J169_00003 SM00857 Resolvase, N terminal domain J169_00004 SM00966 SpoVT / AbrB like domain J169_00026 SM00857 Resolvase, N terminal domain J169_00034 SM00670 Large family of predicted nucleotide-binding domains J169_00036 SM00857 Resolvase, N terminal domain J169_00092 SM00470 ParB-like nuclease domain J169_00099 SM00857 Resolvase, N terminal domain J169_00106 SM00670 Large family of predicted nucleotide-binding domains J169_00108 SM00857 Resolvase, N terminal domain J169_00109 SM00382 ATPases associated with a variety of cellular activities J169_00109 SM00760 Bacterial dnaA protein helix-turn-helix domain J169_00110 SM00480 DNA polymerase III beta subunit J169_00113 SM00387 Histidine kinase-like ATPases J169_00113 SM00433 TopoisomeraseII J169_00116 SM00028 Tetratricopeptide repeats J169_00123 SM00155 Phospholipase D. Active site motifs. J169_00126 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_00132 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_00132 SM00245 tail specific protease J169_00140 SM00829 Enoylreductase J169_00165 SM00382 ATPases associated with a variety of cellular activities J169_00189 SM00487 DEAD-like helicases superfamily J169_00189 SM00490 helicase superfamily c-terminal domain J169_00193 SM00822 J169_00193 J169_00194 SM00822 J169_00194 J169_00243 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J169_00247 SM00421 helix_turn_helix, Lux Regulon J169_00247 SM00448 cheY-homologous receiver domain J169_00251 SM00862 Transcriptional regulatory protein, C terminal J169_00267 SM00642 Alpha-amylase domain J169_00268 SM00642 Alpha-amylase domain J169_00269 SM00642 Alpha-amylase domain J169_00279 SM00354 helix_turn _helix lactose operon repressor J169_00287 SM00344 helix_turn_helix ASNC type J169_00291 SM00382 ATPases associated with a variety of cellular activities J169_00294 SM00382 ATPases associated with a variety of cellular activities J169_00300 SM00530 Helix-turn-helix XRE-family like proteins J169_00305 SM00855 Phosphoglycerate mutase family J169_00306 SM00867 YceI-like domain J169_00307 SM00155 Phospholipase D. Active site motifs. J169_00309 SM00563 Phosphate acyltransferases J169_00312 SM00028 Tetratricopeptide repeats J169_00314 SM00829 Enoylreductase J169_00317 SM01230 J169_00317 J169_00318 SM00938 Nitrogen regulatory protein P-II J169_00320 SM00387 Histidine kinase-like ATPases J169_00320 SM00388 His Kinase A (phosphoacceptor) domain J169_00321 SM00382 ATPases associated with a variety of cellular activities J169_00321 SM00448 cheY-homologous receiver domain J169_00333 SM00450 Rhodanese Homology Domain J169_00338 SM00387 Histidine kinase-like ATPases J169_00338 SM00388 His Kinase A (phosphoacceptor) domain J169_00339 SM00382 ATPases associated with a variety of cellular activities J169_00339 SM00448 cheY-homologous receiver domain J169_00361 SM00563 Phosphate acyltransferases J169_00367 SM00342 helix_turn_helix, arabinose operon control protein J169_00372 SM00100 Cyclic nucleotide-monophosphate binding domain J169_00372 SM00267 diguanylate cyclase J169_00378 SM00878 Biotin carboxylase C-terminal domain J169_00383 SM00953 J169_00383 J169_00391 SM00833 Cobalamin synthesis protein cobW C-terminal domain J169_00396 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_00402 SM00829 Enoylreductase J169_00408 SM00487 DEAD-like helicases superfamily J169_00408 SM00490 helicase superfamily c-terminal domain J169_00408 SM00847 Helicase associated domain (HA2) Add an annotation J169_00433 SM00422 helix_turn_helix, mercury resistance J169_00440 SM00448 cheY-homologous receiver domain J169_00440 SM00862 Transcriptional regulatory protein, C terminal J169_00441 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_00441 SM00387 Histidine kinase-like ATPases J169_00441 SM00388 His Kinase A (phosphoacceptor) domain J169_00467 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_00468 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_00472 SM00342 helix_turn_helix, arabinose operon control protein J169_00479 SM00420 helix_turn_helix, Deoxyribose operon repressor J169_00479 SM01134 J169_00479 J169_00482 SM00882 Coenzyme A transferase J169_00483 SM00882 Coenzyme A transferase J169_00487 SM00998 Adenylosuccinate lyase C-terminus J169_00491 SM00346 helix_turn_helix isocitrate lyase regulation J169_00492 SM00090 RIO-like kinase J169_00495 SM01228 J169_00495 J169_00506 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_00506 SM00876 Biotin and Thiamin Synthesis associated domain J169_00511 SM00369 Leucine-rich repeats, typical (most populated) subfamily J169_00531 SM00382 ATPases associated with a variety of cellular activities J169_00543 SM00267 diguanylate cyclase J169_00545 SM00642 Alpha-amylase domain J169_00546 SM00642 Alpha-amylase domain J169_00548 SM00642 Alpha-amylase domain J169_00550 SM00642 Alpha-amylase domain J169_00559 SM00822 J169_00559 J169_00561 SM00487 DEAD-like helicases superfamily J169_00561 SM00490 helicase superfamily c-terminal domain J169_00564 SM00326 Src homology 3 domains J169_00565 SM00861 Transketolase, pyrimidine binding domain J169_00567 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J169_00571 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_00590 SM00271 DnaJ molecular chaperone homology domain J169_00594 SM00046 Diacylglycerol kinase catalytic domain (presumed) J169_00598 SM00903 Flavin reductase like domain J169_00602 SM00100 Cyclic nucleotide-monophosphate binding domain J169_00602 SM00419 helix_turn_helix, cAMP Regulatory protein J169_00612 SM00387 Histidine kinase-like ATPases J169_00612 SM00388 His Kinase A (phosphoacceptor) domain J169_00612 SM00448 cheY-homologous receiver domain J169_00613 SM00052 Putative diguanylate phosphodiesterase J169_00613 SM00267 diguanylate cyclase J169_00613 SM00448 cheY-homologous receiver domain J169_00624 SM00563 Phosphate acyltransferases J169_00628 SM01209 J169_00628 J169_00628 SM01210 J169_00628 J169_00630 SM00798 AICARFT/IMPCHase bienzyme J169_00630 SM00851 MGS-like domain J169_00633 SM00195 Dual specificity phosphatase, catalytic domain J169_00637 SM00563 Phosphate acyltransferases J169_00642 SM00530 Helix-turn-helix XRE-family like proteins J169_00647 SM00878 Biotin carboxylase C-terminal domain J169_00653 SM00342 helix_turn_helix, arabinose operon control protein J169_00655 SM00234 in StAR and phosphatidylcholine transfer protein J169_00659 SM00883 Chaperonin 10 Kd subunit J169_00670 SM00944 Pro-kumamolisin, activation domain J169_00673 SM00867 YceI-like domain J169_00684 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J169_00686 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_00686 SM00895 J169_00686 J169_00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_00690 SM00331 Sigma factor PP2C-like phosphatases J169_00698 SM00342 helix_turn_helix, arabinose operon control protein J169_00710 SM00267 diguanylate cyclase J169_00715 SM00062 Bacterial periplasmic substrate-binding proteins J169_00724 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J169_00724 SM01232 J169_00724 J169_00726 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_00729 