locus-tag class description J154_00004 PF01527 Transposase J154_00006 PF00239 Resolvase, N terminal domain J154_00006 PF02796 Helix-turn-helix domain of resolvase J154_00019 PF07015 VirC1 protein J154_00023 PF03377 TAL effector repeat J154_00027 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J154_00029 PF02796 Helix-turn-helix domain of resolvase J154_00029 PF00239 Resolvase, N terminal domain J154_00034 PF13700 Domain of unknown function (DUF4158) J154_00034 PF01526 Tn3 transposase DDE domain J154_00037 PF00239 Resolvase, N terminal domain J154_00037 PF02796 Helix-turn-helix domain of resolvase J154_00038 PF03377 TAL effector repeat J154_00042 PF13614 AAA domain J154_00050 PF13406 Transglycosylase SLT domain J154_00051 PF13700 Domain of unknown function (DUF4158) J154_00051 PF01526 Tn3 transposase DDE domain J154_00056 PF01527 Transposase J154_00057 PF03377 TAL effector repeat J154_00061 PF07015 VirC1 protein J154_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J154_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J154_00074 PF08751 TrwC relaxase J154_00074 PF07057 DNA helicase TraI J154_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J154_00074 PF07057 DNA helicase TraI J154_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J154_00074 PF08751 TrwC relaxase J154_00079 PF01464 Transglycosylase SLT domain J154_00080 PF00437 Type II/IV secretion system protein J154_00081 PF03743 Bacterial conjugation TrbI-like protein J154_00082 PF03524 Conjugal transfer protein J154_00094 PF01527 Transposase J154_00097 PF06613 KorB C-terminal beta-barrel domain J154_00097 PF02195 ParB-like nuclease domain J154_00097 PF08535 KorB domain J154_00098 PF13614 AAA domain J154_00103 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J154_00104 PF00239 Resolvase, N terminal domain J154_00104 PF02796 Helix-turn-helix domain of resolvase J154_00105 PF13276 HTH-like domain J154_00105 PF00665 Integrase core domain J154_00105 PF13333 Integrase core domain J154_00106 PF00665 Integrase core domain J154_00106 PF13276 HTH-like domain J154_00106 PF13333 Integrase core domain J154_00107 PF03377 TAL effector repeat J154_00108 PF01526 Tn3 transposase DDE domain J154_00108 PF13700 Domain of unknown function (DUF4158) J154_00111 PF02796 Helix-turn-helix domain of resolvase J154_00111 PF00239 Resolvase, N terminal domain J154_00112 PF08299 Bacterial dnaA protein helix-turn-helix J154_00112 PF11638 DnaA N-terminal domain J154_00112 PF00308 Bacterial dnaA protein J154_00113 PF00712 DNA polymerase III beta subunit, N-terminal domain J154_00113 PF02768 DNA polymerase III beta subunit, C-terminal domain J154_00113 PF02767 DNA polymerase III beta subunit, central domain J154_00114 PF02463 RecF/RecN/SMC N terminal domain J154_00116 PF00204 DNA gyrase B J154_00116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00116 PF18053 DNA gyrase B subunit insert domain J154_00116 PF01751 Toprim domain J154_00116 PF00986 DNA gyrase B subunit, carboxyl terminus J154_00118 PF01435 Peptidase family M48 J154_00120 PF03544 Gram-negative bacterial TonB protein C-terminal J154_00121 PF01618 MotA/TolQ/ExbB proton channel family J154_00122 PF02472 Biopolymer transport protein ExbD/TolR J154_00123 PF02472 Biopolymer transport protein ExbD/TolR J154_00124 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J154_00126 PF13396 Phospholipase_D-nuclease N-terminal J154_00126 PF13091 PLD-like domain J154_00129 PF04055 Radical SAM superfamily J154_00131 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J154_00134 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J154_00134 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J154_00135 PF03572 Peptidase family S41 J154_00135 PF13180 PDZ domain J154_00136 PF01551 Peptidase family M23 J154_00138 PF04389 Peptidase family M28 J154_00140 PF00150 Cellulase (glycosyl hydrolase family 5) J154_00141 PF00150 Cellulase (glycosyl hydrolase family 5) J154_00142 PF00150 Cellulase (glycosyl hydrolase family 5) J154_00143 PF00107 Zinc-binding dehydrogenase J154_00143 PF08240 Alcohol dehydrogenase GroES-like domain J154_00144 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J154_00144 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_00145 PF01493 GXGXG motif J154_00145 PF01645 Conserved region in glutamate synthase J154_00145 PF04898 Glutamate synthase central domain J154_00145 PF00310 Glutamine amidotransferases class-II J154_00149 PF01804 Penicillin amidase J154_00151 PF03466 LysR substrate binding domain J154_00151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00154 PF02397 Bacterial sugar transferase J154_00155 PF02350 UDP-N-acetylglucosamine 2-epimerase J154_00157 PF03808 Glycosyl transferase WecB/TagA/CpsF family J154_00158 PF13439 Glycosyltransferase Family 4 J154_00158 PF00534 Glycosyl transferases group 1 J154_00162 PF13537 Glutamine amidotransferase domain J154_00162 PF00733 Asparagine synthase J154_00165 PF16363 GDP-mannose 4,6 dehydratase J154_00168 PF00664 ABC transporter transmembrane region J154_00168 PF00005 ABC transporter J154_00170 PF00733 Asparagine synthase J154_00170 PF13537 Glutamine amidotransferase domain J154_00175 PF00685 Sulfotransferase domain J154_00192 PF00271 Helicase conserved C-terminal domain J154_00192 PF00270 DEAD/DEAH box helicase J154_00192 PF09369 Domain of unknown function (DUF1998) J154_00193 PF03006 Haemolysin-III related J154_00196 PF00106 short chain dehydrogenase J154_00198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00198 PF03466 LysR substrate binding domain J154_00202 PF02525 Flavodoxin-like fold J154_00204 PF01527 Transposase J154_00205 PF13333 Integrase core domain J154_00205 PF00665 Integrase core domain J154_00205 PF13276 HTH-like domain J154_00213 PF05532 CsbD-like J154_00217 PF16485 Protealysin propeptide J154_00217 PF01447 Thermolysin metallopeptidase, catalytic domain J154_00217 PF02868 Thermolysin metallopeptidase, alpha-helical domain J154_00219 PF00293 NUDIX domain J154_00219 PF13344 Haloacid dehalogenase-like hydrolase J154_00222 PF00085 Thioredoxin J154_00223 PF08946 Osmosensory transporter coiled coil J154_00223 PF00083 Sugar (and other) transporter J154_00231 PF17863 AAA lid domain J154_00231 PF07726 ATPase family associated with various cellular activities (AAA) J154_00237 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J154_00238 PF00155 Aminotransferase class I and II J154_00239 PF00593 TonB dependent receptor J154_00239 PF07715 TonB-dependent Receptor Plug Domain J154_00241 PF07883 Cupin domain J154_00242 PF00171 Aldehyde dehydrogenase family J154_00246 PF02735 Ku70/Ku80 beta-barrel domain J154_00247 PF01070 FMN-dependent dehydrogenase J154_00248 PF00144 Beta-lactamase J154_00249 PF07730 Histidine kinase J154_00250 PF00072 Response regulator receiver domain J154_00250 PF00196 Bacterial regulatory proteins, luxR family J154_00254 PF18500 CadC C-terminal domain 1 J154_00254 PF00486 Transcriptional regulatory protein, C terminal J154_00255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J154_00255 PF12241 Trans-2-enoyl-CoA reductase catalytic region J154_00255 PF07055 Enoyl reductase FAD binding domain J154_00257 PF00294 pfkB family carbohydrate kinase J154_00268 PF01527 Transposase J154_00269 PF13333 Integrase core domain J154_00269 PF13276 HTH-like domain J154_00269 PF00665 Integrase core domain J154_00270 PF11896 Domain of unknown function (DUF3416) J154_00270 PF00128 Alpha amylase, catalytic domain J154_00271 PF00128 Alpha amylase, catalytic domain J154_00271 PF16657 Maltogenic Amylase, C-terminal domain J154_00272 PF02806 Alpha amylase, C-terminal all-beta domain J154_00272 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J154_00272 PF00128 Alpha amylase, catalytic domain J154_00274 PF00248 Aldo/keto reductase family J154_00275 PF00135 Carboxylesterase family J154_00276 PF13472 GDSL-like Lipase/Acylhydrolase family J154_00276 PF07859 alpha/beta hydrolase fold J154_00278 PF03480 Bacterial extracellular solute-binding protein, family 7 J154_00280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J154_00281 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J154_00281 PF04616 Glycosyl hydrolases family 43 J154_00282 PF00356 Bacterial regulatory proteins, lacI family J154_00283 PF04962 KduI/IolB family J154_00286 PF00657 GDSL-like Lipase/Acylhydrolase J154_00289 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J154_00290 PF01037 Lrp/AsnC ligand binding domain J154_00291 PF07715 TonB-dependent Receptor Plug Domain J154_00291 PF00593 TonB dependent receptor J154_00291 PF07660 Secretin and TonB N terminus short domain J154_00292 PF01734 Patatin-like phospholipase J154_00294 PF00005 ABC transporter J154_00297 PF00005 ABC transporter J154_00298 PF00528 Binding-protein-dependent transport system inner membrane component J154_00300 PF03781 Sulfatase-modifying factor enzyme 1 J154_00300 PF12867 DinB superfamily J154_00303 PF01381 Helix-turn-helix J154_00307 PF10609 NUBPL iron-transfer P-loop NTPase J154_00307 PF01883 Iron-sulfur cluster assembly protein J154_00310 PF13091 PLD-like domain J154_00311 PF03061 Thioesterase superfamily J154_00317 PF08240 Alcohol dehydrogenase GroES-like domain J154_00317 PF00107 Zinc-binding dehydrogenase J154_00319 PF02673 Bacitracin resistance protein BacA J154_00320 PF03951 Glutamine synthetase, beta-Grasp domain J154_00320 PF00120 Glutamine synthetase, catalytic domain J154_00321 PF00543 Nitrogen regulatory protein P-II J154_00322 PF00909 Ammonium Transporter Family J154_00323 PF00512 His Kinase A (phospho-acceptor) domain J154_00323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00323 PF00989 PAS fold J154_00324 PF00158 Sigma-54 interaction domain J154_00324 PF02954 Bacterial regulatory protein, Fis family J154_00324 PF00072 Response regulator receiver domain J154_00325 PF00080 Copper/zinc superoxide dismutase (SODC) J154_00326 PF00080 Copper/zinc superoxide dismutase (SODC) J154_00327 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J154_00329 PF00108 Thiolase, N-terminal domain J154_00329 PF02803 Thiolase, C-terminal domain J154_00336 PF00581 Rhodanese-like domain J154_00337 PF02556 Preprotein translocase subunit SecB J154_00338 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J154_00338 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J154_00340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J154_00340 PF00205 Thiamine pyrophosphate enzyme, central domain J154_00340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J154_00341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00342 PF00072 Response regulator receiver domain J154_00342 PF02954 Bacterial regulatory protein, Fis family J154_00342 PF00158 Sigma-54 interaction domain J154_00345 PF07690 Major Facilitator Superfamily J154_00346 PF00588 SpoU rRNA Methylase family J154_00349 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J154_00349 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J154_00350 PF13784 Fic/DOC family N-terminal J154_00350 PF02661 Fic/DOC family J154_00351 PF00561 alpha/beta hydrolase fold J154_00352 PF03692 Putative zinc- or iron-chelating domain J154_00353 PF00501 AMP-binding enzyme J154_00355 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J154_00357 PF01820 D-ala D-ala ligase N-terminus J154_00357 PF07478 D-ala D-ala ligase C-terminus J154_00359 PF03109 ABC1 family J154_00361 PF00849 RNA pseudouridylate synthase J154_00363 PF00472 RF-1 domain J154_00365 PF01112 Asparaginase J154_00366 PF01432 Peptidase family M3 J154_00367 PF12706 Beta-lactamase superfamily domain J154_00370 PF12833 Helix-turn-helix domain J154_00371 PF00999 Sodium/hydrogen exchanger family J154_00372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00372 PF03466 LysR substrate binding domain J154_00373 PF01274 Malate synthase J154_00374 PF00463 Isocitrate lyase family J154_00375 PF00990 Diguanylate cyclase, GGDEF domain J154_00379 PF00326 Prolyl oligopeptidase family J154_00380 PF00289 Biotin carboxylase, N-terminal domain J154_00380 PF02785 Biotin carboxylase C-terminal domain J154_00380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J154_00380 PF00364 Biotin-requiring enzyme J154_00381 PF01039 Carboxyl transferase domain J154_00382 PF02770 Acyl-CoA dehydrogenase, middle domain J154_00382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_00382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_00393 PF07683 Cobalamin synthesis protein cobW C-terminal domain J154_00393 PF02492 CobW/HypB/UreG, nucleotide-binding domain J154_00397 PF03969 AFG1-like ATPase J154_00398 PF01047 MarR family J154_00399 PF02566 OsmC-like protein J154_00404 PF00107 Zinc-binding dehydrogenase J154_00404 PF16884 N-terminal domain of oxidoreductase J154_00407 PF00849 RNA pseudouridylate synthase J154_00408 PF00593 TonB dependent receptor J154_00410 PF00270 DEAD/DEAH box helicase J154_00410 PF04408 Helicase associated domain (HA2) J154_00410 PF08482 ATP-dependent helicase C-terminal J154_00410 PF00271 Helicase conserved C-terminal domain J154_00411 PF07308 Protein of unknown function (DUF1456) J154_00412 PF00576 HIUase/Transthyretin family J154_00413 PF13454 FAD-NAD(P)-binding J154_00414 PF09349 OHCU decarboxylase J154_00414 PF01014 Uricase J154_00417 PF00266 Aminotransferase class-V J154_00418 PF01546 Peptidase family M20/M25/M40 J154_00418 PF07687 Peptidase dimerisation domain J154_00419 PF03466 LysR substrate binding domain J154_00419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00420 PF07690 Major Facilitator Superfamily J154_00423 PF01425 Amidase J154_00424 PF01156 Inosine-uridine preferring nucleoside hydrolase J154_00426 PF00860 Permease family J154_00427 PF00111 2Fe-2S iron-sulfur cluster binding domain J154_00428 PF00355 Rieske [2Fe-2S] domain J154_00429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00429 PF03466 LysR substrate binding domain J154_00430 PF01026 TatD related DNase J154_00433 PF03466 LysR substrate binding domain J154_00433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00434 PF07690 Major Facilitator Superfamily J154_00437 PF02146 Sir2 family J154_00438 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J154_00439 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J154_00439 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J154_00441 PF00551 Formyl transferase J154_00442 PF00486 Transcriptional regulatory protein, C terminal J154_00442 PF00072 Response regulator receiver domain J154_00443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00443 PF00512 His Kinase A (phospho-acceptor) domain J154_00443 PF00672 HAMP domain J154_00444 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_00444 PF00529 HlyD membrane-fusion protein of T1SS J154_00445 PF00873 AcrB/AcrD/AcrF family J154_00446 PF02321 Outer membrane efflux protein J154_00448 PF02219 Methylenetetrahydrofolate reductase J154_00449 PF02677 Epoxyqueuosine reductase QueH J154_00450 PF03466 LysR substrate binding domain J154_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00451 PF03358 NADPH-dependent FMN reductase J154_00453 PF08267 Cobalamin-independent synthase, N-terminal domain J154_00453 PF01717 Cobalamin-independent synthase, Catalytic domain J154_00454 PF03812 2-keto-3-deoxygluconate permease J154_00456 PF05368 NmrA-like family J154_00457 PF01638 HxlR-like helix-turn-helix J154_00461 PF13276 HTH-like domain J154_00461 PF00665 Integrase core domain J154_00461 PF13333 Integrase core domain J154_00462 PF01527 Transposase J154_00463 PF00589 Phage integrase family J154_00463 PF13495 Phage integrase, N-terminal SAM-like domain J154_00464 PF00920 Dehydratase family J154_00467 PF00132 Bacterial transferase hexapeptide (six repeats) J154_00468 PF07690 Major Facilitator Superfamily J154_00469 PF11871 Domain of unknown function (DUF3391) J154_00469 PF01966 HD domain J154_00473 PF00171 Aldehyde dehydrogenase family J154_00475 PF01494 FAD binding domain J154_00478 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J154_00478 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J154_00479 PF00230 Major intrinsic protein J154_00480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J154_00480 PF01266 FAD dependent oxidoreductase J154_00481 PF00455 DeoR C terminal sensor domain J154_00481 PF08220 DeoR-like helix-turn-helix domain J154_00483 PF00355 Rieske [2Fe-2S] domain J154_00484 PF01144 Coenzyme A transferase J154_00485 PF01144 Coenzyme A transferase J154_00486 PF02803 Thiolase, C-terminal domain J154_00486 PF00108 Thiolase, N-terminal domain J154_00487 PF00775 Dioxygenase J154_00487 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J154_00489 PF00206 Lyase J154_00489 PF10397 Adenylosuccinate lyase C-terminus J154_00490 PF12146 Serine aminopeptidase, S33 J154_00491 PF02627 Carboxymuconolactone decarboxylase family J154_00493 PF09339 IclR helix-turn-helix domain J154_00493 PF01614 Bacterial transcriptional regulator J154_00495 PF07859 alpha/beta hydrolase fold J154_00496 PF10677 Protein of unknown function (DUF2490) J154_00497 PF01134 Glucose inhibited division protein A J154_00497 PF13932 GidA associated domain J154_00499 PF00291 Pyridoxal-phosphate dependent enzyme J154_00503 PF13649 Methyltransferase domain J154_00505 PF12697 Alpha/beta hydrolase family J154_00507 PF00155 Aminotransferase class I and II J154_00508 PF04055 Radical SAM superfamily J154_00508 PF06968 Biotin and Thiamin Synthesis associated domain J154_00510 PF01040 UbiA prenyltransferase family J154_00514 PF05819 NolX protein J154_00522 PF01313 Bacterial export proteins, family 3 J154_00523 PF00813 FliP family J154_00526 PF00771 FHIPEP family J154_00527 PF01312 FlhB HrpN YscU SpaS Family J154_00530 PF01514 Secretory protein of YscJ/FliF family J154_00533 PF18269 T3SS EscN ATPase C-terminal domain J154_00533 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J154_00533 PF02874 ATP synthase alpha/beta family, beta-barrel domain J154_00535 PF01311 Bacterial export proteins, family 1 J154_00538 PF01464 Transglycosylase SLT domain J154_00541 PF00924 Mechanosensitive ion channel J154_00541 PF12795 Mechanosensitive ion channel porin domain J154_00541 PF12794 Mechanosensitive ion channel inner membrane domain 1 J154_00542 PF00884 Sulfatase J154_00543 PF03109 ABC1 family J154_00544 PF05661 Protein of unknown function (DUF808) J154_00545 PF00990 Diguanylate cyclase, GGDEF domain J154_00545 PF00072 Response regulator receiver domain J154_00546 PF00534 Glycosyl transferases group 1 J154_00546 PF08323 Starch synthase catalytic domain J154_00547 PF00128 Alpha amylase, catalytic domain J154_00547 PF02806 Alpha amylase, C-terminal all-beta domain J154_00547 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J154_00548 PF00128 Alpha amylase, catalytic domain J154_00548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J154_00548 PF11941 Domain of unknown function (DUF3459) J154_00549 PF02446 4-alpha-glucanotransferase J154_00550 PF00128 Alpha amylase, catalytic domain J154_00552 PF00128 Alpha amylase, catalytic domain J154_00552 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J154_00553 PF13460 NAD(P)H-binding J154_00556 PF06903 VirK protein J154_00557 PF02321 Outer membrane efflux protein J154_00560 PF00873 AcrB/AcrD/AcrF family J154_00563 PF00271 Helicase conserved C-terminal domain J154_00563 PF00270 DEAD/DEAH box helicase J154_00565 PF02817 e3 binding domain J154_00565 PF00364 Biotin-requiring enzyme J154_00565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J154_00567 PF02779 Transketolase, pyrimidine binding domain J154_00567 PF02780 Transketolase, C-terminal domain J154_00568 PF00676 Dehydrogenase E1 component J154_00570 PF03301 Tryptophan 2,3-dioxygenase J154_00571 PF00854 POT family J154_00573 PF01047 MarR family J154_00574 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J154_00575 PF04209 homogentisate 1,2-dioxygenase J154_00578 PF03334 Na+/H+ antiporter subunit J154_00579 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J154_00581 PF00361 Proton-conducting membrane transporter J154_00582 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J154_00583 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J154_00583 PF00361 Proton-conducting membrane transporter J154_00583 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J154_00583 PF13244 Domain of unknown function (DUF4040) J154_00586 PF02868 Thermolysin metallopeptidase, alpha-helical domain J154_00586 PF01447 Thermolysin metallopeptidase, catalytic domain J154_00586 PF01483 Proprotein convertase P-domain J154_00586 PF07504 Fungalysin/Thermolysin Propeptide Motif J154_00587 PF00182 Chitinase class I J154_00591 PF01259 SAICAR synthetase J154_00592 PF00226 DnaJ domain J154_00592 PF05099 Tellurite resistance protein TerB J154_00594 PF00834 Ribulose-phosphate 3 epimerase family J154_00595 PF00583 Acetyltransferase (GNAT) family J154_00596 PF00781 Diacylglycerol kinase catalytic domain J154_00597 PF04715 Anthranilate synthase component I, N terminal region J154_00597 PF00425 chorismate binding enzyme J154_00599 PF00117 Glutamine amidotransferase class-I J154_00601 PF02885 Glycosyl transferase family, helical bundle domain J154_00601 PF00591 Glycosyl transferase family, a/b domain J154_00602 PF00218 Indole-3-glycerol phosphate synthase J154_00604 PF00027 Cyclic nucleotide-binding domain J154_00604 PF00325 Bacterial regulatory proteins, crp family J154_00605 PF02675 S-adenosylmethionine decarboxylase J154_00606 PF00893 Small Multidrug Resistance protein J154_00607 PF03232 Ubiquinone biosynthesis protein COQ7 J154_00608 PF00572 Ribosomal protein L13 J154_00609 PF00380 Ribosomal protein S9/S16 J154_00612 PF00293 NUDIX domain J154_00613 PF00210 Ferritin-like domain J154_00614 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J154_00614 PF00672 HAMP domain J154_00614 PF00072 Response regulator receiver domain J154_00614 PF01627 Hpt domain J154_00614 PF00512 His Kinase A (phospho-acceptor) domain J154_00614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00615 PF00072 Response regulator receiver domain J154_00615 PF00486 Transcriptional regulatory protein, C terminal J154_00619 PF01521 Iron-sulphur cluster biosynthesis J154_00622 PF00293 NUDIX domain J154_00622 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J154_00622 PF09297 NADH pyrophosphatase zinc ribbon domain J154_00623 PF03186 CobD/Cbib protein J154_00623 PF17113 Regulatory signalling modulator protein AmpE J154_00626 PF07690 Major Facilitator Superfamily J154_00627 PF03466 LysR substrate binding domain J154_00627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00628 PF07690 Major Facilitator Superfamily J154_00629 PF12805 FUSC-like inner membrane protein yccS J154_00630 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J154_00630 PF02843 Phosphoribosylglycinamide synthetase, C domain J154_00630 PF02844 Phosphoribosylglycinamide synthetase, N domain J154_00632 PF01808 AICARFT/IMPCHase bienzyme J154_00632 PF02142 MGS-like domain J154_00633 PF01066 CDP-alcohol phosphatidyltransferase J154_00634 PF12147 Putative methyltransferase J154_00634 PF12146 Serine aminopeptidase, S33 J154_00635 PF00782 Dual specificity phosphatase, catalytic domain J154_00641 PF02954 Bacterial regulatory protein, Fis family J154_00644 PF01381 Helix-turn-helix J154_00649 PF00289 Biotin carboxylase, N-terminal domain J154_00649 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J154_00649 PF02785 Biotin carboxylase C-terminal domain J154_00651 PF00364 Biotin-requiring enzyme J154_00652 PF01220 Dehydroquinase class II J154_00653 PF11412 Disulphide bond corrector protein DsbC J154_00653 PF02683 Cytochrome C biogenesis protein transmembrane region J154_00654 PF03091 CutA1 divalent ion tolerance protein J154_00657 PF01852 START domain J154_00659 PF00106 short chain dehydrogenase J154_00660 PF04231 Endonuclease I J154_00661 PF00166 Chaperonin 10 Kd subunit J154_00662 PF00118 TCP-1/cpn60 chaperonin family J154_00664 PF07715 TonB-dependent Receptor Plug Domain J154_00664 PF00593 TonB dependent receptor J154_00665 PF00793 DAHP synthetase I family J154_00668 PF08450 SMP-30/Gluconolactonase/LRE-like region J154_00670 PF03710 Glutamate-ammonia ligase adenylyltransferase J154_00670 PF08335 GlnD PII-uridylyltransferase J154_00671 PF02592 Putative vitamin uptake transporter J154_00674 PF00881 Nitroreductase family J154_00675 PF04264 YceI-like domain J154_00679 PF16957 Malonate decarboxylase, alpha subunit, transporter J154_00680 PF06857 Malonate decarboxylase delta subunit (MdcD) J154_00681 PF01039 Carboxyl transferase domain J154_00683 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J154_00684 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J154_00686 PF00698 Acyl transferase domain J154_00688 PF00392 Bacterial regulatory proteins, gntR family J154_00688 PF07729 FCD domain J154_00689 PF13419 Haloacid dehalogenase-like