF14821 Threonine synthase N terminus J169_01976 PF00291 Pyridoxal-phosphate dependent enzyme J169_01978 PF13545 Crp-like helix-turn-helix domain J169_01978 PF00027 Cyclic nucleotide-binding domain J169_01979 PF13393 Histidyl-tRNA synthetase J169_01979 PF03129 Anticodon binding domain J169_01981 PF01634 ATP phosphoribosyltransferase J169_01981 PF08029 HisG, C-terminal domain J169_01982 PF00815 Histidinol dehydrogenase J169_01983 PF00155 Aminotransferase class I and II J169_01984 PF00475 Imidazoleglycerol-phosphate dehydratase J169_01985 PF00117 Glutamine amidotransferase class-I J169_01986 PF00977 Histidine biosynthesis protein J169_01987 PF00977 Histidine biosynthesis protein J169_01988 PF01502 Phosphoribosyl-AMP cyclohydrolase J169_01988 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J169_01992 PF03079 ARD/ARD' family J169_01993 PF00596 Class II Aldolase and Adducin N-terminal domain J169_01994 PF13520 Amino acid permease J169_01995 PF13520 Amino acid permease J169_01997 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J169_01997 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J169_01997 PF01842 ACT domain J169_01998 PF02913 FAD linked oxidases, C-terminal domain J169_01998 PF01565 FAD binding domain J169_02002 PF09285 Elongation factor P, C-terminal J169_02002 PF01132 Elongation factor P (EF-P) OB domain J169_02002 PF08207 Elongation factor P (EF-P) KOW-like domain J169_02003 PF00106 short chain dehydrogenase J169_02004 PF00682 HMGL-like J169_02006 PF00378 Enoyl-CoA hydratase/isomerase J169_02008 PF07664 Ferrous iron transport protein B C terminus J169_02008 PF07670 Nucleoside recognition J169_02008 PF02421 Ferrous iron transport protein B J169_02011 PF00155 Aminotransferase class I and II J169_02012 PF03475 3-alpha domain J169_02012 PF03473 MOSC domain J169_02013 PF05173 Dihydrodipicolinate reductase, C-terminus J169_02013 PF01113 Dihydrodipicolinate reductase, N-terminus J169_02014 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J169_02014 PF00117 Glutamine amidotransferase class-I J169_02016 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J169_02016 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J169_02016 PF02142 MGS-like domain J169_02017 PF03449 Transcription elongation factor, N-terminal J169_02017 PF01272 Transcription elongation factor, GreA/GreB, C-term J169_02019 PF17768 RecJ OB domain J169_02019 PF02272 DHHA1 domain J169_02019 PF01368 DHH family J169_02027 PF04397 LytTr DNA-binding domain J169_02027 PF00072 Response regulator receiver domain J169_02028 PF03462 PCRF domain J169_02028 PF00472 RF-1 domain J169_02029 PF00152 tRNA synthetases class II (D, K and N) J169_02029 PF01336 OB-fold nucleic acid binding domain J169_02030 PF00072 Response regulator receiver domain J169_02031 PF00072 Response regulator receiver domain J169_02031 PF01627 Hpt domain J169_02031 PF00512 His Kinase A (phospho-acceptor) domain J169_02031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02032 PF00378 Enoyl-CoA hydratase/isomerase J169_02033 PF13193 AMP-binding enzyme C-terminal domain J169_02033 PF00501 AMP-binding enzyme J169_02035 PF00330 Aconitase family (aconitate hydratase) J169_02035 PF00694 Aconitase C-terminal domain J169_02038 PF06434 Aconitate hydratase 2 N-terminus J169_02038 PF00330 Aconitase family (aconitate hydratase) J169_02038 PF11791 Aconitate B N-terminal domain J169_02039 PF00561 alpha/beta hydrolase fold J169_02040 PF03707 Bacterial signalling protein N terminal repeat J169_02040 PF00563 EAL domain J169_02040 PF00990 Diguanylate cyclase, GGDEF domain J169_02041 PF00072 Response regulator receiver domain J169_02041 PF01339 CheB methylesterase J169_02042 PF03975 CheD chemotactic sensory transduction J169_02043 PF03705 CheR methyltransferase, all-alpha domain J169_02043 PF01739 CheR methyltransferase, SAM binding domain J169_02044 PF02203 Tar ligand binding domain homologue J169_02044 PF00672 HAMP domain J169_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02045 PF00672 HAMP domain J169_02045 PF02203 Tar ligand binding domain homologue J169_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02046 PF00672 HAMP domain J169_02046 PF02203 Tar ligand binding domain homologue J169_02047 PF02203 Tar ligand binding domain homologue J169_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02047 PF00672 HAMP domain J169_02048 PF00672 HAMP domain J169_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02048 PF02203 Tar ligand binding domain homologue J169_02049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02049 PF00672 HAMP domain J169_02050 PF02203 Tar ligand binding domain homologue J169_02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02050 PF00672 HAMP domain J169_02052 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02052 PF02203 Tar ligand binding domain homologue J169_02052 PF00672 HAMP domain J169_02053 PF00672 HAMP domain J169_02053 PF17200 Single Cache domain 2 J169_02053 PF17200 Single Cache domain 2 J169_02053 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02053 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02053 PF00672 HAMP domain J169_02055 PF00672 HAMP domain J169_02055 PF02203 Tar ligand binding domain homologue J169_02055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02056 PF09078 CheY binding J169_02056 PF02895 Signal transducing histidine kinase, homodimeric domain J169_02056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02056 PF01627 Hpt domain J169_02056 PF01584 CheW-like domain J169_02057 PF00072 Response regulator receiver domain J169_02059 PF01584 CheW-like domain J169_02060 PF13614 AAA domain J169_02061 PF13677 Membrane MotB of proton-channel complex MotA/MotB J169_02061 PF00691 OmpA family J169_02062 PF01618 MotA/TolQ/ExbB proton channel family J169_02065 PF00069 Protein kinase domain J169_02065 PF03793 PASTA domain J169_02075 PF01527 Transposase J169_02081 PF04055 Radical SAM superfamily J169_02081 PF13186 Iron-sulfur cluster-binding domain J169_02084 PF07194 P2 response regulator binding domain J169_02084 PF01627 Hpt domain J169_02084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02084 PF02895 Signal transducing histidine kinase, homodimeric domain J169_02084 PF01584 CheW-like domain J169_02085 PF04344 Chemotaxis phosphatase, CheZ J169_02086 PF00072 Response regulator receiver domain J169_02087 PF04539 Sigma-70 region 3 J169_02087 PF04542 Sigma-70 region 2 J169_02087 PF04545 Sigma-70, region 4 J169_02088 PF10609 NUBPL iron-transfer P-loop NTPase J169_02089 PF00448 SRP54-type protein, GTPase domain J169_02090 PF00771 FHIPEP family J169_02091 PF01312 FlhB HrpN YscU SpaS Family J169_02092 PF00563 EAL domain J169_02092 PF00990 Diguanylate cyclase, GGDEF domain J169_02092 PF03707 Bacterial signalling protein N terminal repeat J169_02093 PF13188 PAS domain J169_02093 PF03707 Bacterial signalling protein N terminal repeat J169_02093 PF00990 Diguanylate cyclase, GGDEF domain J169_02093 PF00563 EAL domain J169_02094 PF13188 PAS domain J169_02094 PF00990 Diguanylate cyclase, GGDEF domain J169_02094 PF00563 EAL domain J169_02094 PF03707 Bacterial signalling protein N terminal repeat J169_02095 PF01311 Bacterial export proteins, family 1 J169_02096 PF01313 Bacterial export proteins, family 3 J169_02098 PF00813 FliP family J169_02099 PF04347 Flagellar biosynthesis protein, FliO J169_02100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J169_02101 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J169_02101 PF02154 Flagellar motor switch protein FliM J169_02105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J169_02105 PF18269 T3SS EscN ATPase C-terminal domain J169_02107 PF14842 FliG N-terminal domain J169_02107 PF01706 FliG C-terminal domain J169_02107 PF14841 FliG middle domain J169_02108 PF08345 Flagellar M-ring protein C-terminal J169_02108 PF01514 Secretory protein of YscJ/FliF family J169_02109 PF02049 Flagellar hook-basal body complex protein FliE J169_02110 PF00535 Glycosyl transferase family 2 J169_02110 PF00534 Glycosyl transferases group 1 J169_02118 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J169_02118 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J169_02120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J169_02121 PF02954 Bacterial regulatory protein, Fis family J169_02121 PF00072 Response regulator receiver domain J169_02121 PF00158 Sigma-54 interaction domain J169_02122 PF01339 CheB methylesterase J169_02122 PF00072 Response regulator receiver domain J169_02123 PF00309 Sigma-54 factor, Activator interacting domain (AID) J169_02123 PF04552 Sigma-54, DNA binding domain J169_02123 PF04963 Sigma-54 factor, core binding domain J169_02124 PF00196 Bacterial regulatory proteins, luxR family J169_02124 PF00072 Response regulator receiver domain J169_02127 PF02561 Flagellar protein FliS J169_02128 PF02465 Flagellar hook-associated protein 2 N-terminus J169_02128 PF07195 Flagellar hook-associated protein 2 C-terminus J169_02128 PF07196 Flagellin hook IN motif J169_02129 PF00669 Bacterial flagellin N-terminal helical region J169_02129 PF00700 Bacterial flagellin C-terminal helical region J169_02130 PF00669 Bacterial flagellin N-terminal helical region J169_02130 PF00700 Bacterial flagellin C-terminal helical region J169_02131 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J169_02131 PF07196 Flagellin hook IN motif J169_02132 PF10135 Rod binding protein J169_02132 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J169_02133 PF02119 Flagellar P-ring protein J169_02134 PF02107 Flagellar L-ring protein J169_02135 PF00460 Flagella basal body rod protein J169_02135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J169_02136 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J169_02136 PF00460 Flagella basal body rod protein J169_02137 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J169_02137 PF00460 Flagella basal body rod protein J169_02137 PF07559 Flagellar basal body protein FlaE J169_02138 PF03963 Flagellar hook capping protein - N-terminal region J169_02139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J169_02139 PF00460 Flagella basal body rod protein J169_02141 PF00072 Response regulator receiver domain J169_02141 PF01584 CheW-like domain J169_02145 PF13426 PAS domain J169_02145 PF00989 PAS fold J169_02145 PF00512 His Kinase A (phospho-acceptor) domain J169_02145 PF13188 PAS domain J169_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02146 PF00563 EAL domain J169_02146 PF00990 Diguanylate cyclase, GGDEF domain J169_02146 PF03707 Bacterial signalling protein N terminal repeat J169_02147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02147 PF07730 Histidine kinase J169_02148 PF03707 Bacterial signalling protein N terminal repeat J169_02148 PF00990 Diguanylate cyclase, GGDEF domain J169_02148 PF00563 EAL domain J169_02150 PF12729 Four helix bundle sensory module for signal transduction J169_02150 PF00672 HAMP domain J169_02150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02151 PF04356 Protein of unknown function (DUF489) J169_02153 PF00293 NUDIX domain J169_02154 PF02617 ATP-dependent Clp protease adaptor protein ClpS J169_02155 PF07724 AAA domain (Cdc48 subfamily) J169_02155 PF17871 AAA lid domain J169_02155 PF10431 C-terminal, D2-small domain, of ClpB protein J169_02155 PF00004 ATPase family associated with various cellular activities (AAA) J169_02155 PF02861 Clp amino terminal domain, pathogenicity island component J169_02156 PF01176 Translation initiation factor 1A / IF-1 J169_02157 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J169_02159 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_02160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J169_02160 PF17854 FtsK alpha domain J169_02160 PF01580 FtsK/SpoIIIE family J169_02160 PF09397 Ftsk gamma domain J169_02162 PF03548 Outer membrane lipoprotein carrier protein LolA J169_02164 PF16193 AAA C-terminal domain J169_02164 PF12002 MgsA AAA+ ATPase C terminal J169_02164 PF00004 ATPase family associated with various cellular activities (AAA) J169_02166 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J169_02168 PF00108 Thiolase, N-terminal domain J169_02168 PF02803 Thiolase, C-terminal domain J169_02169 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J169_02169 PF00378 Enoyl-CoA hydratase/isomerase J169_02169 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J169_02171 PF00334 Nucleoside diphosphate kinase J169_02172 PF04055 Radical SAM superfamily J169_02174 PF13464 Domain of unknown function (DUF4115) J169_02176 PF01011 PQQ enzyme repeat J169_02176 PF13360 PQQ-like domain J169_02177 PF01926 50S ribosome-binding GTPase J169_02177 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J169_02178 PF00994 Probable molybdopterin binding domain J169_02178 PF03454 MoeA C-terminal region (domain IV) J169_02178 PF03453 MoeA N-terminal region (domain I and II) J169_02179 PF00899 ThiF family J169_02184 PF08240 Alcohol dehydrogenase GroES-like domain J169_02184 PF13823 Alcohol dehydrogenase GroES-associated J169_02184 PF00107 Zinc-binding dehydrogenase J169_02186 PF03372 Endonuclease/Exonuclease/phosphatase family J169_02188 PF03454 MoeA C-terminal region (domain IV) J169_02188 PF03453 MoeA N-terminal region (domain I and II) J169_02188 PF00994 Probable molybdopterin binding domain J169_02189 PF12804 MobA-like NTP transferase domain J169_02191 PF00561 alpha/beta hydrolase fold J169_02192 PF01566 Natural resistance-associated macrophage protein J169_02193 PF02742 Iron dependent repressor, metal binding and dimerisation domain J169_02193 PF01325 Iron dependent repressor, N-terminal DNA binding domain J169_02194 PF14437 MafB19-like deaminase J169_02195 PF00929 Exonuclease J169_02196 PF05552 Conserved TM helix J169_02196 PF00924 Mechanosensitive ion channel J169_02197 PF00391 PEP-utilising enzyme, mobile domain J169_02197 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J169_02197 PF02896 PEP-utilising enzyme, TIM barrel domain J169_02198 