J154_00006 SM00857 Resolvase, N terminal domain J154_00007 SM00966 SpoVT / AbrB like domain J154_00029 SM00857 Resolvase, N terminal domain J154_00035 SM00670 Large family of predicted nucleotide-binding domains J154_00037 SM00857 Resolvase, N terminal domain J154_00097 SM00470 ParB-like nuclease domain J154_00104 SM00857 Resolvase, N terminal domain J154_00109 SM00670 Large family of predicted nucleotide-binding domains J154_00111 SM00857 Resolvase, N terminal domain J154_00112 SM00382 ATPases associated with a variety of cellular activities J154_00112 SM00760 Bacterial dnaA protein helix-turn-helix domain J154_00113 SM00480 DNA polymerase III beta subunit J154_00116 SM00387 Histidine kinase-like ATPases J154_00116 SM00433 TopoisomeraseII J154_00119 SM00028 Tetratricopeptide repeats J154_00126 SM00155 Phospholipase D. Active site motifs. J154_00129 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_00135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_00135 SM00245 tail specific protease J154_00143 SM00829 Enoylreductase J154_00168 SM00382 ATPases associated with a variety of cellular activities J154_00192 SM00487 DEAD-like helicases superfamily J154_00192 SM00490 helicase superfamily c-terminal domain J154_00196 SM00822 J154_00196 J154_00197 SM00822 J154_00197 J154_00246 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J154_00250 SM00421 helix_turn_helix, Lux Regulon J154_00250 SM00448 cheY-homologous receiver domain J154_00254 SM00862 Transcriptional regulatory protein, C terminal J154_00270 SM00642 Alpha-amylase domain J154_00271 SM00642 Alpha-amylase domain J154_00272 SM00642 Alpha-amylase domain J154_00282 SM00354 helix_turn _helix lactose operon repressor J154_00290 SM00344 helix_turn_helix ASNC type J154_00294 SM00382 ATPases associated with a variety of cellular activities J154_00297 SM00382 ATPases associated with a variety of cellular activities J154_00303 SM00530 Helix-turn-helix XRE-family like proteins J154_00308 SM00855 Phosphoglycerate mutase family J154_00309 SM00867 YceI-like domain J154_00310 SM00155 Phospholipase D. Active site motifs. J154_00312 SM00563 Phosphate acyltransferases J154_00315 SM00028 Tetratricopeptide repeats J154_00317 SM00829 Enoylreductase J154_00320 SM01230 J154_00320 J154_00321 SM00938 Nitrogen regulatory protein P-II J154_00323 SM00387 Histidine kinase-like ATPases J154_00323 SM00388 His Kinase A (phosphoacceptor) domain J154_00324 SM00382 ATPases associated with a variety of cellular activities J154_00324 SM00448 cheY-homologous receiver domain J154_00336 SM00450 Rhodanese Homology Domain J154_00341 SM00387 Histidine kinase-like ATPases J154_00341 SM00388 His Kinase A (phosphoacceptor) domain J154_00342 SM00382 ATPases associated with a variety of cellular activities J154_00342 SM00448 cheY-homologous receiver domain J154_00364 SM00563 Phosphate acyltransferases J154_00370 SM00342 helix_turn_helix, arabinose operon control protein J154_00375 SM00100 Cyclic nucleotide-monophosphate binding domain J154_00375 SM00267 diguanylate cyclase J154_00380 SM00878 Biotin carboxylase C-terminal domain J154_00385 SM00953 J154_00385 J154_00393 SM00833 Cobalamin synthesis protein cobW C-terminal domain J154_00398 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_00404 SM00829 Enoylreductase J154_00410 SM00487 DEAD-like helicases superfamily J154_00410 SM00490 helicase superfamily c-terminal domain J154_00410 SM00847 Helicase associated domain (HA2) Add an annotation J154_00435 SM00422 helix_turn_helix, mercury resistance J154_00442 SM00448 cheY-homologous receiver domain J154_00442 SM00862 Transcriptional regulatory protein, C terminal J154_00443 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_00443 SM00387 Histidine kinase-like ATPases J154_00443 SM00388 His Kinase A (phosphoacceptor) domain J154_00469 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_00470 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_00474 SM00342 helix_turn_helix, arabinose operon control protein J154_00481 SM00420 helix_turn_helix, Deoxyribose operon repressor J154_00481 SM01134 J154_00481 J154_00484 SM00882 Coenzyme A transferase J154_00485 SM00882 Coenzyme A transferase J154_00489 SM00998 Adenylosuccinate lyase C-terminus J154_00493 SM00346 helix_turn_helix isocitrate lyase regulation J154_00494 SM00090 RIO-like kinase J154_00497 SM01228 J154_00497 J154_00508 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_00508 SM00876 Biotin and Thiamin Synthesis associated domain J154_00513 SM00369 Leucine-rich repeats, typical (most populated) subfamily J154_00533 SM00382 ATPases associated with a variety of cellular activities J154_00545 SM00267 diguanylate cyclase J154_00547 SM00642 Alpha-amylase domain J154_00548 SM00642 Alpha-amylase domain J154_00550 SM00642 Alpha-amylase domain J154_00552 SM00642 Alpha-amylase domain J154_00561 SM00822 J154_00561 J154_00563 SM00487 DEAD-like helicases superfamily J154_00563 SM00490 helicase superfamily c-terminal domain J154_00566 SM00326 Src homology 3 domains J154_00567 SM00861 Transketolase, pyrimidine binding domain J154_00569 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J154_00573 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_00592 SM00271 DnaJ molecular chaperone homology domain J154_00596 SM00046 Diacylglycerol kinase catalytic domain (presumed) J154_00600 SM00903 Flavin reductase like domain J154_00604 SM00100 Cyclic nucleotide-monophosphate binding domain J154_00604 SM00419 helix_turn_helix, cAMP Regulatory protein J154_00614 SM00387 Histidine kinase-like ATPases J154_00614 SM00388 His Kinase A (phosphoacceptor) domain J154_00614 SM00448 cheY-homologous receiver domain J154_00615 SM00052 Putative diguanylate phosphodiesterase J154_00615 SM00267 diguanylate cyclase J154_00615 SM00448 cheY-homologous receiver domain J154_00626 SM00563 Phosphate acyltransferases J154_00630 SM01209 J154_00630 J154_00630 SM01210 J154_00630 J154_00632 SM00798 AICARFT/IMPCHase bienzyme J154_00632 SM00851 MGS-like domain J154_00635 SM00195 Dual specificity phosphatase, catalytic domain J154_00639 SM00563 Phosphate acyltransferases J154_00644 SM00530 Helix-turn-helix XRE-family like proteins J154_00649 SM00878 Biotin carboxylase C-terminal domain J154_00655 SM00342 helix_turn_helix, arabinose operon control protein J154_00657 SM00234 in StAR and phosphatidylcholine transfer protein J154_00661 SM00883 Chaperonin 10 Kd subunit J154_00672 SM00944 Pro-kumamolisin, activation domain J154_00675 SM00867 YceI-like domain J154_00686 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J154_00688 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_00688 SM00895 J154_00688 J154_00692 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_00692 SM00331 Sigma factor PP2C-like phosphatases J154_00700 SM00342 helix_turn_helix, arabinose operon control protein J154_00712 SM00267 diguanylate cyclase J154_00717 SM00062 Bacterial periplasmic substrate-binding proteins J154_00726 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J154_00726 SM01232 J154_00726 J154_00728 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_00731 