locus-tag class description J157_00004 PF01527 Transposase J157_00006 PF00239 Resolvase, N terminal domain J157_00006 PF02796 Helix-turn-helix domain of resolvase J157_00019 PF07015 VirC1 protein J157_00023 PF03377 TAL effector repeat J157_00027 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J157_00029 PF02796 Helix-turn-helix domain of resolvase J157_00029 PF00239 Resolvase, N terminal domain J157_00034 PF01526 Tn3 transposase DDE domain J157_00034 PF13700 Domain of unknown function (DUF4158) J157_00037 PF00239 Resolvase, N terminal domain J157_00037 PF02796 Helix-turn-helix domain of resolvase J157_00038 PF03377 TAL effector repeat J157_00042 PF13614 AAA domain J157_00050 PF13406 Transglycosylase SLT domain J157_00051 PF01526 Tn3 transposase DDE domain J157_00051 PF13700 Domain of unknown function (DUF4158) J157_00056 PF01527 Transposase J157_00057 PF03377 TAL effector repeat J157_00061 PF07015 VirC1 protein J157_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J157_00074 PF08751 TrwC relaxase J157_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J157_00074 PF07057 DNA helicase TraI J157_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J157_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J157_00074 PF07057 DNA helicase TraI J157_00074 PF08751 TrwC relaxase J157_00079 PF01464 Transglycosylase SLT domain J157_00080 PF00437 Type II/IV secretion system protein J157_00081 PF03743 Bacterial conjugation TrbI-like protein J157_00082 PF03524 Conjugal transfer protein J157_00094 PF01527 Transposase J157_00097 PF02195 ParB-like nuclease domain J157_00097 PF08535 KorB domain J157_00097 PF06613 KorB C-terminal beta-barrel domain J157_00098 PF13614 AAA domain J157_00103 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J157_00104 PF02796 Helix-turn-helix domain of resolvase J157_00104 PF00239 Resolvase, N terminal domain J157_00105 PF13333 Integrase core domain J157_00105 PF00665 Integrase core domain J157_00105 PF13276 HTH-like domain J157_00106 PF13276 HTH-like domain J157_00106 PF13333 Integrase core domain J157_00106 PF00665 Integrase core domain J157_00107 PF03377 TAL effector repeat J157_00108 PF01526 Tn3 transposase DDE domain J157_00108 PF13700 Domain of unknown function (DUF4158) J157_00111 PF00239 Resolvase, N terminal domain J157_00111 PF02796 Helix-turn-helix domain of resolvase J157_00112 PF00308 Bacterial dnaA protein J157_00112 PF08299 Bacterial dnaA protein helix-turn-helix J157_00112 PF11638 DnaA N-terminal domain J157_00113 PF00712 DNA polymerase III beta subunit, N-terminal domain J157_00113 PF02767 DNA polymerase III beta subunit, central domain J157_00113 PF02768 DNA polymerase III beta subunit, C-terminal domain J157_00114 PF02463 RecF/RecN/SMC N terminal domain J157_00116 PF01751 Toprim domain J157_00116 PF00986 DNA gyrase B subunit, carboxyl terminus J157_00116 PF18053 DNA gyrase B subunit insert domain J157_00116 PF00204 DNA gyrase B J157_00116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00118 PF01435 Peptidase family M48 J157_00120 PF03544 Gram-negative bacterial TonB protein C-terminal J157_00121 PF01618 MotA/TolQ/ExbB proton channel family J157_00122 PF02472 Biopolymer transport protein ExbD/TolR J157_00123 PF02472 Biopolymer transport protein ExbD/TolR J157_00124 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J157_00126 PF13091 PLD-like domain J157_00126 PF13396 Phospholipase_D-nuclease N-terminal J157_00129 PF04055 Radical SAM superfamily J157_00131 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J157_00134 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J157_00134 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J157_00135 PF03572 Peptidase family S41 J157_00135 PF13180 PDZ domain J157_00136 PF01551 Peptidase family M23 J157_00138 PF04389 Peptidase family M28 J157_00140 PF00150 Cellulase (glycosyl hydrolase family 5) J157_00141 PF00150 Cellulase (glycosyl hydrolase family 5) J157_00142 PF00150 Cellulase (glycosyl hydrolase family 5) J157_00143 PF08240 Alcohol dehydrogenase GroES-like domain J157_00143 PF00107 Zinc-binding dehydrogenase J157_00144 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_00144 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J157_00145 PF00310 Glutamine amidotransferases class-II J157_00145 PF04898 Glutamate synthase central domain J157_00145 PF01645 Conserved region in glutamate synthase J157_00145 PF01493 GXGXG motif J157_00149 PF01804 Penicillin amidase J157_00151 PF03466 LysR substrate binding domain J157_00151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00154 PF02397 Bacterial sugar transferase J157_00155 PF02350 UDP-N-acetylglucosamine 2-epimerase J157_00157 PF03808 Glycosyl transferase WecB/TagA/CpsF family J157_00158 PF13439 Glycosyltransferase Family 4 J157_00158 PF00534 Glycosyl transferases group 1 J157_00162 PF13537 Glutamine amidotransferase domain J157_00162 PF00733 Asparagine synthase J157_00165 PF16363 GDP-mannose 4,6 dehydratase J157_00168 PF00664 ABC transporter transmembrane region J157_00168 PF00005 ABC transporter J157_00170 PF13537 Glutamine amidotransferase domain J157_00170 PF00733 Asparagine synthase J157_00175 PF00685 Sulfotransferase domain J157_00192 PF00270 DEAD/DEAH box helicase J157_00192 PF00271 Helicase conserved C-terminal domain J157_00192 PF09369 Domain of unknown function (DUF1998) J157_00193 PF03006 Haemolysin-III related J157_00196 PF00106 short chain dehydrogenase J157_00198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00198 PF03466 LysR substrate binding domain J157_00202 PF02525 Flavodoxin-like fold J157_00204 PF01527 Transposase J157_00205 PF13276 HTH-like domain J157_00205 PF00665 Integrase core domain J157_00205 PF13333 Integrase core domain J157_00213 PF05532 CsbD-like J157_00217 PF01447 Thermolysin metallopeptidase, catalytic domain J157_00217 PF02868 Thermolysin metallopeptidase, alpha-helical domain J157_00217 PF16485 Protealysin propeptide J157_00219 PF13344 Haloacid dehalogenase-like hydrolase J157_00219 PF00293 NUDIX domain J157_00222 PF00085 Thioredoxin J157_00223 PF08946 Osmosensory transporter coiled coil J157_00223 PF00083 Sugar (and other) transporter J157_00231 PF17863 AAA lid domain J157_00231 PF07726 ATPase family associated with various cellular activities (AAA) J157_00237 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J157_00238 PF00155 Aminotransferase class I and II J157_00239 PF00593 TonB dependent receptor J157_00239 PF07715 TonB-dependent Receptor Plug Domain J157_00241 PF07883 Cupin domain J157_00242 PF00171 Aldehyde dehydrogenase family J157_00246 PF02735 Ku70/Ku80 beta-barrel domain J157_00247 PF01070 FMN-dependent dehydrogenase J157_00248 PF00144 Beta-lactamase J157_00249 PF07730 Histidine kinase J157_00250 PF00196 Bacterial regulatory proteins, luxR family J157_00250 PF00072 Response regulator receiver domain J157_00254 PF00486 Transcriptional regulatory protein, C terminal J157_00254 PF18500 CadC C-terminal domain 1 J157_00255 PF07055 Enoyl reductase FAD binding domain J157_00255 PF12241 Trans-2-enoyl-CoA reductase catalytic region J157_00255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J157_00257 PF00294 pfkB family carbohydrate kinase J157_00268 PF01527 Transposase J157_00269 PF13333 Integrase core domain J157_00269 PF00665 Integrase core domain J157_00269 PF13276 HTH-like domain J157_00270 PF11896 Domain of unknown function (DUF3416) J157_00270 PF00128 Alpha amylase, catalytic domain J157_00271 PF00128 Alpha amylase, catalytic domain J157_00271 PF16657 Maltogenic Amylase, C-terminal domain J157_00272 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J157_00272 PF02806 Alpha amylase, C-terminal all-beta domain J157_00272 PF00128 Alpha amylase, catalytic domain J157_00274 PF00248 Aldo/keto reductase family J157_00275 PF00135 Carboxylesterase family J157_00276 PF13472 GDSL-like Lipase/Acylhydrolase family J157_00276 PF07859 alpha/beta hydrolase fold J157_00278 PF03480 Bacterial extracellular solute-binding protein, family 7 J157_00280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J157_00281 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J157_00281 PF04616 Glycosyl hydrolases family 43 J157_00282 PF00356 Bacterial regulatory proteins, lacI family J157_00283 PF04962 KduI/IolB family J157_00286 PF00657 GDSL-like Lipase/Acylhydrolase J157_00289 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J157_00290 PF01037 Lrp/AsnC ligand binding domain J157_00291 PF07715 TonB-dependent Receptor Plug Domain J157_00291 PF07660 Secretin and TonB N terminus short domain J157_00291 PF00593 TonB dependent receptor J157_00292 PF01734 Patatin-like phospholipase J157_00294 PF00005 ABC transporter J157_00297 PF00005 ABC transporter J157_00298 PF00528 Binding-protein-dependent transport system inner membrane component J157_00300 PF03781 Sulfatase-modifying factor enzyme 1 J157_00300 PF12867 DinB superfamily J157_00303 PF01381 Helix-turn-helix J157_00307 PF10609 NUBPL iron-transfer P-loop NTPase J157_00307 PF01883 Iron-sulfur cluster assembly protein J157_00310 PF13091 PLD-like domain J157_00311 PF03061 Thioesterase superfamily J157_00317 PF00107 Zinc-binding dehydrogenase J157_00317 PF08240 Alcohol dehydrogenase GroES-like domain J157_00319 PF02673 Bacitracin resistance protein BacA J157_00320 PF03951 Glutamine synthetase, beta-Grasp domain J157_00320 PF00120 Glutamine synthetase, catalytic domain J157_00321 PF00543 Nitrogen regulatory protein P-II J157_00322 PF00909 Ammonium Transporter Family J157_00323 PF00512 His Kinase A (phospho-acceptor) domain J157_00323 PF00989 PAS fold J157_00323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00324 PF02954 Bacterial regulatory protein, Fis family J157_00324 PF00072 Response regulator receiver domain J157_00324 PF00158 Sigma-54 interaction domain J157_00325 PF00080 Copper/zinc superoxide dismutase (SODC) J157_00326 PF00080 Copper/zinc superoxide dismutase (SODC) J157_00327 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J157_00329 PF02803 Thiolase, C-terminal domain J157_00329 PF00108 Thiolase, N-terminal domain J157_00336 PF00581 Rhodanese-like domain J157_00337 PF02556 Preprotein translocase subunit SecB J157_00338 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J157_00338 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J157_00340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J157_00340 PF00205 Thiamine pyrophosphate enzyme, central domain J157_00340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J157_00341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00342 PF02954 Bacterial regulatory protein, Fis family J157_00342 PF00072 Response regulator receiver domain J157_00342 PF00158 Sigma-54 interaction domain J157_00345 PF07690 Major Facilitator Superfamily J157_00346 PF00588 SpoU rRNA Methylase family J157_00349 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J157_00349 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J157_00350 PF02661 Fic/DOC family J157_00350 PF13784 Fic/DOC family N-terminal J157_00351 PF00561 alpha/beta hydrolase fold J157_00352 PF03692 Putative zinc- or iron-chelating domain J157_00353 PF00501 AMP-binding enzyme J157_00355 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J157_00357 PF07478 D-ala D-ala ligase C-terminus J157_00357 PF01820 D-ala D-ala ligase N-terminus J157_00359 PF03109 ABC1 family J157_00361 PF00849 RNA pseudouridylate synthase J157_00363 PF00472 RF-1 domain J157_00365 PF01112 Asparaginase J157_00366 PF01432 Peptidase family M3 J157_00367 PF12706 Beta-lactamase superfamily domain J157_00370 PF12833 Helix-turn-helix domain J157_00371 PF00999 Sodium/hydrogen exchanger family J157_00372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00372 PF03466 LysR substrate binding domain J157_00373 PF01274 Malate synthase J157_00374 PF00463 Isocitrate lyase family J157_00375 PF00990 Diguanylate cyclase, GGDEF domain J157_00379 PF00326 Prolyl oligopeptidase family J157_00380 PF02785 Biotin carboxylase C-terminal domain J157_00380 PF00289 Biotin carboxylase, N-terminal domain J157_00380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J157_00380 PF00364 Biotin-requiring enzyme J157_00381 PF01039 Carboxyl transferase domain J157_00382 PF02770 Acyl-CoA dehydrogenase, middle domain J157_00382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_00382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_00393 PF07683 Cobalamin synthesis protein cobW C-terminal domain J157_00393 PF02492 CobW/HypB/UreG, nucleotide-binding domain J157_00397 PF03969 AFG1-like ATPase J157_00398 PF01047 MarR family J157_00399 PF02566 OsmC-like protein J157_00404 PF16884 N-terminal domain of oxidoreductase J157_00404 PF00107 Zinc-binding dehydrogenase J157_00407 PF00849 RNA pseudouridylate synthase J157_00408 PF00593 TonB dependent receptor J157_00410 PF00271 Helicase conserved C-terminal domain J157_00410 PF08482 ATP-dependent helicase C-terminal J157_00410 PF00270 DEAD/DEAH box helicase J157_00410 PF04408 Helicase associated domain (HA2) J157_00411 PF07308 Protein of unknown function (DUF1456) J157_00412 PF00576 HIUase/Transthyretin family J157_00413 PF13454 FAD-NAD(P)-binding J157_00414 PF09349 OHCU decarboxylase J157_00414 PF01014 Uricase J157_00417 PF00266 Aminotransferase class-V J157_00418 PF07687 Peptidase dimerisation domain J157_00418 PF01546 Peptidase family M20/M25/M40 J157_00419 PF03466 LysR substrate binding domain J157_00419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00420 PF07690 Major Facilitator Superfamily J157_00423 PF01425 Amidase J157_00424 PF01156 Inosine-uridine preferring nucleoside hydrolase J157_00426 PF00860 Permease family J157_00427 PF00111 2Fe-2S iron-sulfur cluster binding domain J157_00428 PF00355 Rieske [2Fe-2S] domain J157_00429 PF03466 LysR substrate binding domain J157_00429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00430 PF01026 TatD related DNase J157_00433 PF03466 LysR substrate binding domain J157_00433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00434 PF07690 Major Facilitator Superfamily J157_00437 PF02146 Sir2 family J157_00438 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J157_00439 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J157_00439 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J157_00441 PF00551 Formyl transferase J157_00442 PF00486 Transcriptional regulatory protein, C terminal J157_00442 PF00072 Response regulator receiver domain J157_00443 PF00512 His Kinase A (phospho-acceptor) domain J157_00443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00443 PF00672 HAMP domain J157_00444 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_00444 PF00529 HlyD membrane-fusion protein of T1SS J157_00445 PF00873 AcrB/AcrD/AcrF family J157_00446 PF02321 Outer membrane efflux protein J157_00448 PF02219 Methylenetetrahydrofolate reductase J157_00449 PF02677 Epoxyqueuosine reductase QueH J157_00450 PF03466 LysR substrate binding domain J157_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00451 PF03358 NADPH-dependent FMN reductase J157_00453 PF01717 Cobalamin-independent synthase, Catalytic domain J157_00453 PF08267 Cobalamin-independent synthase, N-terminal domain J157_00454 PF03812 2-keto-3-deoxygluconate permease J157_00456 PF05368 NmrA-like family J157_00457 PF01638 HxlR-like helix-turn-helix J157_00461 PF00665 Integrase core domain J157_00461 PF13276 HTH-like domain J157_00461 PF13333 Integrase core domain J157_00462 PF01527 Transposase J157_00463 PF00589 Phage integrase family J157_00463 PF13495 Phage integrase, N-terminal SAM-like domain J157_00464 PF00920 Dehydratase family J157_00467 PF00132 Bacterial transferase hexapeptide (six repeats) J157_00468 PF07690 Major Facilitator Superfamily J157_00469 PF01966 HD domain J157_00469 PF11871 Domain of unknown function (DUF3391) J157_00473 PF00171 Aldehyde dehydrogenase family J157_00475 PF01494 FAD binding domain J157_00478 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J157_00478 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J157_00479 PF00230 Major intrinsic protein J157_00480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J157_00480 PF01266 FAD dependent oxidoreductase J157_00481 PF00455 DeoR C terminal sensor domain J157_00481 PF08220 DeoR-like helix-turn-helix domain J157_00483 PF00355 Rieske [2Fe-2S] domain J157_00484 PF01144 Coenzyme A transferase J157_00485 PF01144 Coenzyme A transferase J157_00486 PF00108 Thiolase, N-terminal domain J157_00486 PF02803 Thiolase, C-terminal domain J157_00487 PF00775 Dioxygenase J157_00487 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J157_00489 PF10397 Adenylosuccinate lyase C-terminus J157_00489 PF00206 Lyase J157_00490 PF12146 Serine aminopeptidase, S33 J157_00491 PF02627 Carboxymuconolactone decarboxylase family J157_00493 PF09339 IclR helix-turn-helix domain J157_00493 PF01614 Bacterial transcriptional regulator J157_00495 PF07859 alpha/beta hydrolase fold J157_00496 PF10677 Protein of unknown function (DUF2490) J157_00497 PF01134 Glucose inhibited division protein A J157_00497 PF13932 GidA associated domain J157_00499 PF00291 Pyridoxal-phosphate dependent enzyme J157_00503 PF13649 Methyltransferase domain J157_00505 PF12697 Alpha/beta hydrolase family J157_00507 PF00155 Aminotransferase class I and II J157_00508 PF06968 Biotin and Thiamin Synthesis associated domain J157_00508 PF04055 Radical SAM superfamily J157_00510 PF01040 UbiA prenyltransferase family J157_00514 PF05819 NolX protein J157_00522 PF01313 Bacterial export proteins, family 3 J157_00523 PF00813 FliP family J157_00526 PF00771 FHIPEP family J157_00527 PF01312 FlhB HrpN YscU SpaS Family J157_00530 PF01514 Secretory protein of YscJ/FliF family J157_00533 PF02874 ATP synthase alpha/beta family, beta-barrel domain J157_00533 PF18269 T3SS EscN ATPase C-terminal domain J157_00533 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J157_00535 PF01311 Bacterial export proteins, family 1 J157_00538 PF01464 Transglycosylase SLT domain J157_00541 PF00924 Mechanosensitive ion channel J157_00541 PF12795 Mechanosensitive ion channel porin domain J157_00541 PF12794 Mechanosensitive ion channel inner membrane domain 1 J157_00542 PF00884 Sulfatase J157_00543 PF03109 ABC1 family J157_00544 PF05661 Protein of unknown function (DUF808) J157_00545 PF00990 Diguanylate cyclase, GGDEF domain J157_00545 PF00072 Response regulator receiver domain J157_00546 PF08323 Starch synthase catalytic domain J157_00546 PF00534 Glycosyl transferases group 1 J157_00547 PF00128 Alpha amylase, catalytic domain J157_00547 PF02806 Alpha amylase, C-terminal all-beta domain J157_00547 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J157_00548 PF00128 Alpha amylase, catalytic domain J157_00548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J157_00548 PF11941 Domain of unknown function (DUF3459) J157_00549 PF02446 4-alpha-glucanotransferase J157_00550 PF00128 Alpha amylase, catalytic domain J157_00552 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J157_00552 PF00128 Alpha amylase, catalytic domain J157_00553 PF13460 NAD(P)H-binding J157_00556 PF06903 VirK protein J157_00557 PF02321 Outer membrane efflux protein J157_00560 PF00873 AcrB/AcrD/AcrF family J157_00563 PF00271 Helicase conserved C-terminal domain J157_00563 PF00270 DEAD/DEAH box helicase J157_00565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J157_00565 PF00364 Biotin-requiring enzyme J157_00565 PF02817 e3 binding domain J157_00567 PF02779 Transketolase, pyrimidine binding domain J157_00567 PF02780 Transketolase, C-terminal domain J157_00568 PF00676 Dehydrogenase E1 component J157_00570 PF03301 Tryptophan 2,3-dioxygenase J157_00571 PF00854 POT family J157_00573 PF01047 MarR family J157_00574 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J157_00575 PF04209 homogentisate 1,2-dioxygenase J157_00578 PF03334 Na+/H+ antiporter subunit J157_00579 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J157_00581 PF00361 Proton-conducting membrane transporter J157_00582 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J157_00583 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J157_00583 PF00361 Proton-conducting membrane transporter J157_00583 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J157_00583 PF13244 Domain of unknown function (DUF4040) J157_00586 PF02868 Thermolysin metallopeptidase, alpha-helical domain J157_00586 PF07504 Fungalysin/Thermolysin Propeptide Motif J157_00586 PF01483 Proprotein convertase P-domain J157_00586 PF01447 Thermolysin metallopeptidase, catalytic domain J157_00588 PF00182 Chitinase class I J157_00592 PF01259 SAICAR synthetase J157_00593 PF05099 Tellurite resistance protein TerB J157_00593 PF00226 DnaJ domain J157_00595 PF00834 Ribulose-phosphate 3 epimerase family J157_00596 PF00583 Acetyltransferase (GNAT) family J157_00597 PF00781 Diacylglycerol kinase catalytic domain J157_00598 PF04715 Anthranilate synthase component I, N terminal region J157_00598 PF00425 chorismate binding enzyme J157_00600 PF00117 Glutamine amidotransferase class-I J157_00602 PF00591 Glycosyl transferase family, a/b domain J157_00602 PF02885 Glycosyl transferase family, helical bundle domain J157_00603 PF00218 Indole-3-glycerol phosphate synthase J157_00605 PF00325 Bacterial regulatory proteins, crp family J157_00605 PF00027 Cyclic nucleotide-binding domain J157_00606 PF02675 S-adenosylmethionine decarboxylase J157_00607 PF00893 Small Multidrug Resistance protein J157_00608 PF03232 Ubiquinone biosynthesis protein COQ7 J157_00609 PF00572 Ribosomal protein L13 J157_00610 PF00380 Ribosomal protein S9/S16 J157_00613 PF00293 NUDIX domain J157_00614 PF00210 Ferritin-like domain J157_00615 PF00072 Response regulator receiver domain J157_00615 PF00672 HAMP domain J157_00615 PF01627 Hpt domain J157_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J157_00615 PF00512 His Kinase A (phospho-acceptor) domain J157_00616 PF00072 Response regulator receiver domain J157_00616 PF00486 Transcriptional regulatory protein, C terminal J157_00620 PF01521 Iron-sulphur cluster biosynthesis J157_00623 PF09297 NADH pyrophosphatase zinc ribbon domain J157_00623 PF00293 NUDIX domain J157_00623 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J157_00624 PF17113 Regulatory signalling modulator protein AmpE J157_00624 PF03186 CobD/Cbib protein J157_00627 PF07690 Major Facilitator Superfamily J157_00628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00628 PF03466 LysR substrate binding domain J157_00629 PF07690 Major Facilitator Superfamily J157_00630 PF12805 FUSC-like inner membrane protein yccS J157_00631 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J157_00631 PF02844 Phosphoribosylglycinamide synthetase, N domain J157_00631 PF02843 Phosphoribosylglycinamide synthetase, C domain J157_00633 PF02142 MGS-like domain J157_00633 PF01808 AICARFT/IMPCHase bienzyme J157_00634 PF01066 CDP-alcohol phosphatidyltransferase J157_00635 PF12147 Putative methyltransferase J157_00635 PF12146 Serine aminopeptidase, S33 J157_00636 PF00782 Dual specificity phosphatase, catalytic domain J157_00642 PF02954 Bacterial regulatory protein, Fis family J157_00645 PF01381 Helix-turn-helix J157_00650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J157_00650 PF02785 Biotin carboxylase C-terminal domain J157_00650 PF00289 Biotin carboxylase, N-terminal domain J157_00652 PF00364 Biotin-requiring enzyme J157_00653 PF01220 Dehydroquinase class II J157_00654 PF02683 Cytochrome C biogenesis protein transmembrane region J157_00654 PF11412 Disulphide bond corrector protein DsbC J157_00655 PF03091 CutA1 divalent ion tolerance protein J157_00658 PF01852 START domain J157_00660 PF00106 short chain dehydrogenase J157_00661 PF04231 Endonuclease I J157_00662 PF00166 Chaperonin 10 Kd subunit J157_00663 PF00118 TCP-1/cpn60 chaperonin family J157_00665 PF00593 TonB dependent receptor J157_00665 PF07715 TonB-dependent Receptor Plug Domain J157_00666 PF00793 DAHP synthetase I family J157_00669 PF08450 SMP-30/Gluconolactonase/LRE-like region J157_00671 PF08335 GlnD PII-uridylyltransferase J157_00671 PF03710 Glutamate-ammonia ligase adenylyltransferase J157_00672 PF02592 Putative vitamin uptake transporter J157_00675 PF00881 Nitroreductase family J157_00676 PF04264 YceI-like domain J157_00680 PF16957 Malonate decarboxylase, alpha subunit, transporter J157_00681 PF06857 Malonate decarboxylase delta subunit (MdcD) J157_00682 PF01039 Carboxyl transferase domain J157_00684 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J157_00685 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J157_00687 PF00698 Acyl transferase domain J157_00689 PF00392 Bacterial regulatory proteins, gntR family J157_00689 PF07729 FCD domain J157_00690 PF13419 Haloacid dehalogenase-like hydrolase J157_00696 PF07745 Glycosyl hydrolase family 53 J157_00697 PF00456 Transketolase, thiamine