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_00729 SM00091 PAS domain J169_00729 SM00267 diguanylate cyclase J169_00730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_00730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_00730 SM01049 J169_00730 J169_00731 SM00637 J169_00731 J169_00733 SM00267 diguanylate cyclase J169_00739 SM00448 cheY-homologous receiver domain J169_00739 SM00850 LytTr DNA-binding domain J169_00755 SM00382 ATPases associated with a variety of cellular activities J169_00755 SM01086 C-terminal, D2-small domain, of ClpB protein J169_00761 SM00267 diguanylate cyclase J169_00762 SM01263 J169_00762 J169_00765 SM00564 beta-propeller repeat J169_00766 SM00062 Bacterial periplasmic substrate-binding proteins J169_00766 SM00248 ankyrin repeats J169_00769 SM00829 Enoylreductase J169_00771 SM00382 ATPases associated with a variety of cellular activities J169_00773 SM00268 Actin J169_00778 SM00710 Parallel beta-helix repeats J169_00781 SM00936 Penicillin-binding protein 5, C-terminal domain J169_00785 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_00786 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_00786 SM00245 tail specific protease J169_00797 SM01350 J169_00797 J169_00799 SM00749 bacterial OsmY and nodulation domain J169_00800 SM00387 Histidine kinase-like ATPases J169_00800 SM00388 His Kinase A (phosphoacceptor) domain J169_00801 SM00448 cheY-homologous receiver domain J169_00802 SM00387 Histidine kinase-like ATPases J169_00802 SM00388 His Kinase A (phosphoacceptor) domain J169_00802 SM00448 cheY-homologous receiver domain J169_00808 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J169_00813 SM00382 ATPases associated with a variety of cellular activities J169_00829 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_00829 SM00866 J169_00829 J169_00831 SM00354 helix_turn _helix lactose operon repressor J169_00845 SM00849 Metallo-beta-lactamase superfamily J169_00846 SM00342 helix_turn_helix, arabinose operon control protein J169_00848 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_00848 SM00387 Histidine kinase-like ATPases J169_00848 SM00388 His Kinase A (phosphoacceptor) domain J169_00849 SM00448 cheY-homologous receiver domain J169_00849 SM00862 Transcriptional regulatory protein, C terminal J169_00853 SM00829 Enoylreductase J169_00856 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_00860 SM00382 ATPases associated with a variety of cellular activities J169_00873 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J169_00879 SM00387 Histidine kinase-like ATPases J169_00879 SM00388 His Kinase A (phosphoacceptor) domain J169_00880 SM00448 cheY-homologous receiver domain J169_00880 SM00862 Transcriptional regulatory protein, C terminal J169_00904 SM00842 Cell division protein FtsA J169_00905 SM00864 Tubulin/FtsZ family, GTPase domain J169_00905 SM00865 Tubulin/FtsZ family, C-terminal domain J169_00909 SM00957 SecA DEAD-like domain J169_00909 SM00958 SecA preprotein cross-linking domain J169_00915 SM00829 Enoylreductase J169_00916 SM00944 Pro-kumamolisin, activation domain J169_00919 SM00642 Alpha-amylase domain J169_00926 SM00996 S-adenosyl-L-homocysteine hydrolase J169_00926 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J169_00951 SM00382 ATPases associated with a variety of cellular activities J169_00955 SM00382 ATPases associated with a variety of cellular activities J169_00957 SM00448 cheY-homologous receiver domain J169_00957 SM00862 Transcriptional regulatory protein, C terminal J169_00958 SM00387 Histidine kinase-like ATPases J169_00958 SM00388 His Kinase A (phosphoacceptor) domain J169_00968 SM00382 ATPases associated with a variety of cellular activities J169_00970 SM00382 ATPases associated with a variety of cellular activities J169_00983 SM00382 ATPases associated with a variety of cellular activities J169_00986 SM00650 Ribosomal RNA adenine dimethylases J169_00991 SM00108 Bulb-type mannose-specific lectin J169_01000 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_01000 SM00895 J169_01000 J169_01007 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_01019 SM00448 cheY-homologous receiver domain J169_01020 SM00387 Histidine kinase-like ATPases J169_01020 SM00388 His Kinase A (phosphoacceptor) domain J169_01020 SM00448 cheY-homologous receiver domain J169_01021 SM00421 helix_turn_helix, Lux Regulon J169_01034 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J169_01034 SM00475 5'-3' exonuclease J169_01040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J169_01040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J169_01064 SM00852 Probable molybdopterin binding domain J169_01065 SM00028 Tetratricopeptide repeats J169_01066 SM00937 J169_01066 J169_01068 SM00028 Tetratricopeptide repeats J169_01072 SM01400 J169_01072 J169_01082 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J169_01082 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J169_01083 SM00649 Ribosomal protein L11/L12 J169_01089 SM00663 RNA polymerase I subunit A N-terminus J169_01092 SM00838 Elongation factor G C-terminus J169_01092 SM00889 Elongation factor G, domain IV J169_01094 SM01403 J169_01094 J169_01098 SM01382 J169_01098 J169_01098 SM01383 J169_01098 J169_01101 SM00322 K homology RNA-binding domain J169_01105 SM01374 J169_01105 J169_01106 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J169_01118 SM00363 S4 RNA-binding domain J169_01118 SM01390 J169_01118 J169_01119 SM00662 RNA polymerases D J169_01127 SM00838 Elongation factor G C-terminus J169_01133 SM00829 Enoylreductase J169_01142 SM00382 ATPases associated with a variety of cellular activities J169_01144 SM00829 Enoylreductase J169_01149 SM00855 Phosphoglycerate mutase family J169_01160 SM00014 Acid phosphatase homologues J169_01164 SM00091 PAS domain J169_01164 SM00387 Histidine kinase-like ATPases J169_01164 SM00388 His Kinase A (phosphoacceptor) domain J169_01165 SM00448 cheY-homologous receiver domain J169_01165 SM00862 Transcriptional regulatory protein, C terminal J169_01169 SM01329 J169_01169 J169_01203 SM00387 Histidine kinase-like ATPases J169_01204 SM00091 PAS domain J169_01208 SM00382 ATPases associated with a variety of cellular activities J169_01208 SM00994 ClpX C4-type zinc finger J169_01208 SM01086 C-terminal, D2-small domain, of ClpB protein J169_01209 SM00382 ATPases associated with a variety of cellular activities J169_01209 SM00464 Found in ATP-dependent protease La (LON) J169_01210 SM00411 bacterial (prokaryotic) histone like domain J169_01216 SM00257 Lysin motif J169_01217 SM00849 Metallo-beta-lactamase superfamily J169_01220 SM00479 J169_01220 J169_01221 SM00331 Sigma factor PP2C-like phosphatases J169_01221 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J169_01226 SM00849 Metallo-beta-lactamase superfamily J169_01227 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_01240 SM00382 ATPases associated with a variety of cellular activities J169_01242 SM00493 J169_01242 J169_01245 SM00460 Transglutaminase/protease-like homologues J169_01247 SM00382 ATPases associated with a variety of cellular activities