hydrolase J154_00695 PF07745 Glycosyl hydrolase family 53 J154_00696 PF17831 Pyruvate dehydrogenase E1 component middle domain J154_00696 PF00456 Transketolase, thiamine diphosphate binding domain J154_00697 PF13333 Integrase core domain J154_00697 PF00665 Integrase core domain J154_00697 PF13276 HTH-like domain J154_00698 PF01527 Transposase J154_00699 PF00106 short chain dehydrogenase J154_00702 PF00106 short chain dehydrogenase J154_00704 PF13409 Glutathione S-transferase, N-terminal domain J154_00709 PF03176 MMPL family J154_00709 PF12823 Domain of unknown function (DUF3817) J154_00710 PF00326 Prolyl oligopeptidase family J154_00710 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J154_00711 PF07759 Protein of unknown function (DUF1615) J154_00712 PF00990 Diguanylate cyclase, GGDEF domain J154_00712 PF05230 MASE2 domain J154_00716 PF00892 EamA-like transporter family J154_00717 PF00497 Bacterial extracellular solute-binding proteins, family 3 J154_00720 PF00324 Amino acid permease J154_00722 PF01544 CorA-like Mg2+ transporter protein J154_00724 PF01204 Trehalase J154_00726 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J154_00726 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J154_00731 PF00563 EAL domain J154_00731 PF08447 PAS fold J154_00731 PF08448 PAS fold J154_00731 PF00990 Diguanylate cyclase, GGDEF domain J154_00732 PF02203 Tar ligand binding domain homologue J154_00732 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_00732 PF00672 HAMP domain J154_00733 PF00553 Cellulose binding domain J154_00733 PF00150 Cellulase (glycosyl hydrolase family 5) J154_00734 PF00916 Sulfate permease family J154_00734 PF01740 STAS domain J154_00735 PF00990 Diguanylate cyclase, GGDEF domain J154_00735 PF08448 PAS fold J154_00738 PF13632 Glycosyl transferase family group 2 J154_00740 PF06580 Histidine kinase J154_00740 PF07694 5TMR of 5TMR-LYT J154_00741 PF00072 Response regulator receiver domain J154_00741 PF04397 LytTr DNA-binding domain J154_00742 PF03900 Porphobilinogen deaminase, C-terminal domain J154_00742 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J154_00747 PF00326 Prolyl oligopeptidase family J154_00747 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J154_00749 PF00155 Aminotransferase class I and II J154_00750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J154_00750 PF00326 Prolyl oligopeptidase family J154_00751 PF04304 Protein of unknown function (DUF454) J154_00753 PF01678 Diaminopimelate epimerase J154_00755 PF02899 Phage integrase, N-terminal SAM-like domain J154_00755 PF00589 Phage integrase family J154_00756 PF00227 Proteasome subunit J154_00757 PF00004 ATPase family associated with various cellular activities (AAA) J154_00757 PF07724 AAA domain (Cdc48 subfamily) J154_00757 PF10431 C-terminal, D2-small domain, of ClpB protein J154_00759 PF13673 Acetyltransferase (GNAT) domain J154_00760 PF13533 Biotin-lipoyl like J154_00762 PF01209 ubiE/COQ5 methyltransferase family J154_00763 PF00563 EAL domain J154_00763 PF03707 Bacterial signalling protein N terminal repeat J154_00763 PF00990 Diguanylate cyclase, GGDEF domain J154_00764 PF11838 ERAP1-like C-terminal domain J154_00764 PF01433 Peptidase family M1 domain J154_00767 PF13360 PQQ-like domain J154_00768 PF00497 Bacterial extracellular solute-binding proteins, family 3 J154_00771 PF08240 Alcohol dehydrogenase GroES-like domain J154_00771 PF00107 Zinc-binding dehydrogenase J154_00773 PF02954 Bacterial regulatory protein, Fis family J154_00773 PF00158 Sigma-54 interaction domain J154_00773 PF01590 GAF domain J154_00774 PF00294 pfkB family carbohydrate kinase J154_00776 PF04085 rod shape-determining protein MreC J154_00778 PF00905 Penicillin binding protein transpeptidase domain J154_00778 PF03717 Penicillin-binding Protein dimerisation domain J154_00779 PF01098 Cell cycle protein J154_00780 PF00295 Glycosyl hydrolases family 28 J154_00781 PF13406 Transglycosylase SLT domain J154_00782 PF05036 Sporulation related domain J154_00782 PF03330 Lytic transglycolase J154_00783 PF00768 D-alanyl-D-alanine carboxypeptidase J154_00783 PF07943 Penicillin-binding protein 5, C-terminal domain J154_00785 PF04359 Protein of unknown function (DUF493) J154_00786 PF03099 Biotin/lipoate A/B protein ligase family J154_00787 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J154_00787 PF04055 Radical SAM superfamily J154_00788 PF00595 PDZ domain J154_00788 PF17804 Tail specific protease N-terminal domain J154_00788 PF11818 C-terminal domain of tail specific protease (DUF3340) J154_00788 PF03572 Peptidase family S41 J154_00790 PF03466 LysR substrate binding domain J154_00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_00792 PF00293 NUDIX domain J154_00792 PF01467 Cytidylyltransferase-like J154_00799 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J154_00799 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J154_00800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J154_00800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J154_00801 PF04972 BON domain J154_00802 PF08446 PAS fold J154_00802 PF00360 Phytochrome region J154_00802 PF00512 His Kinase A (phospho-acceptor) domain J154_00802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00802 PF01590 GAF domain J154_00803 PF00072 Response regulator receiver domain J154_00804 PF00512 His Kinase A (phospho-acceptor) domain J154_00804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J154_00814 PF00263 Bacterial type II and III secretion system protein J154_00814 PF03958 Bacterial type II/III secretion system short domain J154_00815 PF00437 Type II/IV secretion system protein J154_00816 PF00482 Type II secretion system (T2SS), protein F J154_00817 PF07963 Prokaryotic N-terminal methylation motif J154_00817 PF08334 Type II secretion system (T2SS), protein G J154_00818 PF12019 Type II transport protein GspH J154_00818 PF07963 Prokaryotic N-terminal methylation motif J154_00820 PF07963 Prokaryotic N-terminal methylation motif J154_00820 PF11612 Type II secretion system (T2SS), protein J J154_00821 PF03934 Type II secretion system (T2SS), protein K J154_00827 PF02837 Glycosyl hydrolases family 2, sugar binding domain J154_00827 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J154_00827 PF16355 Domain of unknown function (DUF4982) J154_00827 PF00703 Glycosyl hydrolases family 2 J154_00827 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J154_00832 PF07690 Major Facilitator Superfamily J154_00833 PF00356 Bacterial regulatory proteins, lacI family J154_00834 PF01380 SIS domain J154_00835 PF01979 Amidohydrolase family J154_00837 PF12627 Probable RNA and SrmB- binding site of polymerase A J154_00837 PF01743 Poly A polymerase head domain J154_00837 PF01966 HD domain J154_00838 PF05199 GMC oxidoreductase J154_00838 PF00732 GMC oxidoreductase J154_00839 PF00171 Aldehyde dehydrogenase family J154_00840 PF02028 BCCT, betaine/carnitine/choline family transporter J154_00842 PF01323 DSBA-like thioredoxin domain J154_00845 PF00034 Cytochrome c J154_00846 PF01926 50S ribosome-binding GTPase J154_00847 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J154_00847 PF10996 Beta-Casp domain J154_00847 PF00753 Metallo-beta-lactamase superfamily J154_00849 PF04107 Glutamate-cysteine ligase family 2(GCS2) J154_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00850 PF00672 HAMP domain J154_00850 PF00512 His Kinase A (phospho-acceptor) domain J154_00851 PF00486 Transcriptional regulatory protein, C terminal J154_00851 PF00072 Response regulator receiver domain J154_00854 PF02583 Metal-sensitive transcriptional repressor J154_00855 PF00107 Zinc-binding dehydrogenase J154_00855 PF08240 Alcohol dehydrogenase GroES-like domain J154_00856 PF04828 Glutathione-dependent formaldehyde-activating enzyme J154_00857 PF00756 Putative esterase J154_00858 PF00155 Aminotransferase class I and II J154_00858 PF00392 Bacterial regulatory proteins, gntR family J154_00859 PF02567 Phenazine biosynthesis-like protein J154_00860 PF00892 EamA-like transporter family J154_00862 PF00005 ABC transporter J154_00862 PF12848 ABC transporter J154_00864 PF00464 Serine hydroxymethyltransferase J154_00865 PF03477 ATP cone domain J154_00867 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J154_00867 PF01872 RibD C-terminal domain J154_00870 PF00677 Lumazine binding domain J154_00871 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J154_00871 PF00925 GTP cyclohydrolase II J154_00872 PF00885 6,7-dimethyl-8-ribityllumazine synthase J154_00873 PF01029 NusB family J154_00874 PF02769 AIR synthase related protein, C-terminal domain J154_00874 PF00586 AIR synthase related protein, N-terminal domain J154_00878 PF03814 Potassium-transporting ATPase A subunit J154_00880 PF02669 K+-transporting ATPase, c chain J154_00881 PF00512 His Kinase A (phospho-acceptor) domain J154_00881 PF02702 Osmosensitive K+ channel His kinase sensor domain J154_00881 PF13492 GAF domain J154_00881 PF13493 Domain of unknown function (DUF4118) J154_00881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00882 PF00072 Response regulator receiver domain J154_00882 PF00486 Transcriptional regulatory protein, C terminal J154_00885 PF01565 FAD binding domain J154_00885 PF02913 FAD linked oxidases, C-terminal domain J154_00886 PF04307 LexA-binding, inner membrane-associated putative hydrolase J154_00887 PF02021 Uncharacterised protein family UPF0102 J154_00889 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J154_00894 PF02381 MraZ protein, putative antitoxin-like J154_00895 PF01795 MraW methylase family J154_00896 PF04999 Cell division protein FtsL J154_00897 PF00905 Penicillin binding protein transpeptidase domain J154_00897 PF03717 Penicillin-binding Protein dimerisation domain J154_00898 PF01225 Mur ligase family, catalytic domain J154_00898 PF02875 Mur ligase family, glutamate ligase domain J154_00898 PF08245 Mur ligase middle domain J154_00899 PF08245 Mur ligase middle domain J154_00899 PF02875 Mur ligase family, glutamate ligase domain J154_00899 PF01225 Mur ligase family, catalytic domain J154_00900 PF00953 Glycosyl transferase family 4 J154_00901 PF01098 Cell cycle protein J154_00902 PF04101 Glycosyltransferase family 28 C-terminal domain J154_00902 PF03033 Glycosyltransferase family 28 N-terminal domain J154_00903 PF01225 Mur ligase family, catalytic domain J154_00903 PF02875 Mur ligase family, glutamate ligase domain J154_00903 PF08245 Mur ligase middle domain J154_00904 PF07478 D-ala D-ala ligase C-terminus J154_00904 PF01820 D-ala D-ala ligase N-terminus J154_00905 PF03799 Cell division protein FtsQ J154_00905 PF08478 POTRA domain, FtsQ-type J154_00906 PF02491 SHS2 domain inserted in FTSA J154_00907 PF00091 Tubulin/FtsZ family, GTPase domain J154_00907 PF12327 FtsZ family, C-terminal domain J154_00908 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J154_00910 PF01476 LysM domain J154_00910 PF01551 Peptidase family M23 J154_00910 PF08525 Opacity-associated protein A N-terminal motif J154_00911 PF02810 SEC-C motif J154_00911 PF07517 SecA DEAD-like domain J154_00911 PF01043 SecA preprotein cross-linking domain J154_00911 PF07516 SecA Wing and Scaffold domain J154_00912 PF00293 NUDIX domain J154_00914 PF02219 Methylenetetrahydrofolate reductase J154_00917 PF00107 Zinc-binding dehydrogenase J154_00917 PF00698 Acyl transferase domain J154_00917 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_00917 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_00917 PF08240 Alcohol dehydrogenase GroES-like domain J154_00917 PF08659 KR domain J154_00917 PF00550 Phosphopantetheine attachment site J154_00917 PF14765 Polyketide synthase dehydratase J154_00917 PF16197 Ketoacyl-synthetase C-terminal extension J154_00918 PF00082 Subtilase family J154_00918 PF09286 Pro-kumamolisin, activation domain J154_00920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J154_00921 PF00128 Alpha amylase, catalytic domain J154_00927 PF13649 Methyltransferase domain J154_00928 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J154_00928 PF05221 S-adenosyl-L-homocysteine hydrolase J154_00931 PF00311 Phosphoenolpyruvate carboxylase J154_00936 PF00328 Histidine phosphatase superfamily (branch 2) J154_00937 PF02773 S-adenosylmethionine synthetase, C-terminal domain J154_00937 PF02772 S-adenosylmethionine synthetase, central domain J154_00937 PF00438 S-adenosylmethionine synthetase, N-terminal domain J154_00939 PF13649 Methyltransferase domain J154_00940 PF01207 Dihydrouridine synthase (Dus) J154_00943 PF00294 pfkB family carbohydrate kinase J154_00944 PF07670 Nucleoside recognition J154_00944 PF01773 Na+ dependent nucleoside transporter N-terminus J154_00944 PF07662 Na+ dependent nucleoside transporter C-terminus J154_00945 PF00248 Aldo/keto reductase family J154_00947 PF00593 TonB dependent receptor J154_00947 PF07715 TonB-dependent Receptor Plug Domain J154_00952 PF00528 Binding-protein-dependent transport system inner membrane component J154_00953 PF00005 ABC transporter J154_00955 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J154_00957 PF00005 ABC transporter J154_00958 PF13472 GDSL-like Lipase/Acylhydrolase family J154_00959 PF00486 Transcriptional regulatory protein, C terminal J154_00959 PF00072 Response regulator receiver domain J154_00960 PF00512 His Kinase A (phospho-acceptor) domain J154_00960 PF08521 Two-component sensor kinase N-terminal J154_00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_00962 PF01219 Prokaryotic diacylglycerol kinase J154_00966 PF01790 Prolipoprotein diacylglyceryl transferase J154_00967 PF00303 Thymidylate synthase J154_00969 PF00186 Dihydrofolate reductase J154_00970 PF00158 Sigma-54 interaction domain J154_00971 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_00971 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J154_00972 PF00005 ABC transporter J154_00973 PF00528 Binding-protein-dependent transport system inner membrane component J154_00975 PF00296 Luciferase-like monooxygenase J154_00976 PF03358 NADPH-dependent FMN reductase J154_00980 PF00296 Luciferase-like monooxygenase J154_00981 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J154_00982 PF00528 Binding-protein-dependent transport system inner membrane component J154_00985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J154_00985 PF00005 ABC transporter J154_00986 PF00149 Calcineurin-like phosphoesterase J154_00987 PF04379 ApaG domain J154_00988 PF00398 Ribosomal RNA adenine dimethylase J154_00989 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J154_00990 PF09312 SurA N-terminal domain J154_00990 PF00639 PPIC-type PPIASE domain J154_00991 PF04453 LPS transport system D J154_00991 PF03968 OstA-like protein J154_00994 PF00850 Histone deacetylase domain J154_00995 PF01923 Cobalamin adenosyltransferase J154_00997 PF01494 FAD binding domain J154_00998 PF01494 FAD binding domain J154_01002 PF07729 FCD domain J154_01002 PF00392 Bacterial regulatory proteins, gntR family J154_01003 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J154_01004 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J154_01004 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J154_01005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01005 PF03466 LysR substrate binding domain J154_01006 PF00501 AMP-binding enzyme J154_01006 PF13193 AMP-binding enzyme C-terminal domain J154_01007 PF00171 Aldehyde dehydrogenase family J154_01008 PF00378 Enoyl-CoA hydratase/isomerase J154_01012 PF08450 SMP-30/Gluconolactonase/LRE-like region J154_01013 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J154_01013 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J154_01014 PF18125 RlmM ferredoxin-like domain J154_01014 PF01728 FtsJ-like methyltransferase J154_01017 PF00892 EamA-like transporter family J154_01018 PF00749 tRNA synthetases class I (E and Q), catalytic domain J154_01018 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J154_01021 PF00072 Response regulator receiver domain J154_01021 PF00990 Diguanylate cyclase, GGDEF domain J154_01022 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J154_01022 PF00672 HAMP domain J154_01022 PF01627 Hpt domain J154_01022 PF00512 His Kinase A (phospho-acceptor) domain J154_01022 PF00072 Response regulator receiver domain J154_01022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01023 PF00072 Response regulator receiver domain J154_01023 PF00196 Bacterial regulatory proteins, luxR family J154_01025 PF01625 Peptide methionine sulfoxide reductase J154_01027 PF00923 Transaldolase/Fructose-6-phosphate aldolase J154_01028 PF14760 Rnk N-terminus J154_01028 PF01272 Transcription elongation factor, GreA/GreB, C-term J154_01029 PF03466 LysR substrate binding domain J154_01029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01030 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_01030 PF13192 Thioredoxin domain J154_01031 PF10417 C-terminal domain of 1-Cys peroxiredoxin J154_01031 PF00578 AhpC/TSA family J154_01032 PF05175 Methyltransferase small domain J154_01032 PF17827 PrmC N-terminal domain J154_01033 PF00561 alpha/beta hydrolase fold J154_01035 PF00293 NUDIX domain J154_01036 PF01367 5'-3' exonuclease, C-terminal SAM fold J154_01036 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J154_01036 PF01612 3'-5' exonuclease J154_01036 PF00476 DNA polymerase family A J154_01042 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J154_01042 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J154_01042 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J154_01047 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J154_01048 PF02233 NAD(P) transhydrogenase beta subunit J154_01051 PF01063 Amino-transferase class IV J154_01052 PF00082 Subtilase family J154_01052 PF04151 Bacterial pre-peptidase C-terminal domain J154_01053 PF04151 Bacterial pre-peptidase C-terminal domain J154_01053 PF00082 Subtilase family J154_01054 PF04151 Bacterial pre-peptidase C-terminal domain J154_01054 PF00082 Subtilase family J154_01055 PF04073 Aminoacyl-tRNA editing domain J154_01057 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J154_01057 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J154_01058 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J154_01058 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J154_01060 PF03358 NADPH-dependent FMN reductase J154_01061 PF03631 Virulence factor BrkB J154_01062 PF08534 Redoxin J154_01063 PF00708 Acylphosphatase J154_01065 PF03976 Polyphosphate kinase 2 (PPK2) J154_01066 PF00994 Probable molybdopterin binding domain J154_01068 PF00472 RF-1 domain J154_01068 PF03462 PCRF domain J154_01069 PF01488 Shikimate / quinate 5-dehydrogenase J154_01069 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J154_01069 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J154_01071 PF03550 Outer membrane lipoprotein LolB J154_01072 PF00288 GHMP kinases N terminal domain J154_01072 PF08544 GHMP kinases C terminal J154_01074 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J154_01074 PF14572 Phosphoribosyl synthetase-associated domain J154_01075 PF14693 Ribosomal protein TL5, C-terminal domain J154_01075 PF01386 Ribosomal L25p family J154_01076 PF01195 Peptidyl-tRNA hydrolase J154_01077 PF01926 50S ribosome-binding GTPase J154_01077 PF06071 Protein of unknown function (DUF933) J154_01081 PF03144 Elongation factor Tu domain 2 J154_01081 PF00009 Elongation factor Tu GTP binding domain J154_01081 PF03143 Elongation factor Tu C-terminal domain J154_01083 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J154_01084 PF02357 Transcription termination factor nusG J154_01084 PF00467 KOW motif J154_01085 PF03946 Ribosomal protein L11, N-terminal domain J154_01085 PF00298 Ribosomal protein L11, RNA binding domain J154_01086 PF00687 Ribosomal protein L1p/L10e family J154_01087 PF00466 Ribosomal protein L10 J154_01088 PF16320 Ribosomal protein L7/L12 dimerisation domain J154_01088 PF00542 Ribosomal protein L7/L12 C-terminal domain J154_01090 PF00562 RNA polymerase Rpb2, domain 6 J154_01090 PF04563 RNA polymerase beta subunit J154_01090 PF10385 RNA polymerase beta subunit external 1 domain J154_01090 PF04561 RNA polymerase Rpb2, domain 2 J154_01090 PF04565 RNA polymerase Rpb2, domain 3 J154_01090 PF04560 RNA polymerase Rpb2, domain 7 J154_01091 PF00623 RNA polymerase Rpb1, domain 2 J154_01091 PF05000 RNA polymerase Rpb1, domain 4 J154_01091 PF04983 RNA polymerase Rpb1, domain 3 J154_01091 PF04998 RNA polymerase Rpb1, domain 5 J154_01091 PF04997 RNA polymerase Rpb1, domain 1 J154_01092 PF00164 Ribosomal protein S12/S23 J154_01093 PF00177 Ribosomal protein S7p/S5e J154_01094 PF00009 Elongation factor Tu GTP binding domain J154_01094 PF03144 Elongation factor Tu domain 2 J154_01094 PF14492 Elongation Factor G, domain II J154_01094 PF00679 Elongation factor G C-terminus J154_01094 PF03764 Elongation factor G, domain IV J154_01095 PF03143 Elongation factor Tu C-terminal domain J154_01095 PF03144 Elongation factor Tu domain 2 J154_01095 PF00009 Elongation factor Tu GTP binding domain J154_01096 PF00338 Ribosomal protein S10p/S20e J154_01097 PF00297 Ribosomal protein L3 J154_01098 PF00573 Ribosomal protein L4/L1 family J154_01099 PF00276 Ribosomal protein L23 J154_01100 PF00181 Ribosomal Proteins L2, RNA binding domain J154_01100 PF03947 Ribosomal Proteins L2, C-terminal domain J154_01101 PF00203 Ribosomal protein S19 J154_01102 PF00237 Ribosomal protein L22p/L17e J154_01103 PF00189 Ribosomal protein S3, C-terminal domain J154_01103 PF07650 KH domain J154_01104 PF00252 Ribosomal protein L16p/L10e J154_01105 PF00831 Ribosomal L29 protein J154_01106 PF00366 Ribosomal protein S17 J154_01107 PF00238 Ribosomal protein L14p/L23e J154_01108 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J154_01108 PF00467 KOW motif J154_01109 PF00281 Ribosomal protein L5 J154_01109 PF00673 ribosomal L5P family C-terminus J154_01110 PF00253 Ribosomal protein S14p/S29e J154_01111 PF00410 Ribosomal protein S8 J154_01112 PF00347 Ribosomal protein L6 J154_01113 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J154_01114 PF00333 Ribosomal protein S5, N-terminal domain J154_01114 PF03719 Ribosomal protein S5, C-terminal domain J154_01115 PF00327 Ribosomal protein L30p/L7e J154_01116 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J154_01117 PF00344 SecY translocase J154_01118 PF00416 Ribosomal protein S13/S18 J154_01119 PF00411 Ribosomal protein S11 J154_01120 PF00163 Ribosomal protein S4/S9 N-terminal domain J154_01120 PF01479 S4 domain J154_01121 PF01000 RNA polymerase Rpb3/RpoA insert domain J154_01121 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J154_01121 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J154_01122 PF01196 Ribosomal protein L17 J154_01123 PF02600 Disulfide bond formation protein DsbB J154_01125 PF01474 Class-II DAHP synthetase family J154_01127 PF01425 Amidase J154_01130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J154_01131 PF00056 lactate/malate dehydrogenase, NAD binding domain J154_01131 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J154_01132 PF02798 Glutathione S-transferase, N-terminal domain J154_01132 PF00043 Glutathione S-transferase, C-terminal domain J154_01134 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_01134 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J154_01135 PF00107 Zinc-binding dehydrogenase J154_01135 PF08240 Alcohol dehydrogenase GroES-like domain J154_01136 PF05736 OprF membrane domain J154_01136 PF00691 OmpA family J154_01138 PF00849 RNA pseudouridylate synthase J154_01140 PF00155 Aminotransferase class I and II J154_01142 PF00528 Binding-protein-dependent transport system inner membrane component J154_01143 PF00528 Binding-protein-dependent transport system inner membrane component J154_01144 PF12857 TOBE-like domain J154_01144 PF00005 ABC transporter J154_01144 PF17850 CysA C-terminal regulatory domain J154_01146 PF00107 Zinc-binding dehydrogenase J154_01146 PF08240 Alcohol dehydrogenase GroES-like domain J154_01148 PF04185 Phosphoesterase family J154_01148 PF05506 Domain of unknown function (DUF756) J154_01149 PF10459 Peptidase S46 J154_01150 PF10459 Peptidase S46 J154_01151 PF00300 Histidine phosphatase superfamily (branch 1) J154_01152 PF08245 Mur ligase middle domain J154_01152 PF02875 Mur ligase family, glutamate ligase domain J154_01155 PF00156 Phosphoribosyl transferase domain J154_01156 PF04305 Protein of unknown function (DUF455) J154_01160 PF00149 Calcineurin-like phosphoesterase J154_01162 PF01569 PAP2 superfamily J154_01163 PF13439 Glycosyltransferase Family 4 J154_01163 PF00534 Glycosyl transferases group 1 J154_01164 PF02541 Ppx/GppA phosphatase family J154_01165 PF17941 Polyphosphate kinase C-terminal domain 1 J154_01165 PF13090 Polyphosphate kinase C-terminal domain 2 J154_01165 PF13089 