AB890_00005 SM00382 ATPases associated with a variety of cellular activities AB890_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AB890_00010 SM00480 DNA polymerase III beta subunit AB890_00020 SM00387 Histidine kinase-like ATPases AB890_00020 SM00433 TopoisomeraseII AB890_00035 SM00028 Tetratricopeptide repeats AB890_00070 SM00155 Phospholipase D. Active site motifs. AB890_00085 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_00115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_00115 SM00245 tail specific protease AB890_00160 SM00829 Enoylreductase AB890_00285 SM00382 ATPases associated with a variety of cellular activities AB890_00395 SM00487 DEAD-like helicases superfamily AB890_00395 SM00490 helicase superfamily c-terminal domain AB890_00415 SM00822 AB890_00415 AB890_00420 SM00822 AB890_00420 AB890_00675 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AB890_00700 SM00421 helix_turn_helix, Lux Regulon AB890_00700 SM00448 cheY-homologous receiver domain AB890_00720 SM00862 Transcriptional regulatory protein, C terminal AB890_00800 SM00642 Alpha-amylase domain AB890_00805 SM00642 Alpha-amylase domain AB890_00810 SM00642 Alpha-amylase domain AB890_00860 SM00354 helix_turn _helix lactose operon repressor AB890_00900 SM00344 helix_turn_helix ASNC type AB890_00920 SM00382 ATPases associated with a variety of cellular activities AB890_00935 SM00382 ATPases associated with a variety of cellular activities AB890_00970 SM00530 Helix-turn-helix XRE-family like proteins AB890_01000 SM00855 Phosphoglycerate mutase family AB890_01005 SM00867 YceI-like domain AB890_01010 SM00155 Phospholipase D. Active site motifs. AB890_01020 SM00563 Phosphate acyltransferases AB890_01035 SM00028 Tetratricopeptide repeats AB890_01045 SM00829 Enoylreductase AB890_01060 SM01230 AB890_01060 AB890_01065 SM00938 Nitrogen regulatory protein P-II AB890_01075 SM00387 Histidine kinase-like ATPases AB890_01075 SM00388 His Kinase A (phosphoacceptor) domain AB890_01080 SM00382 ATPases associated with a variety of cellular activities AB890_01080 SM00448 cheY-homologous receiver domain AB890_01140 SM00450 Rhodanese Homology Domain AB890_01165 SM00387 Histidine kinase-like ATPases AB890_01165 SM00388 His Kinase A (phosphoacceptor) domain AB890_01170 SM00382 ATPases associated with a variety of cellular activities AB890_01170 SM00448 cheY-homologous receiver domain AB890_01280 SM00563 Phosphate acyltransferases AB890_01315 SM00342 helix_turn_helix, arabinose operon control protein AB890_01340 SM00100 Cyclic nucleotide-monophosphate binding domain AB890_01340 SM00267 diguanylate cyclase AB890_01365 SM00878 Biotin carboxylase C-terminal domain AB890_01390 SM00953 AB890_01390 AB890_01430 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB890_01460 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_01495 SM00829 Enoylreductase AB890_01525 SM00487 DEAD-like helicases superfamily AB890_01525 SM00490 helicase superfamily c-terminal domain AB890_01525 SM00847 Helicase associated domain (HA2) Add an annotation AB890_01660 SM00422 helix_turn_helix, mercury resistance AB890_01695 SM00448 cheY-homologous receiver domain AB890_01695 SM00862 Transcriptional regulatory protein, C terminal AB890_01700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_01700 SM00387 Histidine kinase-like ATPases AB890_01700 SM00388 His Kinase A (phosphoacceptor) domain AB890_01850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_01855 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_01875 SM00342 helix_turn_helix, arabinose operon control protein AB890_01905 SM00420 helix_turn_helix, Deoxyribose operon repressor AB890_01905 SM01134 AB890_01905 AB890_01920 SM00882 Coenzyme A transferase AB890_01925 SM00882 Coenzyme A transferase AB890_01945 SM00998 Adenylosuccinate lyase C-terminus AB890_01965 SM00346 helix_turn_helix isocitrate lyase regulation AB890_01970 SM00090 RIO-like kinase AB890_01985 SM01228 AB890_01985 AB890_02040 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_02040 SM00876 Biotin and Thiamin Synthesis associated domain AB890_02060 SM00369 Leucine-rich repeats, typical (most populated) subfamily AB890_02155 SM00382 ATPases associated with a variety of cellular activities AB890_02215 SM00267 diguanylate cyclase AB890_02225 SM00642 Alpha-amylase domain AB890_02230 SM00642 Alpha-amylase domain AB890_02240 SM00642 Alpha-amylase domain AB890_02250 SM00642 Alpha-amylase domain AB890_02300 SM00822 AB890_02300 AB890_02310 SM00487 DEAD-like helicases superfamily AB890_02310 SM00490 helicase superfamily c-terminal domain AB890_02320 SM00326 Src homology 3 domains AB890_02325 SM00861 Transketolase, pyrimidine binding domain AB890_02335 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AB890_02355 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_02450 SM00271 DnaJ molecular chaperone homology domain AB890_02470 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB890_02490 SM00903 Flavin reductase like domain AB890_02510 SM00100 Cyclic nucleotide-monophosphate binding domain AB890_02510 SM00419 helix_turn_helix, cAMP Regulatory protein AB890_02565 SM00387 Histidine kinase-like ATPases AB890_02565 SM00388 His Kinase A (phosphoacceptor) domain AB890_02565 SM00448 cheY-homologous receiver domain AB890_02570 SM00052 Putative diguanylate phosphodiesterase AB890_02570 SM00267 diguanylate cyclase AB890_02570 SM00448 cheY-homologous receiver domain AB890_02635 SM00563 Phosphate acyltransferases AB890_02660 SM01209 AB890_02660 AB890_02660 SM01210 AB890_02660 AB890_02670 SM00798 AICARFT/IMPCHase bienzyme AB890_02670 SM00851 MGS-like domain AB890_02685 SM00195 Dual specificity phosphatase, catalytic domain AB890_02705 SM00563 Phosphate acyltransferases AB890_02730 SM00530 Helix-turn-helix XRE-family like proteins AB890_02755 SM00878 Biotin carboxylase C-terminal domain AB890_02785 SM00342 helix_turn_helix, arabinose operon control protein AB890_02795 SM00234 in StAR and phosphatidylcholine transfer protein AB890_02815 SM00883 Chaperonin 10 Kd subunit AB890_02875 SM00944 Pro-kumamolisin, activation domain AB890_02895 SM00867 YceI-like domain AB890_02950 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB890_02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_02960 SM00895 AB890_02960 AB890_02980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_02980 SM00331 Sigma factor PP2C-like phosphatases AB890_03020 SM00342 helix_turn_helix, arabinose operon control protein AB890_03085 SM00267 diguanylate cyclase AB890_03115 SM00062 Bacterial periplasmic substrate-binding proteins AB890_03155 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB890_03155 SM01232 AB890_03155 AB890_03170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_03180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_03180 SM00091 PAS domain AB890_03180 SM00267 diguanylate cyclase AB890_03185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_03185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_03185 SM01049 AB890_03185 AB890_03190 SM00637 AB890_03190 AB890_03200 SM00267 diguanylate cyclase AB890_03230 