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_00731 SM00091 PAS domain J154_00731 SM00267 diguanylate cyclase J154_00732 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_00732 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_00732 SM01049 J154_00732 J154_00733 SM00637 J154_00733 J154_00735 SM00267 diguanylate cyclase J154_00741 SM00448 cheY-homologous receiver domain J154_00741 SM00850 LytTr DNA-binding domain J154_00757 SM00382 ATPases associated with a variety of cellular activities J154_00757 SM01086 C-terminal, D2-small domain, of ClpB protein J154_00763 SM00267 diguanylate cyclase J154_00764 SM01263 J154_00764 J154_00767 SM00564 beta-propeller repeat J154_00768 SM00062 Bacterial periplasmic substrate-binding proteins J154_00768 SM00248 ankyrin repeats J154_00771 SM00829 Enoylreductase J154_00773 SM00382 ATPases associated with a variety of cellular activities J154_00775 SM00268 Actin J154_00780 SM00710 Parallel beta-helix repeats J154_00783 SM00936 Penicillin-binding protein 5, C-terminal domain J154_00787 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_00788 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_00788 SM00245 tail specific protease J154_00799 SM01350 J154_00799 J154_00801 SM00749 bacterial OsmY and nodulation domain J154_00802 SM00387 Histidine kinase-like ATPases J154_00802 SM00388 His Kinase A (phosphoacceptor) domain J154_00803 SM00448 cheY-homologous receiver domain J154_00804 SM00387 Histidine kinase-like ATPases J154_00804 SM00388 His Kinase A (phosphoacceptor) domain J154_00804 SM00448 cheY-homologous receiver domain J154_00810 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J154_00815 SM00382 ATPases associated with a variety of cellular activities J154_00831 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_00831 SM00866 J154_00831 J154_00833 SM00354 helix_turn _helix lactose operon repressor J154_00847 SM00849 Metallo-beta-lactamase superfamily J154_00848 SM00342 helix_turn_helix, arabinose operon control protein J154_00850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_00850 SM00387 Histidine kinase-like ATPases J154_00850 SM00388 His Kinase A (phosphoacceptor) domain J154_00851 SM00448 cheY-homologous receiver domain J154_00851 SM00862 Transcriptional regulatory protein, C terminal J154_00855 SM00829 Enoylreductase J154_00858 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_00862 SM00382 ATPases associated with a variety of cellular activities J154_00875 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J154_00881 SM00387 Histidine kinase-like ATPases J154_00881 SM00388 His Kinase A (phosphoacceptor) domain J154_00882 SM00448 cheY-homologous receiver domain J154_00882 SM00862 Transcriptional regulatory protein, C terminal J154_00906 SM00842 Cell division protein FtsA J154_00907 SM00864 Tubulin/FtsZ family, GTPase domain J154_00907 SM00865 Tubulin/FtsZ family, C-terminal domain J154_00911 SM00957 SecA DEAD-like domain J154_00911 SM00958 SecA preprotein cross-linking domain J154_00917 SM00829 Enoylreductase J154_00918 SM00944 Pro-kumamolisin, activation domain J154_00921 SM00642 Alpha-amylase domain J154_00928 SM00996 S-adenosyl-L-homocysteine hydrolase J154_00928 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J154_00953 SM00382 ATPases associated with a variety of cellular activities J154_00957 SM00382 ATPases associated with a variety of cellular activities J154_00959 SM00448 cheY-homologous receiver domain J154_00959 SM00862 Transcriptional regulatory protein, C terminal J154_00960 SM00387 Histidine kinase-like ATPases J154_00960 SM00388 His Kinase A (phosphoacceptor) domain J154_00970 SM00382 ATPases associated with a variety of cellular activities J154_00972 SM00382 ATPases associated with a variety of cellular activities J154_00985 SM00382 ATPases associated with a variety of cellular activities J154_00988 SM00650 Ribosomal RNA adenine dimethylases J154_00993 SM00108 Bulb-type mannose-specific lectin J154_01002 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_01002 SM00895 J154_01002 J154_01009 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_01021 SM00448 cheY-homologous receiver domain J154_01022 SM00387 Histidine kinase-like ATPases J154_01022 SM00388 His Kinase A (phosphoacceptor) domain J154_01022 SM00448 cheY-homologous receiver domain J154_01023 SM00421 helix_turn_helix, Lux Regulon J154_01036 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J154_01036 SM00475 5'-3' exonuclease J154_01042 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J154_01042 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J154_01066 SM00852 Probable molybdopterin binding domain J154_01067 SM00028 Tetratricopeptide repeats J154_01068 SM00937 J154_01068 J154_01070 SM00028 Tetratricopeptide repeats J154_01074 SM01400 J154_01074 J154_01084 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J154_01084 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J154_01085 SM00649 Ribosomal protein L11/L12 J154_01091 SM00663 RNA polymerase I subunit A N-terminus J154_01094 SM00838 Elongation factor G C-terminus J154_01094 SM00889 Elongation factor G, domain IV J154_01096 SM01403 J154_01096 J154_01100 SM01382 J154_01100 J154_01100 SM01383 J154_01100 J154_01103 SM00322 K homology RNA-binding domain J154_01107 SM01374 J154_01107 J154_01108 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J154_01120 SM00363 S4 RNA-binding domain J154_01120 SM01390 J154_01120 J154_01121 SM00662 RNA polymerases D J154_01129 SM00838 Elongation factor G C-terminus J154_01135 SM00829 Enoylreductase J154_01144 SM00382 ATPases associated with a variety of cellular activities J154_01146 SM00829 Enoylreductase J154_01151 SM00855 Phosphoglycerate mutase family J154_01162 SM00014 Acid phosphatase homologues J154_01166 SM00091 PAS domain J154_01166 SM00387 Histidine kinase-like ATPases J154_01166 SM00388 His Kinase A (phosphoacceptor) domain J154_01167 SM00448 cheY-homologous receiver domain J154_01167 SM00862 Transcriptional regulatory protein, C terminal J154_01171 SM01329 J154_01171 J154_01205 SM00387 Histidine kinase-like ATPases J154_01206 SM00091 PAS domain J154_01210 SM00382 ATPases associated with a variety of cellular activities J154_01210 SM00994 ClpX C4-type zinc finger J154_01210 SM01086 C-terminal, D2-small domain, of ClpB protein J154_01211 SM00382 ATPases associated with a variety of cellular activities J154_01211 SM00464 Found in ATP-dependent protease La (LON) J154_01212 SM00411 bacterial (prokaryotic) histone like domain J154_01218 SM00257 Lysin motif J154_01219 SM00849 Metallo-beta-lactamase superfamily J154_01222 SM00479 J154_01222 J154_01223 SM00331 Sigma factor PP2C-like phosphatases J154_01223 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J154_01228 SM00849 Metallo-beta-lactamase superfamily J154_01229 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_01242 SM00382 ATPases associated with a variety of cellular activities J154_01244 SM00493 J154_01244 J154_01247 SM00460 Transglutaminase/protease-like homologues J154_01249 SM00382 ATPases associated with a variety of cellular activities