J169_01256 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J169_01257 SM00822 J169_01257 J169_01259 SM00825 Beta-ketoacyl synthase J169_01266 SM00382 ATPases associated with a variety of cellular activities J169_01275 SM01359 J169_01275 J169_01275 SM01360 J169_01275 J169_01282 SM00271 DnaJ molecular chaperone homology domain J169_01284 SM00448 cheY-homologous receiver domain J169_01286 SM00244 prohibitin homologues J169_01287 SM00244 prohibitin homologues J169_01288 SM01321 J169_01288 J169_01289 SM00788 Adenylosuccinate synthetase J169_01292 SM00822 J169_01292 J169_01302 SM00220 Serine/Threonine protein kinases, catalytic domain J169_01306 SM00855 Phosphoglycerate mutase family J169_01317 SM00052 Putative diguanylate phosphodiesterase J169_01318 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_01320 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J169_01321 SM01092 CO dehydrogenase flavoprotein C-terminal domain J169_01324 SM00974 J169_01324 J169_01328 SM00966 SpoVT / AbrB like domain J169_01332 SM00481 DNA polymerase alpha chain like domain J169_01334 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_01341 SM00091 PAS domain J169_01341 SM00342 helix_turn_helix, arabinose operon control protein J169_01346 SM01060 J169_01346 J169_01358 SM00448 cheY-homologous receiver domain J169_01358 SM00862 Transcriptional regulatory protein, C terminal J169_01359 SM00387 Histidine kinase-like ATPases J169_01359 SM00388 His Kinase A (phosphoacceptor) domain J169_01366 SM00421 helix_turn_helix, Lux Regulon J169_01366 SM00448 cheY-homologous receiver domain J169_01369 SM00478 endonuclease III J169_01373 SM00244 prohibitin homologues J169_01391 SM00904 Riboflavin kinase J169_01400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_01401 SM00382 ATPases associated with a variety of cellular activities J169_01403 SM00862 Transcriptional regulatory protein, C terminal J169_01404 SM00342 helix_turn_helix, arabinose operon control protein J169_01411 SM00387 Histidine kinase-like ATPases J169_01411 SM00388 His Kinase A (phosphoacceptor) domain J169_01412 SM00387 Histidine kinase-like ATPases J169_01412 SM00388 His Kinase A (phosphoacceptor) domain J169_01412 SM00448 cheY-homologous receiver domain J169_01417 SM00387 Histidine kinase-like ATPases J169_01417 SM00388 His Kinase A (phosphoacceptor) domain J169_01417 SM00448 cheY-homologous receiver domain J169_01419 SM00138 Methyltransferase, chemotaxis proteins J169_01420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_01420 SM00387 Histidine kinase-like ATPases J169_01420 SM00388 His Kinase A (phosphoacceptor) domain J169_01420 SM00448 cheY-homologous receiver domain J169_01421 SM00091 PAS domain J169_01421 SM00387 Histidine kinase-like ATPases J169_01421 SM00388 His Kinase A (phosphoacceptor) domain J169_01422 SM00448 cheY-homologous receiver domain J169_01424 SM00813 Alpha-L-arabinofuranosidase C-terminus J169_01427 SM00382 ATPases associated with a variety of cellular activities J169_01427 SM00962 SRP54-type protein, GTPase domain J169_01427 SM00963 SRP54-type protein, helical bundle domain J169_01441 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J169_01441 SM00534 ATPase domain of DNA mismatch repair MUTS family J169_01446 SM00812 Alpha-L-fucosidase J169_01451 SM00530 Helix-turn-helix XRE-family like proteins J169_01461 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_01462 SM00838 Elongation factor G C-terminus J169_01465 SM00358 Double-stranded RNA binding motif J169_01465 SM00535 Ribonuclease III family J169_01468 SM00448 cheY-homologous receiver domain J169_01470 SM01118 J169_01470 J169_01477 SM00357 Cold shock protein domain J169_01480 SM00487 DEAD-like helicases superfamily J169_01480 SM00490 helicase superfamily c-terminal domain J169_01486 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_01486 SM00267 diguanylate cyclase J169_01490 SM00869 Autotransporter beta-domain J169_01491 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J169_01492 SM00671 Sel1-like repeats. J169_01492 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J169_01531 SM00382 ATPases associated with a variety of cellular activities J169_01548 SM00481 DNA polymerase alpha chain like domain J169_01556 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_01562 SM00267 diguanylate cyclase J169_01567 SM00972 Spore Coat Protein U domain J169_01570 SM00972 Spore Coat Protein U domain J169_01572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_01576 SM01172 J169_01576 J169_01577 SM00710 Parallel beta-helix repeats J169_01577 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J169_01584 SM00434 DNA Topoisomerase IV J169_01585 SM00342 helix_turn_helix, arabinose operon control protein J169_01586 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_01591 SM01217 J169_01591 J169_01592 SM00631 J169_01592 J169_01598 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_01602 SM00382 ATPases associated with a variety of cellular activities J169_01605 SM00947 Carbonic anhydrase J169_01608 SM00357 Cold shock protein domain J169_01631 SM00267 diguanylate cyclase J169_01633 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_01633 SM00267 diguanylate cyclase J169_01669 SM00271 DnaJ molecular chaperone homology domain J169_01679 SM00382 ATPases associated with a variety of cellular activities J169_01684 SM00861 Transketolase, pyrimidine binding domain J169_01686 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J169_01690 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_01690 SM01091 Transporter associated domain J169_01696 SM00382 ATPases associated with a variety of cellular activities J169_01697 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_01701 SM00984 UDP binding domain J169_01705 SM00354 helix_turn _helix lactose operon repressor J169_01709 SM01018 B12 binding domain J169_01711 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J169_01715 SM00316 Ribosomal protein S1-like RNA-binding domain J169_01715 SM00357 Cold shock protein domain J169_01715 SM00955 J169_01715 J169_01717 SM00967 RNA 2'-O ribose methyltransferase substrate binding J169_01718 SM00267 diguanylate cyclase J169_01719 SM00479 J169_01719 J169_01722 SM00382 ATPases associated with a variety of cellular activities J169_01729 SM00947 Carbonic anhydrase J169_01731 SM00478 endonuclease III J169_01736 SM00450 Rhodanese Homology Domain J169_01738 SM00644 J169_01738 J169_01742 SM00382 ATPases associated with a variety of cellular activities J169_01743 SM00981 J169_01743 J169_01748 SM00479 J169_01748 J169_01753 SM00947 Carbonic anhydrase J169_01762 SM00421 helix_turn_helix, Lux Regulon J169_01762 SM00448 cheY-homologous receiver domain J169_01774 SM00968 SMC proteins Flexible Hinge Domain J169_01775 SM00771 ZipA, C-terminal domain (FtsZ-binding) J169_01778 SM00292 breast cancer carboxy-terminal domain J169_01778 SM00532 Ligase N family J169_01782 SM00434 DNA Topoisomerase IV J169_01783 SM00564 beta-propeller repeat J169_01790 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_01790 SM00866 J169_01790 J169_01795 SM00240 Forkhead associated domain J169_01799 