SM00448 cheY-homologous receiver domain AB890_03230 SM00850 LytTr DNA-binding domain AB890_03310 SM00382 ATPases associated with a variety of cellular activities AB890_03310 SM01086 C-terminal, D2-small domain, of ClpB protein AB890_03340 SM00267 diguanylate cyclase AB890_03345 SM01263 AB890_03345 AB890_03365 SM00564 beta-propeller repeat AB890_03370 SM00062 Bacterial periplasmic substrate-binding proteins AB890_03370 SM00248 ankyrin repeats AB890_03385 SM00829 Enoylreductase AB890_03395 SM00382 ATPases associated with a variety of cellular activities AB890_03405 SM00268 Actin AB890_03430 SM00710 Parallel beta-helix repeats AB890_03450 SM00936 Penicillin-binding protein 5, C-terminal domain AB890_03470 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_03475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_03475 SM00245 tail specific protease AB890_03530 SM01350 AB890_03530 AB890_03540 SM00749 bacterial OsmY and nodulation domain AB890_03545 SM00387 Histidine kinase-like ATPases AB890_03545 SM00388 His Kinase A (phosphoacceptor) domain AB890_03550 SM00448 cheY-homologous receiver domain AB890_03555 SM00387 Histidine kinase-like ATPases AB890_03555 SM00388 His Kinase A (phosphoacceptor) domain AB890_03555 SM00448 cheY-homologous receiver domain AB890_03585 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB890_03610 SM00382 ATPases associated with a variety of cellular activities AB890_03680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_03680 SM00866 AB890_03680 AB890_03690 SM00354 helix_turn _helix lactose operon repressor AB890_03755 SM00849 Metallo-beta-lactamase superfamily AB890_03760 SM00342 helix_turn_helix, arabinose operon control protein AB890_03775 SM00448 cheY-homologous receiver domain AB890_03775 SM00862 Transcriptional regulatory protein, C terminal AB890_03795 SM00829 Enoylreductase AB890_03815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_03835 SM00382 ATPases associated with a variety of cellular activities AB890_03895 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AB890_03925 SM00387 Histidine kinase-like ATPases AB890_03925 SM00388 His Kinase A (phosphoacceptor) domain AB890_03930 SM00448 cheY-homologous receiver domain AB890_03930 SM00862 Transcriptional regulatory protein, C terminal AB890_04040 SM00842 Cell division protein FtsA AB890_04045 SM00864 Tubulin/FtsZ family, GTPase domain AB890_04045 SM00865 Tubulin/FtsZ family, C-terminal domain AB890_04065 SM00957 SecA DEAD-like domain AB890_04065 SM00958 SecA preprotein cross-linking domain AB890_04090 SM00829 Enoylreductase AB890_04095 SM00944 Pro-kumamolisin, activation domain AB890_04110 SM00642 Alpha-amylase domain AB890_04145 SM00996 S-adenosyl-L-homocysteine hydrolase AB890_04145 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB890_04260 SM00382 ATPases associated with a variety of cellular activities AB890_04280 SM00382 ATPases associated with a variety of cellular activities AB890_04290 SM00448 cheY-homologous receiver domain AB890_04290 SM00862 Transcriptional regulatory protein, C terminal AB890_04295 SM00387 Histidine kinase-like ATPases AB890_04295 SM00388 His Kinase A (phosphoacceptor) domain AB890_04350 SM00382 ATPases associated with a variety of cellular activities AB890_04360 SM00382 ATPases associated with a variety of cellular activities AB890_04420 SM00382 ATPases associated with a variety of cellular activities AB890_04435 SM00650 Ribosomal RNA adenine dimethylases AB890_04500 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_04500 SM00895 AB890_04500 AB890_04535 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_04615 SM00448 cheY-homologous receiver domain AB890_04620 SM00387 Histidine kinase-like ATPases AB890_04620 SM00388 His Kinase A (phosphoacceptor) domain AB890_04620 SM00448 cheY-homologous receiver domain AB890_04625 SM00421 helix_turn_helix, Lux Regulon AB890_04690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB890_04690 SM00475 5'-3' exonuclease AB890_04720 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB890_04720 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB890_04835 SM00852 Probable molybdopterin binding domain AB890_04840 SM00028 Tetratricopeptide repeats AB890_04845 SM00937 AB890_04845 AB890_04855 SM00028 Tetratricopeptide repeats AB890_04875 SM01400 AB890_04875 AB890_04925 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB890_04925 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB890_04930 SM00649 Ribosomal protein L11/L12 AB890_04955 SM00663 RNA polymerase I subunit A N-terminus AB890_04970 SM00838 Elongation factor G C-terminus AB890_04970 SM00889 Elongation factor G, domain IV AB890_04980 SM01403 AB890_04980 AB890_05000 SM01382 AB890_05000 AB890_05000 SM01383 AB890_05000 AB890_05015 SM00322 K homology RNA-binding domain AB890_05035 SM01374 AB890_05035 AB890_05040 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB890_05100 SM00363 S4 RNA-binding domain AB890_05100 SM01390 AB890_05100 AB890_05105 SM00662 RNA polymerases D AB890_05150 SM00838 Elongation factor G C-terminus AB890_05180 SM00829 Enoylreductase AB890_05225 SM00382 ATPases associated with a variety of cellular activities AB890_05235 SM00829 Enoylreductase AB890_05260 SM00855 Phosphoglycerate mutase family AB890_05310 SM00014 Acid phosphatase homologues AB890_05330 SM00091 PAS domain AB890_05330 SM00387 Histidine kinase-like ATPases AB890_05330 SM00388 His Kinase A (phosphoacceptor) domain AB890_05335 SM00448 cheY-homologous receiver domain AB890_05335 SM00862 Transcriptional regulatory protein, C terminal AB890_05355 SM01329 AB890_05355 AB890_05500 SM00387 Histidine kinase-like ATPases AB890_05520 SM00382 ATPases associated with a variety of cellular activities AB890_05520 SM00994 ClpX C4-type zinc finger AB890_05520 SM01086 C-terminal, D2-small domain, of ClpB protein AB890_05525 SM00382 ATPases associated with a variety of cellular activities AB890_05525 SM00464 Found in ATP-dependent protease La (LON) AB890_05530 SM00411 bacterial (prokaryotic) histone like domain AB890_05555 SM00257 Lysin motif AB890_05560 SM00849 Metallo-beta-lactamase superfamily AB890_05575 SM00479 AB890_05575 AB890_05580 SM00331 Sigma factor PP2C-like phosphatases AB890_05580 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB890_05605 SM00849 Metallo-beta-lactamase superfamily AB890_05610 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_05680 SM00382 ATPases associated with a variety of cellular activities AB890_05690 SM00493 AB890_05690 AB890_05715 SM00382 ATPases associated with a variety of cellular activities AB890_05760 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB890_05765 SM00822 AB890_05765 AB890_05775 SM00825 Beta-ketoacyl synthase AB890_05810 SM00382 ATPases associated with a variety of cellular activities AB890_05850 SM01359 AB890_05850 AB890_05850 SM01360 AB890_05850 AB890_05885 SM00271 DnaJ molecular chaperone homology domain AB890_05890 SM00448 cheY-homologous receiver domain AB890_05895 SM00244 prohibitin homologues AB890_05900 SM00244 prohibitin homologues AB890_05905 SM01321 AB890_05905 AB890_05910 SM00788 