diphosphate binding domain J157_00697 PF17831 Pyruvate dehydrogenase E1 component middle domain J157_00698 PF00665 Integrase core domain J157_00698 PF13333 Integrase core domain J157_00698 PF13276 HTH-like domain J157_00699 PF01527 Transposase J157_00700 PF00106 short chain dehydrogenase J157_00703 PF00106 short chain dehydrogenase J157_00705 PF13409 Glutathione S-transferase, N-terminal domain J157_00710 PF12823 Domain of unknown function (DUF3817) J157_00710 PF03176 MMPL family J157_00711 PF00326 Prolyl oligopeptidase family J157_00711 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J157_00712 PF07759 Protein of unknown function (DUF1615) J157_00713 PF00990 Diguanylate cyclase, GGDEF domain J157_00713 PF05230 MASE2 domain J157_00717 PF00892 EamA-like transporter family J157_00718 PF00497 Bacterial extracellular solute-binding proteins, family 3 J157_00721 PF00324 Amino acid permease J157_00723 PF01544 CorA-like Mg2+ transporter protein J157_00725 PF01204 Trehalase J157_00727 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J157_00727 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J157_00732 PF08448 PAS fold J157_00732 PF00563 EAL domain J157_00732 PF00990 Diguanylate cyclase, GGDEF domain J157_00732 PF08447 PAS fold J157_00733 PF00672 HAMP domain J157_00733 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_00733 PF02203 Tar ligand binding domain homologue J157_00734 PF00150 Cellulase (glycosyl hydrolase family 5) J157_00734 PF00553 Cellulose binding domain J157_00735 PF01740 STAS domain J157_00735 PF00916 Sulfate permease family J157_00736 PF08448 PAS fold J157_00736 PF00990 Diguanylate cyclase, GGDEF domain J157_00739 PF13632 Glycosyl transferase family group 2 J157_00741 PF06580 Histidine kinase J157_00741 PF07694 5TMR of 5TMR-LYT J157_00742 PF00072 Response regulator receiver domain J157_00742 PF04397 LytTr DNA-binding domain J157_00743 PF03900 Porphobilinogen deaminase, C-terminal domain J157_00743 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J157_00748 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J157_00748 PF00326 Prolyl oligopeptidase family J157_00750 PF00155 Aminotransferase class I and II J157_00751 PF00326 Prolyl oligopeptidase family J157_00751 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J157_00752 PF04304 Protein of unknown function (DUF454) J157_00754 PF01678 Diaminopimelate epimerase J157_00756 PF02899 Phage integrase, N-terminal SAM-like domain J157_00756 PF00589 Phage integrase family J157_00757 PF00227 Proteasome subunit J157_00758 PF10431 C-terminal, D2-small domain, of ClpB protein J157_00758 PF00004 ATPase family associated with various cellular activities (AAA) J157_00758 PF07724 AAA domain (Cdc48 subfamily) J157_00760 PF13673 Acetyltransferase (GNAT) domain J157_00761 PF13533 Biotin-lipoyl like J157_00763 PF01209 ubiE/COQ5 methyltransferase family J157_00764 PF03707 Bacterial signalling protein N terminal repeat J157_00764 PF00990 Diguanylate cyclase, GGDEF domain J157_00764 PF00563 EAL domain J157_00765 PF01433 Peptidase family M1 domain J157_00765 PF11838 ERAP1-like C-terminal domain J157_00768 PF13360 PQQ-like domain J157_00769 PF00497 Bacterial extracellular solute-binding proteins, family 3 J157_00772 PF00107 Zinc-binding dehydrogenase J157_00772 PF08240 Alcohol dehydrogenase GroES-like domain J157_00774 PF01590 GAF domain J157_00774 PF00158 Sigma-54 interaction domain J157_00774 PF02954 Bacterial regulatory protein, Fis family J157_00775 PF00294 pfkB family carbohydrate kinase J157_00777 PF04085 rod shape-determining protein MreC J157_00779 PF03717 Penicillin-binding Protein dimerisation domain J157_00779 PF00905 Penicillin binding protein transpeptidase domain J157_00780 PF01098 Cell cycle protein J157_00781 PF00295 Glycosyl hydrolases family 28 J157_00782 PF13406 Transglycosylase SLT domain J157_00783 PF05036 Sporulation related domain J157_00783 PF03330 Lytic transglycolase J157_00784 PF07943 Penicillin-binding protein 5, C-terminal domain J157_00784 PF00768 D-alanyl-D-alanine carboxypeptidase J157_00786 PF04359 Protein of unknown function (DUF493) J157_00787 PF03099 Biotin/lipoate A/B protein ligase family J157_00788 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J157_00788 PF04055 Radical SAM superfamily J157_00789 PF17804 Tail specific protease N-terminal domain J157_00789 PF00595 PDZ domain J157_00789 PF11818 C-terminal domain of tail specific protease (DUF3340) J157_00789 PF03572 Peptidase family S41 J157_00791 PF03466 LysR substrate binding domain J157_00791 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_00793 PF00293 NUDIX domain J157_00793 PF01467 Cytidylyltransferase-like J157_00800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J157_00800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J157_00801 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J157_00801 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J157_00802 PF04972 BON domain J157_00803 PF01590 GAF domain J157_00803 PF00512 His Kinase A (phospho-acceptor) domain J157_00803 PF00360 Phytochrome region J157_00803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00803 PF08446 PAS fold J157_00804 PF00072 Response regulator receiver domain J157_00805 PF00512 His Kinase A (phospho-acceptor) domain J157_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00806 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J157_00807 PF00106 short chain dehydrogenase J157_00815 PF00263 Bacterial type II and III secretion system protein J157_00815 PF03958 Bacterial type II/III secretion system short domain J157_00816 PF00437 Type II/IV secretion system protein J157_00817 PF00482 Type II secretion system (T2SS), protein F J157_00818 PF08334 Type II secretion system (T2SS), protein G J157_00818 PF07963 Prokaryotic N-terminal methylation motif J157_00819 PF07963 Prokaryotic N-terminal methylation motif J157_00819 PF12019 Type II transport protein GspH J157_00821 PF07963 Prokaryotic N-terminal methylation motif J157_00821 PF11612 Type II secretion system (T2SS), protein J J157_00822 PF03934 Type II secretion system (T2SS), protein K J157_00828 PF16355 Domain of unknown function (DUF4982) J157_00828 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J157_00828 PF02837 Glycosyl hydrolases family 2, sugar binding domain J157_00828 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J157_00828 PF00703 Glycosyl hydrolases family 2 J157_00833 PF07690 Major Facilitator Superfamily J157_00834 PF00356 Bacterial regulatory proteins, lacI family J157_00835 PF01380 SIS domain J157_00836 PF01979 Amidohydrolase family J157_00838 PF01743 Poly A polymerase head domain J157_00838 PF12627 Probable RNA and SrmB- binding site of polymerase A J157_00838 PF01966 HD domain J157_00839 PF00732 GMC oxidoreductase J157_00839 PF05199 GMC oxidoreductase J157_00840 PF00171 Aldehyde dehydrogenase family J157_00841 PF02028 BCCT, betaine/carnitine/choline family transporter J157_00843 PF01323 DSBA-like thioredoxin domain J157_00846 PF00034 Cytochrome c J157_00847 PF01926 50S ribosome-binding GTPase J157_00848 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J157_00848 PF00753 Metallo-beta-lactamase superfamily J157_00848 PF10996 Beta-Casp domain J157_00850 PF04107 Glutamate-cysteine ligase family 2(GCS2) J157_00851 PF00512 His Kinase A (phospho-acceptor) domain J157_00851 PF00672 HAMP domain J157_00851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00852 PF00486 Transcriptional regulatory protein, C terminal J157_00852 PF00072 Response regulator receiver domain J157_00855 PF02583 Metal-sensitive transcriptional repressor J157_00856 PF08240 Alcohol dehydrogenase GroES-like domain J157_00856 PF00107 Zinc-binding dehydrogenase J157_00857 PF04828 Glutathione-dependent formaldehyde-activating enzyme J157_00858 PF00756 Putative esterase J157_00859 PF00155 Aminotransferase class I and II J157_00859 PF00392 Bacterial regulatory proteins, gntR family J157_00860 PF02567 Phenazine biosynthesis-like protein J157_00861 PF00892 EamA-like transporter family J157_00863 PF00005 ABC transporter J157_00863 PF12848 ABC transporter J157_00865 PF00464 Serine hydroxymethyltransferase J157_00866 PF03477 ATP cone domain J157_00868 PF01872 RibD C-terminal domain J157_00868 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J157_00871 PF00677 Lumazine binding domain J157_00872 PF00925 GTP cyclohydrolase II J157_00872 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J157_00873 PF00885 6,7-dimethyl-8-ribityllumazine synthase J157_00874 PF01029 NusB family J157_00875 PF02769 AIR synthase related protein, C-terminal domain J157_00875 PF00586 AIR synthase related protein, N-terminal domain J157_00879 PF03814 Potassium-transporting ATPase A subunit J157_00881 PF02669 K+-transporting ATPase, c chain J157_00882 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00882 PF13492 GAF domain J157_00882 PF02702 Osmosensitive K+ channel His kinase sensor domain J157_00882 PF00512 His Kinase A (phospho-acceptor) domain J157_00882 PF13493 Domain of unknown function (DUF4118) J157_00883 PF00072 Response regulator receiver domain J157_00883 PF00486 Transcriptional regulatory protein, C terminal J157_00886 PF02913 FAD linked oxidases, C-terminal domain J157_00886 PF01565 FAD binding domain J157_00887 PF04307 LexA-binding, inner membrane-associated putative hydrolase J157_00888 PF02021 Uncharacterised protein family UPF0102 J157_00890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J157_00895 PF02381 MraZ protein, putative antitoxin-like J157_00896 PF01795 MraW methylase family J157_00897 PF04999 Cell division protein FtsL J157_00898 PF00905 Penicillin binding protein transpeptidase domain J157_00898 PF03717 Penicillin-binding Protein dimerisation domain J157_00899 PF01225 Mur ligase family, catalytic domain J157_00899 PF08245 Mur ligase middle domain J157_00899 PF02875 Mur ligase family, glutamate ligase domain J157_00900 PF08245 Mur ligase middle domain J157_00900 PF01225 Mur ligase family, catalytic domain J157_00900 PF02875 Mur ligase family, glutamate ligase domain J157_00901 PF00953 Glycosyl transferase family 4 J157_00902 PF01098 Cell cycle protein J157_00903 PF03033 Glycosyltransferase family 28 N-terminal domain J157_00903 PF04101 Glycosyltransferase family 28 C-terminal domain J157_00904 PF01225 Mur ligase family, catalytic domain J157_00904 PF08245 Mur ligase middle domain J157_00904 PF02875 Mur ligase family, glutamate ligase domain J157_00905 PF07478 D-ala D-ala ligase C-terminus J157_00905 PF01820 D-ala D-ala ligase N-terminus J157_00906 PF03799 Cell division protein FtsQ J157_00906 PF08478 POTRA domain, FtsQ-type J157_00907 PF02491 SHS2 domain inserted in FTSA J157_00908 PF12327 FtsZ family, C-terminal domain J157_00908 PF00091 Tubulin/FtsZ family, GTPase domain J157_00909 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J157_00911 PF01476 LysM domain J157_00911 PF08525 Opacity-associated protein A N-terminal motif J157_00911 PF01551 Peptidase family M23 J157_00912 PF01043 SecA preprotein cross-linking domain J157_00912 PF07517 SecA DEAD-like domain J157_00912 PF02810 SEC-C motif J157_00912 PF07516 SecA Wing and Scaffold domain J157_00913 PF00293 NUDIX domain J157_00915 PF02219 Methylenetetrahydrofolate reductase J157_00918 PF00550 Phosphopantetheine attachment site J157_00918 PF14765 Polyketide synthase dehydratase J157_00918 PF08659 KR domain J157_00918 PF00698 Acyl transferase domain J157_00918 PF08240 Alcohol dehydrogenase GroES-like domain J157_00918 PF00107 Zinc-binding dehydrogenase J157_00918 PF16197 Ketoacyl-synthetase C-terminal extension J157_00918 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_00918 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_00919 PF00082 Subtilase family J157_00919 PF09286 Pro-kumamolisin, activation domain J157_00921 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J157_00922 PF00128 Alpha amylase, catalytic domain J157_00928 PF13649 Methyltransferase domain J157_00929 PF05221 S-adenosyl-L-homocysteine hydrolase J157_00929 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J157_00932 PF00311 Phosphoenolpyruvate carboxylase J157_00937 PF00328 Histidine phosphatase superfamily (branch 2) J157_00938 PF02772 S-adenosylmethionine synthetase, central domain J157_00938 PF02773 S-adenosylmethionine synthetase, C-terminal domain J157_00938 PF00438 S-adenosylmethionine synthetase, N-terminal domain J157_00940 PF13649 Methyltransferase domain J157_00941 PF01207 Dihydrouridine synthase (Dus) J157_00944 PF00294 pfkB family carbohydrate kinase J157_00945 PF07662 Na+ dependent nucleoside transporter C-terminus J157_00945 PF07670 Nucleoside recognition J157_00945 PF01773 Na+ dependent nucleoside transporter N-terminus J157_00946 PF00248 Aldo/keto reductase family J157_00948 PF00593 TonB dependent receptor J157_00948 PF07715 TonB-dependent Receptor Plug Domain J157_00953 PF00528 Binding-protein-dependent transport system inner membrane component J157_00954 PF00005 ABC transporter J157_00956 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J157_00958 PF00005 ABC transporter J157_00959 PF13472 GDSL-like Lipase/Acylhydrolase family J157_00960 PF00072 Response regulator receiver domain J157_00960 PF00486 Transcriptional regulatory protein, C terminal J157_00961 PF08521 Two-component sensor kinase N-terminal J157_00961 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_00961 PF00512 His Kinase A (phospho-acceptor) domain J157_00963 PF01219 Prokaryotic diacylglycerol kinase J157_00967 PF01790 Prolipoprotein diacylglyceryl transferase J157_00968 PF00303 Thymidylate synthase J157_00970 PF00186 Dihydrofolate reductase J157_00971 PF00158 Sigma-54 interaction domain J157_00972 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_00972 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J157_00973 PF00005 ABC transporter J157_00974 PF00528 Binding-protein-dependent transport system inner membrane component J157_00976 PF00296 Luciferase-like monooxygenase J157_00977 PF03358 NADPH-dependent FMN reductase J157_00981 PF00296 Luciferase-like monooxygenase J157_00982 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J157_00983 PF00528 Binding-protein-dependent transport system inner membrane component J157_00986 PF00005 ABC transporter J157_00986 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J157_00987 PF00149 Calcineurin-like phosphoesterase J157_00988 PF04379 ApaG domain J157_00989 PF00398 Ribosomal RNA adenine dimethylase J157_00990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J157_00991 PF09312 SurA N-terminal domain J157_00991 PF00639 PPIC-type PPIASE domain J157_00992 PF03968 OstA-like protein J157_00992 PF04453 LPS transport system D J157_00995 PF00850 Histone deacetylase domain J157_00996 PF01923 Cobalamin adenosyltransferase J157_00998 PF01494 FAD binding domain J157_00999 PF01494 FAD binding domain J157_01003 PF00392 Bacterial regulatory proteins, gntR family J157_01003 PF07729 FCD domain J157_01004 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J157_01005 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J157_01005 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J157_01006 PF03466 LysR substrate binding domain J157_01006 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01007 PF13193 AMP-binding enzyme C-terminal domain J157_01007 PF00501 AMP-binding enzyme J157_01008 PF00171 Aldehyde dehydrogenase family J157_01009 PF00378 Enoyl-CoA hydratase/isomerase J157_01013 PF08450 SMP-30/Gluconolactonase/LRE-like region J157_01014 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J157_01014 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J157_01015 PF01728 FtsJ-like methyltransferase J157_01015 PF18125 RlmM ferredoxin-like domain J157_01018 PF00892 EamA-like transporter family J157_01019 PF00749 tRNA synthetases class I (E and Q), catalytic domain J157_01019 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J157_01022 PF00990 Diguanylate cyclase, GGDEF domain J157_01022 PF00072 Response regulator receiver domain J157_01023 PF01627 Hpt domain J157_01023 PF00072 Response regulator receiver domain J157_01023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01023 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J157_01023 PF00672 HAMP domain J157_01023 PF00512 His Kinase A (phospho-acceptor) domain J157_01024 PF00072 Response regulator receiver domain J157_01024 PF00196 Bacterial regulatory proteins, luxR family J157_01026 PF01625 Peptide methionine sulfoxide reductase J157_01028 PF00923 Transaldolase/Fructose-6-phosphate aldolase J157_01029 PF14760 Rnk N-terminus J157_01029 PF01272 Transcription elongation factor, GreA/GreB, C-term J157_01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01030 PF03466 LysR substrate binding domain J157_01031 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_01031 PF13192 Thioredoxin domain J157_01032 PF10417 C-terminal domain of 1-Cys peroxiredoxin J157_01032 PF00578 AhpC/TSA family J157_01033 PF17827 PrmC N-terminal domain J157_01033 PF05175 Methyltransferase small domain J157_01034 PF00561 alpha/beta hydrolase fold J157_01036 PF00293 NUDIX domain J157_01037 PF01367 5'-3' exonuclease, C-terminal SAM fold J157_01037 PF00476 DNA polymerase family A J157_01037 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J157_01037 PF01612 3'-5' exonuclease J157_01043 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J157_01043 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J157_01043 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J157_01048 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J157_01049 PF02233 NAD(P) transhydrogenase beta subunit J157_01052 PF01063 Amino-transferase class IV J157_01053 PF04151 Bacterial pre-peptidase C-terminal domain J157_01053 PF00082 Subtilase family J157_01054 PF04151 Bacterial pre-peptidase C-terminal domain J157_01054 PF00082 Subtilase family J157_01055 PF04151 Bacterial pre-peptidase C-terminal domain J157_01055 PF00082 Subtilase family J157_01056 PF04073 Aminoacyl-tRNA editing domain J157_01058 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J157_01058 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J157_01059 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J157_01059 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J157_01061 PF03358 NADPH-dependent FMN reductase J157_01062 PF03631 Virulence factor BrkB J157_01063 PF08534 Redoxin J157_01064 PF00708 Acylphosphatase J157_01066 PF03976 Polyphosphate kinase 2 (PPK2) J157_01067 PF00994 Probable molybdopterin binding domain J157_01069 PF03462 PCRF domain J157_01069 PF00472 RF-1 domain J157_01070 PF01488 Shikimate / quinate 5-dehydrogenase J157_01070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J157_01070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J157_01072 PF03550 Outer membrane lipoprotein LolB J157_01073 PF08544 GHMP kinases C terminal J157_01073 PF00288 GHMP kinases N terminal domain J157_01075 PF14572 Phosphoribosyl synthetase-associated domain J157_01075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J157_01076 PF01386 Ribosomal L25p family J157_01076 PF14693 Ribosomal protein TL5, C-terminal domain J157_01077 PF01195 Peptidyl-tRNA hydrolase J157_01078 PF01926 50S ribosome-binding GTPase J157_01078 PF06071 Protein of unknown function (DUF933) J157_01082 PF03143 Elongation factor Tu C-terminal domain J157_01082 PF03144 Elongation factor Tu domain 2 J157_01082 PF00009 Elongation factor Tu GTP binding domain J157_01084 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J157_01085 PF00467 KOW motif J157_01085 PF02357 Transcription termination factor nusG J157_01086 PF03946 Ribosomal protein L11, N-terminal domain J157_01086 PF00298 Ribosomal protein L11, RNA binding domain J157_01087 PF00687 Ribosomal protein L1p/L10e family J157_01088 PF00466 Ribosomal protein L10 J157_01089 PF00542 Ribosomal protein L7/L12 C-terminal domain J157_01089 PF16320 Ribosomal protein L7/L12 dimerisation domain J157_01091 PF04563 RNA polymerase beta subunit J157_01091 PF00562 RNA polymerase Rpb2, domain 6 J157_01091 PF04561 RNA polymerase Rpb2, domain 2 J157_01091 PF04560 RNA polymerase Rpb2, domain 7 J157_01091 PF04565 RNA polymerase Rpb2, domain 3 J157_01091 PF10385 RNA polymerase beta subunit external 1 domain J157_01092 PF04983 RNA polymerase Rpb1, domain 3 J157_01092 PF00623 RNA polymerase Rpb1, domain 2 J157_01092 PF05000 RNA polymerase Rpb1, domain 4 J157_01092 PF04998 RNA polymerase Rpb1, domain 5 J157_01092 PF04997 RNA polymerase Rpb1, domain 1 J157_01093 PF00164 Ribosomal protein S12/S23 J157_01094 PF00177 Ribosomal protein S7p/S5e J157_01095 PF14492 Elongation Factor G, domain II J157_01095 PF00679 Elongation factor G C-terminus J157_01095 PF03764 Elongation factor G, domain IV J157_01095 PF00009 Elongation factor Tu GTP binding domain J157_01095 PF03144 Elongation factor Tu domain 2 J157_01096 PF03144 Elongation factor Tu domain 2 J157_01096 PF03143 Elongation factor Tu C-terminal domain J157_01096 PF00009 Elongation factor Tu GTP binding domain J157_01097 PF00338 Ribosomal protein S10p/S20e J157_01098 PF00297 Ribosomal protein L3 J157_01099 PF00573 Ribosomal protein L4/L1 family J157_01100 PF00276 Ribosomal protein L23 J157_01101 PF00181 Ribosomal Proteins L2, RNA binding domain J157_01101 PF03947 Ribosomal Proteins L2, C-terminal domain J157_01102 PF00203 Ribosomal protein S19 J157_01103 PF00237 Ribosomal protein L22p/L17e J157_01104 PF00189 Ribosomal protein S3, C-terminal domain J157_01104 PF07650 KH domain J157_01105 PF00252 Ribosomal protein L16p/L10e J157_01106 PF00831 Ribosomal L29 protein J157_01107 PF00366 Ribosomal protein S17 J157_01108 PF00238 Ribosomal protein L14p/L23e J157_01109 PF00467 KOW motif J157_01109 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J157_01110 PF00281 Ribosomal protein L5 J157_01110 PF00673 ribosomal L5P family C-terminus J157_01111 PF00253 Ribosomal protein S14p/S29e J157_01112 PF00410 Ribosomal protein S8 J157_01113 PF00347 Ribosomal protein L6 J157_01114 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J157_01115 PF03719 Ribosomal protein S5, C-terminal domain J157_01115 PF00333 Ribosomal protein S5, N-terminal domain J157_01116 PF00327 Ribosomal protein L30p/L7e J157_01117 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J157_01118 PF00344 SecY translocase J157_01119 PF00416 Ribosomal protein S13/S18 J157_01120 PF00411 Ribosomal protein S11 J157_01121 PF01479 S4 domain J157_01121 PF00163 Ribosomal protein S4/S9 N-terminal domain J157_01122 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J157_01122 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J157_01122 PF01000 RNA polymerase Rpb3/RpoA insert domain J157_01123 PF01196 Ribosomal protein L17 J157_01124 PF02600 Disulfide bond formation protein DsbB J157_01126 PF01474 Class-II DAHP synthetase family J157_01128 PF01425 Amidase J157_01131 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J157_01132 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J157_01132 PF00056 lactate/malate dehydrogenase, NAD binding domain J157_01133 PF02798 Glutathione S-transferase, N-terminal domain J157_01133 PF00043 Glutathione S-transferase, C-terminal domain J157_01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_01135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J157_01136 PF08240 Alcohol dehydrogenase GroES-like domain J157_01136 PF00107 Zinc-binding dehydrogenase J157_01137 PF05736 OprF membrane domain J157_01137 PF00691 OmpA family J157_01139 PF00849 RNA pseudouridylate synthase J157_01141 PF00155 Aminotransferase class I and II J157_01143 PF00528 Binding-protein-dependent transport system inner membrane component J157_01144 PF00528 Binding-protein-dependent transport system inner membrane component J157_01145 PF12857 TOBE-like domain J157_01145 PF00005 ABC transporter J157_01145 PF17850 CysA C-terminal regulatory domain J157_01147 PF08240 Alcohol dehydrogenase GroES-like domain J157_01147 PF00107 Zinc-binding dehydrogenase J157_01149 PF04185 Phosphoesterase family J157_01149 PF05506 Domain of unknown function (DUF756) J157_01150 PF10459 Peptidase S46 J157_01151 PF10459 Peptidase S46 J157_01152 PF00300 Histidine phosphatase superfamily (branch 1) J157_01153 PF08245 Mur ligase middle domain J157_01153 PF02875 Mur ligase family, glutamate ligase domain J157_01156 PF00156 Phosphoribosyl transferase domain J157_01157 PF04305 Protein of unknown function (DUF455) J157_01161 PF00149 Calcineurin-like phosphoesterase J157_01163 PF01569 PAP2 superfamily J157_01164 PF13439 Glycosyltransferase Family 4 J157_01164 PF00534 Glycosyl transferases group 1 J157_01165 PF02541 Ppx/GppA phosphatase family J157_01166 PF17941 Polyphosphate kinase C-terminal domain 1 J157_01166 PF13090 Polyphosphate kinase C-terminal domain 2 J157_01166 PF02503 Polyphosphate kinase