J154_01258 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J154_01259 SM00822 J154_01259 J154_01261 SM00825 Beta-ketoacyl synthase J154_01268 SM00382 ATPases associated with a variety of cellular activities J154_01277 SM01359 J154_01277 J154_01277 SM01360 J154_01277 J154_01284 SM00271 DnaJ molecular chaperone homology domain J154_01286 SM00448 cheY-homologous receiver domain J154_01288 SM00244 prohibitin homologues J154_01289 SM00244 prohibitin homologues J154_01290 SM01321 J154_01290 J154_01291 SM00788 Adenylosuccinate synthetase J154_01294 SM00822 J154_01294 J154_01304 SM00220 Serine/Threonine protein kinases, catalytic domain J154_01308 SM00855 Phosphoglycerate mutase family J154_01319 SM00052 Putative diguanylate phosphodiesterase J154_01320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_01322 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J154_01323 SM01092 CO dehydrogenase flavoprotein C-terminal domain J154_01326 SM00974 J154_01326 J154_01330 SM00966 SpoVT / AbrB like domain J154_01334 SM00481 DNA polymerase alpha chain like domain J154_01336 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_01343 SM00091 PAS domain J154_01343 SM00342 helix_turn_helix, arabinose operon control protein J154_01348 SM01060 J154_01348 J154_01360 SM00448 cheY-homologous receiver domain J154_01360 SM00862 Transcriptional regulatory protein, C terminal J154_01361 SM00387 Histidine kinase-like ATPases J154_01361 SM00388 His Kinase A (phosphoacceptor) domain J154_01368 SM00421 helix_turn_helix, Lux Regulon J154_01368 SM00448 cheY-homologous receiver domain J154_01371 SM00478 endonuclease III J154_01375 SM00244 prohibitin homologues J154_01393 SM00904 Riboflavin kinase J154_01402 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_01403 SM00382 ATPases associated with a variety of cellular activities J154_01405 SM00862 Transcriptional regulatory protein, C terminal J154_01406 SM00342 helix_turn_helix, arabinose operon control protein J154_01413 SM00387 Histidine kinase-like ATPases J154_01413 SM00388 His Kinase A (phosphoacceptor) domain J154_01414 SM00387 Histidine kinase-like ATPases J154_01414 SM00388 His Kinase A (phosphoacceptor) domain J154_01414 SM00448 cheY-homologous receiver domain J154_01419 SM00387 Histidine kinase-like ATPases J154_01419 SM00388 His Kinase A (phosphoacceptor) domain J154_01419 SM00448 cheY-homologous receiver domain J154_01421 SM00138 Methyltransferase, chemotaxis proteins J154_01422 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_01422 SM00387 Histidine kinase-like ATPases J154_01422 SM00388 His Kinase A (phosphoacceptor) domain J154_01422 SM00448 cheY-homologous receiver domain J154_01423 SM00091 PAS domain J154_01423 SM00387 Histidine kinase-like ATPases J154_01423 SM00388 His Kinase A (phosphoacceptor) domain J154_01424 SM00448 cheY-homologous receiver domain J154_01426 SM00813 Alpha-L-arabinofuranosidase C-terminus J154_01429 SM00382 ATPases associated with a variety of cellular activities J154_01429 SM00962 SRP54-type protein, GTPase domain J154_01429 SM00963 SRP54-type protein, helical bundle domain J154_01443 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J154_01443 SM00534 ATPase domain of DNA mismatch repair MUTS family J154_01448 SM00812 Alpha-L-fucosidase J154_01453 SM00530 Helix-turn-helix XRE-family like proteins J154_01463 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_01464 SM00838 Elongation factor G C-terminus J154_01467 SM00358 Double-stranded RNA binding motif J154_01467 SM00535 Ribonuclease III family J154_01470 SM00448 cheY-homologous receiver domain J154_01472 SM01118 J154_01472 J154_01479 SM00357 Cold shock protein domain J154_01482 SM00487 DEAD-like helicases superfamily J154_01482 SM00490 helicase superfamily c-terminal domain J154_01488 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_01488 SM00267 diguanylate cyclase J154_01492 SM00869 Autotransporter beta-domain J154_01493 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J154_01494 SM00671 Sel1-like repeats. J154_01494 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J154_01533 SM00382 ATPases associated with a variety of cellular activities J154_01550 SM00481 DNA polymerase alpha chain like domain J154_01558 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_01564 SM00267 diguanylate cyclase J154_01569 SM00972 Spore Coat Protein U domain J154_01572 SM00972 Spore Coat Protein U domain J154_01574 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_01578 SM01172 J154_01578 J154_01579 SM00710 Parallel beta-helix repeats J154_01579 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J154_01586 SM00434 DNA Topoisomerase IV J154_01587 SM00342 helix_turn_helix, arabinose operon control protein J154_01588 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_01593 SM01217 J154_01593 J154_01594 SM00631 J154_01594 J154_01600 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_01604 SM00382 ATPases associated with a variety of cellular activities J154_01607 SM00947 Carbonic anhydrase J154_01610 SM00357 Cold shock protein domain J154_01633 SM00267 diguanylate cyclase J154_01635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_01635 SM00267 diguanylate cyclase J154_01671 SM00271 DnaJ molecular chaperone homology domain J154_01680 SM00382 ATPases associated with a variety of cellular activities J154_01685 SM00861 Transketolase, pyrimidine binding domain J154_01687 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J154_01691 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_01691 SM01091 Transporter associated domain J154_01697 SM00382 ATPases associated with a variety of cellular activities J154_01698 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_01702 SM00984 UDP binding domain J154_01706 SM00354 helix_turn _helix lactose operon repressor J154_01710 SM01018 B12 binding domain J154_01712 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J154_01716 SM00316 Ribosomal protein S1-like RNA-binding domain J154_01716 SM00357 Cold shock protein domain J154_01716 SM00955 J154_01716 J154_01718 SM00967 RNA 2'-O ribose methyltransferase substrate binding J154_01719 SM00267 diguanylate cyclase J154_01720 SM00479 J154_01720 J154_01723 SM00382 ATPases associated with a variety of cellular activities J154_01730 SM00947 Carbonic anhydrase J154_01732 SM00478 endonuclease III J154_01737 SM00450 Rhodanese Homology Domain J154_01739 SM00644 J154_01739 J154_01743 SM00382 ATPases associated with a variety of cellular activities J154_01744 SM00981 J154_01744 J154_01749 SM00479 J154_01749 J154_01754 SM00947 Carbonic anhydrase J154_01763 SM00421 helix_turn_helix, Lux Regulon J154_01763 SM00448 cheY-homologous receiver domain J154_01775 SM00968 SMC proteins Flexible Hinge Domain J154_01776 SM00771 ZipA, C-terminal domain (FtsZ-binding) J154_01779 SM00292 breast cancer carboxy-terminal domain J154_01779 SM00532 Ligase N family J154_01783 SM00434 DNA Topoisomerase IV J154_01784 SM00564 beta-propeller repeat J154_01791 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_01791 SM00866 J154_01791 J154_01796 SM00240 Forkhead associated domain