Adenylosuccinate synthetase AB890_05925 SM00822 AB890_05925 AB890_05980 SM00220 Serine/Threonine protein kinases, catalytic domain AB890_05995 SM00855 Phosphoglycerate mutase family AB890_06050 SM00052 Putative diguanylate phosphodiesterase AB890_06055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_06065 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB890_06070 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB890_06085 SM00974 AB890_06085 AB890_06105 SM00966 SpoVT / AbrB like domain AB890_06125 SM00481 DNA polymerase alpha chain like domain AB890_06135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_06170 SM00091 PAS domain AB890_06170 SM00342 helix_turn_helix, arabinose operon control protein AB890_06185 SM01060 AB890_06185 AB890_06235 SM00448 cheY-homologous receiver domain AB890_06235 SM00862 Transcriptional regulatory protein, C terminal AB890_06240 SM00387 Histidine kinase-like ATPases AB890_06240 SM00388 His Kinase A (phosphoacceptor) domain AB890_06280 SM00421 helix_turn_helix, Lux Regulon AB890_06280 SM00448 cheY-homologous receiver domain AB890_06295 SM00478 endonuclease III AB890_06315 SM00244 prohibitin homologues AB890_06400 SM00904 Riboflavin kinase AB890_06445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_06450 SM00382 ATPases associated with a variety of cellular activities AB890_06460 SM00862 Transcriptional regulatory protein, C terminal AB890_06465 SM00342 helix_turn_helix, arabinose operon control protein AB890_06500 SM00387 Histidine kinase-like ATPases AB890_06500 SM00388 His Kinase A (phosphoacceptor) domain AB890_06505 SM00387 Histidine kinase-like ATPases AB890_06505 SM00388 His Kinase A (phosphoacceptor) domain AB890_06505 SM00448 cheY-homologous receiver domain AB890_06530 SM00387 Histidine kinase-like ATPases AB890_06530 SM00388 His Kinase A (phosphoacceptor) domain AB890_06530 SM00448 cheY-homologous receiver domain AB890_06540 SM00138 Methyltransferase, chemotaxis proteins AB890_06545 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_06545 SM00387 Histidine kinase-like ATPases AB890_06545 SM00388 His Kinase A (phosphoacceptor) domain AB890_06545 SM00448 cheY-homologous receiver domain AB890_06550 SM00091 PAS domain AB890_06550 SM00387 Histidine kinase-like ATPases AB890_06550 SM00388 His Kinase A (phosphoacceptor) domain AB890_06555 SM00448 cheY-homologous receiver domain AB890_06565 SM00813 Alpha-L-arabinofuranosidase C-terminus AB890_06585 SM00382 ATPases associated with a variety of cellular activities AB890_06585 SM00962 SRP54-type protein, GTPase domain AB890_06585 SM00963 SRP54-type protein, helical bundle domain AB890_06660 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB890_06660 SM00534 ATPase domain of DNA mismatch repair MUTS family AB890_06680 SM00812 Alpha-L-fucosidase AB890_06705 SM00530 Helix-turn-helix XRE-family like proteins AB890_06755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_06760 SM00838 Elongation factor G C-terminus AB890_06775 SM00358 Double-stranded RNA binding motif AB890_06775 SM00535 Ribonuclease III family AB890_06790 SM00448 cheY-homologous receiver domain AB890_06800 SM01118 AB890_06800 AB890_06835 SM00357 Cold shock protein domain AB890_06850 SM00487 DEAD-like helicases superfamily AB890_06850 SM00490 helicase superfamily c-terminal domain AB890_06880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_06880 SM00267 diguanylate cyclase AB890_06900 SM00869 Autotransporter beta-domain AB890_06905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB890_06910 SM00671 Sel1-like repeats. AB890_06910 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB890_07110 SM00382 ATPases associated with a variety of cellular activities AB890_07195 SM00481 DNA polymerase alpha chain like domain AB890_07235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_07265 SM00267 diguanylate cyclase AB890_07290 SM00972 Spore Coat Protein U domain AB890_07305 SM00972 Spore Coat Protein U domain AB890_07315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_07335 SM01172 AB890_07335 AB890_07340 SM00710 Parallel beta-helix repeats AB890_07340 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AB890_07375 SM00434 DNA Topoisomerase IV AB890_07380 SM00342 helix_turn_helix, arabinose operon control protein AB890_07385 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_07410 SM01217 AB890_07410 AB890_07415 SM00631 AB890_07415 AB890_07445 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_07465 SM00382 ATPases associated with a variety of cellular activities AB890_07480 SM00947 Carbonic anhydrase AB890_07495 SM00357 Cold shock protein domain AB890_07605 SM00267 diguanylate cyclase AB890_07615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_07615 SM00267 diguanylate cyclase AB890_07630 SM00530 Helix-turn-helix XRE-family like proteins AB890_07650 SM00530 Helix-turn-helix XRE-family like proteins AB890_07750 SM00271 DnaJ molecular chaperone homology domain AB890_07790 SM00382 ATPases associated with a variety of cellular activities AB890_07815 SM00861 Transketolase, pyrimidine binding domain AB890_07825 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB890_07845 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_07845 SM01091 Transporter associated domain AB890_07875 SM00382 ATPases associated with a variety of cellular activities AB890_07880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_07895 SM00984 UDP binding domain AB890_07915 SM00354 helix_turn _helix lactose operon repressor AB890_07935 SM01018 B12 binding domain AB890_07945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB890_07965 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_07965 SM00357 Cold shock protein domain AB890_07965 SM00955 AB890_07965 AB890_07975 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB890_07980 SM00267 diguanylate cyclase AB890_07985 SM00479 AB890_07985 AB890_08000 SM00382 ATPases associated with a variety of cellular activities AB890_08035 SM00947 Carbonic anhydrase AB890_08045 SM00478 endonuclease III AB890_08070 SM00450 Rhodanese Homology Domain AB890_08080 SM00644 AB890_08080 AB890_08100 SM00382 ATPases associated with a variety of cellular activities AB890_08105 SM00981 AB890_08105 AB890_08135 SM00479 AB890_08135 AB890_08160 SM00947 Carbonic anhydrase AB890_08205 SM00421 helix_turn_helix, Lux Regulon AB890_08205 SM00448 cheY-homologous receiver domain AB890_08265 SM00968 SMC proteins Flexible Hinge Domain AB890_08270 SM00771 ZipA, C-terminal domain (FtsZ-binding) AB890_08285 SM00292 breast cancer carboxy-terminal domain AB890_08285 SM00532 Ligase N family AB890_08305 SM00434 DNA Topoisomerase IV AB890_08310 SM00564 beta-propeller repeat AB890_08350 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_08350 SM00866 AB890_08350 AB890_08375 SM00240 Forkhead associated domain AB890_08395 SM00830 Chorismate mutase type II AB890_08440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_08440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_08450 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_08465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_08465 