SM00830 Chorismate mutase type II J169_01816 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_01816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_01818 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_01819 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_01819 SM00091 PAS domain J169_01819 SM00387 Histidine kinase-like ATPases J169_01819 SM00388 His Kinase A (phosphoacceptor) domain J169_01819 SM00448 cheY-homologous receiver domain J169_01820 SM00448 cheY-homologous receiver domain J169_01821 SM00382 ATPases associated with a variety of cellular activities J169_01822 SM00091 PAS domain J169_01822 SM00387 Histidine kinase-like ATPases J169_01822 SM00388 His Kinase A (phosphoacceptor) domain J169_01822 SM00448 cheY-homologous receiver domain J169_01853 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_01855 SM00382 ATPases associated with a variety of cellular activities J169_01860 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_01860 SM01091 Transporter associated domain J169_01865 SM00387 Histidine kinase-like ATPases J169_01865 SM00433 TopoisomeraseII J169_01870 SM01192 J169_01870 J169_01870 SM01193 J169_01870 J169_01875 SM00463 Small MutS-related domain J169_01879 SM00257 Lysin motif J169_01882 SM01103 J169_01882 J169_01884 SM00382 ATPases associated with a variety of cellular activities J169_01892 SM00382 ATPases associated with a variety of cellular activities J169_01894 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J169_01897 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_01897 SM00091 PAS domain J169_01897 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_01907 SM00670 Large family of predicted nucleotide-binding domains J169_01911 SM01130 J169_01911 J169_01916 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J169_01925 SM00758 J169_01925 J169_01932 SM00646 J169_01932 J169_01948 SM00052 Putative diguanylate phosphodiesterase J169_01948 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_01948 SM00267 diguanylate cyclase J169_01950 SM00448 cheY-homologous receiver domain J169_01951 SM00387 Histidine kinase-like ATPases J169_01953 SM00014 Acid phosphatase homologues J169_01968 SM00912 haemagglutination activity domain J169_01978 SM00100 Cyclic nucleotide-monophosphate binding domain J169_01978 SM00419 helix_turn_helix, cAMP Regulatory protein J169_01993 SM01007 Class II Aldolase and Adducin N-terminal domain J169_02002 SM00841 Elongation factor P, C-terminal J169_02002 SM01185 J169_02002 J169_02003 SM00822 J169_02003 J169_02007 SM00899 J169_02007 J169_02014 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J169_02016 SM00851 MGS-like domain J169_02016 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J169_02027 SM00850 LytTr DNA-binding domain J169_02028 SM00937 J169_02028 J169_02030 SM00448 cheY-homologous receiver domain J169_02030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_02031 SM00073 Histidine Phosphotransfer domain J169_02031 SM00387 Histidine kinase-like ATPases J169_02031 SM00388 His Kinase A (phosphoacceptor) domain J169_02031 SM00448 cheY-homologous receiver domain J169_02036 SM00966 SpoVT / AbrB like domain J169_02040 SM00052 Putative diguanylate phosphodiesterase J169_02040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_02040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02040 SM00091 PAS domain J169_02040 SM00267 diguanylate cyclase J169_02041 SM00448 cheY-homologous receiver domain J169_02043 SM00138 Methyltransferase, chemotaxis proteins J169_02044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02048 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02048 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02049 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02049 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02052 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02052 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02053 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02053 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02053 SM01049 J169_02053 J169_02055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02056 SM00073 Histidine Phosphotransfer domain J169_02056 SM00260 Two component signalling adaptor domain J169_02056 SM00387 Histidine kinase-like ATPases J169_02056 SM01231 J169_02056 J169_02057 SM00448 cheY-homologous receiver domain J169_02059 SM00260 Two component signalling adaptor domain J169_02065 SM00220 Serine/Threonine protein kinases, catalytic domain J169_02079 SM00530 Helix-turn-helix XRE-family like proteins J169_02084 SM00073 Histidine Phosphotransfer domain J169_02084 SM00260 Two component signalling adaptor domain J169_02084 SM00387 Histidine kinase-like ATPases J169_02084 SM01231 J169_02084 J169_02086 SM00448 cheY-homologous receiver domain J169_02089 SM00382 ATPases associated with a variety of cellular activities J169_02089 SM00962 SRP54-type protein, GTPase domain J169_02092 SM00052 Putative diguanylate phosphodiesterase J169_02092 SM00267 diguanylate cyclase J169_02093 SM00267 diguanylate cyclase J169_02094 SM00267 diguanylate cyclase J169_02105 SM00382 ATPases associated with a variety of cellular activities J169_02116 SM00822 J169_02116 J169_02121 SM00382 ATPases associated with a variety of cellular activities J169_02122 SM00448 cheY-homologous receiver domain J169_02124 SM00421 helix_turn_helix, Lux Regulon J169_02124 SM00448 cheY-homologous receiver domain J169_02132 SM00047 Lysozyme subfamily 2 J169_02141 SM00260 Two component signalling adaptor domain J169_02141 SM00448 cheY-homologous receiver domain J169_02142 SM00858 J169_02142 J169_02145 SM00387 Histidine kinase-like ATPases J169_02146 SM00052 Putative diguanylate phosphodiesterase J169_02146 SM00267 diguanylate cyclase J169_02146 SM00448 cheY-homologous receiver domain J169_02147 SM00091 PAS domain J169_02147 SM00387 Histidine kinase-like ATPases J169_02148 SM00052 Putative diguanylate phosphodiesterase J169_02148 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02148 SM00091 PAS domain J169_02148 SM00267 diguanylate cyclase J169_02150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02155 SM00382 ATPases associated with a variety of cellular activities J169_02155 SM01086 C-terminal, D2-small domain, of ClpB protein J169_02156 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02160 SM00382 ATPases associated with a variety of cellular activities J169_02160 SM00843 J169_02160 J169_02164 SM00382 ATPases associated with a variety of cellular activities J169_02171 SM00562 J169_02171 J169_02173 SM00028 Tetratricopeptide repeats J169_02176 SM00564 beta-propeller repeat J169_02177 SM00382 ATPases associated with a variety of cellular activities J169_02178 SM00852 Probable molybdopterin binding domain J169_02179 SM00450 Rhodanese Homology Domain J169_02188 SM00852 Probable molybdopterin binding domain J169_02193 SM00529 Helix-turn-helix diphteria tox regulatory element J169_02195 SM00479 J169_02195 J169_02209 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02209 SM00732 Likely ribonuclease with RNase H