middle domain J157_01166 PF13089 Polyphosphate kinase N-terminal domain J157_01167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01167 PF00512 His Kinase A (phospho-acceptor) domain J157_01167 PF00989 PAS fold J157_01167 PF11808 Phosphate regulon sensor protein PhoR J157_01168 PF00072 Response regulator receiver domain J157_01168 PF00486 Transcriptional regulatory protein, C terminal J157_01169 PF13181 Tetratricopeptide repeat J157_01169 PF01435 Peptidase family M48 J157_01170 PF00462 Glutaredoxin J157_01172 PF00180 Isocitrate/isopropylmalate dehydrogenase J157_01178 PF00665 Integrase core domain J157_01178 PF13333 Integrase core domain J157_01178 PF13276 HTH-like domain J157_01179 PF01527 Transposase J157_01202 PF01527 Transposase J157_01203 PF13333 Integrase core domain J157_01203 PF00665 Integrase core domain J157_01203 PF13276 HTH-like domain J157_01206 PF00512 His Kinase A (phospho-acceptor) domain J157_01206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01206 PF00989 PAS fold J157_01209 PF05698 Bacterial trigger factor protein (TF) C-terminus J157_01209 PF05697 Bacterial trigger factor protein (TF) J157_01210 PF00574 Clp protease J157_01211 PF06689 ClpX C4-type zinc finger J157_01211 PF10431 C-terminal, D2-small domain, of ClpB protein J157_01211 PF07724 AAA domain (Cdc48 subfamily) J157_01212 PF00004 ATPase family associated with various cellular activities (AAA) J157_01212 PF05362 Lon protease (S16) C-terminal proteolytic domain J157_01212 PF02190 ATP-dependent protease La (LON) substrate-binding domain J157_01213 PF00216 Bacterial DNA-binding protein J157_01219 PF01476 LysM domain J157_01219 PF05257 CHAP domain J157_01220 PF16123 Hydroxyacylglutathione hydrolase C-terminus J157_01220 PF00753 Metallo-beta-lactamase superfamily J157_01222 PF00075 RNase H J157_01223 PF00929 Exonuclease J157_01227 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J157_01229 PF12706 Beta-lactamase superfamily domain J157_01229 PF00753 Metallo-beta-lactamase superfamily J157_01230 PF06463 Molybdenum Cofactor Synthesis C J157_01230 PF04055 Radical SAM superfamily J157_01231 PF01967 MoaC family J157_01232 PF02597 ThiS family J157_01233 PF02391 MoaE protein J157_01236 PF01527 Transposase J157_01237 PF13333 Integrase core domain J157_01237 PF00665 Integrase core domain J157_01237 PF13276 HTH-like domain J157_01243 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J157_01243 PF12170 DNA polymerase III tau subunit V interacting with alpha J157_01243 PF12169 DNA polymerase III subunits gamma and tau domain III J157_01244 PF02575 YbaB/EbfC DNA-binding family J157_01245 PF13662 Toprim domain J157_01245 PF02132 RecR protein J157_01246 PF01230 HIT domain J157_01248 PF11992 Domain of unknown function (DUF3488) J157_01248 PF13559 Domain of unknown function (DUF4129) J157_01248 PF01841 Transglutaminase-like superfamily J157_01250 PF07726 ATPase family associated with various cellular activities (AAA) J157_01250 PF17863 AAA lid domain J157_01254 PF02545 Maf-like protein J157_01255 PF02620 Large ribosomal RNA subunit accumulation protein YceD J157_01256 PF01783 Ribosomal L32p protein family J157_01257 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J157_01257 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J157_01259 PF00698 Acyl transferase domain J157_01261 PF00550 Phosphopantetheine attachment site J157_01262 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_01262 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_01263 PF04715 Anthranilate synthase component I, N terminal region J157_01263 PF00425 chorismate binding enzyme J157_01264 PF02618 YceG-like family J157_01265 PF09115 DNA polymerase III, delta subunit, C terminal J157_01269 PF06506 Propionate catabolism activator J157_01269 PF02954 Bacterial regulatory protein, Fis family J157_01269 PF00158 Sigma-54 interaction domain J157_01271 PF00285 Citrate synthase, C-terminal domain J157_01272 PF00330 Aconitase family (aconitate hydratase) J157_01272 PF00694 Aconitase C-terminal domain J157_01273 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J157_01275 PF04303 PrpF protein J157_01276 PF00593 TonB dependent receptor J157_01276 PF07715 TonB-dependent Receptor Plug Domain J157_01278 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J157_01278 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J157_01278 PF00207 Alpha-2-macroglobulin family J157_01278 PF07703 Alpha-2-macroglobulin bait region domain J157_01278 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J157_01278 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J157_01278 PF17962 Bacterial macroglobulin domain 6 J157_01278 PF01835 MG2 domain J157_01281 PF06832 Penicillin-Binding Protein C-terminus Family J157_01281 PF00905 Penicillin binding protein transpeptidase domain J157_01281 PF00912 Transglycosylase J157_01283 PF08534 Redoxin J157_01285 PF01556 DnaJ C terminal domain J157_01285 PF00226 DnaJ domain J157_01287 PF00072 Response regulator receiver domain J157_01289 PF01145 SPFH domain / Band 7 family J157_01289 PF12221 Bacterial membrane protein N terminal J157_01290 PF01145 SPFH domain / Band 7 family J157_01292 PF00709 Adenylosuccinate synthetase J157_01293 PF11838 ERAP1-like C-terminal domain J157_01293 PF01433 Peptidase family M1 domain J157_01296 PF00440 Bacterial regulatory proteins, tetR family J157_01309 PF13456 Reverse transcriptase-like J157_01309 PF00300 Histidine phosphatase superfamily (branch 1) J157_01310 PF01256 Carbohydrate kinase J157_01312 PF00723 Glycosyl hydrolases family 15 J157_01314 PF07971 Glycosyl hydrolase family 92 J157_01314 PF17678 Glycosyl hydrolase family 92 N-terminal domain J157_01318 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_01322 PF17755 UvrA DNA-binding domain J157_01323 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J157_01323 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J157_01324 PF03450 CO dehydrogenase flavoprotein C-terminal domain J157_01324 PF00941 FAD binding domain in molybdopterin dehydrogenase J157_01325 PF00111 2Fe-2S iron-sulfur cluster binding domain J157_01325 PF01799 [2Fe-2S] binding domain J157_01332 PF00717 Peptidase S24-like J157_01332 PF01726 LexA DNA binding domain J157_01335 PF07733 Bacterial DNA polymerase III alpha NTPase domain J157_01335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J157_01335 PF02811 PHP domain J157_01335 PF14579 Helix-hairpin-helix motif J157_01336 PF00326 Prolyl oligopeptidase family J157_01338 PF03169 OPT oligopeptide transporter protein J157_01341 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J157_01341 PF07676 WD40-like Beta Propeller Repeat J157_01341 PF00326 Prolyl oligopeptidase family J157_01344 PF12833 Helix-turn-helix domain J157_01344 PF02311 AraC-like ligand binding domain J157_01349 PF18011 C-terminal domain found in long catalases J157_01349 PF06628 Catalase-related immune-responsive J157_01349 PF00199 Catalase J157_01350 PF00248 Aldo/keto reductase family J157_01351 PF00135 Carboxylesterase family J157_01352 PF02347 Glycine cleavage system P-protein J157_01355 PF07690 Major Facilitator Superfamily J157_01358 PF08019 Phosphoethanolamine transferase EptA/EptB J157_01358 PF00884 Sulfatase J157_01361 PF00486 Transcriptional regulatory protein, C terminal J157_01361 PF00072 Response regulator receiver domain J157_01362 PF08521 Two-component sensor kinase N-terminal J157_01362 PF00512 His Kinase A (phospho-acceptor) domain J157_01362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01364 PF03776 Septum formation topological specificity factor MinE J157_01365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J157_01366 PF03775 Septum formation inhibitor MinC, C-terminal domain J157_01366 PF05209 Septum formation inhibitor MinC, N-terminal domain J157_01368 PF07730 Histidine kinase J157_01369 PF00196 Bacterial regulatory proteins, luxR family J157_01369 PF00072 Response regulator receiver domain J157_01372 PF00730 HhH-GPD superfamily base excision DNA repair protein J157_01377 PF02222 ATP-grasp domain J157_01379 PF04376 Arginine-tRNA-protein transferase, N terminus J157_01379 PF04377 Arginine-tRNA-protein transferase, C terminus J157_01385 PF00378 Enoyl-CoA hydratase/isomerase J157_01388 PF17760 UvrA interaction domain J157_01388 PF17755 UvrA DNA-binding domain J157_01388 PF00005 ABC transporter J157_01389 PF00829 Ribosomal prokaryotic L21 protein J157_01390 PF01016 Ribosomal L27 protein J157_01391 PF01018 GTP1/OBG J157_01391 PF01926 50S ribosome-binding GTPase J157_01392 PF01649 Ribosomal protein S20 J157_01393 PF03023 Lipid II flippase MurJ J157_01394 PF06574 FAD synthetase J157_01394 PF01687 Riboflavin kinase J157_01395 PF00133 tRNA synthetases class I (I, L, M and V) J157_01395 PF08264 Anticodon-binding domain of tRNA J157_01395 PF06827 Zinc finger found in FPG and IleRS J157_01396 PF01252 Signal peptidase (SPase) II J157_01397 PF02401 LytB protein J157_01399 PF06481 COX Aromatic Rich Motif J157_01399 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J157_01400 PF00115 Cytochrome C and Quinol oxidase polypeptide I J157_01401 PF00510 Cytochrome c oxidase subunit III J157_01402 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J157_01404 PF18073 Rubredoxin metal binding domain J157_01405 PF05656 Protein of unknown function (DUF805) J157_01407 PF12833 Helix-turn-helix domain J157_01408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01408 PF00183 Hsp90 protein J157_01410 PF01740 STAS domain J157_01410 PF08678 Rsbr N terminal J157_01411 PF01740 STAS domain J157_01412 PF13581 Histidine kinase-like ATPase domain J157_01414 PF17149 Periplasmic sensor domain found in signal transduction proteins J157_01414 PF00672 HAMP domain J157_01414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01414 PF00512 His Kinase A (phospho-acceptor) domain J157_01414 PF01627 Hpt domain J157_01414 PF00072 Response regulator receiver domain J157_01415 PF00072 Response regulator receiver domain J157_01415 PF13188 PAS domain J157_01415 PF08448 PAS fold J157_01415 PF00512 His Kinase A (phospho-acceptor) domain J157_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01416 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J157_01416 PF04616 Glycosyl hydrolases family 43 J157_01417 PF07715 TonB-dependent Receptor Plug Domain J157_01417 PF00593 TonB dependent receptor J157_01418 PF00085 Thioredoxin J157_01419 PF07237 Protein of unknown function (DUF1428) J157_01420 PF02702 Osmosensitive K+ channel His kinase sensor domain J157_01420 PF00512 His Kinase A (phospho-acceptor) domain J157_01420 PF13493 Domain of unknown function (DUF4118) J157_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01420 PF13492 GAF domain J157_01421 PF01339 CheB methylesterase J157_01422 PF03705 CheR methyltransferase, all-alpha domain J157_01422 PF01739 CheR methyltransferase, SAM binding domain J157_01423 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J157_01423 PF01627 Hpt domain J157_01423 PF00512 His Kinase A (phospho-acceptor) domain J157_01423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01423 PF00072 Response regulator receiver domain J157_01423 PF00672 HAMP domain J157_01424 PF13426 PAS domain J157_01424 PF00072 Response regulator receiver domain J157_01424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01425 PF00072 Response regulator receiver domain J157_01426 PF00722 Glycosyl hydrolases family 16 J157_01427 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J157_01428 PF01263 Aldose 1-epimerase J157_01429 PF01578 Cytochrome C assembly protein J157_01430 PF02881 SRP54-type protein, helical bundle domain J157_01430 PF02978 Signal peptide binding domain J157_01430 PF00448 SRP54-type protein, GTPase domain J157_01431 PF03060 Nitronate monooxygenase J157_01432 PF01063 Amino-transferase class IV J157_01433 PF00886 Ribosomal protein S16 J157_01434 PF05239 PRC-barrel domain J157_01434 PF01782 RimM N-terminal domain J157_01435 PF01746 tRNA (Guanine-1)-methyltransferase J157_01436 PF01245 Ribosomal protein L19 J157_01437 PF01554 MatE J157_01438 PF01554 MatE J157_01441 PF01479 S4 domain J157_01442 PF00141 Peroxidase J157_01444 PF05192 MutS domain III J157_01444 PF00488 MutS domain V J157_01444 PF05190 MutS family domain IV J157_01444 PF05188 MutS domain II J157_01444 PF01624 MutS domain I J157_01447 PF05593 RHS Repeat J157_01447 PF03527 RHS protein J157_01451 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J157_01451 PF00703 Glycosyl hydrolases family 2 J157_01451 PF02837 Glycosyl hydrolases family 2, sugar binding domain J157_01451 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J157_01451 PF16355 Domain of unknown function (DUF4982) J157_01452 PF07745 Glycosyl hydrolase family 53 J157_01454 PF09856 Predicted transcriptional regulator (DUF2083) J157_01454 PF01381 Helix-turn-helix J157_01454 PF06114 IrrE N-terminal-like domain J157_01455 PF00171 Aldehyde dehydrogenase family J157_01456 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_01456 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_01456 PF02770 Acyl-CoA dehydrogenase, middle domain J157_01457 PF00378 Enoyl-CoA hydratase/isomerase J157_01458 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J157_01458 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J157_01458 PF00378 Enoyl-CoA hydratase/isomerase J157_01459 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J157_01459 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J157_01460 PF01545 Cation efflux family J157_01461 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J157_01461 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J157_01461 PF00378 Enoyl-CoA hydratase/isomerase J157_01462 PF04542 Sigma-70 region 2 J157_01462 PF08281 Sigma-70, region 4 J157_01464 PF13180 PDZ domain J157_01465 PF06421 GTP-binding protein LepA C-terminus J157_01465 PF00009 Elongation factor Tu GTP binding domain J157_01465 PF00679 Elongation factor G C-terminus J157_01465 PF03144 Elongation factor Tu domain 2 J157_01466 PF10502 Signal peptidase, peptidase S26 J157_01468 PF00035 Double-stranded RNA binding motif J157_01468 PF14622 Ribonuclease-III-like J157_01469 PF01926 50S ribosome-binding GTPase J157_01469 PF07650 KH domain J157_01470 PF02565 Recombination protein O C terminal J157_01470 PF11967 Recombination protein O N terminal J157_01472 PF05958 tRNA (Uracil-5-)-methyltransferase J157_01474 PF01323 DSBA-like thioredoxin domain J157_01475 PF01593 Flavin containing amine oxidoreductase J157_01476 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J157_01477 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_01479 PF01048 Phosphorylase superfamily J157_01480 PF00313 'Cold-shock' DNA-binding domain J157_01481 PF01494 FAD binding domain J157_01483 PF08494 DEAD/H associated J157_01483 PF00271 Helicase conserved C-terminal domain J157_01483 PF00270 DEAD/DEAH box helicase J157_01484 PF01068 ATP dependent DNA ligase domain J157_01484 PF04675 DNA ligase N terminus J157_01484 PF04679 ATP dependent DNA ligase C terminal region J157_01486 PF04679 ATP dependent DNA ligase C terminal region J157_01486 PF01068 ATP dependent DNA ligase domain J157_01486 PF04675 DNA ligase N terminus J157_01489 PF00990 Diguanylate cyclase, GGDEF domain J157_01489 PF00072 Response regulator receiver domain J157_01492 PF02803 Thiolase, C-terminal domain J157_01492 PF00108 Thiolase, N-terminal domain J157_01493 PF00082 Subtilase family J157_01493 PF12951 Passenger-associated-transport-repeat J157_01493 PF03797 Autotransporter beta-domain J157_01494 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J157_01494 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J157_01496 PF01863 Protein of unknown function DUF45 J157_01497 PF07043 Protein of unknown function (DUF1328) J157_01499 PF01258 Prokaryotic dksA/traR C4-type zinc finger J157_01503 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J157_01505 PF08274 PhnA Zinc-Ribbon J157_01505 PF03831 PhnA domain J157_01506 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J157_01507 PF07690 Major Facilitator Superfamily J157_01514 PF09924 Uncharacterised conserved protein (DUF2156) J157_01514 PF03706 Lysylphosphatidylglycerol synthase TM region J157_01517 PF01042 Endoribonuclease L-PSP J157_01526 PF04542 Sigma-70 region 2 J157_01526 PF04545 Sigma-70, region 4 J157_01529 PF04060 Putative Fe-S cluster J157_01531 PF01588 Putative tRNA binding domain J157_01531 PF09334 tRNA synthetases class I (M) J157_01534 PF13732 Domain of unknown function (DUF4162) J157_01534 PF00005 ABC transporter J157_01535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J157_01536 PF00324 Amino acid permease J157_01537 PF02574 Homocysteine S-methyltransferase J157_01539 PF02592 Putative vitamin uptake transporter J157_01543 PF03551 Transcriptional regulator PadR-like family J157_01550 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J157_01551 PF02811 PHP domain J157_01551 PF14579 Helix-hairpin-helix motif J157_01551 PF07733 Bacterial DNA polymerase III alpha NTPase domain J157_01551 PF01336 OB-fold nucleic acid binding domain J157_01551 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J157_01552 PF01351 Ribonuclease HII J157_01553 PF02684 Lipid-A-disaccharide synthetase J157_01554 PF00132 Bacterial transferase hexapeptide (six repeats) J157_01554 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J157_01555 PF07977 FabA-like domain J157_01556 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J157_01556 PF00132 Bacterial transferase hexapeptide (six repeats) J157_01558 PF07244 Surface antigen variable number repeat J157_01558 PF01103 Surface antigen J157_01559 PF17820 PDZ domain J157_01559 PF02163 Peptidase family M50 J157_01560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J157_01560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J157_01560 PF13288 DXP reductoisomerase C-terminal domain J157_01562 PF01255 Putative undecaprenyl diphosphate synthase J157_01563 PF01765 Ribosome recycling factor J157_01564 PF00696 Amino acid kinase family J157_01565 PF00072 Response regulator receiver domain J157_01565 PF00990 Diguanylate cyclase, GGDEF domain J157_01566 PF00889 Elongation factor TS J157_01567 PF00318 Ribosomal protein S2 J157_01574 PF00557 Metallopeptidase family M24 J157_01575 PF01909 Nucleotidyltransferase domain J157_01575 PF01966 HD domain J157_01575 PF08335 GlnD PII-uridylyltransferase J157_01576 PF00132 Bacterial transferase hexapeptide (six repeats) J157_01576 PF14602 Hexapeptide repeat of succinyl-transferase J157_01576 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J157_01577 PF03960 ArsC family J157_01578 PF01546 Peptidase family M20/M25/M40 J157_01578 PF07687 Peptidase dimerisation domain J157_01579 PF13537 Glutamine amidotransferase domain J157_01579 PF00733 Asparagine synthase J157_01581 PF00593 TonB dependent receptor J157_01581 PF07715 TonB-dependent Receptor Plug Domain J157_01583 PF01804 Penicillin amidase J157_01584 PF00210 Ferritin-like domain J157_01585 PF05724 Thiopurine S-methyltransferase (TPMT) J157_01587 PF00521 DNA gyrase/topoisomerase IV, subunit A J157_01587 PF03989 DNA gyrase C-terminal domain, beta-propeller J157_01590 PF02321 Outer membrane efflux protein J157_01591 PF00529 HlyD membrane-fusion protein of T1SS J157_01591 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_01592 PF07690 Major Facilitator Superfamily J157_01594 PF01915 Glycosyl hydrolase family 3 C-terminal domain J157_01594 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_01594 PF14310 Fibronectin type III-like domain J157_01596 PF00854 POT family J157_01601 PF12802 MarR family J157_01602 PF01432 Peptidase family M3 J157_01603 PF00255 Glutathione peroxidase J157_01604 PF00970 Oxidoreductase FAD-binding domain J157_01604 PF00175 Oxidoreductase NAD-binding domain J157_01605 PF00005 ABC transporter J157_01606 PF05683 Fumarase C-terminus J157_01606 PF05681 Fumarate hydratase (Fumerase) J157_01608 PF00484 Carbonic anhydrase J157_01609 PF02253 Phospholipase A1 J157_01611 PF00313 'Cold-shock' DNA-binding domain J157_01614 PF00899 ThiF family J157_01615 PF01026 TatD related DNase J157_01618 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_01618 PF02770 Acyl-CoA dehydrogenase, middle domain J157_01618 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_01620 PF00043 Glutathione S-transferase, C-terminal domain J157_01620 PF02798 Glutathione S-transferase, N-terminal domain J157_01621 PF13537 Glutamine amidotransferase domain J157_01621 PF00733 Asparagine synthase J157_01622 PF03358 NADPH-dependent FMN reductase J157_01623 PF03796 DnaB-like helicase C terminal domain J157_01623 PF00772 DnaB-like helicase N terminal domain J157_01624 PF03441 FAD binding domain of DNA photolyase J157_01624 PF00875 DNA photolyase J157_01625 PF05736 OprF membrane domain J157_01625 PF00691 OmpA family J157_01627 PF03466 LysR substrate binding domain J157_01627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01630 PF00529 HlyD membrane-fusion protein of T1SS J157_01630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_01631 PF00873 AcrB/AcrD/AcrF family J157_01632 PF00106 short chain dehydrogenase J157_01633 PF02321 Outer membrane efflux protein J157_01634 PF08448 PAS fold J157_01634 PF00990 Diguanylate cyclase, GGDEF domain J157_01636 PF00990 Diguanylate cyclase, GGDEF domain J157_01653 PF01527 Transposase J157_01662 PF00082 Subtilase family J157_01663 PF01668 SmpB protein J157_01664 PF03364 Polyketide cyclase / dehydrase and lipid transport J157_01665 PF03658 RnfH family Ubiquitin J157_01666 PF04355 SmpA / OmlA family J157_01667 PF01475 Ferric uptake regulator family J157_01668 PF02463 RecF/RecN/SMC N terminal domain J157_01669 PF01628 HrcA protein C terminal domain J157_01669 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J157_01670 PF01025 GrpE J157_01671 PF00012 Hsp70 protein J157_01672 PF01556 DnaJ C terminal domain J157_01672 PF00226 DnaJ domain J157_01672 PF00684 DnaJ central domain J157_01674 PF08543 Phosphomethylpyrimidine kinase J157_01679 PF00664 ABC transporter transmembrane region J157_01679 PF03412 Peptidase C39 family J157_01679 PF00005 ABC transporter J157_01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01680 PF03466 LysR substrate binding domain J157_01681 PF00005 ABC transporter J157_01681 PF00664 ABC transporter transmembrane region J157_01682 PF01205 Uncharacterized protein family UPF0029 J157_01683 PF03641 Possible lysine decarboxylase J157_01684 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_01684 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J157_01685 PF00364 Biotin-requiring enzyme J157_01685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J157_01685 PF02817 e3 binding domain J157_01686 PF16870 2-oxoglutarate dehydrogenase C-terminal J157_01686 PF02779 Transketolase, pyrimidine binding domain J157_01686 PF00676 Dehydrogenase E1 component J157_01686 PF16078 2-oxoglutarate dehydrogenase N-terminus J157_01688 PF08007 Cupin superfamily protein J157_01690 PF08328 Adenylosuccinate lyase C-terminal J157_01690 PF00206 Lyase J157_01692 PF01595 Cyclin M transmembrane N-terminal domain J157_01692 PF03471 Transporter associated domain J157_01692 PF00571 CBS domain J157_01693 PF00206 Lyase J157_01693 PF10415 Fumarase C C-terminus J157_01698 PF00005 ABC transporter J157_01699 PF00392 Bacterial regulatory proteins, gntR family J157_01701 PF00255 Glutathione peroxidase J157_01702 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J157_01702 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J157_01703 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J157_01703 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J157_01703 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J157_01704 PF04102 SlyX J157_01707 PF00356 Bacterial regulatory proteins, lacI family J157_01708 PF07690 Major Facilitator Superfamily J157_01709 PF00294 pfkB family carbohydrate kinase J157_01711 PF02607 B12 binding domain J157_01711 PF02965 Vitamin B12 dependent methionine synthase, activation domain J157_01711 PF02310 B12 binding domain J157_01711 PF00809 Pterin binding enzyme J157_01711 PF02574 Homocysteine S-methyltransferase J157_01712 PF00809 Pterin binding enzyme J157_01712 PF02574 Homocysteine S-methyltransferase J157_01713 PF01209 ubiE/COQ5 methyltransferase family J157_01714 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_01714 PF02770 Acyl-CoA dehydrogenase, middle domain J157_01714 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_01717 PF00575 S1 RNA binding domain J157_01717 PF17876 Cold shock domain J157_01717 PF00773 RNB domain J157_01717 PF08206 Ribonuclease B OB domain J157_01717 PF08461 Ribonuclease R winged-helix domain J157_01719 PF00588 SpoU rRNA Methylase family J157_01719 PF08032 RNA 2'-O ribose methyltransferase substrate binding J157_01720 PF00990 Diguanylate cyclase, GGDEF domain J157_01720 