J154_01800 SM00830 Chorismate mutase type II J154_01809 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_01809 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_01811 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_01812 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_01812 SM00091 PAS domain J154_01812 SM00387 Histidine kinase-like ATPases J154_01812 SM00388 His Kinase A (phosphoacceptor) domain J154_01812 SM00448 cheY-homologous receiver domain J154_01813 SM00448 cheY-homologous receiver domain J154_01814 SM00382 ATPases associated with a variety of cellular activities J154_01815 SM00091 PAS domain J154_01815 SM00387 Histidine kinase-like ATPases J154_01815 SM00388 His Kinase A (phosphoacceptor) domain J154_01815 SM00448 cheY-homologous receiver domain J154_01846 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_01848 SM00382 ATPases associated with a variety of cellular activities J154_01853 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_01853 SM01091 Transporter associated domain J154_01858 SM00387 Histidine kinase-like ATPases J154_01858 SM00433 TopoisomeraseII J154_01863 SM01192 J154_01863 J154_01863 SM01193 J154_01863 J154_01868 SM00463 Small MutS-related domain J154_01872 SM00257 Lysin motif J154_01875 SM01103 J154_01875 J154_01877 SM00382 ATPases associated with a variety of cellular activities J154_01885 SM00382 ATPases associated with a variety of cellular activities J154_01887 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J154_01890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_01890 SM00091 PAS domain J154_01890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_01900 SM00670 Large family of predicted nucleotide-binding domains J154_01904 SM01130 J154_01904 J154_01909 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J154_01918 SM00758 J154_01918 J154_01925 SM00646 J154_01925 J154_01941 SM00052 Putative diguanylate phosphodiesterase J154_01941 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_01941 SM00267 diguanylate cyclase J154_01943 SM00448 cheY-homologous receiver domain J154_01944 SM00387 Histidine kinase-like ATPases J154_01946 SM00014 Acid phosphatase homologues J154_01961 SM00912 haemagglutination activity domain J154_01971 SM00100 Cyclic nucleotide-monophosphate binding domain J154_01971 SM00419 helix_turn_helix, cAMP Regulatory protein J154_01986 SM01007 Class II Aldolase and Adducin N-terminal domain J154_01995 SM00841 Elongation factor P, C-terminal J154_01995 SM01185 J154_01995 J154_01996 SM00822 J154_01996 J154_02000 SM00899 J154_02000 J154_02007 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J154_02009 SM00851 MGS-like domain J154_02009 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J154_02020 SM00850 LytTr DNA-binding domain J154_02021 SM00937 J154_02021 J154_02023 SM00448 cheY-homologous receiver domain J154_02023 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_02024 SM00073 Histidine Phosphotransfer domain J154_02024 SM00387 Histidine kinase-like ATPases J154_02024 SM00388 His Kinase A (phosphoacceptor) domain J154_02024 SM00448 cheY-homologous receiver domain J154_02029 SM00966 SpoVT / AbrB like domain J154_02033 SM00052 Putative diguanylate phosphodiesterase J154_02033 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_02033 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02033 SM00091 PAS domain J154_02033 SM00267 diguanylate cyclase J154_02034 SM00448 cheY-homologous receiver domain J154_02036 SM00138 Methyltransferase, chemotaxis proteins J154_02037 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02037 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02038 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02039 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02041 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02042 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02042 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02046 SM01049 J154_02046 J154_02048 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02048 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02049 SM00073 Histidine Phosphotransfer domain J154_02049 SM00260 Two component signalling adaptor domain J154_02049 SM00387 Histidine kinase-like ATPases J154_02049 SM01231 J154_02049 J154_02050 SM00448 cheY-homologous receiver domain J154_02052 SM00260 Two component signalling adaptor domain J154_02058 SM00220 Serine/Threonine protein kinases, catalytic domain J154_02072 SM00530 Helix-turn-helix XRE-family like proteins J154_02077 SM00073 Histidine Phosphotransfer domain J154_02077 SM00260 Two component signalling adaptor domain J154_02077 SM00387 Histidine kinase-like ATPases J154_02077 SM01231 J154_02077 J154_02079 SM00448 cheY-homologous receiver domain J154_02082 SM00382 ATPases associated with a variety of cellular activities J154_02082 SM00962 SRP54-type protein, GTPase domain J154_02085 SM00052 Putative diguanylate phosphodiesterase J154_02085 SM00267 diguanylate cyclase J154_02086 SM00267 diguanylate cyclase J154_02087 SM00267 diguanylate cyclase J154_02098 SM00382 ATPases associated with a variety of cellular activities J154_02109 SM00822 J154_02109 J154_02114 SM00382 ATPases associated with a variety of cellular activities J154_02115 SM00448 cheY-homologous receiver domain J154_02117 SM00421 helix_turn_helix, Lux Regulon J154_02117 SM00448 cheY-homologous receiver domain J154_02125 SM00047 Lysozyme subfamily 2 J154_02134 SM00260 Two component signalling adaptor domain J154_02134 SM00448 cheY-homologous receiver domain J154_02135 SM00858 J154_02135 J154_02138 SM00387 Histidine kinase-like ATPases J154_02139 SM00052 Putative diguanylate phosphodiesterase J154_02139 SM00267 diguanylate cyclase J154_02139 SM00448 cheY-homologous receiver domain J154_02140 SM00091 PAS domain J154_02140 SM00387 Histidine kinase-like ATPases J154_02141 SM00052 Putative diguanylate phosphodiesterase J154_02141 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02141 SM00091 PAS domain J154_02141 SM00267 diguanylate cyclase J154_02143 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02148 SM00382 ATPases associated with a variety of cellular activities J154_02148 SM01086 C-terminal, D2-small domain, of ClpB protein J154_02149 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02153 SM00382 ATPases associated with a variety of cellular activities J154_02153 SM00843 J154_02153 J154_02157 SM00382 ATPases associated with a variety of cellular activities J154_02164 SM00562 J154_02164 J154_02166 SM00028 Tetratricopeptide repeats J154_02169 SM00564 beta-propeller repeat J154_02170 SM00382 ATPases associated with a variety of cellular activities J154_02171 SM00852 Probable molybdopterin binding domain J154_02172 SM00450 Rhodanese Homology Domain J154_02181 SM00852 Probable molybdopterin binding domain J154_02186 SM00529 Helix-turn-helix diphteria tox regulatory element J154_02188 SM00479 J154_02188 J154_02202 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02202 SM00732 Likely ribonuclease with RNase H fold. J154_02203 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_02203 