PF03618 Kinase/pyrophosphorylase J169_02202 PF01066 CDP-alcohol phosphatidyltransferase J169_02204 PF00561 alpha/beta hydrolase fold J169_02207 PF01266 FAD dependent oxidoreductase J169_02207 PF00355 Rieske [2Fe-2S] domain J169_02209 PF00575 S1 RNA binding domain J169_02209 PF16921 Tex protein YqgF-like domain J169_02209 PF17674 HHH domain J169_02209 PF09371 Tex-like protein N-terminal domain J169_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02210 PF09308 LuxQ, periplasmic J169_02210 PF00072 Response regulator receiver domain J169_02210 PF00512 His Kinase A (phospho-acceptor) domain J169_02218 PF00034 Cytochrome c J169_02220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_02221 PF00873 AcrB/AcrD/AcrF family J169_02222 PF00873 AcrB/AcrD/AcrF family J169_02223 PF01081 KDPG and KHG aldolase J169_02224 PF00920 Dehydratase family J169_02225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J169_02226 PF02685 Glucokinase J169_02227 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J169_02227 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J169_02228 PF00005 ABC transporter J169_02228 PF17912 MalK OB fold domain J169_02231 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J169_02232 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J169_02233 PF00890 FAD binding domain J169_02233 PF02910 Fumarate reductase flavoprotein C-term J169_02235 PF13085 2Fe-2S iron-sulfur cluster binding domain J169_02236 PF03937 Flavinator of succinate dehydrogenase J169_02238 PF12704 MacB-like periplasmic core domain J169_02238 PF02687 FtsX-like permease family J169_02239 PF00005 ABC transporter J169_02241 PF00753 Metallo-beta-lactamase superfamily J169_02241 PF03772 Competence protein J169_02242 PF01618 MotA/TolQ/ExbB proton channel family J169_02244 PF00005 ABC transporter J169_02244 PF00664 ABC transporter transmembrane region J169_02245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J169_02246 PF02348 Cytidylyltransferase J169_02247 PF01451 Low molecular weight phosphotyrosine protein phosphatase J169_02249 PF08459 UvrC Helix-hairpin-helix N-terminal J169_02249 PF02151 UvrB/uvrC motif J169_02249 PF01541 GIY-YIG catalytic domain J169_02250 PF01066 CDP-alcohol phosphatidyltransferase J169_02254 PF00501 AMP-binding enzyme J169_02254 PF13193 AMP-binding enzyme C-terminal domain J169_02254 PF00550 Phosphopantetheine attachment site J169_02254 PF00668 Condensation domain J169_02255 PF00501 AMP-binding enzyme J169_02255 PF00668 Condensation domain J169_02255 PF00975 Thioesterase domain J169_02255 PF00550 Phosphopantetheine attachment site J169_02255 PF13193 AMP-binding enzyme C-terminal domain J169_02257 PF01527 Transposase J169_02259 PF01527 Transposase J169_02260 PF00589 Phage integrase family J169_02262 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J169_02262 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J169_02262 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J169_02264 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J169_02267 PF00196 Bacterial regulatory proteins, luxR family J169_02267 PF00072 Response regulator receiver domain J169_02268 PF00575 S1 RNA binding domain J169_02268 PF12111 Polyribonucleotide phosphorylase C terminal J169_02268 PF10150 Ribonuclease E/G family J169_02269 PF01479 S4 domain J169_02269 PF00849 RNA pseudouridylate synthase J169_02270 PF11737 Protein of unknown function (DUF3300) J169_02271 PF02535 ZIP Zinc transporter J169_02273 PF01329 Pterin 4 alpha carbinolamine dehydratase J169_02274 PF01106 NifU-like domain J169_02285 PF00106 short chain dehydrogenase J169_02290 PF01527 Transposase J169_02291 PF01494 FAD binding domain J169_02292 PF09335 SNARE associated Golgi protein J169_02294 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J169_02295 PF07995 Glucose / Sorbosone dehydrogenase J169_02297 PF00144 Beta-lactamase J169_02298 PF00072 Response regulator receiver domain J169_02298 PF04397 LytTr DNA-binding domain J169_02299 PF06580 Histidine kinase J169_02299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02299 PF07694 5TMR of 5TMR-LYT J169_02301 PF03797 Autotransporter beta-domain J169_02301 PF00082 Subtilase family J169_02302 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_02303 PF00873 AcrB/AcrD/AcrF family J169_02305 PF08448 PAS fold J169_02305 PF00072 Response regulator receiver domain J169_02305 PF13426 PAS domain J169_02305 PF00512 His Kinase A (phospho-acceptor) domain J169_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02306 PF00196 Bacterial regulatory proteins, luxR family J169_02306 PF00072 Response regulator receiver domain J169_02307 PF12951 Passenger-associated-transport-repeat J169_02307 PF12951 Passenger-associated-transport-repeat J169_02308 PF00990 Diguanylate cyclase, GGDEF domain J169_02308 PF08447 PAS fold J169_02308 PF08448 PAS fold J169_02308 PF00563 EAL domain J169_02311 PF05974 Domain of unknown function (DUF892) J169_02313 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J169_02315 PF10414 Sirohaem synthase dimerisation region J169_02315 PF14824 Sirohaem biosynthesis protein central J169_02315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J169_02318 PF05977 Transmembrane secretion effector J169_02319 PF07969 Amidohydrolase family J169_02321 PF00857 Isochorismatase family J169_02324 PF00196 Bacterial regulatory proteins, luxR family J169_02324 PF00072 Response regulator receiver domain J169_02327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_02327 PF03466 LysR substrate binding domain J169_02328 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J169_02328 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J169_02328 PF00361 Proton-conducting membrane transporter J169_02329 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J169_02331 PF01527 Transposase J169_02332 PF01381 Helix-turn-helix J169_02333 PF05284 Protein of unknown function (DUF736) J169_02334 PF04002 RadC-like JAB domain J169_02339 PF00589 Phage integrase family J169_02339 PF13356 Arm DNA-binding domain J169_02342 PF00593 TonB dependent receptor J169_02342 PF07715 TonB-dependent Receptor Plug Domain J169_02346 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J169_02351 PF00593 TonB dependent receptor J169_02351 PF07715 TonB-dependent Receptor Plug Domain J169_02354 PF10947 Protein of unknown function (DUF2628) J169_02356 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J169_02356 PF00722 Glycosyl hydrolases family 16 J169_02361 PF03412 Peptidase C39 family J169_02361 PF00664 ABC transporter transmembrane region J169_02361 PF00005 ABC transporter J169_02363 PF13614 AAA domain J169_02371 PF01751 Toprim domain J169_02371 PF01131 DNA topoisomerase J169_02372 PF01131 DNA topoisomerase J169_02372 PF01751 Toprim domain J169_02373 PF00145 C-5 cytosine-specific DNA methylase J169_02385 PF17761 DUF1016 N-terminal domain J169_02385 PF06250 YhcG PDDEXK nuclease domain J169_02386 PF01527 Transposase J169_02388 PF00892 EamA-like transporter family J169_02389 PF00892 EamA-like transporter family J169_02391 PF02525 Flavodoxin-like fold J169_02392 PF02798 Glutathione S-transferase, N-terminal domain J169_02392 PF00043 Glutathione S-transferase, C-terminal domain J169_02393 PF05544 Proline racemase J169_02394 PF03358 NADPH-dependent FMN reductase J169_02396 PF07690 Major Facilitator Superfamily J169_02397 PF02311 AraC-like ligand binding domain J169_02397 PF12833 Helix-turn-helix domain J169_02427 PF12462 DNA helicase IV / RNA helicase N terminal J169_02427 PF13361 UvrD-like helicase C-terminal domain J169_02427 PF00580 UvrD/REP helicase N-terminal domain J169_02442 PF03466 LysR substrate binding domain J169_02442 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_02443 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J169_02443 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J169_02444 PF03401 Tripartite tricarboxylate transporter family receptor J169_02448 PF04002 RadC-like JAB domain J169_02455 PF13356 Arm DNA-binding domain J169_02455 PF00589 Phage integrase family J169_02456 PF02540 NAD synthase J169_02456 PF00958 GMP synthase C terminal domain J169_02456 PF00117 Glutamine amidotransferase class-I J169_02457 PF00478 IMP dehydrogenase / GMP reductase domain J169_02457 PF00571 CBS domain J169_02458 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J169_02458 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J169_02460 PF02254 TrkA-N domain J169_02460 PF00999 Sodium/hydrogen exchanger family J169_02461 PF00483 Nucleotidyl transferase J169_02462 PF02719 Polysaccharide biosynthesis protein J169_02463 PF00953 Glycosyl transferase family 4 J169_02464 PF18073 Rubredoxin metal binding domain J169_02466 PF00216 Bacterial DNA-binding protein J169_02467 PF00575 S1 RNA binding domain J169_02468 PF02224 Cytidylate kinase J169_02469 PF00444 Ribosomal protein L36 J169_02472 PF04371 Porphyromonas-type peptidyl-arginine deiminase J169_02473 PF00795 Carbon-nitrogen hydrolase J169_02478 PF00528 Binding-protein-dependent transport system inner membrane component J169_02479 PF00528 Binding-protein-dependent transport system inner membrane component J169_02483 PF00356 Bacterial regulatory proteins, lacI family J169_02485 PF03795 YCII-related domain J169_02486 PF02616 Segregation and condensation protein ScpA J169_02487 PF04079 Segregation and condensation complex subunit ScpB J169_02488 PF00849 RNA pseudouridylate synthase J169_02488 PF01479 S4 domain J169_02491 PF00795 Carbon-nitrogen hydrolase J169_02492 PF00155 Aminotransferase class I and II J169_02493 PF00005 ABC transporter J169_02494 PF03379 CcmB protein J169_02495 PF01578 Cytochrome C assembly protein J169_02497 PF03100 CcmE J169_02498 PF01578 Cytochrome C assembly protein J169_02498 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J169_02499 PF08534 Redoxin J169_02500 PF03918 Cytochrome C biogenesis protein J169_02502 PF00561 alpha/beta hydrolase fold J169_02503 PF00313 'Cold-shock' DNA-binding domain J169_02504 PF00664 ABC transporter transmembrane region J169_02504 PF00005 ABC transporter J169_02505 PF00005 ABC transporter J169_02505 PF00664 ABC transporter transmembrane region J169_02506 PF01654 Cytochrome bd terminal oxidase subunit I J169_02507 PF02322 Cytochrome bd terminal oxidase subunit II J169_02511 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J169_02511 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J169_02512 PF00171 Aldehyde dehydrogenase family J169_02513 PF00696 Amino acid kinase family J169_02513 PF01472 PUA domain J169_02515 PF00206 Lyase J169_02516 PF01118 Semialdehyde dehydrogenase, NAD binding domain J169_02518 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J169_02518 PF00696 Amino acid kinase family J169_02521 PF00764 Arginosuccinate synthase J169_02522 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J169_02522 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J169_02524 PF01406 tRNA synthetases class I (C) catalytic domain J169_02524 PF09190 DALR domain J169_02525 PF02657 Fe-S metabolism associated domain J169_02527 PF01258 Prokaryotic dksA/traR C4-type zinc finger J169_02528 PF01809 Putative membrane protein insertion efficiency factor J169_02529 PF01979 Amidohydrolase family J169_02530 PF01551 Peptidase family M23 J169_02530 PF08460 Bacterial SH3 domain J169_02533 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J169_02534 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J169_02536 PF00753 Metallo-beta-lactamase superfamily J169_02540 PF01527 Transposase J169_02543 PF00295 Glycosyl hydrolases family 28 J169_02545 PF13419 Haloacid dehalogenase-like hydrolase J169_02547 PF01979 Amidohydrolase family J169_02549 PF09285 Elongation factor P, C-terminal J169_02549 PF08207 Elongation factor P (EF-P) KOW-like domain J169_02549 PF01132 Elongation factor P (EF-P) OB domain J169_02550 PF04055 Radical SAM superfamily J169_02551 PF13188 PAS domain J169_02551 PF03707 Bacterial signalling protein N terminal repeat J169_02551 PF00990 Diguanylate cyclase, GGDEF domain J169_02551 PF00563 EAL domain J169_02553 PF00588 SpoU rRNA Methylase family J169_02554 PF00459 Inositol monophosphatase family J169_02555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J169_02555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J169_02556 PF00545 ribonuclease J169_02559 PF00270 DEAD/DEAH box helicase J169_02559 PF00271 Helicase conserved C-terminal domain J169_02559 PF03880 DbpA RNA binding domain J169_02560 PF00156 Phosphoribosyl transferase domain J169_02561 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J169_02562 PF00135 Carboxylesterase family J169_02563 PF14497 Glutathione S-transferase, C-terminal domain J169_02563 PF02798 Glutathione S-transferase, N-terminal domain J169_02564 PF00313 'Cold-shock' DNA-binding domain J169_02565 PF07152 YaeQ protein J169_02567 PF00072 Response regulator receiver domain J169_02567 PF00990 Diguanylate cyclase, GGDEF domain J169_02567 PF00563 EAL domain J169_02568 PF01435 Peptidase family M48 J169_02569 PF00749 tRNA synthetases class I (E and Q), catalytic domain J169_02570 PF00106 short chain dehydrogenase J169_02571 PF05233 PHB accumulation regulatory domain J169_02571 PF07879 PHB/PHA accumulation regulator DNA-binding domain J169_02574 PF08676 MutL C terminal dimerisation domain J169_02574 PF01119 DNA mismatch repair protein, C-terminal domain J169_02575 PF11741 AMIN domain J169_02575 PF01520 N-acetylmuramoyl-L-alanine amidase J169_02576 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J169_02577 PF01256 Carbohydrate kinase J169_02577 PF03853 YjeF-related protein N-terminus J169_02578 PF08331 Domain of unknown function (DUF1730) J169_02579 PF13742 OB-fold nucleic acid binding domain J169_02579 PF02601 Exonuclease VII, large subunit J169_02581 PF03781 Sulfatase-modifying factor enzyme 1 J169_02582 PF01612 3'-5' exonuclease J169_02582 PF00570 HRDC domain J169_02584 PF13298 DNA polymerase Ligase (LigD) J169_02584 PF01068 ATP dependent DNA ligase domain J169_02584 