J172_00002 PF01850 PIN domain J172_00013 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_00016 PF03090 J172_00016 J172_00016 PF08708 Primase C terminal 1 (PriCT-1) J172_00017 PF03377 Xanthomonas avirulence protein, Avr/PthA J172_00019 PF07929 Plasmid pRiA4b ORF-3-like protein J172_00021 PF02452 PemK-like protein J172_00023 PF00239 Resolvase, N terminal domain J172_00025 PF01526 J172_00025 J172_00026 PF01609 Transposase DDE domain J172_00028 PF01526 J172_00028 J172_00029 PF13700 J172_00029 J172_00030 PF13470 J172_00030 J172_00031 PF16762 J172_00031 J172_00032 PF00239 Resolvase, N terminal domain J172_00033 PF03377 Xanthomonas avirulence protein, Avr/PthA J172_00039 PF01435 Peptidase family M48 J172_00041 PF01471 Putative peptidoglycan binding domain J172_00041 PF13406 Transglycosylase SLT domain J172_00042 PF01526 J172_00042 J172_00042 PF13700 J172_00042 J172_00043 PF00589 Phage integrase family J172_00044 PF11740 J172_00044 J172_00046 PF00665 Integrase core domain J172_00047 PF01527 Transposase J172_00048 PF03377 Xanthomonas avirulence protein, Avr/PthA J172_00049 PF03090 J172_00049 J172_00049 PF08708 Primase C terminal 1 (PriCT-1) J172_00052 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_00064 PF10412 Type IV secretion-system coupling protein DNA-binding domain J172_00065 PF08751 TrwC relaxase J172_00065 PF13538 UvrD-like helicase C-terminal domain J172_00065 PF13604 AAA domain J172_00066 PF02452 PemK-like protein J172_00067 PF11455 J172_00067 J172_00070 PF01464 Transglycosylase SLT domain J172_00071 PF00437 Type II/IV secretion system protein J172_00072 PF03743 Bacterial conjugation TrbI-like protein J172_00073 PF03524 Conjugal transfer protein J172_00074 PF04335 VirB8 protein J172_00075 PF04610 J172_00075 J172_00078 PF07996 Type IV secretion system proteins J172_00079 PF03135 J172_00079 J172_00080 PF05101 J172_00080 J172_00081 PF04956 J172_00081 J172_00084 PF00665 Integrase core domain J172_00085 PF01527 Transposase J172_00087 PF16509 J172_00087 J172_00088 PF02195 ParB-like nuclease domain J172_00088 PF08535 KorB domain J172_00089 PF13614 AAA domain J172_00090 PF04796 J172_00090 J172_00091 PF06414 Zeta toxin J172_00093 PF01850 PIN domain J172_00094 PF04014 Antidote-toxin recognition MazE J172_00095 PF00239 Resolvase, N terminal domain J172_00096 PF13333 J172_00096 J172_00097 PF00665 Integrase core domain J172_00098 PF03377 Xanthomonas avirulence protein, Avr/PthA J172_00099 PF01526 J172_00099 J172_00100 PF13700 J172_00100 J172_00101 PF13470 J172_00101 J172_00102 PF16762 J172_00102 J172_00103 PF00239 Resolvase, N terminal domain J172_00104 PF00308 Bacterial dnaA protein J172_00104 PF08299 Bacterial dnaA protein helix-turn-helix J172_00104 PF11638 DnaA N-terminal domain J172_00105 PF00712 DNA polymerase III beta subunit, N-terminal domain J172_00105 PF02767 DNA polymerase III beta subunit, central domain J172_00105 PF02768 DNA polymerase III beta subunit, C-terminal domain J172_00106 PF02463 RecF/RecN/SMC N terminal domain J172_00108 PF00204 DNA gyrase B J172_00108 PF00986 DNA gyrase B subunit, carboxyl terminus J172_00108 PF01751 Toprim domain J172_00108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00109 PF02517 CAAX protease self-immunity J172_00110 PF01435 Peptidase family M48 J172_00111 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) J172_00112 PF03544 Gram-negative bacterial TonB protein C-terminal J172_00113 PF01618 J172_00113 J172_00114 PF02472 Biopolymer transport protein ExbD/TolR J172_00115 PF02472 Biopolymer transport protein ExbD/TolR J172_00116 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J172_00118 PF13091 PLD-like domain J172_00121 PF04055 Radical SAM superfamily J172_00122 PF13640 2OG-Fe(II) oxygenase superfamily J172_00123 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J172_00124 PF01694 Rhomboid family J172_00125 PF08850 J172_00125 J172_00126 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J172_00126 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J172_00127 PF03572 Peptidase family S41 J172_00127 PF13180 PDZ domain J172_00128 PF01551 Peptidase family M23 J172_00130 PF02225 PA domain J172_00130 PF04389 Peptidase family M28 J172_00131 PF13670 J172_00131 J172_00132 PF00150 Cellulase (glycosyl hydrolase family 5) J172_00133 PF00150 Cellulase (glycosyl hydrolase family 5) J172_00134 PF00150 Cellulase (glycosyl hydrolase family 5) J172_00135 PF00107 Zinc-binding dehydrogenase J172_00135 PF08240 Alcohol dehydrogenase GroES-like domain J172_00136 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_00136 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J172_00137 PF00310 Glutamine amidotransferases class-II J172_00137 PF01493 GXGXG motif J172_00137 PF01645 Conserved region in glutamate synthase J172_00137 PF04898 Glutamate synthase central domain J172_00138 PF11720 Peptidase inhibitor I78 family J172_00139 PF01028 Eukaryotic DNA topoisomerase I, catalytic core J172_00141 PF01804 Penicillin amidase J172_00142 PF05368 NmrA-like family J172_00143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00143 PF03466 LysR substrate binding domain J172_00144 PF00534 Glycosyl transferases group 1 J172_00144 PF13439 Glycosyltransferase Family 4 J172_00145 PF00534 Glycosyl transferases group 1 J172_00145 PF13439 Glycosyltransferase Family 4 J172_00146 PF02397 J172_00146 J172_00146 PF13727 CoA-binding domain J172_00147 PF02350 UDP-N-acetylglucosamine 2-epimerase J172_00148 PF04932 J172_00148 J172_00149 PF03808 J172_00149 J172_00150 PF13439 Glycosyltransferase Family 4 J172_00150 PF13692 Glycosyl transferases group 1 J172_00153 PF13489 Methyltransferase domain J172_00154 PF00733 Asparagine synthase J172_00154 PF13537 Glutamine amidotransferase domain J172_00156 PF05711 Macrocin-O-methyltransferase (TylF) J172_00157 PF01370 NAD dependent epimerase/dehydratase family J172_00159 PF01943 J172_00159 J172_00159 PF14667 Polysaccharide biosynthesis C-terminal domain J172_00160 PF00005 ABC transporter J172_00160 PF00664 ABC transporter transmembrane region J172_00161 PF13471 J172_00161 J172_00162 PF00733 Asparagine synthase J172_00162 PF13537 Glutamine amidotransferase domain J172_00164 PF13847 Methyltransferase domain J172_00165 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J172_00167 PF00685 Sulfotransferase domain J172_00168 PF13673 Acetyltransferase (GNAT) domain J172_00169 PF07484 Phage Tail Collar Domain J172_00170 PF07484 Phage Tail Collar Domain J172_00171 PF07484 Phage Tail Collar Domain J172_00172 PF14907 Uncharacterised nucleotidyltransferase J172_00173 PF03965 Penicillinase repressor J172_00174 PF05569 BlaR1 peptidase M56 J172_00177 PF03435 Saccharopine dehydrogenase J172_00179 PF08975 Domain of unknown function (DUF1868) J172_00180 PF00593 TonB dependent receptor J172_00180 PF07715 TonB-dependent Receptor Plug Domain J172_00181 PF00480 ROK family J172_00182 PF03009 Glycerophosphoryl diester phosphodiesterase family J172_00183 PF13482 RNase_H superfamily J172_00184 PF00270 DEAD/DEAH box helicase J172_00184 PF00271 Helicase conserved C-terminal domain J172_00184 PF09369 J172_00184 J172_00185 PF03006 J172_00185 J172_00186 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J172_00187 PF05016 Plasmid stabilisation system protein J172_00188 PF00106 short chain dehydrogenase J172_00189 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00190 PF03466 LysR substrate binding domain J172_00191 PF14305 J172_00191 J172_00194 PF02525 Flavodoxin-like fold J172_00195 PF10592 J172_00195 J172_00196 PF01527 Transposase J172_00197 PF00665 Integrase core domain J172_00197 PF13276 J172_00197 J172_00199 PF01609 Transposase DDE domain J172_00205 PF05532 CsbD-like J172_00206 PF08668 HDOD domain J172_00207 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J172_00209 PF01447 Thermolysin metallopeptidase, catalytic domain J172_00209 PF02868 Thermolysin metallopeptidase, alpha-helical domain J172_00210 PF13460 NADH(P)-binding J172_00211 PF00293 NUDIX domain J172_00212 PF01435 Peptidase family M48 J172_00213 PF10116 J172_00213 J172_00214 PF00085 Thioredoxin J172_00215 PF00083 Sugar (and other) transporter J172_00216 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J172_00217 PF12787 J172_00217 J172_00218 PF06080 J172_00218 J172_00221 PF07584 J172_00221 J172_00222 PF01882 J172_00222 J172_00223 PF07726 ATPase family associated with various cellular activities (AAA) J172_00224 PF13709 Domain of unknown function (DUF4159) J172_00225 PF01523 Putative modulator of DNA gyrase J172_00226 PF01523 Putative modulator of DNA gyrase J172_00227 PF01523 Putative modulator of DNA gyrase J172_00229 PF00316 Fructose-1-6-bisphosphatase J172_00230 PF00155 Aminotransferase class I and II J172_00231 PF00593 TonB dependent receptor J172_00231 PF07715 TonB-dependent Receptor Plug Domain J172_00233 PF07883 Cupin domain J172_00234 PF00171 Aldehyde dehydrogenase family J172_00235 PF05610 J172_00235 J172_00238 PF02735 Ku70/Ku80 beta-barrel domain J172_00239 PF01070 FMN-dependent dehydrogenase J172_00240 PF00144 Beta-lactamase J172_00241 PF07730 Histidine kinase J172_00242 PF00072 Response regulator receiver domain J172_00242 PF00196 Bacterial regulatory proteins, luxR family J172_00246 PF00486 Transcriptional regulatory protein, C terminal J172_00246 PF13191 AAA ATPase domain J172_00247 PF07055 Enoyl reductase FAD binding domain J172_00247 PF12241 Trans-2-enoyl-CoA reductase catalytic region J172_00247 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J172_00249 PF00294 pfkB family carbohydrate kinase J172_00250 PF00593 TonB dependent receptor J172_00250 PF07715 TonB-dependent Receptor Plug Domain J172_00251 PF13385 Concanavalin A-like lectin/glucanases superfamily J172_00254 PF13619 J172_00254 J172_00255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J172_00256 PF01609 Transposase DDE domain J172_00260 PF01527 Transposase J172_00261 PF00665 Integrase core domain J172_00261 PF13276 J172_00261 J172_00262 PF00128 Alpha amylase, catalytic domain J172_00262 PF11896 Domain of unknown function (DUF3416) J172_00263 PF00128 Alpha amylase, catalytic domain J172_00263 PF16657 J172_00263 J172_00264 PF00128 Alpha amylase, catalytic domain J172_00264 PF02806 Alpha amylase, C-terminal all-beta domain J172_00264 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J172_00265 PF12850 Calcineurin-like phosphoesterase superfamily domain J172_00266 PF00248 Aldo/keto reductase family J172_00267 PF00135 Carboxylesterase family J172_00268 PF07859 alpha/beta hydrolase fold J172_00270 PF03480 Bacterial extracellular solute-binding protein, family 7 J172_00271 PF04290 J172_00271 J172_00272 PF06808 J172_00272 J172_00273 PF04616 Glycosyl hydrolases family 43 J172_00274 PF00356 Bacterial regulatory proteins, lacI family J172_00274 PF13377 Periplasmic binding protein-like domain J172_00275 PF04962 KduI/IolB family J172_00276 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00277 PF02502 Ribose/Galactose Isomerase J172_00277 PF12408 Ribose-5-phosphate isomerase J172_00278 PF07883 Cupin domain J172_00278 PF13472 GDSL-like Lipase/Acylhydrolase family J172_00279 PF05299 M61 glycyl aminopeptidase J172_00280 PF14300 Domain of unknown function (DUF4375) J172_00281 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J172_00282 PF01037 AsnC family J172_00282 PF13404 AsnC-type helix-turn-helix domain J172_00283 PF00593 TonB dependent receptor J172_00283 PF07715 TonB-dependent Receptor Plug Domain J172_00284 PF01734 Patatin-like phospholipase J172_00285 PF01987 Mitochondrial biogenesis AIM24 J172_00286 PF00005 ABC transporter J172_00287 PF00487 J172_00287 J172_00288 PF13202 EF hand J172_00289 PF00005 ABC transporter J172_00290 PF00528 Binding-protein-dependent transport system inner membrane component J172_00290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J172_00291 PF00266 Aminotransferase class-V J172_00292 PF03781 Sulfatase-modifying factor enzyme 1 J172_00292 PF12867 DinB superfamily J172_00293 PF10017 J172_00293 J172_00294 PF13657 HipA N-terminal domain J172_00295 PF13560 Helix-turn-helix domain J172_00296 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J172_00298 PF03547 J172_00298 J172_00299 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_00300 PF00300 Histidine phosphatase superfamily (branch 1) J172_00301 PF04264 YceI-like domain J172_00302 PF13091 PLD-like domain J172_00303 PF03061 Thioesterase superfamily J172_00304 PF01553 Acyltransferase J172_00305 PF12146 Putative lysophospholipase J172_00307 PF13432 Tetratricopeptide repeat J172_00308 PF01161 Phosphatidylethanolamine-binding protein J172_00309 PF00107 Zinc-binding dehydrogenase J172_00309 PF08240 Alcohol dehydrogenase GroES-like domain J172_00310 PF03724 META domain J172_00310 PF14302 J172_00310 J172_00311 PF02673 J172_00311 J172_00312 PF00120 Glutamine synthetase, catalytic domain J172_00312 PF03951 Glutamine synthetase, beta-Grasp domain J172_00313 PF00543 Nitrogen regulatory protein P-II J172_00314 PF00909 Ammonium Transporter Family J172_00315 PF00512 His Kinase A (phospho-acceptor) domain J172_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00316 PF00072 Response regulator receiver domain J172_00316 PF00158 Sigma-54 interaction domain J172_00316 PF02954 Bacterial regulatory protein, Fis family J172_00317 PF00080 Copper/zinc superoxide dismutase (SODC) J172_00318 PF00080 Copper/zinc superoxide dismutase (SODC) J172_00319 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_00321 PF00108 Thiolase, N-terminal domain J172_00321 PF02803 Thiolase, C-terminal domain J172_00322 PF07219 J172_00322 J172_00323 PF04375 J172_00323 J172_00324 PF02602 Uroporphyrinogen-III synthase HemD J172_00325 PF01755 J172_00325 J172_00326 PF09500 Putative thioesterase (yiiD_Cterm) J172_00328 PF00581 Rhodanese-like domain J172_00329 PF02556 Preprotein translocase subunit SecB J172_00330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J172_00330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J172_00332 PF00205 Thiamine pyrophosphate enzyme, central domain J172_00332 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J172_00332 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J172_00333 PF00512 His Kinase A (phospho-acceptor) domain J172_00333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00334 PF00072 Response regulator receiver domain J172_00334 PF00158 Sigma-54 interaction domain J172_00334 PF02954 Bacterial regulatory protein, Fis family J172_00337 PF07690 Major Facilitator Superfamily J172_00338 PF00588 SpoU rRNA Methylase family J172_00340 PF13698 J172_00340 J172_00341 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J172_00341 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J172_00342 PF02661 Fic/DOC family J172_00342 PF13784 Fic/DOC family N-terminal J172_00343 PF00561 alpha/beta hydrolase fold J172_00344 PF03692 J172_00344 J172_00345 PF00501 AMP-binding enzyme J172_00347 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J172_00348 PF07043 J172_00348 J172_00349 PF01820 D-ala D-ala ligase N-terminus J172_00350 PF02036 SCP-2 sterol transfer family J172_00351 PF03109 J172_00351 J172_00352 PF07883 Cupin domain J172_00353 PF00849 RNA pseudouridylate synthase J172_00354 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) J172_00355 PF00472 RF-1 domain J172_00356 PF01553 Acyltransferase J172_00357 PF01112 Asparaginase J172_00358 PF01432 Peptidase family M3 J172_00359 PF12706 Beta-lactamase superfamily domain J172_00360 PF00440 Bacterial regulatory proteins, tetR family J172_00360 PF14246 AefR-like transcriptional repressor, C-terminal region J172_00361 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_00362 PF12833 Helix-turn-helix domain J172_00363 PF00999 Sodium/hydrogen exchanger family J172_00364 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00364 PF03466 LysR substrate binding domain J172_00365 PF01274 Malate synthase J172_00366 PF00463 Isocitrate lyase family J172_00367 PF00027 Cyclic nucleotide-binding domain J172_00367 PF00990 GGDEF domain J172_00370 PF00881 Nitroreductase family J172_00372 PF00326 Prolyl oligopeptidase family J172_00373 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J172_00373 PF00364 Biotin-requiring enzyme J172_00373 PF02785 Biotin carboxylase C-terminal domain J172_00373 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J172_00374 PF01039 Carboxyl transferase domain J172_00375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_00375 PF02770 Acyl-CoA dehydrogenase, middle domain J172_00375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_00376 PF00440 Bacterial regulatory proteins, tetR family J172_00378 PF08808 J172_00378 J172_00379 PF11804 J172_00379 J172_00380 PF03929 J172_00380 J172_00381 PF12365 J172_00381 J172_00383 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J172_00384 PF03372 Endonuclease/Exonuclease/phosphatase family J172_00385 PF03203 