SM00091 PAS domain AB890_08465 SM00387 Histidine kinase-like ATPases AB890_08465 SM00388 His Kinase A (phosphoacceptor) domain AB890_08465 SM00448 cheY-homologous receiver domain AB890_08470 SM00448 cheY-homologous receiver domain AB890_08475 SM00382 ATPases associated with a variety of cellular activities AB890_08480 SM00091 PAS domain AB890_08480 SM00387 Histidine kinase-like ATPases AB890_08480 SM00388 His Kinase A (phosphoacceptor) domain AB890_08480 SM00448 cheY-homologous receiver domain AB890_08635 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_08645 SM00382 ATPases associated with a variety of cellular activities AB890_08670 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_08670 SM01091 Transporter associated domain AB890_08695 SM00387 Histidine kinase-like ATPases AB890_08695 SM00433 TopoisomeraseII AB890_08720 SM01192 AB890_08720 AB890_08720 SM01193 AB890_08720 AB890_08745 SM00463 Small MutS-related domain AB890_08765 SM00257 Lysin motif AB890_08775 SM01103 AB890_08775 AB890_08785 SM00382 ATPases associated with a variety of cellular activities AB890_08825 SM00382 ATPases associated with a variety of cellular activities AB890_08835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB890_08850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_08850 SM00091 PAS domain AB890_08850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_08905 SM00670 Large family of predicted nucleotide-binding domains AB890_08925 SM01130 AB890_08925 AB890_08950 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB890_08995 SM00758 AB890_08995 AB890_09025 SM00646 AB890_09025 AB890_09095 SM00052 Putative diguanylate phosphodiesterase AB890_09095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_09095 SM00267 diguanylate cyclase AB890_09105 SM00448 cheY-homologous receiver domain AB890_09110 SM00387 Histidine kinase-like ATPases AB890_09120 SM00014 Acid phosphatase homologues AB890_09195 SM00912 haemagglutination activity domain AB890_09240 SM00100 Cyclic nucleotide-monophosphate binding domain AB890_09240 SM00419 helix_turn_helix, cAMP Regulatory protein AB890_09315 SM01007 Class II Aldolase and Adducin N-terminal domain AB890_09360 SM00841 Elongation factor P, C-terminal AB890_09360 SM01185 AB890_09360 AB890_09365 SM00822 AB890_09365 AB890_09385 SM00899 AB890_09385 AB890_09420 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB890_09430 SM00851 MGS-like domain AB890_09430 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB890_09490 SM00850 LytTr DNA-binding domain AB890_09495 SM00937 AB890_09495 AB890_09505 SM00448 cheY-homologous receiver domain AB890_09505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_09510 SM00073 Histidine Phosphotransfer domain AB890_09510 SM00387 Histidine kinase-like ATPases AB890_09510 SM00388 His Kinase A (phosphoacceptor) domain AB890_09510 SM00448 cheY-homologous receiver domain AB890_09535 SM00966 SpoVT / AbrB like domain AB890_09555 SM00052 Putative diguanylate phosphodiesterase AB890_09555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_09555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_09555 SM00091 PAS domain AB890_09555 SM00267 diguanylate cyclase AB890_09560 SM00448 cheY-homologous receiver domain AB890_09570 SM00138 Methyltransferase, chemotaxis proteins AB890_09575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09625 SM01049 AB890_09625 AB890_09640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_09640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_09645 SM00073 Histidine Phosphotransfer domain AB890_09645 SM00260 Two component signalling adaptor domain AB890_09645 SM00387 Histidine kinase-like ATPases AB890_09645 SM01231 AB890_09645 AB890_09650 SM00448 cheY-homologous receiver domain AB890_09660 SM00260 Two component signalling adaptor domain AB890_09690 SM00220 Serine/Threonine protein kinases, catalytic domain AB890_09750 SM00530 Helix-turn-helix XRE-family like proteins AB890_09775 SM00073 Histidine Phosphotransfer domain AB890_09775 SM00260 Two component signalling adaptor domain AB890_09775 SM00387 Histidine kinase-like ATPases AB890_09775 SM01231 AB890_09775 AB890_09785 SM00448 cheY-homologous receiver domain AB890_09800 SM00382 ATPases associated with a variety of cellular activities AB890_09800 SM00962 SRP54-type protein, GTPase domain AB890_09815 SM00052 Putative diguanylate phosphodiesterase AB890_09815 SM00267 diguanylate cyclase AB890_09820 SM00267 diguanylate cyclase AB890_09830 SM00267 diguanylate cyclase AB890_09880 SM00382 ATPases associated with a variety of cellular activities AB890_09930 SM00822 AB890_09930 AB890_09955 SM00382 ATPases associated with a variety of cellular activities AB890_09960 SM00448 cheY-homologous receiver domain AB890_09970 SM00421 helix_turn_helix, Lux Regulon AB890_09970 SM00448 cheY-homologous receiver domain AB890_10010 SM00047 Lysozyme subfamily 2 AB890_10055 SM00260 Two component signalling adaptor domain AB890_10055 SM00448 cheY-homologous receiver domain AB890_10060 SM00858 AB890_10060 AB890_10075 SM00387 Histidine kinase-like ATPases AB890_10080 SM00052 Putative diguanylate phosphodiesterase AB890_10080 SM00267 diguanylate cyclase AB890_10080 SM00448 cheY-homologous receiver domain AB890_10085 SM00091 PAS domain AB890_10085 SM00387 Histidine kinase-like ATPases AB890_10090 SM00052 Putative diguanylate phosphodiesterase AB890_10090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_10090 SM00091 PAS domain AB890_10090 SM00267 diguanylate cyclase AB890_10100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_10125 SM00382 ATPases associated with a variety of cellular activities AB890_10125 SM01086 C-terminal, D2-small domain, of ClpB protein AB890_10130 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_10150 SM00382 ATPases associated with a variety of cellular activities AB890_10150 SM00843 AB890_10150 AB890_10170 SM00382 ATPases associated with a variety of cellular activities AB890_10200 SM00562 AB890_10200 AB890_10210 SM00028 Tetratricopeptide repeats AB890_10225 SM00564 beta-propeller repeat AB890_10230 SM00382 ATPases associated with a variety of cellular activities AB890_10235 SM00852 Probable molybdopterin binding domain AB890_10240 SM00450 Rhodanese Homology Domain AB890_10285 SM00852 Probable molybdopterin binding domain AB890_10310 SM00529 Helix-turn-helix diphteria tox regulatory element AB890_10320 SM00479 AB890_10320 AB890_10390 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_10390 SM00732 Likely ribonuclease with RNase H fold. AB890_10395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_10395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_10395 SM00091 PAS domain AB890_10395 SM00387 Histidine kinase-like ATPases AB890_10395 SM00388 His Kinase A (phosphoacceptor) domain AB890_10395 SM00448 cheY-homologous receiver domain AB890_10400 SM00448 cheY-homologous receiver domain AB890_10485 SM00382 ATPases associated with a variety of cellular activities AB890_10535 SM00382 ATPases associated with a variety of cellular activities AB890_10545 SM00849 Metallo-beta-lactamase