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02203 SM00091 PAS domain J154_02203 SM00387 Histidine kinase-like ATPases J154_02203 SM00388 His Kinase A (phosphoacceptor) domain J154_02203 SM00448 cheY-homologous receiver domain J154_02204 SM00448 cheY-homologous receiver domain J154_02221 SM00382 ATPases associated with a variety of cellular activities J154_02232 SM00382 ATPases associated with a variety of cellular activities J154_02234 SM00849 Metallo-beta-lactamase superfamily J154_02237 SM00382 ATPases associated with a variety of cellular activities J154_02240 SM00226 Low molecular weight phosphatase family J154_02242 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J154_02242 SM00465 GIY-YIG type nucleases (URI domain) J154_02248 SM00823 Phosphopantetheine attachment site J154_02255 SM00984 UDP binding domain J154_02259 SM00450 Rhodanese Homology Domain J154_02260 SM00421 helix_turn_helix, Lux Regulon J154_02260 SM00448 cheY-homologous receiver domain J154_02261 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02262 SM00363 S4 RNA-binding domain J154_02270 SM01034 Sensors of blue-light using FAD J154_02291 SM00448 cheY-homologous receiver domain J154_02291 SM00850 LytTr DNA-binding domain J154_02294 SM00869 Autotransporter beta-domain J154_02298 SM00387 Histidine kinase-like ATPases J154_02298 SM00388 His Kinase A (phosphoacceptor) domain J154_02299 SM00421 helix_turn_helix, Lux Regulon J154_02299 SM00448 cheY-homologous receiver domain J154_02300 SM00869 Autotransporter beta-domain J154_02301 SM00052 Putative diguanylate phosphodiesterase J154_02306 SM01012 J154_02306 J154_02315 SM00342 helix_turn_helix, arabinose operon control protein J154_02316 SM00387 Histidine kinase-like ATPases J154_02317 SM00421 helix_turn_helix, Lux Regulon J154_02317 SM00448 cheY-homologous receiver domain J154_02318 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02325 SM00530 Helix-turn-helix XRE-family like proteins J154_02339 SM00966 SpoVT / AbrB like domain J154_02344 SM00965 Secretin and TonB N terminus short domain J154_02349 SM00736 Dystroglycan-type cadherin-like domains. J154_02355 SM00382 ATPases associated with a variety of cellular activities J154_02365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J154_02365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J154_02365 SM00493 J154_02365 J154_02390 SM00342 helix_turn_helix, arabinose operon control protein J154_02399 SM00487 DEAD-like helicases superfamily J154_02450 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_02450 SM01240 J154_02450 J154_02455 SM00822 J154_02455 J154_02457 SM00028 Tetratricopeptide repeats J154_02459 SM00411 bacterial (prokaryotic) histone like domain J154_02460 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02476 SM00354 helix_turn _helix lactose operon repressor J154_02481 SM00363 S4 RNA-binding domain J154_02486 SM00382 ATPases associated with a variety of cellular activities J154_02496 SM00357 Cold shock protein domain J154_02497 SM00382 ATPases associated with a variety of cellular activities J154_02498 SM00382 ATPases associated with a variety of cellular activities J154_02504 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J154_02506 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J154_02509 SM00859 Semialdehyde dehydrogenase, NAD binding domain J154_02517 SM00840 J154_02517 J154_02521 SM01234 J154_02521 J154_02529 SM00849 Metallo-beta-lactamase superfamily J154_02534 SM00656 J154_02534 J154_02542 SM00841 Elongation factor P, C-terminal J154_02542 SM01185 J154_02542 J154_02544 SM00052 Putative diguanylate phosphodiesterase J154_02544 SM00267 diguanylate cyclase J154_02544 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02551 SM00382 ATPases associated with a variety of cellular activities J154_02552 SM00487 DEAD-like helicases superfamily J154_02552 SM00490 helicase superfamily c-terminal domain J154_02557 SM00357 Cold shock protein domain J154_02558 SM01322 J154_02558 J154_02560 SM00052 Putative diguanylate phosphodiesterase J154_02560 SM00267 diguanylate cyclase J154_02563 SM00822 J154_02563 J154_02567 SM00853 MutL C terminal dimerisation domain J154_02567 SM01340 J154_02567 J154_02568 SM00646 J154_02568 J154_02575 SM00474 3'-5' exonuclease J154_02579 SM00528 Domain in histone-like proteins of HNS family J154_02597 SM00857 Resolvase, N terminal domain J154_02612 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_02612 SM00267 diguanylate cyclase J154_02613 SM00260 Two component signalling adaptor domain J154_02614 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_02614 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02616 SM00487 DEAD-like helicases superfamily J154_02616 SM00490 helicase superfamily c-terminal domain J154_02627 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_02632 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_02632 SM01091 Transporter associated domain J154_02638 SM00382 ATPases associated with a variety of cellular activities J154_02644 SM01230 J154_02644 J154_02646 SM01230 J154_02646 J154_02648 SM00267 diguanylate cyclase J154_02648 SM00448 cheY-homologous receiver domain J154_02658 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02658 SM00091 PAS domain J154_02658 SM00387 Histidine kinase-like ATPases J154_02658 SM00388 His Kinase A (phosphoacceptor) domain J154_02658 SM00448 cheY-homologous receiver domain J154_02658 SM01079 J154_02658 J154_02659 SM00448 cheY-homologous receiver domain J154_02659 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_02665 SM00354 helix_turn _helix lactose operon repressor J154_02678 SM01323 J154_02678 J154_02681 SM00344 helix_turn_helix ASNC type J154_02696 SM00387 Histidine kinase-like ATPases J154_02706 SM00944 Pro-kumamolisin, activation domain J154_02717 SM01130 J154_02717 J154_02722 SM00342 helix_turn_helix, arabinose operon control protein J154_02723 SM00382 ATPases associated with a variety of cellular activities J154_02723 SM00962 SRP54-type protein, GTPase domain J154_02723 SM00963 SRP54-type protein, helical bundle domain J154_02724 SM00478 endonuclease III J154_02726 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02726 SM00091 PAS domain J154_02726 SM00387 Histidine kinase-like ATPases J154_02726 SM00388 His Kinase A (phosphoacceptor) domain J154_02726 SM00448 cheY-homologous receiver domain J154_02729 SM00465 GIY-YIG type nucleases (URI domain) J154_02735 SM00507 HNH nucleases J154_02736 SM00861 Transketolase, pyrimidine binding domain J154_02741 SM00849 Metallo-beta-lactamase superfamily J154_02758 SM00422 helix_turn_helix, mercury resistance J154_02759 SM00411 bacterial (prokaryotic) histone like domain J154_02760 SM00873 B3/4 domain J154_02760 SM00874 tRNA synthetase B5 domain J154_02760 SM00896 Ferredoxin-fold anticodon binding domain J154_02766 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J154_02767 SM00354 helix_turn _helix lactose operon repressor J154_02768 SM00642 Alpha-amylase domain J154_02775 SM00642 Alpha-amylase domain J154_02785 SM00382 ATPases associated with a variety of cellular activities J154_02797 SM00487 