PF04679 ATP dependent DNA ligase C terminal region J169_02588 PF00589 Phage integrase family J169_02592 PF05598 Transposase domain (DUF772) J169_02594 PF01527 Transposase J169_02598 PF00171 Aldehyde dehydrogenase family J169_02598 PF01619 Proline dehydrogenase J169_02598 PF14850 DNA-binding domain of Proline dehydrogenase J169_02598 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J169_02600 PF01527 Transposase J169_02602 PF00665 Integrase core domain J169_02602 PF13276 HTH-like domain J169_02602 PF13333 Integrase core domain J169_02604 PF00239 Resolvase, N terminal domain J169_02604 PF02796 Helix-turn-helix domain of resolvase J169_02607 PF02384 N-6 DNA Methylase J169_02608 PF09572 XamI restriction endonuclease J169_02620 PF01584 CheW-like domain J169_02621 PF00672 HAMP domain J169_02621 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_02621 PF12729 Four helix bundle sensory module for signal transduction J169_02622 PF02245 Methylpurine-DNA glycosylase (MPG) J169_02623 PF00270 DEAD/DEAH box helicase J169_02623 PF08494 DEAD/H associated J169_02623 PF00271 Helicase conserved C-terminal domain J169_02626 PF04386 Stringent starvation protein B J169_02627 PF02798 Glutathione S-transferase, N-terminal domain J169_02627 PF00043 Glutathione S-transferase, C-terminal domain J169_02628 PF02167 Cytochrome C1 family J169_02629 PF00033 Cytochrome b/b6/petB J169_02629 PF00032 Cytochrome b(C-terminal)/b6/petD J169_02630 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J169_02630 PF00355 Rieske [2Fe-2S] domain J169_02631 PF01464 Transglycosylase SLT domain J169_02634 PF04055 Radical SAM superfamily J169_02634 PF01938 TRAM domain J169_02634 PF00919 Uncharacterized protein family UPF0004 J169_02635 PF02562 PhoH-like protein J169_02637 PF02130 Uncharacterized protein family UPF0054 J169_02639 PF00571 CBS domain J169_02639 PF03471 Transporter associated domain J169_02642 PF00171 Aldehyde dehydrogenase family J169_02643 PF00528 Binding-protein-dependent transport system inner membrane component J169_02644 PF00528 Binding-protein-dependent transport system inner membrane component J169_02645 PF08402 TOBE domain J169_02645 PF00005 ABC transporter J169_02646 PF02321 Outer membrane efflux protein J169_02647 PF07690 Major Facilitator Superfamily J169_02648 PF13533 Biotin-lipoyl like J169_02649 PF13416 Bacterial extracellular solute-binding protein J169_02650 PF00202 Aminotransferase class-III J169_02651 PF00120 Glutamine synthetase, catalytic domain J169_02652 PF07722 Peptidase C26 J169_02653 PF00120 Glutamine synthetase, catalytic domain J169_02654 PF01266 FAD dependent oxidoreductase J169_02655 PF00990 Diguanylate cyclase, GGDEF domain J169_02655 PF00072 Response regulator receiver domain J169_02656 PF01814 Hemerythrin HHE cation binding domain J169_02657 PF00083 Sugar (and other) transporter J169_02657 PF07690 Major Facilitator Superfamily J169_02659 PF00384 Molybdopterin oxidoreductase J169_02660 PF02634 FdhD/NarQ family J169_02661 PF07690 Major Facilitator Superfamily J169_02662 PF00202 Aminotransferase class-III J169_02664 PF04286 Protein of unknown function (DUF445) J169_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J169_02665 PF01627 Hpt domain J169_02665 PF00072 Response regulator receiver domain J169_02665 PF00512 His Kinase A (phospho-acceptor) domain J169_02665 PF00672 HAMP domain J169_02666 PF00072 Response regulator receiver domain J169_02667 PF07690 Major Facilitator Superfamily J169_02668 PF05088 Bacterial NAD-glutamate dehydrogenase J169_02670 PF00529 HlyD membrane-fusion protein of T1SS J169_02670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_02671 PF00873 AcrB/AcrD/AcrF family J169_02672 PF00356 Bacterial regulatory proteins, lacI family J169_02673 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J169_02673 PF00381 PTS HPr component phosphorylation site J169_02673 PF02896 PEP-utilising enzyme, TIM barrel domain J169_02673 PF00391 PEP-utilising enzyme, mobile domain J169_02673 PF05524 PEP-utilising enzyme, N-terminal J169_02674 PF00294 pfkB family carbohydrate kinase J169_02675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J169_02683 PF07549 SecD/SecF GG Motif J169_02683 PF02355 Protein export membrane protein J169_02684 PF02355 Protein export membrane protein J169_02684 PF07549 SecD/SecF GG Motif J169_02684 PF13721 SecD export protein N-terminal TM region J169_02685 PF02699 Preprotein translocase subunit J169_02686 PF01702 Queuine tRNA-ribosyltransferase J169_02687 PF02547 Queuosine biosynthesis protein J169_02696 PF02927 Cellulase N-terminal ig-like domain J169_02696 PF00759 Glycosyl hydrolase family 9 J169_02698 PF00037 4Fe-4S binding domain J169_02701 PF01467 Cytidylyltransferase-like J169_02703 PF00183 Hsp90 protein J169_02703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02707 PF00593 TonB dependent receptor J169_02707 PF07715 TonB-dependent Receptor Plug Domain J169_02709 PF04616 Glycosyl hydrolases family 43 J169_02710 PF07532 Bacterial Ig-like domain (group 4) J169_02711 PF00593 TonB dependent receptor J169_02711 PF07715 TonB-dependent Receptor Plug Domain J169_02713 PF09286 Pro-kumamolisin, activation domain J169_02713 PF00082 Subtilase family J169_02719 PF13520 Amino acid permease J169_02722 PF01321 Creatinase/Prolidase N-terminal domain J169_02722 PF00557 Metallopeptidase family M24 J169_02723 PF00171 Aldehyde dehydrogenase family J169_02724 PF00701 Dihydrodipicolinate synthetase family J169_02725 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_02725 PF04324 BFD-like [2Fe-2S] binding domain J169_02727 PF01266 FAD dependent oxidoreductase J169_02728 PF05544 Proline racemase J169_02730 PF02881 SRP54-type protein, helical bundle domain J169_02730 PF00448 SRP54-type protein, GTPase domain J169_02731 PF14815 NUDIX domain J169_02731 PF00730 HhH-GPD superfamily base excision DNA repair protein J169_02731 PF10576 Iron-sulfur binding domain of endonuclease III J169_02731 PF00633 Helix-hairpin-helix motif J169_02732 PF04362 Bacterial Fe(2+) trafficking J169_02733 PF00072 Response regulator receiver domain J169_02733 PF13426 PAS domain J169_02733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02739 PF08212 Lipocalin-like domain J169_02741 PF12806 Acetyl-CoA dehydrogenase C-terminal like J169_02741 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_02741 PF02770 Acyl-CoA dehydrogenase, middle domain J169_02741 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_02743 PF02779 Transketolase, pyrimidine binding domain J169_02743 PF02780 Transketolase, C-terminal domain J169_02743 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J169_02747 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J169_02748 PF16123 Hydroxyacylglutathione hydrolase C-terminus J169_02748 PF00753 Metallo-beta-lactamase superfamily J169_02749 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J169_02749 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J169_02752 PF03808 Glycosyl transferase WecB/TagA/CpsF family J169_02755 PF14667 Polysaccharide biosynthesis C-terminal domain J169_02757 PF13439 Glycosyltransferase Family 4 J169_02757 PF00534 Glycosyl transferases group 1 J169_02761 PF02397 Bacterial sugar transferase J169_02765 PF13411 MerR HTH family regulatory protein J169_02766 PF00216 Bacterial DNA-binding protein J169_02767 PF03147 Ferredoxin-fold anticodon binding domain J169_02767 PF03484 tRNA synthetase B5 domain J169_02767 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J169_02767 PF03483 B3/4 domain J169_02767 PF01588 Putative tRNA binding domain J169_02768 PF01409 tRNA synthetases class II core domain (F) J169_02768 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J169_02769 PF00453 Ribosomal protein L20 J169_02770 PF01632 Ribosomal protein L35 J169_02772 PF00707 Translation initiation factor IF-3, C-terminal domain J169_02772 PF05198 Translation initiation factor IF-3, N-terminal domain J169_02773 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J169_02773 PF03129 Anticodon binding domain J169_02773 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J169_02773 PF02824 TGS domain J169_02774 PF00356 Bacterial regulatory proteins, lacI family J169_02775 PF00128 Alpha amylase, catalytic domain J169_02775 PF00686 Starch binding domain J169_02776 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J169_02778 PF14508 Glycosyl-hydrolase 97 N-terminal J169_02778 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J169_02778 PF10566 Glycoside hydrolase 97 J169_02782 PF00128 Alpha amylase, catalytic domain J169_02784 PF01527 Transposase J169_02793 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J169_02796 PF01464 Transglycosylase SLT domain J169_02797 PF00437 Type II/IV secretion system protein J169_02798 PF03743 Bacterial conjugation TrbI-like protein J169_02802 PF02534 Type IV secretory system Conjugative DNA transfer J169_02805 PF17757 UvrB interaction domain J169_02805 PF12344 Ultra-violet resistance protein B J169_02805 PF02151 UvrB/uvrC motif J169_02805 PF04851 Type III restriction enzyme, res subunit J169_02805 PF00271 Helicase conserved C-terminal domain J169_02814 PF01527 Transposase J169_02823 PF01555 DNA methylase J169_02833 PF00182 Chitinase class I J169_02844 PF01527 Transposase J169_02845 PF00114 Pilin (bacterial filament) J169_02845 PF07963 Prokaryotic N-terminal methylation motif J169_02846 PF05567 Neisseria PilC beta-propeller domain J169_02849 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02849 PF06580 Histidine kinase J169_02849 PF07694 5TMR of 5TMR-LYT J169_02850 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J169_02850 PF11892 Domain of unknown function (DUF3412) J169_02850 PF03641 Possible lysine decarboxylase J169_02851 PF00593 TonB dependent receptor J169_02852 PF01914 MarC family integral membrane protein J169_02854 PF00462 Glutaredoxin J169_02855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J169_02855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J169_02856 PF02222 ATP-grasp domain J169_02856 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J169_02857 PF00731 AIR carboxylase J169_02859 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J169_02859 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J169_02861 PF01138 3' exoribonuclease family, domain 1 J169_02861 PF00575 S1 RNA binding domain J169_02861 PF00013 KH domain J169_02861 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J169_02861 PF03725 3' exoribonuclease family, domain 2 J169_02862 PF00312 Ribosomal protein S15 J169_02863 PF09157 Pseudouridine synthase II TruB, C-terminal J169_02863 PF16198 tRNA pseudouridylate synthase B C-terminal domain J169_02863 PF01509 TruB family pseudouridylate synthase (N terminal domain) J169_02864 PF02033 Ribosome-binding factor A J169_02865 PF08364 Bacterial translation initiation factor IF-2 associated region J169_02865 PF11987 Translation-initiation factor 2 J169_02865 PF00009 Elongation factor Tu GTP binding domain J169_02865 PF04760 Translation initiation factor IF-2, N-terminal region J169_02866 PF13184 NusA-like KH domain J169_02866 PF00575 S1 RNA binding domain J169_02866 PF08529 NusA N-terminal domain J169_02867 PF17384 RimP C-terminal SH3 domain J169_02867 PF02576 RimP N-terminal domain J169_02869 PF00361 Proton-conducting membrane transporter J169_02870 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J169_02870 PF00361 Proton-conducting membrane transporter J169_02871 PF00361 Proton-conducting membrane transporter J169_02871 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J169_02872 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J169_02873 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J169_02874 PF12838 4Fe-4S dicluster domain J169_02875 PF00146 NADH dehydrogenase J169_02876 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J169_02876 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J169_02876 PF00384 Molybdopterin oxidoreductase J169_02877 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J169_02877 PF10531 SLBB domain J169_02877 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J169_02879 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J169_02880 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J169_02881 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J169_02882 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J169_02885 PF00121 Triosephosphate isomerase J169_02886 PF00106 short chain dehydrogenase J169_02889 PF03707 Bacterial signalling protein N terminal repeat J169_02889 PF00563 EAL domain J169_02889 PF00990 Diguanylate cyclase, GGDEF domain J169_02892 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J169_02892 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J169_02892 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J169_02892 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J169_02893 PF01039 Carboxyl transferase domain J169_02893 PF17848 Acetyl-coA carboxylase zinc finger domain J169_02894 PF00290 Tryptophan synthase alpha chain J169_02896 PF00291 Pyridoxal-phosphate dependent enzyme J169_02897 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_02897 PF03466 LysR substrate binding domain J169_02898 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J169_02899 PF01416 tRNA pseudouridine synthase J169_02903 PF01118 Semialdehyde dehydrogenase, NAD binding domain J169_02903 PF02774 Semialdehyde dehydrogenase, dimerisation domain J169_02904 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J169_02904 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J169_02905 PF01264 Chorismate synthase J169_02906 PF05175 Methyltransferase small domain J169_02907 PF02630 SCO1/SenC J169_02908 PF02666 Phosphatidylserine decarboxylase J169_02910 PF05872 Bacterial protein of unknown function (DUF853) J169_02911 PF00293 NUDIX domain J169_02914 PF03449 Transcription elongation factor, N-terminal J169_02914 PF01272 Transcription elongation factor, GreA/GreB, C-term J169_02915 PF04055 Radical SAM