Polyphosphate kinase N-terminal domain J154_01165 PF02503 Polyphosphate kinase middle domain J154_01166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01166 PF00989 PAS fold J154_01166 PF11808 Phosphate regulon sensor protein PhoR J154_01166 PF00512 His Kinase A (phospho-acceptor) domain J154_01167 PF00486 Transcriptional regulatory protein, C terminal J154_01167 PF00072 Response regulator receiver domain J154_01168 PF01435 Peptidase family M48 J154_01168 PF13181 Tetratricopeptide repeat J154_01169 PF00462 Glutaredoxin J154_01171 PF00180 Isocitrate/isopropylmalate dehydrogenase J154_01177 PF13276 HTH-like domain J154_01177 PF00665 Integrase core domain J154_01177 PF13333 Integrase core domain J154_01178 PF01527 Transposase J154_01201 PF01527 Transposase J154_01202 PF13276 HTH-like domain J154_01202 PF00665 Integrase core domain J154_01202 PF13333 Integrase core domain J154_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01205 PF00512 His Kinase A (phospho-acceptor) domain J154_01205 PF00989 PAS fold J154_01208 PF05698 Bacterial trigger factor protein (TF) C-terminus J154_01208 PF05697 Bacterial trigger factor protein (TF) J154_01209 PF00574 Clp protease J154_01210 PF07724 AAA domain (Cdc48 subfamily) J154_01210 PF06689 ClpX C4-type zinc finger J154_01210 PF10431 C-terminal, D2-small domain, of ClpB protein J154_01211 PF05362 Lon protease (S16) C-terminal proteolytic domain J154_01211 PF00004 ATPase family associated with various cellular activities (AAA) J154_01211 PF02190 ATP-dependent protease La (LON) substrate-binding domain J154_01212 PF00216 Bacterial DNA-binding protein J154_01218 PF01476 LysM domain J154_01218 PF05257 CHAP domain J154_01219 PF16123 Hydroxyacylglutathione hydrolase C-terminus J154_01219 PF00753 Metallo-beta-lactamase superfamily J154_01221 PF00075 RNase H J154_01222 PF00929 Exonuclease J154_01226 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J154_01228 PF12706 Beta-lactamase superfamily domain J154_01228 PF00753 Metallo-beta-lactamase superfamily J154_01229 PF04055 Radical SAM superfamily J154_01229 PF06463 Molybdenum Cofactor Synthesis C J154_01230 PF01967 MoaC family J154_01231 PF02597 ThiS family J154_01232 PF02391 MoaE protein J154_01235 PF01527 Transposase J154_01236 PF13276 HTH-like domain J154_01236 PF00665 Integrase core domain J154_01236 PF13333 Integrase core domain J154_01242 PF12170 DNA polymerase III tau subunit V interacting with alpha J154_01242 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J154_01242 PF12169 DNA polymerase III subunits gamma and tau domain III J154_01243 PF02575 YbaB/EbfC DNA-binding family J154_01244 PF02132 RecR protein J154_01244 PF13662 Toprim domain J154_01245 PF01230 HIT domain J154_01247 PF11992 Domain of unknown function (DUF3488) J154_01247 PF01841 Transglutaminase-like superfamily J154_01247 PF13559 Domain of unknown function (DUF4129) J154_01249 PF17863 AAA lid domain J154_01249 PF07726 ATPase family associated with various cellular activities (AAA) J154_01253 PF02545 Maf-like protein J154_01254 PF02620 Large ribosomal RNA subunit accumulation protein YceD J154_01255 PF01783 Ribosomal L32p protein family J154_01256 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J154_01256 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J154_01258 PF00698 Acyl transferase domain J154_01260 PF00550 Phosphopantetheine attachment site J154_01261 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_01261 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_01262 PF04715 Anthranilate synthase component I, N terminal region J154_01262 PF00425 chorismate binding enzyme J154_01263 PF02618 YceG-like family J154_01264 PF09115 DNA polymerase III, delta subunit, C terminal J154_01268 PF00158 Sigma-54 interaction domain J154_01268 PF06506 Propionate catabolism activator J154_01268 PF02954 Bacterial regulatory protein, Fis family J154_01270 PF00285 Citrate synthase, C-terminal domain J154_01271 PF00330 Aconitase family (aconitate hydratase) J154_01271 PF00694 Aconitase C-terminal domain J154_01272 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J154_01274 PF04303 PrpF protein J154_01275 PF00593 TonB dependent receptor J154_01275 PF07715 TonB-dependent Receptor Plug Domain J154_01277 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J154_01277 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J154_01277 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J154_01277 PF17962 Bacterial macroglobulin domain 6 J154_01277 PF01835 MG2 domain J154_01277 PF07703 Alpha-2-macroglobulin bait region domain J154_01277 PF00207 Alpha-2-macroglobulin family J154_01277 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J154_01280 PF00905 Penicillin binding protein transpeptidase domain J154_01280 PF00912 Transglycosylase J154_01280 PF06832 Penicillin-Binding Protein C-terminus Family J154_01282 PF08534 Redoxin J154_01284 PF00226 DnaJ domain J154_01284 PF01556 DnaJ C terminal domain J154_01286 PF00072 Response regulator receiver domain J154_01288 PF12221 Bacterial membrane protein N terminal J154_01288 PF01145 SPFH domain / Band 7 family J154_01289 PF01145 SPFH domain / Band 7 family J154_01291 PF00709 Adenylosuccinate synthetase J154_01292 PF01433 Peptidase family M1 domain J154_01292 PF11838 ERAP1-like C-terminal domain J154_01295 PF00440 Bacterial regulatory proteins, tetR family J154_01308 PF13456 Reverse transcriptase-like J154_01308 PF00300 Histidine phosphatase superfamily (branch 1) J154_01309 PF01256 Carbohydrate kinase J154_01311 PF00723 Glycosyl hydrolases family 15 J154_01313 PF17678 Glycosyl hydrolase family 92 N-terminal domain J154_01313 PF07971 Glycosyl hydrolase family 92 J154_01317 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_01321 PF17755 UvrA DNA-binding domain J154_01322 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J154_01322 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J154_01323 PF00941 FAD binding domain in molybdopterin dehydrogenase J154_01323 PF03450 CO dehydrogenase flavoprotein C-terminal domain J154_01324 PF01799 [2Fe-2S] binding domain J154_01324 PF00111 2Fe-2S iron-sulfur cluster binding domain J154_01331 PF01726 LexA DNA binding domain J154_01331 PF00717 Peptidase S24-like J154_01334 PF02811 PHP domain J154_01334 PF14579 Helix-hairpin-helix motif J154_01334 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J154_01334 PF07733 Bacterial DNA polymerase III alpha NTPase domain J154_01335 PF00326 Prolyl oligopeptidase family J154_01337 PF03169 OPT oligopeptide transporter protein J154_01340 PF07676 WD40-like Beta Propeller Repeat J154_01340 PF00326 Prolyl oligopeptidase family J154_01340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J154_01343 PF12833 Helix-turn-helix domain J154_01343 PF02311 AraC-like ligand binding domain J154_01348 PF18011 C-terminal domain found in long catalases J154_01348 PF06628 Catalase-related immune-responsive J154_01348 PF00199 Catalase J154_01349 PF00248 Aldo/keto reductase family J154_01350 PF00135 Carboxylesterase family J154_01351 PF02347 Glycine cleavage system P-protein J154_01354 PF07690 Major Facilitator Superfamily J154_01357 PF00884 Sulfatase J154_01357 PF08019 Phosphoethanolamine transferase EptA/EptB J154_01360 PF00072 Response regulator receiver domain J154_01360 PF00486 Transcriptional regulatory protein, C terminal J154_01361 PF00512 His Kinase A (phospho-acceptor) domain J154_01361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01361 PF08521 Two-component sensor kinase N-terminal J154_01363 PF03776 Septum formation topological specificity factor MinE J154_01364 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J154_01365 PF05209 Septum formation inhibitor MinC, N-terminal domain J154_01365 PF03775 Septum formation inhibitor MinC, C-terminal domain J154_01367 PF07730 Histidine kinase J154_01368 PF00072 Response regulator receiver domain J154_01368 PF00196 Bacterial regulatory proteins, luxR family J154_01371 PF00730 HhH-GPD superfamily base excision DNA repair protein J154_01376 PF02222 ATP-grasp domain J154_01378 PF04376 Arginine-tRNA-protein transferase, N terminus J154_01378 PF04377 Arginine-tRNA-protein transferase, C terminus J154_01384 PF00378 Enoyl-CoA hydratase/isomerase J154_01387 PF17755 UvrA DNA-binding domain J154_01387 PF17760 UvrA interaction domain J154_01387 PF00005 ABC transporter J154_01388 PF00829 Ribosomal prokaryotic L21 protein J154_01389 PF01016 Ribosomal L27 protein J154_01390 PF01018 GTP1/OBG J154_01390 PF01926 50S ribosome-binding GTPase J154_01391 PF01649 Ribosomal protein S20 J154_01392 PF03023 Lipid II flippase MurJ J154_01393 PF06574 FAD synthetase J154_01393 PF01687 Riboflavin kinase J154_01394 PF06827 Zinc finger found in FPG and IleRS J154_01394 PF00133 tRNA synthetases class I (I, L, M and V) J154_01394 PF08264 Anticodon-binding domain of tRNA J154_01395 PF01252 Signal peptidase (SPase) II J154_01396 PF02401 LytB protein J154_01398 PF06481 COX Aromatic Rich Motif J154_01398 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J154_01399 PF00115 Cytochrome C and Quinol oxidase polypeptide I J154_01400 PF00510 Cytochrome c oxidase subunit III J154_01401 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J154_01403 PF18073 Rubredoxin metal binding domain J154_01404 PF05656 Protein of unknown function (DUF805) J154_01406 PF12833 Helix-turn-helix domain J154_01407 PF00183 Hsp90 protein J154_01407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01409 PF08678 Rsbr N terminal J154_01409 PF01740 STAS domain J154_01410 PF01740 STAS domain J154_01411 PF13581 Histidine kinase-like ATPase domain J154_01413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01413 PF17149 Periplasmic sensor domain found in signal transduction proteins J154_01413 PF00512 His Kinase A (phospho-acceptor) domain J154_01413 PF01627 Hpt domain J154_01413 PF00672 HAMP domain J154_01413 PF00072 Response regulator receiver domain J154_01414 PF00072 Response regulator receiver domain J154_01414 PF13188 PAS domain J154_01414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01414 PF00512 His Kinase A (phospho-acceptor) domain J154_01414 PF08448 PAS fold J154_01415 PF04616 Glycosyl hydrolases family 43 J154_01415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J154_01416 PF07715 TonB-dependent Receptor Plug Domain J154_01416 PF00593 TonB dependent receptor J154_01417 PF00085 Thioredoxin J154_01418 PF07237 Protein of unknown function (DUF1428) J154_01419 PF13493 Domain of unknown function (DUF4118) J154_01419 PF00512 His Kinase A (phospho-acceptor) domain J154_01419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01419 PF02702 Osmosensitive K+ channel His kinase sensor domain J154_01419 PF13492 GAF domain J154_01420 PF01339 CheB methylesterase J154_01421 PF01739 CheR methyltransferase, SAM binding domain J154_01421 PF03705 CheR methyltransferase, all-alpha domain J154_01422 PF00512 His Kinase A (phospho-acceptor) domain J154_01422 PF00672 HAMP domain J154_01422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01422 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J154_01422 PF00072 Response regulator receiver domain J154_01422 PF01627 Hpt domain J154_01423 PF13426 PAS domain J154_01423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01423 PF00072 Response regulator receiver domain J154_01424 PF00072 Response regulator receiver domain J154_01425 PF00722 Glycosyl hydrolases family 16 J154_01426 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J154_01427 PF01263 Aldose 1-epimerase J154_01428 PF01578 Cytochrome C assembly protein J154_01429 PF02978 Signal peptide binding domain J154_01429 PF02881 SRP54-type protein, helical bundle domain J154_01429 PF00448 SRP54-type protein, GTPase domain J154_01430 PF03060 Nitronate monooxygenase J154_01431 PF01063 Amino-transferase class IV J154_01432 PF00886 Ribosomal protein S16 J154_01433 PF05239 PRC-barrel domain J154_01433 PF01782 RimM N-terminal domain J154_01434 PF01746 tRNA (Guanine-1)-methyltransferase J154_01435 PF01245 Ribosomal protein L19 J154_01436 PF01554 MatE J154_01437 PF01554 MatE J154_01440 PF01479 S4 domain J154_01441 PF00141 Peroxidase J154_01443 PF05192 MutS domain III J154_01443 PF05188 MutS domain II J154_01443 PF01624 MutS domain I J154_01443 PF00488 MutS domain V J154_01443 PF05190 MutS family domain IV J154_01446 PF03527 RHS protein J154_01446 PF05593 RHS Repeat J154_01450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J154_01450 PF00703 Glycosyl hydrolases family 2 J154_01450 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J154_01450 PF16355 Domain of unknown function (DUF4982) J154_01450 PF02837 Glycosyl hydrolases family 2, sugar binding domain J154_01451 PF07745 Glycosyl hydrolase family 53 J154_01453 PF01381 Helix-turn-helix J154_01453 PF09856 Predicted transcriptional regulator (DUF2083) J154_01453 PF06114 IrrE N-terminal-like domain J154_01454 PF00171 Aldehyde dehydrogenase family J154_01455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_01455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_01455 PF02770 Acyl-CoA dehydrogenase, middle domain J154_01456 PF00378 Enoyl-CoA hydratase/isomerase J154_01457 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J154_01457 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J154_01457 PF00378 Enoyl-CoA hydratase/isomerase J154_01458 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J154_01458 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J154_01459 PF01545 Cation efflux family J154_01460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J154_01460 PF00378 Enoyl-CoA hydratase/isomerase J154_01460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J154_01461 PF08281 Sigma-70, region 4 J154_01461 PF04542 Sigma-70 region 2 J154_01463 PF13180 PDZ domain J154_01464 PF00679 Elongation factor G C-terminus J154_01464 PF06421 GTP-binding protein LepA C-terminus J154_01464 PF03144 Elongation factor Tu domain 2 J154_01464 PF00009 Elongation factor Tu GTP binding domain J154_01465 PF10502 Signal peptidase, peptidase S26 J154_01467 PF14622 Ribonuclease-III-like J154_01467 PF00035 Double-stranded RNA binding motif J154_01468 PF01926 50S ribosome-binding GTPase J154_01468 PF07650 KH domain J154_01469 PF02565 Recombination protein O C terminal J154_01469 PF11967 Recombination protein O N terminal J154_01471 PF05958 tRNA (Uracil-5-)-methyltransferase J154_01473 PF01323 DSBA-like thioredoxin domain J154_01474 PF01593 Flavin containing amine oxidoreductase J154_01475 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J154_01476 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_01478 PF01048 Phosphorylase superfamily J154_01479 PF00313 'Cold-shock' DNA-binding domain J154_01480 PF01494 FAD binding domain J154_01482 PF00270 DEAD/DEAH box helicase J154_01482 PF08494 DEAD/H associated J154_01482 PF00271 Helicase conserved C-terminal domain J154_01483 PF04679 ATP dependent DNA ligase C terminal region J154_01483 PF01068 ATP dependent DNA ligase domain J154_01483 PF04675 DNA ligase N terminus J154_01485 PF01068 ATP dependent DNA ligase domain J154_01485 PF04679 ATP dependent DNA ligase C terminal region J154_01485 PF04675 DNA ligase N terminus J154_01488 PF00072 Response regulator receiver domain J154_01488 PF00990 Diguanylate cyclase, GGDEF domain J154_01491 PF00108 Thiolase, N-terminal domain J154_01491 PF02803 Thiolase, C-terminal domain J154_01492 PF12951 Passenger-associated-transport-repeat J154_01492 PF03797 Autotransporter beta-domain J154_01492 PF00082 Subtilase family J154_01493 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J154_01493 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J154_01495 PF01863 Protein of unknown function DUF45 J154_01496 PF07043 Protein of unknown function (DUF1328) J154_01498 PF01258 Prokaryotic dksA/traR C4-type zinc finger J154_01502 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J154_01504 PF03831 PhnA domain J154_01504 PF08274 PhnA Zinc-Ribbon J154_01505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J154_01506 PF07690 Major Facilitator Superfamily J154_01513 PF09924 Uncharacterised conserved protein (DUF2156) J154_01513 PF03706 Lysylphosphatidylglycerol synthase TM region J154_01516 PF01042 Endoribonuclease L-PSP J154_01525 PF04545 Sigma-70, region 4 J154_01525 PF04542 Sigma-70 region 2 J154_01528 PF04060 Putative Fe-S cluster J154_01530 PF01588 Putative tRNA binding domain J154_01530 PF09334 tRNA synthetases class I (M) J154_01533 PF13732 Domain of unknown function (DUF4162) J154_01533 PF00005 ABC transporter J154_01534 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J154_01535 PF00324 Amino acid permease J154_01536 PF02574 Homocysteine S-methyltransferase J154_01538 PF02592 Putative vitamin uptake transporter J154_01542 PF03551 Transcriptional regulator PadR-like family J154_01549 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J154_01550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J154_01550 PF01336 OB-fold nucleic acid binding domain J154_01550 PF02811 PHP domain J154_01550 PF07733 Bacterial DNA polymerase III alpha NTPase domain J154_01550 PF14579 Helix-hairpin-helix motif J154_01551 PF01351 Ribonuclease HII J154_01552 PF02684 Lipid-A-disaccharide synthetase J154_01553 PF00132 Bacterial transferase hexapeptide (six repeats) J154_01553 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J154_01554 PF07977 FabA-like domain J154_01555 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J154_01555 PF00132 Bacterial transferase hexapeptide (six repeats) J154_01557 PF01103 Surface antigen J154_01557 PF07244 Surface antigen variable number repeat J154_01558 PF17820 PDZ domain J154_01558 PF02163 Peptidase family M50 J154_01559 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J154_01559 PF13288 DXP reductoisomerase C-terminal domain J154_01559 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J154_01561 PF01255 Putative undecaprenyl diphosphate synthase J154_01562 PF01765 Ribosome recycling factor J154_01563 PF00696 Amino acid kinase family J154_01564 PF00072 Response regulator receiver domain J154_01564 PF00990 Diguanylate cyclase, GGDEF domain J154_01565 PF00889 Elongation factor TS J154_01566 PF00318 Ribosomal protein S2 J154_01573 PF00557 Metallopeptidase family M24 J154_01574 PF08335 GlnD PII-uridylyltransferase J154_01574 PF01966 HD domain J154_01574 PF01909 Nucleotidyltransferase domain J154_01575 PF14602 Hexapeptide repeat of succinyl-transferase J154_01575 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J154_01575 PF00132 Bacterial transferase hexapeptide (six repeats) J154_01576 PF03960 ArsC family J154_01577 PF01546 Peptidase family M20/M25/M40 J154_01577 PF07687 Peptidase dimerisation domain J154_01578 PF00733 Asparagine synthase J154_01578 PF13537 Glutamine amidotransferase domain J154_01580 PF00593 TonB dependent receptor J154_01580 PF07715 TonB-dependent Receptor Plug Domain J154_01582 PF01804 Penicillin amidase J154_01583 PF00210 Ferritin-like domain J154_01584 PF05724 Thiopurine S-methyltransferase (TPMT) J154_01586 PF00521 DNA gyrase/topoisomerase IV, subunit A J154_01586 PF03989 DNA gyrase C-terminal domain, beta-propeller J154_01589 PF02321 Outer membrane efflux protein J154_01590 PF00529 HlyD membrane-fusion protein of T1SS J154_01590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_01591 PF07690 Major Facilitator Superfamily J154_01593 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_01593 PF14310 Fibronectin type III-like domain J154_01593 PF01915 Glycosyl hydrolase family 3 C-terminal domain J154_01595 PF00854 POT family J154_01600 PF12802 MarR family J154_01601 PF01432 Peptidase family M3 J154_01602 PF00255 Glutathione peroxidase J154_01603 PF00175 Oxidoreductase NAD-binding domain J154_01603 PF00970 Oxidoreductase FAD-binding domain J154_01604 PF00005 ABC transporter J154_01605 PF05683 Fumarase C-terminus J154_01605 PF05681 Fumarate hydratase (Fumerase) J154_01607 PF00484 Carbonic anhydrase J154_01608 PF02253 Phospholipase A1 J154_01610 PF00313 'Cold-shock' DNA-binding domain J154_01613 PF00899 ThiF family J154_01614 PF01026 TatD related DNase J154_01617 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_01617 PF02770 Acyl-CoA dehydrogenase, middle domain J154_01617 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_01619 PF00043 Glutathione S-transferase, C-terminal domain J154_01619 PF02798 Glutathione S-transferase, N-terminal domain J154_01620 PF13537 Glutamine amidotransferase domain J154_01620 PF00733 Asparagine synthase J154_01621 PF03358 NADPH-dependent FMN reductase J154_01622 PF03796 DnaB-like helicase C terminal domain J154_01622 PF00772 DnaB-like helicase N terminal domain J154_01623 PF03441 FAD binding domain of DNA photolyase J154_01623 PF00875 DNA photolyase J154_01624 PF05736 OprF membrane domain J154_01624 PF00691 OmpA family J154_01626 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01626 PF03466 LysR substrate binding domain J154_01629 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_01629 PF00529 HlyD membrane-fusion protein of T1SS J154_01630 PF00873 AcrB/AcrD/AcrF family J154_01631 PF00106 short chain dehydrogenase J154_01632 PF02321 Outer membrane efflux protein J154_01633 PF00990 Diguanylate cyclase, GGDEF domain J154_01633 PF08448 PAS fold J154_01635 PF00990 Diguanylate cyclase, GGDEF domain J154_01652 PF01527 Transposase J154_01661 PF00082 Subtilase family J154_01662 PF01668 SmpB protein J154_01663 PF03364 Polyketide cyclase / dehydrase and lipid transport J154_01664 PF03658 RnfH family Ubiquitin J154_01665 PF04355 SmpA / OmlA family J154_01666 PF01475 Ferric uptake regulator family J154_01667 PF02463 RecF/RecN/SMC N terminal domain J154_01668 PF01628 HrcA protein C terminal domain J154_01668 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J154_01669 PF01025 GrpE J154_01670 PF00012 Hsp70 protein J154_01671 PF00226 DnaJ domain J154_01671 PF01556 DnaJ C terminal domain J154_01671 PF00684 DnaJ central domain J154_01673 PF08543 Phosphomethylpyrimidine kinase J154_01678 PF00005 ABC transporter J154_01678 PF00664 ABC transporter transmembrane region J154_01678 PF03412 Peptidase C39 family J154_01679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01679 PF03466 LysR substrate binding domain J154_01680 PF00005 ABC transporter J154_01680 PF00664 ABC transporter transmembrane region J154_01681 PF01205 Uncharacterized protein family UPF0029 J154_01682 PF03641 Possible lysine decarboxylase J154_01683 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_01683 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J154_01684 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J154_01684 PF00364 Biotin-requiring enzyme J154_01684 PF02817 e3 binding domain J154_01685 PF00676 Dehydrogenase E1 component J154_01685 PF16870 2-oxoglutarate dehydrogenase C-terminal J154_01685 PF02779 Transketolase, pyrimidine binding domain J154_01685 PF16078 2-oxoglutarate dehydrogenase N-terminus J154_01687 PF08007 Cupin superfamily protein J154_01689 PF00206 Lyase J154_01689 PF08328 Adenylosuccinate lyase C-terminal J154_01691 PF01595 Cyclin M transmembrane N-terminal domain J154_01691 PF03471 Transporter associated domain J154_01691 PF00571 CBS domain J154_01692 PF00206 Lyase J154_01692 PF10415 Fumarase C C-terminus J154_01697 PF00005 ABC transporter J154_01698 PF00392 Bacterial regulatory proteins, gntR family J154_01700 PF00255 Glutathione peroxidase J154_01701 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J154_01701 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J154_01702 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J154_01702 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J154_01702 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J154_01703 PF04102 SlyX J154_01706 PF00356 Bacterial regulatory proteins, lacI family J154_01707 PF07690 Major Facilitator Superfamily J154_01708 PF00294 pfkB family carbohydrate kinase J154_01710 PF00809 Pterin binding enzyme J154_01710 PF02574 Homocysteine S-methyltransferase J154_01710 PF02607 B12 binding domain J154_01710 PF02965 Vitamin B12 dependent methionine synthase, activation domain J154_01710 PF02310 B12 binding domain J154_01711 PF00809 Pterin binding enzyme J154_01711 PF02574 Homocysteine S-methyltransferase J154_01712 PF01209 ubiE/COQ5 methyltransferase family J154_01713 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_01713 PF02770 Acyl-CoA dehydrogenase, middle domain J154_01713 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_01716 PF08206 Ribonuclease B OB domain J154_01716 PF08461 Ribonuclease R winged-helix domain J154_01716 PF17876 Cold shock domain J154_01716 PF00773 RNB domain J154_01716 PF00575 S1 RNA binding domain J154_01718 PF08032 RNA 2'-O ribose methyltransferase substrate binding J154_01718 PF00588 SpoU rRNA Methylase family