fold. J169_02210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_02210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02210 SM00091 PAS domain J169_02210 SM00387 Histidine kinase-like ATPases J169_02210 SM00388 His Kinase A (phosphoacceptor) domain J169_02210 SM00448 cheY-homologous receiver domain J169_02211 SM00448 cheY-homologous receiver domain J169_02228 SM00382 ATPases associated with a variety of cellular activities J169_02239 SM00382 ATPases associated with a variety of cellular activities J169_02241 SM00849 Metallo-beta-lactamase superfamily J169_02244 SM00382 ATPases associated with a variety of cellular activities J169_02247 SM00226 Low molecular weight phosphatase family J169_02249 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J169_02249 SM00465 GIY-YIG type nucleases (URI domain) J169_02255 SM00823 Phosphopantetheine attachment site J169_02262 SM00984 UDP binding domain J169_02266 SM00450 Rhodanese Homology Domain J169_02267 SM00421 helix_turn_helix, Lux Regulon J169_02267 SM00448 cheY-homologous receiver domain J169_02268 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02269 SM00363 S4 RNA-binding domain J169_02277 SM01034 Sensors of blue-light using FAD J169_02298 SM00448 cheY-homologous receiver domain J169_02298 SM00850 LytTr DNA-binding domain J169_02301 SM00869 Autotransporter beta-domain J169_02305 SM00387 Histidine kinase-like ATPases J169_02305 SM00388 His Kinase A (phosphoacceptor) domain J169_02306 SM00421 helix_turn_helix, Lux Regulon J169_02306 SM00448 cheY-homologous receiver domain J169_02307 SM00869 Autotransporter beta-domain J169_02308 SM00052 Putative diguanylate phosphodiesterase J169_02313 SM01012 J169_02313 J169_02322 SM00342 helix_turn_helix, arabinose operon control protein J169_02323 SM00387 Histidine kinase-like ATPases J169_02324 SM00421 helix_turn_helix, Lux Regulon J169_02324 SM00448 cheY-homologous receiver domain J169_02325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02332 SM00530 Helix-turn-helix XRE-family like proteins J169_02346 SM00966 SpoVT / AbrB like domain J169_02351 SM00965 Secretin and TonB N terminus short domain J169_02356 SM00736 Dystroglycan-type cadherin-like domains. J169_02361 SM00382 ATPases associated with a variety of cellular activities J169_02372 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J169_02372 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J169_02397 SM00342 helix_turn_helix, arabinose operon control protein J169_02406 SM00487 DEAD-like helicases superfamily J169_02457 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_02457 SM01240 J169_02457 J169_02462 SM00822 J169_02462 J169_02464 SM00028 Tetratricopeptide repeats J169_02466 SM00411 bacterial (prokaryotic) histone like domain J169_02467 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02483 SM00354 helix_turn _helix lactose operon repressor J169_02488 SM00363 S4 RNA-binding domain J169_02493 SM00382 ATPases associated with a variety of cellular activities J169_02503 SM00357 Cold shock protein domain J169_02504 SM00382 ATPases associated with a variety of cellular activities J169_02505 SM00382 ATPases associated with a variety of cellular activities J169_02511 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J169_02513 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J169_02516 SM00859 Semialdehyde dehydrogenase, NAD binding domain J169_02524 SM00840 J169_02524 J169_02528 SM01234 J169_02528 J169_02536 SM00849 Metallo-beta-lactamase superfamily J169_02541 SM00656 J169_02541 J169_02549 SM00841 Elongation factor P, C-terminal J169_02549 SM01185 J169_02549 J169_02551 SM00052 Putative diguanylate phosphodiesterase J169_02551 SM00267 diguanylate cyclase J169_02551 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02558 SM00382 ATPases associated with a variety of cellular activities J169_02559 SM00487 DEAD-like helicases superfamily J169_02559 SM00490 helicase superfamily c-terminal domain J169_02564 SM00357 Cold shock protein domain J169_02565 SM01322 J169_02565 J169_02567 SM00052 Putative diguanylate phosphodiesterase J169_02567 SM00267 diguanylate cyclase J169_02570 SM00822 J169_02570 J169_02574 SM00853 MutL C terminal dimerisation domain J169_02574 SM01340 J169_02574 J169_02575 SM00646 J169_02575 J169_02582 SM00474 3'-5' exonuclease J169_02586 SM00528 Domain in histone-like proteins of HNS family J169_02604 SM00857 Resolvase, N terminal domain J169_02619 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_02619 SM00267 diguanylate cyclase J169_02620 SM00260 Two component signalling adaptor domain J169_02621 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_02621 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02623 SM00487 DEAD-like helicases superfamily J169_02623 SM00490 helicase superfamily c-terminal domain J169_02634 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_02639 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_02639 SM01091 Transporter associated domain J169_02645 SM00382 ATPases associated with a variety of cellular activities J169_02651 SM01230 J169_02651 J169_02653 SM01230 J169_02653 J169_02655 SM00267 diguanylate cyclase J169_02655 SM00448 cheY-homologous receiver domain J169_02665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02665 SM00091 PAS domain J169_02665 SM00387 Histidine kinase-like ATPases J169_02665 SM00388 His Kinase A (phosphoacceptor) domain J169_02665 SM00448 cheY-homologous receiver domain J169_02665 SM01079 J169_02665 J169_02666 SM00448 cheY-homologous receiver domain J169_02666 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_02672 SM00354 helix_turn _helix lactose operon repressor J169_02685 SM01323 J169_02685 J169_02688 SM00344 helix_turn_helix ASNC type J169_02703 SM00387 Histidine kinase-like ATPases J169_02713 SM00944 Pro-kumamolisin, activation domain J169_02724 SM01130 J169_02724 J169_02729 SM00342 helix_turn_helix, arabinose operon control protein J169_02730 SM00382 ATPases associated with a variety of cellular activities J169_02730 SM00962 SRP54-type protein, GTPase domain J169_02730 SM00963 SRP54-type protein, helical bundle domain J169_02731 SM00478 endonuclease III J169_02733 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02733 SM00091 PAS domain J169_02733 SM00387 Histidine kinase-like ATPases J169_02733 SM00388 His Kinase A (phosphoacceptor) domain J169_02733 SM00448 cheY-homologous receiver domain J169_02736 SM00465 GIY-YIG type nucleases (URI domain) J169_02742 SM00507 HNH nucleases J169_02743 SM00861 Transketolase, pyrimidine binding domain J169_02748 SM00849 Metallo-beta-lactamase superfamily J169_02765 SM00422 helix_turn_helix, mercury resistance J169_02766 SM00411 bacterial (prokaryotic) histone like domain J169_02767 SM00873 B3/4 domain J169_02767 SM00874 tRNA synthetase B5 domain J169_02767 SM00896 Ferredoxin-fold anticodon binding domain J169_02773 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J169_02774 SM00354 helix_turn _helix lactose operon repressor J169_02775 SM00642 Alpha-amylase domain J169_02782 SM00642 Alpha-amylase domain J169_02793 SM00382 ATPases associated with a variety of cellular activities J169_02805 