superfamily J169_02915 PF18693 TRAM domain J169_02915 PF00919 Uncharacterized protein family UPF0004 J169_02916 PF01738 Dienelactone hydrolase family J169_02920 PF00692 dUTPase J169_02921 PF10609 NUBPL iron-transfer P-loop NTPase J169_02922 PF07715 TonB-dependent Receptor Plug Domain J169_02922 PF00593 TonB dependent receptor J169_02925 PF05649 Peptidase family M13 J169_02925 PF01431 Peptidase family M13 J169_02926 PF05649 Peptidase family M13 J169_02926 PF01431 Peptidase family M13 J169_02929 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J169_02930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J169_02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_02931 PF01266 FAD dependent oxidoreductase J169_02932 PF04235 Protein of unknown function (DUF418) J169_02933 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J169_02934 PF00877 NlpC/P60 family J169_02935 PF00877 NlpC/P60 family J169_02938 PF00375 Sodium:dicarboxylate symporter family J169_02939 PF00245 Alkaline phosphatase J169_02940 PF01171 PP-loop family J169_02940 PF09179 TilS substrate binding domain J169_02940 PF11734 TilS substrate C-terminal domain J169_02941 PF02609 Exonuclease VII small subunit J169_02942 PF00348 Polyprenyl synthetase J169_02943 PF14521 Lysine-specific metallo-endopeptidase J169_02945 PF01523 Putative modulator of DNA gyrase J169_02946 PF04751 Protein of unknown function (DUF615) J169_02947 PF01523 Putative modulator of DNA gyrase J169_02949 PF13116 Protein of unknown function J169_02949 PF13502 AsmA-like C-terminal region J169_02950 PF10150 Ribonuclease E/G family J169_02950 PF00575 S1 RNA binding domain J169_02951 PF02545 Maf-like protein J169_02952 PF04402 Protein of unknown function (DUF541) J169_02955 PF02590 Predicted SPOUT methyltransferase J169_02958 PF01467 Cytidylyltransferase-like J169_02961 PF00133 tRNA synthetases class I (I, L, M and V) J169_02961 PF13603 Leucyl-tRNA synthetase, Domain 2 J169_02961 PF08264 Anticodon-binding domain of tRNA J169_02963 PF00085 Thioredoxin J169_02968 PF04070 Domain of unknown function (DUF378) J169_02969 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J169_02971 PF03466 LysR substrate binding domain J169_02971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_02976 PF00005 ABC transporter J169_02976 PF00664 ABC transporter transmembrane region J169_02979 PF00873 AcrB/AcrD/AcrF family J169_02982 PF02321 Outer membrane efflux protein J169_02983 PF00072 Response regulator receiver domain J169_02983 PF00486 Transcriptional regulatory protein, C terminal J169_02984 PF00512 His Kinase A (phospho-acceptor) domain J169_02984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_02984 PF00672 HAMP domain J169_02985 PF00999 Sodium/hydrogen exchanger family J169_02986 PF00144 Beta-lactamase J169_02987 PF03737 Aldolase/RraA J169_02990 PF00990 Diguanylate cyclase, GGDEF domain J169_02990 PF00072 Response regulator receiver domain J169_02991 PF01479 S4 domain J169_02991 PF00849 RNA pseudouridylate synthase J169_02992 PF00990 Diguanylate cyclase, GGDEF domain J169_02992 PF08448 PAS fold J169_02992 PF00563 EAL domain J169_02993 PF03880 DbpA RNA binding domain J169_02993 PF00270 DEAD/DEAH box helicase J169_02993 PF00271 Helicase conserved C-terminal domain J169_03003 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J169_03003 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J169_03005 PF00654 Voltage gated chloride channel J169_03006 PF00107 Zinc-binding dehydrogenase J169_03006 PF08240 Alcohol dehydrogenase GroES-like domain J169_03009 PF00593 TonB dependent receptor J169_03009 PF07715 TonB-dependent Receptor Plug Domain J169_03011 PF00082 Subtilase family J169_03011 PF01483 Proprotein convertase P-domain J169_03014 PF00082 Subtilase family J169_03014 PF01483 Proprotein convertase P-domain J169_03016 PF00248 Aldo/keto reductase family J169_03017 PF07690 Major Facilitator Superfamily J169_03018 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03018 PF03466 LysR substrate binding domain J169_03020 PF06719 AraC-type transcriptional regulator N-terminus J169_03020 PF12833 Helix-turn-helix domain J169_03022 PF00440 Bacterial regulatory proteins, tetR family J169_03022 PF16859 Tetracyclin repressor-like, C-terminal domain J169_03023 PF02321 Outer membrane efflux protein J169_03024 PF00873 AcrB/AcrD/AcrF family J169_03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_03025 PF00529 HlyD membrane-fusion protein of T1SS J169_03027 PF01475 Ferric uptake regulator family J169_03028 PF00749 tRNA synthetases class I (E and Q), catalytic domain J169_03033 PF06123 Inner membrane protein CreD J169_03035 PF00512 His Kinase A (phospho-acceptor) domain J169_03035 PF00672 HAMP domain J169_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03036 PF00486 Transcriptional regulatory protein, C terminal J169_03036 PF00072 Response regulator receiver domain J169_03037 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J169_03039 PF03461 TRCF domain J169_03039 PF02559 CarD-like/TRCF domain J169_03039 PF17757 UvrB interaction domain J169_03039 PF00270 DEAD/DEAH box helicase J169_03039 PF00271 Helicase conserved C-terminal domain J169_03046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03046 PF01584 CheW-like domain J169_03046 PF09078 CheY binding J169_03046 PF01627 Hpt domain J169_03046 PF02895 Signal transducing histidine kinase, homodimeric domain J169_03047 PF00672 HAMP domain J169_03047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03047 PF02203 Tar ligand binding domain homologue J169_03048 PF01584 CheW-like domain J169_03049 PF13426 PAS domain J169_03049 PF00563 EAL domain J169_03049 PF00990 Diguanylate cyclase, GGDEF domain J169_03050 PF03705 CheR methyltransferase, all-alpha domain J169_03050 PF01739 CheR methyltransferase, SAM binding domain J169_03051 PF00072 Response regulator receiver domain J169_03051 PF01339 CheB methylesterase J169_03052 PF13091 PLD-like domain J169_03053 PF01431 Peptidase family M13 J169_03053 PF05649 Peptidase family M13 J169_03055 PF00300 Histidine phosphatase superfamily (branch 1) J169_03056 PF04493 Endonuclease V J169_03058 PF02678 Pirin J169_03058 PF05726 Pirin C-terminal cupin domain J169_03061 PF05726 Pirin C-terminal cupin domain J169_03061 PF02678 Pirin J169_03062 PF02554 Carbon starvation protein CstA J169_03062 PF13722 5TM C-terminal transporter carbon starvation CstA J169_03063 PF04328 Selenoprotein, putative J169_03072 PF01527 Transposase J169_03074 PF02625 XdhC and CoxI family J169_03074 PF13478 XdhC Rossmann domain J169_03075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J169_03075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J169_03076 PF03450 CO dehydrogenase flavoprotein C-terminal domain J169_03076 PF00941 FAD binding domain in molybdopterin dehydrogenase J169_03077 PF10518 TAT (twin-arginine translocation) pathway signal sequence J169_03077 PF00111 2Fe-2S iron-sulfur cluster binding domain J169_03077 PF01799 [2Fe-2S] binding domain J169_03078 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_03078 PF14765 Polyketide synthase dehydratase J169_03078 PF09277 Erythronolide synthase, docking J169_03078 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_03078 PF08990 Erythronolide synthase docking J169_03078 PF08659 KR domain J169_03078 PF08240 Alcohol dehydrogenase GroES-like domain J169_03078 PF16197 Ketoacyl-synthetase C-terminal extension J169_03078 PF00698 Acyl transferase domain J169_03078 PF00550 Phosphopantetheine attachment site J169_03079 PF00563 EAL domain J169_03079 PF00990 Diguanylate cyclase, GGDEF domain J169_03079 PF01590 GAF domain J169_03079 PF00360 Phytochrome region J169_03082 PF12161 HsdM N-terminal domain J169_03082 PF02384 N-6 DNA Methylase J169_03088 PF00436 Single-strand binding protein family J169_03089 PF00348 Polyprenyl synthetase J169_03091 PF02875 Mur ligase family, glutamate ligase domain J169_03091 PF08245 Mur ligase middle domain J169_03094 PF01842 ACT domain J169_03094 PF00696 Amino acid kinase family J169_03095 PF02567 Phenazine biosynthesis-like protein J169_03096 PF02567 Phenazine biosynthesis-like protein J169_03098 PF02566 OsmC-like protein J169_03099 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J169_03099 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J169_03100 PF03652 Holliday junction resolvase J169_03101 PF02622 Uncharacterized ACR, COG1678 J169_03102 PF03352 Methyladenine glycosylase J169_03102 PF13673 Acetyltransferase (GNAT) domain J169_03102 PF00117 Glutamine amidotransferase class-I J169_03102 PF13302 Acetyltransferase (GNAT) domain J169_03102 PF00958 GMP synthase C terminal domain J169_03105 PF03211 Pectate lyase J169_03106 PF00437 Type II/IV secretion system protein J169_03107 PF00437 Type II/IV secretion system protein J169_03108 PF01168 Alanine racemase, N-terminal domain J169_03109 PF14748 Pyrroline-5-carboxylate reductase dimerisation J169_03109 PF03807 NADP oxidoreductase coenzyme F420-dependent J169_03111 PF01551 Peptidase family M23 J169_03115 PF01965 DJ-1/PfpI family J169_03117 PF02082 Transcriptional regulator J169_03118 PF01458 Uncharacterized protein family (UPF0051) J169_03119 PF00005 ABC transporter J169_03120 PF01458 Uncharacterized protein family (UPF0051) J169_03121 PF00266 Aminotransferase class-V J169_03123 PF00355 Rieske [2Fe-2S] domain J169_03124 PF07715 TonB-dependent Receptor Plug Domain J169_03124 PF00593 TonB dependent receptor J169_03125 PF13640 2OG-Fe(II) oxygenase superfamily J169_03125 PF18331 PKHD-type hydroxylase C-terminal domain J169_03130 PF02424 ApbE family J169_03131 PF00175 Oxidoreductase NAD-binding domain J169_03131 PF00258 Flavodoxin J169_03131 PF00667 FAD binding domain J169_03135 PF07687 Peptidase dimerisation domain J169_03135 PF01546 Peptidase family M20/M25/M40 J169_03137 PF01636 Phosphotransferase enzyme family J169_03138 PF00483 Nucleotidyl transferase J169_03139 PF00308 Bacterial dnaA protein J169_03140 PF01594 AI-2E family transporter J169_03142 PF02769 AIR synthase related protein, C-terminal domain J169_03142 PF00586 AIR synthase related protein, N-terminal domain J169_03144 PF00551 Formyl transferase J169_03148 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J169_03149 PF01722 BolA-like protein J169_03150 PF01380 SIS domain J169_03150 PF00571 CBS domain J169_03153 PF03968 OstA-like protein J169_03154 PF00005 ABC transporter J169_03155 PF00309 Sigma-54 factor, Activator interacting domain (AID) J169_03155 PF04552 Sigma-54, DNA binding domain J169_03155 PF04963 Sigma-54 factor, core binding domain J169_03156 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J169_03157 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J169_03158 PF02603 HPr Serine kinase N terminus J169_03158 PF07475 HPr Serine kinase C-terminal domain J169_03159 PF03668 P-loop ATPase protein family J169_03161 PF00381 PTS HPr component phosphorylation site J169_03162 PF05524 PEP-utilising enzyme, N-terminal J169_03162 PF02896 PEP-utilising enzyme, TIM barrel domain J169_03162 PF00391 PEP-utilising enzyme, mobile domain J169_03163 PF01769 Divalent cation transporter J169_03163 PF00571 CBS domain J169_03163 PF03448 MgtE intracellular N domain J169_03164 PF00756 Putative esterase J169_03165 PF02322 Cytochrome bd terminal oxidase subunit II J169_03166 PF01654 Cytochrome bd terminal oxidase subunit I J169_03168 PF00324 Amino acid permease J169_03169 PF00544 Pectate lyase J169_03170 PF00561 alpha/beta hydrolase fold J169_03171 PF00196 Bacterial regulatory proteins, luxR family J169_03172 PF00324 Amino acid permease J169_03177 PF12706 Beta-lactamase superfamily domain J169_03178 PF04820 Tryptophan halogenase J169_03183 PF00376 MerR family regulatory protein J169_03183 PF09278 MerR, DNA binding J169_03184 PF07690 Major Facilitator Superfamily J169_03186 PF03738 Glutathionylspermidine synthase preATP-grasp J169_03191 PF04012 PspA/IM30 family J169_03193 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J169_03193 PF01243 Pyridoxamine 5'-phosphate oxidase J169_03194 PF01202 Shikimate kinase J169_03195 PF01761 3-dehydroquinate synthase J169_03197 PF01208 Uroporphyrinogen decarboxylase (URO-D) J169_03210 PF00158 Sigma-54 interaction domain J169_03210 PF02954 Bacterial regulatory protein, Fis family J169_03210 PF01590 GAF domain J169_03211 PF07690 Major Facilitator Superfamily J169_03212 PF01627 Hpt domain J169_03212 PF00072 Response regulator receiver domain J169_03212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03212 PF00672 HAMP domain J169_03212 PF17149 Periplasmic sensor domain found in signal transduction proteins J169_03212 PF00512 His Kinase A (phospho-acceptor) domain J169_03213 PF00512 His Kinase A (phospho-acceptor) domain J169_03213 PF17149 Periplasmic sensor domain found in signal transduction proteins J169_03213 PF00672 HAMP domain J169_03213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03213 PF00072 Response regulator receiver domain J169_03213 PF01627 Hpt domain J169_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03215 PF00512 His Kinase A (phospho-acceptor) domain J169_03215 PF01627 Hpt domain J169_03215 PF00072 Response regulator receiver domain J169_03216 PF04264 YceI-like domain J169_03220 PF03313 Serine dehydratase alpha chain J169_03220 PF03315 Serine dehydratase beta chain J169_03221 PF12697 Alpha/beta hydrolase family J169_03222 PF00742 Homoserine dehydrogenase J169_03222 PF00696 Amino acid kinase family J169_03222 PF03447 Homoserine dehydrogenase, NAD binding domain J169_03223 PF01053 Cys/Met metabolism PLP-dependent enzyme J169_03224 PF00561 alpha/beta hydrolase fold J169_03226 PF01476 LysM domain J169_03226 PF08525 Opacity-associated protein A N-terminal motif J169_03226 PF01551 Peptidase family M23 J169_03227 PF16658 Class II release factor RF3, C-terminal domain J169_03227 PF00009 Elongation factor Tu GTP binding domain J169_03228 PF03006 Haemolysin-III related J169_03229 PF05170 AsmA family J169_03230 PF00478 IMP dehydrogenase / GMP reductase domain J169_03230 