J154_01719 PF00990 Diguanylate cyclase, GGDEF domain J154_01719 PF07694 5TMR of 5TMR-LYT J154_01720 PF00929 Exonuclease J154_01722 PF01895 PhoU domain J154_01723 PF00005 ABC transporter J154_01724 PF00528 Binding-protein-dependent transport system inner membrane component J154_01725 PF00528 Binding-protein-dependent transport system inner membrane component J154_01726 PF12849 PBP superfamily domain J154_01727 PF12849 PBP superfamily domain J154_01730 PF00484 Carbonic anhydrase J154_01731 PF01740 STAS domain J154_01731 PF00916 Sulfate permease family J154_01732 PF10576 Iron-sulfur binding domain of endonuclease III J154_01732 PF00730 HhH-GPD superfamily base excision DNA repair protein J154_01732 PF00633 Helix-hairpin-helix motif J154_01734 PF00378 Enoyl-CoA hydratase/isomerase J154_01735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J154_01735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J154_01736 PF00293 NUDIX domain J154_01737 PF00581 Rhodanese-like domain J154_01744 PF10672 S-adenosylmethionine-dependent methyltransferase J154_01744 PF02926 THUMP domain J154_01744 PF01170 Putative RNA methylase family UPF0020 J154_01745 PF01513 ATP-NAD kinase J154_01749 PF08411 Exonuclease C-terminal J154_01749 PF00929 Exonuclease J154_01750 PF01494 FAD binding domain J154_01751 PF00266 Aminotransferase class-V J154_01753 PF06052 3-hydroxyanthranilic acid dioxygenase J154_01754 PF00484 Carbonic anhydrase J154_01763 PF00072 Response regulator receiver domain J154_01763 PF00196 Bacterial regulatory proteins, luxR family J154_01766 PF04299 Putative FMN-binding domain J154_01770 PF00152 tRNA synthetases class II (D, K and N) J154_01770 PF01336 OB-fold nucleic acid binding domain J154_01771 PF01521 Iron-sulphur cluster biosynthesis J154_01772 PF01250 Ribosomal protein S6 J154_01773 PF01084 Ribosomal protein S18 J154_01774 PF01281 Ribosomal protein L9, N-terminal domain J154_01774 PF03948 Ribosomal protein L9, C-terminal domain J154_01775 PF02463 RecF/RecN/SMC N terminal domain J154_01776 PF04354 ZipA, C-terminal FtsZ-binding domain J154_01778 PF00155 Aminotransferase class I and II J154_01779 PF12826 Helix-hairpin-helix motif J154_01779 PF03120 NAD-dependent DNA ligase OB-fold domain J154_01779 PF00533 BRCA1 C Terminus (BRCT) domain J154_01779 PF01653 NAD-dependent DNA ligase adenylation domain J154_01779 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J154_01780 PF00152 tRNA synthetases class II (D, K and N) J154_01782 PF01008 Initiation factor 2 subunit family J154_01783 PF03989 DNA gyrase C-terminal domain, beta-propeller J154_01783 PF00521 DNA gyrase/topoisomerase IV, subunit A J154_01784 PF13360 PQQ-like domain J154_01786 PF01175 Urocanase Rossmann-like domain J154_01786 PF17391 Urocanase N-terminal domain J154_01786 PF17392 Urocanase C-terminal domain J154_01788 PF00221 Aromatic amino acid lyase J154_01789 PF07969 Amidohydrolase family J154_01791 PF00392 Bacterial regulatory proteins, gntR family J154_01791 PF07702 UTRA domain J154_01797 PF01794 Ferric reductase like transmembrane component J154_01798 PF00174 Oxidoreductase molybdopterin binding domain J154_01799 PF00266 Aminotransferase class-V J154_01800 PF01842 ACT domain J154_01800 PF01817 Chorismate mutase type II J154_01800 PF00800 Prephenate dehydratase J154_01801 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J154_01803 PF03544 Gram-negative bacterial TonB protein C-terminal J154_01804 PF02403 Seryl-tRNA synthetase N-terminal domain J154_01804 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J154_01805 PF02525 Flavodoxin-like fold J154_01806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01806 PF03466 LysR substrate binding domain J154_01809 PF02203 Tar ligand binding domain homologue J154_01809 PF00672 HAMP domain J154_01809 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_01812 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01812 PF00072 Response regulator receiver domain J154_01812 PF00512 His Kinase A (phospho-acceptor) domain J154_01812 PF13188 PAS domain J154_01812 PF08448 PAS fold J154_01813 PF00486 Transcriptional regulatory protein, C terminal J154_01813 PF00072 Response regulator receiver domain J154_01814 PF06745 KaiC J154_01815 PF00072 Response regulator receiver domain J154_01815 PF13426 PAS domain J154_01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01817 PF03918 Cytochrome C biogenesis protein J154_01818 PF08534 Redoxin J154_01819 PF01578 Cytochrome C assembly protein J154_01819 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J154_01820 PF03100 CcmE J154_01822 PF01578 Cytochrome C assembly protein J154_01823 PF00082 Subtilase family J154_01825 PF04542 Sigma-70 region 2 J154_01825 PF08281 Sigma-70, region 4 J154_01828 PF00034 Cytochrome c J154_01831 PF05523 WxcM-like, C-terminal J154_01835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J154_01836 PF01943 Polysaccharide biosynthesis protein J154_01837 PF00535 Glycosyl transferase family 2 J154_01840 PF08241 Methyltransferase domain J154_01844 PF00534 Glycosyl transferases group 1 J154_01844 PF13579 Glycosyl transferase 4-like domain J154_01847 PF00005 ABC transporter J154_01848 PF00005 ABC transporter J154_01848 PF00664 ABC transporter transmembrane region J154_01849 PF07690 Major Facilitator Superfamily J154_01850 PF00296 Luciferase-like monooxygenase J154_01853 PF00571 CBS domain J154_01853 PF01595 Cyclin M transmembrane N-terminal domain J154_01853 PF03471 Transporter associated domain J154_01855 PF01384 Phosphate transporter family J154_01858 PF00986 DNA gyrase B subunit, carboxyl terminus J154_01858 PF00204 DNA gyrase B J154_01858 PF01751 Toprim domain J154_01858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_01860 PF06418 CTP synthase N-terminus J154_01860 PF00117 Glutamine amidotransferase class-I J154_01861 PF00793 DAHP synthetase I family J154_01863 PF00113 Enolase, C-terminal TIM barrel domain J154_01863 PF03952 Enolase, N-terminal domain J154_01864 PF04977 Septum formation initiator J154_01865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J154_01866 PF02542 YgbB family J154_01867 PF01142 tRNA pseudouridine synthase D (TruD) J154_01868 PF01713 Smr domain J154_01869 PF01975 Survival protein SurE J154_01871 PF09335 SNARE associated Golgi protein J154_01872 PF01551 Peptidase family M23 J154_01872 PF01476 LysM domain J154_01874 PF04430 Protein of unknown function (DUF498/DUF598) J154_01875 PF01985 CRS1 / YhbY (CRM) domain J154_01876 PF01728 FtsJ-like methyltransferase J154_01877 PF01434 Peptidase family M41 J154_01877 PF06480 FtsH Extracellular J154_01877 PF00004 ATPase family associated with various cellular activities (AAA) J154_01877 PF17862 AAA+ lid domain J154_01878 PF00809 Pterin binding enzyme J154_01880 PF17209 Hfq protein J154_01881 PF16360 GTP-binding GTPase Middle Region J154_01881 PF01926 50S ribosome-binding GTPase J154_01881 PF13167 GTP-binding GTPase N-terminal J154_01882 PF02464 Competence-damaged protein J154_01883 PF03109 ABC1 family J154_01884 PF00717 Peptidase S24-like J154_01884 PF01726 LexA DNA binding domain J154_01885 PF00154 recA bacterial DNA recombination protein J154_01886 PF02631 RecX family J154_01887 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J154_01887 PF01411 tRNA synthetases class II (A) J154_01887 PF02272 DHHA1 domain J154_01888 PF02599 Global regulator protein family J154_01890 PF13426 PAS domain J154_01890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_01890 PF08447 PAS fold J154_01891 PF02678 Pirin J154_01891 PF17954 Quercetinase C-terminal cupin domain J154_01892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01892 PF03466 LysR substrate binding domain J154_01897 PF08543 Phosphomethylpyrimidine kinase J154_01897 PF02581 Thiamine monophosphate synthase J154_01900 PF13638 PIN domain J154_01900 PF02562 PhoH-like protein J154_01901 PF00578 AhpC/TSA family J154_01904 PF00701 Dihydrodipicolinate synthetase family J154_01906 PF11953 Domain of unknown function (DUF3470) J154_01906 PF00037 4Fe-4S binding domain J154_01907 PF05035 2-keto-3-deoxy-galactonokinase J154_01908 PF08450 SMP-30/Gluconolactonase/LRE-like region J154_01909 PF13378 Enolase C-terminal domain-like J154_01909 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J154_01910 PF01081 KDPG and KHG aldolase J154_01912 PF03466 LysR substrate binding domain J154_01912 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_01915 PF00942 Cellulose binding domain J154_01915 PF03442 Carbohydrate binding domain X2 J154_01918 PF01055 Glycosyl hydrolases family 31 J154_01918 PF17137 Domain of unknown function (DUF5110) J154_01918 PF16338 Domain of unknown function (DUF4968) J154_01920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J154_01920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J154_01922 PF00083 Sugar (and other) transporter J154_01925 PF01520 N-acetylmuramoyl-L-alanine amidase J154_01926 PF02649 Type I GTP cyclohydrolase folE2 J154_01930 PF12626 Polymerase A arginine-rich C-terminus J154_01930 PF01743 Poly A polymerase head domain J154_01930 PF12627 Probable RNA and SrmB- binding site of polymerase A J154_01931 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J154_01932 PF02548 Ketopantoate hydroxymethyltransferase J154_01933 PF02569 Pantoate-beta-alanine ligase J154_01934 PF02261 Aspartate decarboxylase J154_01935 PF00342 Phosphoglucose isomerase J154_01939 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_01939 PF01915 Glycosyl hydrolase family 3 C-terminal domain J154_01939 PF14310 Fibronectin type III-like domain J154_01940 PF00474 Sodium:solute symporter family J154_01941 PF00563 EAL domain J154_01941 PF00990 Diguanylate cyclase, GGDEF domain J154_01941 PF00360 Phytochrome region J154_01941 PF01590 GAF domain J154_01942 PF00150 Cellulase (glycosyl hydrolase family 5) J154_01942 PF02013 Cellulose or protein binding domain J154_01943 PF00072 Response regulator receiver domain J154_01945 PF04551 GcpE protein J154_01946 PF01569 PAP2 superfamily J154_01947 PF07690 Major Facilitator Superfamily J154_01948 PF01177 Asp/Glu/Hydantoin racemase J154_01949 PF00892 EamA-like transporter family J154_01950 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J154_01950 PF01565 FAD binding domain J154_01951 PF01180 Dihydroorotate dehydrogenase J154_01954 PF00171 Aldehyde dehydrogenase family J154_01957 PF00535 Glycosyl transferase family 2 J154_01958 PF01522 Polysaccharide deacetylase J154_01958 PF14883 Hypothetical glycosyl hydrolase family 13 J154_01960 PF17287 POTRA domain J154_01960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J154_01960 PF08479 POTRA domain, ShlB-type J154_01961 PF13332 Hemagglutinin repeat J154_01961 PF04829 Pre-toxin domain with VENN motif J154_01961 PF05594 Haemagluttinin repeat J154_01962 PF05594 Haemagluttinin repeat J154_01962 PF13332 Hemagglutinin repeat J154_01962 PF04829 Pre-toxin domain with VENN motif J154_01964 PF13018 Extended Signal Peptide of Type V secretion system J154_01964 PF05860 haemagglutination activity domain J154_01964 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J154_01964 PF13332 Hemagglutinin repeat J154_01964 PF05594 Haemagluttinin repeat J154_01966 PF13840 ACT domain J154_01966 PF00742 Homoserine dehydrogenase J154_01966 PF03447 Homoserine dehydrogenase, NAD binding domain J154_01966 PF01842 ACT domain J154_01966 PF00696 Amino acid kinase family J154_01967 PF00288 GHMP kinases N terminal domain J154_01967 PF08544 GHMP kinases C terminal J154_01969 PF14821 Threonine synthase N terminus J154_01969 PF00291 Pyridoxal-phosphate dependent enzyme J154_01971 PF00027 Cyclic nucleotide-binding domain J154_01971 PF13545 Crp-like helix-turn-helix domain J154_01972 PF03129 Anticodon binding domain J154_01972 PF13393 Histidyl-tRNA synthetase J154_01974 PF01634 ATP phosphoribosyltransferase J154_01974 PF08029 HisG, C-terminal domain J154_01975 PF00815 Histidinol dehydrogenase J154_01976 PF00155 Aminotransferase class I and II J154_01977 PF00475 Imidazoleglycerol-phosphate dehydratase J154_01978 PF00117 Glutamine amidotransferase class-I J154_01979 PF00977 Histidine biosynthesis protein J154_01980 PF00977 Histidine biosynthesis protein J154_01981 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J154_01981 PF01502 Phosphoribosyl-AMP cyclohydrolase J154_01985 PF03079 ARD/ARD' family J154_01986 PF00596 Class II Aldolase and Adducin N-terminal domain J154_01987 PF13520 Amino acid permease J154_01988 PF13520 Amino acid permease J154_01990 PF01842 ACT domain J154_01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J154_01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J154_01991 PF02913 FAD linked oxidases, C-terminal domain J154_01991 PF01565 FAD binding domain J154_01995 PF08207 Elongation factor P (EF-P) KOW-like domain J154_01995 PF09285 Elongation factor P, C-terminal J154_01995 PF01132 Elongation factor P (EF-P) OB domain J154_01996 PF00106 short chain dehydrogenase J154_01997 PF00682 HMGL-like J154_01999 PF00378 Enoyl-CoA hydratase/isomerase J154_02001 PF07670 Nucleoside recognition J154_02001 PF02421 Ferrous iron transport protein B J154_02001 PF07664 Ferrous iron transport protein B C terminus J154_02004 PF00155 Aminotransferase class I and II J154_02005 PF03475 3-alpha domain J154_02005 PF03473 MOSC domain J154_02006 PF05173 Dihydrodipicolinate reductase, C-terminus J154_02006 PF01113 Dihydrodipicolinate reductase, N-terminus J154_02007 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J154_02007 PF00117 Glutamine amidotransferase class-I J154_02009 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J154_02009 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J154_02009 PF02142 MGS-like domain J154_02010 PF01272 Transcription elongation factor, GreA/GreB, C-term J154_02010 PF03449 Transcription elongation factor, N-terminal J154_02012 PF17768 RecJ OB domain J154_02012 PF01368 DHH family J154_02012 PF02272 DHHA1 domain J154_02020 PF04397 LytTr DNA-binding domain J154_02020 PF00072 Response regulator receiver domain J154_02021 PF03462 PCRF domain J154_02021 PF00472 RF-1 domain J154_02022 PF01336 OB-fold nucleic acid binding domain J154_02022 PF00152 tRNA synthetases class II (D, K and N) J154_02023 PF00072 Response regulator receiver domain J154_02024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02024 PF00512 His Kinase A (phospho-acceptor) domain J154_02024 PF01627 Hpt domain J154_02024 PF00072 Response regulator receiver domain J154_02025 PF00378 Enoyl-CoA hydratase/isomerase J154_02026 PF13193 AMP-binding enzyme C-terminal domain J154_02026 PF00501 AMP-binding enzyme J154_02028 PF00694 Aconitase C-terminal domain J154_02028 PF00330 Aconitase family (aconitate hydratase) J154_02031 PF00330 Aconitase family (aconitate hydratase) J154_02031 PF06434 Aconitate hydratase 2 N-terminus J154_02031 PF11791 Aconitate B N-terminal domain J154_02032 PF00561 alpha/beta hydrolase fold J154_02033 PF00563 EAL domain J154_02033 PF03707 Bacterial signalling protein N terminal repeat J154_02033 PF00990 Diguanylate cyclase, GGDEF domain J154_02034 PF00072 Response regulator receiver domain J154_02034 PF01339 CheB methylesterase J154_02035 PF03975 CheD chemotactic sensory transduction J154_02036 PF01739 CheR methyltransferase, SAM binding domain J154_02036 PF03705 CheR methyltransferase, all-alpha domain J154_02037 PF02203 Tar ligand binding domain homologue J154_02037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02037 PF00672 HAMP domain J154_02038 PF00672 HAMP domain J154_02038 PF02203 Tar ligand binding domain homologue J154_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02039 PF00672 HAMP domain J154_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02039 PF02203 Tar ligand binding domain homologue J154_02040 PF00672 HAMP domain J154_02040 PF02203 Tar ligand binding domain homologue J154_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02041 PF00672 HAMP domain J154_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02041 PF02203 Tar ligand binding domain homologue J154_02042 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02042 PF00672 HAMP domain J154_02043 PF00672 HAMP domain J154_02043 PF02203 Tar ligand binding domain homologue J154_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02045 PF00672 HAMP domain J154_02045 PF02203 Tar ligand binding domain homologue J154_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02046 PF00672 HAMP domain J154_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02046 PF17200 Single Cache domain 2 J154_02046 PF00672 HAMP domain J154_02046 PF17200 Single Cache domain 2 J154_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02048 PF02203 Tar ligand binding domain homologue J154_02048 PF00672 HAMP domain J154_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02049 PF01627 Hpt domain J154_02049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02049 PF02895 Signal transducing histidine kinase, homodimeric domain J154_02049 PF09078 CheY binding J154_02049 PF01584 CheW-like domain J154_02050 PF00072 Response regulator receiver domain J154_02052 PF01584 CheW-like domain J154_02053 PF13614 AAA domain J154_02054 PF00691 OmpA family J154_02054 PF13677 Membrane MotB of proton-channel complex MotA/MotB J154_02055 PF01618 MotA/TolQ/ExbB proton channel family J154_02058 PF00069 Protein kinase domain J154_02058 PF03793 PASTA domain J154_02067 PF13276 HTH-like domain J154_02067 PF13333 Integrase core domain J154_02067 PF00665 Integrase core domain J154_02068 PF01527 Transposase J154_02074 PF13186 Iron-sulfur cluster-binding domain J154_02074 PF04055 Radical SAM superfamily J154_02077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02077 PF01627 Hpt domain J154_02077 PF07194 P2 response regulator binding domain J154_02077 PF02895 Signal transducing histidine kinase, homodimeric domain J154_02077 PF01584 CheW-like domain J154_02078 PF04344 Chemotaxis phosphatase, CheZ J154_02079 PF00072 Response regulator receiver domain J154_02080 PF04542 Sigma-70 region 2 J154_02080 PF04545 Sigma-70, region 4 J154_02080 PF04539 Sigma-70 region 3 J154_02081 PF10609 NUBPL iron-transfer P-loop NTPase J154_02082 PF00448 SRP54-type protein, GTPase domain J154_02083 PF00771 FHIPEP family J154_02084 PF01312 FlhB HrpN YscU SpaS Family J154_02085 PF03707 Bacterial signalling protein N terminal repeat J154_02085 PF00990 Diguanylate cyclase, GGDEF domain J154_02085 PF00563 EAL domain J154_02086 PF00990 Diguanylate cyclase, GGDEF domain J154_02086 PF13188 PAS domain J154_02086 PF03707 Bacterial signalling protein N terminal repeat J154_02086 PF00563 EAL domain J154_02087 PF00563 EAL domain J154_02087 PF03707 Bacterial signalling protein N terminal repeat J154_02087 PF00990 Diguanylate cyclase, GGDEF domain J154_02087 PF13188 PAS domain J154_02088 PF01311 Bacterial export proteins, family 1 J154_02089 PF01313 Bacterial export proteins, family 3 J154_02091 PF00813 FliP family J154_02092 PF04347 Flagellar biosynthesis protein, FliO J154_02093 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J154_02094 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J154_02094 PF02154 Flagellar motor switch protein FliM J154_02098 PF18269 T3SS EscN ATPase C-terminal domain J154_02098 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J154_02100 PF14841 FliG middle domain J154_02100 PF01706 FliG C-terminal domain J154_02100 PF14842 FliG N-terminal domain J154_02101 PF08345 Flagellar M-ring protein C-terminal J154_02101 PF01514 Secretory protein of YscJ/FliF family J154_02102 PF02049 Flagellar hook-basal body complex protein FliE J154_02103 PF00534 Glycosyl transferases group 1 J154_02103 PF00535 Glycosyl transferase family 2 J154_02111 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J154_02111 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J154_02113 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J154_02114 PF00072 Response regulator receiver domain J154_02114 PF00158 Sigma-54 interaction domain J154_02114 PF02954 Bacterial regulatory protein, Fis family J154_02115 PF00072 Response regulator receiver domain J154_02115 PF01339 CheB methylesterase J154_02116 PF04552 Sigma-54, DNA binding domain J154_02116 PF04963 Sigma-54 factor, core binding domain J154_02116 PF00309 Sigma-54 factor, Activator interacting domain (AID) J154_02117 PF00072 Response regulator receiver domain J154_02117 PF00196 Bacterial regulatory proteins, luxR family J154_02120 PF02561 Flagellar protein FliS J154_02121 PF02465 Flagellar hook-associated protein 2 N-terminus J154_02121 PF07196 Flagellin hook IN motif J154_02121 PF07195 Flagellar hook-associated protein 2 C-terminus J154_02122 PF00700 Bacterial flagellin C-terminal helical region J154_02122 PF00669 Bacterial flagellin N-terminal helical region J154_02123 PF00669 Bacterial flagellin N-terminal helical region J154_02123 PF00700 Bacterial flagellin C-terminal helical region J154_02124 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J154_02124 PF07196 Flagellin hook IN motif J154_02125 PF10135 Rod binding protein J154_02125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J154_02126 PF02119 Flagellar P-ring protein J154_02127 PF02107 Flagellar L-ring protein J154_02128 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J154_02128 PF00460 Flagella basal body rod protein J154_02129 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J154_02129 PF00460 Flagella basal body rod protein J154_02130 PF00460 Flagella basal body rod protein J154_02130 PF07559 Flagellar basal body protein FlaE J154_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J154_02131 PF03963 Flagellar hook capping protein - N-terminal region J154_02132 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J154_02132 PF00460 Flagella basal body rod protein J154_02134 PF01584 CheW-like domain J154_02134 PF00072 Response regulator receiver domain J154_02138 PF00512 His Kinase A (phospho-acceptor) domain J154_02138 PF00989 PAS fold J154_02138 PF13188 PAS domain J154_02138 PF13426 PAS domain J154_02138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02139 PF00563 EAL domain J154_02139 PF03707 Bacterial signalling protein N terminal repeat J154_02139 PF00990 Diguanylate cyclase, GGDEF domain J154_02140 PF07730 Histidine kinase J154_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02141 PF03707 Bacterial signalling protein N terminal repeat J154_02141 PF00990 Diguanylate cyclase, GGDEF domain J154_02141 PF00563 EAL domain J154_02143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02143 PF00672 HAMP domain J154_02143 PF12729 Four helix bundle sensory module for signal transduction J154_02144 PF04356 Protein of unknown function (DUF489) J154_02146 PF00293 NUDIX domain J154_02147 PF02617 ATP-dependent Clp protease adaptor protein ClpS J154_02148 PF02861 Clp amino terminal domain, pathogenicity island component J154_02148 PF17871 AAA lid domain J154_02148 PF10431 C-terminal, D2-small domain, of ClpB protein J154_02148 PF07724 AAA domain (Cdc48 subfamily) J154_02148 PF00004 ATPase family associated with various cellular activities (AAA) J154_02149 PF01176 Translation initiation factor 1A / IF-1 J154_02150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J154_02152 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_02153 PF17854 FtsK alpha domain J154_02153 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J154_02153 PF09397 Ftsk gamma domain J154_02153 PF01580 FtsK/SpoIIIE family J154_02155 PF03548 Outer membrane lipoprotein carrier protein LolA J154_02157 PF12002 MgsA AAA+ ATPase C terminal J154_02157 PF16193 AAA C-terminal domain J154_02157 PF00004 ATPase family associated with various cellular activities (AAA) J154_02159 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J154_02161 PF02803 Thiolase, C-terminal domain J154_02161 PF00108 Thiolase, N-terminal domain J154_02162 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J154_02162 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J154_02162 PF00378 Enoyl-CoA hydratase/isomerase J154_02164 PF00334 Nucleoside diphosphate kinase J154_02165 PF04055 Radical SAM superfamily J154_02167 PF13464 Domain of unknown function (DUF4115) J154_02169 PF13360 PQQ-like domain J154_02169 PF01011 PQQ enzyme repeat J154_02170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J154_02170 PF01926 50S ribosome-binding GTPase J154_02171 PF00994 Probable molybdopterin binding domain J154_02171 PF03454 MoeA C-terminal region (domain IV) J154_02171 PF03453 MoeA N-terminal region (domain I and II) J154_02172 PF00899 ThiF family J154_02177 PF08240 Alcohol dehydrogenase GroES-like domain J154_02177 PF13823 Alcohol dehydrogenase GroES-associated J154_02177 PF00107 Zinc-binding dehydrogenase J154_02179 PF03372 Endonuclease/Exonuclease/phosphatase family J154_02181 PF00994 Probable molybdopterin binding domain J154_02181 PF03454 MoeA