J172_00385 J172_00386 PF02492 CobW/HypB/UreG, nucleotide-binding domain J172_00386 PF07683 Cobalamin synthesis protein cobW C-terminal domain J172_00389 PF12146 Putative lysophospholipase J172_00390 PF03969 AFG1-like ATPase J172_00391 PF01047 MarR family J172_00392 PF02566 OsmC-like protein J172_00393 PF12697 Alpha/beta hydrolase family J172_00394 PF11101 J172_00394 J172_00397 PF00107 Zinc-binding dehydrogenase J172_00397 PF16884 J172_00397 J172_00398 PF00248 Aldo/keto reductase family J172_00400 PF00849 RNA pseudouridylate synthase J172_00401 PF00593 TonB dependent receptor J172_00401 PF07715 TonB-dependent Receptor Plug Domain J172_00401 PF13620 Carboxypeptidase regulatory-like domain J172_00403 PF00271 Helicase conserved C-terminal domain J172_00403 PF04408 Helicase associated domain (HA2) J172_00403 PF08482 J172_00403 J172_00404 PF07308 J172_00404 J172_00405 PF00576 HIUase/Transthyretin family J172_00406 PF13738 Pyridine nucleotide-disulphide oxidoreductase J172_00407 PF09349 OHCU decarboxylase J172_00408 PF11533 Protein of unknown function (DUF3225) J172_00409 PF01522 Polysaccharide deacetylase J172_00410 PF00266 Aminotransferase class-V J172_00411 PF01546 Peptidase family M20/M25/M40 J172_00411 PF07687 Peptidase dimerisation domain J172_00412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00412 PF03466 LysR substrate binding domain J172_00413 PF07690 Major Facilitator Superfamily J172_00415 PF01019 Gamma-glutamyltranspeptidase J172_00416 PF01425 Amidase J172_00417 PF01156 Inosine-uridine preferring nucleoside hydrolase J172_00418 PF00962 Adenosine/AMP deaminase J172_00419 PF00860 Permease family J172_00420 PF00111 2Fe-2S iron-sulfur cluster binding domain J172_00420 PF00970 Oxidoreductase FAD-binding domain J172_00421 PF00355 Rieske [2Fe-2S] domain J172_00422 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00422 PF03466 LysR substrate binding domain J172_00423 PF01026 TatD related DNase J172_00426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00426 PF03466 LysR substrate binding domain J172_00427 PF07690 Major Facilitator Superfamily J172_00428 PF13411 MerR HTH family regulatory protein J172_00429 PF12697 Alpha/beta hydrolase family J172_00430 PF02146 Sir2 family J172_00431 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J172_00432 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J172_00432 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J172_00434 PF00551 Formyl transferase J172_00434 PF01842 ACT domain J172_00435 PF00072 Response regulator receiver domain J172_00435 PF00486 Transcriptional regulatory protein, C terminal J172_00436 PF00512 His Kinase A (phospho-acceptor) domain J172_00436 PF00672 HAMP domain J172_00436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00437 PF16576 J172_00437 J172_00438 PF00873 AcrB/AcrD/AcrF family J172_00439 PF02321 Outer membrane efflux protein J172_00441 PF02219 Methylenetetrahydrofolate reductase J172_00442 PF02677 J172_00442 J172_00443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00443 PF03466 LysR substrate binding domain J172_00444 PF03358 NADPH-dependent FMN reductase J172_00445 PF08908 J172_00445 J172_00446 PF01717 Cobalamin-independent synthase, Catalytic domain J172_00447 PF03812 J172_00447 J172_00448 PF07396 Phosphate-selective porin O and P J172_00449 PF05368 NmrA-like family J172_00450 PF01638 HxlR-like helix-turn-helix J172_00454 PF00665 Integrase core domain J172_00454 PF13276 J172_00454 J172_00455 PF01527 Transposase J172_00456 PF00589 Phage integrase family J172_00457 PF00920 Dehydratase family J172_00458 PF00150 Cellulase (glycosyl hydrolase family 5) J172_00460 PF00132 Bacterial transferase hexapeptide (six repeats) J172_00461 PF07690 Major Facilitator Superfamily J172_00462 PF11871 J172_00462 J172_00462 PF13487 HD domain J172_00463 PF12802 MarR family J172_00464 PF13557 J172_00464 J172_00465 PF00106 short chain dehydrogenase J172_00465 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00466 PF00171 Aldehyde dehydrogenase family J172_00467 PF02311 AraC-like ligand binding domain J172_00467 PF12833 Helix-turn-helix domain J172_00468 PF01494 FAD binding domain J172_00470 PF12680 SnoaL-like domain J172_00471 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J172_00471 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J172_00472 PF00230 Major intrinsic protein J172_00473 PF01266 FAD dependent oxidoreductase J172_00473 PF16901 J172_00473 J172_00474 PF00455 J172_00474 J172_00474 PF08220 DeoR-like helix-turn-helix domain J172_00475 PF00111 2Fe-2S iron-sulfur cluster binding domain J172_00475 PF00175 Oxidoreductase NAD-binding domain J172_00475 PF00970 Oxidoreductase FAD-binding domain J172_00476 PF00355 Rieske [2Fe-2S] domain J172_00477 PF01144 Coenzyme A transferase J172_00478 PF01144 Coenzyme A transferase J172_00479 PF00108 Thiolase, N-terminal domain J172_00479 PF02803 Thiolase, C-terminal domain J172_00480 PF00775 Dioxygenase J172_00480 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J172_00481 PF00775 Dioxygenase J172_00482 PF00206 Lyase J172_00482 PF10397 Adenylosuccinate lyase C-terminus J172_00483 PF00561 alpha/beta hydrolase fold J172_00484 PF02627 Carboxymuconolactone decarboxylase family J172_00485 PF12146 Putative lysophospholipase J172_00486 PF01614 Bacterial transcriptional regulator J172_00486 PF09339 IclR helix-turn-helix domain J172_00487 PF01163 RIO1 family J172_00488 PF07859 alpha/beta hydrolase fold J172_00489 PF10677 J172_00489 J172_00490 PF01134 Glucose inhibited division protein A J172_00490 PF13932 GidA associated domain 3 J172_00492 PF00291 Pyridoxal-phosphate dependent enzyme J172_00493 PF02698 DUF218 domain J172_00494 PF12680 SnoaL-like domain J172_00495 PF05118 Aspartyl/Asparaginyl beta-hydroxylase J172_00496 PF08241 Methyltransferase domain J172_00497 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00498 PF12697 Alpha/beta hydrolase family J172_00500 PF00155 Aminotransferase class I and II J172_00501 PF04055 Radical SAM superfamily J172_00501 PF06968 Biotin and Thiamin Synthesis associated domain J172_00502 PF00156 Phosphoribosyl transferase domain J172_00503 PF01040 UbiA prenyltransferase family J172_00507 PF05819 J172_00507 J172_00510 PF05932 Tir chaperone protein (CesT) family J172_00515 PF01313 J172_00515 J172_00516 PF00813 J172_00516 J172_00517 PF01052 Surface presentation of antigens (SPOA) J172_00518 PF09483 J172_00518 J172_00519 PF00771 FHIPEP family J172_00520 PF01312 FlhB HrpN YscU SpaS Family J172_00521 PF09613 J172_00521 J172_00522 PF09487 J172_00522 J172_00523 PF01514 Secretory protein of YscJ/FliF family J172_00524 PF09502 J172_00524 J172_00525 PF02108 J172_00525 J172_00526 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J172_00526 PF02874 ATP synthase alpha/beta family, beta-barrel domain J172_00527 PF09486 J172_00527 J172_00528 PF01311 J172_00528 J172_00529 PF00263 J172_00529 J172_00529 PF03958 Bacterial type II/III secretion system short domain J172_00531 PF01464 Transglycosylase SLT domain J172_00533 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J172_00534 PF00924 Mechanosensitive ion channel J172_00534 PF12607 J172_00534 J172_00535 PF00884 Sulfatase J172_00536 PF03109 J172_00536 J172_00537 PF05661 J172_00537 J172_00538 PF00990 GGDEF domain J172_00539 PF00534 Glycosyl transferases group 1 J172_00539 PF08323 Starch synthase catalytic domain J172_00540 PF00128 Alpha amylase, catalytic domain J172_00540 PF02806 Alpha amylase, C-terminal all-beta domain J172_00540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J172_00541 PF00128 Alpha amylase, catalytic domain J172_00541 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J172_00541 PF11941 Domain of unknown function (DUF3459) J172_00542 PF02446 4-alpha-glucanotransferase J172_00543 PF00128 Alpha amylase, catalytic domain J172_00544 PF11154 J172_00544 J172_00545 PF00128 Alpha amylase, catalytic domain J172_00545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J172_00546 PF13460 NADH(P)-binding J172_00547 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00548 PF00890 FAD binding domain J172_00548 PF13454 FAD-NAD(P)-binding J172_00549 PF06903 J172_00549 J172_00550 PF02321 Outer membrane efflux protein J172_00551 PF00440 Bacterial regulatory proteins, tetR family J172_00552 PF16576 J172_00552 J172_00553 PF00873 AcrB/AcrD/AcrF family J172_00554 PF00106 short chain dehydrogenase J172_00556 PF00270 DEAD/DEAH box helicase J172_00556 PF00271 Helicase conserved C-terminal domain J172_00558 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J172_00558 PF00364 Biotin-requiring enzyme J172_00558 PF02817 e3 binding domain J172_00559 PF07653 Variant SH3 domain J172_00560 PF02779 Transketolase, pyrimidine binding domain J172_00560 PF02780 Transketolase, C-terminal domain J172_00561 PF00676 Dehydrogenase E1 component J172_00562 PF00932 Lamin Tail Domain J172_00562 PF03160 Calx-beta domain J172_00562 PF03372 Endonuclease/Exonuclease/phosphatase family J172_00563 PF03301 Tryptophan 2,3-dioxygenase J172_00564 PF00854 POT family J172_00565 PF13899 Thioredoxin-like J172_00566 PF12802 MarR family J172_00567 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_00567 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal J172_00568 PF04209 homogentisate 1,2-dioxygenase J172_00571 PF03334 J172_00571 J172_00572 PF04066 J172_00572 J172_00573 PF01899 J172_00573 J172_00574 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_00575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J172_00576 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_00576 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J172_00576 PF04039 J172_00576 J172_00576 PF13244 J172_00576 J172_00577 PF01370 NAD dependent epimerase/dehydratase family J172_00578 PF06127 J172_00578 J172_00579 PF01447 Thermolysin metallopeptidase, catalytic domain J172_00579 PF02868 Thermolysin metallopeptidase, alpha-helical domain J172_00579 PF07504 Fungalysin/Thermolysin Propeptide Motif J172_00580 PF00182 Chitinase class I J172_00580 PF01471 Putative peptidoglycan binding domain J172_00580 PF01551 Peptidase family M23 J172_00584 PF01259 SAICAR synthetase J172_00585 PF00226 DnaJ domain J172_00586 PF13505 Outer membrane protein beta-barrel domain J172_00587 PF00834 Ribulose-phosphate 3 epimerase family J172_00588 PF00583 Acetyltransferase (GNAT) family J172_00589 PF00781 Diacylglycerol kinase catalytic domain J172_00590 PF00425 chorismate binding enzyme J172_00590 PF04715 Anthranilate synthase component I, N terminal region J172_00591 PF01212 Beta-eliminating lyase J172_00592 PF00117 Glutamine amidotransferase class-I J172_00593 PF01613 Flavin reductase like domain J172_00594 PF00591 Glycosyl transferase family, a/b domain J172_00594 PF02885 Glycosyl transferase family, helical bundle domain J172_00595 PF00218 Indole-3-glycerol phosphate synthase J172_00596 PF12710 haloacid dehalogenase-like hydrolase J172_00597 PF00027 Cyclic nucleotide-binding domain J172_00597 PF00325 Bacterial regulatory proteins, crp family J172_00598 PF02675 S-adenosylmethionine decarboxylase J172_00599 PF00893 Small Multidrug Resistance protein J172_00600 PF03232 J172_00600 J172_00601 PF00572 Ribosomal protein L13 J172_00602 PF00380 Ribosomal protein S9/S16 J172_00605 PF00293 NUDIX domain J172_00606 PF00210 Ferritin-like domain J172_00607 PF00072 Response regulator receiver domain J172_00607 PF00512 His Kinase A (phospho-acceptor) domain J172_00607 PF01627 Hpt domain J172_00607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00608 PF00072 Response regulator receiver domain J172_00608 PF00563 EAL domain J172_00608 PF00990 GGDEF domain J172_00609 PF13548 J172_00609 J172_00611 PF04519 J172_00611 J172_00612 PF01521 Iron-sulphur cluster biosynthesis J172_00613 PF03583 Secretory lipase J172_00614 PF01609 Transposase DDE domain J172_00615 PF00293 NUDIX domain J172_00615 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J172_00615 PF09297 NADH pyrophosphatase zinc ribbon domain J172_00616 PF03186 J172_00616 J172_00617 PF10825 J172_00617 J172_00618 PF04505 J172_00618 J172_00619 PF01553 Acyltransferase J172_00619 PF07690 Major Facilitator Superfamily J172_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00620 PF03466 LysR substrate binding domain J172_00621 PF07690 Major Facilitator Superfamily J172_00622 PF12805 J172_00622 J172_00622 PF13515 J172_00622 J172_00623 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J172_00623 PF02843 Phosphoribosylglycinamide synthetase, C domain J172_00623 PF02844 Phosphoribosylglycinamide synthetase, N domain J172_00625 PF01808 AICARFT/IMPCHase bienzyme J172_00625 PF02142 MGS-like domain J172_00626 PF01066 CDP-alcohol phosphatidyltransferase J172_00627 PF12146 Putative lysophospholipase J172_00627 PF12147 J172_00627 J172_00628 PF00782 Dual specificity phosphatase, catalytic domain J172_00628 PF14378 J172_00628 J172_00631 PF01066 CDP-alcohol phosphatidyltransferase J172_00632 PF01553 Acyltransferase J172_00633 PF01148 Cytidylyltransferase family J172_00634 PF02954 Bacterial regulatory protein, Fis family J172_00635 PF11906 J172_00635 J172_00637 PF01381 Helix-turn-helix J172_00639 PF06325 Ribosomal protein L11 methyltransferase (PrmA) J172_00642 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J172_00642 PF02785 Biotin carboxylase C-terminal domain J172_00642 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J172_00643 PF05635 23S rRNA-intervening sequence protein J172_00644 PF00364 Biotin-requiring enzyme J172_00645 PF01220 Dehydroquinase class II J172_00646 PF02683 J172_00646 J172_00646 PF11412 Disulphide bond corrector protein DsbC J172_00646 PF13899 Thioredoxin-like J172_00647 PF03091 CutA1 divalent ion tolerance protein J172_00648 PF12625 J172_00648 J172_00648 PF12833 Helix-turn-helix domain J172_00650 PF01852 START domain J172_00652 PF00106 short chain dehydrogenase J172_00653 PF00932 Lamin Tail Domain J172_00653 PF04231 Endonuclease I J172_00653 PF13205 Bacterial Ig-like domain J172_00654 PF00166 Chaperonin 10 Kd subunit J172_00655 PF00118 TCP-1/cpn60 chaperonin family J172_00657 PF00593 TonB dependent receptor J172_00657 PF07715 TonB-dependent Receptor Plug Domain J172_00658 PF00793 DAHP synthetase I family J172_00661 PF08450 SMP-30/Gluconolaconase/LRE-like region J172_00663 PF03710 Glutamate-ammonia ligase adenylyltransferase J172_00663 PF08335 GlnD PII-uridylyltransferase J172_00664 PF02592 J172_00664 J172_00665 PF00082 Subtilase family J172_00665 PF09286 Pro-kumamolisin, activation domain J172_00666 PF06258 J172_00666 J172_00667 PF00881 Nitroreductase family J172_00668 PF04264 YceI-like domain J172_00669 PF00328 Histidine phosphatase superfamily (branch 2) J172_00670 PF04954 Siderophore-interacting protein J172_00670 PF08021 Siderophore-interacting FAD-binding domain J172_00671 PF03551 Transcriptional regulator PadR-like family J172_00672 PF16957 J172_00672 J172_00673 PF06857 J172_00673 J172_00674 PF01039 Carboxyl transferase domain J172_00675 PF06833 Malonate decarboxylase gamma subunit (MdcE) J172_00676 PF10620 J172_00676 J172_00677 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J172_00679 PF00698 Acyl transferase domain J172_00680 PF03600 Citrate transporter J172_00680 PF07158 J172_00680 J172_00681 PF00392 Bacterial regulatory proteins, gntR family J172_00681 PF07729 FCD domain J172_00682 PF13419 Haloacid dehalogenase-like hydrolase J172_00683 PF01740 STAS domain J172_00684 PF13581 Histidine kinase-like ATPase domain J172_00685 PF00672 HAMP domain J172_00685 PF02743 Cache domain J172_00685 PF07228 Stage II sporulation protein E (SpoIIE) J172_00687 PF01764 Lipase (class 3) J172_00688 PF07745 Glycosyl hydrolase family 53 J172_00689 PF00456 Transketolase, thiamine diphosphate binding domain J172_00690 PF00665 Integrase core domain J172_00690 PF13276 J172_00690 J172_00691 PF01527 Transposase J172_00692 PF00106 short chain dehydrogenase J172_00693 PF12833 Helix-turn-helix domain J172_00693 PF12852 Cupin J172_00695 PF00106 short chain dehydrogenase J172_00695 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00696 PF01145 SPFH domain / Band 7 family J172_00697 PF13409 Glutathione S-transferase, N-terminal domain J172_00697 PF13410 Glutathione S-transferase, C-terminal domain J172_00698 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_00699 PF13548 J172_00699 J172_00701 PF05708 Orthopoxvirus protein of unknown function (DUF830) J172_00702 PF12823 J172_00702 J172_00703 PF00326 Prolyl oligopeptidase family J172_00703 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J172_00704 PF07759 J172_00704 J172_00705 PF00990 GGDEF domain J172_00708 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J172_00709 PF00892 EamA-like transporter family J172_00710 PF00497 Bacterial extracellular solute-binding proteins, family 3 J172_00713 PF00324 Amino acid permease J172_00715 PF01544 CorA-like Mg2+ transporter