PF00571 CBS domain J169_03231 PF00535 Glycosyl transferase family 2 J169_03232 PF00912 Transglycosylase J169_03233 PF01430 Hsp33 protein J169_03235 PF07715 TonB-dependent Receptor Plug Domain J169_03235 PF00593 TonB dependent receptor J169_03237 PF00440 Bacterial regulatory proteins, tetR family J169_03238 PF00561 alpha/beta hydrolase fold J169_03239 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J169_03239 PF09317 Domain of unknown function (DUF1974) J169_03239 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J169_03244 PF01597 Glycine cleavage H-protein J169_03245 PF08669 Glycine cleavage T-protein C-terminal barrel domain J169_03245 PF01571 Aminomethyltransferase folate-binding domain J169_03247 PF01145 SPFH domain / Band 7 family J169_03247 PF16200 C-terminal region of band_7 J169_03248 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J169_03249 PF03819 MazG nucleotide pyrophosphohydrolase domain J169_03250 PF00459 Inositol monophosphatase family J169_03251 PF00293 NUDIX domain J169_03252 PF00202 Aminotransferase class-III J169_03253 PF04452 RNA methyltransferase J169_03254 PF02685 Glucokinase J169_03257 PF01476 LysM domain J169_03257 PF00704 Glycosyl hydrolases family 18 J169_03258 PF00728 Glycosyl hydrolase family 20, catalytic domain J169_03258 PF02838 Glycosyl hydrolase family 20, domain 2 J169_03258 PF07691 PA14 domain J169_03260 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_03260 PF14310 Fibronectin type III-like domain J169_03260 PF07691 PA14 domain J169_03260 PF01915 Glycosyl hydrolase family 3 C-terminal domain J169_03262 PF01301 Glycosyl hydrolases family 35 J169_03263 PF13520 Amino acid permease J169_03265 PF11975 Family 4 glycosyl hydrolase C-terminal domain J169_03265 PF02056 Family 4 glycosyl hydrolase J169_03267 PF17678 Glycosyl hydrolase family 92 N-terminal domain J169_03267 PF07971 Glycosyl hydrolase family 92 J169_03268 PF01301 Glycosyl hydrolases family 35 J169_03274 PF03932 CutC family J169_03275 PF01112 Asparaginase J169_03276 PF13302 Acetyltransferase (GNAT) domain J169_03279 PF00072 Response regulator receiver domain J169_03279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03279 PF01584 CheW-like domain J169_03279 PF01627 Hpt domain J169_03280 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J169_03280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03282 PF00072 Response regulator receiver domain J169_03283 PF00072 Response regulator receiver domain J169_03284 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J169_03284 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J169_03286 PF03747 ADP-ribosylglycohydrolase J169_03287 PF00814 Glycoprotease family J169_03288 PF04851 Type III restriction enzyme, res subunit J169_03288 PF13307 Helicase C-terminal domain J169_03290 PF00912 Transglycosylase J169_03290 PF00905 Penicillin binding protein transpeptidase domain J169_03290 PF14814 Bifunctional transglycosylase second domain J169_03291 PF00535 Glycosyl transferase family 2 J169_03293 PF13291 ACT domain J169_03293 PF04607 Region found in RelA / SpoT proteins J169_03293 PF02824 TGS domain J169_03294 PF12706 Beta-lactamase superfamily domain J169_03295 PF03070 TENA/THI-4/PQQC family J169_03296 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J169_03297 PF13186 Iron-sulfur cluster-binding domain J169_03297 PF04055 Radical SAM superfamily J169_03300 PF02685 Glucokinase J169_03302 PF00270 DEAD/DEAH box helicase J169_03302 PF04408 Helicase associated domain (HA2) J169_03302 PF00271 Helicase conserved C-terminal domain J169_03302 PF11898 Domain of unknown function (DUF3418) J169_03302 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J169_03303 PF00210 Ferritin-like domain J169_03304 PF16124 RecQ zinc-binding J169_03304 PF00270 DEAD/DEAH box helicase J169_03304 PF00570 HRDC domain J169_03304 PF09382 RQC domain J169_03304 PF00271 Helicase conserved C-terminal domain J169_03311 PF02203 Tar ligand binding domain homologue J169_03311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03311 PF00672 HAMP domain J169_03315 PF07536 HWE histidine kinase J169_03315 PF13581 Histidine kinase-like ATPase domain J169_03315 PF13426 PAS domain J169_03316 PF06508 Queuosine biosynthesis protein QueC J169_03318 PF04055 Radical SAM superfamily J169_03320 PF00691 OmpA family J169_03321 PF04052 TolB amino-terminal domain J169_03321 PF07676 WD40-like Beta Propeller Repeat J169_03323 PF02472 Biopolymer transport protein ExbD/TolR J169_03324 PF01618 MotA/TolQ/ExbB proton channel family J169_03325 PF03061 Thioesterase superfamily J169_03326 PF05496 Holliday junction DNA helicase RuvB P-loop domain J169_03326 PF05491 RuvB C-terminal winged helix domain J169_03326 PF17864 RuvB AAA lid domain J169_03328 PF02705 K+ potassium transporter J169_03329 PF07499 RuvA, C-terminal domain J169_03329 PF01330 RuvA N terminal domain J169_03330 PF02075 Crossover junction endodeoxyribonuclease RuvC J169_03331 PF01709 Transcriptional regulator J169_03334 PF00152 tRNA synthetases class II (D, K and N) J169_03334 PF02938 GAD domain J169_03334 PF01336 OB-fold nucleic acid binding domain J169_03337 PF07690 Major Facilitator Superfamily J169_03340 PF04185 Phosphoesterase family J169_03340 PF05506 Domain of unknown function (DUF756) J169_03343 PF03466 LysR substrate binding domain J169_03343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03345 PF12848 ABC transporter J169_03345 PF00005 ABC transporter J169_03346 PF00593 TonB dependent receptor J169_03346 PF07715 TonB-dependent Receptor Plug Domain J169_03348 PF00593 TonB dependent receptor J169_03348 PF07715 TonB-dependent Receptor Plug Domain J169_03349 PF07715 TonB-dependent Receptor Plug Domain J169_03349 PF00593 TonB dependent receptor J169_03350 PF00067 Cytochrome P450 J169_03351 PF00999 Sodium/hydrogen exchanger family J169_03351 PF02254 TrkA-N domain J169_03356 PF00593 TonB dependent receptor J169_03356 PF07715 TonB-dependent Receptor Plug Domain J169_03356 PF07660 Secretin and TonB N terminus short domain J169_03358 PF06276 Ferric iron reductase FhuF-like transporter J169_03358 PF04183 IucA / IucC family J169_03359 PF07690 Major Facilitator Superfamily J169_03361 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J169_03361 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J169_03364 PF02654 Cobalamin-5-phosphate synthase J169_03366 PF02277 Phosphoribosyltransferase J169_03367 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J169_03368 PF07685 CobB/CobQ-like glutamine amidotransferase domain J169_03368 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J169_03369 PF00155 Aminotransferase class I and II J169_03371 PF03186 CobD/Cbib protein J169_03371 PF17113 Regulatory signalling modulator protein AmpE J169_03372 PF12557 Cob(I)alamin adenosyltransferase N terminal J169_03372 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J169_03375 PF07715 TonB-dependent Receptor Plug Domain J169_03375 PF00593 TonB dependent receptor J169_03377 PF10431 C-terminal, D2-small domain, of ClpB protein J169_03377 PF07724 AAA domain (Cdc48 subfamily) J169_03377 PF02861 Clp amino terminal domain, pathogenicity island component J169_03377 PF17871 AAA lid domain J169_03377 PF00004 ATPase family associated with various cellular activities (AAA) J169_03378 PF00005 ABC transporter J169_03379 PF00528 Binding-protein-dependent transport system inner membrane component J169_03380 PF09084 NMT1/THI5 like J169_03381 PF00248 Aldo/keto reductase family J169_03383 PF00593 TonB dependent receptor J169_03383 PF07715 TonB-dependent Receptor Plug Domain J169_03384 PF01541 GIY-YIG catalytic domain J169_03391 PF07715 TonB-dependent Receptor Plug Domain J169_03391 PF00593 TonB dependent receptor J169_03392 PF02358 Trehalose-phosphatase J169_03393 PF00723 Glycosyl hydrolases family 15 J169_03394 PF00982 Glycosyltransferase family 20 J169_03395 PF01011 PQQ enzyme repeat J169_03396 PF00672 HAMP domain J169_03396 PF02203 Tar ligand binding domain homologue J169_03396 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03397 PF04134 Protein of unknown function, DUF393 J169_03400 PF00849 RNA pseudouridylate synthase J169_03401 PF13525 Outer membrane lipoprotein J169_03403 PF02540 NAD synthase J169_03403 PF00795 Carbon-nitrogen hydrolase J169_03405 PF01527 Transposase J169_03409 PF13406 Transglycosylase SLT domain J169_03410 PF13700 Domain of unknown function (DUF4158) J169_03410 PF01526 Tn3 transposase DDE domain J169_03414 PF01129 NAD:arginine ADP-ribosyltransferase J169_03419 PF00549 CoA-ligase J169_03419 PF02629 CoA binding domain J169_03420 PF08442 ATP-grasp domain J169_03420 PF00549 CoA-ligase J169_03421 PF00512 His Kinase A (phospho-acceptor) domain J169_03421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03422 PF00072 Response regulator receiver domain J169_03422 PF02954 Bacterial regulatory protein, Fis family J169_03422 PF00158 Sigma-54 interaction domain J169_03424 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J169_03424 PF00437 Type II/IV secretion system protein J169_03425 PF00437 Type II/IV secretion system protein J169_03425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J169_03426 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J169_03426 PF00437 Type II/IV secretion system protein J169_03427 PF07963 Prokaryotic N-terminal methylation motif J169_03427 PF00114 Pilin (bacterial filament) J169_03428 PF00114 Pilin (bacterial filament) J169_03428 PF07963 Prokaryotic N-terminal methylation motif J169_03429 PF00482 Type II secretion system (T2SS), protein F J169_03430 PF01478 Type IV leader peptidase family J169_03430 PF06750 Bacterial Peptidase A24 N-terminal domain J169_03431 PF01121 Dephospho-CoA kinase J169_03434 PF01527 Transposase J169_03435 PF13276 HTH-like domain J169_03435 PF00665 Integrase core domain J169_03435 PF13333 Integrase core domain J169_03436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03436 PF00512 His Kinase A (phospho-acceptor) domain J169_03436 PF00989 PAS fold J169_03436 PF16736 Single Cache-like J169_03437 PF00072 Response regulator receiver domain J169_03437 PF00486 Transcriptional regulatory protein, C terminal J169_03439 PF18030 RimK PreATP-grasp domain J169_03439 PF08443 RimK-like ATP-grasp domain J169_03440 PF00128 Alpha amylase, catalytic domain J169_03440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J169_03453 PF04002 RadC-like JAB domain J169_03458 PF00072 Response regulator receiver domain J169_03458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03458 PF13426 PAS domain J169_03459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03459 PF00072 Response regulator receiver domain J169_03459 PF13426 PAS domain J169_03465 PF01527 Transposase J169_03474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03474 PF00512 His Kinase A (phospho-acceptor) domain J169_03474 PF08448 PAS fold J169_03474 PF13188 PAS domain J169_03474 PF00072 Response regulator receiver domain J169_03478 PF13676 TIR domain J169_03482 PF00657 GDSL-like Lipase/Acylhydrolase J169_03482 PF03797 Autotransporter beta-domain J169_03484 PF05690 Thiazole biosynthesis protein ThiG J169_03485 PF02390 Putative methyltransferase J169_03486 PF03600 Citrate transporter J169_03486 PF02080 TrkA-C domain J169_03489 PF01557 Fumarylacetoacetate (FAA) hydrolase family J169_03490 PF01741 Large-conductance mechanosensitive channel, MscL J169_03492 PF00356 Bacterial regulatory proteins, lacI family J169_03494 PF00703 Glycosyl hydrolases family 2 J169_03494 PF02837 Glycosyl hydrolases family 2, sugar binding domain J169_03494 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J169_03495 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J169_03495 PF10566 Glycoside hydrolase 97 J169_03495 PF14508 Glycosyl-hydrolase 97 N-terminal J169_03497 PF00135 Carboxylesterase family J169_03498 PF08032 RNA 2'-O ribose methyltransferase substrate binding J169_03498 PF00588 SpoU rRNA Methylase family J169_03500 PF11838 ERAP1-like C-terminal domain J169_03500 PF01433 Peptidase family M1 domain J169_03503 PF01527 Transposase J169_03509 PF00873 AcrB/AcrD/AcrF family J169_03510 PF00529 HlyD membrane-fusion protein of T1SS J169_03510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_03511 PF00009 Elongation factor Tu GTP binding domain J169_03512 PF01507 Phosphoadenosine phosphosulfate reductase family J169_03513 PF00258 Flavodoxin J169_03513 PF00175 Oxidoreductase NAD-binding domain J169_03513 PF00667 FAD binding domain J169_03514 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J169_03514 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J169_03515 PF01507 Phosphoadenosine phosphosulfate reductase family J169_03519 PF00512 His Kinase A (phospho-acceptor) domain J169_03519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03519 PF01627 Hpt domain J169_03519 PF00072 Response regulator receiver domain J169_03521 PF03466 LysR substrate binding domain J169_03521 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03522 PF14824 Sirohaem biosynthesis protein central J169_03522 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J169_03522 PF10414 Sirohaem synthase dimerisation region J169_03523 PF00291 Pyridoxal-phosphate dependent enzyme J169_03525 PF01661 Macro domain J169_03526 PF00274 Fructose-bisphosphate aldolase class-I J169_03527 PF02887 Pyruvate kinase, alpha/beta domain J169_03527 PF00224 Pyruvate kinase, barrel domain J169_03529 PF00162 Phosphoglycerate kinase J169_03534 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J169_03534 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J169_03536 PF03922 OmpW family J169_03537 PF03922 OmpW family J169_03539 PF00753 Metallo-beta-lactamase superfamily J169_03539 PF04273 Putative phosphatase (DUF442) J169_03541 PF00528 Binding-protein-dependent transport system inner membrane component J169_03542 PF03459 TOBE domain J169_03542 PF00005 ABC transporter J169_03549 PF01476 LysM domain J169_03549 PF03734 L,D-transpeptidase catalytic domain J169_03550 PF01551 