C-terminal region (domain IV) J154_02181 PF03453 MoeA N-terminal region (domain I and II) J154_02182 PF12804 MobA-like NTP transferase domain J154_02184 PF00561 alpha/beta hydrolase fold J154_02185 PF01566 Natural resistance-associated macrophage protein J154_02186 PF01325 Iron dependent repressor, N-terminal DNA binding domain J154_02186 PF02742 Iron dependent repressor, metal binding and dimerisation domain J154_02187 PF14437 MafB19-like deaminase J154_02188 PF00929 Exonuclease J154_02189 PF05552 Conserved TM helix J154_02189 PF00924 Mechanosensitive ion channel J154_02190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J154_02190 PF02896 PEP-utilising enzyme, TIM barrel domain J154_02190 PF00391 PEP-utilising enzyme, mobile domain J154_02191 PF03618 Kinase/pyrophosphorylase J154_02195 PF01066 CDP-alcohol phosphatidyltransferase J154_02197 PF00561 alpha/beta hydrolase fold J154_02200 PF01266 FAD dependent oxidoreductase J154_02200 PF00355 Rieske [2Fe-2S] domain J154_02202 PF16921 Tex protein YqgF-like domain J154_02202 PF17674 HHH domain J154_02202 PF00575 S1 RNA binding domain J154_02202 PF09371 Tex-like protein N-terminal domain J154_02203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02203 PF09308 LuxQ, periplasmic J154_02203 PF00072 Response regulator receiver domain J154_02203 PF00512 His Kinase A (phospho-acceptor) domain J154_02211 PF00034 Cytochrome c J154_02213 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_02214 PF00873 AcrB/AcrD/AcrF family J154_02215 PF00873 AcrB/AcrD/AcrF family J154_02216 PF01081 KDPG and KHG aldolase J154_02217 PF00920 Dehydratase family J154_02218 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J154_02219 PF02685 Glucokinase J154_02220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J154_02220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J154_02221 PF17912 MalK OB fold domain J154_02221 PF00005 ABC transporter J154_02224 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J154_02225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J154_02226 PF00890 FAD binding domain J154_02226 PF02910 Fumarate reductase flavoprotein C-term J154_02228 PF13085 2Fe-2S iron-sulfur cluster binding domain J154_02229 PF03937 Flavinator of succinate dehydrogenase J154_02231 PF02687 FtsX-like permease family J154_02231 PF12704 MacB-like periplasmic core domain J154_02232 PF00005 ABC transporter J154_02234 PF03772 Competence protein J154_02234 PF00753 Metallo-beta-lactamase superfamily J154_02235 PF01618 MotA/TolQ/ExbB proton channel family J154_02236 PF02472 Biopolymer transport protein ExbD/TolR J154_02237 PF00664 ABC transporter transmembrane region J154_02237 PF00005 ABC transporter J154_02238 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J154_02239 PF02348 Cytidylyltransferase J154_02240 PF01451 Low molecular weight phosphotyrosine protein phosphatase J154_02242 PF02151 UvrB/uvrC motif J154_02242 PF01541 GIY-YIG catalytic domain J154_02242 PF08459 UvrC Helix-hairpin-helix N-terminal J154_02243 PF01066 CDP-alcohol phosphatidyltransferase J154_02247 PF00668 Condensation domain J154_02247 PF13193 AMP-binding enzyme C-terminal domain J154_02247 PF00550 Phosphopantetheine attachment site J154_02247 PF00501 AMP-binding enzyme J154_02248 PF00668 Condensation domain J154_02248 PF00550 Phosphopantetheine attachment site J154_02248 PF13193 AMP-binding enzyme C-terminal domain J154_02248 PF00501 AMP-binding enzyme J154_02248 PF00975 Thioesterase domain J154_02250 PF01527 Transposase J154_02252 PF01527 Transposase J154_02253 PF00589 Phage integrase family J154_02255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J154_02255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J154_02255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J154_02257 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J154_02260 PF00072 Response regulator receiver domain J154_02260 PF00196 Bacterial regulatory proteins, luxR family J154_02261 PF12111 Polyribonucleotide phosphorylase C terminal J154_02261 PF10150 Ribonuclease E/G family J154_02261 PF00575 S1 RNA binding domain J154_02262 PF01479 S4 domain J154_02262 PF00849 RNA pseudouridylate synthase J154_02263 PF11737 Protein of unknown function (DUF3300) J154_02264 PF02535 ZIP Zinc transporter J154_02266 PF01329 Pterin 4 alpha carbinolamine dehydratase J154_02267 PF01106 NifU-like domain J154_02276 PF12697 Alpha/beta hydrolase family J154_02276 PF08241 Methyltransferase domain J154_02278 PF00106 short chain dehydrogenase J154_02282 PF00665 Integrase core domain J154_02282 PF13276 HTH-like domain J154_02282 PF13333 Integrase core domain J154_02283 PF01527 Transposase J154_02284 PF01494 FAD binding domain J154_02285 PF09335 SNARE associated Golgi protein J154_02287 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J154_02288 PF07995 Glucose / Sorbosone dehydrogenase J154_02290 PF00144 Beta-lactamase J154_02291 PF00072 Response regulator receiver domain J154_02291 PF04397 LytTr DNA-binding domain J154_02292 PF06580 Histidine kinase J154_02292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02292 PF07694 5TMR of 5TMR-LYT J154_02294 PF00082 Subtilase family J154_02294 PF03797 Autotransporter beta-domain J154_02295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_02296 PF00873 AcrB/AcrD/AcrF family J154_02298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02298 PF00072 Response regulator receiver domain J154_02298 PF13426 PAS domain J154_02298 PF00512 His Kinase A (phospho-acceptor) domain J154_02298 PF08448 PAS fold J154_02299 PF00072 Response regulator receiver domain J154_02299 PF00196 Bacterial regulatory proteins, luxR family J154_02300 PF12951 Passenger-associated-transport-repeat J154_02300 PF12951 Passenger-associated-transport-repeat J154_02301 PF00990 Diguanylate cyclase, GGDEF domain J154_02301 PF08447 PAS fold J154_02301 PF08448 PAS fold J154_02301 PF00563 EAL domain J154_02304 PF05974 Domain of unknown function (DUF892) J154_02306 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J154_02308 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J154_02308 PF14824 Sirohaem biosynthesis protein central J154_02308 PF10414 Sirohaem synthase dimerisation region J154_02311 PF05977 Transmembrane secretion effector J154_02312 PF07969 Amidohydrolase family J154_02314 PF00857 Isochorismatase family J154_02317 PF00072 Response regulator receiver domain J154_02317 PF00196 Bacterial regulatory proteins, luxR family J154_02320 PF03466 LysR substrate binding domain J154_02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_02321 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J154_02321 PF00361 Proton-conducting membrane transporter J154_02321 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J154_02322 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J154_02323 PF00665 Integrase core domain J154_02323 PF13333 Integrase core domain J154_02323 PF13276 HTH-like domain J154_02324 PF01527 Transposase J154_02325 PF01381 Helix-turn-helix J154_02326 PF05284 Protein of unknown function (DUF736) J154_02327 PF04002 RadC-like JAB domain J154_02332 PF00589 Phage integrase family J154_02332 PF13356 Arm DNA-binding domain J154_02335 PF00593 TonB dependent receptor J154_02335 PF07715 TonB-dependent Receptor Plug Domain J154_02339 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J154_02344 PF00593 TonB dependent receptor J154_02344 PF07715 TonB-dependent Receptor Plug Domain J154_02347 PF10947 Protein of unknown function (DUF2628) J154_02350 PF00722 Glycosyl hydrolases family 16 J154_02350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J154_02355 PF03412 Peptidase C39 family J154_02355 PF00664 ABC transporter transmembrane region J154_02355 PF00005 ABC transporter J154_02357 PF13614 AAA domain J154_02365 PF01131 DNA topoisomerase J154_02365 PF01751 Toprim domain J154_02366 PF00145 C-5 cytosine-specific DNA methylase J154_02378 PF17761 DUF1016 N-terminal domain J154_02378 PF06250 YhcG PDDEXK nuclease domain J154_02379 PF01527 Transposase J154_02380 PF13276 HTH-like domain J154_02380 PF13333 Integrase core domain J154_02380 PF00665 Integrase core domain J154_02381 PF00892 EamA-like transporter family J154_02382 PF00892 EamA-like transporter family J154_02384 PF02525 Flavodoxin-like fold J154_02385 PF02798 Glutathione S-transferase, N-terminal domain J154_02385 PF00043 Glutathione S-transferase, C-terminal domain J154_02386 PF05544 Proline racemase J154_02387 PF03358 NADPH-dependent FMN reductase J154_02389 PF07690 Major Facilitator Superfamily J154_02390 PF12833 Helix-turn-helix domain J154_02390 PF02311 AraC-like ligand binding domain J154_02420 PF00580 UvrD/REP helicase N-terminal domain J154_02420 PF13361 UvrD-like helicase C-terminal domain J154_02420 PF12462 DNA helicase IV / RNA helicase N terminal J154_02435 PF03466 LysR substrate binding domain J154_02435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_02436 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J154_02436 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J154_02437 PF03401 Tripartite tricarboxylate transporter family receptor J154_02441 PF04002 RadC-like JAB domain J154_02448 PF13356 Arm DNA-binding domain J154_02448 PF00589 Phage integrase family J154_02449 PF00117 Glutamine amidotransferase class-I J154_02449 PF02540 NAD synthase J154_02449 PF00958 GMP synthase C terminal domain J154_02450 PF00478 IMP dehydrogenase / GMP reductase domain J154_02450 PF00571 CBS domain J154_02451 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J154_02451 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J154_02453 PF00999 Sodium/hydrogen exchanger family J154_02453 PF02254 TrkA-N domain J154_02454 PF00483 Nucleotidyl transferase J154_02455 PF02719 Polysaccharide biosynthesis protein J154_02456 PF00953 Glycosyl transferase family 4 J154_02457 PF18073 Rubredoxin metal binding domain J154_02459 PF00216 Bacterial DNA-binding protein J154_02460 PF00575 S1 RNA binding domain J154_02461 PF02224 Cytidylate kinase J154_02462 PF00444 Ribosomal protein L36 J154_02465 PF04371 Porphyromonas-type peptidyl-arginine deiminase J154_02466 PF00795 Carbon-nitrogen hydrolase J154_02471 PF00528 Binding-protein-dependent transport system inner membrane component J154_02472 PF00528 Binding-protein-dependent transport system inner membrane component J154_02476 PF00356 Bacterial regulatory proteins, lacI family J154_02478 PF03795 YCII-related domain J154_02479 PF02616 Segregation and condensation protein ScpA J154_02480 PF04079 Segregation and condensation complex subunit ScpB J154_02481 PF01479 S4 domain J154_02481 PF00849 RNA pseudouridylate synthase J154_02484 PF00795 Carbon-nitrogen hydrolase J154_02485 PF00155 Aminotransferase class I and II J154_02486 PF00005 ABC transporter J154_02487 PF03379 CcmB protein J154_02488 PF01578 Cytochrome C assembly protein J154_02490 PF03100 CcmE J154_02491 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J154_02491 PF01578 Cytochrome C assembly protein J154_02492 PF08534 Redoxin J154_02493 PF03918 Cytochrome C biogenesis protein J154_02495 PF00561 alpha/beta hydrolase fold J154_02496 PF00313 'Cold-shock' DNA-binding domain J154_02497 PF00664 ABC transporter transmembrane region J154_02497 PF00005 ABC transporter J154_02498 PF00005 ABC transporter J154_02498 PF00664 ABC transporter transmembrane region J154_02499 PF01654 Cytochrome bd terminal oxidase subunit I J154_02500 PF02322 Cytochrome bd terminal oxidase subunit II J154_02504 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J154_02504 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J154_02505 PF00171 Aldehyde dehydrogenase family J154_02506 PF00696 Amino acid kinase family J154_02506 PF01472 PUA domain J154_02508 PF00206 Lyase J154_02509 PF01118 Semialdehyde dehydrogenase, NAD binding domain J154_02511 PF00696 Amino acid kinase family J154_02511 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J154_02514 PF00764 Arginosuccinate synthase J154_02515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J154_02515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J154_02517 PF09190 DALR domain J154_02517 PF01406 tRNA synthetases class I (C) catalytic domain J154_02518 PF02657 Fe-S metabolism associated domain J154_02520 PF01258 Prokaryotic dksA/traR C4-type zinc finger J154_02521 PF01809 Putative membrane protein insertion efficiency factor J154_02522 PF01979 Amidohydrolase family J154_02523 PF08460 Bacterial SH3 domain J154_02523 PF01551 Peptidase family M23 J154_02526 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J154_02527 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J154_02529 PF00753 Metallo-beta-lactamase superfamily J154_02533 PF01527 Transposase J154_02536 PF00295 Glycosyl hydrolases family 28 J154_02538 PF13419 Haloacid dehalogenase-like hydrolase J154_02540 PF01979 Amidohydrolase family J154_02542 PF01132 Elongation factor P (EF-P) OB domain J154_02542 PF08207 Elongation factor P (EF-P) KOW-like domain J154_02542 PF09285 Elongation factor P, C-terminal J154_02543 PF04055 Radical SAM superfamily J154_02544 PF03707 Bacterial signalling protein N terminal repeat J154_02544 PF00563 EAL domain J154_02544 PF00990 Diguanylate cyclase, GGDEF domain J154_02544 PF13188 PAS domain J154_02546 PF00588 SpoU rRNA Methylase family J154_02547 PF00459 Inositol monophosphatase family J154_02548 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J154_02548 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J154_02549 PF00545 ribonuclease J154_02552 PF00271 Helicase conserved C-terminal domain J154_02552 PF00270 DEAD/DEAH box helicase J154_02552 PF03880 DbpA RNA binding domain J154_02553 PF00156 Phosphoribosyl transferase domain J154_02554 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J154_02555 PF00135 Carboxylesterase family J154_02556 PF02798 Glutathione S-transferase, N-terminal domain J154_02556 PF14497 Glutathione S-transferase, C-terminal domain J154_02557 PF00313 'Cold-shock' DNA-binding domain J154_02558 PF07152 YaeQ protein J154_02560 PF00072 Response regulator receiver domain J154_02560 PF00990 Diguanylate cyclase, GGDEF domain J154_02560 PF00563 EAL domain J154_02561 PF01435 Peptidase family M48 J154_02562 PF00749 tRNA synthetases class I (E and Q), catalytic domain J154_02563 PF00106 short chain dehydrogenase J154_02564 PF05233 PHB accumulation regulatory domain J154_02564 PF07879 PHB/PHA accumulation regulator DNA-binding domain J154_02567 PF08676 MutL C terminal dimerisation domain J154_02567 PF01119 DNA mismatch repair protein, C-terminal domain J154_02568 PF01520 N-acetylmuramoyl-L-alanine amidase J154_02568 PF11741 AMIN domain J154_02569 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J154_02570 PF03853 YjeF-related protein N-terminus J154_02570 PF01256 Carbohydrate kinase J154_02571 PF08331 Domain of unknown function (DUF1730) J154_02572 PF13742 OB-fold nucleic acid binding domain J154_02572 PF02601 Exonuclease VII, large subunit J154_02574 PF03781 Sulfatase-modifying factor enzyme 1 J154_02575 PF01612 3'-5' exonuclease J154_02575 PF00570 HRDC domain J154_02577 PF04679 ATP dependent DNA ligase C terminal region J154_02577 PF13298 DNA polymerase Ligase (LigD) J154_02577 PF01068 ATP dependent DNA ligase domain J154_02581 PF00589 Phage integrase family J154_02585 PF05598 Transposase domain (DUF772) J154_02587 PF01527 Transposase J154_02591 PF01619 Proline dehydrogenase J154_02591 PF14850 DNA-binding domain of Proline dehydrogenase J154_02591 PF00171 Aldehyde dehydrogenase family J154_02591 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J154_02593 PF01527 Transposase J154_02595 PF00665 Integrase core domain J154_02595 PF13276 HTH-like domain J154_02595 PF13333 Integrase core domain J154_02597 PF02796 Helix-turn-helix domain of resolvase J154_02597 PF00239 Resolvase, N terminal domain J154_02600 PF02384 N-6 DNA Methylase J154_02601 PF09572 XamI restriction endonuclease J154_02613 PF01584 CheW-like domain J154_02614 PF12729 Four helix bundle sensory module for signal transduction J154_02614 PF00672 HAMP domain J154_02614 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_02615 PF02245 Methylpurine-DNA glycosylase (MPG) J154_02616 PF00270 DEAD/DEAH box helicase J154_02616 PF00271 Helicase conserved C-terminal domain J154_02616 PF08494 DEAD/H associated J154_02619 PF04386 Stringent starvation protein B J154_02620 PF02798 Glutathione S-transferase, N-terminal domain J154_02620 PF00043 Glutathione S-transferase, C-terminal domain J154_02621 PF02167 Cytochrome C1 family J154_02622 PF00033 Cytochrome b/b6/petB J154_02622 PF00032 Cytochrome b(C-terminal)/b6/petD J154_02623 PF00355 Rieske [2Fe-2S] domain J154_02623 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J154_02624 PF01464 Transglycosylase SLT domain J154_02627 PF04055 Radical SAM superfamily J154_02627 PF01938 TRAM domain J154_02627 PF00919 Uncharacterized protein family UPF0004 J154_02628 PF02562 PhoH-like protein J154_02630 PF02130 Uncharacterized protein family UPF0054 J154_02632 PF00571 CBS domain J154_02632 PF03471 Transporter associated domain J154_02635 PF00171 Aldehyde dehydrogenase family J154_02636 PF00528 Binding-protein-dependent transport system inner membrane component J154_02637 PF00528 Binding-protein-dependent transport system inner membrane component J154_02638 PF08402 TOBE domain J154_02638 PF00005 ABC transporter J154_02639 PF02321 Outer membrane efflux protein J154_02640 PF07690 Major Facilitator Superfamily J154_02641 PF13533 Biotin-lipoyl like J154_02642 PF13416 Bacterial extracellular solute-binding protein J154_02643 PF00202 Aminotransferase class-III J154_02644 PF00120 Glutamine synthetase, catalytic domain J154_02645 PF07722 Peptidase C26 J154_02646 PF00120 Glutamine synthetase, catalytic domain J154_02647 PF01266 FAD dependent oxidoreductase J154_02648 PF00990 Diguanylate cyclase, GGDEF domain J154_02648 PF00072 Response regulator receiver domain J154_02649 PF01814 Hemerythrin HHE cation binding domain J154_02650 PF00083 Sugar (and other) transporter J154_02650 PF07690 Major Facilitator Superfamily J154_02652 PF00384 Molybdopterin oxidoreductase J154_02653 PF02634 FdhD/NarQ family J154_02654 PF07690 Major Facilitator Superfamily J154_02655 PF00202 Aminotransferase class-III J154_02657 PF04286 Protein of unknown function (DUF445) J154_02658 PF00672 HAMP domain J154_02658 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J154_02658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02658 PF00072 Response regulator receiver domain J154_02658 PF00512 His Kinase A (phospho-acceptor) domain J154_02658 PF01627 Hpt domain J154_02659 PF00072 Response regulator receiver domain J154_02660 PF07690 Major Facilitator Superfamily J154_02661 PF05088 Bacterial NAD-glutamate dehydrogenase J154_02663 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_02663 PF00529 HlyD membrane-fusion protein of T1SS J154_02664 PF00873 AcrB/AcrD/AcrF family J154_02665 PF00356 Bacterial regulatory proteins, lacI family J154_02666 PF02896 PEP-utilising enzyme, TIM barrel domain J154_02666 PF00391 PEP-utilising enzyme, mobile domain J154_02666 PF05524 PEP-utilising enzyme, N-terminal J154_02666 PF00381 PTS HPr component phosphorylation site J154_02666 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J154_02667 PF00294 pfkB family carbohydrate kinase J154_02668 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J154_02676 PF02355 Protein export membrane protein J154_02676 PF07549 SecD/SecF GG Motif J154_02677 PF07549 SecD/SecF GG Motif J154_02677 PF02355 Protein export membrane protein J154_02677 PF13721 SecD export protein N-terminal TM region J154_02678 PF02699 Preprotein translocase subunit J154_02679 PF01702 Queuine tRNA-ribosyltransferase J154_02680 PF02547 Queuosine biosynthesis protein J154_02689 PF00759 Glycosyl hydrolase family 9 J154_02689 PF02927 Cellulase N-terminal ig-like domain J154_02691 PF00037 4Fe-4S binding domain J154_02694 PF01467 Cytidylyltransferase-like J154_02696 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02696 PF00183 Hsp90 protein J154_02700 PF00593 TonB dependent receptor J154_02700 PF07715 TonB-dependent Receptor Plug Domain J154_02702 PF04616 Glycosyl hydrolases family 43 J154_02703 PF07532 Bacterial Ig-like domain (group 4) J154_02704 PF07715 TonB-dependent Receptor Plug Domain J154_02704 PF00593 TonB dependent receptor J154_02706 PF00082 Subtilase family J154_02706 PF09286 Pro-kumamolisin, activation domain J154_02712 PF13520 Amino acid permease J154_02715 PF01321 Creatinase/Prolidase N-terminal domain J154_02715 PF00557 Metallopeptidase family M24 J154_02716 PF00171 Aldehyde dehydrogenase family J154_02717 PF00701 Dihydrodipicolinate synthetase family J154_02718 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_02718 PF04324 BFD-like [2Fe-2S] binding domain J154_02720 PF01266 FAD dependent oxidoreductase J154_02721 PF05544 Proline racemase J154_02723 PF02881 SRP54-type protein, helical bundle domain J154_02723 PF00448 SRP54-type protein, GTPase domain J154_02724 PF10576 Iron-sulfur binding domain of endonuclease III J154_02724 PF00633 Helix-hairpin-helix motif J154_02724 PF00730 HhH-GPD superfamily base excision DNA repair protein J154_02724 PF14815 NUDIX domain J154_02725 PF04362 Bacterial Fe(2+) trafficking J154_02726 PF13426 PAS domain J154_02726 PF00072 Response regulator receiver domain J154_02726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02732 PF08212 Lipocalin-like domain J154_02734 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_02734 PF12806 Acetyl-CoA dehydrogenase C-terminal like J154_02734 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_02734 PF02770 Acyl-CoA dehydrogenase, middle domain J154_02736 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J154_02736 PF02779 Transketolase, pyrimidine binding domain J154_02736 PF02780 Transketolase, C-terminal domain J154_02740 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J154_02741 PF00753 Metallo-beta-lactamase superfamily J154_02741 PF16123 Hydroxyacylglutathione hydrolase C-terminus J154_02742 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J154_02742 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J154_02745 PF03808 Glycosyl transferase WecB/TagA/CpsF family J154_02748 PF14667 Polysaccharide biosynthesis C-terminal domain J154_02750 PF00534 Glycosyl transferases group 1 J154_02750 PF13439 Glycosyltransferase Family 4 J154_02754 PF02397 Bacterial sugar transferase J154_02758 PF13411 MerR HTH family regulatory protein J154_02759 PF00216 Bacterial DNA-binding protein J154_02760 PF03483 B3/4 domain J154_02760 PF03484 tRNA synthetase B5 domain J154_02760 PF03147 Ferredoxin-fold anticodon binding domain J154_02760 PF01588 Putative tRNA binding domain J154_02760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J154_02761 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J154_02761 PF01409 tRNA synthetases class II core domain (F) J154_02762 PF00453 Ribosomal protein L20 J154_02763 PF01632 Ribosomal protein L35 J154_02765 PF05198 Translation initiation factor IF-3, N-terminal domain J154_02765 PF00707 Translation initiation factor IF-3, C-terminal domain J154_02766 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J154_02766 PF03129 Anticodon binding domain J154_02766 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J154_02766 PF02824 TGS domain J154_02767 PF00356 Bacterial regulatory proteins, lacI family J154_02768 PF00686 Starch binding domain J154_02768 PF00128 Alpha amylase, catalytic domain J154_02769 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J154_02771 PF10566 Glycoside hydrolase 97 J154_02771 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J154_02771 PF14508 Glycosyl-hydrolase 97 N-terminal J154_02775 PF00128 Alpha amylase, catalytic domain J154_02776 PF01527 Transposase J154_02785 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J154_02788 PF01464 Transglycosylase SLT domain J154_02789 PF00437 Type II/IV secretion system protein J154_02790 PF03743 Bacterial conjugation TrbI-like protein J154_02794 PF02534 Type IV secretory system Conjugative DNA transfer J154_02797 PF02151 UvrB/uvrC motif J154_02797 PF17757 UvrB interaction domain J154_02797 PF12344 Ultra-violet resistance protein B J154_02797 PF00271 Helicase conserved C-terminal domain J154_02797 PF04851 Type III restriction enzyme, res subunit J154_02805 PF01527 Transposase J154_02806 PF13276 HTH-like domain J154_02806 PF00665 Integrase core domain J154_02806 PF13333 Integrase core domain J154_02812 PF01555 DNA methylase J154_02822 PF00182 Chitinase class I J154_02832 PF00665 Integrase core domain J154_02832 PF13276 HTH-like domain J154_02832 PF13333 Integrase core domain J154_02833 PF01527 Transposase J154_02834 PF00114 Pilin (bacterial filament) J154_02834 PF07963 Prokaryotic N-terminal methylation motif