protein J172_00716 PF01987 Mitochondrial biogenesis AIM24 J172_00717 PF01204 Trehalase J172_00718 PF01904 Protein of unknown function DUF72 J172_00719 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J172_00719 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J172_00721 PF01590 GAF domain J172_00723 PF00675 Insulinase (Peptidase family M16) J172_00723 PF05193 Peptidase M16 inactive domain J172_00724 PF00990 GGDEF domain J172_00724 PF01590 GAF domain J172_00724 PF08447 PAS fold J172_00724 PF08448 PAS fold J172_00725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_00725 PF00672 HAMP domain J172_00725 PF17200 J172_00725 J172_00726 PF00150 Cellulase (glycosyl hydrolase family 5) J172_00726 PF00553 Cellulose binding domain J172_00727 PF00916 J172_00727 J172_00727 PF01740 STAS domain J172_00728 PF00990 GGDEF domain J172_00729 PF02225 PA domain J172_00729 PF04389 Peptidase family M28 J172_00731 PF13632 Glycosyl transferase family group 2 J172_00732 PF02230 Phospholipase/Carboxylesterase J172_00733 PF06580 J172_00733 J172_00734 PF00072 Response regulator receiver domain J172_00734 PF04397 LytTr DNA-binding domain J172_00735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J172_00735 PF03900 Porphobilinogen deaminase, C-terminal domain J172_00736 PF04338 Protein of unknown function, DUF481 J172_00737 PF08279 HTH domain J172_00737 PF13280 J172_00737 J172_00738 PF08212 Lipocalin-like domain J172_00740 PF00326 Prolyl oligopeptidase family J172_00740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J172_00742 PF00155 Aminotransferase class I and II J172_00743 PF00326 Prolyl oligopeptidase family J172_00743 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J172_00744 PF04304 J172_00744 J172_00745 PF13627 J172_00745 J172_00746 PF01678 Diaminopimelate epimerase J172_00747 PF04340 Protein of unknown function, DUF484 J172_00748 PF00589 Phage integrase family J172_00748 PF02899 Phage integrase, N-terminal SAM-like domain J172_00749 PF00227 Proteasome subunit J172_00750 PF00004 ATPase family associated with various cellular activities (AAA) J172_00750 PF07724 AAA domain (Cdc48 subfamily) J172_00750 PF10431 C-terminal, D2-small domain, of ClpB protein J172_00751 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J172_00752 PF13673 Acetyltransferase (GNAT) domain J172_00753 PF16576 J172_00753 J172_00754 PF07690 Major Facilitator Superfamily J172_00755 PF01209 ubiE/COQ5 methyltransferase family J172_00756 PF00990 GGDEF domain J172_00757 PF01433 Peptidase family M1 J172_00757 PF09127 Leukotriene A4 hydrolase, C-terminal J172_00759 PF00702 haloacid dehalogenase-like hydrolase J172_00760 PF13360 PQQ-like domain J172_00760 PF13570 PQQ-like domain J172_00761 PF00497 Bacterial extracellular solute-binding proteins, family 3 J172_00761 PF12796 Ankyrin repeats (3 copies) J172_00761 PF13857 Ankyrin repeats (many copies) J172_00762 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J172_00763 PF10282 Lactonase, 7-bladed beta-propeller J172_00764 PF00107 Zinc-binding dehydrogenase J172_00764 PF08240 Alcohol dehydrogenase GroES-like domain J172_00765 PF00593 TonB dependent receptor J172_00765 PF07715 TonB-dependent Receptor Plug Domain J172_00766 PF00158 Sigma-54 interaction domain J172_00766 PF01590 GAF domain J172_00766 PF02954 Bacterial regulatory protein, Fis family J172_00767 PF00294 pfkB family carbohydrate kinase J172_00768 PF06723 MreB/Mbl protein J172_00769 PF04085 rod shape-determining protein MreC J172_00770 PF04093 J172_00770 J172_00771 PF00905 Penicillin binding protein transpeptidase domain J172_00771 PF03717 Penicillin-binding Protein dimerisation domain J172_00772 PF01098 J172_00772 J172_00773 PF00295 Glycosyl hydrolases family 28 J172_00774 PF13406 Transglycosylase SLT domain J172_00775 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel J172_00775 PF05036 Sporulation related domain J172_00776 PF00768 D-alanyl-D-alanine carboxypeptidase J172_00776 PF07943 Penicillin-binding protein 5, C-terminal domain J172_00777 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) J172_00778 PF04359 Protein of unknown function (DUF493) J172_00779 PF03099 Biotin/lipoate A/B protein ligase family J172_00780 PF04055 Radical SAM superfamily J172_00780 PF16881 J172_00780 J172_00781 PF00595 PDZ domain (Also known as DHR or GLGF) J172_00781 PF03572 Peptidase family S41 J172_00781 PF11818 J172_00781 J172_00782 PF01925 J172_00782 J172_00783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00783 PF03466 LysR substrate binding domain J172_00784 PF03372 Endonuclease/Exonuclease/phosphatase family J172_00785 PF00293 NUDIX domain J172_00785 PF01467 Cytidylyltransferase J172_00786 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J172_00788 PF01555 DNA methylase J172_00789 PF10001 J172_00789 J172_00790 PF05433 J172_00790 J172_00792 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J172_00792 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J172_00793 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J172_00793 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J172_00794 PF04972 BON domain J172_00795 PF00512 His Kinase A (phospho-acceptor) domain J172_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00795 PF05227 CHASE3 domain J172_00795 PF13188 PAS domain J172_00796 PF00072 Response regulator receiver domain J172_00797 PF00072 Response regulator receiver domain J172_00797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00798 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J172_00799 PF13561 Enoyl-(Acyl carrier protein) reductase J172_00800 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase J172_00802 PF00593 TonB dependent receptor J172_00802 PF07715 TonB-dependent Receptor Plug Domain J172_00803 PF13640 2OG-Fe(II) oxygenase superfamily J172_00805 PF00593 TonB dependent receptor J172_00805 PF07715 TonB-dependent Receptor Plug Domain J172_00806 PF11356 Type IV pilus biogenesis J172_00806 PF13180 PDZ domain J172_00807 PF00263 J172_00807 J172_00807 PF03958 Bacterial type II/III secretion system short domain J172_00808 PF00437 Type II/IV secretion system protein J172_00809 PF00482 Type II secretion system (T2SS), protein F J172_00810 PF07963 Prokaryotic N-terminal methylation motif J172_00810 PF08334 Type II secretion system (T2SS), protein G J172_00811 PF07963 Prokaryotic N-terminal methylation motif J172_00811 PF12019 Type II transport protein GspH J172_00812 PF02501 Type II secretion system (T2SS), protein I J172_00813 PF07963 Prokaryotic N-terminal methylation motif J172_00813 PF11612 Type II secretion system (T2SS), protein J J172_00814 PF03934 Type II secretion system (T2SS), protein K J172_00815 PF05134 Type II secretion system (T2SS), protein L J172_00816 PF04612 Type II secretion system (T2SS), protein M J172_00817 PF01203 J172_00817 J172_00818 PF00593 TonB dependent receptor J172_00818 PF07715 TonB-dependent Receptor Plug Domain J172_00819 PF02837 Glycosyl hydrolases family 2, sugar binding domain J172_00820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J172_00820 PF16355 J172_00820 J172_00821 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain J172_00821 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain J172_00821 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain J172_00823 PF07786 J172_00823 J172_00824 PF00392 Bacterial regulatory proteins, gntR family J172_00824 PF07702 UTRA domain J172_00825 PF07690 Major Facilitator Superfamily J172_00826 PF00356 Bacterial regulatory proteins, lacI family J172_00826 PF13377 Periplasmic binding protein-like domain J172_00827 PF01380 SIS domain J172_00828 PF01979 Amidohydrolase family J172_00829 PF00593 TonB dependent receptor J172_00829 PF07715 TonB-dependent Receptor Plug Domain J172_00830 PF01743 Poly A polymerase head domain J172_00830 PF01966 HD domain J172_00830 PF12627 Probable RNA and SrmB- binding site of polymerase A J172_00831 PF00732 GMC oxidoreductase J172_00831 PF05199 GMC oxidoreductase J172_00832 PF00171 Aldehyde dehydrogenase family J172_00833 PF02028 BCCT family transporter J172_00834 PF03372 Endonuclease/Exonuclease/phosphatase family J172_00835 PF01323 DSBA-like thioredoxin domain J172_00836 PF13462 Thioredoxin J172_00838 PF00034 Cytochrome c J172_00839 PF01926 50S ribosome-binding GTPase J172_00840 PF00753 Metallo-beta-lactamase superfamily J172_00841 PF12833 Helix-turn-helix domain J172_00842 PF04107 Glutamate-cysteine ligase family 2(GCS2) J172_00843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00844 PF00072 Response regulator receiver domain J172_00844 PF00486 Transcriptional regulatory protein, C terminal J172_00845 PF00534 Glycosyl transferases group 1 J172_00847 PF02583 Metal-sensitive transcriptional repressor J172_00848 PF00107 Zinc-binding dehydrogenase J172_00848 PF08240 Alcohol dehydrogenase GroES-like domain J172_00849 PF04828 Glutathione-dependent formaldehyde-activating enzyme J172_00850 PF00756 Putative esterase J172_00851 PF00155 Aminotransferase class I and II J172_00851 PF00392 Bacterial regulatory proteins, gntR family J172_00852 PF02567 Phenazine biosynthesis-like protein J172_00853 PF00892 EamA-like transporter family J172_00855 PF00005 ABC transporter J172_00855 PF12848 ABC transporter J172_00856 PF11776 Domain of unknown function (DUF3315) J172_00857 PF00464 Serine hydroxymethyltransferase J172_00858 PF03477 ATP cone domain J172_00859 PF00583 Acetyltransferase (GNAT) family J172_00860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J172_00860 PF01872 RibD C-terminal domain J172_00863 PF00677 Lumazine binding domain J172_00864 PF00925 GTP cyclohydrolase II J172_00864 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J172_00865 PF00885 6,7-dimethyl-8-ribityllumazine synthase J172_00866 PF01029 NusB family J172_00867 PF00586 AIR synthase related protein, N-terminal domain J172_00867 PF02769 AIR synthase related protein, C-terminal domain J172_00868 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J172_00868 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J172_00869 PF00646 F-box domain J172_00870 PF09604 J172_00870 J172_00871 PF03814 J172_00871 J172_00872 PF00122 E1-E2 ATPase J172_00872 PF00702 haloacid dehalogenase-like hydrolase J172_00873 PF02669 J172_00873 J172_00874 PF00512 His Kinase A (phospho-acceptor) domain J172_00874 PF00582 Universal stress protein family J172_00874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00874 PF02702 Osmosensitive K+ channel His kinase sensor domain J172_00874 PF13493 Domain of unknown function (DUF4118) J172_00875 PF00072 Response regulator receiver domain J172_00875 PF00486 Transcriptional regulatory protein, C terminal J172_00878 PF01565 FAD binding domain J172_00878 PF02913 FAD linked oxidases, C-terminal domain J172_00879 PF04307 J172_00879 J172_00880 PF02021 Uncharacterised protein family UPF0102 J172_00881 PF04348 LppC putative lipoprotein J172_00882 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J172_00885 PF07362 Post-segregation antitoxin CcdA J172_00886 PF05742 J172_00886 J172_00887 PF02381 MraZ protein J172_00888 PF01795 MraW methylase family J172_00889 PF04999 J172_00889 J172_00890 PF00905 Penicillin binding protein transpeptidase domain J172_00890 PF03717 Penicillin-binding Protein dimerisation domain J172_00891 PF01225 Mur ligase family, catalytic domain J172_00891 PF02875 Mur ligase family, glutamate ligase domain J172_00891 PF08245 Mur ligase middle domain J172_00892 PF01225 Mur ligase family, catalytic domain J172_00892 PF02875 Mur ligase family, glutamate ligase domain J172_00892 PF08245 Mur ligase middle domain J172_00893 PF00953 Glycosyl transferase family 4 J172_00894 PF01098 J172_00894 J172_00895 PF03033 Glycosyltransferase family 28 N-terminal domain J172_00895 PF04101 Glycosyltransferase family 28 C-terminal domain J172_00896 PF01225 Mur ligase family, catalytic domain J172_00896 PF02875 Mur ligase family, glutamate ligase domain J172_00896 PF08245 Mur ligase middle domain J172_00897 PF01820 D-ala D-ala ligase N-terminus J172_00897 PF07478 D-ala D-ala ligase C-terminus J172_00898 PF03799 Cell division protein FtsQ J172_00898 PF08478 POTRA domain, FtsQ-type J172_00899 PF02491 SHS2 domain inserted in FTSA J172_00899 PF14450 Cell division protein FtsA J172_00900 PF00091 Tubulin/FtsZ family, GTPase domain J172_00900 PF12327 FtsZ family, C-terminal domain J172_00901 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J172_00902 PF05258 J172_00902 J172_00903 PF01551 Peptidase family M23 J172_00904 PF01043 SecA preprotein cross-linking domain J172_00904 PF02810 SEC-C motif J172_00904 PF07516 SecA Wing and Scaffold domain J172_00904 PF07517 SecA DEAD-like domain J172_00905 PF00293 NUDIX domain J172_00905 PF02581 Thiamine monophosphate synthase/TENI J172_00907 PF02219 Methylenetetrahydrofolate reductase J172_00908 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J172_00910 PF08240 Alcohol dehydrogenase GroES-like domain J172_00910 PF13602 Zinc-binding dehydrogenase J172_00911 PF00082 Subtilase family J172_00911 PF09286 Pro-kumamolisin, activation domain J172_00913 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J172_00914 PF00128 Alpha amylase, catalytic domain J172_00915 PF09831 J172_00915 J172_00916 PF11539 Protein of unknown function (DUF3228) J172_00919 PF00685 Sulfotransferase domain J172_00920 PF13649 Methyltransferase domain J172_00921 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J172_00921 PF05221 S-adenosyl-L-homocysteine hydrolase J172_00923 PF00326 Prolyl oligopeptidase family J172_00924 PF00311 Phosphoenolpyruvate carboxylase J172_00925 PF00440 Bacterial regulatory proteins, tetR family J172_00926 PF13387 J172_00926 J172_00928 PF00593 TonB dependent receptor J172_00928 PF07715 TonB-dependent Receptor Plug Domain J172_00929 PF00328 Histidine phosphatase superfamily (branch 2) J172_00930 PF00438 S-adenosylmethionine synthetase, N-terminal domain J172_00930 PF02772 S-adenosylmethionine synthetase, central domain J172_00930 PF02773 S-adenosylmethionine synthetase, C-terminal domain J172_00931 PF04307 J172_00931 J172_00932 PF08241 Methyltransferase domain J172_00933 PF01207 Dihydrouridine synthase (Dus) J172_00934 PF08306 Glycosyl hydrolase family 98 J172_00934 PF08307 Glycosyl hydrolase family 98 C-terminal domain J172_00934 PF16990 J172_00934 J172_00936 PF00294 pfkB family carbohydrate kinase J172_00937 PF01773 Na+ dependent nucleoside transporter N-terminus J172_00937 PF07662 Na+ dependent nucleoside transporter C-terminus J172_00937 PF07670 Nucleoside recognition J172_00938 PF00248 Aldo/keto reductase family J172_00939 PF10636 Hemin uptake protein hemP J172_00940 PF00593 TonB dependent receptor J172_00940 PF07715 TonB-dependent Receptor Plug Domain J172_00944 PF04342 J172_00944 J172_00945 PF00528 Binding-protein-dependent transport system inner membrane component J172_00946 PF00005 ABC transporter J172_00947 PF13379 NMT1-like family J172_00948 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J172_00949 PF02687 J172_00949 J172_00950 PF00005 ABC transporter J172_00951 PF13472 GDSL-like Lipase/Acylhydrolase family J172_00952 PF00072 Response regulator receiver domain J172_00952 PF00486 Transcriptional regulatory protein, C terminal J172_00953 PF00512 His Kinase A (phospho-acceptor) domain J172_00953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_00954 PF13472 GDSL-like Lipase/Acylhydrolase family J172_00955 PF01219 Prokaryotic diacylglycerol kinase J172_00956 PF04011 LemA family J172_00957 PF04536 TLP18 J172_00958 PF04536 TLP18 J172_00959 PF01790 J172_00959 J172_00960 PF00303 Thymidylate synthase J172_00962 PF00186 Dihydrofolate reductase J172_00963 PF00158 Sigma-54 interaction domain J172_00964 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_00964 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J172_00965 PF00005 ABC transporter J172_00966 PF00528 Binding-protein-dependent transport system inner membrane component J172_00967 PF09084 NMT1/THI5 like J172_00968 PF00296 Luciferase-like monooxygenase J172_00969 PF03358 NADPH-dependent FMN reductase J172_00970 PF00593 TonB dependent receptor J172_00970 PF07715 TonB-dependent Receptor Plug Domain J172_00972 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J172_00973 PF00296 Luciferase-like monooxygenase J172_00974 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J172_00975 PF00528 Binding-protein-dependent transport system inner membrane component J172_00976 PF00528 Binding-protein-dependent transport system inner membrane component J172_00978 PF00005 ABC transporter J172_00978 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J172_00979 PF00149 Calcineurin-like phosphoesterase J172_00980 PF04379 Protein of unknown function (DUF525) J172_00981 PF00398 Ribosomal RNA adenine dimethylase J172_00982 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J172_00983 PF00639 PPIC-type PPIASE domain