DEAD-like helicases superfamily J154_02797 SM00490 helicase superfamily c-terminal domain J154_02846 SM01001 AIR carboxylase J154_02850 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02850 SM00322 K homology RNA-binding domain J154_02851 SM01387 J154_02851 J154_02855 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02855 SM00322 K homology RNA-binding domain J154_02865 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J154_02866 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J154_02875 SM00822 J154_02875 J154_02878 SM00052 Putative diguanylate phosphodiesterase J154_02878 SM00267 diguanylate cyclase J154_02878 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02892 SM00859 Semialdehyde dehydrogenase, NAD binding domain J154_02898 SM00257 Lysin motif J154_02904 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_02917 SM01160 J154_02917 J154_02928 SM00098 Alkaline phosphatase homologues J154_02929 SM00977 TilS substrate C-terminal domain J154_02932 SM01351 J154_02932 J154_02939 SM00316 Ribosomal protein S1-like RNA-binding domain J154_02965 SM00382 ATPases associated with a variety of cellular activities J154_02972 SM00448 cheY-homologous receiver domain J154_02972 SM00862 Transcriptional regulatory protein, C terminal J154_02973 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_02973 SM00387 Histidine kinase-like ATPases J154_02973 SM00388 His Kinase A (phosphoacceptor) domain J154_02979 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_02979 SM00267 diguanylate cyclase J154_02980 SM00363 S4 RNA-binding domain J154_02981 SM00052 Putative diguanylate phosphodiesterase J154_02981 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_02981 SM00091 PAS domain J154_02981 SM00267 diguanylate cyclase J154_02982 SM00487 DEAD-like helicases superfamily J154_02982 SM00490 helicase superfamily c-terminal domain J154_02991 SM00342 helix_turn_helix, arabinose operon control protein J154_02991 SM00478 endonuclease III J154_02991 SM01009 AlkA N-terminal domain J154_02995 SM00829 Enoylreductase J154_03009 SM00342 helix_turn_helix, arabinose operon control protein J154_03023 SM00645 Papain family cysteine protease J154_03024 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_03024 SM00387 Histidine kinase-like ATPases J154_03024 SM00388 His Kinase A (phosphoacceptor) domain J154_03025 SM00448 cheY-homologous receiver domain J154_03025 SM00862 Transcriptional regulatory protein, C terminal J154_03028 SM00487 DEAD-like helicases superfamily J154_03028 SM00490 helicase superfamily c-terminal domain J154_03028 SM00982 J154_03028 J154_03028 SM01058 CarD-like/TRCF domain J154_03035 SM00073 Histidine Phosphotransfer domain J154_03035 SM00260 Two component signalling adaptor domain J154_03035 SM00387 Histidine kinase-like ATPases J154_03035 SM01231 J154_03035 J154_03036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_03037 SM00260 Two component signalling adaptor domain J154_03038 SM00052 Putative diguanylate phosphodiesterase J154_03038 SM00448 cheY-homologous receiver domain J154_03039 SM00138 Methyltransferase, chemotaxis proteins J154_03040 SM00448 cheY-homologous receiver domain J154_03041 SM00155 Phospholipase D. Active site motifs. J154_03044 SM00855 Phosphoglycerate mutase family J154_03054 SM00248 ankyrin repeats J154_03064 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J154_03065 SM01092 CO dehydrogenase flavoprotein C-terminal domain J154_03067 SM00829 Enoylreductase J154_03068 SM00267 diguanylate cyclase J154_03081 SM00732 Likely ribonuclease with RNase H fold. J154_03088 SM00382 ATPases associated with a variety of cellular activities J154_03091 SM00411 bacterial (prokaryotic) histone like domain J154_03097 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J154_03100 SM00382 ATPases associated with a variety of cellular activities J154_03106 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J154_03107 SM00671 Sel1-like repeats. J154_03113 SM00054 EF-hand, calcium binding motif J154_03131 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_03135 SM00382 ATPases associated with a variety of cellular activities J154_03144 SM00924 MgtE intracellular N domain J154_03150 SM00656 J154_03150 J154_03152 SM00421 helix_turn_helix, Lux Regulon J154_03158 SM00849 Metallo-beta-lactamase superfamily J154_03160 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J154_03164 SM00422 helix_turn_helix, mercury resistance J154_03191 SM00342 helix_turn_helix, arabinose operon control protein J154_03193 SM00387 Histidine kinase-like ATPases J154_03193 SM00388 His Kinase A (phosphoacceptor) domain J154_03193 SM00448 cheY-homologous receiver domain J154_03194 SM00387 Histidine kinase-like ATPases J154_03194 SM00388 His Kinase A (phosphoacceptor) domain J154_03194 SM00448 cheY-homologous receiver domain J154_03196 SM00387 Histidine kinase-like ATPases J154_03196 SM00388 His Kinase A (phosphoacceptor) domain J154_03196 SM00448 cheY-homologous receiver domain J154_03197 SM00867 YceI-like domain J154_03199 SM00867 YceI-like domain J154_03211 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_03217 SM00028 Tetratricopeptide repeats J154_03237 SM00812 Alpha-L-fucosidase J154_03238 SM00636 J154_03238 J154_03241 SM00758 J154_03241 J154_03241 SM01217 J154_03241 J154_03247 SM01149 J154_03247 J154_03254 SM00369 Leucine-rich repeats, typical (most populated) subfamily J154_03258 SM00260 Two component signalling adaptor domain J154_03260 SM00073 Histidine Phosphotransfer domain J154_03260 SM00260 Two component signalling adaptor domain J154_03260 SM00387 Histidine kinase-like ATPases J154_03260 SM00448 cheY-homologous receiver domain J154_03260 SM01231 J154_03260 J154_03261 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03262 SM00260 Two component signalling adaptor domain J154_03263 SM00448 cheY-homologous receiver domain J154_03264 SM00448 cheY-homologous receiver domain J154_03269 SM00491 J154_03269 J154_03274 SM00954 Region found in RelA / SpoT proteins J154_03283 SM00382 ATPases associated with a variety of cellular activities J154_03283 SM00487 DEAD-like helicases superfamily J154_03283 SM00490 helicase superfamily c-terminal domain J154_03283 SM00847 Helicase associated domain (HA2) Add an annotation J154_03285 SM00341 Helicase and RNase D C-terminal J154_03285 SM00487 DEAD-like helicases superfamily J154_03285 SM00490 helicase superfamily c-terminal domain J154_03285 SM00956 J154_03285 J154_03287 SM00448 cheY-homologous receiver domain J154_03292 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03292 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_03295 SM00448 cheY-homologous receiver domain J154_03296 SM00091 PAS domain J154_03296 SM00911 HWE histidine kinase J154_03307 SM00382 ATPases associated with a variety of cellular activities J154_03310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J154_03317 SM00834 Putative regulatory protein J154_03326 SM00382 ATPases associated with a variety of cellular activities J154_03346 SM00855 Phosphoglycerate mutase family J154_03358 SM00382 ATPases associated with a variety of cellular activities