locus-tag class description J156_00004 PF01527 Transposase J156_00006 PF00239 Resolvase, N terminal domain J156_00006 PF02796 Helix-turn-helix domain of resolvase J156_00019 PF07015 VirC1 protein J156_00023 PF03377 TAL effector repeat J156_00027 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J156_00029 PF00239 Resolvase, N terminal domain J156_00029 PF02796 Helix-turn-helix domain of resolvase J156_00034 PF01526 Tn3 transposase DDE domain J156_00034 PF13700 Domain of unknown function (DUF4158) J156_00037 PF02796 Helix-turn-helix domain of resolvase J156_00037 PF00239 Resolvase, N terminal domain J156_00038 PF03377 TAL effector repeat J156_00042 PF13614 AAA domain J156_00050 PF13406 Transglycosylase SLT domain J156_00051 PF13700 Domain of unknown function (DUF4158) J156_00051 PF01526 Tn3 transposase DDE domain J156_00056 PF01527 Transposase J156_00057 PF03377 TAL effector repeat J156_00061 PF07015 VirC1 protein J156_00074 PF08751 TrwC relaxase J156_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J156_00074 PF07057 DNA helicase TraI J156_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J156_00074 PF08751 TrwC relaxase J156_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J156_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J156_00074 PF07057 DNA helicase TraI J156_00079 PF01464 Transglycosylase SLT domain J156_00080 PF00437 Type II/IV secretion system protein J156_00081 PF03743 Bacterial conjugation TrbI-like protein J156_00082 PF03524 Conjugal transfer protein J156_00094 PF01527 Transposase J156_00097 PF06613 KorB C-terminal beta-barrel domain J156_00097 PF08535 KorB domain J156_00097 PF02195 ParB-like nuclease domain J156_00098 PF13614 AAA domain J156_00103 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J156_00104 PF02796 Helix-turn-helix domain of resolvase J156_00104 PF00239 Resolvase, N terminal domain J156_00105 PF13276 HTH-like domain J156_00105 PF00665 Integrase core domain J156_00105 PF13333 Integrase core domain J156_00106 PF13333 Integrase core domain J156_00106 PF00665 Integrase core domain J156_00106 PF13276 HTH-like domain J156_00107 PF03377 TAL effector repeat J156_00108 PF01526 Tn3 transposase DDE domain J156_00108 PF13700 Domain of unknown function (DUF4158) J156_00111 PF00239 Resolvase, N terminal domain J156_00111 PF02796 Helix-turn-helix domain of resolvase J156_00112 PF11638 DnaA N-terminal domain J156_00112 PF08299 Bacterial dnaA protein helix-turn-helix J156_00112 PF00308 Bacterial dnaA protein J156_00113 PF02767 DNA polymerase III beta subunit, central domain J156_00113 PF02768 DNA polymerase III beta subunit, C-terminal domain J156_00113 PF00712 DNA polymerase III beta subunit, N-terminal domain J156_00114 PF02463 RecF/RecN/SMC N terminal domain J156_00116 PF01751 Toprim domain J156_00116 PF00204 DNA gyrase B J156_00116 PF00986 DNA gyrase B subunit, carboxyl terminus J156_00116 PF18053 DNA gyrase B subunit insert domain J156_00116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00118 PF01435 Peptidase family M48 J156_00120 PF03544 Gram-negative bacterial TonB protein C-terminal J156_00121 PF01618 MotA/TolQ/ExbB proton channel family J156_00122 PF02472 Biopolymer transport protein ExbD/TolR J156_00123 PF02472 Biopolymer transport protein ExbD/TolR J156_00124 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J156_00126 PF13091 PLD-like domain J156_00126 PF13396 Phospholipase_D-nuclease N-terminal J156_00129 PF04055 Radical SAM superfamily J156_00131 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J156_00134 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J156_00134 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J156_00135 PF03572 Peptidase family S41 J156_00135 PF13180 PDZ domain J156_00136 PF01551 Peptidase family M23 J156_00138 PF04389 Peptidase family M28 J156_00140 PF00150 Cellulase (glycosyl hydrolase family 5) J156_00141 PF00150 Cellulase (glycosyl hydrolase family 5) J156_00142 PF00150 Cellulase (glycosyl hydrolase family 5) J156_00143 PF08240 Alcohol dehydrogenase GroES-like domain J156_00143 PF00107 Zinc-binding dehydrogenase J156_00144 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J156_00144 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_00145 PF04898 Glutamate synthase central domain J156_00145 PF01645 Conserved region in glutamate synthase J156_00145 PF01493 GXGXG motif J156_00145 PF00310 Glutamine amidotransferases class-II J156_00149 PF01804 Penicillin amidase J156_00151 PF03466 LysR substrate binding domain J156_00151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00154 PF02397 Bacterial sugar transferase J156_00155 PF02350 UDP-N-acetylglucosamine 2-epimerase J156_00157 PF03808 Glycosyl transferase WecB/TagA/CpsF family J156_00158 PF13439 Glycosyltransferase Family 4 J156_00158 PF00534 Glycosyl transferases group 1 J156_00162 PF13537 Glutamine amidotransferase domain J156_00162 PF00733 Asparagine synthase J156_00165 PF16363 GDP-mannose 4,6 dehydratase J156_00168 PF00005 ABC transporter J156_00168 PF00664 ABC transporter transmembrane region J156_00170 PF00733 Asparagine synthase J156_00170 PF13537 Glutamine amidotransferase domain J156_00175 PF00685 Sulfotransferase domain J156_00192 PF00271 Helicase conserved C-terminal domain J156_00192 PF09369 Domain of unknown function (DUF1998) J156_00192 PF00270 DEAD/DEAH box helicase J156_00193 PF03006 Haemolysin-III related J156_00196 PF00106 short chain dehydrogenase J156_00198 PF03466 LysR substrate binding domain J156_00198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00202 PF02525 Flavodoxin-like fold J156_00204 PF01527 Transposase J156_00205 PF13333 Integrase core domain J156_00205 PF00665 Integrase core domain J156_00205 PF13276 HTH-like domain J156_00213 PF05532 CsbD-like J156_00217 PF01447 Thermolysin metallopeptidase, catalytic domain J156_00217 PF02868 Thermolysin metallopeptidase, alpha-helical domain J156_00217 PF16485 Protealysin propeptide J156_00219 PF00293 NUDIX domain J156_00219 PF13344 Haloacid dehalogenase-like hydrolase J156_00222 PF00085 Thioredoxin J156_00223 PF08946 Osmosensory transporter coiled coil J156_00223 PF00083 Sugar (and other) transporter J156_00231 PF17863 AAA lid domain J156_00231 PF07726 ATPase family associated with various cellular activities (AAA) J156_00237 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J156_00238 PF00155 Aminotransferase class I and II J156_00239 PF07715 TonB-dependent Receptor Plug Domain J156_00239 PF00593 TonB dependent receptor J156_00241 PF07883 Cupin domain J156_00242 PF00171 Aldehyde dehydrogenase family J156_00246 PF02735 Ku70/Ku80 beta-barrel domain J156_00247 PF01070 FMN-dependent dehydrogenase J156_00248 PF00144 Beta-lactamase J156_00249 PF07730 Histidine kinase J156_00250 PF00196 Bacterial regulatory proteins, luxR family J156_00250 PF00072 Response regulator receiver domain J156_00254 PF00486 Transcriptional regulatory protein, C terminal J156_00254 PF18500 CadC C-terminal domain 1 J156_00255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J156_00255 PF07055 Enoyl reductase FAD binding domain J156_00255 PF12241 Trans-2-enoyl-CoA reductase catalytic region J156_00257 PF00294 pfkB family carbohydrate kinase J156_00268 PF01527 Transposase J156_00269 PF13276 HTH-like domain J156_00269 PF13333 Integrase core domain J156_00269 PF00665 Integrase core domain J156_00270 PF00128 Alpha amylase, catalytic domain J156_00270 PF11896 Domain of unknown function (DUF3416) J156_00271 PF16657 Maltogenic Amylase, C-terminal domain J156_00271 PF00128 Alpha amylase, catalytic domain J156_00272 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J156_00272 PF02806 Alpha amylase, C-terminal all-beta domain J156_00272 PF00128 Alpha amylase, catalytic domain J156_00274 PF00248 Aldo/keto reductase family J156_00275 PF00135 Carboxylesterase family J156_00276 PF13472 GDSL-like Lipase/Acylhydrolase family J156_00276 PF07859 alpha/beta hydrolase fold J156_00278 PF03480 Bacterial extracellular solute-binding protein, family 7 J156_00280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J156_00281 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J156_00281 PF04616 Glycosyl hydrolases family 43 J156_00282 PF00356 Bacterial regulatory proteins, lacI family J156_00283 PF04962 KduI/IolB family J156_00286 PF00657 GDSL-like Lipase/Acylhydrolase J156_00289 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J156_00290 PF01037 Lrp/AsnC ligand binding domain J156_00291 PF00593 TonB dependent receptor J156_00291 PF07715 TonB-dependent Receptor Plug Domain J156_00291 PF07660 Secretin and TonB N terminus short domain J156_00292 PF01734 Patatin-like phospholipase J156_00294 PF00005 ABC transporter J156_00297 PF00005 ABC transporter J156_00298 PF00528 Binding-protein-dependent transport system inner membrane component J156_00300 PF03781 Sulfatase-modifying factor enzyme 1 J156_00300 PF12867 DinB superfamily J156_00303 PF01381 Helix-turn-helix J156_00307 PF10609 NUBPL iron-transfer P-loop NTPase J156_00307 PF01883 Iron-sulfur cluster assembly protein J156_00310 PF13091 PLD-like domain J156_00311 PF03061 Thioesterase superfamily J156_00317 PF08240 Alcohol dehydrogenase GroES-like domain J156_00317 PF00107 Zinc-binding dehydrogenase J156_00319 PF02673 Bacitracin resistance protein BacA J156_00320 PF00120 Glutamine synthetase, catalytic domain J156_00320 PF03951 Glutamine synthetase, beta-Grasp domain J156_00321 PF00543 Nitrogen regulatory protein P-II J156_00322 PF00909 Ammonium Transporter Family J156_00323 PF00989 PAS fold J156_00323 PF00512 His Kinase A (phospho-acceptor) domain J156_00323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00324 PF00158 Sigma-54 interaction domain J156_00324 PF02954 Bacterial regulatory protein, Fis family J156_00324 PF00072 Response regulator receiver domain J156_00325 PF00080 Copper/zinc superoxide dismutase (SODC) J156_00326 PF00080 Copper/zinc superoxide dismutase (SODC) J156_00327 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J156_00329 PF00108 Thiolase, N-terminal domain J156_00329 PF02803 Thiolase, C-terminal domain J156_00336 PF00581 Rhodanese-like domain J156_00337 PF02556 Preprotein translocase subunit SecB J156_00338 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J156_00338 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J156_00340 PF00205 Thiamine pyrophosphate enzyme, central domain J156_00340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J156_00340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J156_00341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00342 PF02954 Bacterial regulatory protein, Fis family J156_00342 PF00072 Response regulator receiver domain J156_00342 PF00158 Sigma-54 interaction domain J156_00345 PF07690 Major Facilitator Superfamily J156_00346 PF00588 SpoU rRNA Methylase family J156_00349 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J156_00349 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J156_00350 PF02661 Fic/DOC family J156_00350 PF13784 Fic/DOC family N-terminal J156_00351 PF00561 alpha/beta hydrolase fold J156_00352 PF03692 Putative zinc- or iron-chelating domain J156_00353 PF00501 AMP-binding enzyme J156_00355 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J156_00357 PF07478 D-ala D-ala ligase C-terminus J156_00357 PF01820 D-ala D-ala ligase N-terminus J156_00359 PF03109 ABC1 family J156_00361 PF00849 RNA pseudouridylate synthase J156_00363 PF00472 RF-1 domain J156_00365 PF01112 Asparaginase J156_00366 PF01432 Peptidase family M3 J156_00367 PF12706 Beta-lactamase superfamily domain J156_00370 PF12833 Helix-turn-helix domain J156_00371 PF00999 Sodium/hydrogen exchanger family J156_00372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00372 PF03466 LysR substrate binding domain J156_00373 PF01274 Malate synthase J156_00374 PF00463 Isocitrate lyase family J156_00375 PF00990 Diguanylate cyclase, GGDEF domain J156_00379 PF00326 Prolyl oligopeptidase family J156_00380 PF00364 Biotin-requiring enzyme J156_00380 PF00289 Biotin carboxylase, N-terminal domain J156_00380 PF02785 Biotin carboxylase C-terminal domain J156_00380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J156_00381 PF01039 Carboxyl transferase domain J156_00382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_00382 PF02770 Acyl-CoA dehydrogenase, middle domain J156_00382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_00393 PF07683 Cobalamin synthesis protein cobW C-terminal domain J156_00393 PF02492 CobW/HypB/UreG, nucleotide-binding domain J156_00397 PF03969 AFG1-like ATPase J156_00398 PF01047 MarR family J156_00399 PF02566 OsmC-like protein J156_00404 PF16884 N-terminal domain of oxidoreductase J156_00404 PF00107 Zinc-binding dehydrogenase J156_00407 PF00849 RNA pseudouridylate synthase J156_00408 PF00593 TonB dependent receptor J156_00410 PF08482 ATP-dependent helicase C-terminal J156_00410 PF00271 Helicase conserved C-terminal domain J156_00410 PF00270 DEAD/DEAH box helicase J156_00410 PF04408 Helicase associated domain (HA2) J156_00411 PF07308 Protein of unknown function (DUF1456) J156_00412 PF00576 HIUase/Transthyretin family J156_00413 PF13454 FAD-NAD(P)-binding J156_00414 PF01014 Uricase J156_00414 PF09349 OHCU decarboxylase J156_00417 PF00266 Aminotransferase class-V J156_00418 PF07687 Peptidase dimerisation domain J156_00418 PF01546 Peptidase family M20/M25/M40 J156_00419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00419 PF03466 LysR substrate binding domain J156_00420 PF07690 Major Facilitator Superfamily J156_00423 PF01425 Amidase J156_00424 PF01156 Inosine-uridine preferring nucleoside hydrolase J156_00426 PF00860 Permease family J156_00427 PF00111 2Fe-2S iron-sulfur cluster binding domain J156_00428 PF00355 Rieske [2Fe-2S] domain J156_00429 PF03466 LysR substrate binding domain J156_00429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00430 PF01026 TatD related DNase J156_00433 PF03466 LysR substrate binding domain J156_00433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00434 PF07690 Major Facilitator Superfamily J156_00437 PF02146 Sir2 family J156_00438 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J156_00439 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J156_00439 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J156_00441 PF00551 Formyl transferase J156_00442 PF00486 Transcriptional regulatory protein, C terminal J156_00442 PF00072 Response regulator receiver domain J156_00443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00443 PF00672 HAMP domain J156_00443 PF00512 His Kinase A (phospho-acceptor) domain J156_00444 PF00529 HlyD membrane-fusion protein of T1SS J156_00444 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_00445 PF00873 AcrB/AcrD/AcrF family J156_00446 PF02321 Outer membrane efflux protein J156_00448 PF02219 Methylenetetrahydrofolate reductase J156_00449 PF02677 Epoxyqueuosine reductase QueH J156_00450 PF03466 LysR substrate binding domain J156_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00451 PF03358 NADPH-dependent FMN reductase J156_00453 PF01717 Cobalamin-independent synthase, Catalytic domain J156_00453 PF08267 Cobalamin-independent synthase, N-terminal domain J156_00454 PF03812 2-keto-3-deoxygluconate permease J156_00456 PF05368 NmrA-like family J156_00457 PF01638 HxlR-like helix-turn-helix J156_00461 PF13333 Integrase core domain J156_00461 PF00665 Integrase core domain J156_00461 PF13276 HTH-like domain J156_00462 PF01527 Transposase J156_00463 PF00589 Phage integrase family J156_00463 PF13495 Phage integrase, N-terminal SAM-like domain J156_00464 PF00920 Dehydratase family J156_00467 PF00132 Bacterial transferase hexapeptide (six repeats) J156_00468 PF07690 Major Facilitator Superfamily J156_00469 PF11871 Domain of unknown function (DUF3391) J156_00469 PF01966 HD domain J156_00473 PF00171 Aldehyde dehydrogenase family J156_00475 PF01494 FAD binding domain J156_00478 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J156_00478 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J156_00479 PF00230 Major intrinsic protein J156_00480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J156_00480 PF01266 FAD dependent oxidoreductase J156_00481 PF08220 DeoR-like helix-turn-helix domain J156_00481 PF00455 DeoR C terminal sensor domain J156_00483 PF00355 Rieske [2Fe-2S] domain J156_00484 PF01144 Coenzyme A transferase J156_00485 PF01144 Coenzyme A transferase J156_00486 PF02803 Thiolase, C-terminal domain J156_00486 PF00108 Thiolase, N-terminal domain J156_00487 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J156_00487 PF00775 Dioxygenase J156_00489 PF00206 Lyase J156_00489 PF10397 Adenylosuccinate lyase C-terminus J156_00490 PF12146 Serine aminopeptidase, S33 J156_00491 PF02627 Carboxymuconolactone decarboxylase family J156_00493 PF01614 Bacterial transcriptional regulator J156_00493 PF09339 IclR helix-turn-helix domain J156_00495 PF07859 alpha/beta hydrolase fold J156_00496 PF10677 Protein of unknown function (DUF2490) J156_00497 PF13932 GidA associated domain J156_00497 PF01134 Glucose inhibited division protein A J156_00499 PF00291 Pyridoxal-phosphate dependent enzyme J156_00503 PF13649 Methyltransferase domain J156_00505 PF12697 Alpha/beta hydrolase family J156_00507 PF00155 Aminotransferase class I and II J156_00508 PF06968 Biotin and Thiamin Synthesis associated domain J156_00508 PF04055 Radical SAM superfamily J156_00510 PF01040 UbiA prenyltransferase family J156_00514 PF05819 NolX protein J156_00522 PF01313 Bacterial export proteins, family 3 J156_00523 PF00813 FliP family J156_00526 PF00771 FHIPEP family J156_00527 PF01312 FlhB HrpN YscU SpaS Family J156_00530 PF01514 Secretory protein of YscJ/FliF family J156_00533 PF02874 ATP synthase alpha/beta family, beta-barrel domain J156_00533 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J156_00533 PF18269 T3SS EscN ATPase C-terminal domain J156_00535 PF01311 Bacterial export proteins, family 1 J156_00538 PF01464 Transglycosylase SLT domain J156_00541 PF12794 Mechanosensitive ion channel inner membrane domain 1 J156_00541 PF12795 Mechanosensitive ion channel porin domain J156_00541 PF00924 Mechanosensitive ion channel J156_00542 PF00884 Sulfatase J156_00543 PF03109 ABC1 family J156_00544 PF05661 Protein of unknown function (DUF808) J156_00545 PF00990 Diguanylate cyclase, GGDEF domain J156_00545 PF00072 Response regulator receiver domain J156_00546 PF00534 Glycosyl transferases group 1 J156_00546 PF08323 Starch synthase catalytic domain J156_00547 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J156_00547 PF00128 Alpha amylase, catalytic domain J156_00547 PF02806 Alpha amylase, C-terminal all-beta domain J156_00548 PF00128 Alpha amylase, catalytic domain J156_00548 PF11941 Domain of unknown function (DUF3459) J156_00548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J156_00549 PF02446 4-alpha-glucanotransferase J156_00550 PF00128 Alpha amylase, catalytic domain J156_00552 PF00128 Alpha amylase, catalytic domain J156_00552 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J156_00553 PF13460 NAD(P)H-binding J156_00556 PF06903 VirK protein J156_00557 PF02321 Outer membrane efflux protein J156_00560 PF00873 AcrB/AcrD/AcrF family J156_00563 PF00271 Helicase conserved C-terminal domain J156_00563 PF00270 DEAD/DEAH box helicase J156_00565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J156_00565 PF00364 Biotin-requiring enzyme J156_00565 PF02817 e3 binding domain J156_00567 PF02780 Transketolase, C-terminal domain J156_00567 PF02779 Transketolase, pyrimidine binding domain J156_00568 PF00676 Dehydrogenase E1 component J156_00570 PF03301 Tryptophan 2,3-dioxygenase J156_00571 PF00854 POT family J156_00573 PF01047 MarR family J156_00574 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J156_00575 PF04209 homogentisate 1,2-dioxygenase J156_00578 PF03334 Na+/H+ antiporter subunit J156_00579 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J156_00581 PF00361 Proton-conducting membrane transporter J156_00582 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J156_00583 PF00361 Proton-conducting membrane transporter J156_00583 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J156_00583 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J156_00583 PF13244 Domain of unknown function (DUF4040) J156_00586 PF01483 Proprotein convertase P-domain J156_00586 PF01447 Thermolysin metallopeptidase, catalytic domain J156_00586 PF02868 Thermolysin metallopeptidase, alpha-helical domain J156_00586 PF07504 Fungalysin/Thermolysin Propeptide Motif J156_00588 PF00182 Chitinase class I J156_00592 PF01259 SAICAR synthetase J156_00593 PF05099 Tellurite resistance protein TerB J156_00593 PF00226 DnaJ domain J156_00595 PF00834 Ribulose-phosphate 3 epimerase family J156_00596 PF00583 Acetyltransferase (GNAT) family J156_00597 PF00781 Diacylglycerol kinase catalytic domain J156_00598 PF00425 chorismate binding enzyme J156_00598 PF04715 Anthranilate synthase component I, N terminal region J156_00600 PF00117 Glutamine amidotransferase class-I J156_00602 PF00591 Glycosyl transferase family, a/b domain J156_00602 PF02885 Glycosyl transferase family, helical bundle domain J156_00603 PF00218 Indole-3-glycerol phosphate synthase J156_00605 PF00027 Cyclic nucleotide-binding domain J156_00605 PF00325 Bacterial regulatory proteins, crp family J156_00606 PF02675 S-adenosylmethionine decarboxylase J156_00607 PF00893 Small Multidrug Resistance protein J156_00608 PF03232 Ubiquinone biosynthesis protein COQ7 J156_00609 PF00572 Ribosomal protein L13 J156_00610 PF00380 Ribosomal protein S9/S16 J156_00613 PF00293 NUDIX domain J156_00614 PF00210 Ferritin-like domain J156_00615 PF00672 HAMP domain J156_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00615 PF00512 His Kinase A (phospho-acceptor) domain J156_00615 PF01627 Hpt domain J156_00615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J156_00615 PF00072 Response regulator receiver domain J156_00616 PF00072 Response regulator receiver domain J156_00616 PF00486 Transcriptional regulatory protein, C terminal J156_00620 PF01521 Iron-sulphur cluster biosynthesis J156_00623 PF00293 NUDIX domain J156_00623 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J156_00623 PF09297 NADH pyrophosphatase zinc ribbon domain J156_00624 PF03186 CobD/Cbib protein J156_00624 PF17113 Regulatory signalling modulator protein AmpE J156_00627 PF07690 Major Facilitator Superfamily J156_00628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00628 PF03466 LysR substrate binding domain J156_00629 PF07690 Major Facilitator Superfamily J156_00630 PF12805 FUSC-like inner membrane protein yccS J156_00631 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J156_00631 PF02843 Phosphoribosylglycinamide synthetase, C domain J156_00631 PF02844 Phosphoribosylglycinamide synthetase, N domain J156_00633 PF02142 MGS-like domain J156_00633 PF01808 AICARFT/IMPCHase bienzyme J156_00634 PF01066 CDP-alcohol phosphatidyltransferase J156_00635 PF12147 Putative methyltransferase J156_00635 PF12146 Serine aminopeptidase, S33 J156_00636 PF00782 Dual specificity phosphatase, catalytic domain J156_00642 PF02954 Bacterial regulatory protein, Fis family J156_00645 PF01381 Helix-turn-helix J156_00650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J156_00650 PF00289 Biotin carboxylase, N-terminal domain J156_00650 PF02785 Biotin carboxylase C-terminal domain J156_00652 PF00364 Biotin-requiring enzyme J156_00653 PF01220 Dehydroquinase class II J156_00654 PF02683 Cytochrome C biogenesis protein transmembrane region J156_00654 PF11412 Disulphide bond corrector protein DsbC J156_00655 PF03091 CutA1 divalent ion tolerance protein J156_00658 PF01852 START domain J156_00660 PF00106 short chain dehydrogenase J156_00661 PF04231 Endonuclease I J156_00662 PF00166 Chaperonin 10 Kd subunit J156_00663 PF00118 TCP-1/cpn60 chaperonin family J156_00665 PF07715 TonB-dependent Receptor Plug Domain J156_00665 PF00593 TonB dependent receptor J156_00666 PF00793 DAHP synthetase I family J156_00669 PF08450 SMP-30/Gluconolactonase/LRE-like region J156_00671 PF08335 GlnD PII-uridylyltransferase J156_00671 PF03710 Glutamate-ammonia ligase adenylyltransferase J156_00672 PF02592 Putative vitamin uptake transporter J156_00675 PF00881 Nitroreductase family J156_00676 PF04264 YceI-like domain J156_00680 PF16957 Malonate decarboxylase, alpha subunit, transporter J156_00681 PF06857 Malonate decarboxylase delta subunit (MdcD) J156_00682 PF01039 Carboxyl transferase domain J156_00684 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J156_00685 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J156_00687 PF00698 Acyl transferase domain J156_00689 PF07729 FCD domain J156_00689 PF00392 Bacterial regulatory proteins, gntR family J156_00690 PF13419 Haloacid dehalogenase-like hydrolase