Peptidase family M23 J169_03550 PF04225 Opacity-associated protein A LysM-like domain J169_03552 PF00593 TonB dependent receptor J169_03552 PF07715 TonB-dependent Receptor Plug Domain J169_03553 PF12146 Serine aminopeptidase, S33 J169_03554 PF00456 Transketolase, thiamine diphosphate binding domain J169_03554 PF02780 Transketolase, C-terminal domain J169_03554 PF02779 Transketolase, pyrimidine binding domain J169_03555 PF00375 Sodium:dicarboxylate symporter family J169_03557 PF07584 Aerotolerance regulator N-terminal J169_03557 PF00092 von Willebrand factor type A domain J169_03561 PF07726 ATPase family associated with various cellular activities (AAA) J169_03561 PF17863 AAA lid domain J169_03563 PF07660 Secretin and TonB N terminus short domain J169_03563 PF03958 Bacterial type II/III secretion system short domain J169_03563 PF11741 AMIN domain J169_03563 PF00263 Bacterial type II and III secretion system protein J169_03568 PF00912 Transglycosylase J169_03568 PF17092 Penicillin-binding protein OB-like domain J169_03568 PF00905 Penicillin binding protein transpeptidase domain J169_03571 PF00285 Citrate synthase, C-terminal domain J169_03572 PF01197 Ribosomal protein L31 J169_03573 PF01156 Inosine-uridine preferring nucleoside hydrolase J169_03574 PF00270 DEAD/DEAH box helicase J169_03574 PF00271 Helicase conserved C-terminal domain J169_03574 PF17191 RecG wedge domain J169_03575 PF01042 Endoribonuclease L-PSP J169_03576 PF04607 Region found in RelA / SpoT proteins J169_03576 PF13291 ACT domain J169_03576 PF02824 TGS domain J169_03577 PF01192 RNA polymerase Rpb6 J169_03578 PF00625 Guanylate kinase J169_03579 PF03755 YicC-like family, N-terminal region J169_03579 PF08340 Domain of unknown function (DUF1732) J169_03580 PF03725 3' exoribonuclease family, domain 2 J169_03580 PF01138 3' exoribonuclease family, domain 1 J169_03582 PF01725 Ham1 family J169_03583 PF06969 HemN C-terminal domain J169_03583 PF04055 Radical SAM superfamily J169_03586 PF00557 Metallopeptidase family M24 J169_03588 PF00557 Metallopeptidase family M24 J169_03588 PF05195 Aminopeptidase P, N-terminal domain J169_03589 PF03695 Uncharacterised protein family (UPF0149) J169_03591 PF05164 Cell division protein ZapA J169_03593 PF01812 5-formyltetrahydrofolate cyclo-ligase family J169_03595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J169_03597 PF13369 Transglutaminase-like superfamily J169_03598 PF00301 Rubredoxin J169_03599 PF02581 Thiamine monophosphate synthase J169_03602 PF00202 Aminotransferase class-III J169_03603 PF00196 Bacterial regulatory proteins, luxR family J169_03603 PF17874 MalT-like TPR region J169_03604 PF00127 Copper binding proteins, plastocyanin/azurin family J169_03605 PF00155 Aminotransferase class I and II J169_03607 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J169_03607 PF00034 Cytochrome c J169_03608 PF01593 Flavin containing amine oxidoreductase J169_03611 PF00202 Aminotransferase class-III J169_03612 PF00027 Cyclic nucleotide-binding domain J169_03612 PF00520 Ion transport protein J169_03615 PF01569 PAP2 superfamily J169_03616 PF01062 Bestrophin, RFP-TM, chloride channel J169_03618 PF08245 Mur ligase middle domain J169_03618 PF01225 Mur ligase family, catalytic domain J169_03618 PF02875 Mur ligase family, glutamate ligase domain J169_03620 PF00365 Phosphofructokinase J169_03622 PF03030 Inorganic H+ pyrophosphatase J169_03624 PF00719 Inorganic pyrophosphatase J169_03626 PF00593 TonB dependent receptor J169_03626 PF07715 TonB-dependent Receptor Plug Domain J169_03627 PF12833 Helix-turn-helix domain J169_03628 PF18500 CadC C-terminal domain 1 J169_03628 PF00486 Transcriptional regulatory protein, C terminal J169_03629 PF01964 Radical SAM ThiC family J169_03629 PF13667 ThiC-associated domain J169_03631 PF00593 TonB dependent receptor J169_03631 PF07715 TonB-dependent Receptor Plug Domain J169_03632 PF02203 Tar ligand binding domain homologue J169_03632 PF00672 HAMP domain J169_03632 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03634 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J169_03634 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J169_03635 PF00205 Thiamine pyrophosphate enzyme, central domain J169_03635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J169_03635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J169_03637 PF00291 Pyridoxal-phosphate dependent enzyme J169_03638 PF08502 LeuA allosteric (dimerisation) domain J169_03638 PF00682 HMGL-like J169_03639 PF00180 Isocitrate/isopropylmalate dehydrogenase J169_03640 PF00694 Aconitase C-terminal domain J169_03641 PF00330 Aconitase family (aconitate hydratase) J169_03642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03643 PF17151 Periplasmic sensor domain J169_03643 PF00990 Diguanylate cyclase, GGDEF domain J169_03646 PF02321 Outer membrane efflux protein J169_03647 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J169_03648 PF03279 Bacterial lipid A biosynthesis acyltransferase J169_03653 PF00390 Malic enzyme, N-terminal domain J169_03653 PF01515 Phosphate acetyl/butaryl transferase J169_03653 PF03949 Malic enzyme, NAD binding domain J169_03654 PF00375 Sodium:dicarboxylate symporter family J169_03656 PF02743 Cache domain J169_03656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03656 PF00512 His Kinase A (phospho-acceptor) domain J169_03657 PF07690 Major Facilitator Superfamily J169_03659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03659 PF03466 LysR substrate binding domain J169_03660 PF00248 Aldo/keto reductase family J169_03664 PF00196 Bacterial regulatory proteins, luxR family J169_03664 PF00072 Response regulator receiver domain J169_03666 PF00512 His Kinase A (phospho-acceptor) domain J169_03666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03666 PF08521 Two-component sensor kinase N-terminal J169_03667 PF00072 Response regulator receiver domain J169_03667 PF00486 Transcriptional regulatory protein, C terminal J169_03669 PF03600 Citrate transporter J169_03671 PF00106 short chain dehydrogenase J169_03672 PF00356 Bacterial regulatory proteins, lacI family J169_03675 PF00128 Alpha amylase, catalytic domain J169_03678 PF03193 RsgA GTPase J169_03682 PF07715 TonB-dependent Receptor Plug Domain J169_03682 PF00593 TonB dependent receptor J169_03683 PF01522 Polysaccharide deacetylase J169_03684 PF00462 Glutaredoxin J169_03687 PF01527 Transposase J169_03692 PF02645 Uncharacterised protein, DegV family COG1307 J169_03693 PF01327 Polypeptide deformylase J169_03694 PF03960 ArsC family J169_03697 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J169_03698 PF01270 Glycosyl hydrolases family 8 J169_03699 PF03170 Bacterial cellulose synthase subunit J169_03700 PF07238 PilZ domain J169_03700 PF03552 Cellulose synthase J169_03700 PF00535 Glycosyl transferase family 2 J169_03704 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J169_03704 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J169_03712 PF00593 TonB dependent receptor J169_03712 PF07715 TonB-dependent Receptor Plug Domain J169_03714 PF00392 Bacterial regulatory proteins, gntR family J169_03714 PF07702 UTRA domain J169_03716 PF00263 Bacterial type II and III secretion system protein J169_03716 PF03958 Bacterial type II/III secretion system short domain J169_03718 PF10741 Type II secretion system (T2SS), protein M subtype b J169_03719 PF05137 Fimbrial assembly protein (PilN) J169_03720 PF03934 Type II secretion system (T2SS), protein K J169_03722 PF07963 Prokaryotic N-terminal methylation motif J169_03723 PF12019 Type II transport protein GspH J169_03724 PF08334 Type II secretion system (T2SS), protein G J169_03725 PF00482 Type II secretion system (T2SS), protein F J169_03726 PF00437 Type II/IV secretion system protein J169_03726 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J169_03727 PF00082 Subtilase family J169_03727 PF04151 Bacterial pre-peptidase C-terminal domain J169_03728 PF03895 YadA-like membrane anchor domain J169_03728 PF05658 Head domain of trimeric autotransporter adhesin J169_03728 PF13018 Extended Signal Peptide of Type V secretion system J169_03728 PF05662 Coiled stalk of trimeric autotransporter adhesin J169_03729 PF04151 Bacterial pre-peptidase C-terminal domain J169_03729 PF00082 Subtilase family J169_03730 PF05662 Coiled stalk of trimeric autotransporter adhesin J169_03730 PF05658 Head domain of trimeric autotransporter adhesin J169_03730 PF03895 YadA-like membrane anchor domain J169_03730 PF13018 Extended Signal Peptide of Type V secretion system J169_03731 PF02769 AIR synthase related protein, C-terminal domain J169_03731 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J169_03731 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J169_03732 PF10411 Disulfide bond isomerase protein N-terminus J169_03732 PF13098 Thioredoxin-like domain J169_03733 PF00589 Phage integrase family J169_03733 PF02899 Phage integrase, N-terminal SAM-like domain J169_03736 PF03739 Lipopolysaccharide export system permease LptF/LptG J169_03738 PF00883 Cytosol aminopeptidase family, catalytic domain J169_03738 PF02789 Cytosol aminopeptidase family, N-terminal domain J169_03741 PF08264 Anticodon-binding domain of tRNA J169_03741 PF10458 Valyl tRNA synthetase tRNA binding arm J169_03741 PF00133 tRNA synthetases class I (I, L, M and V) J169_03742 PF07715 TonB-dependent Receptor Plug Domain J169_03742 PF00593 TonB dependent receptor J169_03743 PF01464 Transglycosylase SLT domain J169_03743 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J169_03744 PF00544 Pectate lyase J169_03747 PF01066 CDP-alcohol phosphatidyltransferase J169_03749 PF04073 Aminoacyl-tRNA editing domain J169_03749 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J169_03749 PF03129 Anticodon binding domain J169_03750 PF00816 H-NS histone family J169_03752 PF02405 Permease MlaE J169_03753 PF00005 ABC transporter J169_03754 PF02470 MlaD protein J169_03754 PF03886 ABC-type transport auxiliary lipoprotein component J169_03758 PF14307 Glycosyltransferase WbsX J169_03758 PF05045 Rhamnan synthesis protein F J169_03759 PF01144 Coenzyme A transferase J169_03760 PF01144 Coenzyme A transferase J169_03761 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J169_03761 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J169_03761 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J169_03761 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J169_03762 PF01050 Mannose-6-phosphate isomerase J169_03762 PF00483 Nucleotidyl transferase J169_03763 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J169_03763 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J169_03763 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J169_03764 PF04321 RmlD substrate binding domain J169_03765 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J169_03766 PF00483 Nucleotidyl transferase J169_03767 PF16363 GDP-mannose 4,6 dehydratase J169_03768 PF01012 Electron transfer flavoprotein domain J169_03769 PF00766 Electron transfer flavoprotein FAD-binding domain J169_03769 PF01012 Electron transfer flavoprotein domain J169_03771 PF01040 UbiA prenyltransferase family J169_03772 PF01565 FAD binding domain J169_03772 PF04030 D-arabinono-1,4-lactone oxidase J169_03773 PF00106 short chain dehydrogenase J169_03775 PF01370 NAD dependent epimerase/dehydratase family J169_03776 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_03776 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J169_03781 PF00535 Glycosyl transferase family 2 J169_03783 PF14524 Wzt C-terminal domain J169_03783 PF00005 ABC transporter J169_03785 PF01053 Cys/Met metabolism PLP-dependent enzyme J169_03786 PF00291 Pyridoxal-phosphate dependent enzyme J169_03786 PF00571 CBS domain J169_03790 PF00437 Type II/IV secretion system protein J169_03791 PF14497 Glutathione S-transferase, C-terminal domain J169_03791 PF02798 Glutathione S-transferase, N-terminal domain J169_03793 PF00271 Helicase conserved C-terminal domain J169_03793 PF00270 DEAD/DEAH box helicase J169_03796 PF07715 TonB-dependent Receptor Plug Domain J169_03796 PF00593 TonB dependent receptor J169_03797 PF01242 6-pyruvoyl tetrahydropterin synthase J169_03800 PF13185 GAF domain J169_03802 PF00756 Putative esterase J169_03803 PF07715 TonB-dependent Receptor Plug Domain J169_03803 PF00593 TonB dependent receptor J169_03804 PF13419 Haloacid dehalogenase-like hydrolase J169_03805 PF00817 impB/mucB/samB family J169_03805 PF11799 impB/mucB/samB family C-terminal domain J169_03806 PF07977 FabA-like domain J169_03807 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_03807 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_03809 PF01432 Peptidase family M3 J169_03812 PF00394 Multicopper oxidase J169_03812 PF07732 Multicopper oxidase J169_03812 PF07731 Multicopper oxidase J169_03813 PF05275 Copper resistance protein B precursor (CopB) J169_03814 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J169_03820 PF01380 SIS domain J169_03821 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_03822 PF00005 ABC transporter J169_03822 PF12704 MacB-like periplasmic core domain J169_03822 PF02687 FtsX-like permease family J169_03823 PF12704 MacB-like periplasmic core domain J169_03823 PF00005 ABC transporter J169_03823 PF02687 FtsX-like permease family J169_03824 PF02687 FtsX-like permease family J169_03824 PF12704 MacB-like periplasmic core domain J169_03826 PF00072 Response regulator receiver domain J169_03826 PF00158 Sigma-54 interaction domain J169_03827 PF00132 Bacterial transferase hexapeptide (six repeats) J169_03827 PF14602 Hexapeptide repeat of succinyl-transferase J169_03827 PF12804 MobA-like NTP transferase domain J169_03830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J169_03830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J169_03831 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J169_03831 PF02874 ATP synthase alpha/beta family, beta-barrel domain J169_03832 PF00231 ATP synthase J169_03833 