J154_03358 SM01086 C-terminal, D2-small domain, of ClpB protein J154_03359 SM00382 ATPases associated with a variety of cellular activities J154_03361 SM00062 Bacterial periplasmic substrate-binding proteins J154_03376 SM00564 beta-propeller repeat J154_03377 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03398 SM01126 J154_03398 J154_03400 SM00881 CoA binding domain J154_03402 SM00387 Histidine kinase-like ATPases J154_03402 SM00388 His Kinase A (phosphoacceptor) domain J154_03403 SM00382 ATPases associated with a variety of cellular activities J154_03403 SM00448 cheY-homologous receiver domain J154_03417 SM00387 Histidine kinase-like ATPases J154_03417 SM00388 His Kinase A (phosphoacceptor) domain J154_03418 SM00448 cheY-homologous receiver domain J154_03418 SM00862 Transcriptional regulatory protein, C terminal J154_03421 SM00642 Alpha-amylase domain J154_03422 SM00528 Domain in histone-like proteins of HNS family J154_03424 SM00318 Staphylococcal nuclease homologues J154_03439 SM00387 Histidine kinase-like ATPases J154_03439 SM00388 His Kinase A (phosphoacceptor) domain J154_03440 SM00448 cheY-homologous receiver domain J154_03442 SM00646 J154_03442 J154_03451 SM00530 Helix-turn-helix XRE-family like proteins J154_03455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_03455 SM00387 Histidine kinase-like ATPases J154_03459 SM00255 Toll - interleukin 1 - resistance J154_03463 SM00869 Autotransporter beta-domain J154_03473 SM00354 helix_turn _helix lactose operon repressor J154_03479 SM00967 RNA 2'-O ribose methyltransferase substrate binding J154_03500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_03500 SM00387 Histidine kinase-like ATPases J154_03506 SM00506 Appr-1"-p processing enzyme J154_03515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J154_03520 SM00849 Metallo-beta-lactamase superfamily J154_03523 SM00382 ATPases associated with a variety of cellular activities J154_03535 SM00861 Transketolase, pyrimidine binding domain J154_03538 SM00028 Tetratricopeptide repeats J154_03538 SM00327 von Willebrand factor (vWF) type A domain J154_03539 SM00327 von Willebrand factor (vWF) type A domain J154_03542 SM00382 ATPases associated with a variety of cellular activities J154_03544 SM00965 Secretin and TonB N terminus short domain J154_03554 SM00487 DEAD-like helicases superfamily J154_03554 SM00490 helicase superfamily c-terminal domain J154_03556 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J154_03556 SM00954 Region found in RelA / SpoT proteins J154_03557 SM01409 J154_03557 J154_03558 SM00072 Guanylate kinase homologues. J154_03563 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_03568 SM01011 Aminopeptidase P, N-terminal domain J154_03583 SM00028 Tetratricopeptide repeats J154_03583 SM00382 ATPases associated with a variety of cellular activities J154_03583 SM00421 helix_turn_helix, Lux Regulon J154_03597 SM00464 Found in ATP-dependent protease La (LON) J154_03607 SM00342 helix_turn_helix, arabinose operon control protein J154_03608 SM00862 Transcriptional regulatory protein, C terminal J154_03612 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03618 SM00917 LeuA allosteric (dimerisation) domain J154_03619 SM01329 J154_03619 J154_03623 SM00267 diguanylate cyclase J154_03633 SM00919 Malic enzyme, NAD binding domain J154_03633 SM01274 J154_03633 J154_03636 SM00387 Histidine kinase-like ATPases J154_03636 SM00388 His Kinase A (phosphoacceptor) domain J154_03636 SM00448 cheY-homologous receiver domain J154_03644 SM00421 helix_turn_helix, Lux Regulon J154_03644 SM00448 cheY-homologous receiver domain J154_03646 SM00387 Histidine kinase-like ATPases J154_03646 SM00388 His Kinase A (phosphoacceptor) domain J154_03647 SM00448 cheY-homologous receiver domain J154_03647 SM00862 Transcriptional regulatory protein, C terminal J154_03651 SM00822 J154_03651 J154_03652 SM00354 helix_turn _helix lactose operon repressor J154_03655 SM00642 Alpha-amylase domain J154_03657 SM01154 J154_03657 J154_03664 SM00450 Rhodanese Homology Domain J154_03677 SM00028 Tetratricopeptide repeats J154_03692 SM00345 helix_turn_helix gluconate operon transcriptional repressor J154_03692 SM00866 J154_03692 J154_03704 SM00382 ATPases associated with a variety of cellular activities J154_03709 SM01211 J154_03709 J154_03722 SM00656 J154_03722 J154_03728 SM00528 Domain in histone-like proteins of HNS family J154_03731 SM00382 ATPases associated with a variety of cellular activities J154_03737 SM00882 Coenzyme A transferase J154_03738 SM00882 Coenzyme A transferase J154_03741 SM00984 UDP binding domain J154_03746 SM00893 Electron transfer flavoprotein domain J154_03747 SM00893 Electron transfer flavoprotein domain J154_03761 SM00382 ATPases associated with a variety of cellular activities J154_03764 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_03771 SM00487 DEAD-like helicases superfamily J154_03771 SM00490 helicase superfamily c-terminal domain J154_03778 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_03785 SM00825 Beta-ketoacyl synthase J154_03800 SM00382 ATPases associated with a variety of cellular activities J154_03804 SM00382 ATPases associated with a variety of cellular activities J154_03804 SM00387 Histidine kinase-like ATPases J154_03804 SM00448 cheY-homologous receiver domain J154_03807 SM00830 Chorismate mutase type II J154_03809 SM00382 ATPases associated with a variety of cellular activities J154_03823 SM00986 Uracil DNA glycosylase superfamily J154_03823 SM00987 UreE urease accessory protein, C-terminal domain J154_03829 SM00382 ATPases associated with a variety of cellular activities J154_03829 SM00930 J154_03829 J154_03833 SM00387 Histidine kinase-like ATPases J154_03833 SM00388 His Kinase A (phosphoacceptor) domain J154_03833 SM00448 cheY-homologous receiver domain J154_03843 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_03843 SM00091 PAS domain J154_03843 SM00387 Histidine kinase-like ATPases J154_03843 SM00388 His Kinase A (phosphoacceptor) domain J154_03843 SM00448 cheY-homologous receiver domain J154_03847 SM01005 Alanine racemase, C-terminal domain J154_03849 SM00344 helix_turn_helix ASNC type J154_03860 SM00382 ATPases associated with a variety of cellular activities J154_03862 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J154_03863 SM00986 Uracil DNA glycosylase superfamily J154_03863 SM00987 UreE urease accessory protein, C-terminal domain J154_03864 SM00729 Elongator protein 3, MiaB family, Radical SAM J154_03877 SM00448 cheY-homologous receiver domain J154_03877 SM00850 LytTr DNA-binding domain J154_03878 SM00387 Histidine kinase-like ATPases J154_03885 SM00091 PAS domain J154_03885 SM00138 Methyltransferase, chemotaxis proteins J154_03885 SM00911 HWE histidine kinase J154_03886 SM00448 cheY-homologous receiver domain J154_03888 SM00382 ATPases associated with a variety of cellular activities J154_03888 SM00448 cheY-homologous receiver domain J154_03899 SM00382 ATPases associated with a variety of cellular activities J154_03914 SM00382 ATPases associated with a variety of cellular activities J154_03915 SM00631 