J156_00696 PF07745 Glycosyl hydrolase family 53 J156_00697 PF00456 Transketolase, thiamine diphosphate binding domain J156_00697 PF17831 Pyruvate dehydrogenase E1 component middle domain J156_00698 PF13333 Integrase core domain J156_00698 PF00665 Integrase core domain J156_00698 PF13276 HTH-like domain J156_00699 PF01527 Transposase J156_00700 PF00106 short chain dehydrogenase J156_00703 PF00106 short chain dehydrogenase J156_00705 PF13409 Glutathione S-transferase, N-terminal domain J156_00710 PF03176 MMPL family J156_00710 PF12823 Domain of unknown function (DUF3817) J156_00711 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J156_00711 PF00326 Prolyl oligopeptidase family J156_00712 PF07759 Protein of unknown function (DUF1615) J156_00713 PF05230 MASE2 domain J156_00713 PF00990 Diguanylate cyclase, GGDEF domain J156_00717 PF00892 EamA-like transporter family J156_00718 PF00497 Bacterial extracellular solute-binding proteins, family 3 J156_00721 PF00324 Amino acid permease J156_00723 PF01544 CorA-like Mg2+ transporter protein J156_00725 PF01204 Trehalase J156_00727 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J156_00727 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J156_00732 PF00563 EAL domain J156_00732 PF00990 Diguanylate cyclase, GGDEF domain J156_00732 PF08447 PAS fold J156_00732 PF08448 PAS fold J156_00733 PF02203 Tar ligand binding domain homologue J156_00733 PF00672 HAMP domain J156_00733 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_00734 PF00150 Cellulase (glycosyl hydrolase family 5) J156_00734 PF00553 Cellulose binding domain J156_00735 PF00916 Sulfate permease family J156_00735 PF01740 STAS domain J156_00736 PF08448 PAS fold J156_00736 PF00990 Diguanylate cyclase, GGDEF domain J156_00739 PF13632 Glycosyl transferase family group 2 J156_00741 PF07694 5TMR of 5TMR-LYT J156_00741 PF06580 Histidine kinase J156_00742 PF04397 LytTr DNA-binding domain J156_00742 PF00072 Response regulator receiver domain J156_00743 PF03900 Porphobilinogen deaminase, C-terminal domain J156_00743 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J156_00748 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J156_00748 PF00326 Prolyl oligopeptidase family J156_00750 PF00155 Aminotransferase class I and II J156_00751 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J156_00751 PF00326 Prolyl oligopeptidase family J156_00752 PF04304 Protein of unknown function (DUF454) J156_00754 PF01678 Diaminopimelate epimerase J156_00756 PF02899 Phage integrase, N-terminal SAM-like domain J156_00756 PF00589 Phage integrase family J156_00757 PF00227 Proteasome subunit J156_00758 PF00004 ATPase family associated with various cellular activities (AAA) J156_00758 PF07724 AAA domain (Cdc48 subfamily) J156_00758 PF10431 C-terminal, D2-small domain, of ClpB protein J156_00760 PF13673 Acetyltransferase (GNAT) domain J156_00761 PF13533 Biotin-lipoyl like J156_00763 PF01209 ubiE/COQ5 methyltransferase family J156_00764 PF03707 Bacterial signalling protein N terminal repeat J156_00764 PF00563 EAL domain J156_00764 PF00990 Diguanylate cyclase, GGDEF domain J156_00765 PF01433 Peptidase family M1 domain J156_00765 PF11838 ERAP1-like C-terminal domain J156_00768 PF13360 PQQ-like domain J156_00769 PF00497 Bacterial extracellular solute-binding proteins, family 3 J156_00772 PF08240 Alcohol dehydrogenase GroES-like domain J156_00772 PF00107 Zinc-binding dehydrogenase J156_00774 PF00158 Sigma-54 interaction domain J156_00774 PF02954 Bacterial regulatory protein, Fis family J156_00774 PF01590 GAF domain J156_00775 PF00294 pfkB family carbohydrate kinase J156_00777 PF04085 rod shape-determining protein MreC J156_00779 PF00905 Penicillin binding protein transpeptidase domain J156_00779 PF03717 Penicillin-binding Protein dimerisation domain J156_00780 PF01098 Cell cycle protein J156_00781 PF00295 Glycosyl hydrolases family 28 J156_00782 PF13406 Transglycosylase SLT domain J156_00783 PF03330 Lytic transglycolase J156_00783 PF05036 Sporulation related domain J156_00784 PF00768 D-alanyl-D-alanine carboxypeptidase J156_00784 PF07943 Penicillin-binding protein 5, C-terminal domain J156_00786 PF04359 Protein of unknown function (DUF493) J156_00787 PF03099 Biotin/lipoate A/B protein ligase family J156_00788 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J156_00788 PF04055 Radical SAM superfamily J156_00789 PF03572 Peptidase family S41 J156_00789 PF00595 PDZ domain J156_00789 PF11818 C-terminal domain of tail specific protease (DUF3340) J156_00789 PF17804 Tail specific protease N-terminal domain J156_00791 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_00791 PF03466 LysR substrate binding domain J156_00793 PF01467 Cytidylyltransferase-like J156_00793 PF00293 NUDIX domain J156_00800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J156_00800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J156_00801 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J156_00801 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J156_00802 PF04972 BON domain J156_00803 PF00512 His Kinase A (phospho-acceptor) domain J156_00803 PF08446 PAS fold J156_00803 PF00360 Phytochrome region J156_00803 PF01590 GAF domain J156_00803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00804 PF00072 Response regulator receiver domain J156_00805 PF00512 His Kinase A (phospho-acceptor) domain J156_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00806 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J156_00815 PF03958 Bacterial type II/III secretion system short domain J156_00815 PF00263 Bacterial type II and III secretion system protein J156_00816 PF00437 Type II/IV secretion system protein J156_00817 PF00482 Type II secretion system (T2SS), protein F J156_00818 PF08334 Type II secretion system (T2SS), protein G J156_00818 PF07963 Prokaryotic N-terminal methylation motif J156_00819 PF12019 Type II transport protein GspH J156_00819 PF07963 Prokaryotic N-terminal methylation motif J156_00821 PF11612 Type II secretion system (T2SS), protein J J156_00821 PF07963 Prokaryotic N-terminal methylation motif J156_00822 PF03934 Type II secretion system (T2SS), protein K J156_00828 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J156_00828 PF02837 Glycosyl hydrolases family 2, sugar binding domain J156_00828 PF16355 Domain of unknown function (DUF4982) J156_00828 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J156_00828 PF00703 Glycosyl hydrolases family 2 J156_00833 PF07690 Major Facilitator Superfamily J156_00834 PF00356 Bacterial regulatory proteins, lacI family J156_00835 PF01380 SIS domain J156_00836 PF01979 Amidohydrolase family J156_00838 PF12627 Probable RNA and SrmB- binding site of polymerase A J156_00838 PF01743 Poly A polymerase head domain J156_00838 PF01966 HD domain J156_00839 PF00732 GMC oxidoreductase J156_00839 PF05199 GMC oxidoreductase J156_00840 PF00171 Aldehyde dehydrogenase family J156_00841 PF02028 BCCT, betaine/carnitine/choline family transporter J156_00843 PF01323 DSBA-like thioredoxin domain J156_00846 PF00034 Cytochrome c J156_00847 PF01926 50S ribosome-binding GTPase J156_00848 PF00753 Metallo-beta-lactamase superfamily J156_00848 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J156_00848 PF10996 Beta-Casp domain J156_00850 PF04107 Glutamate-cysteine ligase family 2(GCS2) J156_00851 PF00672 HAMP domain J156_00851 PF00512 His Kinase A (phospho-acceptor) domain J156_00851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00852 PF00486 Transcriptional regulatory protein, C terminal J156_00852 PF00072 Response regulator receiver domain J156_00855 PF02583 Metal-sensitive transcriptional repressor J156_00856 PF08240 Alcohol dehydrogenase GroES-like domain J156_00856 PF00107 Zinc-binding dehydrogenase J156_00857 PF04828 Glutathione-dependent formaldehyde-activating enzyme J156_00858 PF00756 Putative esterase J156_00859 PF00392 Bacterial regulatory proteins, gntR family J156_00859 PF00155 Aminotransferase class I and II J156_00860 PF02567 Phenazine biosynthesis-like protein J156_00861 PF00892 EamA-like transporter family J156_00863 PF00005 ABC transporter J156_00863 PF12848 ABC transporter J156_00865 PF00464 Serine hydroxymethyltransferase J156_00866 PF03477 ATP cone domain J156_00868 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J156_00868 PF01872 RibD C-terminal domain J156_00871 PF00677 Lumazine binding domain J156_00872 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J156_00872 PF00925 GTP cyclohydrolase II J156_00873 PF00885 6,7-dimethyl-8-ribityllumazine synthase J156_00874 PF01029 NusB family J156_00875 PF00586 AIR synthase related protein, N-terminal domain J156_00875 PF02769 AIR synthase related protein, C-terminal domain J156_00879 PF03814 Potassium-transporting ATPase A subunit J156_00881 PF02669 K+-transporting ATPase, c chain J156_00882 PF13492 GAF domain J156_00882 PF02702 Osmosensitive K+ channel His kinase sensor domain J156_00882 PF13493 Domain of unknown function (DUF4118) J156_00882 PF00512 His Kinase A (phospho-acceptor) domain J156_00882 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00883 PF00072 Response regulator receiver domain J156_00883 PF00486 Transcriptional regulatory protein, C terminal J156_00886 PF01565 FAD binding domain J156_00886 PF02913 FAD linked oxidases, C-terminal domain J156_00887 PF04307 LexA-binding, inner membrane-associated putative hydrolase J156_00888 PF02021 Uncharacterised protein family UPF0102 J156_00890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J156_00895 PF02381 MraZ protein, putative antitoxin-like J156_00896 PF01795 MraW methylase family J156_00897 PF04999 Cell division protein FtsL J156_00898 PF03717 Penicillin-binding Protein dimerisation domain J156_00898 PF00905 Penicillin binding protein transpeptidase domain J156_00899 PF01225 Mur ligase family, catalytic domain J156_00899 PF02875 Mur ligase family, glutamate ligase domain J156_00899 PF08245 Mur ligase middle domain J156_00900 PF01225 Mur ligase family, catalytic domain J156_00900 PF02875 Mur ligase family, glutamate ligase domain J156_00900 PF08245 Mur ligase middle domain J156_00901 PF00953 Glycosyl transferase family 4 J156_00902 PF01098 Cell cycle protein J156_00903 PF03033 Glycosyltransferase family 28 N-terminal domain J156_00903 PF04101 Glycosyltransferase family 28 C-terminal domain J156_00904 PF02875 Mur ligase family, glutamate ligase domain J156_00904 PF08245 Mur ligase middle domain J156_00904 PF01225 Mur ligase family, catalytic domain J156_00905 PF01820 D-ala D-ala ligase N-terminus J156_00905 PF07478 D-ala D-ala ligase C-terminus J156_00906 PF03799 Cell division protein FtsQ J156_00906 PF08478 POTRA domain, FtsQ-type J156_00907 PF02491 SHS2 domain inserted in FTSA J156_00908 PF00091 Tubulin/FtsZ family, GTPase domain J156_00908 PF12327 FtsZ family, C-terminal domain J156_00909 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J156_00911 PF01551 Peptidase family M23 J156_00911 PF08525 Opacity-associated protein A N-terminal motif J156_00911 PF01476 LysM domain J156_00912 PF02810 SEC-C motif J156_00912 PF07517 SecA DEAD-like domain J156_00912 PF01043 SecA preprotein cross-linking domain J156_00912 PF07516 SecA Wing and Scaffold domain J156_00913 PF00293 NUDIX domain J156_00915 PF02219 Methylenetetrahydrofolate reductase J156_00918 PF08240 Alcohol dehydrogenase GroES-like domain J156_00918 PF14765 Polyketide synthase dehydratase J156_00918 PF00698 Acyl transferase domain J156_00918 PF00107 Zinc-binding dehydrogenase J156_00918 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_00918 PF16197 Ketoacyl-synthetase C-terminal extension J156_00918 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_00918 PF08659 KR domain J156_00918 PF00550 Phosphopantetheine attachment site J156_00919 PF09286 Pro-kumamolisin, activation domain J156_00919 PF00082 Subtilase family J156_00921 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J156_00922 PF00128 Alpha amylase, catalytic domain J156_00928 PF13649 Methyltransferase domain J156_00929 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J156_00929 PF05221 S-adenosyl-L-homocysteine hydrolase J156_00932 PF00311 Phosphoenolpyruvate carboxylase J156_00937 PF00328 Histidine phosphatase superfamily (branch 2) J156_00938 PF02773 S-adenosylmethionine synthetase, C-terminal domain J156_00938 PF02772 S-adenosylmethionine synthetase, central domain J156_00938 PF00438 S-adenosylmethionine synthetase, N-terminal domain J156_00940 PF13649 Methyltransferase domain J156_00941 PF01207 Dihydrouridine synthase (Dus) J156_00944 PF00294 pfkB family carbohydrate kinase J156_00945 PF01773 Na+ dependent nucleoside transporter N-terminus J156_00945 PF07662 Na+ dependent nucleoside transporter C-terminus J156_00945 PF07670 Nucleoside recognition J156_00946 PF00248 Aldo/keto reductase family J156_00948 PF00593 TonB dependent receptor J156_00948 PF07715 TonB-dependent Receptor Plug Domain J156_00953 PF00528 Binding-protein-dependent transport system inner membrane component J156_00954 PF00005 ABC transporter J156_00956 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J156_00958 PF00005 ABC transporter J156_00959 PF13472 GDSL-like Lipase/Acylhydrolase family J156_00960 PF00072 Response regulator receiver domain J156_00960 PF00486 Transcriptional regulatory protein, C terminal J156_00961 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_00961 PF08521 Two-component sensor kinase N-terminal J156_00961 PF00512 His Kinase A (phospho-acceptor) domain J156_00963 PF01219 Prokaryotic diacylglycerol kinase J156_00967 PF01790 Prolipoprotein diacylglyceryl transferase J156_00968 PF00303 Thymidylate synthase J156_00970 PF00186 Dihydrofolate reductase J156_00971 PF00158 Sigma-54 interaction domain J156_00972 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_00972 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J156_00973 PF00005 ABC transporter J156_00974 PF00528 Binding-protein-dependent transport system inner membrane component J156_00976 PF00296 Luciferase-like monooxygenase J156_00977 PF03358 NADPH-dependent FMN reductase J156_00981 PF00296 Luciferase-like monooxygenase J156_00982 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J156_00983 PF00528 Binding-protein-dependent transport system inner membrane component J156_00986 PF00005 ABC transporter J156_00986 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J156_00987 PF00149 Calcineurin-like phosphoesterase J156_00988 PF04379 ApaG domain J156_00989 PF00398 Ribosomal RNA adenine dimethylase J156_00990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J156_00991 PF09312 SurA N-terminal domain J156_00991 PF00639 PPIC-type PPIASE domain J156_00992 PF04453 LPS transport system D J156_00992 PF03968 OstA-like protein J156_00995 PF00850 Histone deacetylase domain J156_00996 PF01923 Cobalamin adenosyltransferase J156_00998 PF01494 FAD binding domain J156_00999 PF01494 FAD binding domain J156_01003 PF00392 Bacterial regulatory proteins, gntR family J156_01003 PF07729 FCD domain J156_01004 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J156_01005 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J156_01005 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J156_01006 PF03466 LysR substrate binding domain J156_01006 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01007 PF00501 AMP-binding enzyme J156_01007 PF13193 AMP-binding enzyme C-terminal domain J156_01008 PF00171 Aldehyde dehydrogenase family J156_01009 PF00378 Enoyl-CoA hydratase/isomerase J156_01013 PF08450 SMP-30/Gluconolactonase/LRE-like region J156_01014 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J156_01014 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J156_01015 PF01728 FtsJ-like methyltransferase J156_01015 PF18125 RlmM ferredoxin-like domain J156_01018 PF00892 EamA-like transporter family J156_01019 PF00749 tRNA synthetases class I (E and Q), catalytic domain J156_01019 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J156_01022 PF00072 Response regulator receiver domain J156_01022 PF00990 Diguanylate cyclase, GGDEF domain J156_01023 PF00672 HAMP domain J156_01023 PF01627 Hpt domain J156_01023 PF00072 Response regulator receiver domain J156_01023 PF00512 His Kinase A (phospho-acceptor) domain J156_01023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01023 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J156_01024 PF00196 Bacterial regulatory proteins, luxR family J156_01024 PF00072 Response regulator receiver domain J156_01026 PF01625 Peptide methionine sulfoxide reductase J156_01028 PF00923 Transaldolase/Fructose-6-phosphate aldolase J156_01029 PF01272 Transcription elongation factor, GreA/GreB, C-term J156_01029 PF14760 Rnk N-terminus J156_01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01030 PF03466 LysR substrate binding domain J156_01031 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_01031 PF13192 Thioredoxin domain J156_01032 PF10417 C-terminal domain of 1-Cys peroxiredoxin J156_01032 PF00578 AhpC/TSA family J156_01033 PF17827 PrmC N-terminal domain J156_01033 PF05175 Methyltransferase small domain J156_01034 PF00561 alpha/beta hydrolase fold J156_01036 PF00293 NUDIX domain J156_01037 PF01367 5'-3' exonuclease, C-terminal SAM fold J156_01037 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J156_01037 PF00476 DNA polymerase family A J156_01037 PF01612 3'-5' exonuclease J156_01043 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J156_01043 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J156_01043 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J156_01048 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J156_01049 PF02233 NAD(P) transhydrogenase beta subunit J156_01052 PF01063 Amino-transferase class IV J156_01053 PF00082 Subtilase family J156_01053 PF04151 Bacterial pre-peptidase C-terminal domain J156_01054 PF00082 Subtilase family J156_01054 PF04151 Bacterial pre-peptidase C-terminal domain J156_01055 PF04151 Bacterial pre-peptidase C-terminal domain J156_01055 PF00082 Subtilase family J156_01056 PF04073 Aminoacyl-tRNA editing domain J156_01058 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J156_01058 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J156_01059 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J156_01059 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J156_01061 PF03358 NADPH-dependent FMN reductase J156_01062 PF03631 Virulence factor BrkB J156_01063 PF08534 Redoxin J156_01064 PF00708 Acylphosphatase J156_01066 PF03976 Polyphosphate kinase 2 (PPK2) J156_01067 PF00994 Probable molybdopterin binding domain J156_01069 PF03462 PCRF domain J156_01069 PF00472 RF-1 domain J156_01070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J156_01070 PF01488 Shikimate / quinate 5-dehydrogenase J156_01070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J156_01072 PF03550 Outer membrane lipoprotein LolB J156_01073 PF08544 GHMP kinases C terminal J156_01073 PF00288 GHMP kinases N terminal domain J156_01075 PF14572 Phosphoribosyl synthetase-associated domain J156_01075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J156_01076 PF14693 Ribosomal protein TL5, C-terminal domain J156_01076 PF01386 Ribosomal L25p family J156_01077 PF01195 Peptidyl-tRNA hydrolase J156_01078 PF01926 50S ribosome-binding GTPase J156_01078 PF06071 Protein of unknown function (DUF933) J156_01082 PF00009 Elongation factor Tu GTP binding domain J156_01082 PF03143 Elongation factor Tu C-terminal domain J156_01082 PF03144 Elongation factor Tu domain 2 J156_01084 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J156_01085 PF00467 KOW motif J156_01085 PF02357 Transcription termination factor nusG J156_01086 PF00298 Ribosomal protein L11, RNA binding domain J156_01086 PF03946 Ribosomal protein L11, N-terminal domain J156_01087 PF00687 Ribosomal protein L1p/L10e family J156_01088 PF00466 Ribosomal protein L10 J156_01089 PF00542 Ribosomal protein L7/L12 C-terminal domain J156_01089 PF16320 Ribosomal protein L7/L12 dimerisation domain J156_01091 PF04563 RNA polymerase beta subunit J156_01091 PF04560 RNA polymerase Rpb2, domain 7 J156_01091 PF04565 RNA polymerase Rpb2, domain 3 J156_01091 PF00562 RNA polymerase Rpb2, domain 6 J156_01091 PF10385 RNA polymerase beta subunit external 1 domain J156_01091 PF04561 RNA polymerase Rpb2, domain 2 J156_01092 PF04998 RNA polymerase Rpb1, domain 5 J156_01092 PF04983 RNA polymerase Rpb1, domain 3 J156_01092 PF00623 RNA polymerase Rpb1, domain 2 J156_01092 PF04997 RNA polymerase Rpb1, domain 1 J156_01092 PF05000 RNA polymerase Rpb1, domain 4 J156_01093 PF00164 Ribosomal protein S12/S23 J156_01094 PF00177 Ribosomal protein S7p/S5e J156_01095 PF03764 Elongation factor G, domain IV J156_01095 PF14492 Elongation Factor G, domain II J156_01095 PF00679 Elongation factor G C-terminus J156_01095 PF03144 Elongation factor Tu domain 2 J156_01095 PF00009 Elongation factor Tu GTP binding domain J156_01096 PF03144 Elongation factor Tu domain 2 J156_01096 PF00009 Elongation factor Tu GTP binding domain J156_01096 PF03143 Elongation factor Tu C-terminal domain J156_01097 PF00338 Ribosomal protein S10p/S20e J156_01098 PF00297 Ribosomal protein L3 J156_01099 PF00573 Ribosomal protein L4/L1 family J156_01100 PF00276 Ribosomal protein L23 J156_01101 PF00181 Ribosomal Proteins L2, RNA binding domain J156_01101 PF03947 Ribosomal Proteins L2, C-terminal domain J156_01102 PF00203 Ribosomal protein S19 J156_01103 PF00237 Ribosomal protein L22p/L17e J156_01104 PF00189 Ribosomal protein S3, C-terminal domain J156_01104 PF07650 KH domain J156_01105 PF00252 Ribosomal protein L16p/L10e J156_01106 PF00831 Ribosomal L29 protein J156_01107 PF00366 Ribosomal protein S17 J156_01108 PF00238 Ribosomal protein L14p/L23e J156_01109 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J156_01109 PF00467 KOW motif J156_01110 PF00281 Ribosomal protein L5 J156_01110 PF00673 ribosomal L5P family C-terminus J156_01111 PF00253 Ribosomal protein S14p/S29e J156_01112 PF00410 Ribosomal protein S8 J156_01113 PF00347 Ribosomal protein L6 J156_01114 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J156_01115 PF00333 Ribosomal protein S5, N-terminal domain J156_01115 PF03719 Ribosomal protein S5, C-terminal domain J156_01116 PF00327 Ribosomal protein L30p/L7e J156_01117 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J156_01118 PF00344 SecY translocase J156_01119 PF00416 Ribosomal protein S13/S18 J156_01120 PF00411 Ribosomal protein S11 J156_01121 PF01479 S4 domain J156_01121 PF00163 Ribosomal protein S4/S9 N-terminal domain J156_01122 PF01000 RNA polymerase Rpb3/RpoA insert domain J156_01122 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J156_01122 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J156_01123 PF01196 Ribosomal protein L17 J156_01124 PF02600 Disulfide bond formation protein DsbB J156_01126 PF01474 Class-II DAHP synthetase family J156_01128 PF01425 Amidase J156_01131 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J156_01132 PF00056 lactate/malate dehydrogenase, NAD binding domain J156_01132 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J156_01133 PF00043 Glutathione S-transferase, C-terminal domain J156_01133 PF02798 Glutathione S-transferase, N-terminal domain J156_01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_01135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J156_01136 PF00107 Zinc-binding dehydrogenase J156_01136 PF08240 Alcohol dehydrogenase GroES-like domain J156_01137 PF05736 OprF membrane domain J156_01137 PF00691 OmpA family J156_01139 PF00849 RNA pseudouridylate synthase J156_01141 PF00155 Aminotransferase class I and II J156_01143 PF00528 Binding-protein-dependent transport system inner membrane component J156_01144 PF00528 Binding-protein-dependent transport system inner membrane component J156_01145 PF00005 ABC transporter J156_01145 PF17850 CysA C-terminal regulatory domain J156_01145 PF12857 TOBE-like domain J156_01147 PF08240 Alcohol dehydrogenase GroES-like domain J156_01147 PF00107 Zinc-binding dehydrogenase J156_01149 PF05506 Domain of unknown function (DUF756) J156_01149 PF04185 Phosphoesterase family J156_01150 PF10459 Peptidase S46 J156_01151 PF10459 Peptidase S46 J156_01152 PF00300 Histidine phosphatase superfamily (branch 1) J156_01153 PF08245 Mur ligase middle domain J156_01153 PF02875 Mur ligase family, glutamate ligase domain J156_01156 PF00156 Phosphoribosyl transferase domain J156_01157 PF04305 Protein of unknown function (DUF455) J156_01161 PF00149 Calcineurin-like phosphoesterase J156_01163 PF01569 PAP2 superfamily J156_01164 PF00534 Glycosyl transferases group 1 J156_01164 PF13439 Glycosyltransferase Family 4 J156_01165 PF02541 Ppx/GppA phosphatase family J156_01166 PF17941 Polyphosphate kinase C-terminal domain 1 J156_01166 PF13089 Polyphosphate