superfamily AB890_10560 SM00382 ATPases associated with a variety of cellular activities AB890_10575 SM00226 Low molecular weight phosphatase family AB890_10585 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB890_10585 SM00465 GIY-YIG type nucleases (URI domain) AB890_10650 SM00984 UDP binding domain AB890_10670 SM00450 Rhodanese Homology Domain AB890_10675 SM00421 helix_turn_helix, Lux Regulon AB890_10675 SM00448 cheY-homologous receiver domain AB890_10680 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_10685 SM00363 S4 RNA-binding domain AB890_10725 SM01034 Sensors of blue-light using FAD AB890_10830 SM00448 cheY-homologous receiver domain AB890_10830 SM00850 LytTr DNA-binding domain AB890_10850 SM00869 Autotransporter beta-domain AB890_10870 SM00387 Histidine kinase-like ATPases AB890_10870 SM00388 His Kinase A (phosphoacceptor) domain AB890_10875 SM00421 helix_turn_helix, Lux Regulon AB890_10875 SM00448 cheY-homologous receiver domain AB890_10880 SM00869 Autotransporter beta-domain AB890_10885 SM00052 Putative diguanylate phosphodiesterase AB890_10960 SM00342 helix_turn_helix, arabinose operon control protein AB890_10965 SM00387 Histidine kinase-like ATPases AB890_10970 SM00421 helix_turn_helix, Lux Regulon AB890_10970 SM00448 cheY-homologous receiver domain AB890_10975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_11015 SM00530 Helix-turn-helix XRE-family like proteins AB890_11080 SM00966 SpoVT / AbrB like domain AB890_11125 SM00736 Dystroglycan-type cadherin-like domains. AB890_11150 SM00382 ATPases associated with a variety of cellular activities AB890_11200 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB890_11200 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB890_11200 SM00493 AB890_11200 AB890_11320 SM00342 helix_turn_helix, arabinose operon control protein AB890_11360 SM00487 DEAD-like helicases superfamily AB890_11615 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_11615 SM01240 AB890_11615 AB890_11640 SM00822 AB890_11640 AB890_11650 SM00028 Tetratricopeptide repeats AB890_11660 SM00411 bacterial (prokaryotic) histone like domain AB890_11665 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_11740 SM00354 helix_turn _helix lactose operon repressor AB890_11765 SM00363 S4 RNA-binding domain AB890_11790 SM00382 ATPases associated with a variety of cellular activities AB890_11840 SM00357 Cold shock protein domain AB890_11845 SM00382 ATPases associated with a variety of cellular activities AB890_11850 SM00382 ATPases associated with a variety of cellular activities AB890_11880 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AB890_11890 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB890_11905 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB890_11945 SM00840 AB890_11945 AB890_11970 SM01234 AB890_11970 AB890_12010 SM00849 Metallo-beta-lactamase superfamily AB890_12065 SM00841 Elongation factor P, C-terminal AB890_12065 SM01185 AB890_12065 AB890_12075 SM00052 Putative diguanylate phosphodiesterase AB890_12075 SM00267 diguanylate cyclase AB890_12075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_12110 SM00382 ATPases associated with a variety of cellular activities AB890_12115 SM00487 DEAD-like helicases superfamily AB890_12115 SM00490 helicase superfamily c-terminal domain AB890_12140 SM00357 Cold shock protein domain AB890_12145 SM01322 AB890_12145 AB890_12155 SM00052 Putative diguanylate phosphodiesterase AB890_12155 SM00267 diguanylate cyclase AB890_12170 SM00822 AB890_12170 AB890_12190 SM00853 MutL C terminal dimerisation domain AB890_12190 SM01340 AB890_12190 AB890_12195 SM00646 AB890_12195 AB890_12230 SM00474 3'-5' exonuclease AB890_12245 SM00528 Domain in histone-like proteins of HNS family AB890_12330 SM00857 Resolvase, N terminal domain AB890_12400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_12400 SM00267 diguanylate cyclase AB890_12405 SM00260 Two component signalling adaptor domain AB890_12410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_12410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_12420 SM00487 DEAD-like helicases superfamily AB890_12420 SM00490 helicase superfamily c-terminal domain AB890_12475 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_12500 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_12500 SM01091 Transporter associated domain AB890_12535 SM00382 ATPases associated with a variety of cellular activities AB890_12565 SM01230 AB890_12565 AB890_12575 SM01230 AB890_12575 AB890_12585 SM00267 diguanylate cyclase AB890_12585 SM00448 cheY-homologous receiver domain AB890_12640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_12640 SM00091 PAS domain AB890_12640 SM00387 Histidine kinase-like ATPases AB890_12640 SM00388 His Kinase A (phosphoacceptor) domain AB890_12640 SM00448 cheY-homologous receiver domain AB890_12640 SM01079 AB890_12640 AB890_12645 SM00448 cheY-homologous receiver domain AB890_12645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_12675 SM00354 helix_turn _helix lactose operon repressor AB890_12745 SM01323 AB890_12745 AB890_12760 SM00344 helix_turn_helix ASNC type AB890_12840 SM00387 Histidine kinase-like ATPases AB890_12885 SM00944 Pro-kumamolisin, activation domain AB890_12935 SM01130 AB890_12935 AB890_12960 SM00342 helix_turn_helix, arabinose operon control protein AB890_12965 SM00382 ATPases associated with a variety of cellular activities AB890_12965 SM00962 SRP54-type protein, GTPase domain AB890_12965 SM00963 SRP54-type protein, helical bundle domain AB890_12970 SM00478 endonuclease III AB890_12980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_12980 SM00091 PAS domain AB890_12980 SM00387 Histidine kinase-like ATPases AB890_12980 SM00388 His Kinase A (phosphoacceptor) domain AB890_12980 SM00448 cheY-homologous receiver domain AB890_12995 SM00465 GIY-YIG type nucleases (URI domain) AB890_13025 SM00507 HNH nucleases AB890_13030 SM00861 Transketolase, pyrimidine binding domain AB890_13055 SM00849 Metallo-beta-lactamase superfamily AB890_13140 SM00422 helix_turn_helix, mercury resistance AB890_13145 SM00411 bacterial (prokaryotic) histone like domain AB890_13150 SM00873 B3/4 domain AB890_13150 SM00874 tRNA synthetase B5 domain AB890_13150 SM00896 Ferredoxin-fold anticodon binding domain AB890_13175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB890_13180 SM00354 helix_turn _helix lactose operon repressor AB890_13185 SM00642 Alpha-amylase domain AB890_13215 SM00642 Alpha-amylase domain AB890_13265 SM00382 ATPases associated with a variety of cellular activities AB890_13325 SM00487 DEAD-like helicases superfamily AB890_13325 SM00490 helicase superfamily c-terminal domain AB890_13570 SM01001 AIR carboxylase AB890_13590 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_13590 SM00322 K homology RNA-binding domain AB890_13595 SM01387 AB890_13595 AB890_13615 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_13615 SM00322 K homology RNA-binding domain AB890_13665 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB890_13670 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB890_13715 SM00822 