J172_00983 PF09312 SurA N-terminal domain J172_00983 PF13616 PPIC-type PPIASE domain J172_00984 PF03968 OstA-like protein J172_00984 PF04453 Organic solvent tolerance protein J172_00985 PF00850 Histone deacetylase domain J172_00986 PF01453 D-mannose binding lectin J172_00987 PF00850 Histone deacetylase domain J172_00988 PF01923 Cobalamin adenosyltransferase J172_00990 PF01494 FAD binding domain J172_00991 PF01494 FAD binding domain J172_00992 PF12697 Alpha/beta hydrolase family J172_00993 PF13577 SnoaL-like domain J172_00994 PF13557 J172_00994 J172_00995 PF00392 Bacterial regulatory proteins, gntR family J172_00995 PF07729 FCD domain J172_00996 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J172_00997 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J172_00998 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_00998 PF03466 LysR substrate binding domain J172_00999 PF00501 AMP-binding enzyme J172_00999 PF13193 AMP-binding enzyme C-terminal domain J172_01000 PF00171 Aldehyde dehydrogenase family J172_01001 PF00378 Enoyl-CoA hydratase/isomerase family J172_01002 PF12802 MarR family J172_01003 PF13202 EF hand J172_01005 PF08450 SMP-30/Gluconolaconase/LRE-like region J172_01006 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J172_01007 PF01728 FtsJ-like methyltransferase J172_01008 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J172_01011 PF00749 tRNA synthetases class I (E and Q), catalytic domain J172_01011 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J172_01012 PF13409 Glutathione S-transferase, N-terminal domain J172_01013 PF09413 Domain of unknown function (DUF2007) J172_01014 PF00072 Response regulator receiver domain J172_01015 PF00072 Response regulator receiver domain J172_01015 PF00512 His Kinase A (phospho-acceptor) domain J172_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01015 PF05227 CHASE3 domain J172_01016 PF00196 Bacterial regulatory proteins, luxR family J172_01017 PF08332 Calcium/calmodulin dependent protein kinase II Association J172_01018 PF01625 Peptide methionine sulfoxide reductase J172_01019 PF01965 DJ-1/PfpI family J172_01020 PF00923 Transaldolase J172_01021 PF01272 Transcription elongation factor, GreA/GreB, C-term J172_01021 PF14760 Rnk N-terminus J172_01022 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01022 PF03466 LysR substrate binding domain J172_01023 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_01023 PF13192 Thioredoxin domain J172_01024 PF00578 AhpC/TSA family J172_01024 PF10417 C-terminal domain of 1-Cys peroxiredoxin J172_01025 PF05175 Methyltransferase small domain J172_01026 PF00561 alpha/beta hydrolase fold J172_01027 PF05013 N-formylglutamate amidohydrolase J172_01028 PF00293 NUDIX domain J172_01029 PF01367 5'-3' exonuclease, C-terminal SAM fold J172_01029 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J172_01030 PF00881 Nitroreductase family J172_01031 PF07793 J172_01031 J172_01032 PF07793 J172_01032 J172_01033 PF12146 Putative lysophospholipase J172_01034 PF00440 Bacterial regulatory proteins, tetR family J172_01034 PF13305 WHG domain J172_01035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J172_01035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J172_01036 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J172_01037 PF11304 J172_01037 J172_01039 PF04542 Sigma-70 region 2 J172_01039 PF08281 Sigma-70, region 4 J172_01040 PF12769 Domain of unknown function (DUF3814) J172_01041 PF02233 NAD(P) transhydrogenase beta subunit J172_01043 PF01883 Domain of unknown function DUF59 J172_01044 PF01063 Aminotransferase class IV J172_01045 PF00082 Subtilase family J172_01045 PF04151 Bacterial pre-peptidase C-terminal domain J172_01046 PF00082 Subtilase family J172_01047 PF00082 Subtilase family J172_01047 PF04151 Bacterial pre-peptidase C-terminal domain J172_01048 PF04073 Aminoacyl-tRNA editing domain J172_01049 PF00710 Asparaginase J172_01050 PF02055 O-Glycosyl hydrolase family 30 J172_01051 PF17189 J172_01051 J172_01052 PF09842 J172_01052 J172_01053 PF03358 NADPH-dependent FMN reductase J172_01054 PF03631 J172_01054 J172_01055 PF00578 AhpC/TSA family J172_01056 PF00708 Acylphosphatase J172_01058 PF03976 Polyphosphate kinase 2 (PPK2) J172_01059 PF00994 Probable molybdopterin binding domain J172_01060 PF13844 Glycosyl transferase family 41 J172_01060 PF14559 Tetratricopeptide repeat J172_01061 PF00472 RF-1 domain J172_01061 PF03462 PCRF domain J172_01062 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J172_01062 PF01488 Shikimate / quinate 5-dehydrogenase J172_01062 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J172_01063 PF13429 Tetratricopeptide repeat J172_01064 PF03550 Outer membrane lipoprotein LolB J172_01065 PF00288 GHMP kinases N terminal domain J172_01065 PF08544 GHMP kinases C terminal J172_01067 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J172_01067 PF14572 Phosphoribosyl synthetase-associated domain J172_01068 PF01386 Ribosomal L25p family J172_01068 PF14693 Ribosomal protein TL5, C-terminal domain J172_01069 PF01195 Peptidyl-tRNA hydrolase J172_01070 PF01926 50S ribosome-binding GTPase J172_01070 PF06071 Protein of unknown function (DUF933) J172_01074 PF00009 Elongation factor Tu GTP binding domain J172_01074 PF03143 Elongation factor Tu C-terminal domain J172_01074 PF03144 Elongation factor Tu domain 2 J172_01076 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J172_01077 PF00467 KOW motif J172_01077 PF02357 Transcription termination factor nusG J172_01078 PF00298 Ribosomal protein L11, RNA binding domain J172_01078 PF03946 Ribosomal protein L11, N-terminal domain J172_01079 PF00687 Ribosomal protein L1p/L10e family J172_01080 PF00466 Ribosomal protein L10 J172_01081 PF00542 Ribosomal protein L7/L12 C-terminal domain J172_01081 PF16320 J172_01081 J172_01083 PF00562 RNA polymerase Rpb2, domain 6 J172_01083 PF04560 RNA polymerase Rpb2, domain 7 J172_01083 PF04561 RNA polymerase Rpb2, domain 2 J172_01083 PF04563 RNA polymerase beta subunit J172_01083 PF04565 RNA polymerase Rpb2, domain 3 J172_01083 PF10385 RNA polymerase beta subunit external 1 domain J172_01084 PF00623 RNA polymerase Rpb1, domain 2 J172_01084 PF04983 RNA polymerase Rpb1, domain 3 J172_01084 PF04997 RNA polymerase Rpb1, domain 1 J172_01084 PF04998 RNA polymerase Rpb1, domain 5 J172_01084 PF05000 RNA polymerase Rpb1, domain 4 J172_01085 PF00164 Ribosomal protein S12/S23 J172_01086 PF00177 Ribosomal protein S7p/S5e J172_01087 PF00009 Elongation factor Tu GTP binding domain J172_01087 PF00679 Elongation factor G C-terminus J172_01087 PF03144 Elongation factor Tu domain 2 J172_01087 PF03764 Elongation factor G, domain IV J172_01087 PF14492 Elongation Factor G, domain II J172_01088 PF00009 Elongation factor Tu GTP binding domain J172_01088 PF03143 Elongation factor Tu C-terminal domain J172_01088 PF03144 Elongation factor Tu domain 2 J172_01089 PF00338 Ribosomal protein S10p/S20e J172_01090 PF00297 Ribosomal protein L3 J172_01091 PF00573 Ribosomal protein L4/L1 family J172_01092 PF00276 Ribosomal protein L23 J172_01093 PF00181 Ribosomal Proteins L2, RNA binding domain J172_01093 PF03947 Ribosomal Proteins L2, C-terminal domain J172_01094 PF00203 Ribosomal protein S19 J172_01095 PF00237 Ribosomal protein L22p/L17e J172_01096 PF00189 Ribosomal protein S3, C-terminal domain J172_01096 PF07650 KH domain J172_01097 PF00252 Ribosomal protein L16p/L10e J172_01098 PF00831 Ribosomal L29 protein J172_01099 PF00366 Ribosomal protein S17 J172_01100 PF00238 Ribosomal protein L14p/L23e J172_01101 PF00467 KOW motif J172_01101 PF17136 J172_01101 J172_01102 PF00281 Ribosomal protein L5 J172_01102 PF00673 ribosomal L5P family C-terminus J172_01103 PF00253 Ribosomal protein S14p/S29e J172_01104 PF00410 Ribosomal protein S8 J172_01105 PF00347 Ribosomal protein L6 J172_01106 PF00861 Ribosomal L18p/L5e family J172_01107 PF00333 Ribosomal protein S5, N-terminal domain J172_01107 PF03719 Ribosomal protein S5, C-terminal domain J172_01108 PF00327 Ribosomal protein L30p/L7e J172_01109 PF00828 Ribosomal protein L18e/L15 J172_01110 PF00344 SecY translocase J172_01111 PF00416 Ribosomal protein S13/S18 J172_01112 PF00411 Ribosomal protein S11 J172_01113 PF00163 Ribosomal protein S4/S9 N-terminal domain J172_01113 PF01479 S4 domain J172_01114 PF01000 RNA polymerase Rpb3/RpoA insert domain J172_01114 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J172_01114 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J172_01115 PF01196 Ribosomal protein L17 J172_01116 PF02600 Disulfide bond formation protein DsbB J172_01117 PF00593 TonB dependent receptor J172_01117 PF07715 TonB-dependent Receptor Plug Domain J172_01118 PF01474 Class-II DAHP synthetase family J172_01119 PF00924 Mechanosensitive ion channel J172_01120 PF01425 Amidase J172_01121 PF09900 J172_01121 J172_01122 PF00009 Elongation factor Tu GTP binding domain J172_01122 PF00679 Elongation factor G C-terminus J172_01122 PF03144 Elongation factor Tu domain 2 J172_01123 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J172_01124 PF00056 lactate/malate dehydrogenase, NAD binding domain J172_01124 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J172_01125 PF00043 Glutathione S-transferase, C-terminal domain J172_01125 PF02798 Glutathione S-transferase, N-terminal domain J172_01126 PF07486 Cell Wall Hydrolase J172_01127 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J172_01127 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_01128 PF08240 Alcohol dehydrogenase GroES-like domain J172_01128 PF13602 Zinc-binding dehydrogenase J172_01129 PF00691 OmpA family J172_01129 PF13505 Outer membrane protein beta-barrel domain J172_01131 PF00849 RNA pseudouridylate synthase J172_01131 PF01479 S4 domain J172_01133 PF00155 Aminotransferase class I and II J172_01134 PF13531 Bacterial extracellular solute-binding protein J172_01135 PF00528 Binding-protein-dependent transport system inner membrane component J172_01136 PF00528 Binding-protein-dependent transport system inner membrane component J172_01137 PF00005 ABC transporter J172_01137 PF12857 J172_01137 J172_01138 PF09694 J172_01138 J172_01139 PF00107 Zinc-binding dehydrogenase J172_01139 PF08240 Alcohol dehydrogenase GroES-like domain J172_01140 PF00593 TonB dependent receptor J172_01140 PF07715 TonB-dependent Receptor Plug Domain J172_01141 PF04185 Phosphoesterase family J172_01141 PF05506 J172_01141 J172_01142 PF10459 Peptidase S46 J172_01143 PF10459 Peptidase S46 J172_01144 PF00300 Histidine phosphatase superfamily (branch 1) J172_01145 PF08245 Mur ligase middle domain J172_01146 PF05036 Sporulation related domain J172_01147 PF02674 J172_01147 J172_01148 PF13522 Glutamine amidotransferase domain J172_01149 PF04305 J172_01149 J172_01151 PF13688 Metallo-peptidase family M12 J172_01153 PF00149 Calcineurin-like phosphoesterase J172_01155 PF01569 PAP2 superfamily J172_01156 PF00534 Glycosyl transferases group 1 J172_01156 PF13439 Glycosyltransferase Family 4 J172_01157 PF02541 Ppx/GppA phosphatase family J172_01158 PF02503 Polyphosphate kinase middle domain J172_01158 PF13089 Polyphosphate kinase N-terminal domain J172_01158 PF13090 Polyphosphate kinase C-terminal domain J172_01159 PF00512 His Kinase A (phospho-acceptor) domain J172_01159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01159 PF11808 J172_01159 J172_01160 PF00072 Response regulator receiver domain J172_01160 PF00486 Transcriptional regulatory protein, C terminal J172_01161 PF01435 Peptidase family M48 J172_01162 PF00462 Glutaredoxin J172_01163 PF02627 Carboxymuconolactone decarboxylase family J172_01164 PF00180 Isocitrate/isopropylmalate dehydrogenase J172_01165 PF12811 J172_01165 J172_01170 PF00665 Integrase core domain J172_01170 PF13276 J172_01170 J172_01171 PF01527 Transposase J172_01178 PF07275 Antirestriction protein (ArdA) J172_01185 PF00959 Phage lysozyme J172_01190 PF04550 J172_01190 J172_01194 PF01527 Transposase J172_01195 PF00665 Integrase core domain J172_01195 PF13276 J172_01195 J172_01196 PF14700 DNA-directed RNA polymerase N-terminal J172_01198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01199 PF08448 PAS fold J172_01201 PF05697 Bacterial trigger factor protein (TF) J172_01201 PF05698 Bacterial trigger factor protein (TF) C-terminus J172_01202 PF00574 Clp protease J172_01203 PF06689 ClpX C4-type zinc finger J172_01203 PF07724 AAA domain (Cdc48 subfamily) J172_01203 PF10431 C-terminal, D2-small domain, of ClpB protein J172_01204 PF00004 ATPase family associated with various cellular activities (AAA) J172_01204 PF02190 ATP-dependent protease La (LON) domain J172_01204 PF05362 Lon protease (S16) C-terminal proteolytic domain J172_01205 PF00216 Bacterial DNA-binding protein J172_01209 PF13145 PPIC-type PPIASE domain J172_01209 PF13616 PPIC-type PPIASE domain J172_01209 PF13623 J172_01209 J172_01211 PF01464 Transglycosylase SLT domain J172_01211 PF01476 LysM domain J172_01212 PF00753 Metallo-beta-lactamase superfamily J172_01212 PF16123 J172_01212 J172_01214 PF00075 RNase H J172_01215 PF00929 Exonuclease J172_01216 PF13672 Protein phosphatase 2C J172_01219 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J172_01220 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family J172_01221 PF12706 Beta-lactamase superfamily domain J172_01222 PF04055 Radical SAM superfamily J172_01222 PF06463 Molybdenum Cofactor Synthesis C J172_01222 PF13353 4Fe-4S single cluster domain J172_01223 PF01967 MoaC family J172_01224 PF02597 ThiS family J172_01225 PF02391 MoaE protein J172_01227 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01228 PF01527 Transposase J172_01229 PF00665 Integrase core domain J172_01229 PF13276 J172_01229 J172_01230 PF03389 MobA/MobL family J172_01233 PF00589 Phage integrase family J172_01235 PF12169 DNA polymerase III subunits gamma and tau domain III J172_01235 PF12170 DNA polymerase III tau subunit V interacting with alpha J172_01235 PF13177 DNA polymerase III, delta subunit J172_01236 PF02575 YbaB/EbfC DNA-binding family J172_01237 PF02132 RecR protein J172_01237 PF13662 Toprim domain J172_01238 PF01230 HIT domain J172_01239 PF03843 J172_01239 J172_01240 PF01841 Transglutaminase-like superfamily J172_01240 PF11992 J172_01240 J172_01241 PF01882 J172_01241 J172_01242 PF07726 ATPase family associated with various cellular activities (AAA) J172_01243 PF13231 J172_01243 J172_01246 PF02545 Maf-like protein J172_01247 PF02620 J172_01247 J172_01248 PF01783 Ribosomal L32p protein family J172_01249 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J172_01249 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J172_01250 PF08670 J172_01250 J172_01251 PF00698 Acyl transferase domain J172_01252 PF13561 Enoyl-(Acyl carrier protein) reductase J172_01253 PF00550 Phosphopantetheine attachment site J172_01254 PF00109 Beta-ketoacyl synthase, N-terminal domain J172_01254 PF02801 Beta-ketoacyl synthase, C-terminal domain J172_01255 PF00425 chorismate binding enzyme J172_01256 PF02618 YceG-like family J172_01257 PF13177 DNA polymerase III, delta subunit J172_01258 PF07238 PilZ domain J172_01261 PF00158 Sigma-54 interaction domain J172_01261 PF02954 Bacterial regulatory protein, Fis family J172_01261 PF06506 Propionate catabolism activator J172_01262 PF13714 Phosphoenolpyruvate phosphomutase J172_01263 PF00285 Citrate synthase J172_01264 PF00330 Aconitase family (aconitate hydratase) J172_01264 PF00694 Aconitase C-terminal domain J172_01265 PF03693 Uncharacterised protein family (UPF0156) J172_01266 PF05016 Plasmid stabilisation system protein J172_01267 PF04303 PrpF protein J172_01268 PF00593 TonB dependent receptor J172_01268 PF07715 TonB-dependent Receptor Plug Domain J172_01269 PF01156 Inosine-uridine preferring nucleoside hydrolase J172_01270 PF00207 Alpha-2-macroglobulin family J172_01270 PF01835 MG2 domain J172_01270 PF07703 Alpha-2-macroglobulin family N-terminal region J172_01270 PF11974 Alpha-2-macroglobulin MG1 domain J172_01271 PF00593 TonB dependent receptor J172_01271 PF07715 TonB-dependent Receptor Plug Domain J172_01272 PF03009 Glycerophosphoryl diester phosphodiesterase family J172_01272 PF16387 J172_01272 J172_01273 PF00905 Penicillin binding protein transpeptidase domain J172_01273 PF00912 Transglycosylase J172_01273 PF06832 J172_01273 J172_01274 PF00210 Ferritin-like domain J172_01275 PF08534 Redoxin J172_01276 PF00011 Hsp20/alpha crystallin family J172_01277 PF00226 DnaJ domain J172_01277 PF01556 DnaJ C terminal domain J172_01279 PF00072 Response regulator receiver domain J172_01281 PF01145 SPFH domain / Band 7 family J172_01282 PF01145 SPFH domain / Band 7 family J172_01283 PF01797 Transposase IS200 like J172_01284 PF00709 Adenylosuccinate synthetase J172_01285 PF01433 Peptidase family M1 J172_01285 PF11838 ERAP1-like C-terminal domain J172_01287 PF13561 Enoyl-(Acyl carrier protein) reductase J172_01288 PF00440 