kinase N-terminal domain J156_01166 PF13090 Polyphosphate kinase C-terminal domain 2 J156_01166 PF02503 Polyphosphate kinase middle domain J156_01167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01167 PF00512 His Kinase A (phospho-acceptor) domain J156_01167 PF00989 PAS fold J156_01167 PF11808 Phosphate regulon sensor protein PhoR J156_01168 PF00072 Response regulator receiver domain J156_01168 PF00486 Transcriptional regulatory protein, C terminal J156_01169 PF13181 Tetratricopeptide repeat J156_01169 PF01435 Peptidase family M48 J156_01170 PF00462 Glutaredoxin J156_01172 PF00180 Isocitrate/isopropylmalate dehydrogenase J156_01178 PF13276 HTH-like domain J156_01178 PF00665 Integrase core domain J156_01178 PF13333 Integrase core domain J156_01179 PF01527 Transposase J156_01202 PF01527 Transposase J156_01203 PF13276 HTH-like domain J156_01203 PF00665 Integrase core domain J156_01203 PF13333 Integrase core domain J156_01206 PF00989 PAS fold J156_01206 PF00512 His Kinase A (phospho-acceptor) domain J156_01206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01209 PF05697 Bacterial trigger factor protein (TF) J156_01209 PF05698 Bacterial trigger factor protein (TF) C-terminus J156_01210 PF00574 Clp protease J156_01211 PF07724 AAA domain (Cdc48 subfamily) J156_01211 PF06689 ClpX C4-type zinc finger J156_01211 PF10431 C-terminal, D2-small domain, of ClpB protein J156_01212 PF05362 Lon protease (S16) C-terminal proteolytic domain J156_01212 PF02190 ATP-dependent protease La (LON) substrate-binding domain J156_01212 PF00004 ATPase family associated with various cellular activities (AAA) J156_01213 PF00216 Bacterial DNA-binding protein J156_01219 PF05257 CHAP domain J156_01219 PF01476 LysM domain J156_01220 PF00753 Metallo-beta-lactamase superfamily J156_01220 PF16123 Hydroxyacylglutathione hydrolase C-terminus J156_01222 PF00075 RNase H J156_01223 PF00929 Exonuclease J156_01227 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J156_01229 PF12706 Beta-lactamase superfamily domain J156_01229 PF00753 Metallo-beta-lactamase superfamily J156_01230 PF04055 Radical SAM superfamily J156_01230 PF06463 Molybdenum Cofactor Synthesis C J156_01231 PF01967 MoaC family J156_01232 PF02597 ThiS family J156_01233 PF02391 MoaE protein J156_01236 PF01527 Transposase J156_01237 PF13333 Integrase core domain J156_01237 PF00665 Integrase core domain J156_01237 PF13276 HTH-like domain J156_01243 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J156_01243 PF12170 DNA polymerase III tau subunit V interacting with alpha J156_01243 PF12169 DNA polymerase III subunits gamma and tau domain III J156_01244 PF02575 YbaB/EbfC DNA-binding family J156_01245 PF13662 Toprim domain J156_01245 PF02132 RecR protein J156_01246 PF01230 HIT domain J156_01248 PF01841 Transglutaminase-like superfamily J156_01248 PF11992 Domain of unknown function (DUF3488) J156_01248 PF13559 Domain of unknown function (DUF4129) J156_01250 PF17863 AAA lid domain J156_01250 PF07726 ATPase family associated with various cellular activities (AAA) J156_01254 PF02545 Maf-like protein J156_01255 PF02620 Large ribosomal RNA subunit accumulation protein YceD J156_01256 PF01783 Ribosomal L32p protein family J156_01257 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J156_01257 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J156_01259 PF00698 Acyl transferase domain J156_01261 PF00550 Phosphopantetheine attachment site J156_01262 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_01262 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_01263 PF04715 Anthranilate synthase component I, N terminal region J156_01263 PF00425 chorismate binding enzyme J156_01264 PF02618 YceG-like family J156_01265 PF09115 DNA polymerase III, delta subunit, C terminal J156_01269 PF02954 Bacterial regulatory protein, Fis family J156_01269 PF00158 Sigma-54 interaction domain J156_01269 PF06506 Propionate catabolism activator J156_01271 PF00285 Citrate synthase, C-terminal domain J156_01272 PF00694 Aconitase C-terminal domain J156_01272 PF00330 Aconitase family (aconitate hydratase) J156_01273 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J156_01275 PF04303 PrpF protein J156_01276 PF07715 TonB-dependent Receptor Plug Domain J156_01276 PF00593 TonB dependent receptor J156_01278 PF01835 MG2 domain J156_01278 PF17962 Bacterial macroglobulin domain 6 J156_01278 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J156_01278 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J156_01278 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J156_01278 PF00207 Alpha-2-macroglobulin family J156_01278 PF07703 Alpha-2-macroglobulin bait region domain J156_01278 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J156_01281 PF00912 Transglycosylase J156_01281 PF06832 Penicillin-Binding Protein C-terminus Family J156_01281 PF00905 Penicillin binding protein transpeptidase domain J156_01283 PF08534 Redoxin J156_01285 PF00226 DnaJ domain J156_01285 PF01556 DnaJ C terminal domain J156_01287 PF00072 Response regulator receiver domain J156_01289 PF01145 SPFH domain / Band 7 family J156_01289 PF12221 Bacterial membrane protein N terminal J156_01290 PF01145 SPFH domain / Band 7 family J156_01292 PF00709 Adenylosuccinate synthetase J156_01293 PF11838 ERAP1-like C-terminal domain J156_01293 PF01433 Peptidase family M1 domain J156_01296 PF00440 Bacterial regulatory proteins, tetR family J156_01309 PF13456 Reverse transcriptase-like J156_01309 PF00300 Histidine phosphatase superfamily (branch 1) J156_01310 PF01256 Carbohydrate kinase J156_01312 PF00723 Glycosyl hydrolases family 15 J156_01314 PF07971 Glycosyl hydrolase family 92 J156_01314 PF17678 Glycosyl hydrolase family 92 N-terminal domain J156_01318 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_01322 PF17755 UvrA DNA-binding domain J156_01323 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J156_01323 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J156_01324 PF03450 CO dehydrogenase flavoprotein C-terminal domain J156_01324 PF00941 FAD binding domain in molybdopterin dehydrogenase J156_01325 PF01799 [2Fe-2S] binding domain J156_01325 PF00111 2Fe-2S iron-sulfur cluster binding domain J156_01332 PF01726 LexA DNA binding domain J156_01332 PF00717 Peptidase S24-like J156_01335 PF14579 Helix-hairpin-helix motif J156_01335 PF02811 PHP domain J156_01335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J156_01335 PF07733 Bacterial DNA polymerase III alpha NTPase domain J156_01336 PF00326 Prolyl oligopeptidase family J156_01338 PF03169 OPT oligopeptide transporter protein J156_01341 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J156_01341 PF00326 Prolyl oligopeptidase family J156_01341 PF07676 WD40-like Beta Propeller Repeat J156_01344 PF12833 Helix-turn-helix domain J156_01344 PF02311 AraC-like ligand binding domain J156_01349 PF06628 Catalase-related immune-responsive J156_01349 PF18011 C-terminal domain found in long catalases J156_01349 PF00199 Catalase J156_01350 PF00248 Aldo/keto reductase family J156_01351 PF00135 Carboxylesterase family J156_01352 PF02347 Glycine cleavage system P-protein J156_01355 PF07690 Major Facilitator Superfamily J156_01358 PF08019 Phosphoethanolamine transferase EptA/EptB J156_01358 PF00884 Sulfatase J156_01361 PF00072 Response regulator receiver domain J156_01361 PF00486 Transcriptional regulatory protein, C terminal J156_01362 PF00512 His Kinase A (phospho-acceptor) domain J156_01362 PF08521 Two-component sensor kinase N-terminal J156_01362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01364 PF03776 Septum formation topological specificity factor MinE J156_01365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J156_01366 PF05209 Septum formation inhibitor MinC, N-terminal domain J156_01366 PF03775 Septum formation inhibitor MinC, C-terminal domain J156_01368 PF07730 Histidine kinase J156_01369 PF00072 Response regulator receiver domain J156_01369 PF00196 Bacterial regulatory proteins, luxR family J156_01372 PF00730 HhH-GPD superfamily base excision DNA repair protein J156_01377 PF02222 ATP-grasp domain J156_01379 PF04377 Arginine-tRNA-protein transferase, C terminus J156_01379 PF04376 Arginine-tRNA-protein transferase, N terminus J156_01385 PF00378 Enoyl-CoA hydratase/isomerase J156_01388 PF17760 UvrA interaction domain J156_01388 PF17755 UvrA DNA-binding domain J156_01388 PF00005 ABC transporter J156_01389 PF00829 Ribosomal prokaryotic L21 protein J156_01390 PF01016 Ribosomal L27 protein J156_01391 PF01926 50S ribosome-binding GTPase J156_01391 PF01018 GTP1/OBG J156_01392 PF01649 Ribosomal protein S20 J156_01393 PF03023 Lipid II flippase MurJ J156_01394 PF01687 Riboflavin kinase J156_01394 PF06574 FAD synthetase J156_01395 PF06827 Zinc finger found in FPG and IleRS J156_01395 PF08264 Anticodon-binding domain of tRNA J156_01395 PF00133 tRNA synthetases class I (I, L, M and V) J156_01396 PF01252 Signal peptidase (SPase) II J156_01397 PF02401 LytB protein J156_01399 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J156_01399 PF06481 COX Aromatic Rich Motif J156_01400 PF00115 Cytochrome C and Quinol oxidase polypeptide I J156_01401 PF00510 Cytochrome c oxidase subunit III J156_01402 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J156_01404 PF18073 Rubredoxin metal binding domain J156_01405 PF05656 Protein of unknown function (DUF805) J156_01407 PF12833 Helix-turn-helix domain J156_01408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01408 PF00183 Hsp90 protein J156_01410 PF01740 STAS domain J156_01410 PF08678 Rsbr N terminal J156_01411 PF01740 STAS domain J156_01412 PF13581 Histidine kinase-like ATPase domain J156_01414 PF00072 Response regulator receiver domain J156_01414 PF00512 His Kinase A (phospho-acceptor) domain J156_01414 PF00672 HAMP domain J156_01414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01414 PF01627 Hpt domain J156_01414 PF17149 Periplasmic sensor domain found in signal transduction proteins J156_01415 PF00072 Response regulator receiver domain J156_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01415 PF00512 His Kinase A (phospho-acceptor) domain J156_01415 PF08448 PAS fold J156_01415 PF13188 PAS domain J156_01416 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J156_01416 PF04616 Glycosyl hydrolases family 43 J156_01417 PF07715 TonB-dependent Receptor Plug Domain J156_01417 PF00593 TonB dependent receptor J156_01418 PF00085 Thioredoxin J156_01419 PF07237 Protein of unknown function (DUF1428) J156_01420 PF00512 His Kinase A (phospho-acceptor) domain J156_01420 PF02702 Osmosensitive K+ channel His kinase sensor domain J156_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01420 PF13492 GAF domain J156_01420 PF13493 Domain of unknown function (DUF4118) J156_01421 PF01339 CheB methylesterase J156_01422 PF03705 CheR methyltransferase, all-alpha domain J156_01422 PF01739 CheR methyltransferase, SAM binding domain J156_01423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01423 PF00512 His Kinase A (phospho-acceptor) domain J156_01423 PF01627 Hpt domain J156_01423 PF00672 HAMP domain J156_01423 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J156_01423 PF00072 Response regulator receiver domain J156_01424 PF13426 PAS domain J156_01424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01424 PF00072 Response regulator receiver domain J156_01425 PF00072 Response regulator receiver domain J156_01426 PF00722 Glycosyl hydrolases family 16 J156_01427 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J156_01428 PF01263 Aldose 1-epimerase J156_01429 PF01578 Cytochrome C assembly protein J156_01430 PF02881 SRP54-type protein, helical bundle domain J156_01430 PF02978 Signal peptide binding domain J156_01430 PF00448 SRP54-type protein, GTPase domain J156_01431 PF03060 Nitronate monooxygenase J156_01432 PF01063 Amino-transferase class IV J156_01433 PF00886 Ribosomal protein S16 J156_01434 PF05239 PRC-barrel domain J156_01434 PF01782 RimM N-terminal domain J156_01435 PF01746 tRNA (Guanine-1)-methyltransferase J156_01436 PF01245 Ribosomal protein L19 J156_01437 PF01554 MatE J156_01438 PF01554 MatE J156_01441 PF01479 S4 domain J156_01442 PF00141 Peroxidase J156_01444 PF05188 MutS domain II J156_01444 PF01624 MutS domain I J156_01444 PF05192 MutS domain III J156_01444 PF00488 MutS domain V J156_01444 PF05190 MutS family domain IV J156_01447 PF05593 RHS Repeat J156_01447 PF03527 RHS protein J156_01451 PF02837 Glycosyl hydrolases family 2, sugar binding domain J156_01451 PF16355 Domain of unknown function (DUF4982) J156_01451 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J156_01451 PF00703 Glycosyl hydrolases family 2 J156_01451 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J156_01452 PF07745 Glycosyl hydrolase family 53 J156_01454 PF06114 IrrE N-terminal-like domain J156_01454 PF01381 Helix-turn-helix J156_01454 PF09856 Predicted transcriptional regulator (DUF2083) J156_01455 PF00171 Aldehyde dehydrogenase family J156_01456 PF02770 Acyl-CoA dehydrogenase, middle domain J156_01456 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_01456 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_01457 PF00378 Enoyl-CoA hydratase/isomerase J156_01458 PF00378 Enoyl-CoA hydratase/isomerase J156_01458 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J156_01458 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J156_01459 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J156_01459 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J156_01460 PF01545 Cation efflux family J156_01461 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J156_01461 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J156_01461 PF00378 Enoyl-CoA hydratase/isomerase J156_01462 PF08281 Sigma-70, region 4 J156_01462 PF04542 Sigma-70 region 2 J156_01464 PF13180 PDZ domain J156_01465 PF06421 GTP-binding protein LepA C-terminus J156_01465 PF03144 Elongation factor Tu domain 2 J156_01465 PF00009 Elongation factor Tu GTP binding domain J156_01465 PF00679 Elongation factor G C-terminus J156_01466 PF10502 Signal peptidase, peptidase S26 J156_01468 PF00035 Double-stranded RNA binding motif J156_01468 PF14622 Ribonuclease-III-like J156_01469 PF01926 50S ribosome-binding GTPase J156_01469 PF07650 KH domain J156_01470 PF11967 Recombination protein O N terminal J156_01470 PF02565 Recombination protein O C terminal J156_01472 PF05958 tRNA (Uracil-5-)-methyltransferase J156_01474 PF01323 DSBA-like thioredoxin domain J156_01475 PF01593 Flavin containing amine oxidoreductase J156_01476 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J156_01477 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_01479 PF01048 Phosphorylase superfamily J156_01480 PF00313 'Cold-shock' DNA-binding domain J156_01481 PF01494 FAD binding domain J156_01483 PF08494 DEAD/H associated J156_01483 PF00271 Helicase conserved C-terminal domain J156_01483 PF00270 DEAD/DEAH box helicase J156_01484 PF04675 DNA ligase N terminus J156_01484 PF04679 ATP dependent DNA ligase C terminal region J156_01484 PF01068 ATP dependent DNA ligase domain J156_01486 PF04675 DNA ligase N terminus J156_01486 PF01068 ATP dependent DNA ligase domain J156_01486 PF04679 ATP dependent DNA ligase C terminal region J156_01489 PF00072 Response regulator receiver domain J156_01489 PF00990 Diguanylate cyclase, GGDEF domain J156_01492 PF00108 Thiolase, N-terminal domain J156_01492 PF02803 Thiolase, C-terminal domain J156_01493 PF00082 Subtilase family J156_01493 PF03797 Autotransporter beta-domain J156_01493 PF12951 Passenger-associated-transport-repeat J156_01494 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J156_01494 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J156_01496 PF01863 Protein of unknown function DUF45 J156_01497 PF07043 Protein of unknown function (DUF1328) J156_01499 PF01258 Prokaryotic dksA/traR C4-type zinc finger J156_01503 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J156_01505 PF08274 PhnA Zinc-Ribbon J156_01505 PF03831 PhnA domain J156_01506 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J156_01507 PF07690 Major Facilitator Superfamily J156_01514 PF03706 Lysylphosphatidylglycerol synthase TM region J156_01514 PF09924 Uncharacterised conserved protein (DUF2156) J156_01517 PF01042 Endoribonuclease L-PSP J156_01526 PF04545 Sigma-70, region 4 J156_01526 PF04542 Sigma-70 region 2 J156_01529 PF04060 Putative Fe-S cluster J156_01531 PF01588 Putative tRNA binding domain J156_01531 PF09334 tRNA synthetases class I (M) J156_01534 PF00005 ABC transporter J156_01534 PF13732 Domain of unknown function (DUF4162) J156_01535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J156_01536 PF00324 Amino acid permease J156_01537 PF02574 Homocysteine S-methyltransferase J156_01539 PF02592 Putative vitamin uptake transporter J156_01543 PF03551 Transcriptional regulator PadR-like family J156_01550 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J156_01551 PF07733 Bacterial DNA polymerase III alpha NTPase domain J156_01551 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J156_01551 PF14579 Helix-hairpin-helix motif J156_01551 PF02811 PHP domain J156_01551 PF01336 OB-fold nucleic acid binding domain J156_01552 PF01351 Ribonuclease HII J156_01553 PF02684 Lipid-A-disaccharide synthetase J156_01554 PF00132 Bacterial transferase hexapeptide (six repeats) J156_01554 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J156_01555 PF07977 FabA-like domain J156_01556 PF00132 Bacterial transferase hexapeptide (six repeats) J156_01556 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J156_01558 PF01103 Surface antigen J156_01558 PF07244 Surface antigen variable number repeat J156_01559 PF02163 Peptidase family M50 J156_01559 PF17820 PDZ domain J156_01560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J156_01560 PF13288 DXP reductoisomerase C-terminal domain J156_01560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J156_01562 PF01255 Putative undecaprenyl diphosphate synthase J156_01563 PF01765 Ribosome recycling factor J156_01564 PF00696 Amino acid kinase family J156_01565 PF00072 Response regulator receiver domain J156_01565 PF00990 Diguanylate cyclase, GGDEF domain J156_01566 PF00889 Elongation factor TS J156_01567 PF00318 Ribosomal protein S2 J156_01574 PF00557 Metallopeptidase family M24 J156_01575 PF01966 HD domain J156_01575 PF01909 Nucleotidyltransferase domain J156_01575 PF08335 GlnD PII-uridylyltransferase J156_01576 PF00132 Bacterial transferase hexapeptide (six repeats) J156_01576 PF14602 Hexapeptide repeat of succinyl-transferase J156_01576 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J156_01577 PF03960 ArsC family J156_01578 PF07687 Peptidase dimerisation domain J156_01578 PF01546 Peptidase family M20/M25/M40 J156_01579 PF13537 Glutamine amidotransferase domain J156_01579 PF00733 Asparagine synthase J156_01581 PF07715 TonB-dependent Receptor Plug Domain J156_01581 PF00593 TonB dependent receptor J156_01583 PF01804 Penicillin amidase J156_01584 PF00210 Ferritin-like domain J156_01585 PF05724 Thiopurine S-methyltransferase (TPMT) J156_01587 PF03989 DNA gyrase C-terminal domain, beta-propeller J156_01587 PF00521 DNA gyrase/topoisomerase IV, subunit A J156_01590 PF02321 Outer membrane efflux protein J156_01591 PF00529 HlyD membrane-fusion protein of T1SS J156_01591 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_01592 PF07690 Major Facilitator Superfamily J156_01594 PF01915 Glycosyl hydrolase family 3 C-terminal domain J156_01594 PF14310 Fibronectin type III-like domain J156_01594 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_01596 PF00854 POT family J156_01601 PF12802 MarR family J156_01602 PF01432 Peptidase family M3 J156_01603 PF00255 Glutathione peroxidase J156_01604 PF00970 Oxidoreductase FAD-binding domain J156_01604 PF00175 Oxidoreductase NAD-binding domain J156_01605 PF00005 ABC transporter J156_01606 PF05683 Fumarase C-terminus J156_01606 PF05681 Fumarate hydratase (Fumerase) J156_01608 PF00484 Carbonic anhydrase J156_01609 PF02253 Phospholipase A1 J156_01611 PF00313 'Cold-shock' DNA-binding domain J156_01614 PF00899 ThiF family J156_01615 PF01026 TatD related DNase J156_01618 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_01618 PF02770 Acyl-CoA dehydrogenase, middle domain J156_01618 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_01620 PF02798 Glutathione S-transferase, N-terminal domain J156_01620 PF00043 Glutathione S-transferase, C-terminal domain J156_01621 PF00733 Asparagine synthase J156_01621 PF13537 Glutamine amidotransferase domain J156_01622 PF03358 NADPH-dependent FMN reductase J156_01623 PF00772 DnaB-like helicase N terminal domain J156_01623 PF03796 DnaB-like helicase C terminal domain J156_01624 PF03441 FAD binding domain of DNA photolyase J156_01624 PF00875 DNA photolyase J156_01625 PF05736 OprF membrane domain J156_01625 PF00691 OmpA family J156_01627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01627 PF03466 LysR substrate binding domain J156_01630 PF00529 HlyD membrane-fusion protein of T1SS J156_01630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_01631 PF00873 AcrB/AcrD/AcrF family J156_01632 PF00106 short chain dehydrogenase J156_01633 PF02321 Outer membrane efflux protein J156_01634 PF00990 Diguanylate cyclase, GGDEF domain J156_01634 PF08448 PAS fold J156_01636 PF00990 Diguanylate cyclase, GGDEF domain J156_01653 PF01527 Transposase J156_01662 PF00082 Subtilase family J156_01663 PF01668 SmpB protein J156_01664 PF03364 Polyketide cyclase / dehydrase and lipid transport J156_01665 PF03658 RnfH family Ubiquitin J156_01666 PF04355 SmpA / OmlA family J156_01667 PF01475 Ferric uptake regulator family J156_01668 PF02463 RecF/RecN/SMC N terminal domain J156_01669 PF01628 HrcA protein C terminal domain J156_01669 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J156_01670 PF01025 GrpE J156_01671 PF00012 Hsp70 protein J156_01672 PF01556 DnaJ C terminal domain J156_01672 PF00684 DnaJ central domain J156_01672 PF00226 DnaJ domain J156_01674 PF08543 Phosphomethylpyrimidine kinase J156_01679 PF00664 ABC transporter transmembrane region J156_01679 PF03412 Peptidase C39 family J156_01679 PF00005 ABC transporter J156_01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01680 PF03466 LysR substrate binding domain J156_01681 PF00664 ABC transporter transmembrane region J156_01681 PF00005 ABC transporter J156_01682 PF01205 Uncharacterized protein family UPF0029 J156_01683 PF03641 Possible lysine decarboxylase J156_01684 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J156_01684 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_01685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J156_01685 PF00364 Biotin-requiring enzyme J156_01685 PF02817 e3 binding domain J156_01686 PF16078 2-oxoglutarate dehydrogenase N-terminus J156_01686 PF16870 2-oxoglutarate dehydrogenase C-terminal J156_01686 PF02779 Transketolase, pyrimidine binding domain J156_01686 PF00676 Dehydrogenase E1 component J156_01688 PF08007 Cupin superfamily protein J156_01690 PF08328 Adenylosuccinate lyase C-terminal J156_01690 PF00206 Lyase J156_01692 PF03471 Transporter associated domain J156_01692 PF00571 CBS domain J156_01692 PF01595 Cyclin M transmembrane N-terminal domain J156_01693 PF00206 Lyase J156_01693 PF10415 Fumarase C C-terminus J156_01698 PF00005 ABC transporter J156_01699 PF00392 Bacterial regulatory proteins, gntR family J156_01701 PF00255 Glutathione peroxidase J156_01702 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J156_01702 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J156_01703 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J156_01703 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J156_01703 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J156_01704 PF04102 SlyX J156_01707 PF00356 Bacterial regulatory proteins, lacI family J156_01708 PF07690 Major Facilitator Superfamily J156_01709 PF00294 pfkB family carbohydrate kinase J156_01711 PF02965 Vitamin B12 dependent methionine synthase, activation domain J156_01711 PF02310 B12 binding domain J156_01711 PF02607 B12 binding domain J156_01711 PF00809 Pterin binding enzyme J156_01711 PF02574 Homocysteine S-methyltransferase J156_01712 PF02574 Homocysteine S-methyltransferase J156_01712 PF00809 Pterin binding enzyme J156_01713 PF01209 ubiE/COQ5 methyltransferase family J156_01714 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_01714 PF02770 Acyl-CoA dehydrogenase, middle domain J156_01714 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_01717 PF00575 S1 RNA binding domain J156_01717 PF08461 Ribonuclease R winged-helix domain J156_01717 PF17876 Cold shock domain J156_01717 PF00773 RNB domain J156_01717 PF08206 Ribonuclease B OB domain J156_01719 PF08032 RNA 2'-O ribose methyltransferase substrate binding J156_01719 