PF07694 5TMR of 5TMR-LYT J157_01721 PF00929 Exonuclease J157_01723 PF01895 PhoU domain J157_01724 PF00005 ABC transporter J157_01725 PF00528 Binding-protein-dependent transport system inner membrane component J157_01726 PF00528 Binding-protein-dependent transport system inner membrane component J157_01727 PF12849 PBP superfamily domain J157_01728 PF12849 PBP superfamily domain J157_01731 PF00484 Carbonic anhydrase J157_01732 PF00916 Sulfate permease family J157_01732 PF01740 STAS domain J157_01733 PF00730 HhH-GPD superfamily base excision DNA repair protein J157_01733 PF00633 Helix-hairpin-helix motif J157_01733 PF10576 Iron-sulfur binding domain of endonuclease III J157_01735 PF00378 Enoyl-CoA hydratase/isomerase J157_01736 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J157_01736 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J157_01737 PF00293 NUDIX domain J157_01738 PF00581 Rhodanese-like domain J157_01745 PF02926 THUMP domain J157_01745 PF10672 S-adenosylmethionine-dependent methyltransferase J157_01745 PF01170 Putative RNA methylase family UPF0020 J157_01746 PF01513 ATP-NAD kinase J157_01750 PF08411 Exonuclease C-terminal J157_01750 PF00929 Exonuclease J157_01751 PF01494 FAD binding domain J157_01752 PF00266 Aminotransferase class-V J157_01754 PF06052 3-hydroxyanthranilic acid dioxygenase J157_01755 PF00484 Carbonic anhydrase J157_01764 PF00072 Response regulator receiver domain J157_01764 PF00196 Bacterial regulatory proteins, luxR family J157_01767 PF04299 Putative FMN-binding domain J157_01771 PF00152 tRNA synthetases class II (D, K and N) J157_01771 PF01336 OB-fold nucleic acid binding domain J157_01772 PF01521 Iron-sulphur cluster biosynthesis J157_01773 PF01250 Ribosomal protein S6 J157_01774 PF01084 Ribosomal protein S18 J157_01775 PF01281 Ribosomal protein L9, N-terminal domain J157_01775 PF03948 Ribosomal protein L9, C-terminal domain J157_01776 PF02463 RecF/RecN/SMC N terminal domain J157_01777 PF04354 ZipA, C-terminal FtsZ-binding domain J157_01779 PF00155 Aminotransferase class I and II J157_01780 PF12826 Helix-hairpin-helix motif J157_01780 PF01653 NAD-dependent DNA ligase adenylation domain J157_01780 PF00533 BRCA1 C Terminus (BRCT) domain J157_01780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J157_01780 PF03120 NAD-dependent DNA ligase OB-fold domain J157_01781 PF00152 tRNA synthetases class II (D, K and N) J157_01783 PF01008 Initiation factor 2 subunit family J157_01784 PF03989 DNA gyrase C-terminal domain, beta-propeller J157_01784 PF00521 DNA gyrase/topoisomerase IV, subunit A J157_01785 PF13360 PQQ-like domain J157_01787 PF17392 Urocanase C-terminal domain J157_01787 PF17391 Urocanase N-terminal domain J157_01787 PF01175 Urocanase Rossmann-like domain J157_01789 PF00221 Aromatic amino acid lyase J157_01790 PF07969 Amidohydrolase family J157_01792 PF00392 Bacterial regulatory proteins, gntR family J157_01792 PF07702 UTRA domain J157_01798 PF01794 Ferric reductase like transmembrane component J157_01799 PF00174 Oxidoreductase molybdopterin binding domain J157_01800 PF00266 Aminotransferase class-V J157_01801 PF00800 Prephenate dehydratase J157_01801 PF01817 Chorismate mutase type II J157_01801 PF01842 ACT domain J157_01802 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J157_01804 PF03544 Gram-negative bacterial TonB protein C-terminal J157_01805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J157_01805 PF02403 Seryl-tRNA synthetase N-terminal domain J157_01806 PF02525 Flavodoxin-like fold J157_01807 PF03466 LysR substrate binding domain J157_01807 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01810 PF00672 HAMP domain J157_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_01810 PF02203 Tar ligand binding domain homologue J157_01813 PF00512 His Kinase A (phospho-acceptor) domain J157_01813 PF00072 Response regulator receiver domain J157_01813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01813 PF08448 PAS fold J157_01813 PF13188 PAS domain J157_01814 PF00486 Transcriptional regulatory protein, C terminal J157_01814 PF00072 Response regulator receiver domain J157_01815 PF06745 KaiC J157_01816 PF00072 Response regulator receiver domain J157_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01816 PF13426 PAS domain J157_01818 PF03918 Cytochrome C biogenesis protein J157_01819 PF08534 Redoxin J157_01820 PF01578 Cytochrome C assembly protein J157_01820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J157_01821 PF03100 CcmE J157_01823 PF01578 Cytochrome C assembly protein J157_01824 PF00082 Subtilase family J157_01826 PF08281 Sigma-70, region 4 J157_01826 PF04542 Sigma-70 region 2 J157_01829 PF00034 Cytochrome c J157_01832 PF05523 WxcM-like, C-terminal J157_01836 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J157_01837 PF01943 Polysaccharide biosynthesis protein J157_01838 PF00535 Glycosyl transferase family 2 J157_01841 PF08241 Methyltransferase domain J157_01845 PF00534 Glycosyl transferases group 1 J157_01845 PF13579 Glycosyl transferase 4-like domain J157_01848 PF00005 ABC transporter J157_01849 PF00664 ABC transporter transmembrane region J157_01849 PF00005 ABC transporter J157_01850 PF07690 Major Facilitator Superfamily J157_01851 PF00296 Luciferase-like monooxygenase J157_01853 PF03471 Transporter associated domain J157_01853 PF00571 CBS domain J157_01853 PF01595 Cyclin M transmembrane N-terminal domain J157_01855 PF01384 Phosphate transporter family J157_01858 PF00204 DNA gyrase B J157_01858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_01858 PF01751 Toprim domain J157_01858 PF00986 DNA gyrase B subunit, carboxyl terminus J157_01860 PF06418 CTP synthase N-terminus J157_01860 PF00117 Glutamine amidotransferase class-I J157_01861 PF00793 DAHP synthetase I family J157_01863 PF00113 Enolase, C-terminal TIM barrel domain J157_01863 PF03952 Enolase, N-terminal domain J157_01864 PF04977 Septum formation initiator J157_01865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J157_01866 PF02542 YgbB family J157_01867 PF01142 tRNA pseudouridine synthase D (TruD) J157_01868 PF01713 Smr domain J157_01869 PF01975 Survival protein SurE J157_01871 PF09335 SNARE associated Golgi protein J157_01872 PF01551 Peptidase family M23 J157_01872 PF01476 LysM domain J157_01874 PF04430 Protein of unknown function (DUF498/DUF598) J157_01875 PF01985 CRS1 / YhbY (CRM) domain J157_01876 PF01728 FtsJ-like methyltransferase J157_01877 PF00004 ATPase family associated with various cellular activities (AAA) J157_01877 PF17862 AAA+ lid domain J157_01877 PF06480 FtsH Extracellular J157_01877 PF01434 Peptidase family M41 J157_01878 PF00809 Pterin binding enzyme J157_01880 PF17209 Hfq protein J157_01881 PF01926 50S ribosome-binding GTPase J157_01881 PF13167 GTP-binding GTPase N-terminal J157_01881 PF16360 GTP-binding GTPase Middle Region J157_01882 PF02464 Competence-damaged protein J157_01883 PF03109 ABC1 family J157_01884 PF01726 LexA DNA binding domain J157_01884 PF00717 Peptidase S24-like J157_01885 PF00154 recA bacterial DNA recombination protein J157_01886 PF02631 RecX family J157_01887 PF01411 tRNA synthetases class II (A) J157_01887 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J157_01887 PF02272 DHHA1 domain J157_01888 PF02599 Global regulator protein family J157_01890 PF13426 PAS domain J157_01890 PF08447 PAS fold J157_01890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_01891 PF02678 Pirin J157_01891 PF17954 Quercetinase C-terminal cupin domain J157_01892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01892 PF03466 LysR substrate binding domain J157_01897 PF08543 Phosphomethylpyrimidine kinase J157_01897 PF02581 Thiamine monophosphate synthase J157_01900 PF02562 PhoH-like protein J157_01900 PF13638 PIN domain J157_01901 PF00578 AhpC/TSA family J157_01904 PF00701 Dihydrodipicolinate synthetase family J157_01906 PF11953 Domain of unknown function (DUF3470) J157_01906 PF00037 4Fe-4S binding domain J157_01907 PF05035 2-keto-3-deoxy-galactonokinase J157_01908 PF08450 SMP-30/Gluconolactonase/LRE-like region J157_01909 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J157_01909 PF13378 Enolase C-terminal domain-like J157_01910 PF01081 KDPG and KHG aldolase J157_01912 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_01912 PF03466 LysR substrate binding domain J157_01915 PF03442 Carbohydrate binding domain X2 J157_01915 PF00942 Cellulose binding domain J157_01918 PF16338 Domain of unknown function (DUF4968) J157_01918 PF17137 Domain of unknown function (DUF5110) J157_01918 PF01055 Glycosyl hydrolases family 31 J157_01920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J157_01920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J157_01922 PF00083 Sugar (and other) transporter J157_01925 PF01520 N-acetylmuramoyl-L-alanine amidase J157_01926 PF02649 Type I GTP cyclohydrolase folE2 J157_01930 PF12626 Polymerase A arginine-rich C-terminus J157_01930 PF12627 Probable RNA and SrmB- binding site of polymerase A J157_01930 PF01743 Poly A polymerase head domain J157_01931 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J157_01932 PF02548 Ketopantoate hydroxymethyltransferase J157_01933 PF02569 Pantoate-beta-alanine ligase J157_01934 PF02261 Aspartate decarboxylase J157_01935 PF00342 Phosphoglucose isomerase J157_01939 PF14310 Fibronectin type III-like domain J157_01939 PF01915 Glycosyl hydrolase family 3 C-terminal domain J157_01939 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_01940 PF00474 Sodium:solute symporter family J157_01941 PF00563 EAL domain J157_01941 PF01590 GAF domain J157_01941 PF00990 Diguanylate cyclase, GGDEF domain J157_01941 PF00360 Phytochrome region J157_01942 PF00150 Cellulase (glycosyl hydrolase family 5) J157_01942 PF02013 Cellulose or protein binding domain J157_01943 PF00072 Response regulator receiver domain J157_01945 PF04551 GcpE protein J157_01946 PF01569 PAP2 superfamily J157_01947 PF07690 Major Facilitator Superfamily J157_01948 PF01177 Asp/Glu/Hydantoin racemase J157_01949 PF00892 EamA-like transporter family J157_01950 PF01565 FAD binding domain J157_01950 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J157_01951 PF01180 Dihydroorotate dehydrogenase J157_01954 PF00171 Aldehyde dehydrogenase family J157_01957 PF00535 Glycosyl transferase family 2 J157_01958 PF01522 Polysaccharide deacetylase J157_01958 PF14883 Hypothetical glycosyl hydrolase family 13 J157_01960 PF08479 POTRA domain, ShlB-type J157_01960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J157_01960 PF17287 POTRA domain J157_01961 PF05594 Haemagluttinin repeat J157_01961 PF04829 Pre-toxin domain with VENN motif J157_01961 PF13332 Hemagglutinin repeat J157_01962 PF04829 Pre-toxin domain with VENN motif J157_01962 PF13332 Hemagglutinin repeat J157_01962 PF05594 Haemagluttinin repeat J157_01964 PF13018 Extended Signal Peptide of Type V secretion system J157_01964 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J157_01964 PF05594 Haemagluttinin repeat J157_01964 PF05860 haemagglutination activity domain J157_01964 PF13332 Hemagglutinin repeat J157_01966 PF01842 ACT domain J157_01966 PF03447 Homoserine dehydrogenase, NAD binding domain J157_01966 PF00696 Amino acid kinase family J157_01966 PF00742 Homoserine dehydrogenase J157_01966 PF13840 ACT domain J157_01967 PF00288 GHMP kinases N terminal domain J157_01967 PF08544 GHMP kinases C terminal J157_01969 PF14821 Threonine synthase N terminus J157_01969 PF00291 Pyridoxal-phosphate dependent enzyme J157_01971 PF13545 Crp-like helix-turn-helix domain J157_01971 PF00027 Cyclic nucleotide-binding domain J157_01972 PF13393 Histidyl-tRNA synthetase J157_01972 PF03129 Anticodon binding domain J157_01974 PF01634 ATP phosphoribosyltransferase J157_01974 PF08029 HisG, C-terminal domain J157_01975 PF00815 Histidinol dehydrogenase J157_01976 PF00155 Aminotransferase class I and II J157_01977 PF00475 Imidazoleglycerol-phosphate dehydratase J157_01978 PF00117 Glutamine amidotransferase class-I J157_01979 PF00977 Histidine biosynthesis protein J157_01980 PF00977 Histidine biosynthesis protein J157_01981 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J157_01981 PF01502 Phosphoribosyl-AMP cyclohydrolase J157_01985 PF03079 ARD/ARD' family J157_01986 PF00596 Class II Aldolase and Adducin N-terminal domain J157_01987 PF13520 Amino acid permease J157_01988 PF13520 Amino acid permease J157_01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J157_01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J157_01990 PF01842 ACT domain J157_01991 PF02913 FAD linked oxidases, C-terminal domain J157_01991 PF01565 FAD binding domain J157_01995 PF01132 Elongation factor P (EF-P) OB domain J157_01995 PF08207 Elongation factor P (EF-P) KOW-like domain J157_01995 PF09285 Elongation factor P, C-terminal J157_01996 PF00106 short chain dehydrogenase J157_01997 PF00682 HMGL-like J157_01999 PF00378 Enoyl-CoA hydratase/isomerase J157_02001 PF07670 Nucleoside recognition J157_02001 PF07664 Ferrous iron transport protein B C terminus J157_02001 PF02421 Ferrous iron transport protein B J157_02004 PF00155 Aminotransferase class I and II J157_02005 PF03473 MOSC domain J157_02005 PF03475 3-alpha domain J157_02006 PF05173 Dihydrodipicolinate reductase, C-terminus J157_02006 PF01113 Dihydrodipicolinate reductase, N-terminus J157_02007 PF00117 Glutamine amidotransferase class-I J157_02007 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J157_02009 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J157_02009 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J157_02009 PF02142 MGS-like domain J157_02010 PF01272 Transcription elongation factor, GreA/GreB, C-term J157_02010 PF03449 Transcription elongation factor, N-terminal J157_02012 PF17768 RecJ OB domain J157_02012 PF01368 DHH family J157_02012 PF02272 DHHA1 domain J157_02020 PF00072 Response regulator receiver domain J157_02020 PF04397 LytTr DNA-binding domain J157_02021 PF03462 PCRF domain J157_02021 PF00472 RF-1 domain J157_02022 PF00152 tRNA synthetases class II (D, K and N) J157_02022 PF01336 OB-fold nucleic acid binding domain J157_02023 PF00072 Response regulator receiver domain J157_02024 PF00512 His Kinase A (phospho-acceptor) domain J157_02024 PF01627 Hpt domain J157_02024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02024 PF00072 Response regulator receiver domain J157_02025 PF00378 Enoyl-CoA hydratase/isomerase J157_02026 PF00501 AMP-binding enzyme J157_02026 PF13193 AMP-binding enzyme C-terminal domain J157_02028 PF00694 Aconitase C-terminal domain J157_02028 PF00330 Aconitase family (aconitate hydratase) J157_02031 PF00330 Aconitase family (aconitate hydratase) J157_02031 PF11791 Aconitate B N-terminal domain J157_02031 PF06434 Aconitate hydratase 2 N-terminus J157_02032 PF00561 alpha/beta hydrolase fold J157_02033 PF03707 Bacterial signalling protein N terminal repeat J157_02033 PF00990 Diguanylate cyclase, GGDEF domain J157_02033 PF00563 EAL domain J157_02034 PF01339 CheB methylesterase J157_02034 PF00072 Response regulator receiver domain J157_02035 PF03975 CheD chemotactic sensory transduction J157_02036 PF01739 CheR methyltransferase, SAM binding domain J157_02036 PF03705 CheR methyltransferase, all-alpha domain J157_02037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02037 PF02203 Tar ligand binding domain homologue J157_02037 PF00672 HAMP domain J157_02038 PF00672 HAMP domain J157_02038 PF02203 Tar ligand binding domain homologue J157_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02039 PF02203 Tar ligand binding domain homologue J157_02039 PF00672 HAMP domain J157_02040 PF02203 Tar ligand binding domain homologue J157_02040 PF00672 HAMP domain J157_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02041 PF02203 Tar ligand binding domain homologue J157_02041 PF00672 HAMP domain J157_02042 PF02203 Tar ligand binding domain homologue J157_02042 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02042 PF00672 HAMP domain J157_02043 PF00672 HAMP domain J157_02043 PF02203 Tar ligand binding domain homologue J157_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02044 PF02203 Tar ligand binding domain homologue J157_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02044 PF00672 HAMP domain J157_02047 PF02203 Tar ligand binding domain homologue J157_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02047 PF00672 HAMP domain J157_02048 PF00672 HAMP domain J157_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02048 PF17200 Single Cache domain 2 J157_02048 PF17200 Single Cache domain 2 J157_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02048 PF00672 HAMP domain J157_02050 PF00672 HAMP domain J157_02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02050 PF02203 Tar ligand binding domain homologue J157_02051 PF02895 Signal transducing histidine kinase, homodimeric domain J157_02051 PF01584 CheW-like domain J157_02051 PF09078 CheY binding J157_02051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02051 PF01627 Hpt domain J157_02052 PF00072 Response regulator receiver domain J157_02054 PF01584 CheW-like domain J157_02055 PF13614 AAA domain J157_02056 PF00691 OmpA family J157_02056 PF13677 Membrane MotB of proton-channel complex MotA/MotB J157_02057 PF01618 MotA/TolQ/ExbB proton channel family J157_02060 PF00069 Protein kinase domain J157_02060 PF03793 PASTA domain J157_02069 PF00665 Integrase core domain J157_02069 PF13276 HTH-like domain J157_02069 PF13333 Integrase core domain J157_02070 PF01527 Transposase J157_02076 PF04055 Radical SAM superfamily J157_02076 PF13186 Iron-sulfur cluster-binding domain J157_02079 PF02895 Signal transducing histidine kinase, homodimeric domain J157_02079 PF07194 P2 response regulator binding domain J157_02079 PF01584 CheW-like domain J157_02079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02079 PF01627 Hpt domain J157_02080 PF04344 Chemotaxis phosphatase, CheZ J157_02081 PF00072 Response regulator receiver domain J157_02082 PF04542 Sigma-70 region 2 J157_02082 PF04539 Sigma-70 region 3 J157_02082 PF04545 Sigma-70, region 4 J157_02083 PF10609 NUBPL iron-transfer P-loop NTPase J157_02084 PF00448 SRP54-type protein, GTPase domain J157_02085 PF00771 FHIPEP family J157_02086 PF01312 FlhB HrpN YscU SpaS Family J157_02087 PF03707 Bacterial signalling protein N terminal repeat J157_02087 PF00563 EAL domain J157_02087 PF00990 Diguanylate cyclase, GGDEF domain J157_02088 PF03707 Bacterial signalling protein N terminal repeat J157_02088 PF13188 PAS domain J157_02088 PF00990 Diguanylate cyclase, GGDEF domain J157_02088 PF00563 EAL domain J157_02089 PF13188 PAS domain J157_02089 PF00563 EAL domain J157_02089 PF00990 Diguanylate cyclase, GGDEF domain J157_02089 PF03707 Bacterial signalling protein N terminal repeat J157_02090 PF01311 Bacterial export proteins, family 1 J157_02091 PF01313 Bacterial export proteins, family 3 J157_02093 PF00813 FliP family J157_02094 PF04347 Flagellar biosynthesis protein, FliO J157_02095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J157_02096 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J157_02096 PF02154 Flagellar motor switch protein FliM J157_02100 PF18269 T3SS EscN ATPase C-terminal domain J157_02100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J157_02102 PF14842 FliG N-terminal domain J157_02102 PF14841 FliG middle domain J157_02102 PF01706 FliG C-terminal domain J157_02103 PF08345 Flagellar M-ring protein C-terminal J157_02103 PF01514 Secretory protein of YscJ/FliF family J157_02104 PF02049 Flagellar hook-basal body complex protein FliE J157_02105 PF00535 Glycosyl transferase family 2 J157_02105 PF00534 Glycosyl transferases group 1 J157_02113 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J157_02113 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J157_02115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J157_02116 PF00158 Sigma-54 interaction domain J157_02116 PF02954 Bacterial regulatory protein, Fis family J157_02116 PF00072 Response regulator receiver domain J157_02117 PF00072 Response regulator receiver domain J157_02117 PF01339 CheB methylesterase J157_02118 PF04552 Sigma-54, DNA binding domain J157_02118 PF04963 Sigma-54 factor, core binding domain J157_02118 PF00309 Sigma-54 factor, Activator interacting domain (AID) J157_02119 PF00072 Response regulator receiver domain J157_02119 PF00196 Bacterial regulatory proteins, luxR family J157_02122 PF02561 Flagellar protein FliS J157_02123 PF07195 Flagellar hook-associated protein 2 C-terminus J157_02123 PF07196 Flagellin hook IN motif J157_02123 PF02465 Flagellar hook-associated protein 2 N-terminus J157_02124 PF00669 Bacterial flagellin N-terminal helical region J157_02124 PF00700 Bacterial flagellin C-terminal helical region J157_02125 PF00669 Bacterial flagellin N-terminal helical region J157_02125 PF00700 Bacterial flagellin C-terminal helical region J157_02126 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J157_02126 PF07196 Flagellin hook IN motif J157_02127 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J157_02127 PF10135 Rod binding protein J157_02128 PF02119 Flagellar P-ring protein J157_02129 PF02107 Flagellar L-ring protein J157_02130 PF00460 Flagella basal body rod protein J157_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J157_02131 PF00460 Flagella basal body rod protein J157_02131 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J157_02132 PF00460 Flagella basal body rod protein J157_02132 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J157_02132 PF07559 Flagellar basal body protein FlaE J157_02133 PF03963 Flagellar hook capping protein - N-terminal region J157_02134 PF00460 Flagella basal body rod protein J157_02134 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J157_02136 PF00072 Response regulator receiver domain J157_02136 PF01584 CheW-like domain J157_02140 PF00989 PAS fold J157_02140 PF00512 His Kinase A (phospho-acceptor) domain J157_02140 PF13188 PAS domain J157_02140 PF13426 PAS domain J157_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02141 PF00563 EAL domain J157_02141 PF00990 Diguanylate cyclase, GGDEF domain J157_02141 PF03707 Bacterial signalling protein N terminal repeat J157_02142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02142 PF07730 Histidine kinase J157_02143 PF00563 EAL domain J157_02143 PF00990 Diguanylate cyclase, GGDEF domain J157_02143 PF03707 Bacterial signalling protein N terminal repeat J157_02145 PF00672 HAMP domain J157_02145 PF12729 Four helix bundle sensory module for signal transduction J157_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02146 PF04356 Protein of unknown function (DUF489) J157_02148 PF00293 NUDIX domain J157_02149 PF02617 ATP-dependent Clp protease adaptor protein ClpS J157_02150 PF00004 ATPase family associated with various cellular activities (AAA) J157_02150 PF07724 AAA domain (Cdc48 subfamily) J157_02150 PF17871 AAA lid domain J157_02150 PF02861 Clp amino terminal domain, pathogenicity island component J157_02150 PF10431 C-terminal, D2-small domain, of ClpB protein J157_02151 PF01176 Translation initiation factor 1A / IF-1 J157_02152 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J157_02154 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_02155 PF09397 Ftsk gamma domain J157_02155 PF17854 FtsK alpha domain J157_02155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J157_02155 PF01580 FtsK/SpoIIIE family J157_02157 PF03548 Outer membrane lipoprotein carrier protein LolA J157_02159 PF12002 MgsA AAA+ ATPase C terminal J157_02159 PF16193 AAA C-terminal domain J157_02159 PF00004 ATPase family associated with various cellular activities (AAA) J157_02161 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J157_02163 PF00108 Thiolase, N-terminal domain J157_02163 PF02803 Thiolase, C-terminal domain J157_02164 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J157_02164 PF00378 Enoyl-CoA hydratase/isomerase J157_02164 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J157_02166 PF00334 Nucleoside diphosphate kinase J157_02167 PF04055 Radical SAM superfamily J157_02169 PF13464 Domain of unknown function (DUF4115) J157_02171 PF01011 PQQ enzyme repeat J157_02171 PF13360 PQQ-like domain J157_02172 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J157_02172 PF01926 50S ribosome-binding GTPase J157_02173 PF00994 Probable molybdopterin binding domain J157_02173 PF03454 MoeA C-terminal region (domain IV) J157_02173 PF03453 MoeA N-terminal region (domain I and II) J157_02174 PF00899 ThiF family J157_02179 PF00107 Zinc-binding dehydrogenase J157_02179 PF08240 Alcohol dehydrogenase GroES-like domain J157_02179 PF13823 Alcohol dehydrogenase GroES-associated J157_02181 PF03372 Endonuclease/Exonuclease/phosphatase family J157_02183 PF03454 MoeA C-terminal region (domain IV) J157_02183 PF00994 Probable molybdopterin