Bacterial regulatory proteins, tetR family J172_01297 PF00069 Protein kinase domain J172_01299 PF00440 Bacterial regulatory proteins, tetR family J172_01301 PF00300 Histidine phosphatase superfamily (branch 1) J172_01302 PF01256 Carbohydrate kinase J172_01303 PF02055 O-Glycosyl hydrolase family 30 J172_01303 PF17189 J172_01303 J172_01304 PF00723 Glycosyl hydrolases family 15 J172_01305 PF13561 Enoyl-(Acyl carrier protein) reductase J172_01306 PF07971 Glycosyl hydrolase family 92 J172_01308 PF00106 short chain dehydrogenase J172_01309 PF13532 2OG-Fe(II) oxygenase superfamily J172_01310 PF00027 Cyclic nucleotide-binding domain J172_01310 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_01311 PF02148 Zn-finger in ubiquitin-hydrolases and other protein J172_01312 PF00563 EAL domain J172_01313 PF13328 HD domain J172_01314 PF00005 ABC transporter J172_01315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J172_01315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J172_01316 PF00941 FAD binding domain in molybdopterin dehydrogenase J172_01316 PF03450 CO dehydrogenase flavoprotein C-terminal domain J172_01317 PF00111 2Fe-2S iron-sulfur cluster binding domain J172_01317 PF01799 [2Fe-2S] binding domain J172_01318 PF05559 J172_01318 J172_01320 PF07883 Cupin domain J172_01322 PF02661 Fic/DOC family J172_01323 PF04014 Antidote-toxin recognition MazE J172_01324 PF00717 Peptidase S24-like J172_01324 PF01726 LexA DNA binding domain J172_01326 PF00817 impB/mucB/samB family J172_01327 PF02811 PHP domain J172_01327 PF07733 Bacterial DNA polymerase III alpha subunit J172_01327 PF14579 Helix-hairpin-helix motif J172_01328 PF00326 Prolyl oligopeptidase family J172_01329 PF08668 HDOD domain J172_01330 PF03169 J172_01330 J172_01331 PF13557 J172_01331 J172_01333 PF00326 Prolyl oligopeptidase family J172_01333 PF07676 WD40-like Beta Propeller Repeat J172_01336 PF08448 PAS fold J172_01336 PF12833 Helix-turn-helix domain J172_01341 PF00199 Catalase J172_01341 PF06628 Catalase-related immune-responsive J172_01342 PF00248 Aldo/keto reductase family J172_01343 PF00135 Carboxylesterase family J172_01344 PF02347 Glycine cleavage system P-protein J172_01347 PF07690 Major Facilitator Superfamily J172_01349 PF01401 Angiotensin-converting enzyme J172_01350 PF00884 Sulfatase J172_01350 PF08019 J172_01350 J172_01351 PF01569 PAP2 superfamily J172_01352 PF13231 J172_01352 J172_01353 PF00072 Response regulator receiver domain J172_01353 PF00486 Transcriptional regulatory protein, C terminal J172_01354 PF00512 His Kinase A (phospho-acceptor) domain J172_01354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01356 PF03776 Septum formation topological specificity factor MinE J172_01357 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_01358 PF03775 Septum formation inhibitor MinC, C-terminal domain J172_01358 PF05209 Septum formation inhibitor MinC, N-terminal domain J172_01359 PF00583 Acetyltransferase (GNAT) family J172_01360 PF07730 Histidine kinase J172_01361 PF00072 Response regulator receiver domain J172_01361 PF00196 Bacterial regulatory proteins, luxR family J172_01362 PF10604 Polyketide cyclase / dehydrase and lipid transport J172_01363 PF04241 J172_01363 J172_01364 PF00730 HhH-GPD superfamily base excision DNA repair protein J172_01365 PF02557 D-alanyl-D-alanine carboxypeptidase J172_01368 PF01145 SPFH domain / Band 7 family J172_01369 PF02222 ATP-grasp domain J172_01370 PF03372 Endonuclease/Exonuclease/phosphatase family J172_01371 PF04376 J172_01371 J172_01371 PF04377 J172_01371 J172_01372 PF13202 EF hand J172_01372 PF13499 EF-hand domain pair J172_01375 PF09413 Domain of unknown function (DUF2007) J172_01376 PF13622 Thioesterase-like superfamily J172_01377 PF00378 Enoyl-CoA hydratase/isomerase family J172_01378 PF04314 Protein of unknown function (DUF461) J172_01379 PF13279 Thioesterase-like superfamily J172_01380 PF00005 ABC transporter J172_01381 PF00829 Ribosomal prokaryotic L21 protein J172_01382 PF01016 Ribosomal L27 protein J172_01383 PF01018 GTP1/OBG J172_01383 PF01926 50S ribosome-binding GTPase J172_01384 PF01649 Ribosomal protein S20 J172_01385 PF03023 J172_01385 J172_01386 PF01687 Riboflavin kinase J172_01386 PF06574 FAD synthetase J172_01387 PF00133 tRNA synthetases class I (I, L, M and V) J172_01387 PF06827 Zinc finger found in FPG and IleRS J172_01387 PF08264 Anticodon-binding domain of tRNA J172_01388 PF01252 J172_01388 J172_01389 PF02401 LytB protein J172_01391 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J172_01391 PF06481 COX Aromatic Rich Motif J172_01392 PF00115 Cytochrome C and Quinol oxidase polypeptide I J172_01393 PF00510 Cytochrome c oxidase subunit III J172_01394 PF03626 J172_01394 J172_01395 PF05299 M61 glycyl aminopeptidase J172_01395 PF07720 Tetratricopeptide repeat J172_01396 PF13481 AAA domain J172_01396 PF13541 Subunit ChlI of Mg-chelatase J172_01397 PF05656 J172_01397 J172_01398 PF00486 Transcriptional regulatory protein, C terminal J172_01399 PF12833 Helix-turn-helix domain J172_01400 PF00183 Hsp90 protein J172_01400 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01402 PF01740 STAS domain J172_01402 PF14361 J172_01402 J172_01404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01405 PF07228 Stage II sporulation protein E (SpoIIE) J172_01405 PF13581 Histidine kinase-like ATPase domain J172_01406 PF00512 His Kinase A (phospho-acceptor) domain J172_01406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01407 PF00072 Response regulator receiver domain J172_01407 PF00512 His Kinase A (phospho-acceptor) domain J172_01407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01407 PF08448 PAS fold J172_01408 PF04616 Glycosyl hydrolases family 43 J172_01409 PF00593 TonB dependent receptor J172_01409 PF07715 TonB-dependent Receptor Plug Domain J172_01410 PF00085 Thioredoxin J172_01411 PF07237 Protein of unknown function (DUF1428) J172_01412 PF00072 Response regulator receiver domain J172_01412 PF00512 His Kinase A (phospho-acceptor) domain J172_01412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01413 PF01339 CheB methylesterase J172_01414 PF01739 CheR methyltransferase, SAM binding domain J172_01414 PF03705 CheR methyltransferase, all-alpha domain J172_01415 PF00072 Response regulator receiver domain J172_01415 PF00512 His Kinase A (phospho-acceptor) domain J172_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01415 PF13185 GAF domain J172_01416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01416 PF13426 PAS domain J172_01417 PF00072 Response regulator receiver domain J172_01418 PF00722 Glycosyl hydrolases family 16 J172_01419 PF06964 Alpha-L-arabinofuranosidase C-terminus J172_01420 PF01263 Aldose 1-epimerase J172_01421 PF01578 J172_01421 J172_01422 PF00448 SRP54-type protein, GTPase domain J172_01422 PF02881 SRP54-type protein, helical bundle domain J172_01422 PF02978 Signal peptide binding domain J172_01423 PF03060 Nitronate monooxygenase J172_01424 PF01063 Aminotransferase class IV J172_01425 PF00886 Ribosomal protein S16 J172_01426 PF01782 RimM N-terminal domain J172_01426 PF05239 PRC-barrel domain J172_01427 PF01746 tRNA (Guanine-1)-methyltransferase J172_01428 PF01245 Ribosomal protein L19 J172_01429 PF01554 MatE J172_01430 PF01554 MatE J172_01431 PF08279 HTH domain J172_01431 PF13280 J172_01431 J172_01432 PF00043 Glutathione S-transferase, C-terminal domain J172_01432 PF13417 Glutathione S-transferase, N-terminal domain J172_01433 PF01479 S4 domain J172_01434 PF00141 Peroxidase J172_01435 PF06078 Bacterial protein of unknown function (DUF937) J172_01436 PF00488 MutS domain V J172_01436 PF01624 MutS domain I J172_01436 PF05188 MutS domain II J172_01436 PF05190 MutS family domain IV J172_01436 PF05192 MutS domain III J172_01438 PF05593 J172_01438 J172_01440 PF14085 J172_01440 J172_01441 PF00754 F5/8 type C domain J172_01441 PF01120 Alpha-L-fucosidase J172_01443 PF00703 Glycosyl hydrolases family 2 J172_01443 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J172_01443 PF02837 Glycosyl hydrolases family 2, sugar binding domain J172_01443 PF16355 J172_01443 J172_01444 PF07745 Glycosyl hydrolase family 53 J172_01445 PF00593 TonB dependent receptor J172_01445 PF07715 TonB-dependent Receptor Plug Domain J172_01446 PF06114 Domain of unknown function (DUF955) J172_01446 PF09856 J172_01446 J172_01446 PF13560 Helix-turn-helix domain J172_01447 PF00171 Aldehyde dehydrogenase family J172_01448 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_01448 PF02770 Acyl-CoA dehydrogenase, middle domain J172_01448 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_01449 PF00378 Enoyl-CoA hydratase/isomerase family J172_01450 PF16113 J172_01450 J172_01451 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J172_01451 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J172_01452 PF01545 Cation efflux family J172_01453 PF00378 Enoyl-CoA hydratase/isomerase family J172_01453 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J172_01453 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J172_01454 PF04542 Sigma-70 region 2 J172_01454 PF08281 Sigma-70, region 4 J172_01455 PF03872 Anti sigma-E protein RseA, N-terminal domain J172_01456 PF13180 PDZ domain J172_01456 PF13365 Trypsin-like peptidase domain J172_01457 PF00009 Elongation factor Tu GTP binding domain J172_01457 PF00679 Elongation factor G C-terminus J172_01457 PF03144 Elongation factor Tu domain 2 J172_01457 PF06421 GTP-binding protein LepA C-terminus J172_01458 PF00717 Peptidase S24-like J172_01459 PF16137 J172_01459 J172_01460 PF00035 Double-stranded RNA binding motif J172_01460 PF14622 Ribonuclease-III-like J172_01461 PF01926 50S ribosome-binding GTPase J172_01461 PF07650 KH domain J172_01462 PF02565 Recombination protein O C terminal J172_01462 PF11967 Recombination protein O N terminal J172_01463 PF00072 Response regulator receiver domain J172_01463 PF01627 Hpt domain J172_01464 PF05958 tRNA (Uracil-5-)-methyltransferase J172_01465 PF01928 CYTH domain J172_01466 PF01323 DSBA-like thioredoxin domain J172_01467 PF13450 NAD(P)-binding Rossmann-like domain J172_01468 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J172_01469 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_01470 PF00156 Phosphoribosyl transferase domain J172_01471 PF01048 Phosphorylase superfamily J172_01472 PF00313 'Cold-shock' DNA-binding domain J172_01473 PF01494 FAD binding domain J172_01474 PF00149 Calcineurin-like phosphoesterase J172_01475 PF00270 DEAD/DEAH box helicase J172_01475 PF00271 Helicase conserved C-terminal domain J172_01475 PF08494 J172_01475 J172_01476 PF01068 ATP dependent DNA ligase domain J172_01476 PF04675 DNA ligase N terminus J172_01476 PF04679 ATP dependent DNA ligase C terminal region J172_01480 PF04519 J172_01480 J172_01481 PF00990 GGDEF domain J172_01481 PF05227 CHASE3 domain J172_01481 PF13185 GAF domain J172_01484 PF00108 Thiolase, N-terminal domain J172_01484 PF02803 Thiolase, C-terminal domain J172_01485 PF00082 Subtilase family J172_01485 PF03797 Autotransporter beta-domain J172_01485 PF12951 J172_01485 J172_01486 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J172_01486 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J172_01487 PF13640 2OG-Fe(II) oxygenase superfamily J172_01488 PF01863 Protein of unknown function DUF45 J172_01489 PF07043 J172_01489 J172_01490 PF10982 Protein of unknown function (DUF2789) J172_01491 PF01258 Prokaryotic dksA/traR C4-type zinc finger J172_01492 PF00924 Mechanosensitive ion channel J172_01494 PF06723 MreB/Mbl protein J172_01495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J172_01496 PF01545 Cation efflux family J172_01497 PF03831 PhnA protein J172_01497 PF08274 PhnA Zinc-Ribbon J172_01498 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J172_01499 PF07690 Major Facilitator Superfamily J172_01501 PF09537 Domain of unknown function (DUF2383) J172_01502 PF13563 2'-5' RNA ligase superfamily J172_01504 PF09791 J172_01504 J172_01505 PF06057 Bacterial virulence protein (VirJ) J172_01506 PF03706 J172_01506 J172_01506 PF09924 Uncharacterized conserved protein (DUF2156) J172_01508 PF06197 J172_01508 J172_01509 PF01042 Endoribonuclease L-PSP J172_01510 PF02353 Mycolic acid cyclopropane synthetase J172_01511 PF06966 J172_01511 J172_01512 PF11086 J172_01512 J172_01513 PF02353 Mycolic acid cyclopropane synthetase J172_01514 PF07103 J172_01514 J172_01515 PF01593 Flavin containing amine oxidoreductase J172_01516 PF00487 J172_01516 J172_01517 PF10099 J172_01517 J172_01518 PF04542 Sigma-70 region 2 J172_01518 PF08281 Sigma-70, region 4 J172_01521 PF04060 Putative Fe-S cluster J172_01521 PF14697 4Fe-4S dicluster domain J172_01522 PF12710 haloacid dehalogenase-like hydrolase J172_01523 PF01588 Putative tRNA binding domain J172_01523 PF09334 tRNA synthetases class I (M) J172_01524 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J172_01525 PF01433 Peptidase family M1 J172_01525 PF12679 J172_01525 J172_01526 PF00005 ABC transporter J172_01527 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_01528 PF00324 Amino acid permease J172_01529 PF02574 Homocysteine S-methyltransferase J172_01530 PF05960 Bacterial protein of unknown function (DUF885) J172_01531 PF02592 J172_01531 J172_01532 PF04367 J172_01532 J172_01534 PF13372 Alginate export J172_01535 PF03551 Transcriptional regulator PadR-like family J172_01536 PF13796 J172_01536 J172_01537 PF06850 J172_01537 J172_01538 PF13489 Methyltransferase domain J172_01539 PF03653 J172_01539 J172_01541 PF14559 Tetratricopeptide repeat J172_01542 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J172_01543 PF01336 OB-fold nucleic acid binding domain J172_01543 PF02811 PHP domain J172_01543 PF07733 Bacterial DNA polymerase III alpha subunit J172_01543 PF14579 Helix-hairpin-helix motif J172_01544 PF01351 Ribonuclease HII J172_01545 PF02684 J172_01545 J172_01546 PF00132 Bacterial transferase hexapeptide (six repeats) J172_01546 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J172_01547 PF07977 FabA-like domain J172_01548 PF00132 Bacterial transferase hexapeptide (six repeats) J172_01548 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J172_01550 PF01103 Surface antigen J172_01550 PF07244 Surface antigen variable number repeat J172_01551 PF02163 Peptidase family M50 J172_01552 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J172_01552 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal J172_01552 PF13288 DXP reductoisomerase C-terminal domain J172_01553 PF01148 Cytidylyltransferase family J172_01554 PF01255 Putative undecaprenyl diphosphate synthase J172_01555 PF01765 Ribosome recycling factor J172_01556 PF00696 Amino acid kinase family J172_01557 PF00990 GGDEF domain J172_01557 PF08668 HDOD domain J172_01558 PF00889 Elongation factor TS J172_01559 PF00318 Ribosomal protein S2 J172_01560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J172_01562 PF05229 J172_01562 J172_01563 PF00577 Outer membrane usher protein J172_01563 PF13953 PapC C-terminal domain J172_01564 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J172_01565 PF05229 J172_01565 J172_01566 PF00557 Metallopeptidase family M24 J172_01567 PF01909 Nucleotidyltransferase domain J172_01567 PF01966 HD domain J172_01567 PF08335 GlnD PII-uridylyltransferase J172_01568 PF00132 Bacterial transferase hexapeptide (six repeats) J172_01568 PF14602 Hexapeptide repeat of succinyl-transferase J172_01568 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J172_01569 PF03960 ArsC family J172_01570 PF01546 Peptidase family M20/M25/M40 J172_01570 PF07687 Peptidase dimerisation domain J172_01571 PF00733 Asparagine synthase J172_01571 PF13537 Glutamine amidotransferase domain J172_01572 PF13229 Right handed beta helix region J172_01573 PF00593 TonB dependent receptor J172_01573 PF07715 TonB-dependent Receptor Plug Domain J172_01574 PF01804 Penicillin amidase J172_01575 PF01804 Penicillin amidase J172_01576 PF00210 Ferritin-like domain J172_01577 PF05724 Thiopurine S-methyltransferase (TPMT) J172_01579 PF00521 DNA gyrase/topoisomerase IV, subunit A J172_01579 PF03989 DNA gyrase C-terminal domain, beta-propeller J172_01580 PF02311 AraC-like ligand binding domain J172_01580 PF12833 Helix-turn-helix domain J172_01581 PF01047 MarR family J172_01582 PF02321 Outer membrane efflux protein J172_01583 PF00529 HlyD family secretion protein J172_01583 PF16576 J172_01583 J172_01584 PF07690 Major Facilitator Superfamily J172_01586 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_01586 PF01915 Glycosyl hydrolase family 3 C-terminal domain J172_01586 PF14310 Fibronectin type III-like domain J172_01587 PF00246 Zinc carboxypeptidase J172_01588 PF00854 POT family J172_01589 PF01694 Rhomboid family J172_01591 PF14542 GCN5-related N-acetyl-transferase J172_01593 PF01047 MarR family J172_01594 PF01432 Peptidase family M3 J172_01595 PF00255 Glutathione peroxidase J172_01596 