PF00588 SpoU rRNA Methylase family J156_01720 PF00990 Diguanylate cyclase, GGDEF domain J156_01720 PF07694 5TMR of 5TMR-LYT J156_01721 PF00929 Exonuclease J156_01723 PF01895 PhoU domain J156_01724 PF00005 ABC transporter J156_01725 PF00528 Binding-protein-dependent transport system inner membrane component J156_01726 PF00528 Binding-protein-dependent transport system inner membrane component J156_01727 PF12849 PBP superfamily domain J156_01728 PF12849 PBP superfamily domain J156_01731 PF00484 Carbonic anhydrase J156_01732 PF00916 Sulfate permease family J156_01732 PF01740 STAS domain J156_01733 PF00730 HhH-GPD superfamily base excision DNA repair protein J156_01733 PF00633 Helix-hairpin-helix motif J156_01733 PF10576 Iron-sulfur binding domain of endonuclease III J156_01735 PF00378 Enoyl-CoA hydratase/isomerase J156_01736 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J156_01736 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J156_01737 PF00293 NUDIX domain J156_01738 PF00581 Rhodanese-like domain J156_01745 PF01170 Putative RNA methylase family UPF0020 J156_01745 PF02926 THUMP domain J156_01745 PF10672 S-adenosylmethionine-dependent methyltransferase J156_01746 PF01513 ATP-NAD kinase J156_01750 PF00929 Exonuclease J156_01750 PF08411 Exonuclease C-terminal J156_01751 PF01494 FAD binding domain J156_01752 PF00266 Aminotransferase class-V J156_01754 PF06052 3-hydroxyanthranilic acid dioxygenase J156_01755 PF00484 Carbonic anhydrase J156_01764 PF00196 Bacterial regulatory proteins, luxR family J156_01764 PF00072 Response regulator receiver domain J156_01767 PF04299 Putative FMN-binding domain J156_01771 PF00152 tRNA synthetases class II (D, K and N) J156_01771 PF01336 OB-fold nucleic acid binding domain J156_01772 PF01521 Iron-sulphur cluster biosynthesis J156_01773 PF01250 Ribosomal protein S6 J156_01774 PF01084 Ribosomal protein S18 J156_01775 PF01281 Ribosomal protein L9, N-terminal domain J156_01775 PF03948 Ribosomal protein L9, C-terminal domain J156_01776 PF02463 RecF/RecN/SMC N terminal domain J156_01777 PF04354 ZipA, C-terminal FtsZ-binding domain J156_01779 PF00155 Aminotransferase class I and II J156_01780 PF03120 NAD-dependent DNA ligase OB-fold domain J156_01780 PF12826 Helix-hairpin-helix motif J156_01780 PF00533 BRCA1 C Terminus (BRCT) domain J156_01780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J156_01780 PF01653 NAD-dependent DNA ligase adenylation domain J156_01781 PF00152 tRNA synthetases class II (D, K and N) J156_01783 PF01008 Initiation factor 2 subunit family J156_01784 PF00521 DNA gyrase/topoisomerase IV, subunit A J156_01784 PF03989 DNA gyrase C-terminal domain, beta-propeller J156_01785 PF13360 PQQ-like domain J156_01787 PF01175 Urocanase Rossmann-like domain J156_01787 PF17391 Urocanase N-terminal domain J156_01787 PF17392 Urocanase C-terminal domain J156_01789 PF00221 Aromatic amino acid lyase J156_01790 PF07969 Amidohydrolase family J156_01792 PF07702 UTRA domain J156_01792 PF00392 Bacterial regulatory proteins, gntR family J156_01798 PF01794 Ferric reductase like transmembrane component J156_01799 PF00174 Oxidoreductase molybdopterin binding domain J156_01800 PF00266 Aminotransferase class-V J156_01801 PF01842 ACT domain J156_01801 PF01817 Chorismate mutase type II J156_01801 PF00800 Prephenate dehydratase J156_01802 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J156_01804 PF03544 Gram-negative bacterial TonB protein C-terminal J156_01805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J156_01805 PF02403 Seryl-tRNA synthetase N-terminal domain J156_01806 PF02525 Flavodoxin-like fold J156_01807 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01807 PF03466 LysR substrate binding domain J156_01810 PF02203 Tar ligand binding domain homologue J156_01810 PF00672 HAMP domain J156_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_01813 PF00072 Response regulator receiver domain J156_01813 PF13188 PAS domain J156_01813 PF08448 PAS fold J156_01813 PF00512 His Kinase A (phospho-acceptor) domain J156_01813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01814 PF00486 Transcriptional regulatory protein, C terminal J156_01814 PF00072 Response regulator receiver domain J156_01815 PF06745 KaiC J156_01816 PF00072 Response regulator receiver domain J156_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01816 PF13426 PAS domain J156_01818 PF03918 Cytochrome C biogenesis protein J156_01819 PF08534 Redoxin J156_01820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J156_01820 PF01578 Cytochrome C assembly protein J156_01821 PF03100 CcmE J156_01823 PF01578 Cytochrome C assembly protein J156_01824 PF00082 Subtilase family J156_01826 PF04542 Sigma-70 region 2 J156_01826 PF08281 Sigma-70, region 4 J156_01829 PF00034 Cytochrome c J156_01832 PF05523 WxcM-like, C-terminal J156_01836 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J156_01837 PF01943 Polysaccharide biosynthesis protein J156_01838 PF00535 Glycosyl transferase family 2 J156_01841 PF08241 Methyltransferase domain J156_01845 PF13579 Glycosyl transferase 4-like domain J156_01845 PF00534 Glycosyl transferases group 1 J156_01848 PF00005 ABC transporter J156_01849 PF00005 ABC transporter J156_01849 PF00664 ABC transporter transmembrane region J156_01850 PF07690 Major Facilitator Superfamily J156_01851 PF00296 Luciferase-like monooxygenase J156_01853 PF00571 CBS domain J156_01853 PF03471 Transporter associated domain J156_01853 PF01595 Cyclin M transmembrane N-terminal domain J156_01855 PF01384 Phosphate transporter family J156_01858 PF00204 DNA gyrase B J156_01858 PF01751 Toprim domain J156_01858 PF00986 DNA gyrase B subunit, carboxyl terminus J156_01858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_01860 PF06418 CTP synthase N-terminus J156_01860 PF00117 Glutamine amidotransferase class-I J156_01861 PF00793 DAHP synthetase I family J156_01863 PF03952 Enolase, N-terminal domain J156_01863 PF00113 Enolase, C-terminal TIM barrel domain J156_01864 PF04977 Septum formation initiator J156_01865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J156_01866 PF02542 YgbB family J156_01867 PF01142 tRNA pseudouridine synthase D (TruD) J156_01868 PF01713 Smr domain J156_01869 PF01975 Survival protein SurE J156_01871 PF09335 SNARE associated Golgi protein J156_01872 PF01476 LysM domain J156_01872 PF01551 Peptidase family M23 J156_01874 PF04430 Protein of unknown function (DUF498/DUF598) J156_01875 PF01985 CRS1 / YhbY (CRM) domain J156_01876 PF01728 FtsJ-like methyltransferase J156_01877 PF17862 AAA+ lid domain J156_01877 PF00004 ATPase family associated with various cellular activities (AAA) J156_01877 PF01434 Peptidase family M41 J156_01877 PF06480 FtsH Extracellular J156_01878 PF00809 Pterin binding enzyme J156_01880 PF17209 Hfq protein J156_01881 PF01926 50S ribosome-binding GTPase J156_01881 PF16360 GTP-binding GTPase Middle Region J156_01881 PF13167 GTP-binding GTPase N-terminal J156_01882 PF02464 Competence-damaged protein J156_01883 PF03109 ABC1 family J156_01884 PF01726 LexA DNA binding domain J156_01884 PF00717 Peptidase S24-like J156_01885 PF00154 recA bacterial DNA recombination protein J156_01886 PF02631 RecX family J156_01887 PF02272 DHHA1 domain J156_01887 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J156_01887 PF01411 tRNA synthetases class II (A) J156_01888 PF02599 Global regulator protein family J156_01890 PF13426 PAS domain J156_01890 PF08447 PAS fold J156_01890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_01891 PF02678 Pirin J156_01891 PF17954 Quercetinase C-terminal cupin domain J156_01892 PF03466 LysR substrate binding domain J156_01892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01897 PF08543 Phosphomethylpyrimidine kinase J156_01897 PF02581 Thiamine monophosphate synthase J156_01900 PF02562 PhoH-like protein J156_01900 PF13638 PIN domain J156_01901 PF00578 AhpC/TSA family J156_01904 PF00701 Dihydrodipicolinate synthetase family J156_01906 PF11953 Domain of unknown function (DUF3470) J156_01906 PF00037 4Fe-4S binding domain J156_01907 PF05035 2-keto-3-deoxy-galactonokinase J156_01908 PF08450 SMP-30/Gluconolactonase/LRE-like region J156_01909 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J156_01909 PF13378 Enolase C-terminal domain-like J156_01910 PF01081 KDPG and KHG aldolase J156_01912 PF03466 LysR substrate binding domain J156_01912 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_01915 PF00942 Cellulose binding domain J156_01915 PF03442 Carbohydrate binding domain X2 J156_01918 PF01055 Glycosyl hydrolases family 31 J156_01918 PF17137 Domain of unknown function (DUF5110) J156_01918 PF16338 Domain of unknown function (DUF4968) J156_01920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J156_01920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J156_01922 PF00083 Sugar (and other) transporter J156_01925 PF01520 N-acetylmuramoyl-L-alanine amidase J156_01926 PF02649 Type I GTP cyclohydrolase folE2 J156_01930 PF12626 Polymerase A arginine-rich C-terminus J156_01930 PF12627 Probable RNA and SrmB- binding site of polymerase A J156_01930 PF01743 Poly A polymerase head domain J156_01931 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J156_01932 PF02548 Ketopantoate hydroxymethyltransferase J156_01933 PF02569 Pantoate-beta-alanine ligase J156_01934 PF02261 Aspartate decarboxylase J156_01935 PF00342 Phosphoglucose isomerase J156_01939 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_01939 PF01915 Glycosyl hydrolase family 3 C-terminal domain J156_01939 PF14310 Fibronectin type III-like domain J156_01940 PF00474 Sodium:solute symporter family J156_01941 PF01590 GAF domain J156_01941 PF00990 Diguanylate cyclase, GGDEF domain J156_01941 PF00360 Phytochrome region J156_01941 PF00563 EAL domain J156_01942 PF02013 Cellulose or protein binding domain J156_01942 PF00150 Cellulase (glycosyl hydrolase family 5) J156_01943 PF00072 Response regulator receiver domain J156_01945 PF04551 GcpE protein J156_01946 PF01569 PAP2 superfamily J156_01947 PF07690 Major Facilitator Superfamily J156_01948 PF01177 Asp/Glu/Hydantoin racemase J156_01949 PF00892 EamA-like transporter family J156_01950 PF01565 FAD binding domain J156_01950 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J156_01951 PF01180 Dihydroorotate dehydrogenase J156_01954 PF00171 Aldehyde dehydrogenase family J156_01957 PF00535 Glycosyl transferase family 2 J156_01958 PF01522 Polysaccharide deacetylase J156_01958 PF14883 Hypothetical glycosyl hydrolase family 13 J156_01960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J156_01960 PF17287 POTRA domain J156_01960 PF08479 POTRA domain, ShlB-type J156_01961 PF04829 Pre-toxin domain with VENN motif J156_01961 PF13332 Hemagglutinin repeat J156_01961 PF05594 Haemagluttinin repeat J156_01962 PF04829 Pre-toxin domain with VENN motif J156_01962 PF05594 Haemagluttinin repeat J156_01962 PF13332 Hemagglutinin repeat J156_01964 PF13018 Extended Signal Peptide of Type V secretion system J156_01964 PF05594 Haemagluttinin repeat J156_01964 PF13332 Hemagglutinin repeat J156_01964 PF05860 haemagglutination activity domain J156_01964 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J156_01966 PF01842 ACT domain J156_01966 PF03447 Homoserine dehydrogenase, NAD binding domain J156_01966 PF00696 Amino acid kinase family J156_01966 PF13840 ACT domain J156_01966 PF00742 Homoserine dehydrogenase J156_01967 PF00288 GHMP kinases N terminal domain J156_01967 PF08544 GHMP kinases C terminal J156_01969 PF00291 Pyridoxal-phosphate dependent enzyme J156_01969 PF14821 Threonine synthase N terminus J156_01971 PF00027 Cyclic nucleotide-binding domain J156_01971 PF13545 Crp-like helix-turn-helix domain J156_01972 PF13393 Histidyl-tRNA synthetase J156_01972 PF03129 Anticodon binding domain J156_01974 PF08029 HisG, C-terminal domain J156_01974 PF01634 ATP phosphoribosyltransferase J156_01975 PF00815 Histidinol dehydrogenase J156_01976 PF00155 Aminotransferase class I and II J156_01977 PF00475 Imidazoleglycerol-phosphate dehydratase J156_01978 PF00117 Glutamine amidotransferase class-I J156_01979 PF00977 Histidine biosynthesis protein J156_01980 PF00977 Histidine biosynthesis protein J156_01981 PF01502 Phosphoribosyl-AMP cyclohydrolase J156_01981 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J156_01985 PF03079 ARD/ARD' family J156_01986 PF00596 Class II Aldolase and Adducin N-terminal domain J156_01987 PF13520 Amino acid permease J156_01988 PF13520 Amino acid permease J156_01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J156_01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J156_01990 PF01842 ACT domain J156_01991 PF02913 FAD linked oxidases, C-terminal domain J156_01991 PF01565 FAD binding domain J156_01995 PF01132 Elongation factor P (EF-P) OB domain J156_01995 PF09285 Elongation factor P, C-terminal J156_01995 PF08207 Elongation factor P (EF-P) KOW-like domain J156_01996 PF00106 short chain dehydrogenase J156_01997 PF00682 HMGL-like J156_01999 PF00378 Enoyl-CoA hydratase/isomerase J156_02001 PF02421 Ferrous iron transport protein B J156_02001 PF07670 Nucleoside recognition J156_02001 PF07664 Ferrous iron transport protein B C terminus J156_02004 PF00155 Aminotransferase class I and II J156_02005 PF03475 3-alpha domain J156_02005 PF03473 MOSC domain J156_02006 PF01113 Dihydrodipicolinate reductase, N-terminus J156_02006 PF05173 Dihydrodipicolinate reductase, C-terminus J156_02007 PF00117 Glutamine amidotransferase class-I J156_02007 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J156_02009 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J156_02009 PF02142 MGS-like domain J156_02009 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J156_02010 PF01272 Transcription elongation factor, GreA/GreB, C-term J156_02010 PF03449 Transcription elongation factor, N-terminal J156_02012 PF01368 DHH family J156_02012 PF02272 DHHA1 domain J156_02012 PF17768 RecJ OB domain J156_02020 PF04397 LytTr DNA-binding domain J156_02020 PF00072 Response regulator receiver domain J156_02021 PF00472 RF-1 domain J156_02021 PF03462 PCRF domain J156_02022 PF00152 tRNA synthetases class II (D, K and N) J156_02022 PF01336 OB-fold nucleic acid binding domain J156_02023 PF00072 Response regulator receiver domain J156_02024 PF00072 Response regulator receiver domain J156_02024 PF00512 His Kinase A (phospho-acceptor) domain J156_02024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02024 PF01627 Hpt domain J156_02025 PF00378 Enoyl-CoA hydratase/isomerase J156_02026 PF00501 AMP-binding enzyme J156_02026 PF13193 AMP-binding enzyme C-terminal domain J156_02028 PF00694 Aconitase C-terminal domain J156_02028 PF00330 Aconitase family (aconitate hydratase) J156_02031 PF00330 Aconitase family (aconitate hydratase) J156_02031 PF06434 Aconitate hydratase 2 N-terminus J156_02031 PF11791 Aconitate B N-terminal domain J156_02032 PF00561 alpha/beta hydrolase fold J156_02033 PF00563 EAL domain J156_02033 PF03707 Bacterial signalling protein N terminal repeat J156_02033 PF00990 Diguanylate cyclase, GGDEF domain J156_02034 PF01339 CheB methylesterase J156_02034 PF00072 Response regulator receiver domain J156_02035 PF03975 CheD chemotactic sensory transduction J156_02036 PF01739 CheR methyltransferase, SAM binding domain J156_02036 PF03705 CheR methyltransferase, all-alpha domain J156_02037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02037 PF00672 HAMP domain J156_02037 PF02203 Tar ligand binding domain homologue J156_02038 PF00672 HAMP domain J156_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02038 PF02203 Tar ligand binding domain homologue J156_02039 PF02203 Tar ligand binding domain homologue J156_02039 PF00672 HAMP domain J156_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02040 PF02203 Tar ligand binding domain homologue J156_02040 PF00672 HAMP domain J156_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02041 PF02203 Tar ligand binding domain homologue J156_02041 PF00672 HAMP domain J156_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02042 PF00672 HAMP domain J156_02042 PF02203 Tar ligand binding domain homologue J156_02042 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02043 PF00672 HAMP domain J156_02043 PF02203 Tar ligand binding domain homologue J156_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02045 PF00672 HAMP domain J156_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02045 PF02203 Tar ligand binding domain homologue J156_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02046 PF00672 HAMP domain J156_02046 PF17200 Single Cache domain 2 J156_02046 PF00672 HAMP domain J156_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02046 PF17200 Single Cache domain 2 J156_02048 PF02203 Tar ligand binding domain homologue J156_02048 PF00672 HAMP domain J156_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02049 PF01627 Hpt domain J156_02049 PF02895 Signal transducing histidine kinase, homodimeric domain J156_02049 PF09078 CheY binding J156_02049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02049 PF01584 CheW-like domain J156_02050 PF00072 Response regulator receiver domain J156_02052 PF01584 CheW-like domain J156_02053 PF13614 AAA domain J156_02054 PF00691 OmpA family J156_02054 PF13677 Membrane MotB of proton-channel complex MotA/MotB J156_02055 PF01618 MotA/TolQ/ExbB proton channel family J156_02058 PF03793 PASTA domain J156_02058 PF00069 Protein kinase domain J156_02067 PF00665 Integrase core domain J156_02067 PF13333 Integrase core domain J156_02067 PF13276 HTH-like domain J156_02068 PF01527 Transposase J156_02074 PF13186 Iron-sulfur cluster-binding domain J156_02074 PF04055 Radical SAM superfamily J156_02077 PF01627 Hpt domain J156_02077 PF02895 Signal transducing histidine kinase, homodimeric domain J156_02077 PF01584 CheW-like domain J156_02077 PF07194 P2 response regulator binding domain J156_02077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02078 PF04344 Chemotaxis phosphatase, CheZ J156_02079 PF00072 Response regulator receiver domain J156_02080 PF04542 Sigma-70 region 2 J156_02080 PF04539 Sigma-70 region 3 J156_02080 PF04545 Sigma-70, region 4 J156_02081 PF10609 NUBPL iron-transfer P-loop NTPase J156_02082 PF00448 SRP54-type protein, GTPase domain J156_02083 PF00771 FHIPEP family J156_02084 PF01312 FlhB HrpN YscU SpaS Family J156_02085 PF00563 EAL domain J156_02085 PF00990 Diguanylate cyclase, GGDEF domain J156_02085 PF03707 Bacterial signalling protein N terminal repeat J156_02086 PF13188 PAS domain J156_02086 PF03707 Bacterial signalling protein N terminal repeat J156_02086 PF00990 Diguanylate cyclase, GGDEF domain J156_02086 PF00563 EAL domain J156_02087 PF03707 Bacterial signalling protein N terminal repeat J156_02087 PF00563 EAL domain J156_02087 PF13188 PAS domain J156_02087 PF00990 Diguanylate cyclase, GGDEF domain J156_02088 PF01311 Bacterial export proteins, family 1 J156_02089 PF01313 Bacterial export proteins, family 3 J156_02091 PF00813 FliP family J156_02092 PF04347 Flagellar biosynthesis protein, FliO J156_02093 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J156_02094 PF02154 Flagellar motor switch protein FliM J156_02094 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J156_02098 PF18269 T3SS EscN ATPase C-terminal domain J156_02098 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J156_02100 PF01706 FliG C-terminal domain J156_02100 PF14841 FliG middle domain J156_02100 PF14842 FliG N-terminal domain J156_02101 PF01514 Secretory protein of YscJ/FliF family J156_02101 PF08345 Flagellar M-ring protein C-terminal J156_02102 PF02049 Flagellar hook-basal body complex protein FliE J156_02103 PF00535 Glycosyl transferase family 2 J156_02103 PF00534 Glycosyl transferases group 1 J156_02111 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J156_02111 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J156_02113 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J156_02114 PF00072 Response regulator receiver domain J156_02114 PF02954 Bacterial regulatory protein, Fis family J156_02114 PF00158 Sigma-54 interaction domain J156_02115 PF01339 CheB methylesterase J156_02115 PF00072 Response regulator receiver domain J156_02116 PF04552 Sigma-54, DNA binding domain J156_02116 PF00309 Sigma-54 factor, Activator interacting domain (AID) J156_02116 PF04963 Sigma-54 factor, core binding domain J156_02117 PF00196 Bacterial regulatory proteins, luxR family J156_02117 PF00072 Response regulator receiver domain J156_02120 PF02561 Flagellar protein FliS J156_02121 PF07195 Flagellar hook-associated protein 2 C-terminus J156_02121 PF02465 Flagellar hook-associated protein 2 N-terminus J156_02121 PF07196 Flagellin hook IN motif J156_02122 PF00700 Bacterial flagellin C-terminal helical region J156_02122 PF00669 Bacterial flagellin N-terminal helical region J156_02123 PF00700 Bacterial flagellin C-terminal helical region J156_02123 PF00669 Bacterial flagellin N-terminal helical region J156_02124 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J156_02124 PF07196 Flagellin hook IN motif J156_02125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J156_02125 PF10135 Rod binding protein J156_02126 PF02119 Flagellar P-ring protein J156_02127 PF02107 Flagellar L-ring protein J156_02128 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J156_02128 PF00460 Flagella basal body rod protein J156_02129 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J156_02129 PF00460 Flagella basal body rod protein J156_02130 PF00460 Flagella basal body rod protein J156_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J156_02130 PF07559 Flagellar basal body protein FlaE J156_02131 PF03963 Flagellar hook capping protein - N-terminal region J156_02132 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J156_02132 PF00460 Flagella basal body rod protein J156_02134 PF01584 CheW-like domain J156_02134 PF00072 Response regulator receiver domain J156_02138 PF13188 PAS domain J156_02138 PF00989 PAS fold J156_02138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02138 PF00512 His Kinase A (phospho-acceptor) domain J156_02138 PF13426 PAS domain J156_02139 PF03707 Bacterial signalling protein N terminal repeat J156_02139 PF00563 EAL domain J156_02139 PF00990 Diguanylate cyclase, GGDEF domain J156_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02140 PF07730 Histidine kinase J156_02141 PF00563 EAL domain J156_02141 PF03707 Bacterial signalling protein N terminal repeat J156_02141 PF00990 Diguanylate cyclase, GGDEF domain J156_02143 PF00672 HAMP domain J156_02143 PF12729 Four helix bundle sensory module for signal transduction J156_02143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02144 PF04356 Protein of unknown function (DUF489) J156_02146 PF00293 NUDIX domain J156_02147 PF02617 ATP-dependent Clp protease adaptor protein ClpS J156_02148 PF07724 AAA domain (Cdc48 subfamily) J156_02148 PF02861 Clp amino terminal domain, pathogenicity island component J156_02148 PF10431 C-terminal, D2-small domain, of ClpB protein J156_02148 PF00004 ATPase family associated with various cellular activities (AAA) J156_02148 PF17871 AAA lid domain J156_02149 PF01176 Translation initiation factor 1A / IF-1 J156_02150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J156_02152 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_02153 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J156_02153 PF17854 FtsK alpha domain J156_02153 PF09397 Ftsk gamma domain J156_02153 PF01580 FtsK/SpoIIIE family J156_02155 PF03548 Outer membrane lipoprotein carrier protein LolA J156_02157 PF00004 ATPase family associated with various cellular activities (AAA) J156_02157 PF16193 AAA C-terminal domain J156_02157 PF12002 MgsA AAA+ ATPase C terminal J156_02159 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J156_02161 PF00108 Thiolase, N-terminal domain J156_02161 PF02803 Thiolase, C-terminal domain J156_02162 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J156_02162 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J156_02162 PF00378 Enoyl-CoA hydratase/isomerase J156_02164 PF00334 Nucleoside diphosphate kinase J156_02165 PF04055 Radical SAM superfamily J156_02167 PF13464 Domain of unknown function (DUF4115) J156_02169 PF13360 PQQ-like domain J156_02169 PF01011 PQQ enzyme repeat J156_02170 PF01926 50S ribosome-binding GTPase J156_02170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J156_02171 PF03453 MoeA N-terminal region (domain I and II) J156_02171 PF03454 MoeA C-terminal region (domain IV) J156_02171 PF00994 Probable molybdopterin binding domain J156_02172 PF00899 ThiF family J156_02177 PF08240 Alcohol dehydrogenase GroES-like domain J156_02177 PF13823 Alcohol dehydrogenase GroES-associated J156_02177 PF00107 Zinc-binding dehydrogenase J156_02179 PF03372 Endonuclease/Exonuclease/phosphatase family