SM00487 DEAD-like helicases superfamily J169_02805 SM00490 helicase superfamily c-terminal domain J169_02857 SM01001 AIR carboxylase J169_02861 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02861 SM00322 K homology RNA-binding domain J169_02862 SM01387 J169_02862 J169_02866 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02866 SM00322 K homology RNA-binding domain J169_02876 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J169_02877 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J169_02886 SM00822 J169_02886 J169_02889 SM00052 Putative diguanylate phosphodiesterase J169_02889 SM00267 diguanylate cyclase J169_02889 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02903 SM00859 Semialdehyde dehydrogenase, NAD binding domain J169_02909 SM00257 Lysin motif J169_02915 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_02928 SM01160 J169_02928 J169_02939 SM00098 Alkaline phosphatase homologues J169_02940 SM00977 TilS substrate C-terminal domain J169_02943 SM01351 J169_02943 J169_02950 SM00316 Ribosomal protein S1-like RNA-binding domain J169_02976 SM00382 ATPases associated with a variety of cellular activities J169_02983 SM00448 cheY-homologous receiver domain J169_02983 SM00862 Transcriptional regulatory protein, C terminal J169_02984 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_02984 SM00387 Histidine kinase-like ATPases J169_02984 SM00388 His Kinase A (phosphoacceptor) domain J169_02990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_02990 SM00267 diguanylate cyclase J169_02991 SM00363 S4 RNA-binding domain J169_02992 SM00052 Putative diguanylate phosphodiesterase J169_02992 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_02992 SM00091 PAS domain J169_02992 SM00267 diguanylate cyclase J169_02993 SM00487 DEAD-like helicases superfamily J169_02993 SM00490 helicase superfamily c-terminal domain J169_03002 SM00342 helix_turn_helix, arabinose operon control protein J169_03002 SM00478 endonuclease III J169_03002 SM01009 AlkA N-terminal domain J169_03006 SM00829 Enoylreductase J169_03020 SM00342 helix_turn_helix, arabinose operon control protein J169_03034 SM00645 Papain family cysteine protease J169_03035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_03035 SM00387 Histidine kinase-like ATPases J169_03035 SM00388 His Kinase A (phosphoacceptor) domain J169_03036 SM00448 cheY-homologous receiver domain J169_03036 SM00862 Transcriptional regulatory protein, C terminal J169_03039 SM00487 DEAD-like helicases superfamily J169_03039 SM00490 helicase superfamily c-terminal domain J169_03039 SM00982 J169_03039 J169_03039 SM01058 CarD-like/TRCF domain J169_03046 SM00073 Histidine Phosphotransfer domain J169_03046 SM00260 Two component signalling adaptor domain J169_03046 SM00387 Histidine kinase-like ATPases J169_03046 SM01231 J169_03046 J169_03047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_03048 SM00260 Two component signalling adaptor domain J169_03049 SM00052 Putative diguanylate phosphodiesterase J169_03049 SM00448 cheY-homologous receiver domain J169_03050 SM00138 Methyltransferase, chemotaxis proteins J169_03051 SM00448 cheY-homologous receiver domain J169_03052 SM00155 Phospholipase D. Active site motifs. J169_03055 SM00855 Phosphoglycerate mutase family J169_03065 SM00248 ankyrin repeats J169_03075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J169_03076 SM01092 CO dehydrogenase flavoprotein C-terminal domain J169_03078 SM00829 Enoylreductase J169_03079 SM00267 diguanylate cyclase J169_03080 SM00487 DEAD-like helicases superfamily J169_03100 SM00732 Likely ribonuclease with RNase H fold. J169_03107 SM00382 ATPases associated with a variety of cellular activities J169_03110 SM00411 bacterial (prokaryotic) histone like domain J169_03116 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J169_03119 SM00382 ATPases associated with a variety of cellular activities J169_03125 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J169_03126 SM00671 Sel1-like repeats. J169_03132 SM00054 EF-hand, calcium binding motif J169_03150 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_03154 SM00382 ATPases associated with a variety of cellular activities J169_03163 SM00924 MgtE intracellular N domain J169_03169 SM00656 J169_03169 J169_03171 SM00421 helix_turn_helix, Lux Regulon J169_03177 SM00849 Metallo-beta-lactamase superfamily J169_03179 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J169_03183 SM00422 helix_turn_helix, mercury resistance J169_03210 SM00342 helix_turn_helix, arabinose operon control protein J169_03212 SM00387 Histidine kinase-like ATPases J169_03212 SM00388 His Kinase A (phosphoacceptor) domain J169_03212 SM00448 cheY-homologous receiver domain J169_03213 SM00387 Histidine kinase-like ATPases J169_03213 SM00388 His Kinase A (phosphoacceptor) domain J169_03213 SM00448 cheY-homologous receiver domain J169_03215 SM00387 Histidine kinase-like ATPases J169_03215 SM00388 His Kinase A (phosphoacceptor) domain J169_03215 SM00448 cheY-homologous receiver domain J169_03216 SM00867 YceI-like domain J169_03218 SM00867 YceI-like domain J169_03230 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_03236 SM00028 Tetratricopeptide repeats J169_03256 SM00812 Alpha-L-fucosidase J169_03257 SM00636 J169_03257 J169_03260 SM00758 J169_03260 J169_03260 SM01217 J169_03260 J169_03266 SM01149 J169_03266 J169_03273 SM00369 Leucine-rich repeats, typical (most populated) subfamily J169_03277 SM00260 Two component signalling adaptor domain J169_03279 SM00073 Histidine Phosphotransfer domain J169_03279 SM00260 Two component signalling adaptor domain J169_03279 SM00387 Histidine kinase-like ATPases J169_03279 SM00448 cheY-homologous receiver domain J169_03279 SM01231 J169_03279 J169_03280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03281 SM00260 Two component signalling adaptor domain J169_03282 SM00448 cheY-homologous receiver domain J169_03283 SM00448 cheY-homologous receiver domain J169_03288 SM00491 J169_03288 J169_03293 SM00954 Region found in RelA / SpoT proteins J169_03302 SM00382 ATPases associated with a variety of cellular activities J169_03302 SM00487 DEAD-like helicases superfamily J169_03302 SM00490 helicase superfamily c-terminal domain J169_03302 SM00847 Helicase associated domain (HA2) Add an annotation J169_03304 SM00341 Helicase and RNase D C-terminal J169_03304 SM00487 DEAD-like helicases superfamily J169_03304 SM00490 helicase superfamily c-terminal domain J169_03304 SM00956 J169_03304 J169_03306 SM00448 cheY-homologous receiver domain J169_03311 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_03314 SM00448 cheY-homologous receiver domain J169_03315 SM00091 PAS domain J169_03315 SM00911 HWE histidine kinase J169_03326 SM00382 ATPases associated with a variety of cellular activities J169_03329 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J169_03336 SM00834 Putative regulatory protein J169_03345 SM00382 ATPases associated with a variety of cellular activities J169_03365 SM00855 Phosphoglycerate mutase family J169_03377 SM00382 ATPases associated with a variety of cellular activities