binding domain J157_02183 PF03453 MoeA N-terminal region (domain I and II) J157_02184 PF12804 MobA-like NTP transferase domain J157_02186 PF00561 alpha/beta hydrolase fold J157_02187 PF01566 Natural resistance-associated macrophage protein J157_02188 PF02742 Iron dependent repressor, metal binding and dimerisation domain J157_02188 PF01325 Iron dependent repressor, N-terminal DNA binding domain J157_02189 PF14437 MafB19-like deaminase J157_02190 PF00929 Exonuclease J157_02191 PF00924 Mechanosensitive ion channel J157_02191 PF05552 Conserved TM helix J157_02192 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J157_02192 PF02896 PEP-utilising enzyme, TIM barrel domain J157_02192 PF00391 PEP-utilising enzyme, mobile domain J157_02193 PF03618 Kinase/pyrophosphorylase J157_02197 PF01066 CDP-alcohol phosphatidyltransferase J157_02199 PF00561 alpha/beta hydrolase fold J157_02202 PF00355 Rieske [2Fe-2S] domain J157_02202 PF01266 FAD dependent oxidoreductase J157_02204 PF17674 HHH domain J157_02204 PF00575 S1 RNA binding domain J157_02204 PF16921 Tex protein YqgF-like domain J157_02204 PF09371 Tex-like protein N-terminal domain J157_02205 PF00072 Response regulator receiver domain J157_02205 PF09308 LuxQ, periplasmic J157_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02205 PF00512 His Kinase A (phospho-acceptor) domain J157_02213 PF00034 Cytochrome c J157_02215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_02216 PF00873 AcrB/AcrD/AcrF family J157_02217 PF00873 AcrB/AcrD/AcrF family J157_02218 PF01081 KDPG and KHG aldolase J157_02219 PF00920 Dehydratase family J157_02220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J157_02221 PF02685 Glucokinase J157_02222 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J157_02222 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J157_02223 PF17912 MalK OB fold domain J157_02223 PF00005 ABC transporter J157_02226 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J157_02227 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J157_02228 PF02910 Fumarate reductase flavoprotein C-term J157_02228 PF00890 FAD binding domain J157_02230 PF13085 2Fe-2S iron-sulfur cluster binding domain J157_02231 PF03937 Flavinator of succinate dehydrogenase J157_02233 PF12704 MacB-like periplasmic core domain J157_02233 PF02687 FtsX-like permease family J157_02234 PF00005 ABC transporter J157_02236 PF00753 Metallo-beta-lactamase superfamily J157_02236 PF03772 Competence protein J157_02237 PF01618 MotA/TolQ/ExbB proton channel family J157_02238 PF02472 Biopolymer transport protein ExbD/TolR J157_02239 PF00005 ABC transporter J157_02239 PF00664 ABC transporter transmembrane region J157_02240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J157_02241 PF02348 Cytidylyltransferase J157_02242 PF01451 Low molecular weight phosphotyrosine protein phosphatase J157_02244 PF08459 UvrC Helix-hairpin-helix N-terminal J157_02244 PF01541 GIY-YIG catalytic domain J157_02244 PF02151 UvrB/uvrC motif J157_02245 PF01066 CDP-alcohol phosphatidyltransferase J157_02249 PF00550 Phosphopantetheine attachment site J157_02249 PF13193 AMP-binding enzyme C-terminal domain J157_02249 PF00501 AMP-binding enzyme J157_02249 PF00668 Condensation domain J157_02250 PF00550 Phosphopantetheine attachment site J157_02250 PF13193 AMP-binding enzyme C-terminal domain J157_02250 PF00975 Thioesterase domain J157_02250 PF00668 Condensation domain J157_02250 PF00501 AMP-binding enzyme J157_02252 PF01527 Transposase J157_02254 PF01527 Transposase J157_02255 PF00589 Phage integrase family J157_02257 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J157_02257 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J157_02257 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J157_02259 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J157_02262 PF00196 Bacterial regulatory proteins, luxR family J157_02262 PF00072 Response regulator receiver domain J157_02263 PF00575 S1 RNA binding domain J157_02263 PF10150 Ribonuclease E/G family J157_02263 PF12111 Polyribonucleotide phosphorylase C terminal J157_02264 PF00849 RNA pseudouridylate synthase J157_02264 PF01479 S4 domain J157_02265 PF11737 Protein of unknown function (DUF3300) J157_02266 PF02535 ZIP Zinc transporter J157_02268 PF01329 Pterin 4 alpha carbinolamine dehydratase J157_02269 PF01106 NifU-like domain J157_02278 PF08241 Methyltransferase domain J157_02278 PF12697 Alpha/beta hydrolase family J157_02280 PF00106 short chain dehydrogenase J157_02283 PF13333 Integrase core domain J157_02283 PF00665 Integrase core domain J157_02283 PF13276 HTH-like domain J157_02284 PF01527 Transposase J157_02285 PF01494 FAD binding domain J157_02286 PF09335 SNARE associated Golgi protein J157_02288 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J157_02289 PF07995 Glucose / Sorbosone dehydrogenase J157_02291 PF00144 Beta-lactamase J157_02292 PF00072 Response regulator receiver domain J157_02292 PF04397 LytTr DNA-binding domain J157_02293 PF06580 Histidine kinase J157_02293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02293 PF07694 5TMR of 5TMR-LYT J157_02295 PF00082 Subtilase family J157_02295 PF03797 Autotransporter beta-domain J157_02296 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_02297 PF00873 AcrB/AcrD/AcrF family J157_02299 PF00512 His Kinase A (phospho-acceptor) domain J157_02299 PF13426 PAS domain J157_02299 PF00072 Response regulator receiver domain J157_02299 PF08448 PAS fold J157_02299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02300 PF00196 Bacterial regulatory proteins, luxR family J157_02300 PF00072 Response regulator receiver domain J157_02301 PF12951 Passenger-associated-transport-repeat J157_02301 PF12951 Passenger-associated-transport-repeat J157_02302 PF00990 Diguanylate cyclase, GGDEF domain J157_02302 PF00563 EAL domain J157_02302 PF08447 PAS fold J157_02302 PF08448 PAS fold J157_02305 PF05974 Domain of unknown function (DUF892) J157_02307 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J157_02309 PF14824 Sirohaem biosynthesis protein central J157_02309 PF10414 Sirohaem synthase dimerisation region J157_02309 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J157_02312 PF05977 Transmembrane secretion effector J157_02313 PF07969 Amidohydrolase family J157_02315 PF00857 Isochorismatase family J157_02318 PF00196 Bacterial regulatory proteins, luxR family J157_02318 PF00072 Response regulator receiver domain J157_02321 PF03466 LysR substrate binding domain J157_02321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_02322 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J157_02322 PF00361 Proton-conducting membrane transporter J157_02322 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J157_02323 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J157_02324 PF13276 HTH-like domain J157_02324 PF13333 Integrase core domain J157_02324 PF00665 Integrase core domain J157_02325 PF01527 Transposase J157_02326 PF01381 Helix-turn-helix J157_02327 PF05284 Protein of unknown function (DUF736) J157_02328 PF04002 RadC-like JAB domain J157_02333 PF13356 Arm DNA-binding domain J157_02333 PF00589 Phage integrase family J157_02336 PF00593 TonB dependent receptor J157_02336 PF07715 TonB-dependent Receptor Plug Domain J157_02340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J157_02345 PF07715 TonB-dependent Receptor Plug Domain J157_02345 PF00593 TonB dependent receptor J157_02348 PF10947 Protein of unknown function (DUF2628) J157_02350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J157_02350 PF00722 Glycosyl hydrolases family 16 J157_02355 PF03412 Peptidase C39 family J157_02355 PF00005 ABC transporter J157_02355 PF00664 ABC transporter transmembrane region J157_02357 PF13614 AAA domain J157_02365 PF01131 DNA topoisomerase J157_02365 PF01751 Toprim domain J157_02366 PF01131 DNA topoisomerase J157_02366 PF01751 Toprim domain J157_02367 PF00145 C-5 cytosine-specific DNA methylase J157_02379 PF17761 DUF1016 N-terminal domain J157_02379 PF06250 YhcG PDDEXK nuclease domain J157_02380 PF01527 Transposase J157_02381 PF13276 HTH-like domain J157_02381 PF00665 Integrase core domain J157_02381 PF13333 Integrase core domain J157_02382 PF00892 EamA-like transporter family J157_02383 PF00892 EamA-like transporter family J157_02385 PF02525 Flavodoxin-like fold J157_02386 PF00043 Glutathione S-transferase, C-terminal domain J157_02386 PF02798 Glutathione S-transferase, N-terminal domain J157_02387 PF05544 Proline racemase J157_02388 PF03358 NADPH-dependent FMN reductase J157_02390 PF07690 Major Facilitator Superfamily J157_02391 PF02311 AraC-like ligand binding domain J157_02391 PF12833 Helix-turn-helix domain J157_02421 PF00580 UvrD/REP helicase N-terminal domain J157_02421 PF12462 DNA helicase IV / RNA helicase N terminal J157_02421 PF13361 UvrD-like helicase C-terminal domain J157_02436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_02436 PF03466 LysR substrate binding domain J157_02437 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J157_02437 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J157_02438 PF03401 Tripartite tricarboxylate transporter family receptor J157_02442 PF04002 RadC-like JAB domain J157_02449 PF00589 Phage integrase family J157_02449 PF13356 Arm DNA-binding domain J157_02450 PF00958 GMP synthase C terminal domain J157_02450 PF00117 Glutamine amidotransferase class-I J157_02450 PF02540 NAD synthase J157_02451 PF00478 IMP dehydrogenase / GMP reductase domain J157_02451 PF00571 CBS domain J157_02452 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J157_02452 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J157_02454 PF02254 TrkA-N domain J157_02454 PF00999 Sodium/hydrogen exchanger family J157_02455 PF00483 Nucleotidyl transferase J157_02456 PF02719 Polysaccharide biosynthesis protein J157_02457 PF00953 Glycosyl transferase family 4 J157_02458 PF18073 Rubredoxin metal binding domain J157_02460 PF00216 Bacterial DNA-binding protein J157_02461 PF00575 S1 RNA binding domain J157_02462 PF02224 Cytidylate kinase J157_02463 PF00444 Ribosomal protein L36 J157_02466 PF04371 Porphyromonas-type peptidyl-arginine deiminase J157_02467 PF00795 Carbon-nitrogen hydrolase J157_02472 PF00528 Binding-protein-dependent transport system inner membrane component J157_02473 PF00528 Binding-protein-dependent transport system inner membrane component J157_02477 PF00356 Bacterial regulatory proteins, lacI family J157_02479 PF03795 YCII-related domain J157_02480 PF02616 Segregation and condensation protein ScpA J157_02481 PF04079 Segregation and condensation complex subunit ScpB J157_02482 PF00849 RNA pseudouridylate synthase J157_02482 PF01479 S4 domain J157_02485 PF00795 Carbon-nitrogen hydrolase J157_02486 PF00155 Aminotransferase class I and II J157_02487 PF00005 ABC transporter J157_02488 PF03379 CcmB protein J157_02489 PF01578 Cytochrome C assembly protein J157_02491 PF03100 CcmE J157_02492 PF01578 Cytochrome C assembly protein J157_02492 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J157_02493 PF08534 Redoxin J157_02494 PF03918 Cytochrome C biogenesis protein J157_02496 PF00561 alpha/beta hydrolase fold J157_02497 PF00313 'Cold-shock' DNA-binding domain J157_02498 PF00664 ABC transporter transmembrane region J157_02498 PF00005 ABC transporter J157_02499 PF00664 ABC transporter transmembrane region J157_02499 PF00005 ABC transporter J157_02500 PF01654 Cytochrome bd terminal oxidase subunit I J157_02501 PF02322 Cytochrome bd terminal oxidase subunit II J157_02505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J157_02505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J157_02506 PF00171 Aldehyde dehydrogenase family J157_02507 PF00696 Amino acid kinase family J157_02507 PF01472 PUA domain J157_02509 PF00206 Lyase J157_02510 PF01118 Semialdehyde dehydrogenase, NAD binding domain J157_02512 PF00696 Amino acid kinase family J157_02512 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J157_02515 PF00764 Arginosuccinate synthase J157_02516 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J157_02516 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J157_02518 PF09190 DALR domain J157_02518 PF01406 tRNA synthetases class I (C) catalytic domain J157_02519 PF02657 Fe-S metabolism associated domain J157_02521 PF01258 Prokaryotic dksA/traR C4-type zinc finger J157_02522 PF01809 Putative membrane protein insertion efficiency factor J157_02523 PF01979 Amidohydrolase family J157_02524 PF01551 Peptidase family M23 J157_02524 PF08460 Bacterial SH3 domain J157_02527 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J157_02528 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J157_02530 PF00753 Metallo-beta-lactamase superfamily J157_02534 PF01527 Transposase J157_02537 PF00295 Glycosyl hydrolases family 28 J157_02539 PF13419 Haloacid dehalogenase-like hydrolase J157_02541 PF01979 Amidohydrolase family J157_02543 PF08207 Elongation factor P (EF-P) KOW-like domain J157_02543 PF01132 Elongation factor P (EF-P) OB domain J157_02543 PF09285 Elongation factor P, C-terminal J157_02544 PF04055 Radical SAM superfamily J157_02545 PF00990 Diguanylate cyclase, GGDEF domain J157_02545 PF03707 Bacterial signalling protein N terminal repeat J157_02545 PF13188 PAS domain J157_02545 PF00563 EAL domain J157_02547 PF00588 SpoU rRNA Methylase family J157_02548 PF00459 Inositol monophosphatase family J157_02549 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J157_02549 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J157_02550 PF00545 ribonuclease J157_02553 PF00271 Helicase conserved C-terminal domain J157_02553 PF00270 DEAD/DEAH box helicase J157_02553 PF03880 DbpA RNA binding domain J157_02554 PF00156 Phosphoribosyl transferase domain J157_02555 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J157_02556 PF00135 Carboxylesterase family J157_02557 PF02798 Glutathione S-transferase, N-terminal domain J157_02557 PF14497 Glutathione S-transferase, C-terminal domain J157_02558 PF00313 'Cold-shock' DNA-binding domain J157_02559 PF07152 YaeQ protein J157_02561 PF00072 Response regulator receiver domain J157_02561 PF00990 Diguanylate cyclase, GGDEF domain J157_02561 PF00563 EAL domain J157_02562 PF01435 Peptidase family M48 J157_02563 PF00749 tRNA synthetases class I (E and Q), catalytic domain J157_02564 PF00106 short chain dehydrogenase J157_02565 PF05233 PHB accumulation regulatory domain J157_02565 PF07879 PHB/PHA accumulation regulator DNA-binding domain J157_02568 PF01119 DNA mismatch repair protein, C-terminal domain J157_02568 PF08676 MutL C terminal dimerisation domain J157_02569 PF11741 AMIN domain J157_02569 PF01520 N-acetylmuramoyl-L-alanine amidase J157_02570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J157_02571 PF01256 Carbohydrate kinase J157_02571 PF03853 YjeF-related protein N-terminus J157_02572 PF08331 Domain of unknown function (DUF1730) J157_02573 PF13742 OB-fold nucleic acid binding domain J157_02573 PF02601 Exonuclease VII, large subunit J157_02575 PF03781 Sulfatase-modifying factor enzyme 1 J157_02576 PF01612 3'-5' exonuclease J157_02576 PF00570 HRDC domain J157_02578 PF04679 ATP dependent DNA ligase C terminal region J157_02578 PF01068 ATP dependent DNA ligase domain J157_02578 PF13298 DNA polymerase Ligase (LigD) J157_02582 PF00589 Phage integrase family J157_02586 PF05598 Transposase domain (DUF772) J157_02588 PF01527 Transposase J157_02592 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J157_02592 PF00171 Aldehyde dehydrogenase family J157_02592 PF01619 Proline dehydrogenase J157_02592 PF14850 DNA-binding domain of Proline dehydrogenase J157_02594 PF01527 Transposase J157_02596 PF00665 Integrase core domain J157_02596 PF13276 HTH-like domain J157_02596 PF13333 Integrase core domain J157_02598 PF02796 Helix-turn-helix domain of resolvase J157_02598 PF00239 Resolvase, N terminal domain J157_02601 PF02384 N-6 DNA Methylase J157_02602 PF09572 XamI restriction endonuclease J157_02614 PF01584 CheW-like domain J157_02615 PF00672 HAMP domain J157_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_02615 PF12729 Four helix bundle sensory module for signal transduction J157_02616 PF02245 Methylpurine-DNA glycosylase (MPG) J157_02617 PF08494 DEAD/H associated J157_02617 PF00270 DEAD/DEAH box helicase J157_02617 PF00271 Helicase conserved C-terminal domain J157_02620 PF04386 Stringent starvation protein B J157_02621 PF00043 Glutathione S-transferase, C-terminal domain J157_02621 PF02798 Glutathione S-transferase, N-terminal domain J157_02622 PF02167 Cytochrome C1 family J157_02623 PF00033 Cytochrome b/b6/petB J157_02623 PF00032 Cytochrome b(C-terminal)/b6/petD J157_02624 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J157_02624 PF00355 Rieske [2Fe-2S] domain J157_02625 PF01464 Transglycosylase SLT domain J157_02628 PF04055 Radical SAM superfamily J157_02628 PF01938 TRAM domain J157_02628 PF00919 Uncharacterized protein family UPF0004 J157_02629 PF02562 PhoH-like protein J157_02631 PF02130 Uncharacterized protein family UPF0054 J157_02633 PF03471 Transporter associated domain J157_02633 PF00571 CBS domain J157_02636 PF00171 Aldehyde dehydrogenase family J157_02637 PF00528 Binding-protein-dependent transport system inner membrane component J157_02638 PF00528 Binding-protein-dependent transport system inner membrane component J157_02639 PF00005 ABC transporter J157_02639 PF08402 TOBE domain J157_02640 PF02321 Outer membrane efflux protein J157_02641 PF07690 Major Facilitator Superfamily J157_02642 PF13533 Biotin-lipoyl like J157_02643 PF13416 Bacterial extracellular solute-binding protein J157_02644 PF00202 Aminotransferase class-III J157_02645 PF00120 Glutamine synthetase, catalytic domain J157_02646 PF07722 Peptidase C26 J157_02647 PF00120 Glutamine synthetase, catalytic domain J157_02648 PF01266 FAD dependent oxidoreductase J157_02649 PF00072 Response regulator receiver domain J157_02649 PF00990 Diguanylate cyclase, GGDEF domain J157_02650 PF01814 Hemerythrin HHE cation binding domain J157_02651 PF00083 Sugar (and other) transporter J157_02651 PF07690 Major Facilitator Superfamily J157_02653 PF00384 Molybdopterin oxidoreductase J157_02654 PF02634 FdhD/NarQ family J157_02655 PF07690 Major Facilitator Superfamily J157_02656 PF00202 Aminotransferase class-III J157_02658 PF04286 Protein of unknown function (DUF445) J157_02659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02659 PF00512 His Kinase A (phospho-acceptor) domain J157_02659 PF00672 HAMP domain J157_02659 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J157_02659 PF00072 Response regulator receiver domain J157_02659 PF01627 Hpt domain J157_02660 PF00072 Response regulator receiver domain J157_02661 PF07690 Major Facilitator Superfamily J157_02662 PF05088 Bacterial NAD-glutamate dehydrogenase J157_02664 PF00529 HlyD membrane-fusion protein of T1SS J157_02664 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_02665 PF00873 AcrB/AcrD/AcrF family J157_02666 PF00356 Bacterial regulatory proteins, lacI family J157_02667 PF00381 PTS HPr component phosphorylation site J157_02667 PF02896 PEP-utilising enzyme, TIM barrel domain J157_02667 PF00391 PEP-utilising enzyme, mobile domain J157_02667 PF05524 PEP-utilising enzyme, N-terminal J157_02667 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J157_02668 PF00294 pfkB family carbohydrate kinase J157_02669 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J157_02677 PF07549 SecD/SecF GG Motif J157_02677 PF02355 Protein export membrane protein J157_02678 PF02355 Protein export membrane protein J157_02678 PF13721 SecD export protein N-terminal TM region J157_02678 PF07549 SecD/SecF GG Motif J157_02679 PF02699 Preprotein translocase subunit J157_02680 PF01702 Queuine tRNA-ribosyltransferase J157_02681 PF02547 Queuosine biosynthesis protein J157_02690 PF02927 Cellulase N-terminal ig-like domain J157_02690 PF00759 Glycosyl hydrolase family 9 J157_02692 PF00037 4Fe-4S binding domain J157_02695 PF01467 Cytidylyltransferase-like J157_02697 PF00183 Hsp90 protein J157_02697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02701 PF07715 TonB-dependent Receptor Plug Domain J157_02701 PF00593 TonB dependent receptor J157_02703 PF04616 Glycosyl hydrolases family 43 J157_02704 PF07532 Bacterial Ig-like domain (group 4) J157_02705 PF00593 TonB dependent receptor J157_02705 PF07715 TonB-dependent Receptor Plug Domain J157_02707 PF09286 Pro-kumamolisin, activation domain J157_02707 PF00082 Subtilase family J157_02713 PF13520 Amino acid permease J157_02716 PF01321 Creatinase/Prolidase N-terminal domain J157_02716 PF00557 Metallopeptidase family M24 J157_02717 PF00171 Aldehyde dehydrogenase family J157_02718 PF00701 Dihydrodipicolinate synthetase family J157_02719 PF04324 BFD-like [2Fe-2S] binding domain J157_02719 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_02721 PF01266 FAD dependent oxidoreductase J157_02722 PF05544 Proline racemase J157_02724 PF00448 SRP54-type protein, GTPase domain J157_02724 PF02881 SRP54-type protein, helical bundle domain J157_02725 PF14815 NUDIX domain J157_02725 PF00730 HhH-GPD superfamily base excision DNA repair protein J157_02725 PF00633 Helix-hairpin-helix motif J157_02725 PF10576 Iron-sulfur binding domain of endonuclease III J157_02726 PF04362 Bacterial Fe(2+) trafficking J157_02727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02727 PF00072 Response regulator receiver domain J157_02727 PF13426 PAS domain J157_02733 PF08212 Lipocalin-like domain J157_02735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_02735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_02735 PF12806 Acetyl-CoA dehydrogenase C-terminal like J157_02735 PF02770 Acyl-CoA dehydrogenase, middle domain J157_02737 PF02780 Transketolase, C-terminal domain J157_02737 PF02779 Transketolase, pyrimidine binding domain J157_02737 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J157_02741 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J157_02742 PF16123 Hydroxyacylglutathione hydrolase C-terminus J157_02742 PF00753 Metallo-beta-lactamase superfamily J157_02743 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J157_02743 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J157_02746 PF03808 Glycosyl transferase WecB/TagA/CpsF family J157_02749 PF14667 Polysaccharide biosynthesis C-terminal domain J157_02751 PF13439 Glycosyltransferase Family 4 J157_02751 PF00534 Glycosyl transferases group 1 J157_02755 PF02397 Bacterial sugar transferase J157_02759 PF13411 MerR HTH family regulatory protein J157_02760 PF00216 Bacterial DNA-binding protein J157_02761 PF03147 Ferredoxin-fold anticodon binding domain J157_02761 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J157_02761 PF01588 Putative tRNA binding domain J157_02761 PF03483 B3/4 domain J157_02761 PF03484 tRNA synthetase B5 domain J157_02762 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J157_02762 PF01409 tRNA synthetases class II core domain (F) J157_02763 PF00453 Ribosomal protein L20 J157_02764 PF01632 Ribosomal protein L35 J157_02766 PF00707 Translation initiation factor IF-3, C-terminal domain J157_02766 PF05198 Translation initiation factor IF-3, N-terminal domain J157_02767 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J157_02767 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J157_02767 PF03129 Anticodon binding domain J157_02767 PF02824 TGS domain J157_02768 PF00356 Bacterial regulatory proteins, lacI family J157_02769 PF00128 Alpha amylase, catalytic domain J157_02769 PF00686 Starch binding domain J157_02770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J157_02772 PF10566 Glycoside hydrolase 97 J157_02772 PF14508 Glycosyl-hydrolase 97 N-terminal J157_02772 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J157_02776 PF00128 Alpha amylase, catalytic domain J157_02778 PF01527 Transposase J157_02787 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J157_02788 PF05101 Type IV secretory pathway, VirB3-like protein J157_02790 PF01464 Transglycosylase SLT domain J157_02791 PF00437 Type II/IV secretion system protein J157_02792 PF03743 Bacterial conjugation TrbI-like protein J157_02796 PF02534 Type IV secretory system Conjugative DNA transfer J157_02799 PF04851 Type III restriction enzyme, res subunit J157_02799 PF17757 UvrB interaction domain J157_02799 PF12344 Ultra-violet resistance protein B J157_02799 PF02151 UvrB/uvrC motif J157_02799 PF00271 Helicase conserved C-terminal domain J157_02807 PF01527 Transposase J157_02808 PF13333 Integrase core domain J157_02808 PF00665 Integrase core domain J157_02808 PF13276 HTH-like domain J157_02814 PF01555 DNA methylase J157_02824 PF00182 Chitinase class I J157_02834 PF13333 Integrase core domain J157_02834 PF00665 Integrase core domain J157_02834 PF13276 HTH-like domain J157_02835 PF01527 Transposase J157_02836 PF07963 Prokaryotic