J156_02181 PF03454 MoeA C-terminal region (domain IV) J156_02181 PF00994 Probable molybdopterin binding domain J156_02181 PF03453 MoeA N-terminal region (domain I and II) J156_02182 PF12804 MobA-like NTP transferase domain J156_02184 PF00561 alpha/beta hydrolase fold J156_02185 PF01566 Natural resistance-associated macrophage protein J156_02186 PF02742 Iron dependent repressor, metal binding and dimerisation domain J156_02186 PF01325 Iron dependent repressor, N-terminal DNA binding domain J156_02187 PF14437 MafB19-like deaminase J156_02188 PF00929 Exonuclease J156_02189 PF00924 Mechanosensitive ion channel J156_02189 PF05552 Conserved TM helix J156_02190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J156_02190 PF00391 PEP-utilising enzyme, mobile domain J156_02190 PF02896 PEP-utilising enzyme, TIM barrel domain J156_02191 PF03618 Kinase/pyrophosphorylase J156_02195 PF01066 CDP-alcohol phosphatidyltransferase J156_02197 PF00561 alpha/beta hydrolase fold J156_02200 PF01266 FAD dependent oxidoreductase J156_02200 PF00355 Rieske [2Fe-2S] domain J156_02202 PF09371 Tex-like protein N-terminal domain J156_02202 PF00575 S1 RNA binding domain J156_02202 PF17674 HHH domain J156_02202 PF16921 Tex protein YqgF-like domain J156_02203 PF09308 LuxQ, periplasmic J156_02203 PF00072 Response regulator receiver domain J156_02203 PF00512 His Kinase A (phospho-acceptor) domain J156_02203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02211 PF00034 Cytochrome c J156_02213 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_02214 PF00873 AcrB/AcrD/AcrF family J156_02215 PF00873 AcrB/AcrD/AcrF family J156_02216 PF01081 KDPG and KHG aldolase J156_02217 PF00920 Dehydratase family J156_02218 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J156_02219 PF02685 Glucokinase J156_02220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J156_02220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J156_02221 PF17912 MalK OB fold domain J156_02221 PF00005 ABC transporter J156_02224 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J156_02225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J156_02226 PF02910 Fumarate reductase flavoprotein C-term J156_02226 PF00890 FAD binding domain J156_02228 PF13085 2Fe-2S iron-sulfur cluster binding domain J156_02229 PF03937 Flavinator of succinate dehydrogenase J156_02231 PF02687 FtsX-like permease family J156_02231 PF12704 MacB-like periplasmic core domain J156_02232 PF00005 ABC transporter J156_02234 PF00753 Metallo-beta-lactamase superfamily J156_02234 PF03772 Competence protein J156_02235 PF01618 MotA/TolQ/ExbB proton channel family J156_02237 PF00005 ABC transporter J156_02237 PF00664 ABC transporter transmembrane region J156_02238 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J156_02239 PF02348 Cytidylyltransferase J156_02240 PF01451 Low molecular weight phosphotyrosine protein phosphatase J156_02242 PF02151 UvrB/uvrC motif J156_02242 PF08459 UvrC Helix-hairpin-helix N-terminal J156_02242 PF01541 GIY-YIG catalytic domain J156_02243 PF01066 CDP-alcohol phosphatidyltransferase J156_02247 PF00668 Condensation domain J156_02247 PF00501 AMP-binding enzyme J156_02247 PF00550 Phosphopantetheine attachment site J156_02247 PF13193 AMP-binding enzyme C-terminal domain J156_02248 PF00550 Phosphopantetheine attachment site J156_02248 PF13193 AMP-binding enzyme C-terminal domain J156_02248 PF00668 Condensation domain J156_02248 PF00975 Thioesterase domain J156_02248 PF00501 AMP-binding enzyme J156_02250 PF01527 Transposase J156_02252 PF01527 Transposase J156_02253 PF00589 Phage integrase family J156_02255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J156_02255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J156_02255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J156_02257 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J156_02260 PF00072 Response regulator receiver domain J156_02260 PF00196 Bacterial regulatory proteins, luxR family J156_02261 PF12111 Polyribonucleotide phosphorylase C terminal J156_02261 PF10150 Ribonuclease E/G family J156_02261 PF00575 S1 RNA binding domain J156_02262 PF01479 S4 domain J156_02262 PF00849 RNA pseudouridylate synthase J156_02263 PF11737 Protein of unknown function (DUF3300) J156_02264 PF02535 ZIP Zinc transporter J156_02266 PF01329 Pterin 4 alpha carbinolamine dehydratase J156_02267 PF01106 NifU-like domain J156_02276 PF12697 Alpha/beta hydrolase family J156_02276 PF08241 Methyltransferase domain J156_02278 PF00106 short chain dehydrogenase J156_02281 PF13333 Integrase core domain J156_02281 PF13276 HTH-like domain J156_02281 PF00665 Integrase core domain J156_02282 PF01527 Transposase J156_02283 PF01494 FAD binding domain J156_02284 PF09335 SNARE associated Golgi protein J156_02286 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J156_02287 PF07995 Glucose / Sorbosone dehydrogenase J156_02289 PF00144 Beta-lactamase J156_02290 PF04397 LytTr DNA-binding domain J156_02290 PF00072 Response regulator receiver domain J156_02291 PF06580 Histidine kinase J156_02291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02291 PF07694 5TMR of 5TMR-LYT J156_02293 PF03797 Autotransporter beta-domain J156_02293 PF00082 Subtilase family J156_02294 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_02295 PF00873 AcrB/AcrD/AcrF family J156_02297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02297 PF08448 PAS fold J156_02297 PF13426 PAS domain J156_02297 PF00072 Response regulator receiver domain J156_02297 PF00512 His Kinase A (phospho-acceptor) domain J156_02298 PF00196 Bacterial regulatory proteins, luxR family J156_02298 PF00072 Response regulator receiver domain J156_02299 PF12951 Passenger-associated-transport-repeat J156_02299 PF12951 Passenger-associated-transport-repeat J156_02300 PF00563 EAL domain J156_02300 PF08448 PAS fold J156_02300 PF08447 PAS fold J156_02300 PF00990 Diguanylate cyclase, GGDEF domain J156_02303 PF05974 Domain of unknown function (DUF892) J156_02305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J156_02307 PF10414 Sirohaem synthase dimerisation region J156_02307 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J156_02307 PF14824 Sirohaem biosynthesis protein central J156_02310 PF05977 Transmembrane secretion effector J156_02311 PF07969 Amidohydrolase family J156_02313 PF00857 Isochorismatase family J156_02316 PF00196 Bacterial regulatory proteins, luxR family J156_02316 PF00072 Response regulator receiver domain J156_02319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_02319 PF03466 LysR substrate binding domain J156_02320 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J156_02320 PF00361 Proton-conducting membrane transporter J156_02320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J156_02321 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J156_02322 PF13333 Integrase core domain J156_02322 PF13276 HTH-like domain J156_02322 PF00665 Integrase core domain J156_02323 PF01527 Transposase J156_02324 PF01381 Helix-turn-helix J156_02325 PF05284 Protein of unknown function (DUF736) J156_02326 PF04002 RadC-like JAB domain J156_02331 PF13356 Arm DNA-binding domain J156_02331 PF00589 Phage integrase family J156_02334 PF07715 TonB-dependent Receptor Plug Domain J156_02334 PF00593 TonB dependent receptor J156_02338 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J156_02343 PF00593 TonB dependent receptor J156_02343 PF07715 TonB-dependent Receptor Plug Domain J156_02346 PF10947 Protein of unknown function (DUF2628) J156_02348 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J156_02348 PF00722 Glycosyl hydrolases family 16 J156_02353 PF00005 ABC transporter J156_02353 PF00664 ABC transporter transmembrane region J156_02353 PF03412 Peptidase C39 family J156_02355 PF13614 AAA domain J156_02363 PF01131 DNA topoisomerase J156_02363 PF01751 Toprim domain J156_02364 PF00145 C-5 cytosine-specific DNA methylase J156_02376 PF17761 DUF1016 N-terminal domain J156_02376 PF06250 YhcG PDDEXK nuclease domain J156_02377 PF01527 Transposase J156_02378 PF13276 HTH-like domain J156_02378 PF00665 Integrase core domain J156_02378 PF13333 Integrase core domain J156_02379 PF00892 EamA-like transporter family J156_02380 PF00892 EamA-like transporter family J156_02382 PF02525 Flavodoxin-like fold J156_02383 PF02798 Glutathione S-transferase, N-terminal domain J156_02383 PF00043 Glutathione S-transferase, C-terminal domain J156_02384 PF05544 Proline racemase J156_02385 PF03358 NADPH-dependent FMN reductase J156_02387 PF07690 Major Facilitator Superfamily J156_02388 PF12833 Helix-turn-helix domain J156_02388 PF02311 AraC-like ligand binding domain J156_02418 PF12462 DNA helicase IV / RNA helicase N terminal J156_02418 PF00580 UvrD/REP helicase N-terminal domain J156_02418 PF13361 UvrD-like helicase C-terminal domain J156_02433 PF03466 LysR substrate binding domain J156_02433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_02434 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J156_02434 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J156_02435 PF03401 Tripartite tricarboxylate transporter family receptor J156_02439 PF04002 RadC-like JAB domain J156_02446 PF00589 Phage integrase family J156_02446 PF13356 Arm DNA-binding domain J156_02447 PF00117 Glutamine amidotransferase class-I J156_02447 PF00958 GMP synthase C terminal domain J156_02447 PF02540 NAD synthase J156_02448 PF00571 CBS domain J156_02448 PF00478 IMP dehydrogenase / GMP reductase domain J156_02449 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J156_02449 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J156_02451 PF00999 Sodium/hydrogen exchanger family J156_02451 PF02254 TrkA-N domain J156_02452 PF00483 Nucleotidyl transferase J156_02453 PF02719 Polysaccharide biosynthesis protein J156_02454 PF00953 Glycosyl transferase family 4 J156_02455 PF18073 Rubredoxin metal binding domain J156_02457 PF00216 Bacterial DNA-binding protein J156_02458 PF00575 S1 RNA binding domain J156_02459 PF02224 Cytidylate kinase J156_02460 PF00444 Ribosomal protein L36 J156_02463 PF04371 Porphyromonas-type peptidyl-arginine deiminase J156_02464 PF00795 Carbon-nitrogen hydrolase J156_02469 PF00528 Binding-protein-dependent transport system inner membrane component J156_02470 PF00528 Binding-protein-dependent transport system inner membrane component J156_02474 PF00356 Bacterial regulatory proteins, lacI family J156_02476 PF03795 YCII-related domain J156_02477 PF02616 Segregation and condensation protein ScpA J156_02478 PF04079 Segregation and condensation complex subunit ScpB J156_02479 PF01479 S4 domain J156_02479 PF00849 RNA pseudouridylate synthase J156_02482 PF00795 Carbon-nitrogen hydrolase J156_02483 PF00155 Aminotransferase class I and II J156_02484 PF00005 ABC transporter J156_02485 PF03379 CcmB protein J156_02486 PF01578 Cytochrome C assembly protein J156_02488 PF03100 CcmE J156_02489 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J156_02489 PF01578 Cytochrome C assembly protein J156_02490 PF08534 Redoxin J156_02491 PF03918 Cytochrome C biogenesis protein J156_02493 PF00561 alpha/beta hydrolase fold J156_02494 PF00313 'Cold-shock' DNA-binding domain J156_02495 PF00005 ABC transporter J156_02495 PF00664 ABC transporter transmembrane region J156_02496 PF00005 ABC transporter J156_02496 PF00664 ABC transporter transmembrane region J156_02497 PF01654 Cytochrome bd terminal oxidase subunit I J156_02498 PF02322 Cytochrome bd terminal oxidase subunit II J156_02502 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J156_02502 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J156_02503 PF00171 Aldehyde dehydrogenase family J156_02504 PF00696 Amino acid kinase family J156_02504 PF01472 PUA domain J156_02506 PF00206 Lyase J156_02507 PF01118 Semialdehyde dehydrogenase, NAD binding domain J156_02509 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J156_02509 PF00696 Amino acid kinase family J156_02512 PF00764 Arginosuccinate synthase J156_02513 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J156_02513 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J156_02515 PF09190 DALR domain J156_02515 PF01406 tRNA synthetases class I (C) catalytic domain J156_02516 PF02657 Fe-S metabolism associated domain J156_02518 PF01258 Prokaryotic dksA/traR C4-type zinc finger J156_02519 PF01809 Putative membrane protein insertion efficiency factor J156_02520 PF01979 Amidohydrolase family J156_02521 PF08460 Bacterial SH3 domain J156_02521 PF01551 Peptidase family M23 J156_02524 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J156_02525 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J156_02527 PF00753 Metallo-beta-lactamase superfamily J156_02531 PF01527 Transposase J156_02534 PF00295 Glycosyl hydrolases family 28 J156_02536 PF13419 Haloacid dehalogenase-like hydrolase J156_02538 PF01979 Amidohydrolase family J156_02540 PF01132 Elongation factor P (EF-P) OB domain J156_02540 PF09285 Elongation factor P, C-terminal J156_02540 PF08207 Elongation factor P (EF-P) KOW-like domain J156_02541 PF04055 Radical SAM superfamily J156_02542 PF00563 EAL domain J156_02542 PF00990 Diguanylate cyclase, GGDEF domain J156_02542 PF13188 PAS domain J156_02542 PF03707 Bacterial signalling protein N terminal repeat J156_02544 PF00588 SpoU rRNA Methylase family J156_02545 PF00459 Inositol monophosphatase family J156_02546 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J156_02546 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J156_02547 PF00545 ribonuclease J156_02550 PF00271 Helicase conserved C-terminal domain J156_02550 PF00270 DEAD/DEAH box helicase J156_02550 PF03880 DbpA RNA binding domain J156_02551 PF00156 Phosphoribosyl transferase domain J156_02552 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J156_02553 PF00135 Carboxylesterase family J156_02554 PF14497 Glutathione S-transferase, C-terminal domain J156_02554 PF02798 Glutathione S-transferase, N-terminal domain J156_02555 PF00313 'Cold-shock' DNA-binding domain J156_02556 PF07152 YaeQ protein J156_02558 PF00563 EAL domain J156_02558 PF00072 Response regulator receiver domain J156_02558 PF00990 Diguanylate cyclase, GGDEF domain J156_02559 PF01435 Peptidase family M48 J156_02560 PF00749 tRNA synthetases class I (E and Q), catalytic domain J156_02561 PF00106 short chain dehydrogenase J156_02562 PF05233 PHB accumulation regulatory domain J156_02562 PF07879 PHB/PHA accumulation regulator DNA-binding domain J156_02565 PF01119 DNA mismatch repair protein, C-terminal domain J156_02565 PF08676 MutL C terminal dimerisation domain J156_02566 PF11741 AMIN domain J156_02566 PF01520 N-acetylmuramoyl-L-alanine amidase J156_02567 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J156_02568 PF03853 YjeF-related protein N-terminus J156_02568 PF01256 Carbohydrate kinase J156_02569 PF08331 Domain of unknown function (DUF1730) J156_02570 PF13742 OB-fold nucleic acid binding domain J156_02570 PF02601 Exonuclease VII, large subunit J156_02572 PF03781 Sulfatase-modifying factor enzyme 1 J156_02573 PF00570 HRDC domain J156_02573 PF01612 3'-5' exonuclease J156_02575 PF13298 DNA polymerase Ligase (LigD) J156_02575 PF04679 ATP dependent DNA ligase C terminal region J156_02575 PF01068 ATP dependent DNA ligase domain J156_02579 PF00589 Phage integrase family J156_02583 PF05598 Transposase domain (DUF772) J156_02585 PF01527 Transposase J156_02589 PF00171 Aldehyde dehydrogenase family J156_02589 PF01619 Proline dehydrogenase J156_02589 PF14850 DNA-binding domain of Proline dehydrogenase J156_02589 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J156_02591 PF01527 Transposase J156_02593 PF13333 Integrase core domain J156_02593 PF00665 Integrase core domain J156_02593 PF13276 HTH-like domain J156_02595 PF00239 Resolvase, N terminal domain J156_02595 PF02796 Helix-turn-helix domain of resolvase J156_02598 PF02384 N-6 DNA Methylase J156_02599 PF09572 XamI restriction endonuclease J156_02611 PF01584 CheW-like domain J156_02612 PF12729 Four helix bundle sensory module for signal transduction J156_02612 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_02612 PF00672 HAMP domain J156_02613 PF02245 Methylpurine-DNA glycosylase (MPG) J156_02614 PF00271 Helicase conserved C-terminal domain J156_02614 PF00270 DEAD/DEAH box helicase J156_02614 PF08494 DEAD/H associated J156_02617 PF04386 Stringent starvation protein B J156_02618 PF02798 Glutathione S-transferase, N-terminal domain J156_02618 PF00043 Glutathione S-transferase, C-terminal domain J156_02619 PF02167 Cytochrome C1 family J156_02620 PF00033 Cytochrome b/b6/petB J156_02620 PF00032 Cytochrome b(C-terminal)/b6/petD J156_02621 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J156_02621 PF00355 Rieske [2Fe-2S] domain J156_02622 PF01464 Transglycosylase SLT domain J156_02625 PF00919 Uncharacterized protein family UPF0004 J156_02625 PF01938 TRAM domain J156_02625 PF04055 Radical SAM superfamily J156_02626 PF02562 PhoH-like protein J156_02628 PF02130 Uncharacterized protein family UPF0054 J156_02630 PF03471 Transporter associated domain J156_02630 PF00571 CBS domain J156_02633 PF00171 Aldehyde dehydrogenase family J156_02634 PF00528 Binding-protein-dependent transport system inner membrane component J156_02635 PF00528 Binding-protein-dependent transport system inner membrane component J156_02636 PF00005 ABC transporter J156_02636 PF08402 TOBE domain J156_02637 PF02321 Outer membrane efflux protein J156_02638 PF07690 Major Facilitator Superfamily J156_02639 PF13533 Biotin-lipoyl like J156_02640 PF13416 Bacterial extracellular solute-binding protein J156_02641 PF00202 Aminotransferase class-III J156_02642 PF00120 Glutamine synthetase, catalytic domain J156_02643 PF07722 Peptidase C26 J156_02644 PF00120 Glutamine synthetase, catalytic domain J156_02645 PF01266 FAD dependent oxidoreductase J156_02646 PF00990 Diguanylate cyclase, GGDEF domain J156_02646 PF00072 Response regulator receiver domain J156_02647 PF01814 Hemerythrin HHE cation binding domain J156_02648 PF07690 Major Facilitator Superfamily J156_02648 PF00083 Sugar (and other) transporter J156_02650 PF00384 Molybdopterin oxidoreductase J156_02651 PF02634 FdhD/NarQ family J156_02652 PF07690 Major Facilitator Superfamily J156_02653 PF00202 Aminotransferase class-III J156_02655 PF04286 Protein of unknown function (DUF445) J156_02656 PF00512 His Kinase A (phospho-acceptor) domain J156_02656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02656 PF01627 Hpt domain J156_02656 PF00072 Response regulator receiver domain J156_02656 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J156_02656 PF00672 HAMP domain J156_02657 PF00072 Response regulator receiver domain J156_02658 PF07690 Major Facilitator Superfamily J156_02659 PF05088 Bacterial NAD-glutamate dehydrogenase J156_02661 PF00529 HlyD membrane-fusion protein of T1SS J156_02661 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_02662 PF00873 AcrB/AcrD/AcrF family J156_02663 PF00356 Bacterial regulatory proteins, lacI family J156_02664 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J156_02664 PF00381 PTS HPr component phosphorylation site J156_02664 PF05524 PEP-utilising enzyme, N-terminal J156_02664 PF00391 PEP-utilising enzyme, mobile domain J156_02664 PF02896 PEP-utilising enzyme, TIM barrel domain J156_02665 PF00294 pfkB family carbohydrate kinase J156_02666 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J156_02674 PF07549 SecD/SecF GG Motif J156_02674 PF02355 Protein export membrane protein J156_02675 PF02355 Protein export membrane protein J156_02675 PF07549 SecD/SecF GG Motif J156_02675 PF13721 SecD export protein N-terminal TM region J156_02676 PF02699 Preprotein translocase subunit J156_02677 PF01702 Queuine tRNA-ribosyltransferase J156_02678 PF02547 Queuosine biosynthesis protein J156_02687 PF00759 Glycosyl hydrolase family 9 J156_02687 PF02927 Cellulase N-terminal ig-like domain J156_02689 PF00037 4Fe-4S binding domain J156_02692 PF01467 Cytidylyltransferase-like J156_02694 PF00183 Hsp90 protein J156_02694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02698 PF07715 TonB-dependent Receptor Plug Domain J156_02698 PF00593 TonB dependent receptor J156_02700 PF04616 Glycosyl hydrolases family 43 J156_02701 PF07532 Bacterial Ig-like domain (group 4) J156_02702 PF07715 TonB-dependent Receptor Plug Domain J156_02702 PF00593 TonB dependent receptor J156_02704 PF00082 Subtilase family J156_02704 PF09286 Pro-kumamolisin, activation domain J156_02710 PF13520 Amino acid permease J156_02713 PF01321 Creatinase/Prolidase N-terminal domain J156_02713 PF00557 Metallopeptidase family M24 J156_02714 PF00171 Aldehyde dehydrogenase family J156_02715 PF00701 Dihydrodipicolinate synthetase family J156_02716 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_02716 PF04324 BFD-like [2Fe-2S] binding domain J156_02718 PF01266 FAD dependent oxidoreductase J156_02719 PF05544 Proline racemase J156_02721 PF00448 SRP54-type protein, GTPase domain J156_02721 PF02881 SRP54-type protein, helical bundle domain J156_02722 PF14815 NUDIX domain J156_02722 PF00730 HhH-GPD superfamily base excision DNA repair protein J156_02722 PF00633 Helix-hairpin-helix motif J156_02722 PF10576 Iron-sulfur binding domain of endonuclease III J156_02723 PF04362 Bacterial Fe(2+) trafficking J156_02724 PF13426 PAS domain J156_02724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02724 PF00072 Response regulator receiver domain J156_02730 PF08212 Lipocalin-like domain J156_02732 PF12806 Acetyl-CoA dehydrogenase C-terminal like J156_02732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_02732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_02732 PF02770 Acyl-CoA dehydrogenase, middle domain J156_02734 PF02780 Transketolase, C-terminal domain J156_02734 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J156_02734 PF02779 Transketolase, pyrimidine binding domain J156_02738 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J156_02739 PF16123 Hydroxyacylglutathione hydrolase C-terminus J156_02739 PF00753 Metallo-beta-lactamase superfamily J156_02740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J156_02740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J156_02743 PF03808 Glycosyl transferase WecB/TagA/CpsF family J156_02746 PF14667 Polysaccharide biosynthesis C-terminal domain J156_02748 PF00534 Glycosyl transferases group 1 J156_02748 PF13439 Glycosyltransferase Family 4 J156_02752 PF02397 Bacterial sugar transferase J156_02756 PF13411 MerR HTH family regulatory protein J156_02757 PF00216 Bacterial DNA-binding protein J156_02758 PF03147 Ferredoxin-fold anticodon binding domain J156_02758 PF03484 tRNA synthetase B5 domain J156_02758 PF03483 B3/4 domain J156_02758 PF01588 Putative tRNA binding domain J156_02758 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J156_02759 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J156_02759 PF01409 tRNA synthetases class II core domain (F) J156_02760 PF00453 Ribosomal protein L20 J156_02761 PF01632 Ribosomal protein L35 J156_02763 PF05198 Translation initiation factor IF-3, N-terminal domain J156_02763 PF00707 Translation initiation factor IF-3, C-terminal domain J156_02764 PF03129 Anticodon binding domain J156_02764 PF02824 TGS domain J156_02764 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J156_02764 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J156_02765 PF00356 Bacterial regulatory proteins, lacI family J156_02766 PF00686 Starch binding domain J156_02766 PF00128 Alpha amylase, catalytic domain J156_02767 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J156_02769 PF10566 Glycoside hydrolase 97 J156_02769 PF14508 Glycosyl-hydrolase 97 N-terminal J156_02769 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J156_02773 PF00128 Alpha amylase, catalytic domain J156_02775 PF01527 Transposase J156_02784 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J156_02787 PF01464 Transglycosylase SLT domain J156_02788 PF00437 Type II/IV secretion system protein J156_02789 PF03743 Bacterial conjugation TrbI-like protein J156_02793 PF02534 Type IV secretory system Conjugative DNA transfer J156_02796 PF00271 Helicase conserved C-terminal domain J156_02796 PF04851 Type III restriction enzyme, res subunit J156_02796 PF02151 UvrB/uvrC motif J156_02796 PF12344 Ultra-violet resistance protein B J156_02796 PF17757 UvrB interaction domain J156_02804 PF01527 Transposase J156_02805 PF13333 Integrase core domain J156_02805 PF00665 Integrase core domain J156_02805 PF13276 HTH-like domain J156_02811 PF01555 DNA methylase J156_02821 PF00182 Chitinase class I J156_02831 PF13333 Integrase core domain J156_02831 PF00665 Integrase core domain J156_02831 PF13276 HTH-like domain J156_02832 PF01527 Transposase J156_02833 PF07963 Prokaryotic N-terminal methylation motif J156_02833 PF00114 Pilin (bacterial filament) J156_02834 PF05567 Neisseria PilC beta-propeller domain J156_02837 PF06580 Histidine kinase J156_02837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02837 PF07694 5TMR of 5TMR-LYT J156_02838 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J156_02838 PF03641 Possible lysine decarboxylase J156_02838 PF11892 Domain of unknown function (DUF3412) J156_02839 PF00593 TonB dependent receptor J156_02840 PF01914 MarC family integral membrane protein J156_02842 PF00462 Glutaredoxin J156_02843 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J156_02843 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J156_02844 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J156_02844 PF02222 ATP-grasp domain J156_02845 PF00731 AIR carboxylase J156_02847 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J156_02847 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J156_02849 PF00013 KH domain J156_02849 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J156_02849 PF01138 3' exoribonuclease family, domain 1 J156_02849 PF03725 3' exoribonuclease family, domain 2 J156_02849 PF00575 S1 RNA binding domain J156_02850 PF00312 Ribosomal protein S15 J156_02851 PF01509 TruB family pseudouridylate synthase (N terminal domain) J156_02851 PF16198 tRNA pseudouridylate synthase B C-terminal domain J156_02851 PF09157 Pseudouridine synthase II TruB, C-terminal J156_02852 PF02033 Ribosome-binding factor A J156_02853 PF08364 Bacterial translation initiation factor IF-2 associated region J156_02853 PF04760 Translation initiation factor IF-2, N-terminal region J156_02853 PF11987 Translation-initiation factor 2 J156_02853 PF00009 Elongation factor Tu GTP binding domain J156_02854 PF08529 NusA N-terminal domain J156_02854 PF00575 S1 RNA binding domain J156_02854 PF13184 NusA-like KH domain J156_02855 PF17384 RimP C-terminal SH3 domain J156_02855 PF02576 RimP N-terminal domain J156_02857 PF00361 Proton-conducting membrane transporter J156_02858 PF00361 Proton-conducting membrane transporter J156_02858 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J156_02859 PF00361 Proton-conducting membrane transporter J156_02859 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J156_02860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J156_02861 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J156_02862 PF12838 4Fe-4S dicluster domain J156_02863 PF00146 NADH dehydrogenase J156_02864 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J156_02864 PF00384 Molybdopterin oxidoreductase J156_02864 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J156_02865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J156_02865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J156_02865 PF10531 SLBB domain J156_02867 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J156_02868 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J156_02869 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J156_02870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J156_02873 PF00121 Triosephosphate isomerase J156_02874 PF00106 short chain dehydrogenase J156_02877 PF00990 Diguanylate cyclase, GGDEF domain J156_02877 PF03707 Bacterial signalling protein N terminal repeat J156_02877 PF00563 EAL domain J156_02880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J156_02880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J156_02880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J156_02880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J156_02881 PF01039 Carboxyl transferase domain J156_02881 PF17848 Acetyl-coA carboxylase zinc finger domain J156_02882 PF00290 Tryptophan synthase alpha chain J156_02884 PF00291 Pyridoxal-phosphate dependent enzyme J156_02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_02885 PF03466 LysR substrate binding domain J156_02886 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J156_02887 PF01416 tRNA pseudouridine synthase J156_02891 PF01118 Semialdehyde dehydrogenase, NAD binding domain J156_02891 PF02774 Semialdehyde dehydrogenase, dimerisation domain J156_02892 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J156_02892 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J156_02893 PF01264 Chorismate synthase J156_02894 PF05175 Methyltransferase small domain J156_02895 PF02630 SCO1/SenC J156_02896 PF02666 Phosphatidylserine decarboxylase J156_02898 PF05872 Bacterial protein of unknown function (DUF853) J156_02899 PF00293 NUDIX domain J156_02902 PF01272 Transcription elongation factor, GreA/GreB, C-term J156_02902 PF03449 Transcription elongation factor, N-terminal J156_02903 PF04055 Radical SAM superfamily J156_02903 PF18693 TRAM domain J156_02903 PF00919 Uncharacterized protein family UPF0004 J156_02904 PF01738 Dienelactone hydrolase family J156_02908 PF00692 dUTPase J156_02909 PF10609 NUBPL iron-transfer P-loop NTPase J156_02910 PF00593 TonB dependent receptor J156_02910 PF07715 TonB-dependent Receptor Plug Domain J156_02913 PF01431 Peptidase family M13 J156_02913 PF05649 Peptidase family M13 J156_02914 PF01431 Peptidase family M13 J156_02914 PF05649 Peptidase family M13 J156_02917 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J156_02918 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_02918 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J156_02919 PF01266 FAD dependent oxidoreductase J156_02920 PF04235 Protein of unknown function (DUF418) J156_02921 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J156_02922 PF00877 NlpC/P60 family J156_02923 PF00877 NlpC/P60 family J156_02926 PF00375 Sodium:dicarboxylate symporter family J156_02927 PF00245 Alkaline phosphatase J156_02928 PF01171 PP-loop family J156_02928 PF11734 TilS substrate C-terminal domain J156_02928 PF09179 TilS substrate binding domain J156_02929 PF02609 Exonuclease VII small subunit J156_02930 PF00348 Polyprenyl synthetase J156_02931 PF14521 Lysine-specific metallo-endopeptidase J156_02933 PF01523 Putative modulator of DNA gyrase J156_02934 PF04751 Protein of unknown function (DUF615) J156_02935 PF01523 Putative modulator of DNA gyrase J156_02937 PF13502 AsmA-like C-terminal region J156_02937 PF13116 Protein of unknown function J156_02938 PF10150 Ribonuclease E/G family J156_02938 PF00575 S1 RNA binding domain J156_02939 PF02545 Maf-like protein J156_02940 PF04402 Protein of unknown function (DUF541) J156_02943 PF02590 Predicted SPOUT methyltransferase J156_02946 PF01467 Cytidylyltransferase-like J156_02949 PF13603 Leucyl-tRNA synthetase, Domain 2 J156_02949 PF08264 Anticodon-binding domain of tRNA J156_02949 PF00133 tRNA synthetases class I (I, L, M and V) J156_02951 PF00085 Thioredoxin J156_02956 PF04070 Domain of unknown function (DUF378) J156_02957 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J156_02959 PF03466 LysR substrate binding domain J156_02959 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_02964 PF00664 ABC transporter transmembrane region J156_02964 PF00005 ABC transporter J156_02967 PF00873 AcrB/AcrD/AcrF family J156_02970 PF02321 Outer membrane efflux protein J156_02971 PF00486 Transcriptional regulatory protein, C terminal J156_02971 PF00072 Response regulator receiver domain J156_02972 PF00672 HAMP domain J156_02972 PF00512 His Kinase A (phospho-acceptor) domain J156_02972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_02973 PF00999 Sodium/hydrogen exchanger family J156_02974 PF00144 Beta-lactamase J156_02975 PF03737 Aldolase/RraA J156_02978 PF00072 Response regulator receiver domain J156_02978 PF00990 Diguanylate cyclase, GGDEF domain J156_02979 PF01479 S4 domain J156_02979 PF00849 RNA pseudouridylate synthase J156_02980 PF08448 PAS fold J156_02980 PF00563 EAL domain J156_02980 PF00990 Diguanylate cyclase, GGDEF domain J156_02981 PF00271 Helicase conserved C-terminal domain J156_02981 PF00270 DEAD/DEAH box helicase J156_02981 PF03880 DbpA RNA binding domain J156_02991 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J156_02991 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J156_02993 PF00654 Voltage gated chloride channel J156_02994 PF00107 Zinc-binding dehydrogenase J156_02994 PF08240 Alcohol dehydrogenase GroES-like domain J156_02997 PF00593 TonB dependent receptor J156_02997 PF07715 TonB-dependent Receptor Plug Domain J156_02999 PF00082 Subtilase family J156_02999 PF01483 Proprotein convertase P-domain J156_03002 PF00082 Subtilase family J156_03002 PF01483 Proprotein convertase P-domain J156_03004 PF00248 Aldo/keto reductase family J156_03005 PF07690 Major Facilitator Superfamily J156_03006 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03006 PF03466 LysR substrate binding domain J156_03008 PF12833 Helix-turn-helix domain J156_03008 PF06719 AraC-type transcriptional regulator N-terminus J156_03010 PF16859 Tetracyclin repressor-like, C-terminal domain J156_03010 PF00440 Bacterial regulatory proteins, tetR family J156_03011 PF02321 Outer membrane efflux protein J156_03012 PF00873 AcrB/AcrD/AcrF family J156_03013 PF00529 HlyD membrane-fusion protein of T1SS J156_03013 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_03015 PF01475 Ferric uptake regulator family J156_03016 PF00749 tRNA synthetases class I (E and Q), catalytic domain J156_03021 PF06123 Inner membrane protein CreD J156_03023 PF00512 His Kinase A (phospho-acceptor) domain J156_03023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03023 PF00672 HAMP domain J156_03024 PF00072 Response regulator receiver domain J156_03024 PF00486 Transcriptional regulatory protein, C terminal J156_03025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J156_03027 PF00270 DEAD/DEAH box helicase J156_03027 PF02559 CarD-like/TRCF domain J156_03027 PF17757 UvrB interaction domain J156_03027 PF03461 TRCF domain J156_03027 PF00271 Helicase conserved C-terminal domain J156_03034 PF01584 CheW-like domain J156_03034 PF01627 Hpt domain J156_03034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03034 PF02895 Signal transducing histidine kinase, homodimeric domain J156_03034 PF09078 CheY binding J156_03035 PF00672 HAMP domain J156_03035 PF02203 Tar ligand binding domain homologue J156_03035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03036 PF01584 CheW-like domain J156_03037 PF00563 EAL domain J156_03037 PF00990 Diguanylate cyclase, GGDEF domain J156_03037 PF13426 PAS domain J156_03038 PF03705 CheR methyltransferase, all-alpha domain J156_03038 PF01739 CheR methyltransferase, SAM binding domain J156_03039 PF00072 Response regulator receiver domain J156_03039 PF01339 CheB methylesterase J156_03040 PF13091 PLD-like domain J156_03041 PF05649 Peptidase family M13 J156_03041 PF01431 Peptidase family M13 J156_03043 PF00300 Histidine phosphatase superfamily (branch 1) J156_03044 PF04493 Endonuclease V J156_03046 PF05726 Pirin C-terminal cupin domain J156_03046 PF02678 Pirin J156_03049 PF05726 Pirin C-terminal cupin domain J156_03049 PF02678 Pirin J156_03050 PF13722 5TM C-terminal transporter carbon starvation CstA J156_03050 PF02554 Carbon starvation protein CstA J156_03051 PF04328 Selenoprotein, putative J156_03060 PF01527 Transposase J156_03062 PF13478 XdhC Rossmann domain J156_03062 PF02625 XdhC and CoxI family J156_03063 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J156_03063 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J156_03064 PF03450 CO dehydrogenase flavoprotein C-terminal domain J156_03064 PF00941 FAD binding domain in molybdopterin dehydrogenase J156_03065 PF10518 TAT (twin-arginine translocation) pathway signal sequence J156_03065 PF00111 2Fe-2S iron-sulfur cluster binding domain J156_03065 PF01799 [2Fe-2S] binding domain J156_03066 PF00550 Phosphopantetheine attachment site J156_03066 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_03066 PF16197 Ketoacyl-synthetase C-terminal extension J156_03066 PF09277 Erythronolide synthase, docking J156_03066 PF00698 Acyl transferase domain J156_03066 PF08990 Erythronolide synthase docking J156_03066 PF14765 Polyketide synthase dehydratase J156_03066 PF08240 Alcohol dehydrogenase GroES-like domain J156_03066 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_03066 PF08659 KR domain J156_03067 PF00563 EAL domain J156_03067 PF00990 Diguanylate cyclase, GGDEF domain J156_03067 PF00360 Phytochrome region J156_03067 PF01590 GAF domain J156_03068 PF00436 Single-strand binding protein family J156_03069 PF00348 Polyprenyl synthetase J156_03071 PF02875 Mur ligase family, glutamate ligase domain J156_03071 PF08245 Mur ligase middle domain J156_03074 PF00696 Amino acid kinase family J156_03074 PF01842 ACT domain J156_03075 PF02567 Phenazine biosynthesis-like protein J156_03076 PF02567 Phenazine biosynthesis-like protein J156_03078 PF02566 OsmC-like protein J156_03079 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J156_03079 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J156_03080 PF03652 Holliday junction resolvase J156_03081 PF02622 Uncharacterized ACR, COG1678 J156_03082 PF13673 Acetyltransferase (GNAT) domain J156_03082 PF00958 GMP synthase C terminal domain J156_03082 PF00117 Glutamine amidotransferase class-I J156_03082 PF03352 Methyladenine glycosylase J156_03082 PF13302 Acetyltransferase (GNAT) domain J156_03085 PF03211 Pectate lyase J156_03086 PF00437 Type II/IV secretion system protein J156_03087 PF00437 Type II/IV secretion system protein J156_03088 PF01168 Alanine racemase, N-terminal domain J156_03089 PF03807 NADP oxidoreductase coenzyme F420-dependent J156_03089 PF14748 Pyrroline-5-carboxylate reductase dimerisation J156_03091 PF01551 Peptidase family M23 J156_03095 PF01965 DJ-1/PfpI family J156_03097 PF02082 Transcriptional regulator J156_03098 PF01458 Uncharacterized protein family (UPF0051) J156_03099 PF00005 ABC transporter J156_03100 PF01458 Uncharacterized protein family (UPF0051) J156_03101 PF00266 Aminotransferase class-V J156_03103 PF00355 Rieske [2Fe-2S] domain J156_03104 PF07715 TonB-dependent Receptor Plug Domain J156_03104 PF00593 TonB dependent receptor J156_03105 PF13640 2OG-Fe(II) oxygenase superfamily J156_03105 PF18331 PKHD-type hydroxylase C-terminal domain J156_03110 PF02424 ApbE family J156_03111 PF00667 FAD binding domain J156_03111 PF00258 Flavodoxin J156_03111 PF00175 Oxidoreductase NAD-binding domain J156_03115 PF07687 Peptidase dimerisation domain J156_03115 PF01546 Peptidase family M20/M25/M40 J156_03117 PF01636 Phosphotransferase enzyme family J156_03118 PF00483 Nucleotidyl transferase J156_03119 PF00308 Bacterial dnaA protein J156_03120 PF01594 AI-2E family transporter J156_03122 PF02769 AIR synthase related protein, C-terminal domain J156_03122 PF00586 AIR synthase related protein, N-terminal domain J156_03124 PF00551 Formyl transferase J156_03128 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J156_03129 PF01722 BolA-like protein J156_03130 PF01380 SIS domain J156_03130 PF00571 CBS domain J156_03133 PF03968 OstA-like protein J156_03134 PF00005 ABC transporter J156_03135 PF00309 Sigma-54 factor, Activator interacting domain (AID) J156_03135 PF04552 Sigma-54, DNA binding domain J156_03135 PF04963 Sigma-54 factor, core binding domain J156_03136 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J156_03137 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J156_03138 PF07475 HPr Serine kinase C-terminal domain J156_03138 PF02603 HPr Serine kinase N terminus J156_03139 PF03668 P-loop ATPase protein family J156_03141 PF00381 PTS HPr component phosphorylation site J156_03142 PF05524 PEP-utilising enzyme, N-terminal J156_03142 PF02896 PEP-utilising enzyme, TIM barrel domain J156_03142 PF00391 PEP-utilising enzyme, mobile domain J156_03143 PF03448 MgtE intracellular N domain J156_03143 PF00571 CBS domain J156_03143 PF01769 Divalent cation transporter J156_03144 PF00756 Putative esterase J156_03145 PF02322 Cytochrome bd terminal oxidase subunit II J156_03146 PF01654 Cytochrome bd terminal oxidase subunit I J156_03148 PF00324 Amino acid permease J156_03149 PF00544 Pectate lyase J156_03150 PF00561 alpha/beta hydrolase fold J156_03151 PF00196 Bacterial regulatory proteins, luxR family J156_03152 PF00324 Amino acid permease J156_03157 PF12706 Beta-lactamase superfamily domain J156_03158 PF04820 Tryptophan halogenase J156_03163 PF00376 MerR family regulatory protein J156_03163 PF09278 MerR, DNA binding J156_03164 PF07690 Major Facilitator Superfamily J156_03166 PF03738 Glutathionylspermidine synthase preATP-grasp J156_03171 PF04012 PspA/IM30 family J156_03173 PF01243 Pyridoxamine 5'-phosphate oxidase J156_03173 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J156_03174 PF01202 Shikimate kinase J156_03175 PF01761 3-dehydroquinate synthase J156_03177 PF01208 Uroporphyrinogen decarboxylase (URO-D) J156_03190 PF01590 GAF domain J156_03190 PF02954 Bacterial regulatory protein, Fis family J156_03190 PF00158 Sigma-54 interaction domain J156_03191 PF07690 Major Facilitator Superfamily J156_03192 PF17149 Periplasmic sensor domain found in signal transduction proteins J156_03192 PF00672 HAMP domain J156_03192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03192 PF00512 His Kinase A (phospho-acceptor) domain J156_03192 PF01627 Hpt domain J156_03192 PF00072 Response regulator receiver domain J156_03193 PF17149 Periplasmic sensor domain found in signal transduction proteins J156_03193 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03193 PF00512 His Kinase A (phospho-acceptor) domain J156_03193 PF01627 Hpt domain J156_03193 PF00072 Response regulator receiver domain J156_03193 PF00672 HAMP domain J156_03195 PF00512 His Kinase A (phospho-acceptor) domain J156_03195 PF01627 Hpt domain J156_03195 PF00072 Response regulator receiver domain J156_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03196 PF04264 YceI-like domain J156_03200 PF03313 Serine dehydratase alpha chain J156_03200 PF03315 Serine dehydratase beta chain J156_03201 PF12697 Alpha/beta hydrolase family J156_03202 PF00696 Amino acid kinase family J156_03202 PF00742 Homoserine dehydrogenase J156_03202 PF03447 Homoserine dehydrogenase, NAD binding domain J156_03203 PF01053 Cys/Met metabolism PLP-dependent enzyme J156_03204 PF00561 alpha/beta hydrolase fold J156_03206 PF01476 LysM domain J156_03206 PF08525 Opacity-associated protein A N-terminal motif J156_03206 PF01551 Peptidase family M23 J156_03207 PF00009 Elongation factor Tu GTP binding domain J156_03207 PF16658 Class II release factor RF3, C-terminal domain J156_03208 PF03006 Haemolysin-III related J156_03209 PF05170 AsmA family J156_03210 PF00571 CBS domain J156_03210 PF00478 IMP dehydrogenase / GMP reductase domain J156_03211 PF00535 Glycosyl transferase family 2 J156_03212 PF00912 Transglycosylase J156_03213 PF01430 Hsp33 protein J156_03215 PF07715 TonB-dependent Receptor Plug Domain J156_03215 PF00593 TonB dependent receptor J156_03217 PF00440 Bacterial regulatory proteins, tetR family J156_03218 PF00561 alpha/beta hydrolase fold J156_03219 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J156_03219 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J156_03219 PF09317 Domain of unknown function (DUF1974) J156_03224 PF01597 Glycine cleavage H-protein J156_03225 PF01571 Aminomethyltransferase folate-binding domain J156_03225 PF08669 Glycine cleavage T-protein C-terminal barrel domain J156_03227 PF16200 C-terminal region of band_7 J156_03227 PF01145 SPFH domain / Band 7 family J156_03228 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J156_03229 PF03819 MazG nucleotide pyrophosphohydrolase domain J156_03230 PF00459 Inositol monophosphatase family J156_03231 PF00293 NUDIX domain J156_03232 PF00202 Aminotransferase class-III J156_03233 PF04452 RNA methyltransferase J156_03234 PF02685 Glucokinase J156_03237 PF00704 Glycosyl hydrolases family 18 J156_03237 PF01476 LysM domain J156_03238 PF07691 PA14 domain J156_03238 PF02838 Glycosyl hydrolase family 20, domain 2 J156_03238 PF00728 Glycosyl hydrolase family 20, catalytic domain J156_03240 PF14310 Fibronectin type III-like domain J156_03240 PF01915 Glycosyl hydrolase family 3 C-terminal domain J156_03240 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_03240 PF07691 PA14 domain J156_03242 PF01301 Glycosyl hydrolases family 35 J156_03243 PF13520 Amino acid permease J156_03245 PF11975 Family 4 glycosyl hydrolase C-terminal domain J156_03245 PF02056 Family 4 glycosyl hydrolase J156_03247 PF17678 Glycosyl hydrolase family 92 N-terminal domain J156_03247 PF07971 Glycosyl hydrolase family 92 J156_03248 PF01301 Glycosyl hydrolases family 35 J156_03254 PF03932 CutC family J156_03255 PF01112 Asparaginase J156_03256 PF13302 Acetyltransferase (GNAT) domain J156_03259 PF01584 CheW-like domain J156_03259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03259 PF01627 Hpt domain J156_03259 PF00072 Response regulator receiver domain J156_03260 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J156_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03262 PF00072 Response regulator receiver domain J156_03263 PF00072 Response regulator receiver domain J156_03264 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J156_03264 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J156_03266 PF03747 ADP-ribosylglycohydrolase J156_03267 PF00814 Glycoprotease family J156_03268 PF13307 Helicase C-terminal domain J156_03268 PF04851 Type III restriction enzyme, res subunit J156_03270 PF00905 Penicillin binding protein transpeptidase domain J156_03270 PF14814 Bifunctional transglycosylase second domain J156_03270 PF00912 Transglycosylase J156_03271 PF00535 Glycosyl transferase family 2 J156_03273 PF02824 TGS domain J156_03273 PF04607 Region found in RelA / SpoT proteins J156_03273 PF13291 ACT domain J156_03274 PF12706 Beta-lactamase superfamily domain J156_03275 PF03070 TENA/THI-4/PQQC family J156_03276 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J156_03277 PF04055 Radical SAM superfamily J156_03277 PF13186 Iron-sulfur cluster-binding domain J156_03280 PF02685 Glucokinase J156_03282 PF00270 DEAD/DEAH box helicase J156_03282 PF04408 Helicase associated domain (HA2) J156_03282 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J156_03282 PF11898 Domain of unknown function (DUF3418) J156_03282 PF00271 Helicase conserved C-terminal domain J156_03283 PF00210 Ferritin-like domain J156_03284 PF00271 Helicase conserved C-terminal domain J156_03284 PF16124 RecQ zinc-binding J156_03284 PF00570 HRDC domain J156_03284 PF00270 DEAD/DEAH box helicase J156_03284 PF09382 RQC domain J156_03291 PF00672 HAMP domain J156_03291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03291 PF02203 Tar ligand binding domain homologue J156_03295 PF13581 Histidine kinase-like ATPase domain J156_03295 PF13426 PAS domain J156_03295 PF07536 HWE histidine kinase J156_03296 PF06508 Queuosine biosynthesis protein QueC J156_03298 PF04055 Radical SAM superfamily J156_03300 PF00691 OmpA family J156_03301 PF07676 WD40-like Beta Propeller Repeat J156_03301 PF04052 TolB amino-terminal domain J156_03303 PF02472 Biopolymer transport protein ExbD/TolR J156_03304 PF01618 MotA/TolQ/ExbB proton channel family J156_03305 PF03061 Thioesterase superfamily J156_03306 PF17864 RuvB AAA lid domain J156_03306 PF05496 Holliday junction DNA helicase RuvB P-loop domain J156_03306 PF05491 RuvB C-terminal winged helix domain J156_03308 PF02705 K+ potassium transporter J156_03309 PF01330 RuvA N terminal domain J156_03309 PF07499 RuvA, C-terminal domain J156_03310 PF02075 Crossover junction endodeoxyribonuclease RuvC J156_03311 PF01709 Transcriptional regulator J156_03314 PF02938 GAD domain J156_03314 PF00152 tRNA synthetases class II (D, K and N) J156_03314 PF01336 OB-fold nucleic acid binding domain J156_03317 PF07690 Major Facilitator Superfamily J156_03320 PF04185 Phosphoesterase family J156_03320 PF05506 Domain of unknown function (DUF756) J156_03323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03323 PF03466 LysR substrate binding domain J156_03325 PF00005 ABC transporter J156_03325 PF12848 ABC transporter J156_03326 PF07715 TonB-dependent Receptor Plug Domain J156_03326 PF00593 TonB dependent receptor J156_03328 PF00593 TonB dependent receptor J156_03328 PF07715 TonB-dependent Receptor Plug Domain J156_03329 PF00593 TonB dependent receptor J156_03329 PF07715 TonB-dependent Receptor Plug Domain J156_03330 PF00067 Cytochrome P450 J156_03331 PF02254 TrkA-N domain J156_03331 PF00999 Sodium/hydrogen exchanger family J156_03336 PF07660 Secretin and TonB N terminus short domain J156_03336 PF07715 TonB-dependent Receptor Plug Domain J156_03336 PF00593 TonB dependent receptor J156_03338 PF04183 IucA / IucC family J156_03338 PF06276 Ferric iron reductase FhuF-like transporter J156_03339 PF07690 Major Facilitator Superfamily J156_03341 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J156_03341 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J156_03344 