J169_03377 SM01086 C-terminal, D2-small domain, of ClpB protein J169_03378 SM00382 ATPases associated with a variety of cellular activities J169_03380 SM00062 Bacterial periplasmic substrate-binding proteins J169_03395 SM00564 beta-propeller repeat J169_03396 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03417 SM01126 J169_03417 J169_03419 SM00881 CoA binding domain J169_03421 SM00387 Histidine kinase-like ATPases J169_03421 SM00388 His Kinase A (phosphoacceptor) domain J169_03422 SM00382 ATPases associated with a variety of cellular activities J169_03422 SM00448 cheY-homologous receiver domain J169_03436 SM00387 Histidine kinase-like ATPases J169_03436 SM00388 His Kinase A (phosphoacceptor) domain J169_03437 SM00448 cheY-homologous receiver domain J169_03437 SM00862 Transcriptional regulatory protein, C terminal J169_03440 SM00642 Alpha-amylase domain J169_03441 SM00528 Domain in histone-like proteins of HNS family J169_03443 SM00318 Staphylococcal nuclease homologues J169_03458 SM00387 Histidine kinase-like ATPases J169_03458 SM00388 His Kinase A (phosphoacceptor) domain J169_03459 SM00448 cheY-homologous receiver domain J169_03461 SM00646 J169_03461 J169_03470 SM00530 Helix-turn-helix XRE-family like proteins J169_03474 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_03474 SM00387 Histidine kinase-like ATPases J169_03478 SM00255 Toll - interleukin 1 - resistance J169_03482 SM00869 Autotransporter beta-domain J169_03492 SM00354 helix_turn _helix lactose operon repressor J169_03498 SM00967 RNA 2'-O ribose methyltransferase substrate binding J169_03519 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_03519 SM00387 Histidine kinase-like ATPases J169_03525 SM00506 Appr-1"-p processing enzyme J169_03534 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J169_03539 SM00849 Metallo-beta-lactamase superfamily J169_03542 SM00382 ATPases associated with a variety of cellular activities J169_03554 SM00861 Transketolase, pyrimidine binding domain J169_03557 SM00028 Tetratricopeptide repeats J169_03557 SM00327 von Willebrand factor (vWF) type A domain J169_03558 SM00327 von Willebrand factor (vWF) type A domain J169_03561 SM00382 ATPases associated with a variety of cellular activities J169_03563 SM00965 Secretin and TonB N terminus short domain J169_03574 SM00487 DEAD-like helicases superfamily J169_03574 SM00490 helicase superfamily c-terminal domain J169_03576 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J169_03576 SM00954 Region found in RelA / SpoT proteins J169_03577 SM01409 J169_03577 J169_03578 SM00072 Guanylate kinase homologues. J169_03583 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_03588 SM01011 Aminopeptidase P, N-terminal domain J169_03603 SM00028 Tetratricopeptide repeats J169_03603 SM00382 ATPases associated with a variety of cellular activities J169_03603 SM00421 helix_turn_helix, Lux Regulon J169_03617 SM00464 Found in ATP-dependent protease La (LON) J169_03627 SM00342 helix_turn_helix, arabinose operon control protein J169_03628 SM00862 Transcriptional regulatory protein, C terminal J169_03632 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03638 SM00917 LeuA allosteric (dimerisation) domain J169_03639 SM01329 J169_03639 J169_03643 SM00267 diguanylate cyclase J169_03653 SM00919 Malic enzyme, NAD binding domain J169_03653 SM01274 J169_03653 J169_03656 SM00387 Histidine kinase-like ATPases J169_03656 SM00388 His Kinase A (phosphoacceptor) domain J169_03656 SM00448 cheY-homologous receiver domain J169_03664 SM00421 helix_turn_helix, Lux Regulon J169_03664 SM00448 cheY-homologous receiver domain J169_03666 SM00387 Histidine kinase-like ATPases J169_03666 SM00388 His Kinase A (phosphoacceptor) domain J169_03667 SM00448 cheY-homologous receiver domain J169_03667 SM00862 Transcriptional regulatory protein, C terminal J169_03671 SM00822 J169_03671 J169_03672 SM00354 helix_turn _helix lactose operon repressor J169_03675 SM00642 Alpha-amylase domain J169_03677 SM01154 J169_03677 J169_03684 SM00450 Rhodanese Homology Domain J169_03697 SM00028 Tetratricopeptide repeats J169_03714 SM00345 helix_turn_helix gluconate operon transcriptional repressor J169_03714 SM00866 J169_03714 J169_03726 SM00382 ATPases associated with a variety of cellular activities J169_03731 SM01211 J169_03731 J169_03744 SM00656 J169_03744 J169_03750 SM00528 Domain in histone-like proteins of HNS family J169_03753 SM00382 ATPases associated with a variety of cellular activities J169_03759 SM00882 Coenzyme A transferase J169_03760 SM00882 Coenzyme A transferase J169_03763 SM00984 UDP binding domain J169_03768 SM00893 Electron transfer flavoprotein domain J169_03769 SM00893 Electron transfer flavoprotein domain J169_03783 SM00382 ATPases associated with a variety of cellular activities J169_03786 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_03793 SM00487 DEAD-like helicases superfamily J169_03793 SM00490 helicase superfamily c-terminal domain J169_03800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_03807 SM00825 Beta-ketoacyl synthase J169_03822 SM00382 ATPases associated with a variety of cellular activities J169_03826 SM00382 ATPases associated with a variety of cellular activities J169_03826 SM00387 Histidine kinase-like ATPases J169_03826 SM00448 cheY-homologous receiver domain J169_03829 SM00830 Chorismate mutase type II J169_03831 SM00382 ATPases associated with a variety of cellular activities J169_03845 SM00986 Uracil DNA glycosylase superfamily J169_03845 SM00987 UreE urease accessory protein, C-terminal domain J169_03851 SM00382 ATPases associated with a variety of cellular activities J169_03851 SM00930 J169_03851 J169_03855 SM00387 Histidine kinase-like ATPases J169_03855 SM00388 His Kinase A (phosphoacceptor) domain J169_03855 SM00448 cheY-homologous receiver domain J169_03865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_03865 SM00091 PAS domain J169_03865 SM00387 Histidine kinase-like ATPases J169_03865 SM00388 His Kinase A (phosphoacceptor) domain J169_03865 SM00448 cheY-homologous receiver domain J169_03869 SM01005 Alanine racemase, C-terminal domain J169_03871 SM00344 helix_turn_helix ASNC type J169_03882 SM00382 ATPases associated with a variety of cellular activities J169_03884 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J169_03885 SM00986 Uracil DNA glycosylase superfamily J169_03885 SM00987 UreE urease accessory protein, C-terminal domain J169_03886 SM00729 Elongator protein 3, MiaB family, Radical SAM J169_03899 SM00448 cheY-homologous receiver domain J169_03899 SM00850 LytTr DNA-binding domain J169_03900 SM00387 Histidine kinase-like ATPases J169_03907 SM00091 PAS domain J169_03907 SM00138 Methyltransferase, chemotaxis proteins J169_03907 SM00911 HWE histidine kinase J169_03908 SM00448 cheY-homologous receiver domain J169_03910 SM00382 ATPases associated with a variety of cellular activities J169_03910 SM00448 cheY-homologous receiver domain J169_03921 SM00382 ATPases associated with a variety of cellular activities J169_03936 SM00382 ATPases associated with a variety of cellular activities J169_03937 SM00631 