N-terminal methylation motif J157_02836 PF00114 Pilin (bacterial filament) J157_02837 PF05567 Neisseria PilC beta-propeller domain J157_02840 PF06580 Histidine kinase J157_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02840 PF07694 5TMR of 5TMR-LYT J157_02841 PF03641 Possible lysine decarboxylase J157_02841 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J157_02841 PF11892 Domain of unknown function (DUF3412) J157_02842 PF00593 TonB dependent receptor J157_02843 PF01914 MarC family integral membrane protein J157_02845 PF00462 Glutaredoxin J157_02846 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J157_02846 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J157_02847 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J157_02847 PF02222 ATP-grasp domain J157_02848 PF00731 AIR carboxylase J157_02850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J157_02850 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J157_02852 PF01138 3' exoribonuclease family, domain 1 J157_02852 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J157_02852 PF00013 KH domain J157_02852 PF00575 S1 RNA binding domain J157_02852 PF03725 3' exoribonuclease family, domain 2 J157_02853 PF00312 Ribosomal protein S15 J157_02854 PF09157 Pseudouridine synthase II TruB, C-terminal J157_02854 PF16198 tRNA pseudouridylate synthase B C-terminal domain J157_02854 PF01509 TruB family pseudouridylate synthase (N terminal domain) J157_02855 PF02033 Ribosome-binding factor A J157_02856 PF00009 Elongation factor Tu GTP binding domain J157_02856 PF11987 Translation-initiation factor 2 J157_02856 PF08364 Bacterial translation initiation factor IF-2 associated region J157_02856 PF04760 Translation initiation factor IF-2, N-terminal region J157_02857 PF00575 S1 RNA binding domain J157_02857 PF13184 NusA-like KH domain J157_02857 PF08529 NusA N-terminal domain J157_02858 PF17384 RimP C-terminal SH3 domain J157_02858 PF02576 RimP N-terminal domain J157_02860 PF00361 Proton-conducting membrane transporter J157_02861 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J157_02861 PF00361 Proton-conducting membrane transporter J157_02862 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J157_02862 PF00361 Proton-conducting membrane transporter J157_02863 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J157_02864 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J157_02865 PF12838 4Fe-4S dicluster domain J157_02866 PF00146 NADH dehydrogenase J157_02867 PF00384 Molybdopterin oxidoreductase J157_02867 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J157_02867 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J157_02868 PF10531 SLBB domain J157_02868 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J157_02868 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J157_02870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J157_02871 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J157_02872 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J157_02873 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J157_02876 PF00121 Triosephosphate isomerase J157_02877 PF00106 short chain dehydrogenase J157_02880 PF00563 EAL domain J157_02880 PF00990 Diguanylate cyclase, GGDEF domain J157_02880 PF03707 Bacterial signalling protein N terminal repeat J157_02883 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J157_02883 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J157_02883 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J157_02883 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J157_02884 PF17848 Acetyl-coA carboxylase zinc finger domain J157_02884 PF01039 Carboxyl transferase domain J157_02885 PF00290 Tryptophan synthase alpha chain J157_02887 PF00291 Pyridoxal-phosphate dependent enzyme J157_02888 PF03466 LysR substrate binding domain J157_02888 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_02889 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J157_02890 PF01416 tRNA pseudouridine synthase J157_02894 PF01118 Semialdehyde dehydrogenase, NAD binding domain J157_02894 PF02774 Semialdehyde dehydrogenase, dimerisation domain J157_02895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J157_02895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J157_02896 PF01264 Chorismate synthase J157_02897 PF05175 Methyltransferase small domain J157_02898 PF02630 SCO1/SenC J157_02899 PF02666 Phosphatidylserine decarboxylase J157_02901 PF05872 Bacterial protein of unknown function (DUF853) J157_02902 PF00293 NUDIX domain J157_02905 PF03449 Transcription elongation factor, N-terminal J157_02905 PF01272 Transcription elongation factor, GreA/GreB, C-term J157_02906 PF04055 Radical SAM superfamily J157_02906 PF00919 Uncharacterized protein family UPF0004 J157_02906 PF18693 TRAM domain J157_02907 PF01738 Dienelactone hydrolase family J157_02911 PF00692 dUTPase J157_02912 PF10609 NUBPL iron-transfer P-loop NTPase J157_02913 PF00593 TonB dependent receptor J157_02913 PF07715 TonB-dependent Receptor Plug Domain J157_02916 PF05649 Peptidase family M13 J157_02916 PF01431 Peptidase family M13 J157_02917 PF01431 Peptidase family M13 J157_02917 PF05649 Peptidase family M13 J157_02920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J157_02921 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J157_02921 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_02922 PF01266 FAD dependent oxidoreductase J157_02923 PF04235 Protein of unknown function (DUF418) J157_02924 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J157_02925 PF00877 NlpC/P60 family J157_02926 PF00877 NlpC/P60 family J157_02929 PF00375 Sodium:dicarboxylate symporter family J157_02930 PF00245 Alkaline phosphatase J157_02931 PF11734 TilS substrate C-terminal domain J157_02931 PF01171 PP-loop family J157_02931 PF09179 TilS substrate binding domain J157_02932 PF02609 Exonuclease VII small subunit J157_02933 PF00348 Polyprenyl synthetase J157_02934 PF14521 Lysine-specific metallo-endopeptidase J157_02936 PF01523 Putative modulator of DNA gyrase J157_02937 PF04751 Protein of unknown function (DUF615) J157_02938 PF01523 Putative modulator of DNA gyrase J157_02940 PF13502 AsmA-like C-terminal region J157_02940 PF13116 Protein of unknown function J157_02941 PF10150 Ribonuclease E/G family J157_02941 PF00575 S1 RNA binding domain J157_02942 PF02545 Maf-like protein J157_02943 PF04402 Protein of unknown function (DUF541) J157_02946 PF02590 Predicted SPOUT methyltransferase J157_02949 PF01467 Cytidylyltransferase-like J157_02952 PF08264 Anticodon-binding domain of tRNA J157_02952 PF13603 Leucyl-tRNA synthetase, Domain 2 J157_02952 PF00133 tRNA synthetases class I (I, L, M and V) J157_02954 PF00085 Thioredoxin J157_02959 PF04070 Domain of unknown function (DUF378) J157_02960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J157_02962 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_02962 PF03466 LysR substrate binding domain J157_02967 PF00005 ABC transporter J157_02967 PF00664 ABC transporter transmembrane region J157_02970 PF00873 AcrB/AcrD/AcrF family J157_02973 PF02321 Outer membrane efflux protein J157_02974 PF00486 Transcriptional regulatory protein, C terminal J157_02974 PF00072 Response regulator receiver domain J157_02975 PF00672 HAMP domain J157_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_02975 PF00512 His Kinase A (phospho-acceptor) domain J157_02976 PF00999 Sodium/hydrogen exchanger family J157_02977 PF00144 Beta-lactamase J157_02978 PF03737 Aldolase/RraA J157_02981 PF00072 Response regulator receiver domain J157_02981 PF00990 Diguanylate cyclase, GGDEF domain J157_02982 PF01479 S4 domain J157_02982 PF00849 RNA pseudouridylate synthase J157_02983 PF00990 Diguanylate cyclase, GGDEF domain J157_02983 PF00563 EAL domain J157_02983 PF08448 PAS fold J157_02984 PF00270 DEAD/DEAH box helicase J157_02984 PF03880 DbpA RNA binding domain J157_02984 PF00271 Helicase conserved C-terminal domain J157_02994 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J157_02994 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J157_02996 PF00654 Voltage gated chloride channel J157_02997 PF08240 Alcohol dehydrogenase GroES-like domain J157_02997 PF00107 Zinc-binding dehydrogenase J157_03000 PF00593 TonB dependent receptor J157_03000 PF07715 TonB-dependent Receptor Plug Domain J157_03002 PF01483 Proprotein convertase P-domain J157_03002 PF00082 Subtilase family J157_03005 PF01483 Proprotein convertase P-domain J157_03005 PF00082 Subtilase family J157_03007 PF00248 Aldo/keto reductase family J157_03008 PF07690 Major Facilitator Superfamily J157_03009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03009 PF03466 LysR substrate binding domain J157_03011 PF06719 AraC-type transcriptional regulator N-terminus J157_03011 PF12833 Helix-turn-helix domain J157_03013 PF16859 Tetracyclin repressor-like, C-terminal domain J157_03013 PF00440 Bacterial regulatory proteins, tetR family J157_03014 PF02321 Outer membrane efflux protein J157_03015 PF00873 AcrB/AcrD/AcrF family J157_03016 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_03016 PF00529 HlyD membrane-fusion protein of T1SS J157_03018 PF01475 Ferric uptake regulator family J157_03019 PF00749 tRNA synthetases class I (E and Q), catalytic domain J157_03024 PF06123 Inner membrane protein CreD J157_03026 PF00512 His Kinase A (phospho-acceptor) domain J157_03026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03026 PF00672 HAMP domain J157_03027 PF00072 Response regulator receiver domain J157_03027 PF00486 Transcriptional regulatory protein, C terminal J157_03028 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J157_03030 PF17757 UvrB interaction domain J157_03030 PF00270 DEAD/DEAH box helicase J157_03030 PF03461 TRCF domain J157_03030 PF02559 CarD-like/TRCF domain J157_03030 PF00271 Helicase conserved C-terminal domain J157_03037 PF09078 CheY binding J157_03037 PF02895 Signal transducing histidine kinase, homodimeric domain J157_03037 PF01584 CheW-like domain J157_03037 PF01627 Hpt domain J157_03037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03038 PF00672 HAMP domain J157_03038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03038 PF02203 Tar ligand binding domain homologue J157_03039 PF01584 CheW-like domain J157_03040 PF00990 Diguanylate cyclase, GGDEF domain J157_03040 PF00563 EAL domain J157_03040 PF13426 PAS domain J157_03041 PF03705 CheR methyltransferase, all-alpha domain J157_03041 PF01739 CheR methyltransferase, SAM binding domain J157_03042 PF00072 Response regulator receiver domain J157_03042 PF01339 CheB methylesterase J157_03043 PF13091 PLD-like domain J157_03044 PF01431 Peptidase family M13 J157_03044 PF05649 Peptidase family M13 J157_03046 PF00300 Histidine phosphatase superfamily (branch 1) J157_03047 PF04493 Endonuclease V J157_03049 PF05726 Pirin C-terminal cupin domain J157_03049 PF02678 Pirin J157_03052 PF02678 Pirin J157_03052 PF05726 Pirin C-terminal cupin domain J157_03053 PF02554 Carbon starvation protein CstA J157_03053 PF13722 5TM C-terminal transporter carbon starvation CstA J157_03054 PF04328 Selenoprotein, putative J157_03063 PF01527 Transposase J157_03065 PF02625 XdhC and CoxI family J157_03065 PF13478 XdhC Rossmann domain J157_03066 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J157_03066 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J157_03067 PF03450 CO dehydrogenase flavoprotein C-terminal domain J157_03067 PF00941 FAD binding domain in molybdopterin dehydrogenase J157_03068 PF00111 2Fe-2S iron-sulfur cluster binding domain J157_03068 PF10518 TAT (twin-arginine translocation) pathway signal sequence J157_03068 PF01799 [2Fe-2S] binding domain J157_03069 PF09277 Erythronolide synthase, docking J157_03069 PF08659 KR domain J157_03069 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_03069 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_03069 PF00550 Phosphopantetheine attachment site J157_03069 PF14765 Polyketide synthase dehydratase J157_03069 PF16197 Ketoacyl-synthetase C-terminal extension J157_03069 PF00698 Acyl transferase domain J157_03069 PF08990 Erythronolide synthase docking J157_03069 PF08240 Alcohol dehydrogenase GroES-like domain J157_03070 PF00990 Diguanylate cyclase, GGDEF domain J157_03070 PF00360 Phytochrome region J157_03070 PF01590 GAF domain J157_03070 PF00563 EAL domain J157_03071 PF00436 Single-strand binding protein family J157_03072 PF00348 Polyprenyl synthetase J157_03074 PF02875 Mur ligase family, glutamate ligase domain J157_03074 PF08245 Mur ligase middle domain J157_03077 PF01842 ACT domain J157_03077 PF00696 Amino acid kinase family J157_03078 PF02567 Phenazine biosynthesis-like protein J157_03079 PF02567 Phenazine biosynthesis-like protein J157_03081 PF02566 OsmC-like protein J157_03082 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J157_03082 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J157_03083 PF03652 Holliday junction resolvase J157_03084 PF02622 Uncharacterized ACR, COG1678 J157_03085 PF13302 Acetyltransferase (GNAT) domain J157_03085 PF13673 Acetyltransferase (GNAT) domain J157_03085 PF03352 Methyladenine glycosylase J157_03085 PF00958 GMP synthase C terminal domain J157_03085 PF00117 Glutamine amidotransferase class-I J157_03088 PF03211 Pectate lyase J157_03089 PF00437 Type II/IV secretion system protein J157_03090 PF00437 Type II/IV secretion system protein J157_03091 PF01168 Alanine racemase, N-terminal domain J157_03092 PF03807 NADP oxidoreductase coenzyme F420-dependent J157_03092 PF14748 Pyrroline-5-carboxylate reductase dimerisation J157_03094 PF01551 Peptidase family M23 J157_03098 PF01965 DJ-1/PfpI family J157_03100 PF02082 Transcriptional regulator J157_03101 PF01458 Uncharacterized protein family (UPF0051) J157_03102 PF00005 ABC transporter J157_03103 PF01458 Uncharacterized protein family (UPF0051) J157_03104 PF00266 Aminotransferase class-V J157_03106 PF00355 Rieske [2Fe-2S] domain J157_03107 PF00593 TonB dependent receptor J157_03107 PF07715 TonB-dependent Receptor Plug Domain J157_03108 PF18331 PKHD-type hydroxylase C-terminal domain J157_03108 PF13640 2OG-Fe(II) oxygenase superfamily J157_03113 PF02424 ApbE family J157_03114 PF00175 Oxidoreductase NAD-binding domain J157_03114 PF00258 Flavodoxin J157_03114 PF00667 FAD binding domain J157_03118 PF07687 Peptidase dimerisation domain J157_03118 PF01546 Peptidase family M20/M25/M40 J157_03120 PF01636 Phosphotransferase enzyme family J157_03121 PF00483 Nucleotidyl transferase J157_03122 PF00308 Bacterial dnaA protein J157_03123 PF01594 AI-2E family transporter J157_03125 PF02769 AIR synthase related protein, C-terminal domain J157_03125 PF00586 AIR synthase related protein, N-terminal domain J157_03127 PF00551 Formyl transferase J157_03131 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J157_03132 PF01722 BolA-like protein J157_03133 PF01380 SIS domain J157_03133 PF00571 CBS domain J157_03136 PF03968 OstA-like protein J157_03137 PF00005 ABC transporter J157_03138 PF04552 Sigma-54, DNA binding domain J157_03138 PF04963 Sigma-54 factor, core binding domain J157_03138 PF00309 Sigma-54 factor, Activator interacting domain (AID) J157_03139 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J157_03140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J157_03141 PF07475 HPr Serine kinase C-terminal domain J157_03141 PF02603 HPr Serine kinase N terminus J157_03142 PF03668 P-loop ATPase protein family J157_03144 PF00381 PTS HPr component phosphorylation site J157_03145 PF02896 PEP-utilising enzyme, TIM barrel domain J157_03145 PF00391 PEP-utilising enzyme, mobile domain J157_03145 PF05524 PEP-utilising enzyme, N-terminal J157_03146 PF03448 MgtE intracellular N domain J157_03146 PF01769 Divalent cation transporter J157_03146 PF00571 CBS domain J157_03147 PF00756 Putative esterase J157_03148 PF02322 Cytochrome bd terminal oxidase subunit II J157_03149 PF01654 Cytochrome bd terminal oxidase subunit I J157_03151 PF00324 Amino acid permease J157_03152 PF00544 Pectate lyase J157_03153 PF00561 alpha/beta hydrolase fold J157_03154 PF00196 Bacterial regulatory proteins, luxR family J157_03155 PF00324 Amino acid permease J157_03160 PF12706 Beta-lactamase superfamily domain J157_03161 PF04820 Tryptophan halogenase J157_03166 PF00376 MerR family regulatory protein J157_03166 PF09278 MerR, DNA binding J157_03167 PF07690 Major Facilitator Superfamily J157_03169 PF03738 Glutathionylspermidine synthase preATP-grasp J157_03174 PF04012 PspA/IM30 family J157_03176 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J157_03176 PF01243 Pyridoxamine 5'-phosphate oxidase J157_03177 PF01202 Shikimate kinase J157_03178 PF01761 3-dehydroquinate synthase J157_03180 PF01208 Uroporphyrinogen decarboxylase (URO-D) J157_03193 PF00158 Sigma-54 interaction domain J157_03193 PF02954 Bacterial regulatory protein, Fis family J157_03193 PF01590 GAF domain J157_03194 PF07690 Major Facilitator Superfamily J157_03195 PF00512 His Kinase A (phospho-acceptor) domain J157_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03195 PF00672 HAMP domain J157_03195 PF17149 Periplasmic sensor domain found in signal transduction proteins J157_03195 PF00072 Response regulator receiver domain J157_03195 PF01627 Hpt domain J157_03196 PF00672 HAMP domain J157_03196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03196 PF00512 His Kinase A (phospho-acceptor) domain J157_03196 PF01627 Hpt domain J157_03196 PF00072 Response regulator receiver domain J157_03196 PF17149 Periplasmic sensor domain found in signal transduction proteins J157_03198 PF00072 Response regulator receiver domain J157_03198 PF01627 Hpt domain J157_03198 PF00512 His Kinase A (phospho-acceptor) domain J157_03198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03199 PF04264 YceI-like domain J157_03203 PF03315 Serine dehydratase beta chain J157_03203 PF03313 Serine dehydratase alpha chain J157_03204 PF12697 Alpha/beta hydrolase family J157_03205 PF00742 Homoserine dehydrogenase J157_03205 PF00696 Amino acid kinase family J157_03205 PF03447 Homoserine dehydrogenase, NAD binding domain J157_03206 PF01053 Cys/Met metabolism PLP-dependent enzyme J157_03207 PF00561 alpha/beta hydrolase fold J157_03209 PF08525 Opacity-associated protein A N-terminal motif J157_03209 PF01476 LysM domain J157_03209 PF01551 Peptidase family M23 J157_03210 PF16658 Class II release factor RF3, C-terminal domain J157_03210 PF00009 Elongation factor Tu GTP binding domain J157_03211 PF03006 Haemolysin-III related J157_03212 PF05170 AsmA family J157_03213 PF00478 IMP dehydrogenase / GMP reductase domain J157_03213 PF00571 CBS domain J157_03214 PF00535 Glycosyl transferase family 2 J157_03215 PF00912 Transglycosylase J157_03216 PF01430 Hsp33 protein J157_03218 PF00593 TonB dependent receptor J157_03218 PF07715 TonB-dependent Receptor Plug Domain J157_03220 PF00440 Bacterial regulatory proteins, tetR family J157_03221 PF00561 alpha/beta hydrolase fold J157_03222 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J157_03222 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J157_03222 PF09317 Domain of unknown function (DUF1974) J157_03227 PF01597 Glycine cleavage H-protein J157_03228 PF08669 Glycine cleavage T-protein C-terminal barrel domain J157_03228 PF01571 Aminomethyltransferase folate-binding domain J157_03230 PF01145 SPFH domain / Band 7 family J157_03230 PF16200 C-terminal region of band_7 J157_03231 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J157_03232 PF03819 MazG nucleotide pyrophosphohydrolase domain J157_03233 PF00459 Inositol monophosphatase family J157_03234 PF00293 NUDIX domain J157_03235 PF00202 Aminotransferase class-III J157_03236 PF04452 RNA methyltransferase J157_03237 PF02685 Glucokinase J157_03240 PF00704 Glycosyl hydrolases family 18 J157_03240 PF01476 LysM domain J157_03241 PF07691 PA14 domain J157_03241 PF02838 Glycosyl hydrolase family 20, domain 2 J157_03241 PF00728 Glycosyl hydrolase family 20, catalytic domain J157_03243 PF14310 Fibronectin type III-like domain J157_03243 PF07691 PA14 domain J157_03243 PF01915 Glycosyl hydrolase family 3 C-terminal domain J157_03243 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_03245 PF01301 Glycosyl hydrolases family 35 J157_03246 PF13520 Amino acid permease J157_03248 PF11975 Family 4 glycosyl hydrolase C-terminal domain J157_03248 PF02056 Family 4 glycosyl hydrolase J157_03250 PF07971 Glycosyl hydrolase family 92 J157_03250 PF17678 Glycosyl hydrolase family 92 N-terminal domain J157_03251 PF01301 Glycosyl hydrolases family 35 J157_03257 PF03932 CutC family J157_03258 PF01112 Asparaginase J157_03259 PF13302 Acetyltransferase (GNAT) domain J157_03262 PF00072 Response regulator receiver domain J157_03262 PF01584 CheW-like domain J157_03262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03262 PF01627 Hpt domain J157_03263 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03263 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J157_03265 PF00072 Response regulator receiver domain J157_03266 PF00072 Response regulator receiver domain J157_03267 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J157_03267 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J157_03269 PF03747 ADP-ribosylglycohydrolase J157_03270 PF00814 Glycoprotease family J157_03271 PF04851 Type III restriction enzyme, res subunit J157_03271 PF13307 Helicase C-terminal domain J157_03273 PF00912 Transglycosylase J157_03273 PF14814 Bifunctional transglycosylase second domain J157_03273 PF00905 Penicillin binding protein transpeptidase domain J157_03274 PF00535 Glycosyl transferase family 2 J157_03276 PF13291 ACT domain J157_03276 PF04607 Region found in RelA / SpoT proteins J157_03276 PF02824 TGS domain J157_03277 PF12706 Beta-lactamase superfamily domain J157_03278 PF03070 TENA/THI-4/PQQC family J157_03279 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J157_03280 PF04055 Radical SAM superfamily J157_03280 PF13186 Iron-sulfur cluster-binding domain J157_03283 PF02685 Glucokinase J157_03285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J157_03285 PF11898 Domain of unknown function (DUF3418) J157_03285 PF04408 Helicase associated domain (HA2) J157_03285 PF00271 Helicase conserved C-terminal domain J157_03285 PF00270 DEAD/DEAH box helicase J157_03286 PF00210 Ferritin-like domain J157_03287 PF00570 HRDC domain J157_03287 PF16124 RecQ zinc-binding J157_03287 PF09382 RQC domain J157_03287 PF00271 Helicase conserved C-terminal domain J157_03287 PF00270 DEAD/DEAH box helicase J157_03294 PF02203 Tar ligand binding domain homologue J157_03294 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03294 PF00672 HAMP domain J157_03298 PF07536 HWE histidine kinase J157_03298 PF13581 Histidine kinase-like ATPase domain J157_03298 PF13426 PAS domain J157_03299 PF06508 Queuosine biosynthesis protein QueC J157_03301 PF04055 Radical SAM superfamily J157_03303 PF00691 OmpA family J157_03304 PF07676 WD40-like Beta Propeller Repeat J157_03304 PF04052 TolB amino-terminal domain J157_03306 PF02472 Biopolymer transport protein ExbD/TolR J157_03307 PF01618 MotA/TolQ/ExbB proton channel family J157_03308 PF03061 Thioesterase superfamily J157_03309 PF17864 RuvB AAA lid domain J157_03309 PF05496 Holliday junction DNA helicase RuvB P-loop domain J157_03309 PF05491 RuvB C-terminal winged helix domain J157_03311 PF02705 K+ potassium transporter J157_03312 PF07499 RuvA, C-terminal domain J157_03312 PF01330 RuvA N terminal domain J157_03313 PF02075 Crossover junction endodeoxyribonuclease RuvC J157_03314 PF01709 Transcriptional regulator J157_03317 PF00152 tRNA synthetases class II (D, K and N) J157_03317 PF02938 GAD domain J157_03317 PF01336 OB-fold nucleic acid binding domain J157_03320 PF07690 Major Facilitator Superfamily J157_03323 PF05506 Domain of unknown function (DUF756) J157_03323 PF04185 Phosphoesterase family J157_03326 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03326 PF03466 LysR substrate binding domain J157_03328 PF00005 ABC transporter J157_03328 PF12848 ABC transporter J157_03329 PF07715 TonB-dependent Receptor Plug Domain J157_03329 PF00593 TonB dependent receptor J157_03331 PF07715 TonB-dependent Receptor Plug Domain J157_03331 PF00593 TonB dependent receptor J157_03332 PF00593 TonB dependent receptor J157_03332 PF07715 TonB-dependent Receptor Plug Domain J157_03333 PF00067 Cytochrome P450 J157_03334 PF00999 Sodium/hydrogen exchanger family J157_03334 PF02254 TrkA-N domain J157_03339 PF00593 TonB dependent receptor J157_03339 PF07660 Secretin and TonB N terminus short domain J157_03339 PF07715 TonB-dependent Receptor Plug Domain J157_03341 PF06276 Ferric iron reductase FhuF-like transporter J157_03341 PF04183 IucA / IucC family J157_03342 PF07690 Major Facilitator Superfamily J157_03344 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J157_03344 