PF02654 Cobalamin-5-phosphate synthase J156_03346 PF02277 Phosphoribosyltransferase J156_03347 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J156_03348 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J156_03348 PF07685 CobB/CobQ-like glutamine amidotransferase domain J156_03349 PF00155 Aminotransferase class I and II J156_03350 PF03186 CobD/Cbib protein J156_03350 PF17113 Regulatory signalling modulator protein AmpE J156_03351 PF12557 Cob(I)alamin adenosyltransferase N terminal J156_03351 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J156_03354 PF00593 TonB dependent receptor J156_03354 PF07715 TonB-dependent Receptor Plug Domain J156_03356 PF07724 AAA domain (Cdc48 subfamily) J156_03356 PF10431 C-terminal, D2-small domain, of ClpB protein J156_03356 PF02861 Clp amino terminal domain, pathogenicity island component J156_03356 PF17871 AAA lid domain J156_03356 PF00004 ATPase family associated with various cellular activities (AAA) J156_03357 PF00005 ABC transporter J156_03358 PF00528 Binding-protein-dependent transport system inner membrane component J156_03359 PF09084 NMT1/THI5 like J156_03360 PF00248 Aldo/keto reductase family J156_03362 PF00593 TonB dependent receptor J156_03362 PF07715 TonB-dependent Receptor Plug Domain J156_03363 PF01541 GIY-YIG catalytic domain J156_03370 PF07715 TonB-dependent Receptor Plug Domain J156_03370 PF00593 TonB dependent receptor J156_03371 PF02358 Trehalose-phosphatase J156_03372 PF00723 Glycosyl hydrolases family 15 J156_03373 PF00982 Glycosyltransferase family 20 J156_03374 PF01011 PQQ enzyme repeat J156_03375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03375 PF00672 HAMP domain J156_03375 PF02203 Tar ligand binding domain homologue J156_03376 PF04134 Protein of unknown function, DUF393 J156_03379 PF00849 RNA pseudouridylate synthase J156_03380 PF13525 Outer membrane lipoprotein J156_03382 PF02540 NAD synthase J156_03382 PF00795 Carbon-nitrogen hydrolase J156_03384 PF01527 Transposase J156_03385 PF13276 HTH-like domain J156_03385 PF13333 Integrase core domain J156_03385 PF00665 Integrase core domain J156_03388 PF13406 Transglycosylase SLT domain J156_03389 PF13700 Domain of unknown function (DUF4158) J156_03389 PF01526 Tn3 transposase DDE domain J156_03393 PF01129 NAD:arginine ADP-ribosyltransferase J156_03398 PF00549 CoA-ligase J156_03398 PF02629 CoA binding domain J156_03399 PF00549 CoA-ligase J156_03399 PF08442 ATP-grasp domain J156_03400 PF00512 His Kinase A (phospho-acceptor) domain J156_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03401 PF00158 Sigma-54 interaction domain J156_03401 PF00072 Response regulator receiver domain J156_03401 PF02954 Bacterial regulatory protein, Fis family J156_03403 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J156_03403 PF00437 Type II/IV secretion system protein J156_03404 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J156_03404 PF00437 Type II/IV secretion system protein J156_03405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J156_03405 PF00437 Type II/IV secretion system protein J156_03406 PF07963 Prokaryotic N-terminal methylation motif J156_03406 PF00114 Pilin (bacterial filament) J156_03407 PF07963 Prokaryotic N-terminal methylation motif J156_03407 PF00114 Pilin (bacterial filament) J156_03408 PF00482 Type II secretion system (T2SS), protein F J156_03409 PF01478 Type IV leader peptidase family J156_03409 PF06750 Bacterial Peptidase A24 N-terminal domain J156_03410 PF01121 Dephospho-CoA kinase J156_03413 PF01527 Transposase J156_03414 PF13333 Integrase core domain J156_03414 PF00665 Integrase core domain J156_03414 PF13276 HTH-like domain J156_03415 PF00512 His Kinase A (phospho-acceptor) domain J156_03415 PF00989 PAS fold J156_03415 PF16736 Single Cache-like J156_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03416 PF00486 Transcriptional regulatory protein, C terminal J156_03416 PF00072 Response regulator receiver domain J156_03418 PF18030 RimK PreATP-grasp domain J156_03418 PF08443 RimK-like ATP-grasp domain J156_03419 PF00128 Alpha amylase, catalytic domain J156_03419 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J156_03432 PF04002 RadC-like JAB domain J156_03437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03437 PF13426 PAS domain J156_03437 PF00072 Response regulator receiver domain J156_03438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03438 PF13426 PAS domain J156_03438 PF00072 Response regulator receiver domain J156_03444 PF01527 Transposase J156_03453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03453 PF00512 His Kinase A (phospho-acceptor) domain J156_03453 PF08448 PAS fold J156_03453 PF13188 PAS domain J156_03453 PF00072 Response regulator receiver domain J156_03457 PF13676 TIR domain J156_03461 PF03797 Autotransporter beta-domain J156_03461 PF00657 GDSL-like Lipase/Acylhydrolase J156_03463 PF05690 Thiazole biosynthesis protein ThiG J156_03464 PF02390 Putative methyltransferase J156_03465 PF02080 TrkA-C domain J156_03465 PF03600 Citrate transporter J156_03468 PF01557 Fumarylacetoacetate (FAA) hydrolase family J156_03469 PF01741 Large-conductance mechanosensitive channel, MscL J156_03471 PF00356 Bacterial regulatory proteins, lacI family J156_03473 PF00703 Glycosyl hydrolases family 2 J156_03473 PF02837 Glycosyl hydrolases family 2, sugar binding domain J156_03473 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J156_03474 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J156_03474 PF14508 Glycosyl-hydrolase 97 N-terminal J156_03474 PF10566 Glycoside hydrolase 97 J156_03476 PF00135 Carboxylesterase family J156_03477 PF08032 RNA 2'-O ribose methyltransferase substrate binding J156_03477 PF00588 SpoU rRNA Methylase family J156_03479 PF01433 Peptidase family M1 domain J156_03479 PF11838 ERAP1-like C-terminal domain J156_03481 PF13333 Integrase core domain J156_03481 PF00665 Integrase core domain J156_03481 PF13276 HTH-like domain J156_03482 PF01527 Transposase J156_03488 PF00873 AcrB/AcrD/AcrF family J156_03489 PF00529 HlyD membrane-fusion protein of T1SS J156_03489 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_03490 PF00009 Elongation factor Tu GTP binding domain J156_03491 PF01507 Phosphoadenosine phosphosulfate reductase family J156_03492 PF00175 Oxidoreductase NAD-binding domain J156_03492 PF00667 FAD binding domain J156_03492 PF00258 Flavodoxin J156_03493 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J156_03493 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J156_03494 PF01507 Phosphoadenosine phosphosulfate reductase family J156_03498 PF00512 His Kinase A (phospho-acceptor) domain J156_03498 PF01627 Hpt domain J156_03498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03498 PF00072 Response regulator receiver domain J156_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03500 PF03466 LysR substrate binding domain J156_03501 PF14824 Sirohaem biosynthesis protein central J156_03501 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J156_03501 PF10414 Sirohaem synthase dimerisation region J156_03502 PF00291 Pyridoxal-phosphate dependent enzyme J156_03504 PF01661 Macro domain J156_03505 PF00274 Fructose-bisphosphate aldolase class-I J156_03506 PF02887 Pyruvate kinase, alpha/beta domain J156_03506 PF00224 Pyruvate kinase, barrel domain J156_03508 PF00162 Phosphoglycerate kinase J156_03513 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J156_03513 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J156_03515 PF03922 OmpW family J156_03516 PF03922 OmpW family J156_03518 PF00753 Metallo-beta-lactamase superfamily J156_03518 PF04273 Putative phosphatase (DUF442) J156_03520 PF00528 Binding-protein-dependent transport system inner membrane component J156_03521 PF00005 ABC transporter J156_03521 PF03459 TOBE domain J156_03528 PF03734 L,D-transpeptidase catalytic domain J156_03528 PF01476 LysM domain J156_03529 PF01551 Peptidase family M23 J156_03529 PF04225 Opacity-associated protein A LysM-like domain J156_03531 PF00593 TonB dependent receptor J156_03531 PF07715 TonB-dependent Receptor Plug Domain J156_03532 PF12146 Serine aminopeptidase, S33 J156_03533 PF02780 Transketolase, C-terminal domain J156_03533 PF02779 Transketolase, pyrimidine binding domain J156_03533 PF00456 Transketolase, thiamine diphosphate binding domain J156_03534 PF00375 Sodium:dicarboxylate symporter family J156_03536 PF07584 Aerotolerance regulator N-terminal J156_03536 PF00092 von Willebrand factor type A domain J156_03540 PF07726 ATPase family associated with various cellular activities (AAA) J156_03540 PF17863 AAA lid domain J156_03542 PF07660 Secretin and TonB N terminus short domain J156_03542 PF03958 Bacterial type II/III secretion system short domain J156_03542 PF00263 Bacterial type II and III secretion system protein J156_03542 PF11741 AMIN domain J156_03547 PF00905 Penicillin binding protein transpeptidase domain J156_03547 PF17092 Penicillin-binding protein OB-like domain J156_03547 PF00912 Transglycosylase J156_03549 PF00285 Citrate synthase, C-terminal domain J156_03550 PF01197 Ribosomal protein L31 J156_03551 PF01156 Inosine-uridine preferring nucleoside hydrolase J156_03552 PF00271 Helicase conserved C-terminal domain J156_03552 PF00270 DEAD/DEAH box helicase J156_03552 PF17191 RecG wedge domain J156_03553 PF01042 Endoribonuclease L-PSP J156_03554 PF13291 ACT domain J156_03554 PF04607 Region found in RelA / SpoT proteins J156_03554 PF02824 TGS domain J156_03555 PF01192 RNA polymerase Rpb6 J156_03556 PF00625 Guanylate kinase J156_03557 PF08340 Domain of unknown function (DUF1732) J156_03557 PF03755 YicC-like family, N-terminal region J156_03558 PF03725 3' exoribonuclease family, domain 2 J156_03558 PF01138 3' exoribonuclease family, domain 1 J156_03560 PF01725 Ham1 family J156_03561 PF04055 Radical SAM superfamily J156_03561 PF06969 HemN C-terminal domain J156_03564 PF00557 Metallopeptidase family M24 J156_03566 PF00557 Metallopeptidase family M24 J156_03566 PF05195 Aminopeptidase P, N-terminal domain J156_03567 PF03695 Uncharacterised protein family (UPF0149) J156_03569 PF05164 Cell division protein ZapA J156_03571 PF01812 5-formyltetrahydrofolate cyclo-ligase family J156_03573 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J156_03575 PF13369 Transglutaminase-like superfamily J156_03576 PF00301 Rubredoxin J156_03577 PF02581 Thiamine monophosphate synthase J156_03580 PF00202 Aminotransferase class-III J156_03581 PF17874 MalT-like TPR region J156_03581 PF00196 Bacterial regulatory proteins, luxR family J156_03582 PF00127 Copper binding proteins, plastocyanin/azurin family J156_03583 PF00155 Aminotransferase class I and II J156_03585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J156_03585 PF00034 Cytochrome c J156_03586 PF01593 Flavin containing amine oxidoreductase J156_03589 PF00202 Aminotransferase class-III J156_03590 PF00520 Ion transport protein J156_03590 PF00027 Cyclic nucleotide-binding domain J156_03593 PF01569 PAP2 superfamily J156_03594 PF01062 Bestrophin, RFP-TM, chloride channel J156_03596 PF01225 Mur ligase family, catalytic domain J156_03596 PF08245 Mur ligase middle domain J156_03596 PF02875 Mur ligase family, glutamate ligase domain J156_03598 PF00365 Phosphofructokinase J156_03600 PF03030 Inorganic H+ pyrophosphatase J156_03602 PF00719 Inorganic pyrophosphatase J156_03604 PF00593 TonB dependent receptor J156_03604 PF07715 TonB-dependent Receptor Plug Domain J156_03605 PF12833 Helix-turn-helix domain J156_03606 PF00486 Transcriptional regulatory protein, C terminal J156_03606 PF18500 CadC C-terminal domain 1 J156_03607 PF01964 Radical SAM ThiC family J156_03607 PF13667 ThiC-associated domain J156_03609 PF00593 TonB dependent receptor J156_03609 PF07715 TonB-dependent Receptor Plug Domain J156_03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03610 PF00672 HAMP domain J156_03610 PF02203 Tar ligand binding domain homologue J156_03612 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J156_03612 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J156_03613 PF00205 Thiamine pyrophosphate enzyme, central domain J156_03613 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J156_03613 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J156_03615 PF00291 Pyridoxal-phosphate dependent enzyme J156_03616 PF08502 LeuA allosteric (dimerisation) domain J156_03616 PF00682 HMGL-like J156_03617 PF00180 Isocitrate/isopropylmalate dehydrogenase J156_03618 PF00694 Aconitase C-terminal domain J156_03619 PF00330 Aconitase family (aconitate hydratase) J156_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03621 PF17151 Periplasmic sensor domain J156_03621 PF00990 Diguanylate cyclase, GGDEF domain J156_03624 PF02321 Outer membrane efflux protein J156_03625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J156_03626 PF03279 Bacterial lipid A biosynthesis acyltransferase J156_03631 PF03949 Malic enzyme, NAD binding domain J156_03631 PF01515 Phosphate acetyl/butaryl transferase J156_03631 PF00390 Malic enzyme, N-terminal domain J156_03632 PF00375 Sodium:dicarboxylate symporter family J156_03634 PF02743 Cache domain J156_03634 PF00512 His Kinase A (phospho-acceptor) domain J156_03634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03635 PF07690 Major Facilitator Superfamily J156_03637 PF03466 LysR substrate binding domain J156_03637 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03638 PF00248 Aldo/keto reductase family J156_03642 PF00196 Bacterial regulatory proteins, luxR family J156_03642 PF00072 Response regulator receiver domain J156_03644 PF08521 Two-component sensor kinase N-terminal J156_03644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03644 PF00512 His Kinase A (phospho-acceptor) domain J156_03645 PF00486 Transcriptional regulatory protein, C terminal J156_03645 PF00072 Response regulator receiver domain J156_03647 PF03600 Citrate transporter J156_03649 PF00106 short chain dehydrogenase J156_03650 PF00356 Bacterial regulatory proteins, lacI family J156_03653 PF00128 Alpha amylase, catalytic domain J156_03656 PF03193 RsgA GTPase J156_03660 PF07715 TonB-dependent Receptor Plug Domain J156_03660 PF00593 TonB dependent receptor J156_03661 PF01522 Polysaccharide deacetylase J156_03662 PF00462 Glutaredoxin J156_03665 PF01527 Transposase J156_03670 PF02645 Uncharacterised protein, DegV family COG1307 J156_03671 PF01327 Polypeptide deformylase J156_03672 PF03960 ArsC family J156_03675 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J156_03676 PF01270 Glycosyl hydrolases family 8 J156_03677 PF03170 Bacterial cellulose synthase subunit J156_03678 PF07238 PilZ domain J156_03678 PF03552 Cellulose synthase J156_03678 PF00535 Glycosyl transferase family 2 J156_03681 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J156_03681 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J156_03688 PF07715 TonB-dependent Receptor Plug Domain J156_03688 PF00593 TonB dependent receptor J156_03690 PF07702 UTRA domain J156_03690 PF00392 Bacterial regulatory proteins, gntR family J156_03692 PF03958 Bacterial type II/III secretion system short domain J156_03692 PF00263 Bacterial type II and III secretion system protein J156_03694 PF10741 Type II secretion system (T2SS), protein M subtype b J156_03695 PF05137 Fimbrial assembly protein (PilN) J156_03696 PF03934 Type II secretion system (T2SS), protein K J156_03698 PF07963 Prokaryotic N-terminal methylation motif J156_03699 PF12019 Type II transport protein GspH J156_03700 PF08334 Type II secretion system (T2SS), protein G J156_03701 PF00482 Type II secretion system (T2SS), protein F J156_03702 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J156_03702 PF00437 Type II/IV secretion system protein J156_03703 PF00082 Subtilase family J156_03703 PF04151 Bacterial pre-peptidase C-terminal domain J156_03704 PF13018 Extended Signal Peptide of Type V secretion system J156_03704 PF05662 Coiled stalk of trimeric autotransporter adhesin J156_03704 PF05658 Head domain of trimeric autotransporter adhesin J156_03704 PF03895 YadA-like membrane anchor domain J156_03705 PF00082 Subtilase family J156_03705 PF04151 Bacterial pre-peptidase C-terminal domain J156_03706 PF03895 YadA-like membrane anchor domain J156_03706 PF05662 Coiled stalk of trimeric autotransporter adhesin J156_03706 PF05658 Head domain of trimeric autotransporter adhesin J156_03706 PF13018 Extended Signal Peptide of Type V secretion system J156_03707 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J156_03707 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J156_03707 PF02769 AIR synthase related protein, C-terminal domain J156_03708 PF10411 Disulfide bond isomerase protein N-terminus J156_03708 PF13098 Thioredoxin-like domain J156_03709 PF02899 Phage integrase, N-terminal SAM-like domain J156_03709 PF00589 Phage integrase family J156_03712 PF03739 Lipopolysaccharide export system permease LptF/LptG J156_03714 PF02789 Cytosol aminopeptidase family, N-terminal domain J156_03714 PF00883 Cytosol aminopeptidase family, catalytic domain J156_03717 PF10458 Valyl tRNA synthetase tRNA binding arm J156_03717 PF08264 Anticodon-binding domain of tRNA J156_03717 PF00133 tRNA synthetases class I (I, L, M and V) J156_03718 PF07715 TonB-dependent Receptor Plug Domain J156_03718 PF00593 TonB dependent receptor J156_03719 PF01464 Transglycosylase SLT domain J156_03719 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J156_03720 PF00544 Pectate lyase J156_03723 PF01066 CDP-alcohol phosphatidyltransferase J156_03725 PF04073 Aminoacyl-tRNA editing domain J156_03725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J156_03725 PF03129 Anticodon binding domain J156_03726 PF00816 H-NS histone family J156_03728 PF02405 Permease MlaE J156_03729 PF00005 ABC transporter J156_03730 PF02470 MlaD protein J156_03730 PF03886 ABC-type transport auxiliary lipoprotein component J156_03734 PF05045 Rhamnan synthesis protein F J156_03734 PF14307 Glycosyltransferase WbsX J156_03735 PF01144 Coenzyme A transferase J156_03736 PF01144 Coenzyme A transferase J156_03737 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J156_03737 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J156_03737 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J156_03737 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J156_03738 PF01050 Mannose-6-phosphate isomerase J156_03738 PF00483 Nucleotidyl transferase J156_03739 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J156_03739 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J156_03739 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J156_03740 PF04321 RmlD substrate binding domain J156_03741 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J156_03742 PF00483 Nucleotidyl transferase J156_03743 PF16363 GDP-mannose 4,6 dehydratase J156_03744 PF01012 Electron transfer flavoprotein domain J156_03745 PF01012 Electron transfer flavoprotein domain J156_03745 PF00766 Electron transfer flavoprotein FAD-binding domain J156_03747 PF01040 UbiA prenyltransferase family J156_03748 PF04030 D-arabinono-1,4-lactone oxidase J156_03748 PF01565 FAD binding domain J156_03749 PF00106 short chain dehydrogenase J156_03751 PF01370 NAD dependent epimerase/dehydratase family J156_03752 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_03752 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J156_03757 PF00535 Glycosyl transferase family 2 J156_03759 PF00005 ABC transporter J156_03759 PF14524 Wzt C-terminal domain J156_03761 PF01053 Cys/Met metabolism PLP-dependent enzyme J156_03762 PF00571 CBS domain J156_03762 PF00291 Pyridoxal-phosphate dependent enzyme J156_03766 PF00437 Type II/IV secretion system protein J156_03767 PF14497 Glutathione S-transferase, C-terminal domain J156_03767 PF02798 Glutathione S-transferase, N-terminal domain J156_03769 PF00271 Helicase conserved C-terminal domain J156_03769 PF00270 DEAD/DEAH box helicase J156_03772 PF00593 TonB dependent receptor J156_03772 PF07715 TonB-dependent Receptor Plug Domain J156_03773 PF01242 6-pyruvoyl tetrahydropterin synthase J156_03776 PF13185 GAF domain J156_03778 PF00756 Putative esterase J156_03779 PF07715 TonB-dependent Receptor Plug Domain J156_03779 PF00593 TonB dependent receptor J156_03780 PF13419 Haloacid dehalogenase-like hydrolase J156_03781 PF00817 impB/mucB/samB family J156_03781 PF11799 impB/mucB/samB family C-terminal domain J156_03782 PF07977 FabA-like domain J156_03783 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_03783 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_03785 PF01432 Peptidase family M3 J156_03788 PF00394 Multicopper oxidase J156_03788 PF07731 Multicopper oxidase J156_03788 PF07732 Multicopper oxidase J156_03789 PF05275 Copper resistance protein B precursor (CopB) J156_03790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J156_03796 PF01380 SIS domain J156_03797 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_03798 PF00005 ABC transporter J156_03798 PF12704 MacB-like periplasmic core domain J156_03798 PF02687 FtsX-like permease family J156_03799 PF02687 FtsX-like permease family J156_03799 PF00005 ABC transporter J156_03799 PF12704 MacB-like periplasmic core domain J156_03800 PF02687 FtsX-like permease family J156_03800 PF12704 MacB-like periplasmic core domain J156_03802 PF00158 Sigma-54 interaction domain J156_03802 PF00072 Response regulator receiver domain J156_03803 PF14602 Hexapeptide repeat of succinyl-transferase J156_03803 PF12804 MobA-like NTP transferase domain J156_03803 PF00132 Bacterial transferase hexapeptide (six repeats) J156_03806 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J156_03806 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J156_03807 PF02874 ATP synthase alpha/beta family, beta-barrel domain J156_03807 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J156_03808 PF00231 ATP synthase J156_03809 PF02874 ATP synthase alpha/beta family, beta-barrel domain J156_03809 PF00306 ATP synthase alpha/beta chain, C terminal domain J156_03809 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J156_03810 PF00213 ATP synthase delta (OSCP) subunit J156_03811 PF00430 ATP synthase B/B' CF(0) J156_03812 PF00137 ATP synthase subunit C J156_03813 PF00119 ATP synthase A chain J156_03817 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J156_03817 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_03819 PF02817 e3 binding domain J156_03819 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J156_03819 PF00364 Biotin-requiring enzyme J156_03825 PF03180 NLPA lipoprotein J156_03826 PF00528 Binding-protein-dependent transport system inner membrane component J156_03827 PF09383 NIL domain J156_03827 PF00005 ABC transporter J156_03828 PF00892 EamA-like transporter family J156_03829 PF04461 Protein of unknown function (DUF520) J156_03831 PF00072 Response regulator receiver domain J156_03831 PF01627 Hpt domain J156_03831 PF18415 Histidine kinase receptor ArcB trans-membrane domain J156_03831 PF00989 PAS fold J156_03831 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03831 PF00512 His Kinase A (phospho-acceptor) domain J156_03835 PF13419 Haloacid dehalogenase-like hydrolase J156_03836 PF01479 S4 domain J156_03836 PF00849 RNA pseudouridylate synthase J156_03837 PF05175 Methyltransferase small domain J156_03837 PF08468 Methyltransferase small domain N-terminal J156_03839 PF07995 Glucose / Sorbosone dehydrogenase J156_03841 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03841 PF00512 His Kinase A (phospho-acceptor) domain J156_03841 PF00989 PAS fold J156_03845 PF01168 Alanine racemase, N-terminal domain J156_03845 PF00842 Alanine racemase, C-terminal domain J156_03846 PF01266 FAD dependent oxidoreductase J156_03847 PF01037 Lrp/AsnC ligand binding domain J156_03849 PF01641 SelR domain J156_03851 PF01618 MotA/TolQ/ExbB proton channel family J156_03852 PF13677 Membrane MotB of proton-channel complex MotA/MotB J156_03852 PF00691 OmpA family J156_03857 PF01061 ABC-2 type transporter J156_03858 PF00005 ABC transporter J156_03859 PF00999 Sodium/hydrogen exchanger family J156_03860 PF02469 Fasciclin domain J156_03861 PF03167 Uracil DNA glycosylase superfamily J156_03863 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J156_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03865 PF03466 LysR substrate binding domain J156_03866 PF03358 NADPH-dependent FMN reductase J156_03867 PF00248 Aldo/keto reductase family J156_03869 PF01431 Peptidase family M13 J156_03869 PF05649 Peptidase family M13 J156_03873 PF13520 Amino acid permease J156_03875 PF00072 Response regulator receiver domain J156_03875 PF04397 LytTr DNA-binding domain J156_03876 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_03876 PF00672 HAMP domain J156_03876 PF02743 Cache domain J156_03876 PF06580 Histidine kinase J156_03879 PF05974 Domain of