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J169_03833 PF00306 ATP synthase alpha/beta chain, C terminal domain J169_03833 PF02874 ATP synthase alpha/beta family, beta-barrel domain J169_03834 PF00213 ATP synthase delta (OSCP) subunit J169_03835 PF00430 ATP synthase B/B' CF(0) J169_03836 PF00137 ATP synthase subunit C J169_03837 PF00119 ATP synthase A chain J169_03841 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_03841 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J169_03843 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J169_03843 PF00364 Biotin-requiring enzyme J169_03843 PF02817 e3 binding domain J169_03849 PF03180 NLPA lipoprotein J169_03850 PF00528 Binding-protein-dependent transport system inner membrane component J169_03851 PF09383 NIL domain J169_03851 PF00005 ABC transporter J169_03852 PF00892 EamA-like transporter family J169_03853 PF04461 Protein of unknown function (DUF520) J169_03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03855 PF00072 Response regulator receiver domain J169_03855 PF01627 Hpt domain J169_03855 PF00989 PAS fold J169_03855 PF18415 Histidine kinase receptor ArcB trans-membrane domain J169_03855 PF00512 His Kinase A (phospho-acceptor) domain J169_03859 PF13419 Haloacid dehalogenase-like hydrolase J169_03860 PF00849 RNA pseudouridylate synthase J169_03860 PF01479 S4 domain J169_03861 PF05175 Methyltransferase small domain J169_03861 PF08468 Methyltransferase small domain N-terminal J169_03863 PF07995 Glucose / Sorbosone dehydrogenase J169_03865 PF00512 His Kinase A (phospho-acceptor) domain J169_03865 PF00989 PAS fold J169_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03869 PF01168 Alanine racemase, N-terminal domain J169_03869 PF00842 Alanine racemase, C-terminal domain J169_03870 PF01266 FAD dependent oxidoreductase J169_03871 PF01037 Lrp/AsnC ligand binding domain J169_03873 PF01641 SelR domain J169_03875 PF01618 MotA/TolQ/ExbB proton channel family J169_03876 PF13677 Membrane MotB of proton-channel complex MotA/MotB J169_03876 PF00691 OmpA family J169_03881 PF01061 ABC-2 type transporter J169_03882 PF00005 ABC transporter J169_03883 PF00999 Sodium/hydrogen exchanger family J169_03884 PF02469 Fasciclin domain J169_03885 PF03167 Uracil DNA glycosylase superfamily J169_03887 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J169_03889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03889 PF03466 LysR substrate binding domain J169_03890 PF03358 NADPH-dependent FMN reductase J169_03891 PF00248 Aldo/keto reductase family J169_03893 PF05649 Peptidase family M13 J169_03893 PF01431 Peptidase family M13 J169_03897 PF13520 Amino acid permease J169_03899 PF00072 Response regulator receiver domain J169_03899 PF04397 LytTr DNA-binding domain J169_03900 PF02743 Cache domain J169_03900 PF00672 HAMP domain J169_03900 PF06580 Histidine kinase J169_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_03903 PF05974 Domain of unknown function (DUF892) J169_03904 PF05067 Manganese containing catalase J169_03907 PF01339 CheB methylesterase J169_03907 PF01739 CheR methyltransferase, SAM binding domain J169_03907 PF03705 CheR methyltransferase, all-alpha domain J169_03907 PF08448 PAS fold J169_03910 PF02954 Bacterial regulatory protein, Fis family J169_03910 PF00072 Response regulator receiver domain J169_03910 PF00158 Sigma-54 interaction domain J169_03912 PF01654 Cytochrome bd terminal oxidase subunit I J169_03913 PF02322 Cytochrome bd terminal oxidase subunit II J169_03917 PF16363 GDP-mannose 4,6 dehydratase J169_03919 PF03275 UDP-galactopyranose mutase J169_03921 PF00664 ABC transporter transmembrane region J169_03921 PF00005 ABC transporter J169_03924 PF00107 Zinc-binding dehydrogenase J169_03924 PF13823 Alcohol dehydrogenase GroES-associated J169_03924 PF08240 Alcohol dehydrogenase GroES-like domain J169_03933 PF07715 TonB-dependent Receptor Plug Domain J169_03933 PF00593 TonB dependent receptor J169_03936 PF00005 ABC transporter J169_03938 PF03466 LysR substrate binding domain J169_03938 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03939 PF01042 Endoribonuclease L-PSP J169_03941 PF01527 Transposase J169_03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J169_03945 PF02203 Tar ligand binding domain homologue J169_03945 PF00672 HAMP domain J169_03948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_03948 PF03466 LysR substrate binding domain J169_03949 PF02525 Flavodoxin-like fold J169_03958 PF00557 Metallopeptidase family M24 J169_03963 PF04545 Sigma-70, region 4 J169_03963 PF04539 Sigma-70 region 3 J169_03963 PF04542 Sigma-70 region 2 J169_03963 PF00140 Sigma-70 factor, region 1.2 J169_03963 PF03979 Sigma-70 factor, region 1.1 J169_03963 PF04546 Sigma-70, non-essential region J169_03964 PF02580 D-Tyr-tRNA(Tyr) deacylase J169_03965 PF03279 Bacterial lipid A biosynthesis acyltransferase J169_03967 PF00925 GTP cyclohydrolase II J169_03971 PF00535 Glycosyl transferase family 2 J169_03974 PF01029 NusB family J169_03974 PF01189 16S rRNA methyltransferase RsmB/F J169_03975 PF02911 Formyl transferase, C-terminal domain J169_03975 PF00551 Formyl transferase J169_03976 PF01327 Polypeptide deformylase J169_03977 PF01476 LysM domain J169_03978 PF02481 DNA recombination-mediator protein A J169_03978 PF17782 DprA winged helix domain J169_03979 PF04361 Protein of unknown function (DUF494) J169_03980 PF07963 Prokaryotic N-terminal methylation motif J169_03980 PF00114 Pilin (bacterial filament) J169_03982 PF13368 Topoisomerase C-terminal repeat J169_03982 PF01751 Toprim domain J169_03982 PF01131 DNA topoisomerase J169_03983 PF01300 Telomere recombination J169_03988 PF01343 Peptidase family S49 J169_03989 PF01554 MatE J169_03993 PF00271 Helicase conserved C-terminal domain J169_03993 PF00270 DEAD/DEAH box helicase J169_03993 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J169_03993 PF18074 Primosomal protein N C-terminal domain J169_03993 PF17764 3′ DNA-binding domain (3′BD) J169_03994 PF13417 Glutathione S-transferase, N-terminal domain J169_03994 PF00043 Glutathione S-transferase, C-terminal domain J169_03997 PF07992 Pyridine nucleotide-disulphide oxidoreductase J169_03998 PF03458 UPF0126 domain J169_03999 PF04545 Sigma-70, region 4 J169_03999 PF04542 Sigma-70 region 2 J169_04000 PF03167 Uracil DNA glycosylase superfamily J169_04001 PF01339 CheB methylesterase J169_04001 PF00072 Response regulator receiver domain J169_04002 PF18075 FtsX extracellular domain J169_04003 PF00005 ABC transporter J169_04004 PF00271 Helicase conserved C-terminal domain J169_04004 PF00270 DEAD/DEAH box helicase J169_04004 PF12300 ATP-dependent RNA helicase RhlB J169_04005 PF00085 Thioredoxin J169_04006 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J169_04006 PF07497 Rho termination factor, RNA-binding domain J169_04006 PF07498 Rho termination factor, N-terminal domain J169_04007 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J169_04008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_04008 PF03466 LysR substrate binding domain J169_04010 PF03971 Monomeric isocitrate dehydrogenase J169_04013 PF09704 CRISPR-associated protein (Cas_Cas5) J169_04018 PF01867 CRISPR associated protein Cas1 J169_04019 PF09827 CRISPR associated protein Cas2 J169_04021 PF01476 LysM domain J169_04021 PF04972 BON domain J169_04022 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J169_04022 PF14489 QueF-like protein J169_04023 PF01546 Peptidase family M20/M25/M40 J169_04023 PF07687 Peptidase dimerisation domain J169_04024 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_04025 PF00873 AcrB/AcrD/AcrF family J169_04026 PF00873 AcrB/AcrD/AcrF family J169_04027 PF07063 Domain of unknown function (DUF1338) J169_04035 PF01427 D-ala-D-ala dipeptidase J169_04036 PF01510 N-acetylmuramoyl-L-alanine amidase J169_04038 PF13378 Enolase C-terminal domain-like J169_04038 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J169_04040 PF13520 Amino acid permease J169_04043 PF05360 yiaA/B two helix domain J169_04044 PF07995 Glucose / Sorbosone dehydrogenase J169_04045 PF01915 Glycosyl hydrolase family 3 C-terminal domain J169_04045 PF14310 Fibronectin type III-like domain J169_04045 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_04046 PF02152 Dihydroneopterin aldolase J169_04047 PF00814 Glycoprotease family J169_04048 PF01165 Ribosomal protein S21 J169_04049 PF09424 Yqey-like protein J169_04050 PF03631 Virulence factor BrkB J169_04051 PF10410 DnaB-helicase binding domain of primase J169_04051 PF01807 CHC2 zinc finger J169_04051 PF08278 DNA primase DnaG DnaB-binding J169_04051 PF08275 DNA primase catalytic core, N-terminal domain J169_04052 PF13593 SBF-like CPA transporter family (DUF4137) J169_04054 PF01040 UbiA prenyltransferase family J169_04059 PF00510 Cytochrome c oxidase subunit III J169_04060 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J169_04062 PF00115 Cytochrome C and Quinol oxidase polypeptide I J169_04063 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J169_04063 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J169_04065 PF00171 Aldehyde dehydrogenase family J169_04065 PF01619 Proline dehydrogenase J169_04065 PF14850 DNA-binding domain of Proline dehydrogenase J169_04065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J169_04073 PF00579 tRNA synthetases class I (W and Y) J169_04074 PF04225 Opacity-associated protein A LysM-like domain J169_04074 PF01551 Peptidase family M23 J169_04075 PF03702 Anhydro-N-acetylmuramic acid kinase J169_04077 PF07690 Major Facilitator Superfamily J169_04078 PF03372 Endonuclease/Exonuclease/phosphatase family J169_04079 PF00156 Phosphoribosyl transferase domain J169_04081 PF13614 AAA domain J169_04082 PF02195 ParB-like nuclease domain J169_04082 PF17762 HTH domain found in ParB protein J169_04084 PF01370 NAD dependent epimerase/dehydratase family J169_04085 PF00535 Glycosyl transferase family 2 J169_04088 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J169_04088 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J169_04088 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J169_04088 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J169_04089 PF00692 dUTPase J169_04090 PF04127 DNA / pantothenate metabolism flavoprotein J169_04090 PF02441 Flavoprotein J169_04091 PF04002 RadC-like JAB domain J169_04092 PF03485 Arginyl tRNA synthetase N terminal domain J169_04092 PF05746 DALR anticodon binding domain J169_04092 PF00750 tRNA synthetases class I (R) J169_04095 PF00106 short chain dehydrogenase J169_04096 PF01757 Acyltransferase family J169_04097 PF03033 Glycosyltransferase family 28 N-terminal domain J169_04098 PF00975 Thioesterase domain J169_04098 PF00668 Condensation domain J169_04098 PF00501 AMP-binding enzyme J169_04098 PF13193 AMP-binding enzyme C-terminal domain J169_04098 PF00550 Phosphopantetheine attachment site J169_04099 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J169_04099 PF17810 Arginine decarboxylase helical bundle domain J169_04099 PF17944 Arginine decarboxylase C-terminal helical extension J169_04100 PF17284 Spermidine synthase tetramerisation domain J169_04105 PF00543 Nitrogen regulatory protein P-II J169_04106 PF04380 Membrane fusogenic activity J169_04107 PF13335 Magnesium chelatase, subunit ChlI C-terminal J169_04107 PF01078 Magnesium chelatase, subunit ChlI J169_04113 PF13683 Integrase core domain J169_04113 PF13276 HTH-like domain J169_04117 PF00570 HRDC domain J169_04117 PF00580 UvrD/REP helicase N-terminal domain J169_04117 PF13361 UvrD-like helicase C-terminal domain J169_04120 PF01527 Transposase J169_04121 PF02463 RecF/RecN/SMC N terminal domain J169_04130 PF01078 Magnesium chelatase, subunit ChlI J169_04130 PF13335 Magnesium chelatase, subunit ChlI C-terminal J169_04133 PF12792 CSS motif domain associated with EAL J169_04133 PF00563 EAL domain J169_04134 PF00487 Fatty acid desaturase J169_04135 PF00111 2Fe-2S iron-sulfur cluster binding domain J169_04135 PF00175 Oxidoreductase NAD-binding domain J169_04135 PF00970 Oxidoreductase FAD-binding domain J169_04136 PF00440 Bacterial regulatory proteins, tetR family J169_04142 PF01139 tRNA-splicing ligase RtcB J169_04150 PF08338 Domain of unknown function (DUF1731) J169_04150 PF01370 NAD dependent epimerase/dehydratase family J169_04151 PF00072 Response regulator receiver domain J169_04151 PF00486 Transcriptional regulatory protein, C terminal J169_04152 PF00512 His Kinase A (phospho-acceptor) domain J169_04152 PF08521 Two-component sensor kinase N-terminal J169_04152 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_04156 PF00595 PDZ domain J169_04160 PF01594 AI-2E family transporter J169_04161 PF13419 Haloacid dehalogenase-like hydrolase J169_04162 PF00883 Cytosol aminopeptidase family, catalytic domain J169_04162 PF02789 Cytosol aminopeptidase family, N-terminal domain J169_04164 PF08281 Sigma-70, region 4 J169_04164 PF04542 Sigma-70 region 2 J169_04165 PF00199 Catalase J169_04168 PF00072 Response regulator receiver domain J169_04168 PF00196 Bacterial regulatory proteins, luxR family J169_04169 PF07730 Histidine kinase J169_04170 PF13533 Biotin-lipoyl like J169_04171 PF00005 ABC transporter J169_04175 PF00892 EamA-like transporter family J169_04176 PF00892 EamA-like transporter family J169_04177 PF00892 EamA-like transporter family J169_04180 PF00753 Metallo-beta-lactamase superfamily J169_04181 PF00579 tRNA synthetases class I (W and Y) J169_04182 PF05532 CsbD-like J169_04185 PF00491 Arginase family J169_04190 PF02223 Thymidylate kinase J169_04193 PF03309 Type III pantothenate kinase J169_04194 PF02237 Biotin protein ligase C terminal domain J169_04194 PF03099 Biotin/lipoate A/B protein ligase family J169_04194 PF08279 HTH domain J169_04196 PF06167 Glucose-regulated metallo-peptidase M90 J169_04199 PF00672 HAMP domain J169_04199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_04199 PF00512 His Kinase A (phospho-acceptor) domain J169_04200 PF00486 Transcriptional regulatory protein, C terminal J169_04200 