J154_03915 J154_03923 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J154_03923 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_03924 SM00477 DNA/RNA non-specific endonuclease J154_03924 SM00892 DNA/RNA non-specific endonuclease J154_03955 SM00257 Lysin motif J154_03960 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J154_03960 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J154_03960 SM00493 J154_03960 J154_03971 SM00487 DEAD-like helicases superfamily J154_03971 SM00490 helicase superfamily c-terminal domain J154_03978 SM00986 Uracil DNA glycosylase superfamily J154_03978 SM00987 UreE urease accessory protein, C-terminal domain J154_03979 SM00448 cheY-homologous receiver domain J154_03981 SM00382 ATPases associated with a variety of cellular activities J154_03982 SM00487 DEAD-like helicases superfamily J154_03982 SM00490 helicase superfamily c-terminal domain J154_03984 SM00357 Cold shock protein domain J154_03984 SM00382 ATPases associated with a variety of cellular activities J154_03984 SM00959 Rho termination factor, N-terminal domain J154_03990 SM00487 DEAD-like helicases superfamily J154_03999 SM00257 Lysin motif J154_04005 SM01150 J154_04005 J154_04014 SM00644 J154_04014 J154_04016 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J154_04023 SM01217 J154_04023 J154_04024 SM00905 Dihydroneopterin aldolase J154_04029 SM00400 zinc finger J154_04029 SM00493 J154_04029 J154_04029 SM00766 DNA primase DnaG DnaB-binding J154_04051 SM00363 S4 RNA-binding domain J154_04060 SM00470 ParB-like nuclease domain J154_04064 SM01259 J154_04064 J154_04070 SM00836 DALR anticodon binding domain J154_04070 SM01016 Arginyl tRNA synthetase N terminal dom J154_04076 SM00823 Phosphopantetheine attachment site J154_04076 SM00824 Thioesterase J154_04083 SM00938 Nitrogen regulatory protein P-II J154_04085 SM00382 ATPases associated with a variety of cellular activities J154_04088 SM00052 Putative diguanylate phosphodiesterase J154_04096 SM00244 prohibitin homologues J154_04106 SM00448 cheY-homologous receiver domain J154_04106 SM00862 Transcriptional regulatory protein, C terminal J154_04107 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J154_04107 SM00387 Histidine kinase-like ATPases J154_04107 SM00388 His Kinase A (phosphoacceptor) domain J154_04111 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J154_04120 SM01060 J154_04120 J154_04123 SM00421 helix_turn_helix, Lux Regulon J154_04123 SM00448 cheY-homologous receiver domain J154_04126 SM00382 ATPases associated with a variety of cellular activities J154_04135 SM00849 Metallo-beta-lactamase superfamily J154_04141 SM00960 Roadblock/LC7 domain J154_04154 SM00387 Histidine kinase-like ATPases J154_04154 SM00388 His Kinase A (phosphoacceptor) domain J154_04155 SM00448 cheY-homologous receiver domain J154_04155 SM00862 Transcriptional regulatory protein, C terminal J154_04159 SM00248 ankyrin repeats J154_04160 SM01060 J154_04160 J154_04161 SM00491 J154_04161 J154_04167 SM00477 DNA/RNA non-specific endonuclease J154_04167 SM00892 DNA/RNA non-specific endonuclease J154_04170 SM01004 Delta-aminolevulinic acid dehydratase J154_04178 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J154_04182 SM00382 ATPases associated with a variety of cellular activities J154_04184 SM00530 Helix-turn-helix XRE-family like proteins J154_04192 SM00342 helix_turn_helix, arabinose operon control protein J154_04194 SM00382 ATPases associated with a variety of cellular activities J154_04206 SM00881 CoA binding domain J154_04207 SM00116 Domain in cystathionine beta-synthase and other proteins. J154_04207 SM00924 MgtE intracellular N domain J154_04208 SM01057 Eukaryotic-type carbonic anhydrase J154_04213 SM00248 ankyrin repeats J154_04215 SM00825 Beta-ketoacyl synthase J154_04220 SM00822 J154_04220 J154_04229 SM00563 Phosphate acyltransferases J154_04240 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J154_04240 SM00474 3'-5' exonuclease J154_04240 SM00475 5'-3' exonuclease J154_04240 SM00482 DNA polymerase A domain J154_04243 SM00912 haemagglutination activity domain J154_04247 SM00331 Sigma factor PP2C-like phosphatases J154_04247 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J154_04252 SM00240 Forkhead associated domain J154_04255 SM00028 Tetratricopeptide repeats J154_04257 SM00220 Serine/Threonine protein kinases, catalytic domain J154_04261 SM00965 Secretin and TonB N terminus short domain J154_04263 SM00915 Jacalin-like lectin domain J154_04269 SM00382 ATPases associated with a variety of cellular activities J154_04269 SM01086 C-terminal, D2-small domain, of ClpB protein J154_04277 SM00342 helix_turn_helix, arabinose operon control protein J154_04279 SM01266 J154_04279 J154_04282 SM00155 Phospholipase D. Active site motifs. J154_04311 SM00421 helix_turn_helix, Lux Regulon J154_04311 SM00448 cheY-homologous receiver domain J154_04321 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J154_04325 SM00346 helix_turn_helix isocitrate lyase regulation J154_04327 SM00091 PAS domain J154_04327 SM00387 Histidine kinase-like ATPases J154_04327 SM00388 His Kinase A (phosphoacceptor) domain J154_04327 SM00448 cheY-homologous receiver domain J154_04332 SM00564 beta-propeller repeat J154_04342 SM00382 ATPases associated with a variety of cellular activities J154_04344 SM00836 DALR anticodon binding domain J154_04346 SM00382 ATPases associated with a variety of cellular activities J154_04360 SM00354 helix_turn _helix lactose operon repressor J154_04363 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J154_04365 SM00758 J154_04365 J154_04365 SM01217 J154_04365 J154_04369 SM00612 J154_04369 J154_04376 SM01007 Class II Aldolase and Adducin N-terminal domain J154_04381 SM00633 Glycosyl hydrolase family 10 J154_04384 SM00633 Glycosyl hydrolase family 10 J154_04386 SM00633 Glycosyl hydrolase family 10 J154_04400 SM00829 Enoylreductase J154_04401 SM00563 Phosphate acyltransferases J154_04403 SM00354 helix_turn _helix lactose operon repressor J154_04407 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J154_04415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_04415 SM00388 His Kinase A (phosphoacceptor) domain J154_04418 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J154_04418 SM01232 J154_04418 J154_04426 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_04426 SM00091 PAS domain J154_04437 SM00347 helix_turn_helix multiple antibiotic resistance protein J154_04444 SM00155 Phospholipase D. Active site motifs. J154_04460 SM00796 Allophanate hydrolase subunit 1 J154_04460 SM00797 Allophanate hydrolase subunit 2 J154_04460 SM00878 Biotin carboxylase C-terminal domain J154_04474 SM00382 ATPases associated with a variety of cellular activities J154_04484 SM00829 Enoylreductase J154_04492 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J154_04492 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J154_04492 SM00091 PAS domain J154_04492 SM00267 diguanylate cyclase J154_04498 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J154_04504 SM00014 Acid phosphatase homologues J154_04506 SM00028 Tetratricopeptide repeats