unknown function (DUF892) J156_03880 PF05067 Manganese containing catalase J156_03883 PF01339 CheB methylesterase J156_03883 PF03705 CheR methyltransferase, all-alpha domain J156_03883 PF08448 PAS fold J156_03883 PF01739 CheR methyltransferase, SAM binding domain J156_03886 PF02954 Bacterial regulatory protein, Fis family J156_03886 PF00072 Response regulator receiver domain J156_03886 PF00158 Sigma-54 interaction domain J156_03888 PF01654 Cytochrome bd terminal oxidase subunit I J156_03889 PF02322 Cytochrome bd terminal oxidase subunit II J156_03893 PF16363 GDP-mannose 4,6 dehydratase J156_03895 PF03275 UDP-galactopyranose mutase J156_03897 PF00005 ABC transporter J156_03897 PF00664 ABC transporter transmembrane region J156_03900 PF00107 Zinc-binding dehydrogenase J156_03900 PF13823 Alcohol dehydrogenase GroES-associated J156_03900 PF08240 Alcohol dehydrogenase GroES-like domain J156_03909 PF00593 TonB dependent receptor J156_03909 PF07715 TonB-dependent Receptor Plug Domain J156_03912 PF00005 ABC transporter J156_03914 PF03466 LysR substrate binding domain J156_03914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03915 PF01042 Endoribonuclease L-PSP J156_03917 PF01527 Transposase J156_03921 PF02203 Tar ligand binding domain homologue J156_03921 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J156_03921 PF00672 HAMP domain J156_03924 PF03466 LysR substrate binding domain J156_03924 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03925 PF02525 Flavodoxin-like fold J156_03934 PF00557 Metallopeptidase family M24 J156_03939 PF04545 Sigma-70, region 4 J156_03939 PF04542 Sigma-70 region 2 J156_03939 PF04546 Sigma-70, non-essential region J156_03939 PF03979 Sigma-70 factor, region 1.1 J156_03939 PF04539 Sigma-70 region 3 J156_03939 PF00140 Sigma-70 factor, region 1.2 J156_03940 PF02580 D-Tyr-tRNA(Tyr) deacylase J156_03941 PF03279 Bacterial lipid A biosynthesis acyltransferase J156_03943 PF00925 GTP cyclohydrolase II J156_03947 PF00535 Glycosyl transferase family 2 J156_03950 PF01189 16S rRNA methyltransferase RsmB/F J156_03950 PF01029 NusB family J156_03951 PF00551 Formyl transferase J156_03951 PF02911 Formyl transferase, C-terminal domain J156_03952 PF01327 Polypeptide deformylase J156_03953 PF01476 LysM domain J156_03954 PF17782 DprA winged helix domain J156_03954 PF02481 DNA recombination-mediator protein A J156_03955 PF04361 Protein of unknown function (DUF494) J156_03956 PF00114 Pilin (bacterial filament) J156_03956 PF07963 Prokaryotic N-terminal methylation motif J156_03958 PF01751 Toprim domain J156_03958 PF01131 DNA topoisomerase J156_03958 PF13368 Topoisomerase C-terminal repeat J156_03959 PF01300 Telomere recombination J156_03964 PF01343 Peptidase family S49 J156_03965 PF01554 MatE J156_03970 PF17764 3′ DNA-binding domain (3′BD) J156_03970 PF00270 DEAD/DEAH box helicase J156_03970 PF00271 Helicase conserved C-terminal domain J156_03970 PF18074 Primosomal protein N C-terminal domain J156_03970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J156_03971 PF13417 Glutathione S-transferase, N-terminal domain J156_03971 PF00043 Glutathione S-transferase, C-terminal domain J156_03974 PF07992 Pyridine nucleotide-disulphide oxidoreductase J156_03975 PF03458 UPF0126 domain J156_03976 PF04545 Sigma-70, region 4 J156_03976 PF04542 Sigma-70 region 2 J156_03977 PF03167 Uracil DNA glycosylase superfamily J156_03978 PF01339 CheB methylesterase J156_03978 PF00072 Response regulator receiver domain J156_03979 PF18075 FtsX extracellular domain J156_03980 PF00005 ABC transporter J156_03981 PF00270 DEAD/DEAH box helicase J156_03981 PF00271 Helicase conserved C-terminal domain J156_03981 PF12300 ATP-dependent RNA helicase RhlB J156_03982 PF00085 Thioredoxin J156_03983 PF07498 Rho termination factor, N-terminal domain J156_03983 PF07497 Rho termination factor, RNA-binding domain J156_03983 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J156_03984 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J156_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_03985 PF03466 LysR substrate binding domain J156_03987 PF03971 Monomeric isocitrate dehydrogenase J156_03990 PF09704 CRISPR-associated protein (Cas_Cas5) J156_03995 PF01867 CRISPR associated protein Cas1 J156_03996 PF09827 CRISPR associated protein Cas2 J156_03998 PF01476 LysM domain J156_03998 PF04972 BON domain J156_03999 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J156_03999 PF14489 QueF-like protein J156_04000 PF01546 Peptidase family M20/M25/M40 J156_04000 PF07687 Peptidase dimerisation domain J156_04001 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_04002 PF00873 AcrB/AcrD/AcrF family J156_04003 PF00873 AcrB/AcrD/AcrF family J156_04004 PF07063 Domain of unknown function (DUF1338) J156_04012 PF01427 D-ala-D-ala dipeptidase J156_04013 PF01510 N-acetylmuramoyl-L-alanine amidase J156_04015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J156_04015 PF13378 Enolase C-terminal domain-like J156_04017 PF13520 Amino acid permease J156_04020 PF05360 yiaA/B two helix domain J156_04021 PF07995 Glucose / Sorbosone dehydrogenase J156_04022 PF01915 Glycosyl hydrolase family 3 C-terminal domain J156_04022 PF14310 Fibronectin type III-like domain J156_04022 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_04023 PF02152 Dihydroneopterin aldolase J156_04024 PF00814 Glycoprotease family J156_04025 PF01165 Ribosomal protein S21 J156_04026 PF09424 Yqey-like protein J156_04027 PF03631 Virulence factor BrkB J156_04028 PF10410 DnaB-helicase binding domain of primase J156_04028 PF08278 DNA primase DnaG DnaB-binding J156_04028 PF08275 DNA primase catalytic core, N-terminal domain J156_04028 PF01807 CHC2 zinc finger J156_04029 PF13593 SBF-like CPA transporter family (DUF4137) J156_04031 PF01040 UbiA prenyltransferase family J156_04036 PF00510 Cytochrome c oxidase subunit III J156_04037 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J156_04039 PF00115 Cytochrome C and Quinol oxidase polypeptide I J156_04040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J156_04040 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J156_04042 PF14850 DNA-binding domain of Proline dehydrogenase J156_04042 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J156_04042 PF00171 Aldehyde dehydrogenase family J156_04042 PF01619 Proline dehydrogenase J156_04050 PF00579 tRNA synthetases class I (W and Y) J156_04051 PF04225 Opacity-associated protein A LysM-like domain J156_04051 PF01551 Peptidase family M23 J156_04052 PF03702 Anhydro-N-acetylmuramic acid kinase J156_04054 PF07690 Major Facilitator Superfamily J156_04055 PF03372 Endonuclease/Exonuclease/phosphatase family J156_04056 PF00156 Phosphoribosyl transferase domain J156_04058 PF13614 AAA domain J156_04059 PF17762 HTH domain found in ParB protein J156_04059 PF02195 ParB-like nuclease domain J156_04061 PF01370 NAD dependent epimerase/dehydratase family J156_04062 PF00535 Glycosyl transferase family 2 J156_04065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J156_04065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J156_04065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J156_04065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J156_04066 PF00692 dUTPase J156_04067 PF02441 Flavoprotein J156_04067 PF04127 DNA / pantothenate metabolism flavoprotein J156_04068 PF04002 RadC-like JAB domain J156_04069 PF00750 tRNA synthetases class I (R) J156_04069 PF05746 DALR anticodon binding domain J156_04069 PF03485 Arginyl tRNA synthetase N terminal domain J156_04072 PF00106 short chain dehydrogenase J156_04073 PF01757 Acyltransferase family J156_04074 PF03033 Glycosyltransferase family 28 N-terminal domain J156_04075 PF00975 Thioesterase domain J156_04075 PF00668 Condensation domain J156_04075 PF00550 Phosphopantetheine attachment site J156_04075 PF00501 AMP-binding enzyme J156_04075 PF13193 AMP-binding enzyme C-terminal domain J156_04076 PF17810 Arginine decarboxylase helical bundle domain J156_04076 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J156_04076 PF17944 Arginine decarboxylase C-terminal helical extension J156_04077 PF17284 Spermidine synthase tetramerisation domain J156_04082 PF00543 Nitrogen regulatory protein P-II J156_04083 PF04380 Membrane fusogenic activity J156_04084 PF01078 Magnesium chelatase, subunit ChlI J156_04084 PF13335 Magnesium chelatase, subunit ChlI C-terminal J156_04087 PF00563 EAL domain J156_04087 PF12792 CSS motif domain associated with EAL J156_04088 PF00487 Fatty acid desaturase J156_04089 PF00111 2Fe-2S iron-sulfur cluster binding domain J156_04089 PF00970 Oxidoreductase FAD-binding domain J156_04089 PF00175 Oxidoreductase NAD-binding domain J156_04090 PF00440 Bacterial regulatory proteins, tetR family J156_04096 PF01139 tRNA-splicing ligase RtcB J156_04104 PF08338 Domain of unknown function (DUF1731) J156_04104 PF01370 NAD dependent epimerase/dehydratase family J156_04105 PF00486 Transcriptional regulatory protein, C terminal J156_04105 PF00072 Response regulator receiver domain J156_04106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_04106 PF00512 His Kinase A (phospho-acceptor) domain J156_04106 PF08521 Two-component sensor kinase N-terminal J156_04110 PF00595 PDZ domain J156_04114 PF01594 AI-2E family transporter J156_04115 PF13419 Haloacid dehalogenase-like hydrolase J156_04116 PF00883 Cytosol aminopeptidase family, catalytic domain J156_04116 PF02789 Cytosol aminopeptidase family, N-terminal domain J156_04118 PF08281 Sigma-70, region 4 J156_04118 PF04542 Sigma-70 region 2 J156_04119 PF00199 Catalase J156_04122 PF00072 Response regulator receiver domain J156_04122 PF00196 Bacterial regulatory proteins, luxR family J156_04123 PF07730 Histidine kinase J156_04124 PF13533 Biotin-lipoyl like J156_04125 PF00005 ABC transporter J156_04129 PF00892 EamA-like transporter family J156_04130 PF00892 EamA-like transporter family J156_04131 PF00892 EamA-like transporter family J156_04134 PF00753 Metallo-beta-lactamase superfamily J156_04135 PF00579 tRNA synthetases class I (W and Y) J156_04136 PF05532 CsbD-like J156_04139 PF00491 Arginase family J156_04144 PF02223 Thymidylate kinase J156_04147 PF03309 Type III pantothenate kinase J156_04148 PF02237 Biotin protein ligase C terminal domain J156_04148 PF03099 Biotin/lipoate A/B protein ligase family J156_04148 PF08279 HTH domain J156_04150 PF06167 Glucose-regulated metallo-peptidase M90 J156_04153 PF00672 HAMP domain J156_04153 PF00512 His Kinase A (phospho-acceptor) domain J156_04153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_04154 PF00072 Response regulator receiver domain J156_04154 PF00486 Transcriptional regulatory protein, C terminal J156_04156 PF01207 Dihydrouridine synthase (Dus) J156_04159 PF06628 Catalase-related immune-responsive J156_04159 PF00199 Catalase J156_04160 PF06733 DEAD_2 J156_04160 PF13307 Helicase C-terminal domain J156_04163 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J156_04163 PF01488 Shikimate / quinate 5-dehydrogenase J156_04163 PF08501 Shikimate dehydrogenase substrate binding domain J156_04165 PF00175 Oxidoreductase NAD-binding domain J156_04165 PF00667 FAD binding domain J156_04165 PF00258 Flavodoxin J156_04167 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_04167 PF03466 LysR substrate binding domain J156_04169 PF00490 Delta-aminolevulinic acid dehydratase J156_04173 PF00326 Prolyl oligopeptidase family J156_04173 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J156_04174 PF00043 Glutathione S-transferase, C-terminal domain J156_04174 PF02798 Glutathione S-transferase, N-terminal domain J156_04178 PF04820 Tryptophan halogenase J156_04181 PF00005 ABC transporter J156_04183 PF01381 Helix-turn-helix J156_04185 PF01229 Glycosyl hydrolases family 39 J156_04186 PF02583 Metal-sensitive transcriptional repressor J156_04187 PF01545 Cation efflux family J156_04187 PF16916 Dimerisation domain of Zinc Transporter J156_04189 PF00593 TonB dependent receptor J156_04189 PF07715 TonB-dependent Receptor Plug Domain J156_04191 PF01965 DJ-1/PfpI family J156_04191 PF12833 Helix-turn-helix domain J156_04192 PF00175 Oxidoreductase NAD-binding domain J156_04192 PF00111 2Fe-2S iron-sulfur cluster binding domain J156_04192 PF00970 Oxidoreductase FAD-binding domain J156_04193 PF00005 ABC transporter J156_04194 PF01061 ABC-2 type transporter J156_04197 PF02558 Ketopantoate reductase PanE/ApbA J156_04197 PF08546 Ketopantoate reductase PanE/ApbA C terminal J156_04203 PF00268 Ribonucleotide reductase, small chain J156_04204 PF00317 Ribonucleotide reductase, all-alpha domain J156_04204 PF03477 ATP cone domain J156_04204 PF02867 Ribonucleotide reductase, barrel domain J156_04206 PF13380 CoA binding domain J156_04206 PF13607 Succinyl-CoA ligase like flavodoxin domain J156_04206 PF00583 Acetyltransferase (GNAT) family J156_04207 PF01769 Divalent cation transporter J156_04207 PF03448 MgtE intracellular N domain J156_04207 PF00571 CBS domain J156_04208 PF00194 Eukaryotic-type carbonic anhydrase J156_04209 PF02254 TrkA-N domain J156_04209 PF00999 Sodium/hydrogen exchanger family J156_04210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J156_04210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J156_04211 PF00723 Glycosyl hydrolases family 15 J156_04214 PF05166 YcgL domain J156_04215 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_04215 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_04217 PF00535 Glycosyl transferase family 2 J156_04228 PF07977 FabA-like domain J156_04229 PF01553 Acyltransferase J156_04231 PF00550 Phosphopantetheine attachment site J156_04232 PF04820 Tryptophan halogenase J156_04236 PF00326 Prolyl oligopeptidase family J156_04236 PF07676 WD40-like Beta Propeller Repeat J156_04239 PF01218 Coproporphyrinogen III oxidase J156_04240 PF00476 DNA polymerase family A J156_04240 PF01612 3'-5' exonuclease J156_04240 PF01367 5'-3' exonuclease, C-terminal SAM fold J156_04240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J156_04246 PF00069 Protein kinase domain J156_04246 PF03793 PASTA domain J156_04254 PF04717 Type VI secretion system, phage-baseplate injector J156_04257 PF00069 Protein kinase domain J156_04257 PF03793 PASTA domain J156_04259 PF04542 Sigma-70 region 2 J156_04259 PF08281 Sigma-70, region 4 J156_04262 PF00328 Histidine phosphatase superfamily (branch 2) J156_04269 PF17871 AAA lid domain J156_04269 PF00004 ATPase family associated with various cellular activities (AAA) J156_04269 PF10431 C-terminal, D2-small domain, of ClpB protein J156_04269 PF07724 AAA domain (Cdc48 subfamily) J156_04274 PF05638 Type VI secretion system effector, Hcp J156_04279 PF14602 Hexapeptide repeat of succinyl-transferase J156_04279 PF12464 Maltose acetyltransferase J156_04280 PF13361 UvrD-like helicase C-terminal domain J156_04280 PF00580 UvrD/REP helicase N-terminal domain J156_04282 PF13091 PLD-like domain J156_04282 PF13396 Phospholipase_D-nuclease N-terminal J156_04283 PF03466 LysR substrate binding domain J156_04283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_04284 PF03737 Aldolase/RraA J156_04285 PF04303 PrpF protein J156_04286 PF04909 Amidohydrolase J156_04287 PF00471 Ribosomal protein L33 J156_04288 PF00830 Ribosomal L28 family J156_04289 PF00873 AcrB/AcrD/AcrF family J156_04290 PF13533 Biotin-lipoyl like J156_04294 PF02527 rRNA small subunit methyltransferase G J156_04295 PF16655 PhoD-like phosphatase, N-terminal domain J156_04295 PF09423 PhoD-like phosphatase J156_04297 PF09423 PhoD-like phosphatase J156_04297 PF16655 PhoD-like phosphatase, N-terminal domain J156_04298 PF01648 4'-phosphopantetheinyl transferase superfamily J156_04299 PF04226 Transglycosylase associated protein J156_04301 PF03372 Endonuclease/Exonuclease/phosphatase family J156_04303 PF00480 ROK family J156_04305 PF09312 SurA N-terminal domain J156_04307 PF00474 Sodium:solute symporter family J156_04308 PF04341 Protein of unknown function, DUF485 J156_04310 PF13193 AMP-binding enzyme C-terminal domain J156_04310 PF00501 AMP-binding enzyme J156_04310 PF16177 Acetyl-coenzyme A synthetase N-terminus J156_04311 PF00196 Bacterial regulatory proteins, luxR family J156_04311 PF00072 Response regulator receiver domain J156_04316 PF04616 Glycosyl hydrolases family 43 J156_04316 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J156_04317 PF00248 Aldo/keto reductase family J156_04320 PF01557 Fumarylacetoacetate (FAA) hydrolase family J156_04321 PF13378 Enolase C-terminal domain-like J156_04321 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J156_04323 PF05336 L-rhamnose mutarotase J156_04324 PF07690 Major Facilitator Superfamily J156_04325 PF09339 IclR helix-turn-helix domain J156_04325 PF01614 Bacterial transcriptional regulator J156_04326 PF02659 Putative manganese efflux pump J156_04327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_04327 PF00512 His Kinase A (phospho-acceptor) domain J156_04329 PF06165 Glycosyltransferase family 36 J156_04329 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J156_04332 PF13360 PQQ-like domain J156_04332 PF01011 PQQ enzyme repeat J156_04332 PF13570 PQQ-like domain J156_04336 PF04357 TamB, inner membrane protein subunit of TAM complex J156_04337 PF01103 Surface antigen J156_04337 PF17243 POTRA domain TamA domain 1 J156_04340 PF01527 Transposase J156_04341 PF13276 HTH-like domain J156_04341 PF00665 Integrase core domain J156_04341 PF13333 Integrase core domain J156_04342 PF00005 ABC transporter J156_04342 PF03412 Peptidase C39 family J156_04342 PF00664 ABC transporter transmembrane region J156_04344 PF02092 Glycyl-tRNA synthetase beta subunit J156_04344 PF05746 DALR anticodon binding domain J156_04345 PF02091 Glycyl-tRNA synthetase alpha subunit J156_04346 PF00437 Type II/IV secretion system protein J156_04346 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J156_04348 PF00958 GMP synthase C terminal domain J156_04348 PF00117 Glutamine amidotransferase class-I J156_04350 PF00902 Sec-independent protein translocase protein (TatC) J156_04351 PF02416 mttA/Hcf106 family J156_04352 PF02416 mttA/Hcf106 family J156_04354 PF00762 Ferrochelatase J156_04355 PF12697 Alpha/beta hydrolase family J156_04357 PF04381 Putative exonuclease, RdgC J156_04358 PF01171 PP-loop family J156_04360 PF00356 Bacterial regulatory proteins, lacI family J156_04361 PF03648 Glycosyl hydrolase family 67 N-terminus J156_04361 PF07477 Glycosyl hydrolase family 67 C-terminus J156_04361 PF07488 Glycosyl hydrolase family 67 middle domain J156_04363 PF13378 Enolase C-terminal domain-like J156_04363 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J156_04364 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J156_04364 PF04616 Glycosyl hydrolases family 43 J156_04365 PF00933 Glycosyl hydrolase family 3 N terminal domain J156_04365 PF01915 Glycosyl hydrolase family 3 C-terminal domain J156_04365 PF07691 PA14 domain J156_04365 PF14310 Fibronectin type III-like domain J156_04366 PF08125 Mannitol dehydrogenase C-terminal domain J156_04366 PF01232 Mannitol dehydrogenase Rossmann domain J156_04371 PF00171 Aldehyde dehydrogenase family J156_04374 PF00202 Aminotransferase class-III J156_04375 PF00202 Aminotransferase class-III J156_04377 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J156_04377 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J156_04380 PF08450 SMP-30/Gluconolactonase/LRE-like region J156_04381 PF00331 Glycosyl hydrolase family 10 J156_04382 PF16355 Domain of unknown function (DUF4982) J156_04382 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J156_04382 PF02837 Glycosyl hydrolases family 2, sugar binding domain J156_04382 PF00703 Glycosyl hydrolases family 2 J156_04382 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J156_04383 PF02614 Glucuronate isomerase J156_04384 PF00331 Glycosyl hydrolase family 10 J156_04384 PF03422 Carbohydrate binding module (family 6) J156_04384 PF00553 Cellulose binding domain J156_04386 PF00553 Cellulose binding domain J156_04386 PF03422 Carbohydrate binding module (family 6) J156_04386 PF00331 Glycosyl hydrolase family 10 J156_04390 PF04616 Glycosyl hydrolases family 43 J156_04400 PF00107 Zinc-binding dehydrogenase J156_04400 PF16197 Ketoacyl-synthetase C-terminal extension J156_04400 PF00109 Beta-ketoacyl synthase, N-terminal domain J156_04400 PF02801 Beta-ketoacyl synthase, C-terminal domain J156_04400 PF08659 KR domain J156_04400 PF00550 Phosphopantetheine attachment site J156_04400 PF14765 Polyketide synthase dehydratase J156_04400 PF00698 Acyl transferase domain J156_04400 PF08240 Alcohol dehydrogenase GroES-like domain J156_04401 PF01553 Acyltransferase J156_04403 PF00356 Bacterial regulatory proteins, lacI family J156_04406 PF04820 Tryptophan halogenase J156_04407 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J156_04408 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J156_04410 PF04337 Protein of unknown function, DUF480 J156_04413 PF13361 UvrD-like helicase C-terminal domain J156_04413 PF00580 UvrD/REP helicase N-terminal domain J156_04414 PF00265 Thymidine kinase J156_04415 PF08446 PAS fold J156_04415 PF00512 His Kinase A (phospho-acceptor) domain J156_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J156_04415 PF01590 GAF domain J156_04415 PF00360 Phytochrome region J156_04416 PF04349 Periplasmic glucan biosynthesis protein, MdoG J156_04418 PF06827 Zinc finger found in FPG and IleRS J156_04418 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J156_04418 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J156_04425 PF03594 Benzoate membrane transport protein J156_04426 PF13426 PAS domain J156_04426 PF08446 PAS fold J156_04426 PF01590 GAF domain J156_04426 PF00360 Phytochrome region J156_04427 PF01126 Heme oxygenase J156_04428 PF07690 Major Facilitator Superfamily J156_04429 PF01263 Aldose 1-epimerase J156_04431 PF02810 SEC-C motif J156_04432 PF01925 Sulfite exporter TauE/SafE J156_04436 PF01227 GTP cyclohydrolase I J156_04438 PF07869 Protein of unknown function (DUF1656) J156_04439 PF00529 HlyD membrane-fusion protein of T1SS J156_04439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J156_04440 PF02321 Outer membrane efflux protein J156_04441 PF04632 Fusaric acid resistance protein family J156_04442 PF00083 Sugar (and other) transporter J156_04443 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J156_04444 PF13091 PLD-like domain J156_04444 PF13396 Phospholipase_D-nuclease N-terminal J156_04449 PF01850 PIN domain J156_04454 PF00849 RNA pseudouridylate synthase J156_04456 PF01527 Transposase J156_04457 PF13276 HTH-like domain J156_04457 PF00665 Integrase core domain J156_04457 PF13333 Integrase core domain J156_04460 PF02785 Biotin carboxylase C-terminal domain J156_04460 PF00289 Biotin carboxylase, N-terminal domain J156_04460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J156_04461 PF01425 Amidase J156_04468 PF13538 UvrD-like helicase C-terminal domain J156_04471 PF00580 UvrD/REP helicase N-terminal domain J156_04471 PF12705 PD-(D/E)XK nuclease superfamily J156_04471 PF13361 UvrD-like helicase C-terminal domain J156_04472 PF17946 RecC C-terminal domain J156_04474 PF00005 ABC transporter J156_04475 PF02405 Permease MlaE J156_04476 PF02470 MlaD protein J156_04477 PF05494 MlaC protein J156_04479 PF04333 MlaA lipoprotein J156_04481 PF00255 Glutathione peroxidase J156_04483 PF02646 RmuC family J156_04484 PF00107 Zinc-binding dehydrogenase J156_04484 PF08240 Alcohol dehydrogenase GroES-like domain J156_04485 PF03466 LysR substrate binding domain J156_04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J156_04487 PF13417 Glutathione S-transferase, N-terminal domain J156_04487 PF00043 Glutathione S-transferase, C-terminal domain J156_04489 PF13520 Amino acid permease J156_04490 PF07971 Glycosyl hydrolase family 92 J156_04490 PF17678 Glycosyl hydrolase family 92 N-terminal domain J156_04491 PF10947 Protein of unknown function (DUF2628) J156_04492 PF00990 Diguanylate cyclase, GGDEF domain J156_04493 PF17853 GGDEF-like domain J156_04493 PF05651 Putative sugar diacid recognition J156_04493 PF13556 PucR C-terminal helix-turn-helix domain J156_04494 PF02595 Glycerate kinase family J156_04495 PF07690 Major Facilitator Superfamily J156_04498 PF17785 PUA-like domain J156_04498 PF10672 S-adenosylmethionine-dependent methyltransferase J156_04500 PF03741 Integral membrane protein TerC family J156_04501 PF01694 Rhomboid family J156_04502 PF03009 Glycerophosphoryl diester phosphodiesterase family J156_04504 PF01569 PAP2 superfamily J156_04505 PF10396 GTP-binding protein TrmE N-terminus J156_04505 PF12631 MnmE helical domain J156_04505 PF01926 50S ribosome-binding GTPase J156_04506 PF01522 Polysaccharide deacetylase J156_04507 PF14849 YidC periplasmic domain J156_04507 PF02096 60Kd inner membrane protein J156_04508 PF00825 Ribonuclease P J156_04509 PF00468 Ribosomal protein L34