J154_02835 PF05567 Neisseria PilC beta-propeller domain J154_02838 PF06580 Histidine kinase J154_02838 PF07694 5TMR of 5TMR-LYT J154_02838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02839 PF03641 Possible lysine decarboxylase J154_02839 PF11892 Domain of unknown function (DUF3412) J154_02839 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J154_02840 PF00593 TonB dependent receptor J154_02841 PF01914 MarC family integral membrane protein J154_02843 PF00462 Glutaredoxin J154_02844 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J154_02844 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J154_02845 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J154_02845 PF02222 ATP-grasp domain J154_02846 PF00731 AIR carboxylase J154_02848 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J154_02848 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J154_02850 PF01138 3' exoribonuclease family, domain 1 J154_02850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J154_02850 PF00013 KH domain J154_02850 PF03725 3' exoribonuclease family, domain 2 J154_02850 PF00575 S1 RNA binding domain J154_02851 PF00312 Ribosomal protein S15 J154_02852 PF09157 Pseudouridine synthase II TruB, C-terminal J154_02852 PF01509 TruB family pseudouridylate synthase (N terminal domain) J154_02852 PF16198 tRNA pseudouridylate synthase B C-terminal domain J154_02853 PF02033 Ribosome-binding factor A J154_02854 PF11987 Translation-initiation factor 2 J154_02854 PF08364 Bacterial translation initiation factor IF-2 associated region J154_02854 PF04760 Translation initiation factor IF-2, N-terminal region J154_02854 PF00009 Elongation factor Tu GTP binding domain J154_02855 PF08529 NusA N-terminal domain J154_02855 PF13184 NusA-like KH domain J154_02855 PF00575 S1 RNA binding domain J154_02856 PF17384 RimP C-terminal SH3 domain J154_02856 PF02576 RimP N-terminal domain J154_02858 PF00361 Proton-conducting membrane transporter J154_02859 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J154_02859 PF00361 Proton-conducting membrane transporter J154_02860 PF00361 Proton-conducting membrane transporter J154_02860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J154_02861 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J154_02862 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J154_02863 PF12838 4Fe-4S dicluster domain J154_02864 PF00146 NADH dehydrogenase J154_02865 PF00384 Molybdopterin oxidoreductase J154_02865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J154_02865 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J154_02866 PF10531 SLBB domain J154_02866 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J154_02866 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J154_02868 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J154_02869 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J154_02870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J154_02871 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J154_02874 PF00121 Triosephosphate isomerase J154_02875 PF00106 short chain dehydrogenase J154_02878 PF00563 EAL domain J154_02878 PF03707 Bacterial signalling protein N terminal repeat J154_02878 PF00990 Diguanylate cyclase, GGDEF domain J154_02881 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J154_02881 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J154_02881 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J154_02881 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J154_02882 PF01039 Carboxyl transferase domain J154_02882 PF17848 Acetyl-coA carboxylase zinc finger domain J154_02883 PF00290 Tryptophan synthase alpha chain J154_02885 PF00291 Pyridoxal-phosphate dependent enzyme J154_02886 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_02886 PF03466 LysR substrate binding domain J154_02887 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J154_02888 PF01416 tRNA pseudouridine synthase J154_02892 PF01118 Semialdehyde dehydrogenase, NAD binding domain J154_02892 PF02774 Semialdehyde dehydrogenase, dimerisation domain J154_02893 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J154_02893 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J154_02894 PF01264 Chorismate synthase J154_02895 PF05175 Methyltransferase small domain J154_02896 PF02630 SCO1/SenC J154_02897 PF02666 Phosphatidylserine decarboxylase J154_02899 PF05872 Bacterial protein of unknown function (DUF853) J154_02900 PF00293 NUDIX domain J154_02903 PF01272 Transcription elongation factor, GreA/GreB, C-term J154_02903 PF03449 Transcription elongation factor, N-terminal J154_02904 PF18693 TRAM domain J154_02904 PF00919 Uncharacterized protein family UPF0004 J154_02904 PF04055 Radical SAM superfamily J154_02905 PF01738 Dienelactone hydrolase family J154_02909 PF00692 dUTPase J154_02910 PF10609 NUBPL iron-transfer P-loop NTPase J154_02911 PF00593 TonB dependent receptor J154_02911 PF07715 TonB-dependent Receptor Plug Domain J154_02914 PF05649 Peptidase family M13 J154_02914 PF01431 Peptidase family M13 J154_02915 PF01431 Peptidase family M13 J154_02915 PF05649 Peptidase family M13 J154_02918 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J154_02919 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_02919 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J154_02920 PF01266 FAD dependent oxidoreductase J154_02921 PF04235 Protein of unknown function (DUF418) J154_02922 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J154_02923 PF00877 NlpC/P60 family J154_02924 PF00877 NlpC/P60 family J154_02927 PF00375 Sodium:dicarboxylate symporter family J154_02928 PF00245 Alkaline phosphatase J154_02929 PF11734 TilS substrate C-terminal domain J154_02929 PF09179 TilS substrate binding domain J154_02929 PF01171 PP-loop family J154_02930 PF02609 Exonuclease VII small subunit J154_02931 PF00348 Polyprenyl synthetase J154_02932 PF14521 Lysine-specific metallo-endopeptidase J154_02934 PF01523 Putative modulator of DNA gyrase J154_02935 PF04751 Protein of unknown function (DUF615) J154_02936 PF01523 Putative modulator of DNA gyrase J154_02938 PF13502 AsmA-like C-terminal region J154_02938 PF13116 Protein of unknown function J154_02939 PF00575 S1 RNA binding domain J154_02939 PF10150 Ribonuclease E/G family J154_02940 PF02545 Maf-like protein J154_02941 PF04402 Protein of unknown function (DUF541) J154_02944 PF02590 Predicted SPOUT methyltransferase J154_02947 PF01467 Cytidylyltransferase-like J154_02950 PF13603 Leucyl-tRNA synthetase, Domain 2 J154_02950 PF00133 tRNA synthetases class I (I, L, M and V) J154_02950 PF08264 Anticodon-binding domain of tRNA J154_02952 PF00085 Thioredoxin J154_02957 PF04070 Domain of unknown function (DUF378) J154_02958 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J154_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_02960 PF03466 LysR substrate binding domain J154_02965 PF00664 ABC transporter transmembrane region J154_02965 PF00005 ABC transporter J154_02968 PF00873 AcrB/AcrD/AcrF family J154_02971 PF02321 Outer membrane efflux protein J154_02972 PF00072 Response regulator receiver domain J154_02972 PF00486 Transcriptional regulatory protein, C terminal J154_02973 PF00512 His Kinase A (phospho-acceptor) domain J154_02973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_02973 PF00672 HAMP domain J154_02974 PF00999 Sodium/hydrogen exchanger family J154_02975 PF00144 Beta-lactamase J154_02976 PF03737 Aldolase/RraA J154_02979 PF00072 Response regulator receiver domain J154_02979 PF00990 Diguanylate cyclase, GGDEF domain J154_02980 PF00849 RNA pseudouridylate synthase J154_02980 PF01479 S4 domain J154_02981 PF08448 PAS fold J154_02981 PF00563 EAL domain J154_02981 PF00990 Diguanylate cyclase, GGDEF domain J154_02982 PF00271 Helicase conserved C-terminal domain J154_02982 PF03880 DbpA RNA binding domain J154_02982 PF00270 DEAD/DEAH box helicase J154_02992 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J154_02992 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J154_02994 PF00654 Voltage gated chloride channel J154_02995 PF00107 Zinc-binding dehydrogenase J154_02995 PF08240 Alcohol dehydrogenase GroES-like domain J154_02998 PF07715 TonB-dependent Receptor Plug Domain J154_02998 PF00593 TonB dependent receptor J154_03000 PF00082 Subtilase family J154_03000 PF01483 Proprotein convertase P-domain J154_03003 PF01483 Proprotein convertase P-domain J154_03003 PF00082 Subtilase family J154_03005 PF00248 Aldo/keto reductase family J154_03006 PF07690 Major Facilitator Superfamily J154_03007 PF03466 LysR substrate binding domain J154_03007 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03009 PF06719 AraC-type transcriptional regulator N-terminus J154_03009 PF12833 Helix-turn-helix domain J154_03011 PF00440 Bacterial regulatory proteins, tetR family J154_03011 PF16859 Tetracyclin repressor-like, C-terminal domain J154_03012 PF02321 Outer membrane efflux protein J154_03013 PF00873 AcrB/AcrD/AcrF family J154_03014 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_03014 PF00529 HlyD membrane-fusion protein of T1SS J154_03016 PF01475 Ferric uptake regulator family J154_03017 PF00749 tRNA synthetases class I (E and Q), catalytic domain J154_03022 PF06123 Inner membrane protein CreD J154_03024 PF00672 HAMP domain J154_03024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03024 PF00512 His Kinase A (phospho-acceptor) domain J154_03025 PF00072 Response regulator receiver domain J154_03025 PF00486 Transcriptional regulatory protein, C terminal J154_03026 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J154_03028 PF02559 CarD-like/TRCF domain J154_03028 PF00271 Helicase conserved C-terminal domain J154_03028 PF03461 TRCF domain J154_03028 PF17757 UvrB interaction domain J154_03028 PF00270 DEAD/DEAH box helicase J154_03035 PF09078 CheY binding J154_03035 PF01584 CheW-like domain J154_03035 PF02895 Signal transducing histidine kinase, homodimeric domain J154_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03035 PF01627 Hpt domain J154_03036 PF00672 HAMP domain J154_03036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03036 PF02203 Tar ligand binding domain homologue J154_03037 PF01584 CheW-like domain J154_03038 PF00563 EAL domain J154_03038 PF00990 Diguanylate cyclase, GGDEF domain J154_03038 PF13426 PAS domain J154_03039 PF03705 CheR methyltransferase, all-alpha domain J154_03039 PF01739 CheR methyltransferase, SAM binding domain J154_03040 PF00072 Response regulator receiver domain J154_03040 PF01339 CheB methylesterase J154_03041 PF13091 PLD-like domain J154_03042 PF01431 Peptidase family M13 J154_03042 PF05649 Peptidase family M13 J154_03044 PF00300 Histidine phosphatase superfamily (branch 1) J154_03045 PF04493 Endonuclease V J154_03047 PF05726 Pirin C-terminal cupin domain J154_03047 PF02678 Pirin J154_03050 PF02678 Pirin J154_03050 PF05726 Pirin C-terminal cupin domain J154_03051 PF02554 Carbon starvation protein CstA J154_03051 PF13722 5TM C-terminal transporter carbon starvation CstA J154_03052 PF04328 Selenoprotein, putative J154_03061 PF01527 Transposase J154_03063 PF02625 XdhC and CoxI family J154_03063 PF13478 XdhC Rossmann domain J154_03064 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J154_03064 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J154_03065 PF00941 FAD binding domain in molybdopterin dehydrogenase J154_03065 PF03450 CO dehydrogenase flavoprotein C-terminal domain J154_03066 PF00111 2Fe-2S iron-sulfur cluster binding domain J154_03066 PF01799 [2Fe-2S] binding domain J154_03066 PF10518 TAT (twin-arginine translocation) pathway signal sequence J154_03067 PF00550 Phosphopantetheine attachment site J154_03067 PF08659 KR domain J154_03067 PF00698 Acyl transferase domain J154_03067 PF08240 Alcohol dehydrogenase GroES-like domain J154_03067 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_03067 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_03067 PF08990 Erythronolide synthase docking J154_03067 PF16197 Ketoacyl-synthetase C-terminal extension J154_03067 PF14765 Polyketide synthase dehydratase J154_03067 PF09277 Erythronolide synthase, docking J154_03068 PF00563 EAL domain J154_03068 PF01590 GAF domain J154_03068 PF00990 Diguanylate cyclase, GGDEF domain J154_03068 PF00360 Phytochrome region J154_03069 PF00436 Single-strand binding protein family J154_03070 PF00348 Polyprenyl synthetase J154_03072 PF02875 Mur ligase family, glutamate ligase domain J154_03072 PF08245 Mur ligase middle domain J154_03075 PF00696 Amino acid kinase family J154_03075 PF01842 ACT domain J154_03076 PF02567 Phenazine biosynthesis-like protein J154_03077 PF02567 Phenazine biosynthesis-like protein J154_03079 PF02566 OsmC-like protein J154_03080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J154_03080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J154_03081 PF03652 Holliday junction resolvase J154_03082 PF02622 Uncharacterized ACR, COG1678 J154_03083 PF13673 Acetyltransferase (GNAT) domain J154_03083 PF13302 Acetyltransferase (GNAT) domain J154_03083 PF03352 Methyladenine glycosylase J154_03083 PF00958 GMP synthase C terminal domain J154_03083 PF00117 Glutamine amidotransferase class-I J154_03086 PF03211 Pectate lyase J154_03087 PF00437 Type II/IV secretion system protein J154_03088 PF00437 Type II/IV secretion system protein J154_03089 PF01168 Alanine racemase, N-terminal domain J154_03090 PF14748 Pyrroline-5-carboxylate reductase dimerisation J154_03090 PF03807 NADP oxidoreductase coenzyme F420-dependent J154_03092 PF01551 Peptidase family M23 J154_03096 PF01965 DJ-1/PfpI family J154_03098 PF02082 Transcriptional regulator J154_03099 PF01458 Uncharacterized protein family (UPF0051) J154_03100 PF00005 ABC transporter J154_03101 PF01458 Uncharacterized protein family (UPF0051) J154_03102 PF00266 Aminotransferase class-V J154_03104 PF00355 Rieske [2Fe-2S] domain J154_03105 PF00593 TonB dependent receptor J154_03105 PF07715 TonB-dependent Receptor Plug Domain J154_03106 PF18331 PKHD-type hydroxylase C-terminal domain J154_03106 PF13640 2OG-Fe(II) oxygenase superfamily J154_03111 PF02424 ApbE family J154_03112 PF00667 FAD binding domain J154_03112 PF00258 Flavodoxin J154_03112 PF00175 Oxidoreductase NAD-binding domain J154_03116 PF07687 Peptidase dimerisation domain J154_03116 PF01546 Peptidase family M20/M25/M40 J154_03118 PF01636 Phosphotransferase enzyme family J154_03119 PF00483 Nucleotidyl transferase J154_03120 PF00308 Bacterial dnaA protein J154_03121 PF01594 AI-2E family transporter J154_03123 PF02769 AIR synthase related protein, C-terminal domain J154_03123 PF00586 AIR synthase related protein, N-terminal domain J154_03125 PF00551 Formyl transferase J154_03129 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J154_03130 PF01722 BolA-like protein J154_03131 PF00571 CBS domain J154_03131 PF01380 SIS domain J154_03134 PF03968 OstA-like protein J154_03135 PF00005 ABC transporter J154_03136 PF04552 Sigma-54, DNA binding domain J154_03136 PF04963 Sigma-54 factor, core binding domain J154_03136 PF00309 Sigma-54 factor, Activator interacting domain (AID) J154_03137 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J154_03138 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J154_03139 PF02603 HPr Serine kinase N terminus J154_03139 PF07475 HPr Serine kinase C-terminal domain J154_03140 PF03668 P-loop ATPase protein family J154_03142 PF00381 PTS HPr component phosphorylation site J154_03143 PF05524 PEP-utilising enzyme, N-terminal J154_03143 PF00391 PEP-utilising enzyme, mobile domain J154_03143 PF02896 PEP-utilising enzyme, TIM barrel domain J154_03144 PF01769 Divalent cation transporter J154_03144 PF00571 CBS domain J154_03144 PF03448 MgtE intracellular N domain J154_03145 PF00756 Putative esterase J154_03146 PF02322 Cytochrome bd terminal oxidase subunit II J154_03147 PF01654 Cytochrome bd terminal oxidase subunit I J154_03149 PF00324 Amino acid permease J154_03150 PF00544 Pectate lyase J154_03151 PF00561 alpha/beta hydrolase fold J154_03152 PF00196 Bacterial regulatory proteins, luxR family J154_03153 PF00324 Amino acid permease J154_03158 PF12706 Beta-lactamase superfamily domain J154_03159 PF04820 Tryptophan halogenase J154_03164 PF00376 MerR family regulatory protein J154_03164 PF09278 MerR, DNA binding J154_03165 PF07690 Major Facilitator Superfamily J154_03167 PF03738 Glutathionylspermidine synthase preATP-grasp J154_03172 PF04012 PspA/IM30 family J154_03174 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J154_03174 PF01243 Pyridoxamine 5'-phosphate oxidase J154_03175 PF01202 Shikimate kinase J154_03176 PF01761 3-dehydroquinate synthase J154_03178 PF01208 Uroporphyrinogen decarboxylase (URO-D) J154_03191 PF00158 Sigma-54 interaction domain J154_03191 PF01590 GAF domain J154_03191 PF02954 Bacterial regulatory protein, Fis family J154_03192 PF07690 Major Facilitator Superfamily J154_03193 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03193 PF00072 Response regulator receiver domain J154_03193 PF00512 His Kinase A (phospho-acceptor) domain J154_03193 PF01627 Hpt domain J154_03193 PF00672 HAMP domain J154_03193 PF17149 Periplasmic sensor domain found in signal transduction proteins J154_03194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03194 PF00512 His Kinase A (phospho-acceptor) domain J154_03194 PF00072 Response regulator receiver domain J154_03194 PF01627 Hpt domain J154_03194 PF00672 HAMP domain J154_03194 PF17149 Periplasmic sensor domain found in signal transduction proteins J154_03196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03196 PF00512 His Kinase A (phospho-acceptor) domain J154_03196 PF01627 Hpt domain J154_03196 PF00072 Response regulator receiver domain J154_03197 PF04264 YceI-like domain J154_03201 PF03315 Serine dehydratase beta chain J154_03201 PF03313 Serine dehydratase alpha chain J154_03202 PF12697 Alpha/beta hydrolase family J154_03203 PF00696 Amino acid kinase family J154_03203 PF00742 Homoserine dehydrogenase J154_03203 PF03447 Homoserine dehydrogenase, NAD binding domain J154_03204 PF01053 Cys/Met metabolism PLP-dependent enzyme J154_03205 PF00561 alpha/beta hydrolase fold J154_03207 PF01551 Peptidase family M23 J154_03207 PF01476 LysM domain J154_03207 PF08525 Opacity-associated protein A N-terminal motif J154_03208 PF16658 Class II release factor RF3, C-terminal domain J154_03208 PF00009 Elongation factor Tu GTP binding domain J154_03209 PF03006 Haemolysin-III related J154_03210 PF05170 AsmA family J154_03211 PF00478 IMP dehydrogenase / GMP reductase domain J154_03211 PF00571 CBS domain J154_03212 PF00535 Glycosyl transferase family 2 J154_03213 PF00912 Transglycosylase J154_03214 PF01430 Hsp33 protein J154_03216 PF00593 TonB dependent receptor J154_03216 PF07715 TonB-dependent Receptor Plug Domain J154_03218 PF00440 Bacterial regulatory proteins, tetR family J154_03219 PF00561 alpha/beta hydrolase fold J154_03220 PF09317 Domain of unknown function (DUF1974) J154_03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J154_03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J154_03225 PF01597 Glycine cleavage H-protein J154_03226 PF08669 Glycine cleavage T-protein C-terminal barrel domain J154_03226 PF01571 Aminomethyltransferase folate-binding domain J154_03228 PF16200 C-terminal region of band_7 J154_03228 PF01145 SPFH domain / Band 7 family J154_03229 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J154_03230 PF03819 MazG nucleotide pyrophosphohydrolase domain J154_03231 PF00459 Inositol monophosphatase family J154_03232 PF00293 NUDIX domain J154_03233 PF00202 Aminotransferase class-III J154_03234 PF04452 RNA methyltransferase J154_03235 PF02685 Glucokinase J154_03238 PF01476 LysM domain J154_03238 PF00704 Glycosyl hydrolases family 18 J154_03239 PF07691 PA14 domain J154_03239 PF02838 Glycosyl hydrolase family 20, domain 2 J154_03239 PF00728 Glycosyl hydrolase family 20, catalytic domain J154_03241 PF14310 Fibronectin type III-like domain J154_03241 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_03241 PF01915 Glycosyl hydrolase family 3 C-terminal domain J154_03241 PF07691 PA14 domain J154_03243 PF01301 Glycosyl hydrolases family 35 J154_03244 PF13520 Amino acid permease J154_03246 PF11975 Family 4 glycosyl hydrolase C-terminal domain J154_03246 PF02056 Family 4 glycosyl hydrolase J154_03248 PF17678 Glycosyl hydrolase family 92 N-terminal domain J154_03248 PF07971 Glycosyl hydrolase family 92 J154_03249 PF01301 Glycosyl hydrolases family 35 J154_03255 PF03932 CutC family J154_03256 PF01112 Asparaginase J154_03257 PF13302 Acetyltransferase (GNAT) domain J154_03260 PF01584 CheW-like domain J154_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03260 PF00072 Response regulator receiver domain J154_03260 PF01627 Hpt domain J154_03261 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J154_03261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03263 PF00072 Response regulator receiver domain J154_03264 PF00072 Response regulator receiver domain J154_03265 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J154_03265 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J154_03267 PF03747 ADP-ribosylglycohydrolase J154_03268 PF00814 Glycoprotease family J154_03269 PF13307 Helicase C-terminal domain J154_03269 PF04851 Type III restriction enzyme, res subunit J154_03271 PF00912 Transglycosylase J154_03271 PF14814 Bifunctional transglycosylase second domain J154_03271 PF00905 Penicillin binding protein transpeptidase domain J154_03272 PF00535 Glycosyl transferase family 2 J154_03274 PF13291 ACT domain J154_03274 PF04607 Region found in RelA / SpoT proteins J154_03274 PF02824 TGS domain J154_03275 PF12706 Beta-lactamase superfamily domain J154_03276 PF03070 TENA/THI-4/PQQC family J154_03277 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J154_03278 PF04055 Radical SAM superfamily J154_03278 PF13186 Iron-sulfur cluster-binding domain J154_03281 PF02685 Glucokinase J154_03283 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J154_03283 PF00271 Helicase conserved C-terminal domain J154_03283 PF04408 Helicase associated domain (HA2) J154_03283 PF11898 Domain of unknown function (DUF3418) J154_03283 PF00270 DEAD/DEAH box helicase J154_03284 PF00210 Ferritin-like domain J154_03285 PF00270 DEAD/DEAH box helicase J154_03285 PF09382 RQC domain J154_03285 PF16124 RecQ zinc-binding J154_03285 PF00570 HRDC domain J154_03285 PF00271 Helicase conserved C-terminal domain J154_03292 PF00672 HAMP domain J154_03292 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03292 PF02203 Tar ligand binding domain homologue J154_03296 PF13426 PAS domain J154_03296 PF07536 HWE histidine kinase J154_03296 PF13581 Histidine kinase-like ATPase domain J154_03297 PF06508 Queuosine biosynthesis protein QueC J154_03299 PF04055 Radical SAM superfamily J154_03301 PF00691 OmpA family J154_03302 PF07676 WD40-like Beta Propeller Repeat J154_03302 PF04052 TolB amino-terminal domain J154_03304 PF02472 Biopolymer transport protein ExbD/TolR J154_03305 PF01618 MotA/TolQ/ExbB proton channel family J154_03306 PF03061 Thioesterase superfamily J154_03307 PF05496 Holliday junction DNA helicase RuvB P-loop domain J154_03307 PF05491 RuvB C-terminal winged helix domain J154_03307 PF17864 RuvB AAA lid domain J154_03309 PF02705 K+ potassium transporter J154_03310 PF07499 RuvA, C-terminal domain J154_03310 PF01330 RuvA N terminal domain J154_03311 PF02075 Crossover junction endodeoxyribonuclease RuvC J154_03312 PF01709 Transcriptional regulator J154_03315 PF01336 OB-fold nucleic acid binding domain J154_03315 PF02938 GAD domain J154_03315 PF00152 tRNA synthetases class II (D, K and N) J154_03318 PF07690 Major Facilitator Superfamily J154_03321 PF04185 Phosphoesterase family J154_03321 PF05506 Domain of unknown function (DUF756) J154_03324 PF03466 LysR substrate binding domain J154_03324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03326 PF12848 ABC transporter J154_03326 PF00005 ABC transporter J154_03327 PF00593 TonB dependent receptor J154_03327 PF07715 TonB-dependent Receptor Plug Domain J154_03329 PF07715 TonB-dependent Receptor Plug Domain J154_03329 PF00593 TonB dependent receptor J154_03330 PF07715 TonB-dependent Receptor Plug Domain J154_03330 PF00593 TonB dependent receptor J154_03331 PF00067 Cytochrome P450 J154_03332 PF00999 Sodium/hydrogen exchanger family J154_03332 PF02254 TrkA-N domain J154_03337 PF00593 TonB dependent receptor J154_03337 PF07660 Secretin and TonB N terminus short domain J154_03337 PF07715 TonB-dependent Receptor Plug Domain J154_03339 PF04183 IucA / IucC family J154_03339 PF06276 Ferric iron reductase FhuF-like transporter J154_03340 PF07690 Major Facilitator Superfamily J154_03342 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J154_03342 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J154_03345 PF02654 