PF00175 Oxidoreductase NAD-binding domain J172_01596 PF00970 Oxidoreductase FAD-binding domain J172_01597 PF00005 ABC transporter J172_01598 PF05681 J172_01598 J172_01598 PF05683 Fumarase C-terminus J172_01599 PF02798 Glutathione S-transferase, N-terminal domain J172_01599 PF14497 Glutathione S-transferase, C-terminal domain J172_01600 PF00484 Carbonic anhydrase J172_01601 PF02253 Phospholipase A1 J172_01602 PF04306 J172_01602 J172_01603 PF00313 'Cold-shock' DNA-binding domain J172_01604 PF05433 J172_01604 J172_01605 PF01322 Cytochrome C' J172_01606 PF00899 ThiF family J172_01607 PF01026 TatD related DNase J172_01609 PF05433 J172_01609 J172_01610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_01610 PF02770 Acyl-CoA dehydrogenase, middle domain J172_01610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_01611 PF01841 Transglutaminase-like superfamily J172_01611 PF12969 Domain of Unknown Function with PDB structure (DUF3857) J172_01612 PF00043 Glutathione S-transferase, C-terminal domain J172_01612 PF02798 Glutathione S-transferase, N-terminal domain J172_01613 PF00733 Asparagine synthase J172_01613 PF13537 Glutamine amidotransferase domain J172_01614 PF03358 NADPH-dependent FMN reductase J172_01615 PF00772 DnaB-like helicase N terminal domain J172_01615 PF03796 DnaB-like helicase C terminal domain J172_01616 PF00875 DNA photolyase J172_01616 PF03441 FAD binding domain of DNA photolyase J172_01617 PF00691 OmpA family J172_01617 PF13488 J172_01617 J172_01619 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01619 PF03466 LysR substrate binding domain J172_01621 PF00106 short chain dehydrogenase J172_01622 PF16576 J172_01622 J172_01623 PF00873 AcrB/AcrD/AcrF family J172_01624 PF00106 short chain dehydrogenase J172_01625 PF02321 Outer membrane efflux protein J172_01626 PF00990 GGDEF domain J172_01628 PF00990 GGDEF domain J172_01628 PF05227 CHASE3 domain J172_01628 PF13185 GAF domain J172_01634 PF06114 Domain of unknown function (DUF955) J172_01638 PF00589 Phage integrase family J172_01641 PF01381 Helix-turn-helix J172_01642 PF02661 Fic/DOC family J172_01645 PF01527 Transposase J172_01646 PF00665 Integrase core domain J172_01648 PF03389 MobA/MobL family J172_01651 PF13910 J172_01651 J172_01652 PF00589 Phage integrase family J172_01654 PF00082 Subtilase family J172_01655 PF01668 SmpB protein J172_01656 PF03364 Polyketide cyclase / dehydrase and lipid transport J172_01657 PF03658 RnfH family Ubiquitin J172_01658 PF04355 SmpA / OmlA family J172_01659 PF01475 Ferric uptake regulator family J172_01660 PF02463 RecF/RecN/SMC N terminal domain J172_01661 PF01628 HrcA protein C terminal domain J172_01661 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J172_01662 PF01025 GrpE J172_01663 PF00012 Hsp70 protein J172_01664 PF00226 DnaJ domain J172_01664 PF00684 DnaJ central domain J172_01664 PF01556 DnaJ C terminal domain J172_01666 PF08543 Phosphomethylpyrimidine kinase J172_01667 PF01842 ACT domain J172_01667 PF02153 Prephenate dehydrogenase J172_01669 PF02321 Outer membrane efflux protein J172_01670 PF16576 J172_01670 J172_01672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01672 PF03466 LysR substrate binding domain J172_01673 PF00005 ABC transporter J172_01673 PF00664 ABC transporter transmembrane region J172_01674 PF01205 Uncharacterized protein family UPF0029 J172_01674 PF09186 Domain of unknown function (DUF1949) J172_01675 PF03641 Possible lysine decarboxylase J172_01676 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J172_01676 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_01677 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J172_01677 PF00364 Biotin-requiring enzyme J172_01677 PF02817 e3 binding domain J172_01678 PF00676 Dehydrogenase E1 component J172_01678 PF02779 Transketolase, pyrimidine binding domain J172_01678 PF16078 J172_01678 J172_01678 PF16870 J172_01678 J172_01679 PF13673 Acetyltransferase (GNAT) domain J172_01680 PF08007 Cupin superfamily protein J172_01681 PF11259 J172_01681 J172_01682 PF00206 Lyase J172_01682 PF08328 Adenylosuccinate lyase C-terminal J172_01683 PF00188 Cysteine-rich secretory protein family J172_01684 PF00571 CBS domain J172_01684 PF01595 J172_01684 J172_01684 PF03471 Transporter associated domain J172_01685 PF00206 Lyase J172_01685 PF10415 Fumarase C C-terminus J172_01687 PF11101 J172_01687 J172_01690 PF00005 ABC transporter J172_01691 PF00392 Bacterial regulatory proteins, gntR family J172_01693 PF00255 Glutathione peroxidase J172_01694 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J172_01694 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J172_01695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J172_01695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J172_01695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J172_01696 PF04102 SlyX J172_01697 PF09831 J172_01697 J172_01698 PF13557 J172_01698 J172_01699 PF00356 Bacterial regulatory proteins, lacI family J172_01699 PF13377 Periplasmic binding protein-like domain J172_01700 PF07690 Major Facilitator Superfamily J172_01701 PF00294 pfkB family carbohydrate kinase J172_01702 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) J172_01703 PF00809 Pterin binding enzyme J172_01703 PF02310 B12 binding domain J172_01703 PF02607 B12 binding domain J172_01703 PF02965 Vitamin B12 dependent methionine synthase, activation domain J172_01704 PF02574 Homocysteine S-methyltransferase J172_01705 PF01022 Bacterial regulatory protein, arsR family J172_01705 PF08241 Methyltransferase domain J172_01706 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_01706 PF02770 Acyl-CoA dehydrogenase, middle domain J172_01706 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_01707 PF13472 GDSL-like Lipase/Acylhydrolase family J172_01709 PF00575 S1 RNA binding domain J172_01709 PF00773 RNB domain J172_01709 PF08206 Ribonuclease B OB domain J172_01710 PF04828 Glutathione-dependent formaldehyde-activating enzyme J172_01711 PF00588 SpoU rRNA Methylase family J172_01711 PF08032 RNA 2'-O ribose methyltransferase substrate binding J172_01712 PF00990 GGDEF domain J172_01712 PF07494 Two component regulator propeller J172_01712 PF07495 Y_Y_Y domain J172_01713 PF00929 Exonuclease J172_01714 PF11776 Domain of unknown function (DUF3315) J172_01715 PF01895 PhoU domain J172_01716 PF00005 ABC transporter J172_01717 PF00528 Binding-protein-dependent transport system inner membrane component J172_01718 PF00528 Binding-protein-dependent transport system inner membrane component J172_01719 PF12849 PBP superfamily domain J172_01720 PF12849 PBP superfamily domain J172_01721 PF07396 Phosphate-selective porin O and P J172_01723 PF00484 Carbonic anhydrase J172_01724 PF00916 J172_01724 J172_01725 PF00633 Helix-hairpin-helix motif J172_01725 PF00730 HhH-GPD superfamily base excision DNA repair protein J172_01727 PF00378 Enoyl-CoA hydratase/isomerase family J172_01728 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J172_01728 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J172_01729 PF00293 NUDIX domain J172_01729 PF06945 J172_01729 J172_01730 PF00581 Rhodanese-like domain J172_01731 PF07920 Protein of unknown function (DUF1684) J172_01732 PF01510 N-acetylmuramoyl-L-alanine amidase J172_01733 PF03473 MOSC domain J172_01734 PF05728 Uncharacterised protein family (UPF0227) J172_01735 PF00583 Acetyltransferase (GNAT) family J172_01736 PF00005 ABC transporter J172_01737 PF01170 Putative RNA methylase family UPF0020 J172_01737 PF02926 THUMP domain J172_01737 PF10672 S-adenosylmethionine-dependent methyltransferase J172_01738 PF01513 ATP-NAD kinase J172_01739 PF06189 J172_01739 J172_01740 PF11159 J172_01740 J172_01741 PF09365 J172_01741 J172_01742 PF00929 Exonuclease J172_01742 PF08411 Exonuclease C-terminal J172_01743 PF01494 FAD binding domain J172_01744 PF00266 Aminotransferase class-V J172_01745 PF12805 J172_01745 J172_01745 PF13515 J172_01745 J172_01746 PF06052 3-hydroxyanthranilic acid dioxygenase J172_01747 PF00484 Carbonic anhydrase J172_01748 PF05838 Glycosyl hydrolase 108 J172_01748 PF09374 Predicted Peptidoglycan domain J172_01749 PF11655 J172_01749 J172_01750 PF11655 J172_01750 J172_01756 PF00072 Response regulator receiver domain J172_01756 PF00196 Bacterial regulatory proteins, luxR family J172_01757 PF00161 Ribosome inactivating protein J172_01759 PF04299 Putative FMN-binding domain J172_01763 PF00152 tRNA synthetases class II (D, K and N) J172_01763 PF01336 OB-fold nucleic acid binding domain J172_01764 PF01521 Iron-sulphur cluster biosynthesis J172_01765 PF01250 Ribosomal protein S6 J172_01766 PF01084 Ribosomal protein S18 J172_01767 PF01281 Ribosomal protein L9, N-terminal domain J172_01767 PF03948 Ribosomal protein L9, C-terminal domain J172_01768 PF02463 RecF/RecN/SMC N terminal domain J172_01769 PF04354 ZipA, C-terminal FtsZ-binding domain J172_01771 PF00155 Aminotransferase class I and II J172_01772 PF00533 BRCA1 C Terminus (BRCT) domain J172_01772 PF01653 NAD-dependent DNA ligase adenylation domain J172_01772 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J172_01772 PF03120 NAD-dependent DNA ligase OB-fold domain J172_01772 PF12826 Helix-hairpin-helix motif J172_01773 PF00152 tRNA synthetases class II (D, K and N) J172_01774 PF11218 J172_01774 J172_01775 PF01008 Initiation factor 2 subunit family J172_01776 PF00521 DNA gyrase/topoisomerase IV, subunit A J172_01776 PF03989 DNA gyrase C-terminal domain, beta-propeller J172_01777 PF01011 PQQ enzyme repeat J172_01777 PF13360 PQQ-like domain J172_01779 PF01175 Urocanase J172_01779 PF17391 J172_01779 J172_01779 PF17392 J172_01779 J172_01780 PF05013 N-formylglutamate amidohydrolase J172_01781 PF00221 Aromatic amino acid lyase J172_01782 PF07969 Amidohydrolase family J172_01783 PF01979 Amidohydrolase family J172_01784 PF00392 Bacterial regulatory proteins, gntR family J172_01784 PF07702 UTRA domain J172_01785 PF04471 Restriction endonuclease J172_01787 PF05597 J172_01787 J172_01788 PF09650 J172_01788 J172_01789 PF16697 J172_01789 J172_01790 PF01794 J172_01790 J172_01791 PF00174 Oxidoreductase molybdopterin binding domain J172_01792 PF00266 Aminotransferase class-V J172_01793 PF00800 Prephenate dehydratase J172_01793 PF01817 Chorismate mutase type II J172_01793 PF01842 ACT domain J172_01794 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J172_01795 PF03544 Gram-negative bacterial TonB protein C-terminal J172_01796 PF03544 Gram-negative bacterial TonB protein C-terminal J172_01797 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J172_01797 PF02403 Seryl-tRNA synthetase N-terminal domain J172_01798 PF02525 Flavodoxin-like fold J172_01799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01799 PF03466 LysR substrate binding domain J172_01804 PF01527 Transposase J172_01805 PF00665 Integrase core domain J172_01805 PF13276 J172_01805 J172_01807 PF02399 J172_01807 J172_01808 PF00589 Phage integrase family J172_01808 PF13356 Domain of unknown function (DUF4102) J172_01809 PF04343 J172_01809 J172_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_01810 PF12729 J172_01810 J172_01811 PF01494 FAD binding domain J172_01812 PF01047 MarR family J172_01813 PF00072 Response regulator receiver domain J172_01813 PF00512 His Kinase A (phospho-acceptor) domain J172_01813 PF00989 PAS fold J172_01813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01813 PF08447 PAS fold J172_01813 PF08448 PAS fold J172_01814 PF00072 Response regulator receiver domain J172_01815 PF06745 KaiC J172_01816 PF00072 Response regulator receiver domain J172_01816 PF00512 His Kinase A (phospho-acceptor) domain J172_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01816 PF08448 PAS fold J172_01818 PF03918 Cytochrome C biogenesis protein J172_01819 PF00578 AhpC/TSA family J172_01820 PF01578 J172_01820 J172_01820 PF16327 J172_01820 J172_01821 PF03100 CcmE J172_01822 PF04995 J172_01822 J172_01823 PF01578 J172_01823 J172_01824 PF00082 Subtilase family J172_01825 PF13490 Putative zinc-finger J172_01826 PF04542 Sigma-70 region 2 J172_01826 PF08281 Sigma-70, region 4 J172_01829 PF00034 Cytochrome c J172_01831 PF01292 Prokaryotic cytochrome b561 J172_01832 PF05523 WxcM-like, C-terminal J172_01833 PF00132 Bacterial transferase hexapeptide (six repeats) J172_01835 PF13480 Acetyltransferase (GNAT) domain J172_01836 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J172_01837 PF13440 J172_01837 J172_01838 PF00535 Glycosyl transferase family 2 J172_01840 PF02706 Chain length determinant protein J172_01841 PF13649 Methyltransferase domain J172_01842 PF01979 Amidohydrolase family J172_01843 PF08241 Methyltransferase domain J172_01844 PF00534 Glycosyl transferases group 1 J172_01844 PF13439 Glycosyltransferase Family 4 J172_01845 PF00534 Glycosyl transferases group 1 J172_01845 PF13579 Glycosyl transferase 4-like domain J172_01846 PF14907 Uncharacterised nucleotidyltransferase J172_01847 PF04055 Radical SAM superfamily J172_01849 PF00005 ABC transporter J172_01850 PF00083 Sugar (and other) transporter J172_01851 PF00296 Luciferase-like monooxygenase J172_01852 PF16242 J172_01852 J172_01853 PF06055 J172_01853 J172_01854 PF00571 CBS domain J172_01854 PF01595 J172_01854 J172_01854 PF03471 Transporter associated domain J172_01855 PF01865 Protein of unknown function DUF47 J172_01856 PF01384 J172_01856 J172_01857 PF02698 DUF218 domain J172_01858 PF00450 Serine carboxypeptidase J172_01859 PF00204 DNA gyrase B J172_01859 PF00986 DNA gyrase B subunit, carboxyl terminus J172_01859 PF01751 Toprim domain J172_01859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01861 PF00117 Glutamine amidotransferase class-I J172_01861 PF06418 CTP synthase N-terminus J172_01862 PF00793 DAHP synthetase I family J172_01864 PF00113 Enolase, C-terminal TIM barrel domain J172_01864 PF03952 Enolase, N-terminal domain J172_01865 PF04977 Septum formation initiator J172_01866 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J172_01867 PF02542 YgbB family J172_01868 PF01142 tRNA pseudouridine synthase D (TruD) J172_01869 PF01713 Smr domain J172_01870 PF01975 Survival protein SurE J172_01871 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J172_01872 PF09335 J172_01872 J172_01873 PF01476 LysM domain J172_01873 PF01551 Peptidase family M23 J172_01875 PF04430 Protein of unknown function (DUF498/DUF598) J172_01876 PF01985 CRS1 / YhbY (CRM) domain J172_01877 PF01728 FtsJ-like methyltransferase J172_01878 PF00004 ATPase family associated with various cellular activities (AAA) J172_01878 PF01434 Peptidase family M41 J172_01878 PF06480 FtsH Extracellular J172_01879 PF00809 Pterin binding enzyme J172_01880 PF01715 IPP transferase J172_01881 PF17209 J172_01881 J172_01882 PF01926 50S ribosome-binding GTPase J172_01882 PF13167 J172_01882 J172_01882 PF16360 J172_01882 J172_01883 PF02464 Competence-damaged protein J172_01884 PF03109 J172_01884 J172_01885 PF00717 Peptidase S24-like J172_01885 PF01726 LexA DNA binding domain J172_01886 PF00154 recA bacterial DNA recombination protein J172_01887 PF02631 RecX family J172_01888 PF01411 tRNA synthetases class II (A) J172_01888 PF02272 DHHA1 domain J172_01888 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J172_01889 PF02599 Global regulator protein family J172_01891 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_01891 PF08447 PAS fold J172_01892 PF02678 Pirin J172_01893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01893 PF03466 LysR substrate binding domain J172_01894 PF00581 Rhodanese-like domain J172_01894 PF09335 J172_01894 J172_01897 PF12146 Putative lysophospholipase J172_01898 PF08543 Phosphomethylpyrimidine kinase J172_01899 PF06912 J172_01899 J172_01901 PF02562 PhoH-like protein J172_01901 PF13638 PIN domain J172_01902 PF00578 AhpC/TSA family J172_01903 PF06877 Regulator of ribonuclease activity B J172_01904 PF13740 ACT domain J172_01905 PF00701 Dihydrodipicolinate synthetase family J172_01907 PF00037 4Fe-4S binding domain J172_01907 PF11953 Domain of unknown function (DUF3470) J172_01908 PF05035 2-keto-3-deoxy-galactonokinase J172_01909 PF08450 SMP-30/Gluconolaconase/LRE-like region J172_01910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J172_01910 PF13378 Enolase C-terminal domain-like J172_01911 PF01081 KDPG and KHG aldolase J172_01913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_01913 PF03466 LysR substrate binding domain J172_01914 PF00593 TonB dependent receptor J172_01914 PF07715 TonB-dependent Receptor Plug Domain J172_01915 PF00593 TonB dependent receptor J172_01915 PF07715 TonB-dependent Receptor Plug Domain J172_01917 PF03629 Domain of unknown function (DUF303) J172_01917 PF13364 Beta-galactosidase jelly roll domain J172_01918 PF02449 Beta-galactosidase J172_01919 PF01055 Glycosyl hydrolases family 31 J172_01919 PF07691 PA14 domain J172_01919 PF16338 J172_01919 J172_01919 PF17137 J172_01919 J172_01920 PF14498 