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J157_03347 PF02654 Cobalamin-5-phosphate synthase J157_03349 PF02277 Phosphoribosyltransferase J157_03350 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J157_03351 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J157_03351 PF07685 CobB/CobQ-like glutamine amidotransferase domain J157_03352 PF00155 Aminotransferase class I and II J157_03354 PF03186 CobD/Cbib protein J157_03354 PF17113 Regulatory signalling modulator protein AmpE J157_03355 PF12557 Cob(I)alamin adenosyltransferase N terminal J157_03355 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J157_03358 PF00593 TonB dependent receptor J157_03358 PF07715 TonB-dependent Receptor Plug Domain J157_03360 PF10431 C-terminal, D2-small domain, of ClpB protein J157_03360 PF17871 AAA lid domain J157_03360 PF07724 AAA domain (Cdc48 subfamily) J157_03360 PF02861 Clp amino terminal domain, pathogenicity island component J157_03360 PF00004 ATPase family associated with various cellular activities (AAA) J157_03361 PF00005 ABC transporter J157_03362 PF00528 Binding-protein-dependent transport system inner membrane component J157_03363 PF09084 NMT1/THI5 like J157_03364 PF00248 Aldo/keto reductase family J157_03366 PF07715 TonB-dependent Receptor Plug Domain J157_03366 PF00593 TonB dependent receptor J157_03367 PF01541 GIY-YIG catalytic domain J157_03374 PF07715 TonB-dependent Receptor Plug Domain J157_03374 PF00593 TonB dependent receptor J157_03375 PF02358 Trehalose-phosphatase J157_03376 PF00723 Glycosyl hydrolases family 15 J157_03377 PF00982 Glycosyltransferase family 20 J157_03378 PF01011 PQQ enzyme repeat J157_03379 PF00672 HAMP domain J157_03379 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03379 PF02203 Tar ligand binding domain homologue J157_03380 PF04134 Protein of unknown function, DUF393 J157_03383 PF00849 RNA pseudouridylate synthase J157_03384 PF13525 Outer membrane lipoprotein J157_03386 PF00795 Carbon-nitrogen hydrolase J157_03386 PF02540 NAD synthase J157_03388 PF01527 Transposase J157_03389 PF13276 HTH-like domain J157_03389 PF13333 Integrase core domain J157_03389 PF00665 Integrase core domain J157_03392 PF13406 Transglycosylase SLT domain J157_03393 PF13700 Domain of unknown function (DUF4158) J157_03393 PF01526 Tn3 transposase DDE domain J157_03397 PF01129 NAD:arginine ADP-ribosyltransferase J157_03402 PF02629 CoA binding domain J157_03402 PF00549 CoA-ligase J157_03403 PF08442 ATP-grasp domain J157_03403 PF00549 CoA-ligase J157_03404 PF00512 His Kinase A (phospho-acceptor) domain J157_03404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03405 PF00072 Response regulator receiver domain J157_03405 PF02954 Bacterial regulatory protein, Fis family J157_03405 PF00158 Sigma-54 interaction domain J157_03407 PF00437 Type II/IV secretion system protein J157_03407 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J157_03408 PF00437 Type II/IV secretion system protein J157_03408 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J157_03409 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J157_03409 PF00437 Type II/IV secretion system protein J157_03410 PF00114 Pilin (bacterial filament) J157_03410 PF07963 Prokaryotic N-terminal methylation motif J157_03411 PF00114 Pilin (bacterial filament) J157_03411 PF07963 Prokaryotic N-terminal methylation motif J157_03412 PF00482 Type II secretion system (T2SS), protein F J157_03413 PF06750 Bacterial Peptidase A24 N-terminal domain J157_03413 PF01478 Type IV leader peptidase family J157_03414 PF01121 Dephospho-CoA kinase J157_03417 PF01527 Transposase J157_03418 PF13276 HTH-like domain J157_03418 PF00665 Integrase core domain J157_03418 PF13333 Integrase core domain J157_03419 PF00989 PAS fold J157_03419 PF16736 Single Cache-like J157_03419 PF00512 His Kinase A (phospho-acceptor) domain J157_03419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03420 PF00486 Transcriptional regulatory protein, C terminal J157_03420 PF00072 Response regulator receiver domain J157_03422 PF08443 RimK-like ATP-grasp domain J157_03422 PF18030 RimK PreATP-grasp domain J157_03423 PF00128 Alpha amylase, catalytic domain J157_03423 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J157_03436 PF04002 RadC-like JAB domain J157_03441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03441 PF13426 PAS domain J157_03441 PF00072 Response regulator receiver domain J157_03442 PF13426 PAS domain J157_03442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03442 PF00072 Response regulator receiver domain J157_03448 PF01527 Transposase J157_03457 PF00512 His Kinase A (phospho-acceptor) domain J157_03457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03457 PF00072 Response regulator receiver domain J157_03457 PF08448 PAS fold J157_03457 PF13188 PAS domain J157_03461 PF13676 TIR domain J157_03465 PF03797 Autotransporter beta-domain J157_03465 PF00657 GDSL-like Lipase/Acylhydrolase J157_03467 PF05690 Thiazole biosynthesis protein ThiG J157_03468 PF02390 Putative methyltransferase J157_03469 PF03600 Citrate transporter J157_03469 PF02080 TrkA-C domain J157_03472 PF01557 Fumarylacetoacetate (FAA) hydrolase family J157_03473 PF01741 Large-conductance mechanosensitive channel, MscL J157_03475 PF00356 Bacterial regulatory proteins, lacI family J157_03477 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J157_03477 PF02837 Glycosyl hydrolases family 2, sugar binding domain J157_03477 PF00703 Glycosyl hydrolases family 2 J157_03478 PF14508 Glycosyl-hydrolase 97 N-terminal J157_03478 PF10566 Glycoside hydrolase 97 J157_03478 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J157_03480 PF00135 Carboxylesterase family J157_03481 PF08032 RNA 2'-O ribose methyltransferase substrate binding J157_03481 PF00588 SpoU rRNA Methylase family J157_03483 PF11838 ERAP1-like C-terminal domain J157_03483 PF01433 Peptidase family M1 domain J157_03485 PF00665 Integrase core domain J157_03485 PF13276 HTH-like domain J157_03485 PF13333 Integrase core domain J157_03486 PF01527 Transposase J157_03492 PF00873 AcrB/AcrD/AcrF family J157_03493 PF00529 HlyD membrane-fusion protein of T1SS J157_03493 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_03494 PF00009 Elongation factor Tu GTP binding domain J157_03495 PF01507 Phosphoadenosine phosphosulfate reductase family J157_03496 PF00175 Oxidoreductase NAD-binding domain J157_03496 PF00258 Flavodoxin J157_03496 PF00667 FAD binding domain J157_03497 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J157_03497 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J157_03498 PF01507 Phosphoadenosine phosphosulfate reductase family J157_03502 PF00512 His Kinase A (phospho-acceptor) domain J157_03502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03502 PF00072 Response regulator receiver domain J157_03502 PF01627 Hpt domain J157_03504 PF03466 LysR substrate binding domain J157_03504 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03505 PF14824 Sirohaem biosynthesis protein central J157_03505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J157_03505 PF10414 Sirohaem synthase dimerisation region J157_03506 PF00291 Pyridoxal-phosphate dependent enzyme J157_03508 PF01661 Macro domain J157_03509 PF00274 Fructose-bisphosphate aldolase class-I J157_03510 PF00224 Pyruvate kinase, barrel domain J157_03510 PF02887 Pyruvate kinase, alpha/beta domain J157_03512 PF00162 Phosphoglycerate kinase J157_03517 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J157_03517 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J157_03519 PF03922 OmpW family J157_03520 PF03922 OmpW family J157_03522 PF04273 Putative phosphatase (DUF442) J157_03522 PF00753 Metallo-beta-lactamase superfamily J157_03524 PF00528 Binding-protein-dependent transport system inner membrane component J157_03525 PF00005 ABC transporter J157_03525 PF03459 TOBE domain J157_03532 PF01476 LysM domain J157_03532 PF03734 L,D-transpeptidase catalytic domain J157_03533 PF01551 Peptidase family M23 J157_03533 PF04225 Opacity-associated protein A LysM-like domain J157_03535 PF00593 TonB dependent receptor J157_03535 PF07715 TonB-dependent Receptor Plug Domain J157_03536 PF12146 Serine aminopeptidase, S33 J157_03537 PF02779 Transketolase, pyrimidine binding domain J157_03537 PF02780 Transketolase, C-terminal domain J157_03537 PF00456 Transketolase, thiamine diphosphate binding domain J157_03538 PF00375 Sodium:dicarboxylate symporter family J157_03540 PF07584 Aerotolerance regulator N-terminal J157_03540 PF00092 von Willebrand factor type A domain J157_03544 PF17863 AAA lid domain J157_03544 PF07726 ATPase family associated with various cellular activities (AAA) J157_03546 PF03958 Bacterial type II/III secretion system short domain J157_03546 PF00263 Bacterial type II and III secretion system protein J157_03546 PF11741 AMIN domain J157_03546 PF07660 Secretin and TonB N terminus short domain J157_03551 PF00912 Transglycosylase J157_03551 PF00905 Penicillin binding protein transpeptidase domain J157_03551 PF17092 Penicillin-binding protein OB-like domain J157_03554 PF00285 Citrate synthase, C-terminal domain J157_03555 PF01197 Ribosomal protein L31 J157_03556 PF01156 Inosine-uridine preferring nucleoside hydrolase J157_03557 PF00271 Helicase conserved C-terminal domain J157_03557 PF17191 RecG wedge domain J157_03557 PF00270 DEAD/DEAH box helicase J157_03558 PF01042 Endoribonuclease L-PSP J157_03559 PF04607 Region found in RelA / SpoT proteins J157_03559 PF02824 TGS domain J157_03559 PF13291 ACT domain J157_03560 PF01192 RNA polymerase Rpb6 J157_03561 PF00625 Guanylate kinase J157_03562 PF08340 Domain of unknown function (DUF1732) J157_03562 PF03755 YicC-like family, N-terminal region J157_03563 PF03725 3' exoribonuclease family, domain 2 J157_03563 PF01138 3' exoribonuclease family, domain 1 J157_03565 PF01725 Ham1 family J157_03566 PF04055 Radical SAM superfamily J157_03566 PF06969 HemN C-terminal domain J157_03569 PF00557 Metallopeptidase family M24 J157_03571 PF05195 Aminopeptidase P, N-terminal domain J157_03571 PF00557 Metallopeptidase family M24 J157_03572 PF03695 Uncharacterised protein family (UPF0149) J157_03574 PF05164 Cell division protein ZapA J157_03576 PF01812 5-formyltetrahydrofolate cyclo-ligase family J157_03578 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J157_03580 PF13369 Transglutaminase-like superfamily J157_03581 PF00301 Rubredoxin J157_03582 PF02581 Thiamine monophosphate synthase J157_03585 PF00202 Aminotransferase class-III J157_03586 PF00196 Bacterial regulatory proteins, luxR family J157_03586 PF17874 MalT-like TPR region J157_03587 PF00127 Copper binding proteins, plastocyanin/azurin family J157_03588 PF00155 Aminotransferase class I and II J157_03590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J157_03590 PF00034 Cytochrome c J157_03591 PF01593 Flavin containing amine oxidoreductase J157_03594 PF00202 Aminotransferase class-III J157_03595 PF00027 Cyclic nucleotide-binding domain J157_03595 PF00520 Ion transport protein J157_03598 PF01569 PAP2 superfamily J157_03599 PF01062 Bestrophin, RFP-TM, chloride channel J157_03601 PF02875 Mur ligase family, glutamate ligase domain J157_03601 PF08245 Mur ligase middle domain J157_03601 PF01225 Mur ligase family, catalytic domain J157_03603 PF00365 Phosphofructokinase J157_03605 PF03030 Inorganic H+ pyrophosphatase J157_03607 PF00719 Inorganic pyrophosphatase J157_03609 PF07715 TonB-dependent Receptor Plug Domain J157_03609 PF00593 TonB dependent receptor J157_03610 PF12833 Helix-turn-helix domain J157_03611 PF18500 CadC C-terminal domain 1 J157_03611 PF00486 Transcriptional regulatory protein, C terminal J157_03612 PF13667 ThiC-associated domain J157_03612 PF01964 Radical SAM ThiC family J157_03614 PF00593 TonB dependent receptor J157_03614 PF07715 TonB-dependent Receptor Plug Domain J157_03615 PF00672 HAMP domain J157_03615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03615 PF02203 Tar ligand binding domain homologue J157_03617 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J157_03617 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J157_03618 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J157_03618 PF00205 Thiamine pyrophosphate enzyme, central domain J157_03618 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J157_03620 PF00291 Pyridoxal-phosphate dependent enzyme J157_03621 PF00682 HMGL-like J157_03621 PF08502 LeuA allosteric (dimerisation) domain J157_03622 PF00180 Isocitrate/isopropylmalate dehydrogenase J157_03623 PF00694 Aconitase C-terminal domain J157_03624 PF00330 Aconitase family (aconitate hydratase) J157_03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03626 PF00990 Diguanylate cyclase, GGDEF domain J157_03626 PF17151 Periplasmic sensor domain J157_03629 PF02321 Outer membrane efflux protein J157_03630 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J157_03631 PF03279 Bacterial lipid A biosynthesis acyltransferase J157_03636 PF01515 Phosphate acetyl/butaryl transferase J157_03636 PF03949 Malic enzyme, NAD binding domain J157_03636 PF00390 Malic enzyme, N-terminal domain J157_03637 PF00375 Sodium:dicarboxylate symporter family J157_03639 PF00512 His Kinase A (phospho-acceptor) domain J157_03639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03639 PF02743 Cache domain J157_03640 PF07690 Major Facilitator Superfamily J157_03642 PF03466 LysR substrate binding domain J157_03642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03643 PF00248 Aldo/keto reductase family J157_03647 PF00196 Bacterial regulatory proteins, luxR family J157_03647 PF00072 Response regulator receiver domain J157_03649 PF00512 His Kinase A (phospho-acceptor) domain J157_03649 PF08521 Two-component sensor kinase N-terminal J157_03649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03650 PF00072 Response regulator receiver domain J157_03650 PF00486 Transcriptional regulatory protein, C terminal J157_03652 PF03600 Citrate transporter J157_03654 PF00106 short chain dehydrogenase J157_03655 PF00356 Bacterial regulatory proteins, lacI family J157_03658 PF00128 Alpha amylase, catalytic domain J157_03661 PF03193 RsgA GTPase J157_03665 PF00593 TonB dependent receptor J157_03665 PF07715 TonB-dependent Receptor Plug Domain J157_03666 PF01522 Polysaccharide deacetylase J157_03667 PF00462 Glutaredoxin J157_03670 PF01527 Transposase J157_03675 PF02645 Uncharacterised protein, DegV family COG1307 J157_03676 PF01327 Polypeptide deformylase J157_03677 PF03960 ArsC family J157_03680 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J157_03681 PF01270 Glycosyl hydrolases family 8 J157_03682 PF03170 Bacterial cellulose synthase subunit J157_03683 PF00535 Glycosyl transferase family 2 J157_03683 PF07238 PilZ domain J157_03683 PF03552 Cellulose synthase J157_03686 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J157_03686 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J157_03693 PF07715 TonB-dependent Receptor Plug Domain J157_03693 PF00593 TonB dependent receptor J157_03695 PF00392 Bacterial regulatory proteins, gntR family J157_03695 PF07702 UTRA domain J157_03697 PF03958 Bacterial type II/III secretion system short domain J157_03697 PF00263 Bacterial type II and III secretion system protein J157_03699 PF10741 Type II secretion system (T2SS), protein M subtype b J157_03700 PF05137 Fimbrial assembly protein (PilN) J157_03701 PF03934 Type II secretion system (T2SS), protein K J157_03703 PF07963 Prokaryotic N-terminal methylation motif J157_03704 PF12019 Type II transport protein GspH J157_03705 PF08334 Type II secretion system (T2SS), protein G J157_03706 PF00482 Type II secretion system (T2SS), protein F J157_03707 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J157_03707 PF00437 Type II/IV secretion system protein J157_03708 PF04151 Bacterial pre-peptidase C-terminal domain J157_03708 PF00082 Subtilase family J157_03709 PF05662 Coiled stalk of trimeric autotransporter adhesin J157_03709 PF05658 Head domain of trimeric autotransporter adhesin J157_03709 PF03895 YadA-like membrane anchor domain J157_03709 PF13018 Extended Signal Peptide of Type V secretion system J157_03710 PF04151 Bacterial pre-peptidase C-terminal domain J157_03710 PF00082 Subtilase family J157_03711 PF05658 Head domain of trimeric autotransporter adhesin J157_03711 PF03895 YadA-like membrane anchor domain J157_03711 PF13018 Extended Signal Peptide of Type V secretion system J157_03711 PF05662 Coiled stalk of trimeric autotransporter adhesin J157_03712 PF02769 AIR synthase related protein, C-terminal domain J157_03712 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J157_03712 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J157_03713 PF13098 Thioredoxin-like domain J157_03713 PF10411 Disulfide bond isomerase protein N-terminus J157_03714 PF02899 Phage integrase, N-terminal SAM-like domain J157_03714 PF00589 Phage integrase family J157_03717 PF03739 Lipopolysaccharide export system permease LptF/LptG J157_03719 PF02789 Cytosol aminopeptidase family, N-terminal domain J157_03719 PF00883 Cytosol aminopeptidase family, catalytic domain J157_03722 PF08264 Anticodon-binding domain of tRNA J157_03722 PF00133 tRNA synthetases class I (I, L, M and V) J157_03722 PF10458 Valyl tRNA synthetase tRNA binding arm J157_03723 PF07715 TonB-dependent Receptor Plug Domain J157_03723 PF00593 TonB dependent receptor J157_03724 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J157_03724 PF01464 Transglycosylase SLT domain J157_03725 PF00544 Pectate lyase J157_03728 PF01066 CDP-alcohol phosphatidyltransferase J157_03730 PF04073 Aminoacyl-tRNA editing domain J157_03730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J157_03730 PF03129 Anticodon binding domain J157_03731 PF00816 H-NS histone family J157_03733 PF02405 Permease MlaE J157_03734 PF00005 ABC transporter J157_03735 PF02470 MlaD protein J157_03735 PF03886 ABC-type transport auxiliary lipoprotein component J157_03739 PF14307 Glycosyltransferase WbsX J157_03739 PF05045 Rhamnan synthesis protein F J157_03740 PF01144 Coenzyme A transferase J157_03741 PF01144 Coenzyme A transferase J157_03742 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J157_03742 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J157_03742 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J157_03742 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J157_03743 PF00483 Nucleotidyl transferase J157_03743 PF01050 Mannose-6-phosphate isomerase J157_03744 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J157_03744 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J157_03744 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J157_03745 PF04321 RmlD substrate binding domain J157_03746 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J157_03747 PF00483 Nucleotidyl transferase J157_03748 PF16363 GDP-mannose 4,6 dehydratase J157_03749 PF01012 Electron transfer flavoprotein domain J157_03750 PF01012 Electron transfer flavoprotein domain J157_03750 PF00766 Electron transfer flavoprotein FAD-binding domain J157_03752 PF01040 UbiA prenyltransferase family J157_03753 PF01565 FAD binding domain J157_03753 PF04030 D-arabinono-1,4-lactone oxidase J157_03754 PF00106 short chain dehydrogenase J157_03756 PF01370 NAD dependent epimerase/dehydratase family J157_03757 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J157_03757 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_03762 PF00535 Glycosyl transferase family 2 J157_03764 PF00005 ABC transporter J157_03764 PF14524 Wzt C-terminal domain J157_03766 PF01053 Cys/Met metabolism PLP-dependent enzyme J157_03767 PF00571 CBS domain J157_03767 PF00291 Pyridoxal-phosphate dependent enzyme J157_03771 PF00437 Type II/IV secretion system protein J157_03772 PF02798 Glutathione S-transferase, N-terminal domain J157_03772 PF14497 Glutathione S-transferase, C-terminal domain J157_03774 PF00270 DEAD/DEAH box helicase J157_03774 PF00271 Helicase conserved C-terminal domain J157_03777 PF00593 TonB dependent receptor J157_03777 PF07715 TonB-dependent Receptor Plug Domain J157_03778 PF01242 6-pyruvoyl tetrahydropterin synthase J157_03781 PF13185 GAF domain J157_03783 PF00756 Putative esterase J157_03784 PF00593 TonB dependent receptor J157_03784 PF07715 TonB-dependent Receptor Plug Domain J157_03785 PF13419 Haloacid dehalogenase-like hydrolase J157_03786 PF11799 impB/mucB/samB family C-terminal domain J157_03786 PF00817 impB/mucB/samB family J157_03787 PF07977 FabA-like domain J157_03788 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_03788 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_03790 PF01432 Peptidase family M3 J157_03793 PF00394 Multicopper oxidase J157_03793 PF07732 Multicopper oxidase J157_03793 PF07731 Multicopper oxidase J157_03794 PF05275 Copper resistance protein B precursor (CopB) J157_03795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J157_03801 PF01380 SIS domain J157_03802 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_03803 PF02687 FtsX-like permease family J157_03803 PF12704 MacB-like periplasmic core domain J157_03803 PF00005 ABC transporter J157_03804 PF12704 MacB-like periplasmic core domain J157_03804 PF00005 ABC transporter J157_03804 PF02687 FtsX-like permease family J157_03805 PF12704 MacB-like periplasmic core domain J157_03805 PF02687 FtsX-like permease family J157_03807 PF00072 Response regulator receiver domain J157_03807 PF00158 Sigma-54 interaction domain J157_03808 PF00132 Bacterial transferase hexapeptide (six repeats) J157_03808 PF14602 Hexapeptide repeat of succinyl-transferase J157_03808 PF12804 MobA-like NTP transferase domain J157_03811 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J157_03811 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J157_03812 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J157_03812 PF02874 ATP synthase alpha/beta family, beta-barrel domain J157_03813 PF00231 ATP synthase J157_03814 PF00306 ATP synthase alpha/beta chain, C terminal domain J157_03814 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J157_03814 PF02874 ATP synthase alpha/beta family, beta-barrel domain J157_03815 PF00213 ATP synthase delta (OSCP) subunit J157_03816 PF00430 ATP synthase B/B' CF(0) J157_03817 PF00137 ATP synthase subunit C J157_03818 PF00119 ATP synthase A chain J157_03822 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_03822 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J157_03824 PF00364 Biotin-requiring enzyme J157_03824 PF02817 e3 binding domain J157_03824 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J157_03830 PF03180 NLPA lipoprotein J157_03831 PF00528 Binding-protein-dependent transport system inner membrane component J157_03832 PF00005 ABC transporter J157_03832 PF09383 NIL domain J157_03833 PF00892 EamA-like transporter family J157_03834 PF04461 Protein of unknown function (DUF520) J157_03836 PF01627 Hpt domain J157_03836 PF00072 Response regulator receiver domain J157_03836 PF00989 PAS fold J157_03836 PF18415 Histidine kinase receptor ArcB trans-membrane domain J157_03836 PF00512 His Kinase A (phospho-acceptor) domain J157_03836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03840 PF13419 Haloacid dehalogenase-like hydrolase J157_03841 PF00849 RNA pseudouridylate synthase J157_03841 PF01479 S4 domain J157_03842 PF05175 Methyltransferase small domain J157_03842 PF08468 Methyltransferase small domain N-terminal J157_03844 PF07995 Glucose / Sorbosone dehydrogenase J157_03846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03846 PF00512 His Kinase A (phospho-acceptor) domain J157_03846 PF00989 PAS fold J157_03850 PF00842 Alanine racemase, C-terminal domain J157_03850 PF01168 Alanine racemase, N-terminal domain J157_03851 PF01266 FAD dependent oxidoreductase J157_03852 PF01037 Lrp/AsnC ligand binding domain J157_03854 PF01641 SelR domain J157_03856 PF01618 MotA/TolQ/ExbB proton channel family J157_03857 PF00691 OmpA family J157_03857 PF13677 Membrane MotB of proton-channel complex MotA/MotB J157_03862 PF01061 ABC-2 type transporter J157_03863 PF00005 ABC transporter J157_03864 PF00999 Sodium/hydrogen exchanger family J157_03865 PF02469 Fasciclin domain J157_03866 PF03167 Uracil DNA glycosylase superfamily J157_03868 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J157_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03870 PF03466 LysR substrate binding domain J157_03871 PF03358 NADPH-dependent FMN reductase J157_03872 PF00248 Aldo/keto reductase family J157_03874 PF05649 Peptidase family M13 J157_03874 PF01431 Peptidase family M13 J157_03878 PF13520 Amino acid permease J157_03880 PF04397 LytTr DNA-binding domain J157_03880 PF00072 Response regulator receiver domain J157_03881 PF02743 Cache domain J157_03881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_03881 PF06580 Histidine kinase J157_03881 PF00672 HAMP domain J157_03884 