Cobalamin-5-phosphate synthase J154_03347 PF02277 Phosphoribosyltransferase J154_03348 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J154_03349 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J154_03349 PF07685 CobB/CobQ-like glutamine amidotransferase domain J154_03350 PF00155 Aminotransferase class I and II J154_03352 PF03186 CobD/Cbib protein J154_03352 PF17113 Regulatory signalling modulator protein AmpE J154_03353 PF12557 Cob(I)alamin adenosyltransferase N terminal J154_03353 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J154_03356 PF07715 TonB-dependent Receptor Plug Domain J154_03356 PF00593 TonB dependent receptor J154_03358 PF07724 AAA domain (Cdc48 subfamily) J154_03358 PF02861 Clp amino terminal domain, pathogenicity island component J154_03358 PF00004 ATPase family associated with various cellular activities (AAA) J154_03358 PF10431 C-terminal, D2-small domain, of ClpB protein J154_03358 PF17871 AAA lid domain J154_03359 PF00005 ABC transporter J154_03360 PF00528 Binding-protein-dependent transport system inner membrane component J154_03361 PF09084 NMT1/THI5 like J154_03362 PF00248 Aldo/keto reductase family J154_03364 PF07715 TonB-dependent Receptor Plug Domain J154_03364 PF00593 TonB dependent receptor J154_03365 PF01541 GIY-YIG catalytic domain J154_03372 PF07715 TonB-dependent Receptor Plug Domain J154_03372 PF00593 TonB dependent receptor J154_03373 PF02358 Trehalose-phosphatase J154_03374 PF00723 Glycosyl hydrolases family 15 J154_03375 PF00982 Glycosyltransferase family 20 J154_03376 PF01011 PQQ enzyme repeat J154_03377 PF00672 HAMP domain J154_03377 PF02203 Tar ligand binding domain homologue J154_03377 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03378 PF04134 Protein of unknown function, DUF393 J154_03381 PF00849 RNA pseudouridylate synthase J154_03382 PF13525 Outer membrane lipoprotein J154_03384 PF00795 Carbon-nitrogen hydrolase J154_03384 PF02540 NAD synthase J154_03386 PF01527 Transposase J154_03387 PF13333 Integrase core domain J154_03387 PF00665 Integrase core domain J154_03387 PF13276 HTH-like domain J154_03390 PF13406 Transglycosylase SLT domain J154_03391 PF13700 Domain of unknown function (DUF4158) J154_03391 PF01526 Tn3 transposase DDE domain J154_03395 PF01129 NAD:arginine ADP-ribosyltransferase J154_03400 PF02629 CoA binding domain J154_03400 PF00549 CoA-ligase J154_03401 PF08442 ATP-grasp domain J154_03401 PF00549 CoA-ligase J154_03402 PF00512 His Kinase A (phospho-acceptor) domain J154_03402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03403 PF00158 Sigma-54 interaction domain J154_03403 PF00072 Response regulator receiver domain J154_03403 PF02954 Bacterial regulatory protein, Fis family J154_03405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J154_03405 PF00437 Type II/IV secretion system protein J154_03406 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J154_03406 PF00437 Type II/IV secretion system protein J154_03407 PF00437 Type II/IV secretion system protein J154_03407 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J154_03408 PF07963 Prokaryotic N-terminal methylation motif J154_03408 PF00114 Pilin (bacterial filament) J154_03409 PF07963 Prokaryotic N-terminal methylation motif J154_03409 PF00114 Pilin (bacterial filament) J154_03410 PF00482 Type II secretion system (T2SS), protein F J154_03411 PF06750 Bacterial Peptidase A24 N-terminal domain J154_03411 PF01478 Type IV leader peptidase family J154_03412 PF01121 Dephospho-CoA kinase J154_03415 PF01527 Transposase J154_03416 PF13276 HTH-like domain J154_03416 PF00665 Integrase core domain J154_03416 PF13333 Integrase core domain J154_03417 PF00512 His Kinase A (phospho-acceptor) domain J154_03417 PF00989 PAS fold J154_03417 PF16736 Single Cache-like J154_03417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03418 PF00072 Response regulator receiver domain J154_03418 PF00486 Transcriptional regulatory protein, C terminal J154_03420 PF18030 RimK PreATP-grasp domain J154_03420 PF08443 RimK-like ATP-grasp domain J154_03421 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J154_03421 PF00128 Alpha amylase, catalytic domain J154_03434 PF04002 RadC-like JAB domain J154_03439 PF13426 PAS domain J154_03439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03439 PF00072 Response regulator receiver domain J154_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03440 PF13426 PAS domain J154_03440 PF00072 Response regulator receiver domain J154_03446 PF01527 Transposase J154_03455 PF13188 PAS domain J154_03455 PF08448 PAS fold J154_03455 PF00512 His Kinase A (phospho-acceptor) domain J154_03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03455 PF00072 Response regulator receiver domain J154_03459 PF13676 TIR domain J154_03463 PF03797 Autotransporter beta-domain J154_03463 PF00657 GDSL-like Lipase/Acylhydrolase J154_03465 PF05690 Thiazole biosynthesis protein ThiG J154_03466 PF02390 Putative methyltransferase J154_03467 PF02080 TrkA-C domain J154_03467 PF03600 Citrate transporter J154_03470 PF01557 Fumarylacetoacetate (FAA) hydrolase family J154_03471 PF01741 Large-conductance mechanosensitive channel, MscL J154_03473 PF00356 Bacterial regulatory proteins, lacI family J154_03475 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J154_03475 PF02837 Glycosyl hydrolases family 2, sugar binding domain J154_03475 PF00703 Glycosyl hydrolases family 2 J154_03476 PF10566 Glycoside hydrolase 97 J154_03476 PF14508 Glycosyl-hydrolase 97 N-terminal J154_03476 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J154_03478 PF00135 Carboxylesterase family J154_03479 PF00588 SpoU rRNA Methylase family J154_03479 PF08032 RNA 2'-O ribose methyltransferase substrate binding J154_03481 PF01433 Peptidase family M1 domain J154_03481 PF11838 ERAP1-like C-terminal domain J154_03483 PF13276 HTH-like domain J154_03483 PF00665 Integrase core domain J154_03483 PF13333 Integrase core domain J154_03484 PF01527 Transposase J154_03490 PF00873 AcrB/AcrD/AcrF family J154_03491 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_03491 PF00529 HlyD membrane-fusion protein of T1SS J154_03492 PF00009 Elongation factor Tu GTP binding domain J154_03493 PF01507 Phosphoadenosine phosphosulfate reductase family J154_03494 PF00258 Flavodoxin J154_03494 PF00175 Oxidoreductase NAD-binding domain J154_03494 PF00667 FAD binding domain J154_03495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J154_03495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J154_03496 PF01507 Phosphoadenosine phosphosulfate reductase family J154_03500 PF00072 Response regulator receiver domain J154_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03500 PF01627 Hpt domain J154_03500 PF00512 His Kinase A (phospho-acceptor) domain J154_03502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03502 PF03466 LysR substrate binding domain J154_03503 PF14824 Sirohaem biosynthesis protein central J154_03503 PF10414 Sirohaem synthase dimerisation region J154_03503 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J154_03504 PF00291 Pyridoxal-phosphate dependent enzyme J154_03506 PF01661 Macro domain J154_03507 PF00274 Fructose-bisphosphate aldolase class-I J154_03508 PF02887 Pyruvate kinase, alpha/beta domain J154_03508 PF00224 Pyruvate kinase, barrel domain J154_03510 PF00162 Phosphoglycerate kinase J154_03515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J154_03515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J154_03517 PF03922 OmpW family J154_03518 PF03922 OmpW family J154_03520 PF00753 Metallo-beta-lactamase superfamily J154_03520 PF04273 Putative phosphatase (DUF442) J154_03522 PF00528 Binding-protein-dependent transport system inner membrane component J154_03523 PF03459 TOBE domain J154_03523 PF00005 ABC transporter J154_03530 PF01476 LysM domain J154_03530 PF03734 L,D-transpeptidase catalytic domain J154_03531 PF04225 Opacity-associated protein A LysM-like domain J154_03531 PF01551 Peptidase family M23 J154_03533 PF00593 TonB dependent receptor J154_03533 PF07715 TonB-dependent Receptor Plug Domain J154_03534 PF12146 Serine aminopeptidase, S33 J154_03535 PF02780 Transketolase, C-terminal domain J154_03535 PF00456 Transketolase, thiamine diphosphate binding domain J154_03535 PF02779 Transketolase, pyrimidine binding domain J154_03536 PF00375 Sodium:dicarboxylate symporter family J154_03538 PF00092 von Willebrand factor type A domain J154_03538 PF07584 Aerotolerance regulator N-terminal J154_03542 PF17863 AAA lid domain J154_03542 PF07726 ATPase family associated with various cellular activities (AAA) J154_03544 PF11741 AMIN domain J154_03544 PF07660 Secretin and TonB N terminus short domain J154_03544 PF03958 Bacterial type II/III secretion system short domain J154_03544 PF00263 Bacterial type II and III secretion system protein J154_03549 PF00905 Penicillin binding protein transpeptidase domain J154_03549 PF00912 Transglycosylase J154_03549 PF17092 Penicillin-binding protein OB-like domain J154_03551 PF00285 Citrate synthase, C-terminal domain J154_03552 PF01197 Ribosomal protein L31 J154_03553 PF01156 Inosine-uridine preferring nucleoside hydrolase J154_03554 PF00271 Helicase conserved C-terminal domain J154_03554 PF17191 RecG wedge domain J154_03554 PF00270 DEAD/DEAH box helicase J154_03555 PF01042 Endoribonuclease L-PSP J154_03556 PF13291 ACT domain J154_03556 PF02824 TGS domain J154_03556 PF04607 Region found in RelA / SpoT proteins J154_03557 PF01192 RNA polymerase Rpb6 J154_03558 PF00625 Guanylate kinase J154_03559 PF08340 Domain of unknown function (DUF1732) J154_03559 PF03755 YicC-like family, N-terminal region J154_03560 PF03725 3' exoribonuclease family, domain 2 J154_03560 PF01138 3' exoribonuclease family, domain 1 J154_03562 PF01725 Ham1 family J154_03563 PF06969 HemN C-terminal domain J154_03563 PF04055 Radical SAM superfamily J154_03566 PF00557 Metallopeptidase family M24 J154_03568 PF05195 Aminopeptidase P, N-terminal domain J154_03568 PF00557 Metallopeptidase family M24 J154_03569 PF03695 Uncharacterised protein family (UPF0149) J154_03571 PF05164 Cell division protein ZapA J154_03573 PF01812 5-formyltetrahydrofolate cyclo-ligase family J154_03575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J154_03577 PF13369 Transglutaminase-like superfamily J154_03578 PF00301 Rubredoxin J154_03579 PF02581 Thiamine monophosphate synthase J154_03582 PF00202 Aminotransferase class-III J154_03583 PF00196 Bacterial regulatory proteins, luxR family J154_03583 PF17874 MalT-like TPR region J154_03584 PF00127 Copper binding proteins, plastocyanin/azurin family J154_03585 PF00155 Aminotransferase class I and II J154_03587 PF00034 Cytochrome c J154_03587 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J154_03588 PF01593 Flavin containing amine oxidoreductase J154_03591 PF00202 Aminotransferase class-III J154_03592 PF00520 Ion transport protein J154_03592 PF00027 Cyclic nucleotide-binding domain J154_03595 PF01569 PAP2 superfamily J154_03596 PF01062 Bestrophin, RFP-TM, chloride channel J154_03598 PF08245 Mur ligase middle domain J154_03598 PF02875 Mur ligase family, glutamate ligase domain J154_03598 PF01225 Mur ligase family, catalytic domain J154_03600 PF00365 Phosphofructokinase J154_03602 PF03030 Inorganic H+ pyrophosphatase J154_03604 PF00719 Inorganic pyrophosphatase J154_03606 PF07715 TonB-dependent Receptor Plug Domain J154_03606 PF00593 TonB dependent receptor J154_03607 PF12833 Helix-turn-helix domain J154_03608 PF00486 Transcriptional regulatory protein, C terminal J154_03608 PF18500 CadC C-terminal domain 1 J154_03609 PF01964 Radical SAM ThiC family J154_03609 PF13667 ThiC-associated domain J154_03611 PF00593 TonB dependent receptor J154_03611 PF07715 TonB-dependent Receptor Plug Domain J154_03612 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03612 PF02203 Tar ligand binding domain homologue J154_03612 PF00672 HAMP domain J154_03614 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J154_03614 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J154_03615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J154_03615 PF00205 Thiamine pyrophosphate enzyme, central domain J154_03615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J154_03617 PF00291 Pyridoxal-phosphate dependent enzyme J154_03618 PF00682 HMGL-like J154_03618 PF08502 LeuA allosteric (dimerisation) domain J154_03619 PF00180 Isocitrate/isopropylmalate dehydrogenase J154_03620 PF00694 Aconitase C-terminal domain J154_03621 PF00330 Aconitase family (aconitate hydratase) J154_03622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03623 PF17151 Periplasmic sensor domain J154_03623 PF00990 Diguanylate cyclase, GGDEF domain J154_03626 PF02321 Outer membrane efflux protein J154_03627 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J154_03628 PF03279 Bacterial lipid A biosynthesis acyltransferase J154_03633 PF00390 Malic enzyme, N-terminal domain J154_03633 PF03949 Malic enzyme, NAD binding domain J154_03633 PF01515 Phosphate acetyl/butaryl transferase J154_03634 PF00375 Sodium:dicarboxylate symporter family J154_03636 PF02743 Cache domain J154_03636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03636 PF00512 His Kinase A (phospho-acceptor) domain J154_03637 PF07690 Major Facilitator Superfamily J154_03639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03639 PF03466 LysR substrate binding domain J154_03640 PF00248 Aldo/keto reductase family J154_03644 PF00196 Bacterial regulatory proteins, luxR family J154_03644 PF00072 Response regulator receiver domain J154_03646 PF00512 His Kinase A (phospho-acceptor) domain J154_03646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03646 PF08521 Two-component sensor kinase N-terminal J154_03647 PF00072 Response regulator receiver domain J154_03647 PF00486 Transcriptional regulatory protein, C terminal J154_03649 PF03600 Citrate transporter J154_03651 PF00106 short chain dehydrogenase J154_03652 PF00356 Bacterial regulatory proteins, lacI family J154_03655 PF00128 Alpha amylase, catalytic domain J154_03658 PF03193 RsgA GTPase J154_03662 PF00593 TonB dependent receptor J154_03662 PF07715 TonB-dependent Receptor Plug Domain J154_03663 PF01522 Polysaccharide deacetylase J154_03664 PF00462 Glutaredoxin J154_03667 PF01527 Transposase J154_03672 PF02645 Uncharacterised protein, DegV family COG1307 J154_03673 PF01327 Polypeptide deformylase J154_03674 PF03960 ArsC family J154_03677 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J154_03678 PF01270 Glycosyl hydrolases family 8 J154_03679 PF03170 Bacterial cellulose synthase subunit J154_03680 PF03552 Cellulose synthase J154_03680 PF00535 Glycosyl transferase family 2 J154_03680 PF07238 PilZ domain J154_03683 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J154_03683 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J154_03690 PF07715 TonB-dependent Receptor Plug Domain J154_03690 PF00593 TonB dependent receptor J154_03692 PF00392 Bacterial regulatory proteins, gntR family J154_03692 PF07702 UTRA domain J154_03694 PF00263 Bacterial type II and III secretion system protein J154_03694 PF03958 Bacterial type II/III secretion system short domain J154_03696 PF10741 Type II secretion system (T2SS), protein M subtype b J154_03697 PF05137 Fimbrial assembly protein (PilN) J154_03698 PF03934 Type II secretion system (T2SS), protein K J154_03700 PF07963 Prokaryotic N-terminal methylation motif J154_03701 PF12019 Type II transport protein GspH J154_03702 PF08334 Type II secretion system (T2SS), protein G J154_03703 PF00482 Type II secretion system (T2SS), protein F J154_03704 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J154_03704 PF00437 Type II/IV secretion system protein J154_03705 PF04151 Bacterial pre-peptidase C-terminal domain J154_03705 PF00082 Subtilase family J154_03706 PF05662 Coiled stalk of trimeric autotransporter adhesin J154_03706 PF13018 Extended Signal Peptide of Type V secretion system J154_03706 PF03895 YadA-like membrane anchor domain J154_03706 PF05658 Head domain of trimeric autotransporter adhesin J154_03707 PF04151 Bacterial pre-peptidase C-terminal domain J154_03707 PF00082 Subtilase family J154_03708 PF05662 Coiled stalk of trimeric autotransporter adhesin J154_03708 PF13018 Extended Signal Peptide of Type V secretion system J154_03708 PF03895 YadA-like membrane anchor domain J154_03708 PF05658 Head domain of trimeric autotransporter adhesin J154_03709 PF02769 AIR synthase related protein, C-terminal domain J154_03709 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J154_03709 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J154_03710 PF13098 Thioredoxin-like domain J154_03710 PF10411 Disulfide bond isomerase protein N-terminus J154_03711 PF02899 Phage integrase, N-terminal SAM-like domain J154_03711 PF00589 Phage integrase family J154_03714 PF03739 Lipopolysaccharide export system permease LptF/LptG J154_03716 PF00883 Cytosol aminopeptidase family, catalytic domain J154_03716 PF02789 Cytosol aminopeptidase family, N-terminal domain J154_03719 PF10458 Valyl tRNA synthetase tRNA binding arm J154_03719 PF00133 tRNA synthetases class I (I, L, M and V) J154_03719 PF08264 Anticodon-binding domain of tRNA J154_03720 PF00593 TonB dependent receptor J154_03720 PF07715 TonB-dependent Receptor Plug Domain J154_03721 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J154_03721 PF01464 Transglycosylase SLT domain J154_03722 PF00544 Pectate lyase J154_03725 PF01066 CDP-alcohol phosphatidyltransferase J154_03727 PF04073 Aminoacyl-tRNA editing domain J154_03727 PF03129 Anticodon binding domain J154_03727 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J154_03728 PF00816 H-NS histone family J154_03730 PF02405 Permease MlaE J154_03731 PF00005 ABC transporter J154_03732 PF02470 MlaD protein J154_03732 PF03886 ABC-type transport auxiliary lipoprotein component J154_03736 PF05045 Rhamnan synthesis protein F J154_03736 PF14307 Glycosyltransferase WbsX J154_03737 PF01144 Coenzyme A transferase J154_03738 PF01144 Coenzyme A transferase J154_03739 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J154_03739 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J154_03739 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J154_03739 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J154_03740 PF01050 Mannose-6-phosphate isomerase J154_03740 PF00483 Nucleotidyl transferase J154_03741 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J154_03741 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J154_03741 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J154_03742 PF04321 RmlD substrate binding domain J154_03743 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J154_03744 PF00483 Nucleotidyl transferase J154_03745 PF16363 GDP-mannose 4,6 dehydratase J154_03746 PF01012 Electron transfer flavoprotein domain J154_03747 PF01012 Electron transfer flavoprotein domain J154_03747 PF00766 Electron transfer flavoprotein FAD-binding domain J154_03749 PF01040 UbiA prenyltransferase family J154_03750 PF04030 D-arabinono-1,4-lactone oxidase J154_03750 PF01565 FAD binding domain J154_03751 PF00106 short chain dehydrogenase J154_03753 PF01370 NAD dependent epimerase/dehydratase family J154_03754 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_03754 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J154_03759 PF00535 Glycosyl transferase family 2 J154_03761 PF00005 ABC transporter J154_03761 PF14524 Wzt C-terminal domain J154_03763 PF01053 Cys/Met metabolism PLP-dependent enzyme J154_03764 PF00291 Pyridoxal-phosphate dependent enzyme J154_03764 PF00571 CBS domain J154_03768 PF00437 Type II/IV secretion system protein J154_03769 PF14497 Glutathione S-transferase, C-terminal domain J154_03769 PF02798 Glutathione S-transferase, N-terminal domain J154_03771 PF00270 DEAD/DEAH box helicase J154_03771 PF00271 Helicase conserved C-terminal domain J154_03774 PF00593 TonB dependent receptor J154_03774 PF07715 TonB-dependent Receptor Plug Domain J154_03775 PF01242 6-pyruvoyl tetrahydropterin synthase J154_03778 PF13185 GAF domain J154_03780 PF00756 Putative esterase J154_03781 PF00593 TonB dependent receptor J154_03781 PF07715 TonB-dependent Receptor Plug Domain J154_03782 PF13419 Haloacid dehalogenase-like hydrolase J154_03783 PF11799 impB/mucB/samB family C-terminal domain J154_03783 PF00817 impB/mucB/samB family J154_03784 PF07977 FabA-like domain J154_03785 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_03785 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_03787 PF01432 Peptidase family M3 J154_03790 PF00394 Multicopper oxidase J154_03790 PF07731 Multicopper oxidase J154_03790 PF07732 Multicopper oxidase J154_03791 PF05275 Copper resistance protein B precursor (CopB) J154_03792 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J154_03798 PF01380 SIS domain J154_03799 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_03800 PF00005 ABC transporter J154_03800 PF02687 FtsX-like permease family J154_03800 PF12704 MacB-like periplasmic core domain J154_03801 PF00005 ABC transporter J154_03801 PF02687 FtsX-like permease family J154_03801 PF12704 MacB-like periplasmic core domain J154_03802 PF02687 FtsX-like permease family J154_03802 PF12704 MacB-like periplasmic core domain J154_03804 PF00072 Response regulator receiver domain J154_03804 PF00158 Sigma-54 interaction domain J154_03805 PF00132 Bacterial transferase hexapeptide (six repeats) J154_03805 PF12804 MobA-like NTP transferase domain J154_03805 PF14602 Hexapeptide repeat of succinyl-transferase J154_03808 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J154_03808 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J154_03809 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J154_03809 PF02874 ATP synthase alpha/beta family, beta-barrel domain J154_03810 PF00231 ATP synthase J154_03811 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J154_03811 PF00306 ATP synthase alpha/beta chain, C terminal domain J154_03811 PF02874 ATP synthase alpha/beta family, beta-barrel domain J154_03812 PF00213 ATP synthase delta (OSCP) subunit J154_03813 PF00430 ATP synthase B/B' CF(0) J154_03814 PF00137 ATP synthase subunit C J154_03815 PF00119 ATP synthase A chain J154_03819 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_03819 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J154_03821 PF00364 Biotin-requiring enzyme J154_03821 PF02817 e3 binding domain J154_03821 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J154_03827 PF03180 NLPA lipoprotein J154_03828 PF00528 Binding-protein-dependent transport system inner membrane component J154_03829 PF09383 NIL domain J154_03829 PF00005 ABC transporter J154_03830 PF00892 EamA-like transporter family J154_03831 PF04461 Protein of unknown function (DUF520) J154_03833 PF00989 PAS fold J154_03833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03833 PF00072 Response regulator receiver domain J154_03833 PF01627 Hpt domain J154_03833 PF18415 Histidine kinase receptor ArcB trans-membrane domain J154_03833 PF00512 His Kinase A (phospho-acceptor) domain J154_03837 PF13419 Haloacid dehalogenase-like hydrolase J154_03838 PF01479 S4 domain J154_03838 PF00849 RNA pseudouridylate synthase J154_03839 PF08468 Methyltransferase small domain N-terminal J154_03839 PF05175 Methyltransferase small domain J154_03841 PF07995 Glucose / Sorbosone dehydrogenase J154_03843 PF00989 PAS fold J154_03843 PF00512 His Kinase A (phospho-acceptor) domain J154_03843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03847 PF00842 Alanine racemase, C-terminal domain J154_03847 PF01168 Alanine racemase, N-terminal domain J154_03848 PF01266 FAD dependent oxidoreductase J154_03849 PF01037 Lrp/AsnC ligand binding domain J154_03851 PF01641 SelR domain J154_03853 PF01618 MotA/TolQ/ExbB proton channel family J154_03854 PF00691 OmpA family J154_03854 PF13677 Membrane MotB of proton-channel complex MotA/MotB J154_03859 PF01061 ABC-2 type transporter J154_03860 PF00005 ABC transporter J154_03861 PF00999 Sodium/hydrogen exchanger family J154_03862 PF02469 Fasciclin domain J154_03863 PF03167 Uracil DNA glycosylase superfamily J154_03865 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J154_03867 PF03466 LysR substrate binding domain J154_03867 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03868 PF03358 NADPH-dependent FMN reductase J154_03869 PF00248 Aldo/keto reductase family J154_03871 PF05649 Peptidase family M13 J154_03871 PF01431 Peptidase family M13 J154_03875 PF13520 Amino acid permease J154_03877 PF00072 Response regulator receiver domain J154_03877 PF04397 LytTr DNA-binding domain J154_03878 PF00672 HAMP domain J154_03878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_03878 PF06580 Histidine kinase J154_03878 PF02743 Cache domain J154_03881 PF05974 Domain of unknown function (DUF892) J154_03882 PF05067 Manganese containing catalase J154_03885 PF08448 PAS fold J154_03885 PF03705 CheR methyltransferase, all-alpha domain J154_03885 PF01339 CheB methylesterase J154_03885 PF01739 CheR methyltransferase, SAM binding domain J154_03888 PF00158 Sigma-54 interaction domain J154_03888 PF02954 Bacterial regulatory protein, Fis family J154_03888 PF00072 Response regulator receiver domain J154_03890 PF01654 Cytochrome bd terminal oxidase subunit I J154_03891 PF02322 Cytochrome bd terminal oxidase subunit II J154_03895 PF16363 GDP-mannose 4,6 dehydratase J154_03897 PF03275 UDP-galactopyranose mutase J154_03899 PF00005 ABC transporter J154_03899 PF00664 ABC transporter transmembrane region J154_03902 PF08240 Alcohol dehydrogenase GroES-like domain J154_03902 PF13823 Alcohol dehydrogenase GroES-associated J154_03902 PF00107 Zinc-binding dehydrogenase J154_03911 PF00593 TonB dependent receptor J154_03911 PF07715 TonB-dependent Receptor Plug Domain J154_03914 PF00005 ABC transporter J154_03916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03916 PF03466 LysR substrate binding domain J154_03917 PF01042 Endoribonuclease L-PSP J154_03919 PF01527 Transposase J154_03923 PF02203 Tar ligand binding domain homologue J154_03923 PF00672 HAMP domain J154_03923 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J154_03926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03926 PF03466 LysR substrate binding domain J154_03927 PF02525 Flavodoxin-like fold J154_03936 PF00557 Metallopeptidase family M24 J154_03941 PF00140 Sigma-70 factor, region 1.2 J154_03941 PF04545 Sigma-70, region 4 J154_03941 PF04539 Sigma-70 region 3 J154_03941 PF04542 Sigma-70 region 2 J154_03941 PF04546 Sigma-70, non-essential region J154_03941 PF03979 Sigma-70 factor, region 1.1 J154_03942 PF02580 D-Tyr-tRNA(Tyr) deacylase J154_03943 PF03279 Bacterial lipid A biosynthesis acyltransferase J154_03945 PF00925 GTP cyclohydrolase II J154_03949 PF00535 Glycosyl transferase family 2 J154_03952 PF01189 16S rRNA methyltransferase RsmB/F J154_03952 PF01029 NusB family J154_03953 PF00551 Formyl transferase J154_03953 PF02911 Formyl transferase, C-terminal domain J154_03954 PF01327 Polypeptide deformylase J154_03955 PF01476 LysM domain J154_03956 PF17782 DprA winged helix domain J154_03956 PF02481 DNA recombination-mediator protein A J154_03957 PF04361 Protein of unknown function (DUF494) J154_03958 PF07963 Prokaryotic N-terminal methylation motif J154_03958 PF00114 Pilin (bacterial filament) J154_03960 PF01131 DNA topoisomerase J154_03960 PF01751 Toprim domain J154_03960 PF13368 Topoisomerase C-terminal repeat J154_03961 PF01300 Telomere recombination J154_03966 PF01343 Peptidase family S49 J154_03967 PF01554 MatE J154_03971 PF17764 3′ DNA-binding domain (3′BD) J154_03971 PF18074 Primosomal protein N C-terminal domain J154_03971 PF00271 Helicase conserved C-terminal domain J154_03971 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J154_03971 PF00270 DEAD/DEAH box helicase J154_03972 PF00043 Glutathione S-transferase, C-terminal domain J154_03972 PF13417 Glutathione S-transferase, N-terminal domain J154_03975 PF07992 Pyridine nucleotide-disulphide oxidoreductase J154_03976 PF03458 UPF0126 domain J154_03977 PF04542 Sigma-70 region 2 J154_03977 PF04545 Sigma-70, region 4 J154_03978 PF03167 Uracil DNA glycosylase superfamily J154_03979 PF00072 Response regulator receiver domain J154_03979 PF01339 CheB methylesterase J154_03980 PF18075 FtsX extracellular domain J154_03981 PF00005 ABC transporter J154_03982 PF00271 Helicase conserved C-terminal domain J154_03982 PF00270 DEAD/DEAH box helicase J154_03982 PF12300 ATP-dependent RNA helicase RhlB J154_03983 PF00085 Thioredoxin J154_03984 PF07497 Rho termination factor, RNA-binding domain J154_03984 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J154_03984 PF07498 Rho termination factor, N-terminal domain J154_03985 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J154_03986 PF03466 LysR substrate binding domain J154_03986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_03988 PF03971 Monomeric isocitrate dehydrogenase J154_03991 PF09704 CRISPR-associated protein (Cas_Cas5) J154_03996 PF01867 CRISPR associated protein Cas1 J154_03997 PF09827 CRISPR associated protein Cas2 J154_03999 PF04972 BON domain J154_03999 PF01476 LysM domain J154_04000 PF14489 QueF-like protein J154_04000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J154_04001 PF07687 Peptidase dimerisation domain J154_04001 PF01546 Peptidase family M20/M25/M40 J154_04002 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_04003 PF00873 AcrB/AcrD/AcrF family J154_04004 PF00873 AcrB/AcrD/AcrF family J154_04005 PF07063 Domain of unknown function (DUF1338) J154_04013 PF01427 D-ala-D-ala dipeptidase J154_04014 PF01510 N-acetylmuramoyl-L-alanine amidase J154_04016 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J154_04016 PF13378 Enolase C-terminal domain-like J154_04018 PF13520 Amino acid permease J154_04021 PF05360 yiaA/B two helix domain J154_04022 PF07995 Glucose / Sorbosone dehydrogenase J154_04023 PF14310 Fibronectin type III-like domain J154_04023 PF01915 Glycosyl hydrolase family 3 C-terminal domain J154_04023 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_04024 PF02152 Dihydroneopterin aldolase J154_04025 PF00814 Glycoprotease family J154_04026 PF01165 Ribosomal protein S21 J154_04027 PF09424 Yqey-like protein J154_04028 PF03631 Virulence factor BrkB J154_04029 PF08275 DNA primase catalytic core, N-terminal domain J154_04029 PF01807 CHC2 zinc finger J154_04029 PF08278 DNA primase DnaG DnaB-binding J154_04029 PF10410 DnaB-helicase binding domain of primase J154_04030 PF13593 SBF-like CPA transporter family (DUF4137) J154_04032 PF01040 UbiA prenyltransferase family J154_04037 PF00510 Cytochrome c oxidase subunit III J154_04038 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J154_04040 PF00115 Cytochrome C and Quinol oxidase polypeptide I J154_04041 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J154_04041 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J154_04043 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J154_04043 PF01619 Proline dehydrogenase J154_04043 PF00171 Aldehyde dehydrogenase family J154_04043 PF14850 DNA-binding domain of Proline dehydrogenase J154_04051 PF00579 tRNA synthetases class I (W and Y) J154_04052 PF01551 Peptidase family M23 J154_04052 PF04225 Opacity-associated protein A LysM-like domain J154_04053 PF03702 Anhydro-N-acetylmuramic acid kinase J154_04055 PF07690 Major Facilitator Superfamily J154_04056 PF03372 Endonuclease/Exonuclease/phosphatase family J154_04057 PF00156 Phosphoribosyl transferase domain J154_04059 PF13614 AAA domain J154_04060 PF17762 HTH domain found in ParB protein J154_04060 PF02195 ParB-like nuclease domain J154_04062 PF01370 NAD dependent epimerase/dehydratase family J154_04063 PF00535 Glycosyl transferase family 2 J154_04066 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J154_04066 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J154_04066 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J154_04066 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J154_04067 PF00692 dUTPase J154_04068 PF04127 DNA / pantothenate metabolism flavoprotein J154_04068 PF02441 Flavoprotein J154_04069 PF04002 RadC-like JAB domain J154_04070 PF05746 DALR anticodon binding domain J154_04070 PF03485 Arginyl tRNA synthetase N terminal domain J154_04070 PF00750 tRNA synthetases class I (R) J154_04073 PF00106 short chain dehydrogenase J154_04074 PF01757 Acyltransferase family J154_04075 PF03033 Glycosyltransferase family 28 N-terminal domain J154_04076 PF00550 Phosphopantetheine attachment site J154_04076 PF00975 Thioesterase domain J154_04076 PF00668 Condensation domain J154_04076 PF13193 AMP-binding enzyme C-terminal domain J154_04076 PF00501 AMP-binding enzyme J154_04077 PF17944 Arginine decarboxylase C-terminal helical extension J154_04077 PF17810 Arginine decarboxylase helical bundle domain J154_04077 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J154_04078 PF17284 Spermidine synthase tetramerisation domain J154_04083 PF00543 Nitrogen regulatory protein P-II J154_04084 PF04380 Membrane fusogenic activity J154_04085 PF13335 Magnesium chelatase, subunit ChlI C-terminal J154_04085 PF01078 Magnesium chelatase, subunit ChlI J154_04088 PF00563 EAL domain J154_04088 PF12792 CSS motif domain associated with EAL J154_04089 PF00487 Fatty acid desaturase J154_04090 PF00970 Oxidoreductase FAD-binding domain J154_04090 PF00175 Oxidoreductase NAD-binding domain J154_04090 PF00111 2Fe-2S iron-sulfur cluster binding domain J154_04091 PF00440 Bacterial regulatory proteins, tetR family J154_04097 PF01139 tRNA-splicing ligase RtcB J154_04105 PF08338 Domain of unknown function (DUF1731) J154_04105 PF01370 NAD dependent epimerase/dehydratase family J154_04106 PF00072 Response regulator receiver domain J154_04106 PF00486 Transcriptional regulatory protein, C terminal J154_04107 PF08521 Two-component sensor kinase N-terminal J154_04107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_04107 PF00512 His Kinase A (phospho-acceptor) domain J154_04111 PF00595 PDZ domain J154_04115 PF01594 AI-2E family transporter J154_04116 PF13419 Haloacid dehalogenase-like hydrolase J154_04117 PF02789 Cytosol aminopeptidase family, N-terminal domain J154_04117 PF00883 Cytosol aminopeptidase family, catalytic domain J154_04119 PF04542 Sigma-70 region 2 J154_04119 PF08281 Sigma-70, region 4 J154_04120 PF00199 Catalase J154_04123 PF00072 Response regulator receiver domain J154_04123 PF00196 Bacterial regulatory proteins, luxR family J154_04124 PF07730 Histidine kinase J154_04125 PF13533 Biotin-lipoyl like J154_04126 PF00005 ABC transporter J154_04130 PF00892 EamA-like transporter family J154_04131 PF00892 EamA-like transporter family J154_04132 PF00892 EamA-like transporter family J154_04135 PF00753 Metallo-beta-lactamase superfamily J154_04136 PF00579 tRNA synthetases class I (W and Y) J154_04137 PF05532 CsbD-like J154_04140 PF00491 Arginase family J154_04145 PF02223 Thymidylate kinase J154_04148 PF03309 Type III pantothenate kinase J154_04149 PF08279 HTH domain J154_04149 PF03099 Biotin/lipoate A/B protein ligase family J154_04149 PF02237 Biotin protein ligase C terminal domain J154_04151 PF06167 Glucose-regulated metallo-peptidase M90 J154_04154 PF00672 HAMP domain J154_04154 PF00512 His Kinase A (phospho-acceptor) domain J154_04154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_04155 PF00072 Response regulator receiver domain J154_04155 PF00486 Transcriptional regulatory protein, C terminal J154_04157 PF01207 Dihydrouridine synthase (Dus) J154_04160 PF06628 Catalase-related immune-responsive J154_04160 PF00199 Catalase J154_04161 PF06733 DEAD_2 J154_04161 PF13307 Helicase C-terminal domain J154_04164 PF08501 Shikimate dehydrogenase substrate binding domain J154_04164 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J154_04164 PF01488 Shikimate / quinate 5-dehydrogenase J154_04166 PF00667 FAD binding domain J154_04166 PF00175 Oxidoreductase NAD-binding domain J154_04166 PF00258 Flavodoxin J154_04168 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_04168 PF03466 LysR substrate binding domain J154_04170 PF00490 Delta-aminolevulinic acid dehydratase J154_04174 PF00326 Prolyl oligopeptidase family J154_04174 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J154_04175 PF02798 Glutathione S-transferase, N-terminal domain J154_04175 PF00043 Glutathione S-transferase, C-terminal domain J154_04179 PF04820 Tryptophan halogenase J154_04182 PF00005 ABC transporter J154_04184 PF01381 Helix-turn-helix J154_04186 PF01229 Glycosyl hydrolases family 39 J154_04187 PF02583 Metal-sensitive transcriptional repressor J154_04188 PF01545 Cation efflux family J154_04188 PF16916 Dimerisation domain of Zinc Transporter J154_04190 PF07715 TonB-dependent Receptor Plug Domain J154_04190 PF00593 TonB dependent receptor J154_04192 PF01965 DJ-1/PfpI family J154_04192 PF12833 Helix-turn-helix domain J154_04193 PF00175 Oxidoreductase NAD-binding domain J154_04193 PF00970 Oxidoreductase FAD-binding domain J154_04193 PF00111 2Fe-2S iron-sulfur cluster binding domain J154_04194 PF00005 ABC transporter J154_04195 PF01061 ABC-2 type transporter J154_04197 PF02558 Ketopantoate reductase PanE/ApbA J154_04197 PF08546 Ketopantoate reductase PanE/ApbA C terminal J154_04203 PF00268 Ribonucleotide reductase, small chain J154_04204 PF03477 ATP cone domain J154_04204 PF02867 Ribonucleotide reductase, barrel domain J154_04204 PF00317 Ribonucleotide reductase, all-alpha domain J154_04206 PF13607 Succinyl-CoA ligase like flavodoxin domain J154_04206 PF00583 Acetyltransferase (GNAT) family J154_04206 PF13380 CoA binding domain J154_04207 PF00571 CBS domain J154_04207 PF01769 Divalent cation transporter J154_04207 PF03448 MgtE intracellular N domain J154_04208 PF00194 Eukaryotic-type carbonic anhydrase J154_04209 PF02254 TrkA-N domain J154_04209 PF00999 Sodium/hydrogen exchanger family J154_04210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J154_04210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J154_04211 PF00723 Glycosyl hydrolases family 15 J154_04214 PF05166 YcgL domain J154_04215 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_04215 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_04217 PF00535 Glycosyl transferase family 2 J154_04228 PF07977 FabA-like domain J154_04229 PF01553 Acyltransferase J154_04231 PF00550 Phosphopantetheine attachment site J154_04232 PF04820 Tryptophan halogenase J154_04236 PF00326 Prolyl oligopeptidase family J154_04236 PF07676 WD40-like Beta Propeller Repeat J154_04239 PF01218 Coproporphyrinogen III oxidase J154_04240 PF01612 3'-5' exonuclease J154_04240 PF00476 DNA polymerase family A J154_04240 PF01367 5'-3' exonuclease, C-terminal SAM fold J154_04240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J154_04246 PF00069 Protein kinase domain J154_04246 PF03793 PASTA domain J154_04254 PF04717 Type VI secretion system, phage-baseplate injector J154_04257 PF03793 PASTA domain J154_04257 PF00069 Protein kinase domain J154_04259 PF04542 Sigma-70 region 2 J154_04259 PF08281 Sigma-70, region 4 J154_04262 PF00328 Histidine phosphatase superfamily (branch 2) J154_04269 PF07724 AAA domain (Cdc48 subfamily) J154_04269 PF00004 ATPase family associated with various cellular activities (AAA) J154_04269 PF10431 C-terminal, D2-small domain, of ClpB protein J154_04269 PF17871 AAA lid domain J154_04274 PF05638 Type VI secretion system effector, Hcp J154_04279 PF14602 Hexapeptide repeat of succinyl-transferase J154_04279 PF12464 Maltose acetyltransferase J154_04280 PF00580 UvrD/REP helicase N-terminal domain J154_04280 PF13361 UvrD-like helicase C-terminal domain J154_04282 PF13091 PLD-like domain J154_04282 PF13396 Phospholipase_D-nuclease N-terminal J154_04283 PF03466 LysR substrate binding domain J154_04283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_04284 PF03737 Aldolase/RraA J154_04285 PF04303 PrpF protein J154_04286 PF04909 Amidohydrolase J154_04287 PF00471 Ribosomal protein L33 J154_04288 PF00830 Ribosomal L28 family J154_04289 PF00873 AcrB/AcrD/AcrF family J154_04290 PF13533 Biotin-lipoyl like J154_04294 PF02527 rRNA small subunit methyltransferase G J154_04295 PF09423 PhoD-like phosphatase J154_04295 PF16655 PhoD-like phosphatase, N-terminal domain J154_04297 PF16655 PhoD-like phosphatase, N-terminal domain J154_04297 PF09423 PhoD-like phosphatase J154_04298 PF01648 4'-phosphopantetheinyl transferase superfamily J154_04299 PF04226 Transglycosylase associated protein J154_04301 PF03372 Endonuclease/Exonuclease/phosphatase family J154_04303 PF00480 ROK family J154_04305 PF09312 SurA N-terminal domain J154_04307 PF00474 Sodium:solute symporter family J154_04308 PF04341 Protein of unknown function, DUF485 J154_04310 PF13193 AMP-binding enzyme C-terminal domain J154_04310 PF16177 Acetyl-coenzyme A synthetase N-terminus J154_04310 PF00501 AMP-binding enzyme J154_04311 PF00196 Bacterial regulatory proteins, luxR family J154_04311 PF00072 Response regulator receiver domain J154_04316 PF04616 Glycosyl hydrolases family 43 J154_04316 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J154_04317 PF00248 Aldo/keto reductase family J154_04320 PF01557 Fumarylacetoacetate (FAA) hydrolase family J154_04321 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J154_04321 PF13378 Enolase C-terminal domain-like J154_04323 PF05336 L-rhamnose mutarotase J154_04324 PF07690 Major Facilitator Superfamily J154_04325 PF01614 Bacterial transcriptional regulator J154_04325 PF09339 IclR helix-turn-helix domain J154_04326 PF02659 Putative manganese efflux pump J154_04327 PF00512 His Kinase A (phospho-acceptor) domain J154_04327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_04329 PF06165 Glycosyltransferase family 36 J154_04329 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J154_04332 PF13570 PQQ-like domain J154_04332 PF13360 PQQ-like domain J154_04332 PF01011 PQQ enzyme repeat J154_04336 PF04357 TamB, inner membrane protein subunit of TAM complex J154_04337 PF01103 Surface antigen J154_04337 PF17243 POTRA domain TamA domain 1 J154_04340 PF01527 Transposase J154_04341 PF13276 HTH-like domain J154_04341 PF00665 Integrase core domain J154_04341 PF13333 Integrase core domain J154_04342 PF00664 ABC transporter transmembrane region J154_04342 PF00005 ABC transporter J154_04342 PF03412 Peptidase C39 family J154_04344 PF05746 DALR anticodon binding domain J154_04344 PF02092 Glycyl-tRNA synthetase beta subunit J154_04345 PF02091 Glycyl-tRNA synthetase alpha subunit J154_04346 PF00437 Type II/IV secretion system protein J154_04346 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J154_04348 PF00117 Glutamine amidotransferase class-I J154_04348 PF00958 GMP synthase C terminal domain J154_04350 PF00902 Sec-independent protein translocase protein (TatC) J154_04351 PF02416 mttA/Hcf106 family J154_04352 PF02416 mttA/Hcf106 family J154_04354 PF00762 Ferrochelatase J154_04355 PF12697 Alpha/beta hydrolase family J154_04357 PF04381 Putative exonuclease, RdgC J154_04358 PF01171 PP-loop family J154_04360 PF00356 Bacterial regulatory proteins, lacI family J154_04361 PF03648 Glycosyl hydrolase family 67 N-terminus J154_04361 PF07488 Glycosyl hydrolase family 67 middle domain J154_04361 PF07477 Glycosyl hydrolase family 67 C-terminus J154_04363 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J154_04363 PF13378 Enolase C-terminal domain-like J154_04364 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J154_04364 PF04616 Glycosyl hydrolases family 43 J154_04365 PF07691 PA14 domain J154_04365 PF14310 Fibronectin type III-like domain J154_04365 PF00933 Glycosyl hydrolase family 3 N terminal domain J154_04365 PF01915 Glycosyl hydrolase family 3 C-terminal domain J154_04366 PF08125 Mannitol dehydrogenase C-terminal domain J154_04366 PF01232 Mannitol dehydrogenase Rossmann domain J154_04371 PF00171 Aldehyde dehydrogenase family J154_04374 PF00202 Aminotransferase class-III J154_04375 PF00202 Aminotransferase class-III J154_04377 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J154_04377 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J154_04380 PF08450 SMP-30/Gluconolactonase/LRE-like region J154_04381 PF00331 Glycosyl hydrolase family 10 J154_04382 PF02837 Glycosyl hydrolases family 2, sugar binding domain J154_04382 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J154_04382 PF00703 Glycosyl hydrolases family 2 J154_04382 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J154_04382 PF16355 Domain of unknown function (DUF4982) J154_04383 PF02614 Glucuronate isomerase J154_04384 PF00331 Glycosyl hydrolase family 10 J154_04384 PF00553 Cellulose binding domain J154_04384 PF03422 Carbohydrate binding module (family 6) J154_04386 PF03422 Carbohydrate binding module (family 6) J154_04386 PF00553 Cellulose binding domain J154_04386 PF00331 Glycosyl hydrolase family 10 J154_04390 PF04616 Glycosyl hydrolases family 43 J154_04400 PF08240 Alcohol dehydrogenase GroES-like domain J154_04400 PF14765 Polyketide synthase dehydratase J154_04400 PF00698 Acyl transferase domain J154_04400 PF00107 Zinc-binding dehydrogenase J154_04400 PF00550 Phosphopantetheine attachment site J154_04400 PF16197 Ketoacyl-synthetase C-terminal extension J154_04400 PF00109 Beta-ketoacyl synthase, N-terminal domain J154_04400 PF02801 Beta-ketoacyl synthase, C-terminal domain J154_04400 PF08659 KR domain J154_04401 PF01553 Acyltransferase J154_04403 PF00356 Bacterial regulatory proteins, lacI family J154_04406 PF04820 Tryptophan halogenase J154_04407 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J154_04408 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J154_04410 PF04337 Protein of unknown function, DUF480 J154_04413 PF13361 UvrD-like helicase C-terminal domain J154_04413 PF00580 UvrD/REP helicase N-terminal domain J154_04414 PF00265 Thymidine kinase J154_04415 PF08446 PAS fold J154_04415 PF00512 His Kinase A (phospho-acceptor) domain J154_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J154_04415 PF01590 GAF domain J154_04415 PF00360 Phytochrome region J154_04416 PF04349 Periplasmic glucan biosynthesis protein, MdoG J154_04418 PF06827 Zinc finger found in FPG and IleRS J154_04418 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J154_04418 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J154_04425 PF03594 Benzoate membrane transport protein J154_04426 PF01590 GAF domain J154_04426 PF08446 PAS fold J154_04426 PF00360 Phytochrome region J154_04426 PF13426 PAS domain J154_04427 PF01126 Heme oxygenase J154_04428 PF07690 Major Facilitator Superfamily J154_04429 PF01263 Aldose 1-epimerase J154_04431 PF02810 SEC-C motif J154_04432 PF01925 Sulfite exporter TauE/SafE J154_04436 PF01227 GTP cyclohydrolase I J154_04438 PF07869 Protein of unknown function (DUF1656) J154_04439 PF00529 HlyD membrane-fusion protein of T1SS J154_04439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J154_04440 PF02321 Outer membrane efflux protein J154_04441 PF04632 Fusaric acid resistance protein family J154_04442 PF00083 Sugar (and other) transporter J154_04443 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J154_04444 PF13396 Phospholipase_D-nuclease N-terminal J154_04444 PF13091 PLD-like domain J154_04449 PF01850 PIN domain J154_04454 PF00849 RNA pseudouridylate synthase J154_04456 PF01527 Transposase J154_04457 PF13333 Integrase core domain J154_04457 PF13276 HTH-like domain J154_04457 PF00665 Integrase core domain J154_04460 PF00289 Biotin carboxylase, N-terminal domain J154_04460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J154_04460 PF02785 Biotin carboxylase C-terminal domain J154_04461 PF01425 Amidase J154_04468 PF13538 UvrD-like helicase C-terminal domain J154_04471 PF13361 UvrD-like helicase C-terminal domain J154_04471 PF12705 PD-(D/E)XK nuclease superfamily J154_04471 PF00580 UvrD/REP helicase N-terminal domain J154_04472 PF17946 RecC C-terminal domain J154_04474 PF00005 ABC transporter J154_04475 PF02405 Permease MlaE J154_04476 PF02470 MlaD protein J154_04477 PF05494 MlaC protein J154_04479 PF04333 MlaA lipoprotein J154_04481 PF00255 Glutathione peroxidase J154_04483 PF02646 RmuC family J154_04484 PF08240 Alcohol dehydrogenase GroES-like domain J154_04484 PF00107 Zinc-binding dehydrogenase J154_04485 PF03466 LysR substrate binding domain J154_04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J154_04487 PF00043 Glutathione S-transferase, C-terminal domain J154_04487 PF13417 Glutathione S-transferase, N-terminal domain J154_04489 PF13520 Amino acid permease J154_04490 PF17678 Glycosyl hydrolase family 92 N-terminal domain J154_04490 PF07971 Glycosyl hydrolase family 92 J154_04491 PF10947 Protein of unknown function (DUF2628) J154_04492 PF00990 Diguanylate cyclase, GGDEF domain J154_04493 PF05651 Putative sugar diacid recognition J154_04493 PF13556 PucR C-terminal helix-turn-helix domain J154_04493 PF17853 GGDEF-like domain J154_04494 PF02595 Glycerate kinase family J154_04495 PF07690 Major Facilitator Superfamily J154_04498 PF17785 PUA-like domain J154_04498 PF10672 S-adenosylmethionine-dependent methyltransferase J154_04500 PF03741 Integral membrane protein TerC family J154_04501 PF01694 Rhomboid family J154_04502 PF03009 Glycerophosphoryl diester phosphodiesterase family J154_04504 PF01569 PAP2 superfamily J154_04505 PF01926 50S ribosome-binding GTPase J154_04505 PF12631 MnmE helical domain J154_04505 PF10396 GTP-binding protein TrmE N-terminus J154_04506 PF01522 Polysaccharide deacetylase J154_04507 PF02096 60Kd inner membrane protein J154_04507 PF14849 YidC periplasmic domain J154_04508 PF00825 Ribonuclease P J154_04509 PF00468 Ribosomal protein L34