Glycosyl hydrolase family 65, N-terminal domain J172_01921 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J172_01921 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J172_01923 PF00083 Sugar (and other) transporter J172_01924 PF05231 J172_01924 J172_01926 PF01520 N-acetylmuramoyl-L-alanine amidase J172_01926 PF11741 AMIN domain J172_01927 PF02649 Type I GTP cyclohydrolase folE2 J172_01931 PF01743 Poly A polymerase head domain J172_01931 PF12626 Polymerase A arginine-rich C-terminus J172_01931 PF12627 Probable RNA and SrmB- binding site of polymerase A J172_01932 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J172_01933 PF02548 Ketopantoate hydroxymethyltransferase J172_01934 PF02569 Pantoate-beta-alanine ligase J172_01935 PF02261 Aspartate decarboxylase J172_01936 PF00342 Phosphoglucose isomerase J172_01937 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J172_01939 PF05787 Bacterial protein of unknown function (DUF839) J172_01940 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_01940 PF01915 Glycosyl hydrolase family 3 C-terminal domain J172_01941 PF00474 Sodium:solute symporter family J172_01942 PF00563 EAL domain J172_01942 PF00990 GGDEF domain J172_01942 PF01590 GAF domain J172_01943 PF00150 Cellulase (glycosyl hydrolase family 5) J172_01944 PF00072 Response regulator receiver domain J172_01944 PF02954 Bacterial regulatory protein, Fis family J172_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_01946 PF04551 GcpE protein J172_01947 PF01569 PAP2 superfamily J172_01948 PF07690 Major Facilitator Superfamily J172_01949 PF01177 Asp/Glu/Hydantoin racemase J172_01950 PF00892 EamA-like transporter family J172_01951 PF01565 FAD binding domain J172_01951 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J172_01952 PF01180 Dihydroorotate dehydrogenase J172_01953 PF08241 Methyltransferase domain J172_01954 PF13828 J172_01954 J172_01955 PF00171 Aldehyde dehydrogenase family J172_01957 PF13994 J172_01957 J172_01958 PF13641 Glycosyltransferase like family 2 J172_01959 PF01522 Polysaccharide deacetylase J172_01959 PF14883 Hypothetical glycosyl hydrolase family 13 J172_01960 PF13432 Tetratricopeptide repeat J172_01960 PF14559 Tetratricopeptide repeat J172_01961 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J172_01961 PF08479 POTRA domain, ShlB-type J172_01961 PF17287 J172_01961 J172_01962 PF05594 J172_01962 J172_01962 PF05860 haemagglutination activity domain J172_01962 PF13332 J172_01962 J172_01963 PF05594 J172_01963 J172_01963 PF13332 J172_01963 J172_01965 PF05594 J172_01965 J172_01966 PF03073 TspO/MBR family J172_01967 PF00696 Amino acid kinase family J172_01967 PF00742 Homoserine dehydrogenase J172_01967 PF03447 Homoserine dehydrogenase, NAD binding domain J172_01967 PF13840 ACT domain J172_01968 PF00288 GHMP kinases N terminal domain J172_01968 PF08544 GHMP kinases C terminal J172_01969 PF07110 EthD domain J172_01970 PF00291 Pyridoxal-phosphate dependent enzyme J172_01970 PF14821 Threonine synthase N terminus J172_01971 PF13645 J172_01971 J172_01972 PF00027 Cyclic nucleotide-binding domain J172_01972 PF13545 Crp-like helix-turn-helix domain J172_01973 PF03129 Anticodon binding domain J172_01973 PF13393 Histidyl-tRNA synthetase J172_01974 PF01371 Trp repressor protein J172_01975 PF01634 ATP phosphoribosyltransferase J172_01975 PF08029 HisG, C-terminal domain J172_01976 PF00815 Histidinol dehydrogenase J172_01977 PF00155 Aminotransferase class I and II J172_01978 PF00475 Imidazoleglycerol-phosphate dehydratase J172_01978 PF13242 HAD-hyrolase-like J172_01979 PF00117 Glutamine amidotransferase class-I J172_01980 PF00977 Histidine biosynthesis protein J172_01981 PF00977 Histidine biosynthesis protein J172_01982 PF01502 Phosphoribosyl-AMP cyclohydrolase J172_01982 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J172_01983 PF00149 Calcineurin-like phosphoesterase J172_01983 PF16370 J172_01983 J172_01983 PF16371 J172_01983 J172_01984 PF01650 Peptidase C13 family J172_01986 PF03079 ARD/ARD' family J172_01987 PF00596 Class II Aldolase and Adducin N-terminal domain J172_01988 PF13520 Amino acid permease J172_01989 PF13520 Amino acid permease J172_01990 PF00293 NUDIX domain J172_01991 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J172_01991 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J172_01992 PF01565 FAD binding domain J172_01992 PF02913 FAD linked oxidases, C-terminal domain J172_01993 PF09498 J172_01993 J172_01994 PF13387 J172_01994 J172_01996 PF01132 Elongation factor P (EF-P) OB domain J172_01996 PF08207 Elongation factor P (EF-P) KOW-like domain J172_01996 PF09285 Elongation factor P, C-terminal J172_01997 PF00106 short chain dehydrogenase J172_01998 PF00682 HMGL-like J172_01999 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_02000 PF00378 Enoyl-CoA hydratase/isomerase family J172_02001 PF04023 FeoA domain J172_02002 PF02421 Ferrous iron transport protein B J172_02002 PF07664 J172_02002 J172_02002 PF07670 Nucleoside recognition J172_02005 PF00155 Aminotransferase class I and II J172_02006 PF03473 MOSC domain J172_02006 PF03475 3-alpha domain J172_02007 PF01113 Dihydrodipicolinate reductase, N-terminus J172_02007 PF05173 Dihydrodipicolinate reductase, C-terminus J172_02008 PF00117 Glutamine amidotransferase class-I J172_02008 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J172_02010 PF02142 MGS-like domain J172_02010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J172_02010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J172_02011 PF01272 Transcription elongation factor, GreA/GreB, C-term J172_02011 PF03449 Transcription elongation factor, N-terminal J172_02013 PF01368 DHH family J172_02013 PF02272 DHHA1 domain J172_02014 PF05593 J172_02014 J172_02016 PF15649 J172_02016 J172_02020 PF01757 J172_02020 J172_02021 PF04397 LytTr DNA-binding domain J172_02022 PF00472 RF-1 domain J172_02022 PF03462 PCRF domain J172_02023 PF00152 tRNA synthetases class II (D, K and N) J172_02023 PF01336 OB-fold nucleic acid binding domain J172_02024 PF00072 Response regulator receiver domain J172_02024 PF01966 HD domain J172_02025 PF00072 Response regulator receiver domain J172_02025 PF00512 His Kinase A (phospho-acceptor) domain J172_02025 PF01627 Hpt domain J172_02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02026 PF00378 Enoyl-CoA hydratase/isomerase family J172_02027 PF00501 AMP-binding enzyme J172_02027 PF13193 AMP-binding enzyme C-terminal domain J172_02029 PF00330 Aconitase family (aconitate hydratase) J172_02029 PF00694 Aconitase C-terminal domain J172_02030 PF04014 Antidote-toxin recognition MazE J172_02031 PF01850 PIN domain J172_02032 PF00330 Aconitase family (aconitate hydratase) J172_02032 PF06434 Aconitate hydratase 2 N-terminus J172_02032 PF11791 Aconitate B N-terminal domain J172_02033 PF00561 alpha/beta hydrolase fold J172_02034 PF00563 EAL domain J172_02034 PF00990 GGDEF domain J172_02034 PF13185 GAF domain J172_02034 PF13426 PAS domain J172_02035 PF00072 Response regulator receiver domain J172_02035 PF01339 CheB methylesterase J172_02036 PF03975 CheD chemotactic sensory transduction J172_02037 PF01739 CheR methyltransferase, SAM binding domain J172_02037 PF03705 CheR methyltransferase, all-alpha domain J172_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02038 PF00672 HAMP domain J172_02038 PF12729 J172_02038 J172_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02039 PF00672 HAMP domain J172_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02040 PF12729 J172_02040 J172_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02041 PF00672 HAMP domain J172_02041 PF05227 CHASE3 domain J172_02042 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02042 PF00672 HAMP domain J172_02042 PF12729 J172_02042 J172_02043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02043 PF12729 J172_02043 J172_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02045 PF13557 J172_02045 J172_02046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02046 PF00672 HAMP domain J172_02046 PF02743 Cache domain J172_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02047 PF17200 J172_02047 J172_02049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02049 PF00672 HAMP domain J172_02049 PF12729 J172_02049 J172_02050 PF01584 CheW-like domain J172_02050 PF01627 Hpt domain J172_02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02050 PF02895 Signal transducing histidine kinase, homodimeric domain J172_02051 PF00072 Response regulator receiver domain J172_02052 PF13466 STAS domain J172_02053 PF01584 CheW-like domain J172_02054 PF13614 AAA domain J172_02055 PF00691 OmpA family J172_02055 PF13677 J172_02055 J172_02056 PF01618 J172_02056 J172_02058 PF00593 TonB dependent receptor J172_02058 PF07715 TonB-dependent Receptor Plug Domain J172_02059 PF00069 Protein kinase domain J172_02062 PF08845 J172_02062 J172_02064 PF01609 Transposase DDE domain J172_02067 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J172_02068 PF00665 Integrase core domain J172_02068 PF13276 J172_02068 J172_02069 PF01527 Transposase J172_02072 PF13683 J172_02072 J172_02073 PF01381 Helix-turn-helix J172_02075 PF04055 Radical SAM superfamily J172_02075 PF13353 4Fe-4S single cluster domain J172_02077 PF01609 Transposase DDE domain J172_02078 PF01584 CheW-like domain J172_02078 PF01627 Hpt domain J172_02078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02078 PF02895 Signal transducing histidine kinase, homodimeric domain J172_02079 PF04344 Chemotaxis phosphatase, CheZ J172_02080 PF00072 Response regulator receiver domain J172_02081 PF04539 Sigma-70 region 3 J172_02081 PF04542 Sigma-70 region 2 J172_02081 PF04545 Sigma-70, region 4 J172_02082 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_02083 PF00448 SRP54-type protein, GTPase domain J172_02084 PF00771 FHIPEP family J172_02085 PF01312 FlhB HrpN YscU SpaS Family J172_02086 PF00563 EAL domain J172_02086 PF00990 GGDEF domain J172_02086 PF03707 J172_02086 J172_02087 PF00990 GGDEF domain J172_02087 PF07495 Y_Y_Y domain J172_02088 PF00990 GGDEF domain J172_02088 PF07494 Two component regulator propeller J172_02088 PF07495 Y_Y_Y domain J172_02089 PF01311 J172_02089 J172_02090 PF01313 J172_02090 J172_02092 PF00813 J172_02092 J172_02093 PF04347 J172_02093 J172_02094 PF01052 Surface presentation of antigens (SPOA) J172_02095 PF01052 Surface presentation of antigens (SPOA) J172_02095 PF02154 Flagellar motor switch protein FliM J172_02096 PF03748 J172_02096 J172_02097 PF02120 Flagellar hook-length control protein FliK J172_02098 PF02050 Flagellar FliJ protein J172_02099 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J172_02100 PF02108 J172_02100 J172_02101 PF01706 FliG C-terminal domain J172_02101 PF14841 FliG middle domain J172_02101 PF14842 FliG N-terminal domain J172_02102 PF01514 Secretory protein of YscJ/FliF family J172_02102 PF08345 J172_02102 J172_02103 PF02049 J172_02103 J172_02104 PF00535 Glycosyl transferase family 2 J172_02106 PF05050 Methyltransferase FkbM domain J172_02107 PF00132 Bacterial transferase hexapeptide (six repeats) J172_02108 PF00355 Rieske [2Fe-2S] domain J172_02108 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J172_02109 PF00132 Bacterial transferase hexapeptide (six repeats) J172_02109 PF14602 Hexapeptide repeat of succinyl-transferase J172_02110 PF13561 Enoyl-(Acyl carrier protein) reductase J172_02111 PF13561 Enoyl-(Acyl carrier protein) reductase J172_02112 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J172_02112 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J172_02114 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J172_02115 PF00158 Sigma-54 interaction domain J172_02115 PF02954 Bacterial regulatory protein, Fis family J172_02115 PF06490 J172_02115 J172_02116 PF00072 Response regulator receiver domain J172_02117 PF00309 J172_02117 J172_02117 PF04552 Sigma-54, DNA binding domain J172_02117 PF04963 Sigma-54 factor, core binding domain J172_02118 PF00072 Response regulator receiver domain J172_02118 PF00196 Bacterial regulatory proteins, luxR family J172_02119 PF16823 J172_02119 J172_02121 PF02561 Flagellar protein FliS J172_02122 PF02465 J172_02122 J172_02122 PF07195 J172_02122 J172_02122 PF07196 Flagellin hook IN motif J172_02123 PF00669 Bacterial flagellin N-terminal helical region J172_02123 PF00700 Bacterial flagellin C-terminal helical region J172_02123 PF07196 Flagellin hook IN motif J172_02124 PF00669 Bacterial flagellin N-terminal helical region J172_02124 PF00700 Bacterial flagellin C-terminal helical region J172_02125 PF00460 Flagella basal body rod protein J172_02125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J172_02126 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J172_02126 PF10135 J172_02126 J172_02127 PF02119 J172_02127 J172_02128 PF02107 J172_02128 J172_02129 PF00460 Flagella basal body rod protein J172_02129 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J172_02130 PF00460 Flagella basal body rod protein J172_02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J172_02131 PF00460 Flagella basal body rod protein J172_02131 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J172_02131 PF07559 Flagellar basal body protein FlaE J172_02132 PF03963 J172_02132 J172_02132 PF13860 FlgD Ig-like domain J172_02132 PF13861 FlgD Tudor-like domain J172_02133 PF00460 Flagella basal body rod protein J172_02133 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J172_02134 PF00460 Flagella basal body rod protein J172_02135 PF00072 Response regulator receiver domain J172_02135 PF01584 CheW-like domain J172_02136 PF13144 SAF-like J172_02137 PF04316 Anti-sigma-28 factor, FlgM J172_02139 PF00512 His Kinase A (phospho-acceptor) domain J172_02139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02140 PF00072 Response regulator receiver domain J172_02140 PF00563 EAL domain J172_02140 PF00990 GGDEF domain J172_02141 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02141 PF07730 Histidine kinase J172_02141 PF08448 PAS fold J172_02141 PF13426 PAS domain J172_02142 PF00563 EAL domain J172_02142 PF00990 GGDEF domain J172_02142 PF08447 PAS fold J172_02142 PF13426 PAS domain J172_02144 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02145 PF04356 Protein of unknown function (DUF489) J172_02146 PF03054 tRNA methyl transferase J172_02147 PF00293 NUDIX domain J172_02148 PF02617 ATP-dependent Clp protease adaptor protein ClpS J172_02149 PF00004 ATPase family associated with various cellular activities (AAA) J172_02149 PF02861 Clp amino terminal domain J172_02149 PF07724 AAA domain (Cdc48 subfamily) J172_02149 PF10431 C-terminal, D2-small domain, of ClpB protein J172_02150 PF01176 Translation initiation factor 1A / IF-1 J172_02151 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J172_02152 PF04339 J172_02152 J172_02153 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_02154 PF01580 FtsK/SpoIIIE family J172_02154 PF09397 Ftsk gamma domain J172_02154 PF13491 J172_02154 J172_02155 PF01841 Transglutaminase-like superfamily J172_02155 PF12969 Domain of Unknown Function with PDB structure (DUF3857) J172_02156 PF03548 Outer membrane lipoprotein carrier protein LolA J172_02158 PF00004 ATPase family associated with various cellular activities (AAA) J172_02158 PF12002 MgsA AAA+ ATPase C terminal J172_02158 PF16193 J172_02158 J172_02160 PF02537 J172_02160 J172_02162 PF00108 Thiolase, N-terminal domain J172_02162 PF02803 Thiolase, C-terminal domain J172_02163 PF00378 Enoyl-CoA hydratase/isomerase family J172_02163 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J172_02163 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J172_02164 PF00440 Bacterial regulatory proteins, tetR family J172_02165 PF00334 Nucleoside diphosphate kinase J172_02166 PF04055 Radical SAM superfamily J172_02167 PF13432 Tetratricopeptide repeat J172_02168 PF13413 Helix-turn-helix domain J172_02168 PF13464 J172_02168 J172_02169 PF09976 Tetratricopeptide repeat J172_02170 PF13360 PQQ-like domain J172_02171 PF01926 50S ribosome-binding GTPase J172_02171 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J172_02172 PF00994 Probable molybdopterin binding domain J172_02172 PF03453 MoeA N-terminal region (domain I and II) J172_02172 PF03454 MoeA C-terminal region (domain IV) J172_02173 PF00581 Rhodanese-like domain J172_02173 PF00899 ThiF family J172_02174 PF00593 TonB dependent receptor J172_02174 PF07715 TonB-dependent Receptor Plug Domain J172_02176 PF13628 J172_02176 J172_02178 PF00107 Zinc-binding dehydrogenase J172_02178 PF08240 Alcohol dehydrogenase GroES-like domain J172_02178 PF13823 Alcohol dehydrogenase GroES-associated J172_02179 PF06884 J172_02179 J172_02180 PF03372 Endonuclease/Exonuclease/phosphatase family J172_02181 PF04193 PQ loop repeat J172_02182 PF00994 Probable molybdopterin binding domain J172_02182 PF03453 MoeA N-terminal region (domain I and