AB890_13715 AB890_13730 SM00052 Putative diguanylate phosphodiesterase AB890_13730 SM00267 diguanylate cyclase AB890_13730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_13805 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB890_13835 SM00257 Lysin motif AB890_13865 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_13930 SM01160 AB890_13930 AB890_13985 SM00098 Alkaline phosphatase homologues AB890_13990 SM00977 TilS substrate C-terminal domain AB890_14005 SM01351 AB890_14005 AB890_14040 SM00316 Ribosomal protein S1-like RNA-binding domain AB890_14175 SM00382 ATPases associated with a variety of cellular activities AB890_14205 SM00448 cheY-homologous receiver domain AB890_14205 SM00862 Transcriptional regulatory protein, C terminal AB890_14210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_14210 SM00387 Histidine kinase-like ATPases AB890_14210 SM00388 His Kinase A (phosphoacceptor) domain AB890_14245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_14245 SM00267 diguanylate cyclase AB890_14250 SM00363 S4 RNA-binding domain AB890_14255 SM00052 Putative diguanylate phosphodiesterase AB890_14255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_14255 SM00091 PAS domain AB890_14255 SM00267 diguanylate cyclase AB890_14260 SM00487 DEAD-like helicases superfamily AB890_14260 SM00490 helicase superfamily c-terminal domain AB890_14305 SM00342 helix_turn_helix, arabinose operon control protein AB890_14305 SM00478 endonuclease III AB890_14305 SM01009 AlkA N-terminal domain AB890_14325 SM00829 Enoylreductase AB890_14390 SM00342 helix_turn_helix, arabinose operon control protein AB890_14460 SM00645 Papain family cysteine protease AB890_14465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_14465 SM00387 Histidine kinase-like ATPases AB890_14465 SM00388 His Kinase A (phosphoacceptor) domain AB890_14470 SM00448 cheY-homologous receiver domain AB890_14470 SM00862 Transcriptional regulatory protein, C terminal AB890_14485 SM00487 DEAD-like helicases superfamily AB890_14485 SM00490 helicase superfamily c-terminal domain AB890_14485 SM00982 AB890_14485 AB890_14485 SM01058 CarD-like/TRCF domain AB890_14520 SM00073 Histidine Phosphotransfer domain AB890_14520 SM00260 Two component signalling adaptor domain AB890_14520 SM00387 Histidine kinase-like ATPases AB890_14520 SM01231 AB890_14520 AB890_14525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_14525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_14530 SM00260 Two component signalling adaptor domain AB890_14535 SM00052 Putative diguanylate phosphodiesterase AB890_14535 SM00448 cheY-homologous receiver domain AB890_14540 SM00138 Methyltransferase, chemotaxis proteins AB890_14545 SM00448 cheY-homologous receiver domain AB890_14550 SM00155 Phospholipase D. Active site motifs. AB890_14565 SM00855 Phosphoglycerate mutase family AB890_14615 SM00248 ankyrin repeats AB890_14660 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB890_14665 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB890_14675 SM00829 Enoylreductase AB890_14680 SM00267 diguanylate cyclase AB890_14745 SM00732 Likely ribonuclease with RNase H fold. AB890_14785 SM00382 ATPases associated with a variety of cellular activities AB890_14800 SM00411 bacterial (prokaryotic) histone like domain AB890_14830 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AB890_14845 SM00382 ATPases associated with a variety of cellular activities AB890_14875 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB890_14880 SM00671 Sel1-like repeats. AB890_14910 SM00054 EF-hand, calcium binding motif AB890_15000 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_15020 SM00382 ATPases associated with a variety of cellular activities AB890_15065 SM00924 MgtE intracellular N domain AB890_15095 SM00656 AB890_15095 AB890_15110 SM00421 helix_turn_helix, Lux Regulon AB890_15135 SM00849 Metallo-beta-lactamase superfamily AB890_15145 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB890_15165 SM00422 helix_turn_helix, mercury resistance AB890_15305 SM00342 helix_turn_helix, arabinose operon control protein AB890_15315 SM00387 Histidine kinase-like ATPases AB890_15315 SM00388 His Kinase A (phosphoacceptor) domain AB890_15315 SM00448 cheY-homologous receiver domain AB890_15320 SM00387 Histidine kinase-like ATPases AB890_15320 SM00388 His Kinase A (phosphoacceptor) domain AB890_15320 SM00448 cheY-homologous receiver domain AB890_15330 SM00387 Histidine kinase-like ATPases AB890_15330 SM00388 His Kinase A (phosphoacceptor) domain AB890_15330 SM00448 cheY-homologous receiver domain AB890_15335 SM00867 YceI-like domain AB890_15345 SM00867 YceI-like domain AB890_15400 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_15430 SM00028 Tetratricopeptide repeats AB890_15530 SM00812 Alpha-L-fucosidase AB890_15535 SM00636 AB890_15535 AB890_15550 SM00758 AB890_15550 AB890_15550 SM01217 AB890_15550 AB890_15580 SM01149 AB890_15580 AB890_15640 SM00260 Two component signalling adaptor domain AB890_15650 SM00073 Histidine Phosphotransfer domain AB890_15650 SM00260 Two component signalling adaptor domain AB890_15650 SM00387 Histidine kinase-like ATPases AB890_15650 SM00448 cheY-homologous receiver domain AB890_15650 SM01231 AB890_15650 AB890_15655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_15660 SM00260 Two component signalling adaptor domain AB890_15665 SM00448 cheY-homologous receiver domain AB890_15670 SM00448 cheY-homologous receiver domain AB890_15695 SM00491 AB890_15695 AB890_15720 SM00954 Region found in RelA / SpoT proteins AB890_15765 SM00382 ATPases associated with a variety of cellular activities AB890_15765 SM00487 DEAD-like helicases superfamily AB890_15765 SM00490 helicase superfamily c-terminal domain AB890_15765 SM00847 Helicase associated domain (HA2) Add an annotation AB890_15775 SM00341 Helicase and RNase D C-terminal AB890_15775 SM00487 DEAD-like helicases superfamily AB890_15775 SM00490 helicase superfamily c-terminal domain AB890_15775 SM00956 AB890_15775 AB890_15785 SM00448 cheY-homologous receiver domain AB890_15810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_15810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_15825 SM00448 cheY-homologous receiver domain AB890_15830 SM00091 PAS domain AB890_15830 SM00911 HWE histidine kinase AB890_15885 SM00382 ATPases associated with a variety of cellular activities AB890_15900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB890_15935 SM00834 Putative regulatory protein AB890_15975 SM00382 ATPases associated with a variety of cellular activities AB890_16080 SM00855 Phosphoglycerate mutase family AB890_16130 SM00382 ATPases associated with a variety of cellular activities AB890_16130 SM01086 C-terminal, D2-small domain, of ClpB protein AB890_16135 SM00382 ATPases associated with a variety of cellular activities AB890_16145 SM00062 Bacterial periplasmic substrate-binding proteins AB890_16220 SM00564 beta-propeller repeat AB890_16225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_16325 SM01126 AB890_16325 AB890_16335 SM00881 CoA binding domain AB890_16345 SM00387 