PF00072 Response regulator receiver domain J169_04202 PF01207 Dihydrouridine synthase (Dus) J169_04205 PF06628 Catalase-related immune-responsive J169_04205 PF00199 Catalase J169_04206 PF13307 Helicase C-terminal domain J169_04206 PF06733 DEAD_2 J169_04209 PF08501 Shikimate dehydrogenase substrate binding domain J169_04209 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J169_04209 PF01488 Shikimate / quinate 5-dehydrogenase J169_04211 PF00175 Oxidoreductase NAD-binding domain J169_04211 PF00667 FAD binding domain J169_04211 PF00258 Flavodoxin J169_04213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_04213 PF03466 LysR substrate binding domain J169_04215 PF00490 Delta-aminolevulinic acid dehydratase J169_04219 PF00326 Prolyl oligopeptidase family J169_04219 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J169_04220 PF02798 Glutathione S-transferase, N-terminal domain J169_04220 PF00043 Glutathione S-transferase, C-terminal domain J169_04224 PF04820 Tryptophan halogenase J169_04227 PF00005 ABC transporter J169_04229 PF01381 Helix-turn-helix J169_04231 PF01229 Glycosyl hydrolases family 39 J169_04232 PF02583 Metal-sensitive transcriptional repressor J169_04233 PF16916 Dimerisation domain of Zinc Transporter J169_04233 PF01545 Cation efflux family J169_04235 PF07715 TonB-dependent Receptor Plug Domain J169_04235 PF00593 TonB dependent receptor J169_04237 PF01965 DJ-1/PfpI family J169_04237 PF12833 Helix-turn-helix domain J169_04238 PF00111 2Fe-2S iron-sulfur cluster binding domain J169_04238 PF00970 Oxidoreductase FAD-binding domain J169_04238 PF00175 Oxidoreductase NAD-binding domain J169_04239 PF00005 ABC transporter J169_04240 PF01061 ABC-2 type transporter J169_04243 PF08546 Ketopantoate reductase PanE/ApbA C terminal J169_04243 PF02558 Ketopantoate reductase PanE/ApbA J169_04249 PF00268 Ribonucleotide reductase, small chain J169_04250 PF00317 Ribonucleotide reductase, all-alpha domain J169_04250 PF02867 Ribonucleotide reductase, barrel domain J169_04250 PF03477 ATP cone domain J169_04252 PF13607 Succinyl-CoA ligase like flavodoxin domain J169_04252 PF13380 CoA binding domain J169_04252 PF00583 Acetyltransferase (GNAT) family J169_04253 PF01769 Divalent cation transporter J169_04253 PF03448 MgtE intracellular N domain J169_04253 PF00571 CBS domain J169_04254 PF00194 Eukaryotic-type carbonic anhydrase J169_04255 PF00999 Sodium/hydrogen exchanger family J169_04255 PF02254 TrkA-N domain J169_04256 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J169_04256 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J169_04257 PF00723 Glycosyl hydrolases family 15 J169_04260 PF05166 YcgL domain J169_04261 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_04261 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_04263 PF00535 Glycosyl transferase family 2 J169_04274 PF07977 FabA-like domain J169_04275 PF01553 Acyltransferase J169_04277 PF00550 Phosphopantetheine attachment site J169_04278 PF04820 Tryptophan halogenase J169_04282 PF07676 WD40-like Beta Propeller Repeat J169_04282 PF00326 Prolyl oligopeptidase family J169_04285 PF01218 Coproporphyrinogen III oxidase J169_04286 PF00476 DNA polymerase family A J169_04286 PF01612 3'-5' exonuclease J169_04286 PF01367 5'-3' exonuclease, C-terminal SAM fold J169_04286 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J169_04292 PF03793 PASTA domain J169_04292 PF00069 Protein kinase domain J169_04300 PF04717 Type VI secretion system, phage-baseplate injector J169_04303 PF00069 Protein kinase domain J169_04303 PF03793 PASTA domain J169_04305 PF08281 Sigma-70, region 4 J169_04305 PF04542 Sigma-70 region 2 J169_04308 PF00328 Histidine phosphatase superfamily (branch 2) J169_04315 PF10431 C-terminal, D2-small domain, of ClpB protein J169_04315 PF17871 AAA lid domain J169_04315 PF07724 AAA domain (Cdc48 subfamily) J169_04315 PF00004 ATPase family associated with various cellular activities (AAA) J169_04320 PF05638 Type VI secretion system effector, Hcp J169_04325 PF14602 Hexapeptide repeat of succinyl-transferase J169_04325 PF12464 Maltose acetyltransferase J169_04326 PF13361 UvrD-like helicase C-terminal domain J169_04326 PF00580 UvrD/REP helicase N-terminal domain J169_04328 PF13396 Phospholipase_D-nuclease N-terminal J169_04328 PF13091 PLD-like domain J169_04329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_04329 PF03466 LysR substrate binding domain J169_04330 PF03737 Aldolase/RraA J169_04331 PF04303 PrpF protein J169_04332 PF04909 Amidohydrolase J169_04333 PF00471 Ribosomal protein L33 J169_04334 PF00830 Ribosomal L28 family J169_04335 PF00873 AcrB/AcrD/AcrF family J169_04336 PF13533 Biotin-lipoyl like J169_04340 PF02527 rRNA small subunit methyltransferase G J169_04341 PF09423 PhoD-like phosphatase J169_04341 PF16655 PhoD-like phosphatase, N-terminal domain J169_04343 PF09423 PhoD-like phosphatase J169_04343 PF16655 PhoD-like phosphatase, N-terminal domain J169_04344 PF01648 4'-phosphopantetheinyl transferase superfamily J169_04345 PF04226 Transglycosylase associated protein J169_04347 PF03372 Endonuclease/Exonuclease/phosphatase family J169_04349 PF00480 ROK family J169_04351 PF09312 SurA N-terminal domain J169_04353 PF00474 Sodium:solute symporter family J169_04354 PF04341 Protein of unknown function, DUF485 J169_04356 PF00501 AMP-binding enzyme J169_04356 PF13193 AMP-binding enzyme C-terminal domain J169_04356 PF16177 Acetyl-coenzyme A synthetase N-terminus J169_04357 PF00072 Response regulator receiver domain J169_04357 PF00196 Bacterial regulatory proteins, luxR family J169_04362 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J169_04362 PF04616 Glycosyl hydrolases family 43 J169_04363 PF00248 Aldo/keto reductase family J169_04366 PF01557 Fumarylacetoacetate (FAA) hydrolase family J169_04367 PF13378 Enolase C-terminal domain-like J169_04367 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J169_04369 PF05336 L-rhamnose mutarotase J169_04370 PF07690 Major Facilitator Superfamily J169_04371 PF01614 Bacterial transcriptional regulator J169_04371 PF09339 IclR helix-turn-helix domain J169_04372 PF02659 Putative manganese efflux pump J169_04373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_04373 PF00512 His Kinase A (phospho-acceptor) domain J169_04375 PF06165 Glycosyltransferase family 36 J169_04375 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J169_04378 PF13360 PQQ-like domain J169_04378 PF01011 PQQ enzyme repeat J169_04378 PF13570 PQQ-like domain J169_04382 PF04357 TamB, inner membrane protein subunit of TAM complex J169_04383 PF01103 Surface antigen J169_04383 PF17243 POTRA domain TamA domain 1 J169_04386 PF01527 Transposase J169_04388 PF03412 Peptidase C39 family J169_04388 PF00005 ABC transporter J169_04388 PF00664 ABC transporter transmembrane region J169_04390 PF05746 DALR anticodon binding domain J169_04390 PF02092 Glycyl-tRNA synthetase beta subunit J169_04391 PF02091 Glycyl-tRNA synthetase alpha subunit J169_04392 PF00437 Type II/IV secretion system protein J169_04392 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J169_04394 PF00117 Glutamine amidotransferase class-I J169_04394 PF00958 GMP synthase C terminal domain J169_04396 PF00902 Sec-independent protein translocase protein (TatC) J169_04397 PF02416 mttA/Hcf106 family J169_04398 PF02416 mttA/Hcf106 family J169_04400 PF00762 Ferrochelatase J169_04401 PF12697 Alpha/beta hydrolase family J169_04403 PF04381 Putative exonuclease, RdgC J169_04404 PF01171 PP-loop family J169_04406 PF00356 Bacterial regulatory proteins, lacI family J169_04407 PF07488 Glycosyl hydrolase family 67 middle domain J169_04407 PF03648 Glycosyl hydrolase family 67 N-terminus J169_04407 PF07477 Glycosyl hydrolase family 67 C-terminus J169_04409 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J169_04409 PF13378 Enolase C-terminal domain-like J169_04410 PF04616 Glycosyl hydrolases family 43 J169_04410 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J169_04411 PF07691 PA14 domain J169_04411 PF01915 Glycosyl hydrolase family 3 C-terminal domain J169_04411 PF00933 Glycosyl hydrolase family 3 N terminal domain J169_04411 PF14310 Fibronectin type III-like domain J169_04412 PF01232 Mannitol dehydrogenase Rossmann domain J169_04412 PF08125 Mannitol dehydrogenase C-terminal domain J169_04417 PF00171 Aldehyde dehydrogenase family J169_04420 PF00202 Aminotransferase class-III J169_04421 PF00202 Aminotransferase class-III J169_04423 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J169_04423 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J169_04426 PF08450 SMP-30/Gluconolactonase/LRE-like region J169_04427 PF00331 Glycosyl hydrolase family 10 J169_04428 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J169_04428 PF02837 Glycosyl hydrolases family 2, sugar binding domain J169_04428 PF16355 Domain of unknown function (DUF4982) J169_04428 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J169_04428 PF00703 Glycosyl hydrolases family 2 J169_04429 PF02614 Glucuronate isomerase J169_04430 PF00553 Cellulose binding domain J169_04430 PF00331 Glycosyl hydrolase family 10 J169_04430 PF03422 Carbohydrate binding module (family 6) J169_04432 PF00553 Cellulose binding domain J169_04432 PF00331 Glycosyl hydrolase family 10 J169_04432 PF03422 Carbohydrate binding module (family 6) J169_04436 PF04616 Glycosyl hydrolases family 43 J169_04446 PF16197 Ketoacyl-synthetase C-terminal extension J169_04446 PF08240 Alcohol dehydrogenase GroES-like domain J169_04446 PF00698 Acyl transferase domain J169_04446 PF00109 Beta-ketoacyl synthase, N-terminal domain J169_04446 PF14765 Polyketide synthase dehydratase J169_04446 PF02801 Beta-ketoacyl synthase, C-terminal domain J169_04446 PF00550 Phosphopantetheine attachment site J169_04446 PF08659 KR domain J169_04446 PF00107 Zinc-binding dehydrogenase J169_04447 PF01553 Acyltransferase J169_04449 PF00356 Bacterial regulatory proteins, lacI family J169_04452 PF04820 Tryptophan halogenase J169_04453 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J169_04454 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J169_04456 PF04337 Protein of unknown function, DUF480 J169_04459 PF00580 UvrD/REP helicase N-terminal domain J169_04459 PF13361 UvrD-like helicase C-terminal domain J169_04460 PF00265 Thymidine kinase J169_04461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J169_04461 PF00512 His Kinase A (phospho-acceptor) domain J169_04461 PF08446 PAS fold J169_04461 PF01590 GAF domain J169_04461 PF00360 Phytochrome region J169_04462 PF04349 Periplasmic glucan biosynthesis protein, MdoG J169_04464 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J169_04464 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J169_04464 PF06827 Zinc finger found in FPG and IleRS J169_04471 PF03594 Benzoate membrane transport protein J169_04472 PF00360 Phytochrome region J169_04472 PF13426 PAS domain J169_04472 PF01590 GAF domain J169_04472 PF08446 PAS fold J169_04473 PF01126 Heme oxygenase J169_04474 PF07690 Major Facilitator Superfamily J169_04475 PF01263 Aldose 1-epimerase J169_04477 PF02810 SEC-C motif J169_04478 PF01925 Sulfite exporter TauE/SafE J169_04482 PF01227 GTP cyclohydrolase I J169_04484 PF07869 Protein of unknown function (DUF1656) J169_04485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J169_04485 PF00529 HlyD membrane-fusion protein of T1SS J169_04486 PF02321 Outer membrane efflux protein J169_04487 PF04632 Fusaric acid resistance protein family J169_04488 PF00083 Sugar (and other) transporter J169_04489 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J169_04490 PF13396 Phospholipase_D-nuclease N-terminal J169_04490 PF13091 PLD-like domain J169_04495 PF01850 PIN domain J169_04501 PF00849 RNA pseudouridylate synthase J169_04503 PF01527 Transposase J169_04507 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J169_04507 PF00289 Biotin carboxylase, N-terminal domain J169_04507 PF02785 Biotin carboxylase C-terminal domain J169_04508 PF01425 Amidase J169_04515 PF13538 UvrD-like helicase C-terminal domain J169_04518 PF00580 UvrD/REP helicase N-terminal domain J169_04518 PF13361 UvrD-like helicase C-terminal domain J169_04518 PF12705 PD-(D/E)XK nuclease superfamily J169_04519 PF17946 RecC C-terminal domain J169_04521 PF00005 ABC transporter J169_04522 PF02405 Permease MlaE J169_04523 PF02470 MlaD protein J169_04524 PF05494 MlaC protein J169_04526 PF04333 MlaA lipoprotein J169_04528 PF00255 Glutathione peroxidase J169_04530 PF02646 RmuC family J169_04531 PF08240 Alcohol dehydrogenase GroES-like domain J169_04531 PF00107 Zinc-binding dehydrogenase J169_04532 PF03466 LysR substrate binding domain J169_04532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J169_04534 PF13417 Glutathione S-transferase, N-terminal domain J169_04534 PF00043 Glutathione S-transferase, C-terminal domain J169_04536 PF13520 Amino acid permease J169_04537 PF07971 Glycosyl hydrolase family 92 J169_04537 PF17678 Glycosyl hydrolase family 92 N-terminal domain J169_04538 PF10947 Protein of unknown function (DUF2628) J169_04539 PF00990 Diguanylate cyclase, GGDEF domain J169_04540 PF13556 PucR C-terminal helix-turn-helix domain J169_04540 PF17853 GGDEF-like domain J169_04540 PF05651 Putative sugar diacid recognition J169_04541 PF02595 Glycerate kinase family J169_04542 PF07690 Major Facilitator Superfamily J169_04545 PF17785 PUA-like domain J169_04545 PF10672 S-adenosylmethionine-dependent methyltransferase J169_04547 PF03741 Integral membrane protein TerC family J169_04548 PF01694 Rhomboid family J169_04549 PF03009 Glycerophosphoryl diester phosphodiesterase family J169_04551 PF01569 PAP2 superfamily J169_04552 PF01926 50S ribosome-binding GTPase J169_04552 PF12631 MnmE helical domain J169_04552 PF10396 GTP-binding protein TrmE N-terminus J169_04553 PF01522 Polysaccharide deacetylase J169_04554 PF14849 YidC periplasmic domain J169_04554 PF02096 60Kd inner membrane protein J169_04555 PF00825 Ribonuclease P J169_04556 PF00468 Ribosomal protein L34