J169_03937 J169_03945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J169_03945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_03946 SM00477 DNA/RNA non-specific endonuclease J169_03946 SM00892 DNA/RNA non-specific endonuclease J169_03977 SM00257 Lysin motif J169_03982 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J169_03982 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J169_03982 SM00493 J169_03982 J169_03993 SM00487 DEAD-like helicases superfamily J169_03993 SM00490 helicase superfamily c-terminal domain J169_04000 SM00986 Uracil DNA glycosylase superfamily J169_04000 SM00987 UreE urease accessory protein, C-terminal domain J169_04001 SM00448 cheY-homologous receiver domain J169_04003 SM00382 ATPases associated with a variety of cellular activities J169_04004 SM00487 DEAD-like helicases superfamily J169_04004 SM00490 helicase superfamily c-terminal domain J169_04006 SM00357 Cold shock protein domain J169_04006 SM00382 ATPases associated with a variety of cellular activities J169_04006 SM00959 Rho termination factor, N-terminal domain J169_04012 SM00487 DEAD-like helicases superfamily J169_04021 SM00257 Lysin motif J169_04027 SM01150 J169_04027 J169_04036 SM00644 J169_04036 J169_04038 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J169_04045 SM01217 J169_04045 J169_04046 SM00905 Dihydroneopterin aldolase J169_04051 SM00400 zinc finger J169_04051 SM00493 J169_04051 J169_04051 SM00766 DNA primase DnaG DnaB-binding J169_04073 SM00363 S4 RNA-binding domain J169_04082 SM00470 ParB-like nuclease domain J169_04086 SM01259 J169_04086 J169_04092 SM00836 DALR anticodon binding domain J169_04092 SM01016 Arginyl tRNA synthetase N terminal dom J169_04098 SM00823 Phosphopantetheine attachment site J169_04098 SM00824 Thioesterase J169_04105 SM00938 Nitrogen regulatory protein P-II J169_04107 SM00382 ATPases associated with a variety of cellular activities J169_04133 SM00052 Putative diguanylate phosphodiesterase J169_04141 SM00244 prohibitin homologues J169_04151 SM00448 cheY-homologous receiver domain J169_04151 SM00862 Transcriptional regulatory protein, C terminal J169_04152 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J169_04152 SM00387 Histidine kinase-like ATPases J169_04152 SM00388 His Kinase A (phosphoacceptor) domain J169_04156 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J169_04165 SM01060 J169_04165 J169_04168 SM00421 helix_turn_helix, Lux Regulon J169_04168 SM00448 cheY-homologous receiver domain J169_04171 SM00382 ATPases associated with a variety of cellular activities J169_04180 SM00849 Metallo-beta-lactamase superfamily J169_04186 SM00960 Roadblock/LC7 domain J169_04199 SM00387 Histidine kinase-like ATPases J169_04199 SM00388 His Kinase A (phosphoacceptor) domain J169_04200 SM00448 cheY-homologous receiver domain J169_04200 SM00862 Transcriptional regulatory protein, C terminal J169_04204 SM00248 ankyrin repeats J169_04205 SM01060 J169_04205 J169_04206 SM00491 J169_04206 J169_04212 SM00477 DNA/RNA non-specific endonuclease J169_04212 SM00892 DNA/RNA non-specific endonuclease J169_04215 SM01004 Delta-aminolevulinic acid dehydratase J169_04223 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J169_04227 SM00382 ATPases associated with a variety of cellular activities J169_04229 SM00530 Helix-turn-helix XRE-family like proteins J169_04237 SM00342 helix_turn_helix, arabinose operon control protein J169_04239 SM00382 ATPases associated with a variety of cellular activities J169_04252 SM00881 CoA binding domain J169_04253 SM00116 Domain in cystathionine beta-synthase and other proteins. J169_04253 SM00924 MgtE intracellular N domain J169_04254 SM01057 Eukaryotic-type carbonic anhydrase J169_04259 SM00248 ankyrin repeats J169_04261 SM00825 Beta-ketoacyl synthase J169_04266 SM00822 J169_04266 J169_04275 SM00563 Phosphate acyltransferases J169_04286 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J169_04286 SM00474 3'-5' exonuclease J169_04286 SM00475 5'-3' exonuclease J169_04286 SM00482 DNA polymerase A domain J169_04289 SM00912 haemagglutination activity domain J169_04293 SM00331 Sigma factor PP2C-like phosphatases J169_04293 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J169_04298 SM00240 Forkhead associated domain J169_04301 SM00028 Tetratricopeptide repeats J169_04303 SM00220 Serine/Threonine protein kinases, catalytic domain J169_04307 SM00965 Secretin and TonB N terminus short domain J169_04309 SM00915 Jacalin-like lectin domain J169_04315 SM00382 ATPases associated with a variety of cellular activities J169_04315 SM01086 C-terminal, D2-small domain, of ClpB protein J169_04323 SM00342 helix_turn_helix, arabinose operon control protein J169_04325 SM01266 J169_04325 J169_04328 SM00155 Phospholipase D. Active site motifs. J169_04357 SM00421 helix_turn_helix, Lux Regulon J169_04357 SM00448 cheY-homologous receiver domain J169_04367 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J169_04371 SM00346 helix_turn_helix isocitrate lyase regulation J169_04373 SM00091 PAS domain J169_04373 SM00387 Histidine kinase-like ATPases J169_04373 SM00388 His Kinase A (phosphoacceptor) domain J169_04373 SM00448 cheY-homologous receiver domain J169_04378 SM00564 beta-propeller repeat J169_04388 SM00382 ATPases associated with a variety of cellular activities J169_04390 SM00836 DALR anticodon binding domain J169_04392 SM00382 ATPases associated with a variety of cellular activities J169_04406 SM00354 helix_turn _helix lactose operon repressor J169_04409 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J169_04411 SM00758 J169_04411 J169_04411 SM01217 J169_04411 J169_04415 SM00612 J169_04415 J169_04422 SM01007 Class II Aldolase and Adducin N-terminal domain J169_04427 SM00633 Glycosyl hydrolase family 10 J169_04430 SM00633 Glycosyl hydrolase family 10 J169_04432 SM00633 Glycosyl hydrolase family 10 J169_04446 SM00829 Enoylreductase J169_04447 SM00563 Phosphate acyltransferases J169_04449 SM00354 helix_turn _helix lactose operon repressor J169_04453 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J169_04461 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_04461 SM00388 His Kinase A (phosphoacceptor) domain J169_04464 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J169_04464 SM01232 J169_04464 J169_04472 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_04472 SM00091 PAS domain J169_04483 SM00347 helix_turn_helix multiple antibiotic resistance protein J169_04490 SM00155 Phospholipase D. Active site motifs. J169_04507 SM00796 Allophanate hydrolase subunit 1 J169_04507 SM00797 Allophanate hydrolase subunit 2 J169_04507 SM00878 Biotin carboxylase C-terminal domain J169_04521 SM00382 ATPases associated with a variety of cellular activities J169_04531 SM00829 Enoylreductase J169_04539 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J169_04539 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J169_04539 SM00091 PAS domain J169_04539 SM00267 diguanylate cyclase J169_04545 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J169_04551 SM00014 Acid phosphatase homologues J169_04553 SM00028 Tetratricopeptide repeats