Histidine kinase-like ATPases AB890_16345 SM00388 His Kinase A (phosphoacceptor) domain AB890_16350 SM00382 ATPases associated with a variety of cellular activities AB890_16350 SM00448 cheY-homologous receiver domain AB890_16415 SM00387 Histidine kinase-like ATPases AB890_16415 SM00388 His Kinase A (phosphoacceptor) domain AB890_16420 SM00448 cheY-homologous receiver domain AB890_16420 SM00862 Transcriptional regulatory protein, C terminal AB890_16435 SM00642 Alpha-amylase domain AB890_16440 SM00528 Domain in histone-like proteins of HNS family AB890_16450 SM00318 Staphylococcal nuclease homologues AB890_16515 SM00387 Histidine kinase-like ATPases AB890_16515 SM00388 His Kinase A (phosphoacceptor) domain AB890_16520 SM00448 cheY-homologous receiver domain AB890_16535 SM01034 Sensors of blue-light using FAD AB890_16585 SM00530 Helix-turn-helix XRE-family like proteins AB890_16605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_16605 SM00387 Histidine kinase-like ATPases AB890_16630 SM00255 Toll - interleukin 1 - resistance AB890_16645 SM00869 Autotransporter beta-domain AB890_16700 SM00354 helix_turn _helix lactose operon repressor AB890_16730 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB890_16835 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_16835 SM00387 Histidine kinase-like ATPases AB890_16870 SM00506 Appr-1"-p processing enzyme AB890_16910 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB890_16935 SM00849 Metallo-beta-lactamase superfamily AB890_16950 SM00382 ATPases associated with a variety of cellular activities AB890_17020 SM00861 Transketolase, pyrimidine binding domain AB890_17035 SM00028 Tetratricopeptide repeats AB890_17035 SM00327 von Willebrand factor (vWF) type A domain AB890_17040 SM00327 von Willebrand factor (vWF) type A domain AB890_17055 SM00382 ATPases associated with a variety of cellular activities AB890_17060 SM00965 Secretin and TonB N terminus short domain AB890_17110 SM00487 DEAD-like helicases superfamily AB890_17110 SM00490 helicase superfamily c-terminal domain AB890_17120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB890_17120 SM00954 Region found in RelA / SpoT proteins AB890_17125 SM01409 AB890_17125 AB890_17130 SM00072 Guanylate kinase homologues. AB890_17155 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_17180 SM01011 Aminopeptidase P, N-terminal domain AB890_17250 SM00028 Tetratricopeptide repeats AB890_17250 SM00382 ATPases associated with a variety of cellular activities AB890_17250 SM00421 helix_turn_helix, Lux Regulon AB890_17320 SM00464 Found in ATP-dependent protease La (LON) AB890_17370 SM00342 helix_turn_helix, arabinose operon control protein AB890_17375 SM00862 Transcriptional regulatory protein, C terminal AB890_17390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_17420 SM00917 LeuA allosteric (dimerisation) domain AB890_17425 SM01329 AB890_17425 AB890_17445 SM00267 diguanylate cyclase AB890_17495 SM00919 Malic enzyme, NAD binding domain AB890_17495 SM01274 AB890_17495 AB890_17510 SM00387 Histidine kinase-like ATPases AB890_17510 SM00388 His Kinase A (phosphoacceptor) domain AB890_17510 SM00448 cheY-homologous receiver domain AB890_17545 SM00421 helix_turn_helix, Lux Regulon AB890_17545 SM00448 cheY-homologous receiver domain AB890_17555 SM00387 Histidine kinase-like ATPases AB890_17555 SM00388 His Kinase A (phosphoacceptor) domain AB890_17560 SM00448 cheY-homologous receiver domain AB890_17560 SM00862 Transcriptional regulatory protein, C terminal AB890_17575 SM00822 AB890_17575 AB890_17580 SM00354 helix_turn _helix lactose operon repressor AB890_17595 SM00642 Alpha-amylase domain AB890_17605 SM01154 AB890_17605 AB890_17640 SM00450 Rhodanese Homology Domain AB890_17700 SM00028 Tetratricopeptide repeats AB890_17785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB890_17785 SM00866 AB890_17785 AB890_17845 SM00382 ATPases associated with a variety of cellular activities AB890_17875 SM01211 AB890_17875 AB890_17940 SM00656 AB890_17940 AB890_17970 SM00528 Domain in histone-like proteins of HNS family AB890_17985 SM00382 ATPases associated with a variety of cellular activities AB890_18015 SM00882 Coenzyme A transferase AB890_18020 SM00882 Coenzyme A transferase AB890_18035 SM00984 UDP binding domain AB890_18060 SM00893 Electron transfer flavoprotein domain AB890_18065 SM00893 Electron transfer flavoprotein domain AB890_18135 SM00382 ATPases associated with a variety of cellular activities AB890_18150 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_18190 SM00487 DEAD-like helicases superfamily AB890_18190 SM00490 helicase superfamily c-terminal domain AB890_18225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_18260 SM00825 Beta-ketoacyl synthase AB890_18330 SM00382 ATPases associated with a variety of cellular activities AB890_18355 SM00387 Histidine kinase-like ATPases AB890_18370 SM00830 Chorismate mutase type II AB890_18380 SM00382 ATPases associated with a variety of cellular activities AB890_18450 SM00986 Uracil DNA glycosylase superfamily AB890_18450 SM00987 UreE urease accessory protein, C-terminal domain AB890_18490 SM00382 ATPases associated with a variety of cellular activities AB890_18490 SM00930 AB890_18490 AB890_18510 SM00387 Histidine kinase-like ATPases AB890_18510 SM00388 His Kinase A (phosphoacceptor) domain AB890_18510 SM00448 cheY-homologous receiver domain AB890_18565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_18565 SM00091 PAS domain AB890_18565 SM00387 Histidine kinase-like ATPases AB890_18565 SM00388 His Kinase A (phosphoacceptor) domain AB890_18565 SM00448 cheY-homologous receiver domain AB890_18585 SM01005 Alanine racemase, C-terminal domain AB890_18595 SM00344 helix_turn_helix ASNC type AB890_18650 SM00382 ATPases associated with a variety of cellular activities AB890_18660 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AB890_18665 SM00986 Uracil DNA glycosylase superfamily AB890_18665 SM00987 UreE urease accessory protein, C-terminal domain AB890_18670 SM00729 Elongator protein 3, MiaB family, Radical SAM AB890_18735 SM00448 cheY-homologous receiver domain AB890_18735 SM00850 LytTr DNA-binding domain AB890_18740 SM00387 Histidine kinase-like ATPases AB890_18780 SM00091 PAS domain AB890_18780 SM00138 Methyltransferase, chemotaxis proteins AB890_18780 SM00911 HWE histidine kinase AB890_18785 SM00448 cheY-homologous receiver domain AB890_18795 SM00382 ATPases associated with a variety of cellular activities AB890_18795 SM00448 cheY-homologous receiver domain AB890_18855 SM00382 ATPases associated with a variety of cellular activities AB890_18930 SM00382 ATPases associated with a variety of cellular activities AB890_18935 SM00631 AB890_18935 AB890_18975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB890_18975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_18980 SM00477 DNA/RNA non-specific endonuclease AB890_18980 SM00892 DNA/RNA non-specific endonuclease AB890_19130 SM00257 Lysin motif AB890_19155 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB890_19155 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB890_19155 