PF05974 Domain of unknown function (DUF892) J157_03885 PF05067 Manganese containing catalase J157_03888 PF08448 PAS fold J157_03888 PF01739 CheR methyltransferase, SAM binding domain J157_03888 PF03705 CheR methyltransferase, all-alpha domain J157_03888 PF01339 CheB methylesterase J157_03891 PF02954 Bacterial regulatory protein, Fis family J157_03891 PF00072 Response regulator receiver domain J157_03891 PF00158 Sigma-54 interaction domain J157_03893 PF01654 Cytochrome bd terminal oxidase subunit I J157_03894 PF02322 Cytochrome bd terminal oxidase subunit II J157_03898 PF16363 GDP-mannose 4,6 dehydratase J157_03900 PF03275 UDP-galactopyranose mutase J157_03902 PF00664 ABC transporter transmembrane region J157_03902 PF00005 ABC transporter J157_03905 PF13823 Alcohol dehydrogenase GroES-associated J157_03905 PF00107 Zinc-binding dehydrogenase J157_03905 PF08240 Alcohol dehydrogenase GroES-like domain J157_03914 PF07715 TonB-dependent Receptor Plug Domain J157_03914 PF00593 TonB dependent receptor J157_03917 PF00005 ABC transporter J157_03919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03919 PF03466 LysR substrate binding domain J157_03920 PF01042 Endoribonuclease L-PSP J157_03922 PF01527 Transposase J157_03926 PF02203 Tar ligand binding domain homologue J157_03926 PF00672 HAMP domain J157_03926 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J157_03929 PF03466 LysR substrate binding domain J157_03929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03930 PF02525 Flavodoxin-like fold J157_03939 PF00557 Metallopeptidase family M24 J157_03944 PF04545 Sigma-70, region 4 J157_03944 PF04539 Sigma-70 region 3 J157_03944 PF04542 Sigma-70 region 2 J157_03944 PF00140 Sigma-70 factor, region 1.2 J157_03944 PF03979 Sigma-70 factor, region 1.1 J157_03944 PF04546 Sigma-70, non-essential region J157_03945 PF02580 D-Tyr-tRNA(Tyr) deacylase J157_03946 PF03279 Bacterial lipid A biosynthesis acyltransferase J157_03948 PF00925 GTP cyclohydrolase II J157_03952 PF00535 Glycosyl transferase family 2 J157_03955 PF01029 NusB family J157_03955 PF01189 16S rRNA methyltransferase RsmB/F J157_03956 PF00551 Formyl transferase J157_03956 PF02911 Formyl transferase, C-terminal domain J157_03957 PF01327 Polypeptide deformylase J157_03958 PF01476 LysM domain J157_03959 PF17782 DprA winged helix domain J157_03959 PF02481 DNA recombination-mediator protein A J157_03960 PF04361 Protein of unknown function (DUF494) J157_03961 PF00114 Pilin (bacterial filament) J157_03961 PF07963 Prokaryotic N-terminal methylation motif J157_03963 PF01131 DNA topoisomerase J157_03963 PF13368 Topoisomerase C-terminal repeat J157_03963 PF01751 Toprim domain J157_03964 PF01300 Telomere recombination J157_03969 PF01343 Peptidase family S49 J157_03970 PF01554 MatE J157_03974 PF00270 DEAD/DEAH box helicase J157_03974 PF00271 Helicase conserved C-terminal domain J157_03974 PF17764 3′ DNA-binding domain (3′BD) J157_03974 PF18074 Primosomal protein N C-terminal domain J157_03974 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J157_03975 PF13417 Glutathione S-transferase, N-terminal domain J157_03975 PF00043 Glutathione S-transferase, C-terminal domain J157_03978 PF07992 Pyridine nucleotide-disulphide oxidoreductase J157_03979 PF03458 UPF0126 domain J157_03980 PF04542 Sigma-70 region 2 J157_03980 PF04545 Sigma-70, region 4 J157_03981 PF03167 Uracil DNA glycosylase superfamily J157_03982 PF00072 Response regulator receiver domain J157_03982 PF01339 CheB methylesterase J157_03983 PF18075 FtsX extracellular domain J157_03984 PF00005 ABC transporter J157_03985 PF00271 Helicase conserved C-terminal domain J157_03985 PF12300 ATP-dependent RNA helicase RhlB J157_03985 PF00270 DEAD/DEAH box helicase J157_03986 PF00085 Thioredoxin J157_03987 PF07497 Rho termination factor, RNA-binding domain J157_03987 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J157_03987 PF07498 Rho termination factor, N-terminal domain J157_03988 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J157_03989 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_03989 PF03466 LysR substrate binding domain J157_03991 PF03971 Monomeric isocitrate dehydrogenase J157_03994 PF09704 CRISPR-associated protein (Cas_Cas5) J157_03999 PF01867 CRISPR associated protein Cas1 J157_04000 PF09827 CRISPR associated protein Cas2 J157_04002 PF04972 BON domain J157_04002 PF01476 LysM domain J157_04003 PF14489 QueF-like protein J157_04003 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J157_04004 PF01546 Peptidase family M20/M25/M40 J157_04004 PF07687 Peptidase dimerisation domain J157_04005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_04006 PF00873 AcrB/AcrD/AcrF family J157_04007 PF00873 AcrB/AcrD/AcrF family J157_04008 PF07063 Domain of unknown function (DUF1338) J157_04016 PF01427 D-ala-D-ala dipeptidase J157_04017 PF01510 N-acetylmuramoyl-L-alanine amidase J157_04019 PF13378 Enolase C-terminal domain-like J157_04019 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J157_04021 PF13520 Amino acid permease J157_04024 PF05360 yiaA/B two helix domain J157_04025 PF07995 Glucose / Sorbosone dehydrogenase J157_04026 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_04026 PF01915 Glycosyl hydrolase family 3 C-terminal domain J157_04026 PF14310 Fibronectin type III-like domain J157_04027 PF02152 Dihydroneopterin aldolase J157_04028 PF00814 Glycoprotease family J157_04029 PF01165 Ribosomal protein S21 J157_04030 PF09424 Yqey-like protein J157_04031 PF03631 Virulence factor BrkB J157_04032 PF01807 CHC2 zinc finger J157_04032 PF08278 DNA primase DnaG DnaB-binding J157_04032 PF08275 DNA primase catalytic core, N-terminal domain J157_04032 PF10410 DnaB-helicase binding domain of primase J157_04033 PF13593 SBF-like CPA transporter family (DUF4137) J157_04035 PF01040 UbiA prenyltransferase family J157_04040 PF00510 Cytochrome c oxidase subunit III J157_04041 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J157_04043 PF00115 Cytochrome C and Quinol oxidase polypeptide I J157_04044 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J157_04044 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J157_04046 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J157_04046 PF00171 Aldehyde dehydrogenase family J157_04046 PF01619 Proline dehydrogenase J157_04046 PF14850 DNA-binding domain of Proline dehydrogenase J157_04054 PF00579 tRNA synthetases class I (W and Y) J157_04055 PF01551 Peptidase family M23 J157_04055 PF04225 Opacity-associated protein A LysM-like domain J157_04056 PF03702 Anhydro-N-acetylmuramic acid kinase J157_04058 PF07690 Major Facilitator Superfamily J157_04059 PF03372 Endonuclease/Exonuclease/phosphatase family J157_04060 PF00156 Phosphoribosyl transferase domain J157_04062 PF13614 AAA domain J157_04063 PF17762 HTH domain found in ParB protein J157_04063 PF02195 ParB-like nuclease domain J157_04065 PF01370 NAD dependent epimerase/dehydratase family J157_04066 PF00535 Glycosyl transferase family 2 J157_04069 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J157_04069 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J157_04069 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J157_04069 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J157_04070 PF00692 dUTPase J157_04071 PF02441 Flavoprotein J157_04071 PF04127 DNA / pantothenate metabolism flavoprotein J157_04072 PF04002 RadC-like JAB domain J157_04073 PF05746 DALR anticodon binding domain J157_04073 PF00750 tRNA synthetases class I (R) J157_04073 PF03485 Arginyl tRNA synthetase N terminal domain J157_04076 PF00106 short chain dehydrogenase J157_04077 PF01757 Acyltransferase family J157_04078 PF03033 Glycosyltransferase family 28 N-terminal domain J157_04079 PF00550 Phosphopantetheine attachment site J157_04079 PF00975 Thioesterase domain J157_04079 PF00501 AMP-binding enzyme J157_04079 PF00668 Condensation domain J157_04079 PF13193 AMP-binding enzyme C-terminal domain J157_04080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J157_04080 PF17944 Arginine decarboxylase C-terminal helical extension J157_04080 PF17810 Arginine decarboxylase helical bundle domain J157_04081 PF17284 Spermidine synthase tetramerisation domain J157_04086 PF00543 Nitrogen regulatory protein P-II J157_04087 PF04380 Membrane fusogenic activity J157_04088 PF13335 Magnesium chelatase, subunit ChlI C-terminal J157_04088 PF01078 Magnesium chelatase, subunit ChlI J157_04091 PF00563 EAL domain J157_04091 PF12792 CSS motif domain associated with EAL J157_04092 PF00487 Fatty acid desaturase J157_04093 PF00175 Oxidoreductase NAD-binding domain J157_04093 PF00111 2Fe-2S iron-sulfur cluster binding domain J157_04093 PF00970 Oxidoreductase FAD-binding domain J157_04094 PF00440 Bacterial regulatory proteins, tetR family J157_04100 PF01139 tRNA-splicing ligase RtcB J157_04108 PF08338 Domain of unknown function (DUF1731) J157_04108 PF01370 NAD dependent epimerase/dehydratase family J157_04109 PF00486 Transcriptional regulatory protein, C terminal J157_04109 PF00072 Response regulator receiver domain J157_04110 PF00512 His Kinase A (phospho-acceptor) domain J157_04110 PF08521 Two-component sensor kinase N-terminal J157_04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_04114 PF00595 PDZ domain J157_04118 PF01594 AI-2E family transporter J157_04119 PF13419 Haloacid dehalogenase-like hydrolase J157_04120 PF02789 Cytosol aminopeptidase family, N-terminal domain J157_04120 PF00883 Cytosol aminopeptidase family, catalytic domain J157_04122 PF08281 Sigma-70, region 4 J157_04122 PF04542 Sigma-70 region 2 J157_04123 PF00199 Catalase J157_04126 PF00196 Bacterial regulatory proteins, luxR family J157_04126 PF00072 Response regulator receiver domain J157_04127 PF07730 Histidine kinase J157_04128 PF13533 Biotin-lipoyl like J157_04129 PF00005 ABC transporter J157_04133 PF00892 EamA-like transporter family J157_04134 PF00892 EamA-like transporter family J157_04135 PF00892 EamA-like transporter family J157_04138 PF00753 Metallo-beta-lactamase superfamily J157_04139 PF00579 tRNA synthetases class I (W and Y) J157_04140 PF05532 CsbD-like J157_04143 PF00491 Arginase family J157_04148 PF02223 Thymidylate kinase J157_04151 PF03309 Type III pantothenate kinase J157_04152 PF02237 Biotin protein ligase C terminal domain J157_04152 PF03099 Biotin/lipoate A/B protein ligase family J157_04152 PF08279 HTH domain J157_04154 PF06167 Glucose-regulated metallo-peptidase M90 J157_04157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_04157 PF00672 HAMP domain J157_04157 PF00512 His Kinase A (phospho-acceptor) domain J157_04158 PF00072 Response regulator receiver domain J157_04158 PF00486 Transcriptional regulatory protein, C terminal J157_04160 PF01207 Dihydrouridine synthase (Dus) J157_04163 PF00199 Catalase J157_04163 PF06628 Catalase-related immune-responsive J157_04164 PF13307 Helicase C-terminal domain J157_04164 PF06733 DEAD_2 J157_04167 PF01488 Shikimate / quinate 5-dehydrogenase J157_04167 PF08501 Shikimate dehydrogenase substrate binding domain J157_04167 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J157_04169 PF00258 Flavodoxin J157_04169 PF00175 Oxidoreductase NAD-binding domain J157_04169 PF00667 FAD binding domain J157_04172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_04172 PF03466 LysR substrate binding domain J157_04174 PF00490 Delta-aminolevulinic acid dehydratase J157_04178 PF00326 Prolyl oligopeptidase family J157_04178 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J157_04179 PF02798 Glutathione S-transferase, N-terminal domain J157_04179 PF00043 Glutathione S-transferase, C-terminal domain J157_04183 PF04820 Tryptophan halogenase J157_04186 PF00005 ABC transporter J157_04188 PF01381 Helix-turn-helix J157_04190 PF01229 Glycosyl hydrolases family 39 J157_04191 PF02583 Metal-sensitive transcriptional repressor J157_04192 PF16916 Dimerisation domain of Zinc Transporter J157_04192 PF01545 Cation efflux family J157_04194 PF00593 TonB dependent receptor J157_04194 PF07715 TonB-dependent Receptor Plug Domain J157_04196 PF12833 Helix-turn-helix domain J157_04196 PF01965 DJ-1/PfpI family J157_04197 PF00970 Oxidoreductase FAD-binding domain J157_04197 PF00111 2Fe-2S iron-sulfur cluster binding domain J157_04197 PF00175 Oxidoreductase NAD-binding domain J157_04198 PF00005 ABC transporter J157_04199 PF01061 ABC-2 type transporter J157_04202 PF02558 Ketopantoate reductase PanE/ApbA J157_04202 PF08546 Ketopantoate reductase PanE/ApbA C terminal J157_04208 PF00268 Ribonucleotide reductase, small chain J157_04209 PF02867 Ribonucleotide reductase, barrel domain J157_04209 PF03477 ATP cone domain J157_04209 PF00317 Ribonucleotide reductase, all-alpha domain J157_04211 PF13607 Succinyl-CoA ligase like flavodoxin domain J157_04211 PF00583 Acetyltransferase (GNAT) family J157_04211 PF13380 CoA binding domain J157_04212 PF03448 MgtE intracellular N domain J157_04212 PF01769 Divalent cation transporter J157_04212 PF00571 CBS domain J157_04213 PF00194 Eukaryotic-type carbonic anhydrase J157_04214 PF02254 TrkA-N domain J157_04214 PF00999 Sodium/hydrogen exchanger family J157_04215 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J157_04215 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J157_04216 PF00723 Glycosyl hydrolases family 15 J157_04219 PF05166 YcgL domain J157_04220 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_04220 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_04222 PF00535 Glycosyl transferase family 2 J157_04233 PF07977 FabA-like domain J157_04234 PF01553 Acyltransferase J157_04236 PF00550 Phosphopantetheine attachment site J157_04237 PF04820 Tryptophan halogenase J157_04241 PF07676 WD40-like Beta Propeller Repeat J157_04241 PF00326 Prolyl oligopeptidase family J157_04244 PF01218 Coproporphyrinogen III oxidase J157_04245 PF01612 3'-5' exonuclease J157_04245 PF01367 5'-3' exonuclease, C-terminal SAM fold J157_04245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J157_04245 PF00476 DNA polymerase family A J157_04251 PF03793 PASTA domain J157_04251 PF00069 Protein kinase domain J157_04259 PF04717 Type VI secretion system, phage-baseplate injector J157_04262 PF00069 Protein kinase domain J157_04262 PF03793 PASTA domain J157_04264 PF04542 Sigma-70 region 2 J157_04264 PF08281 Sigma-70, region 4 J157_04267 PF00328 Histidine phosphatase superfamily (branch 2) J157_04274 PF10431 C-terminal, D2-small domain, of ClpB protein J157_04274 PF00004 ATPase family associated with various cellular activities (AAA) J157_04274 PF07724 AAA domain (Cdc48 subfamily) J157_04274 PF17871 AAA lid domain J157_04279 PF05638 Type VI secretion system effector, Hcp J157_04284 PF14602 Hexapeptide repeat of succinyl-transferase J157_04284 PF12464 Maltose acetyltransferase J157_04285 PF00580 UvrD/REP helicase N-terminal domain J157_04285 PF13361 UvrD-like helicase C-terminal domain J157_04287 PF13091 PLD-like domain J157_04287 PF13396 Phospholipase_D-nuclease N-terminal J157_04288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_04288 PF03466 LysR substrate binding domain J157_04289 PF03737 Aldolase/RraA J157_04290 PF04303 PrpF protein J157_04291 PF04909 Amidohydrolase J157_04292 PF00471 Ribosomal protein L33 J157_04293 PF00830 Ribosomal L28 family J157_04294 PF00873 AcrB/AcrD/AcrF family J157_04295 PF13533 Biotin-lipoyl like J157_04299 PF02527 rRNA small subunit methyltransferase G J157_04300 PF16655 PhoD-like phosphatase, N-terminal domain J157_04300 PF09423 PhoD-like phosphatase J157_04302 PF09423 PhoD-like phosphatase J157_04302 PF16655 PhoD-like phosphatase, N-terminal domain J157_04303 PF01648 4'-phosphopantetheinyl transferase superfamily J157_04304 PF04226 Transglycosylase associated protein J157_04306 PF03372 Endonuclease/Exonuclease/phosphatase family J157_04308 PF00480 ROK family J157_04310 PF09312 SurA N-terminal domain J157_04312 PF00474 Sodium:solute symporter family J157_04313 PF04341 Protein of unknown function, DUF485 J157_04315 PF13193 AMP-binding enzyme C-terminal domain J157_04315 PF16177 Acetyl-coenzyme A synthetase N-terminus J157_04315 PF00501 AMP-binding enzyme J157_04316 PF00072 Response regulator receiver domain J157_04316 PF00196 Bacterial regulatory proteins, luxR family J157_04321 PF04616 Glycosyl hydrolases family 43 J157_04321 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J157_04322 PF00248 Aldo/keto reductase family J157_04325 PF01557 Fumarylacetoacetate (FAA) hydrolase family J157_04326 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J157_04326 PF13378 Enolase C-terminal domain-like J157_04328 PF05336 L-rhamnose mutarotase J157_04329 PF07690 Major Facilitator Superfamily J157_04330 PF09339 IclR helix-turn-helix domain J157_04330 PF01614 Bacterial transcriptional regulator J157_04331 PF02659 Putative manganese efflux pump J157_04332 PF00512 His Kinase A (phospho-acceptor) domain J157_04332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_04334 PF06165 Glycosyltransferase family 36 J157_04334 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J157_04337 PF13360 PQQ-like domain J157_04337 PF13570 PQQ-like domain J157_04337 PF01011 PQQ enzyme repeat J157_04341 PF04357 TamB, inner membrane protein subunit of TAM complex J157_04342 PF01103 Surface antigen J157_04342 PF17243 POTRA domain TamA domain 1 J157_04345 PF01527 Transposase J157_04346 PF00665 Integrase core domain J157_04346 PF13276 HTH-like domain J157_04346 PF13333 Integrase core domain J157_04347 PF00664 ABC transporter transmembrane region J157_04347 PF00005 ABC transporter J157_04347 PF03412 Peptidase C39 family J157_04349 PF02092 Glycyl-tRNA synthetase beta subunit J157_04349 PF05746 DALR anticodon binding domain J157_04350 PF02091 Glycyl-tRNA synthetase alpha subunit J157_04351 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J157_04351 PF00437 Type II/IV secretion system protein J157_04353 PF00958 GMP synthase C terminal domain J157_04353 PF00117 Glutamine amidotransferase class-I J157_04355 PF00902 Sec-independent protein translocase protein (TatC) J157_04356 PF02416 mttA/Hcf106 family J157_04357 PF02416 mttA/Hcf106 family J157_04359 PF00762 Ferrochelatase J157_04360 PF12697 Alpha/beta hydrolase family J157_04362 PF04381 Putative exonuclease, RdgC J157_04363 PF01171 PP-loop family J157_04365 PF00356 Bacterial regulatory proteins, lacI family J157_04366 PF07477 Glycosyl hydrolase family 67 C-terminus J157_04366 PF07488 Glycosyl hydrolase family 67 middle domain J157_04366 PF03648 Glycosyl hydrolase family 67 N-terminus J157_04368 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J157_04368 PF13378 Enolase C-terminal domain-like J157_04369 PF04616 Glycosyl hydrolases family 43 J157_04369 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J157_04370 PF00933 Glycosyl hydrolase family 3 N terminal domain J157_04370 PF14310 Fibronectin type III-like domain J157_04370 PF07691 PA14 domain J157_04370 PF01915 Glycosyl hydrolase family 3 C-terminal domain J157_04371 PF08125 Mannitol dehydrogenase C-terminal domain J157_04371 PF01232 Mannitol dehydrogenase Rossmann domain J157_04376 PF00171 Aldehyde dehydrogenase family J157_04379 PF00202 Aminotransferase class-III J157_04380 PF00202 Aminotransferase class-III J157_04382 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J157_04382 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J157_04385 PF08450 SMP-30/Gluconolactonase/LRE-like region J157_04386 PF00331 Glycosyl hydrolase family 10 J157_04387 PF16355 Domain of unknown function (DUF4982) J157_04387 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J157_04387 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J157_04387 PF00703 Glycosyl hydrolases family 2 J157_04387 PF02837 Glycosyl hydrolases family 2, sugar binding domain J157_04388 PF02614 Glucuronate isomerase J157_04389 PF00553 Cellulose binding domain J157_04389 PF00331 Glycosyl hydrolase family 10 J157_04389 PF03422 Carbohydrate binding module (family 6) J157_04391 PF00331 Glycosyl hydrolase family 10 J157_04391 PF03422 Carbohydrate binding module (family 6) J157_04391 PF00553 Cellulose binding domain J157_04395 PF04616 Glycosyl hydrolases family 43 J157_04405 PF00107 Zinc-binding dehydrogenase J157_04405 PF08240 Alcohol dehydrogenase GroES-like domain J157_04405 PF00109 Beta-ketoacyl synthase, N-terminal domain J157_04405 PF16197 Ketoacyl-synthetase C-terminal extension J157_04405 PF08659 KR domain J157_04405 PF00550 Phosphopantetheine attachment site J157_04405 PF14765 Polyketide synthase dehydratase J157_04405 PF02801 Beta-ketoacyl synthase, C-terminal domain J157_04405 PF00698 Acyl transferase domain J157_04406 PF01553 Acyltransferase J157_04408 PF00356 Bacterial regulatory proteins, lacI family J157_04411 PF04820 Tryptophan halogenase J157_04412 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J157_04413 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J157_04415 PF04337 Protein of unknown function, DUF480 J157_04418 PF00580 UvrD/REP helicase N-terminal domain J157_04418 PF13361 UvrD-like helicase C-terminal domain J157_04419 PF00265 Thymidine kinase J157_04420 PF00360 Phytochrome region J157_04420 PF08446 PAS fold J157_04420 PF00512 His Kinase A (phospho-acceptor) domain J157_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J157_04420 PF01590 GAF domain J157_04421 PF04349 Periplasmic glucan biosynthesis protein, MdoG J157_04423 PF06827 Zinc finger found in FPG and IleRS J157_04423 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J157_04423 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J157_04430 PF03594 Benzoate membrane transport protein J157_04431 PF08446 PAS fold J157_04431 PF01590 GAF domain J157_04431 PF00360 Phytochrome region J157_04431 PF13426 PAS domain J157_04432 PF01126 Heme oxygenase J157_04433 PF07690 Major Facilitator Superfamily J157_04434 PF01263 Aldose 1-epimerase J157_04436 PF02810 SEC-C motif J157_04437 PF01925 Sulfite exporter TauE/SafE J157_04441 PF01227 GTP cyclohydrolase I J157_04443 PF07869 Protein of unknown function (DUF1656) J157_04444 PF00529 HlyD membrane-fusion protein of T1SS J157_04444 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J157_04445 PF02321 Outer membrane efflux protein J157_04446 PF04632 Fusaric acid resistance protein family J157_04447 PF00083 Sugar (and other) transporter J157_04448 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J157_04449 PF13396 Phospholipase_D-nuclease N-terminal J157_04449 PF13091 PLD-like domain J157_04454 PF01850 PIN domain J157_04459 PF00849 RNA pseudouridylate synthase J157_04461 PF01527 Transposase J157_04462 PF00665 Integrase core domain J157_04462 PF13333 Integrase core domain J157_04462 PF13276 HTH-like domain J157_04465 PF02785 Biotin carboxylase C-terminal domain J157_04465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J157_04465 PF00289 Biotin carboxylase, N-terminal domain J157_04466 PF01425 Amidase J157_04473 PF13538 UvrD-like helicase C-terminal domain J157_04476 PF12705 PD-(D/E)XK nuclease superfamily J157_04476 PF00580 UvrD/REP helicase N-terminal domain J157_04476 PF13361 UvrD-like helicase C-terminal domain J157_04477 PF17946 RecC C-terminal domain J157_04479 PF00005 ABC transporter J157_04480 PF02405 Permease MlaE J157_04481 PF02470 MlaD protein J157_04482 PF05494 MlaC protein J157_04484 PF04333 MlaA lipoprotein J157_04486 PF00255 Glutathione peroxidase J157_04488 PF02646 RmuC family J157_04489 PF08240 Alcohol dehydrogenase GroES-like domain J157_04489 PF00107 Zinc-binding dehydrogenase J157_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J157_04490 PF03466 LysR substrate binding domain J157_04492 PF13417 Glutathione S-transferase, N-terminal domain J157_04492 PF00043 Glutathione S-transferase, C-terminal domain J157_04494 PF13520 Amino acid permease J157_04495 PF07971 Glycosyl hydrolase family 92 J157_04495 PF17678 Glycosyl hydrolase family 92 N-terminal domain J157_04496 PF10947 Protein of unknown function (DUF2628) J157_04497 PF00990 Diguanylate cyclase, GGDEF domain J157_04498 PF13556 PucR C-terminal helix-turn-helix domain J157_04498 PF17853 GGDEF-like domain J157_04498 PF05651 Putative sugar diacid recognition J157_04499 PF02595 Glycerate kinase family J157_04500 PF07690 Major Facilitator Superfamily J157_04503 PF10672 S-adenosylmethionine-dependent methyltransferase J157_04503 PF17785 PUA-like domain J157_04505 PF03741 Integral membrane protein TerC family J157_04506 PF01694 Rhomboid family J157_04507 PF03009 Glycerophosphoryl diester phosphodiesterase family J157_04509 PF01569 PAP2 superfamily J157_04510 PF10396 GTP-binding protein TrmE N-terminus J157_04510 PF12631 MnmE helical domain J157_04510 PF01926 50S ribosome-binding GTPase J157_04511 PF01522 Polysaccharide deacetylase J157_04512 PF02096 60Kd inner membrane protein J157_04512 PF14849 YidC periplasmic domain J157_04513 PF00825 Ribonuclease P J157_04514 PF00468 Ribosomal protein L34