SM00493 AB890_19155 AB890_19210 SM00487 DEAD-like helicases superfamily AB890_19210 SM00490 helicase superfamily c-terminal domain AB890_19245 SM00986 Uracil DNA glycosylase superfamily AB890_19245 SM00987 UreE urease accessory protein, C-terminal domain AB890_19250 SM00448 cheY-homologous receiver domain AB890_19260 SM00382 ATPases associated with a variety of cellular activities AB890_19265 SM00487 DEAD-like helicases superfamily AB890_19265 SM00490 helicase superfamily c-terminal domain AB890_19275 SM00357 Cold shock protein domain AB890_19275 SM00382 ATPases associated with a variety of cellular activities AB890_19275 SM00959 Rho termination factor, N-terminal domain AB890_19305 SM00487 DEAD-like helicases superfamily AB890_19345 SM00257 Lysin motif AB890_19375 SM01150 AB890_19375 AB890_19420 SM00644 AB890_19420 AB890_19430 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB890_19465 SM01217 AB890_19465 AB890_19470 SM00905 Dihydroneopterin aldolase AB890_19495 SM00400 zinc finger AB890_19495 SM00493 AB890_19495 AB890_19495 SM00766 DNA primase DnaG DnaB-binding AB890_19595 SM00363 S4 RNA-binding domain AB890_19640 SM00470 ParB-like nuclease domain AB890_19660 SM01259 AB890_19660 AB890_19690 SM00836 DALR anticodon binding domain AB890_19690 SM01016 Arginyl tRNA synthetase N terminal dom AB890_19720 SM00823 Phosphopantetheine attachment site AB890_19720 SM00824 Thioesterase AB890_19765 SM00938 Nitrogen regulatory protein P-II AB890_19775 SM00382 ATPases associated with a variety of cellular activities AB890_19790 SM00052 Putative diguanylate phosphodiesterase AB890_19820 SM00244 prohibitin homologues AB890_19870 SM00448 cheY-homologous receiver domain AB890_19870 SM00862 Transcriptional regulatory protein, C terminal AB890_19875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB890_19875 SM00387 Histidine kinase-like ATPases AB890_19875 SM00388 His Kinase A (phosphoacceptor) domain AB890_19895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB890_19940 SM01060 AB890_19940 AB890_19955 SM00421 helix_turn_helix, Lux Regulon AB890_19955 SM00448 cheY-homologous receiver domain AB890_19970 SM00382 ATPases associated with a variety of cellular activities AB890_20010 SM00849 Metallo-beta-lactamase superfamily AB890_20040 SM00960 Roadblock/LC7 domain AB890_20105 SM00387 Histidine kinase-like ATPases AB890_20105 SM00388 His Kinase A (phosphoacceptor) domain AB890_20110 SM00448 cheY-homologous receiver domain AB890_20110 SM00862 Transcriptional regulatory protein, C terminal AB890_20135 SM00248 ankyrin repeats AB890_20145 SM00491 AB890_20145 AB890_20175 SM00477 DNA/RNA non-specific endonuclease AB890_20175 SM00892 DNA/RNA non-specific endonuclease AB890_20190 SM01004 Delta-aminolevulinic acid dehydratase AB890_20240 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB890_20260 SM00382 ATPases associated with a variety of cellular activities AB890_20270 SM00530 Helix-turn-helix XRE-family like proteins AB890_20310 SM00342 helix_turn_helix, arabinose operon control protein AB890_20320 SM00382 ATPases associated with a variety of cellular activities AB890_20380 SM00881 CoA binding domain AB890_20385 SM00116 Domain in cystathionine beta-synthase and other proteins. AB890_20385 SM00924 MgtE intracellular N domain AB890_20390 SM01057 Eukaryotic-type carbonic anhydrase AB890_20415 SM00248 ankyrin repeats AB890_20425 SM00825 Beta-ketoacyl synthase AB890_20450 SM00822 AB890_20450 AB890_20495 SM00563 Phosphate acyltransferases AB890_20550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB890_20550 SM00474 3'-5' exonuclease AB890_20550 SM00475 5'-3' exonuclease AB890_20550 SM00482 DNA polymerase A domain AB890_20565 SM00912 haemagglutination activity domain AB890_20585 SM00331 Sigma factor PP2C-like phosphatases AB890_20585 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB890_20610 SM00240 Forkhead associated domain AB890_20625 SM00028 Tetratricopeptide repeats AB890_20635 SM00220 Serine/Threonine protein kinases, catalytic domain AB890_20655 SM00965 Secretin and TonB N terminus short domain AB890_20665 SM00915 Jacalin-like lectin domain AB890_20730 SM00342 helix_turn_helix, arabinose operon control protein AB890_20740 SM01266 AB890_20740 AB890_20760 SM00155 Phospholipase D. Active site motifs. AB890_20900 SM00421 helix_turn_helix, Lux Regulon AB890_20900 SM00448 cheY-homologous receiver domain AB890_20955 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB890_20975 SM00346 helix_turn_helix isocitrate lyase regulation AB890_20985 SM00091 PAS domain AB890_20985 SM00387 Histidine kinase-like ATPases AB890_20985 SM00388 His Kinase A (phosphoacceptor) domain AB890_20985 SM00448 cheY-homologous receiver domain AB890_21015 SM00564 beta-propeller repeat AB890_21075 SM00836 DALR anticodon binding domain AB890_21085 SM00382 ATPases associated with a variety of cellular activities AB890_21160 SM00354 helix_turn _helix lactose operon repressor AB890_21175 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB890_21185 SM00758 AB890_21185 AB890_21185 SM01217 AB890_21185 AB890_21210 SM00612 AB890_21210 AB890_21240 SM01007 Class II Aldolase and Adducin N-terminal domain AB890_21275 SM00633 Glycosyl hydrolase family 10 AB890_21290 SM00633 Glycosyl hydrolase family 10 AB890_21305 SM00633 Glycosyl hydrolase family 10 AB890_21365 SM00829 Enoylreductase AB890_21370 SM00563 Phosphate acyltransferases AB890_21380 SM00354 helix_turn _helix lactose operon repressor AB890_21405 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB890_21440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_21440 SM00388 His Kinase A (phosphoacceptor) domain AB890_21455 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB890_21455 SM01232 AB890_21455 AB890_21490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_21490 SM00091 PAS domain AB890_21545 SM00347 helix_turn_helix multiple antibiotic resistance protein AB890_21580 SM00155 Phospholipase D. Active site motifs. AB890_21665 SM00796 Allophanate hydrolase subunit 1 AB890_21665 SM00797 Allophanate hydrolase subunit 2 AB890_21665 SM00878 Biotin carboxylase C-terminal domain AB890_21725 SM00382 ATPases associated with a variety of cellular activities AB890_21775 SM00829 Enoylreductase AB890_21815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB890_21815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB890_21815 SM00091 PAS domain AB890_21815 SM00267 diguanylate cyclase AB890_21845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB890_21870 SM00014 Acid phosphatase homologues AB890_21880 SM00028 Tetratricopeptide repeats AB890_21945 SM00528 Domain in histone-like proteins of HNS family AB890_p0240 SM00470 ParB-like nuclease domain AB890_p0275 SM00857 Resolvase, N terminal domain AB890_p0295 SM00670 Large family of predicted nucleotide-binding domains AB890_p0305 SM00857 Resolvase, N terminal domain AB890_p0340 SM00966 SpoVT / AbrB like domain AB890_p0430 SM00857 Resolvase, N terminal domain AB890_p0450 SM00670 Large family of predicted nucleotide-binding domains AB890_p0460 SM00857 Resolvase, N terminal domain