II) J172_02182 PF03454 MoeA C-terminal region (domain IV) J172_02183 PF12804 MobA-like NTP transferase domain J172_02185 PF12697 Alpha/beta hydrolase family J172_02186 PF01566 J172_02186 J172_02187 PF01325 Iron dependent repressor, N-terminal DNA binding domain J172_02187 PF02742 Iron dependent repressor, metal binding and dimerisation domain J172_02188 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J172_02189 PF00929 Exonuclease J172_02190 PF00924 Mechanosensitive ion channel J172_02191 PF00391 PEP-utilising enzyme, mobile domain J172_02191 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J172_02191 PF02896 PEP-utilising enzyme, TIM barrel domain J172_02192 PF03618 J172_02192 J172_02193 PF06853 J172_02193 J172_02194 PF00293 NUDIX domain J172_02195 PF13561 Enoyl-(Acyl carrier protein) reductase J172_02196 PF01066 CDP-alcohol phosphatidyltransferase J172_02197 PF09712 J172_02197 J172_02198 PF00561 alpha/beta hydrolase fold J172_02199 PF04024 J172_02199 J172_02201 PF01266 FAD dependent oxidoreductase J172_02203 PF00575 S1 RNA binding domain J172_02203 PF09371 Tex-like protein N-terminal domain J172_02203 PF12836 Helix-hairpin-helix motif J172_02203 PF16921 J172_02203 J172_02204 PF00072 Response regulator receiver domain J172_02204 PF00512 His Kinase A (phospho-acceptor) domain J172_02204 PF01590 GAF domain J172_02204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02204 PF08447 PAS fold J172_02204 PF08448 PAS fold J172_02204 PF13185 GAF domain J172_02212 PF00034 Cytochrome c J172_02213 PF00034 Cytochrome c J172_02214 PF00529 HlyD family secretion protein J172_02214 PF16576 J172_02214 J172_02215 PF00873 AcrB/AcrD/AcrF family J172_02216 PF00873 AcrB/AcrD/AcrF family J172_02217 PF01081 KDPG and KHG aldolase J172_02218 PF00920 Dehydratase family J172_02219 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J172_02220 PF02685 Glucokinase J172_02221 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J172_02221 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J172_02222 PF00005 ABC transporter J172_02222 PF08402 TOBE domain J172_02223 PF01571 Aminomethyltransferase folate-binding domain J172_02223 PF08669 Glycine cleavage T-protein C-terminal barrel domain J172_02224 PF07896 Protein of unknown function (DUF1674) J172_02225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J172_02226 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J172_02227 PF00890 FAD binding domain J172_02227 PF02910 Fumarate reductase flavoprotein C-term J172_02229 PF13085 2Fe-2S iron-sulfur cluster binding domain J172_02229 PF13534 4Fe-4S dicluster domain J172_02230 PF03937 Flavinator of succinate dehydrogenase J172_02232 PF02687 J172_02232 J172_02232 PF12704 MacB-like periplasmic core domain J172_02233 PF00005 ABC transporter J172_02234 PF01370 NAD dependent epimerase/dehydratase family J172_02235 PF00753 Metallo-beta-lactamase superfamily J172_02235 PF03772 J172_02235 J172_02235 PF13567 J172_02235 J172_02236 PF01618 J172_02236 J172_02237 PF02472 Biopolymer transport protein ExbD/TolR J172_02238 PF00005 ABC transporter J172_02238 PF00664 ABC transporter transmembrane region J172_02239 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J172_02240 PF02348 Cytidylyltransferase J172_02241 PF01451 Low molecular weight phosphotyrosine protein phosphatase J172_02242 PF01436 NHL repeat J172_02243 PF01541 GIY-YIG catalytic domain J172_02243 PF02151 UvrB/uvrC motif J172_02243 PF08459 UvrC Helix-hairpin-helix N-terminal J172_02244 PF01066 CDP-alcohol phosphatidyltransferase J172_02248 PF00501 AMP-binding enzyme J172_02248 PF00550 Phosphopantetheine attachment site J172_02248 PF00668 Condensation domain J172_02248 PF13193 AMP-binding enzyme C-terminal domain J172_02249 PF00501 AMP-binding enzyme J172_02249 PF00550 Phosphopantetheine attachment site J172_02249 PF00668 Condensation domain J172_02249 PF00975 Thioesterase domain J172_02249 PF13193 AMP-binding enzyme C-terminal domain J172_02250 PF00665 Integrase core domain J172_02251 PF01527 Transposase J172_02252 PF00665 Integrase core domain J172_02252 PF13276 J172_02252 J172_02253 PF01527 Transposase J172_02254 PF00589 Phage integrase family J172_02256 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J172_02256 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J172_02256 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J172_02257 PF03486 HI0933-like protein J172_02258 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J172_02260 PF00581 Rhodanese-like domain J172_02261 PF00072 Response regulator receiver domain J172_02261 PF00196 Bacterial regulatory proteins, luxR family J172_02262 PF00575 S1 RNA binding domain J172_02262 PF10150 Ribonuclease E/G family J172_02263 PF00849 RNA pseudouridylate synthase J172_02263 PF01479 S4 domain J172_02264 PF11737 J172_02264 J172_02265 PF02535 J172_02265 J172_02266 PF03544 Gram-negative bacterial TonB protein C-terminal J172_02267 PF01329 Pterin 4 alpha carbinolamine dehydratase J172_02268 PF01106 NifU-like domain J172_02271 PF04940 Sensors of blue-light using FAD J172_02272 PF01596 O-methyltransferase J172_02273 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_02274 PF02585 GlcNAc-PI de-N-acetylase J172_02275 PF05401 Nodulation protein S (NodS) J172_02276 PF00535 Glycosyl transferase family 2 J172_02277 PF13618 J172_02277 J172_02278 PF00732 GMC oxidoreductase J172_02278 PF05199 GMC oxidoreductase J172_02279 PF13561 Enoyl-(Acyl carrier protein) reductase J172_02280 PF12375 J172_02280 J172_02283 PF00665 Integrase core domain J172_02283 PF13276 J172_02283 J172_02284 PF01527 Transposase J172_02286 PF09335 J172_02286 J172_02289 PF07995 Glucose / Sorbosone dehydrogenase J172_02291 PF00144 Beta-lactamase J172_02292 PF00072 Response regulator receiver domain J172_02292 PF04397 LytTr DNA-binding domain J172_02293 PF06580 J172_02293 J172_02295 PF00082 Subtilase family J172_02295 PF03797 Autotransporter beta-domain J172_02295 PF12951 J172_02295 J172_02296 PF16576 J172_02296 J172_02297 PF00873 AcrB/AcrD/AcrF family J172_02298 PF02321 Outer membrane efflux protein J172_02299 PF00512 His Kinase A (phospho-acceptor) domain J172_02299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02300 PF00072 Response regulator receiver domain J172_02300 PF00196 Bacterial regulatory proteins, luxR family J172_02301 PF12951 J172_02301 J172_02301 PF13018 J172_02301 J172_02302 PF00563 EAL domain J172_02303 PF07081 Protein of unknown function (DUF1349) J172_02304 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J172_02305 PF05974 Domain of unknown function (DUF892) J172_02306 PF10685 J172_02306 J172_02307 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J172_02307 PF03861 ANTAR domain J172_02309 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J172_02309 PF10414 Sirohaem synthase dimerisation region J172_02309 PF13241 Putative NAD(P)-binding J172_02309 PF14824 Sirohaem biosynthesis protein central J172_02312 PF05977 Transmembrane secretion effector J172_02313 PF07969 Amidohydrolase family J172_02314 PF07681 J172_02314 J172_02315 PF00857 Isochorismatase family J172_02316 PF12833 Helix-turn-helix domain J172_02317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02317 PF07495 Y_Y_Y domain J172_02317 PF07730 Histidine kinase J172_02318 PF00072 Response regulator receiver domain J172_02318 PF00196 Bacterial regulatory proteins, luxR family J172_02319 PF17201 J172_02319 J172_02321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_02321 PF03466 LysR substrate binding domain J172_02322 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_02322 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J172_02323 PF10070 J172_02323 J172_02324 PF00665 Integrase core domain J172_02324 PF13276 J172_02324 J172_02325 PF01527 Transposase J172_02326 PF13560 Helix-turn-helix domain J172_02327 PF05284 J172_02327 J172_02328 PF04002 RadC-like JAB domain J172_02329 PF05930 Prophage CP4-57 regulatory protein (AlpA) J172_02331 PF08843 Nucleotidyl transferase of unknown function (DUF1814) J172_02332 PF11459 J172_02332 J172_02332 PF17194 J172_02332 J172_02333 PF00589 Phage integrase family J172_02333 PF13356 Domain of unknown function (DUF4102) J172_02333 PF14659 Phage integrase, N-terminal SAM-like domain J172_02336 PF00593 TonB dependent receptor J172_02336 PF07715 TonB-dependent Receptor Plug Domain J172_02337 PF07916 J172_02337 J172_02338 PF12553 J172_02338 J172_02339 PF01850 PIN domain J172_02340 PF04014 Antidote-toxin recognition MazE J172_02341 PF16263 J172_02341 J172_02343 PF04542 Sigma-70 region 2 J172_02343 PF08281 Sigma-70, region 4 J172_02344 PF04773 FecR protein J172_02344 PF16220 J172_02344 J172_02345 PF00593 TonB dependent receptor J172_02345 PF07715 TonB-dependent Receptor Plug Domain J172_02348 PF10947 J172_02348 J172_02349 PF07514 Putative helicase J172_02349 PF07515 Protein of unknown function (DUF1528) J172_02350 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J172_02350 PF05345 Putative Ig domain J172_02350 PF06594 J172_02350 J172_02351 PF00353 Hemolysin-type calcium-binding repeat (2 copies) J172_02354 PF13437 HlyD family secretion protein J172_02354 PF13533 Biotin-lipoyl like J172_02355 PF00005 ABC transporter J172_02355 PF00664 ABC transporter transmembrane region J172_02356 PF05930 Prophage CP4-57 regulatory protein (AlpA) J172_02357 PF13614 AAA domain J172_02360 PF11198 J172_02360 J172_02362 PF08900 J172_02362 J172_02363 PF11358 J172_02363 J172_02364 PF00436 Single-strand binding protein family J172_02366 PF01131 DNA topoisomerase J172_02366 PF01396 J172_02366 J172_02367 PF00145 C-5 cytosine-specific DNA methylase J172_02369 PF13304 AAA domain J172_02377 PF11284 J172_02377 J172_02378 PF00589 Phage integrase family J172_02378 PF13356 Domain of unknown function (DUF4102) J172_02378 PF14659 Phage integrase, N-terminal SAM-like domain J172_02379 PF06250 J172_02379 J172_02380 PF01527 Transposase J172_02381 PF00665 Integrase core domain J172_02381 PF13276 J172_02381 J172_02382 PF00892 EamA-like transporter family J172_02383 PF00892 EamA-like transporter family J172_02384 PF00440 Bacterial regulatory proteins, tetR family J172_02385 PF02525 Flavodoxin-like fold J172_02386 PF00043 Glutathione S-transferase, C-terminal domain J172_02386 PF13417 Glutathione S-transferase, N-terminal domain J172_02387 PF05544 Proline racemase J172_02388 PF03358 NADPH-dependent FMN reductase J172_02388 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease J172_02389 PF13561 Enoyl-(Acyl carrier protein) reductase J172_02390 PF07690 Major Facilitator Superfamily J172_02391 PF12833 Helix-turn-helix domain J172_02393 PF12101 J172_02393 J172_02394 PF11679 J172_02394 J172_02400 PF00271 Helicase conserved C-terminal domain J172_02403 PF07791 J172_02403 J172_02404 PF14412 J172_02404 J172_02413 PF01464 Transglycosylase SLT domain J172_02414 PF11072 J172_02414 J172_02415 PF12696 TraM recognition site of TraD and TraG J172_02416 PF14348 J172_02416 J172_02417 PF12532 J172_02417 J172_02417 PF13476 AAA domain J172_02421 PF13245 Part of AAA domain J172_02421 PF13361 UvrD-like helicase C-terminal domain J172_02426 PF09686 J172_02426 J172_02427 PF11660 J172_02427 J172_02428 PF11190 J172_02428 J172_02429 PF11990 J172_02429 J172_02430 PF11444 J172_02430 J172_02431 PF11920 J172_02431 J172_02434 PF11130 J172_02434 J172_02435 PF13462 Thioredoxin J172_02436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_02436 PF03466 LysR substrate binding domain J172_02437 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J172_02437 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J172_02438 PF03401 Tripartite tricarboxylate transporter family receptor J172_02439 PF06684 Amino acid synthesis J172_02442 PF04002 RadC-like JAB domain J172_02443 PF07511 J172_02443 J172_02444 PF06834 J172_02444 J172_02446 PF01507 Phosphoadenosine phosphosulfate reductase family J172_02448 PF05930 Prophage CP4-57 regulatory protein (AlpA) J172_02449 PF00589 Phage integrase family J172_02449 PF13356 Domain of unknown function (DUF4102) J172_02449 PF14659 Phage integrase, N-terminal SAM-like domain J172_02450 PF00117 Glutamine amidotransferase class-I J172_02450 PF00958 GMP synthase C terminal domain J172_02450 PF02540 NAD synthase J172_02451 PF00478 IMP dehydrogenase / GMP reductase domain J172_02451 PF00571 CBS domain J172_02452 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J172_02452 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J172_02453 PF06844 Protein of unknown function (DUF1244) J172_02454 PF00999 Sodium/hydrogen exchanger family J172_02454 PF02254 TrkA-N domain J172_02455 PF00483 Nucleotidyl transferase J172_02456 PF02719 Polysaccharide biosynthesis protein J172_02456 PF13727 CoA-binding domain J172_02457 PF00953 Glycosyl transferase family 4 J172_02458 PF13432 Tetratricopeptide repeat J172_02459 PF06305 J172_02459 J172_02460 PF00216 Bacterial DNA-binding protein J172_02461 PF00575 S1 RNA binding domain J172_02462 PF02224 Cytidylate kinase J172_02463 PF00444 Ribosomal protein L36 J172_02466 PF04371 Porphyromonas-type peptidyl-arginine deiminase J172_02467 PF00795 Carbon-nitrogen hydrolase J172_02468 PF13420 Acetyltransferase (GNAT) domain J172_02469 PF01963 J172_02469 J172_02470 PF03372 Endonuclease/Exonuclease/phosphatase family J172_02471 PF00754 F5/8 type C domain J172_02471 PF06202 Amylo-alpha-1,6-glucosidase J172_02472 PF00528 Binding-protein-dependent transport system inner membrane component J172_02473 PF00528 Binding-protein-dependent transport system inner membrane component J172_02474 PF13416 Bacterial extracellular solute-binding protein J172_02475 PF10091 Putative glucoamylase J172_02476 PF00593 TonB dependent receptor J172_02476 PF13620 Carboxypeptidase regulatory-like domain J172_02477 PF00356 Bacterial regulatory proteins, lacI family J172_02477 PF13377 Periplasmic binding protein-like domain J172_02478 PF01722 BolA-like protein J172_02479 PF03795 YCII-related domain J172_02480 PF02616 ScpA/B protein J172_02481 PF04079 Putative transcriptional regulators (Ypuh-like) J172_02482 PF00849 RNA pseudouridylate synthase J172_02482 PF01479 S4 domain J172_02484 PF05096 Glutamine cyclotransferase J172_02485 PF00795 Carbon-nitrogen hydrolase J172_02486 PF00155 Aminotransferase class I and II J172_02487 PF00005 ABC transporter J172_02488 PF03379 J172_02488 J172_02489 PF01578 J172_02489 J172_02490 PF04995 J172_02490 J172_02491 PF03100 CcmE J172_02492 PF01578 J172_02492 J172_02492 PF16327 J172_02492 J172_02493 PF08534 Redoxin J172_02494 PF03918 Cytochrome C biogenesis protein J172_02495 PF13432 Tetratricopeptide repeat J172_02496 PF00561 alpha/beta hydrolase fold J172_02497 PF00313 'Cold-shock' DNA-binding domain J172_02497 PF06961 J172_02497 J172_02498 PF00005 ABC transporter J172_02498 PF00664 ABC transporter transmembrane region J172_02499 PF00005 ABC transporter J172_02499 PF00664 ABC transporter transmembrane region J172_02500 PF01654 J172_02500 J172_02501 PF02322 J172_02501 J172_02502 PF08173 J172_02502 J172_02504 PF07690 Major Facilitator Superfamily J172_02505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J172_02505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J172_02506 PF00171 Aldehyde dehydrogenase family J172_02507 PF00696 Amino acid kinase family J172_02507 PF01472 PUA domain J172_02508 PF03795 YCII-related domain J172_02509 PF00206 Lyase J172_02510 PF01118 Semialdehyde dehydrogenase, NAD binding domain J172_02511 PF13302 Acetyltransferase (GNAT) domain J172_02512 PF00696 Amino acid kinase family J172_02512 PF04768 Protein of unknown function (DUF619) J172_02513 PF01546 Peptidase family M20/M25/M40 J172_02513 PF07687 Peptidase dimerisation domain J172_02514 PF13508 Acetyltransferase (GNAT) domain J172_02515 PF00764 Arginosuccinate synthase J172_02516 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J172_02516 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J172_02518 PF01406 tRNA synthetases class I (C) catalytic domain J172_02518 PF09190 DALR domain J172_02519 PF02657 Fe-S metabolism associated domain J172_02520 PF05977 Transmembrane secretion effector J172_02521 PF01258 Prokaryotic dksA/traR C4-type zinc finger J172_02522 PF01809 J172_02522 J172_02523 PF01979 Amidohydrolase family J172_02524 PF01551 Peptidase family M23 J172_02525 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_02526 PF13520 Amino acid permease J172_02527 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J172_02528 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J172_02530 PF00753 Metallo-beta-lactamase superfamily J172_02531 PF16242 J172_02531 J172_02534 PF01527 Transposase J172_02535 PF00544 Pectate lyase J172_02537 PF00295 Glycosyl hydrolases family 28 J172_02539 PF13419 Haloacid dehalogenase-like hydrolase J172_02540 PF13489 Methyltransferase domain J172_02541 PF01979 Amidohydrolase family J172_02543 PF01132 Elongation factor P (EF-P) OB domain J172_02543 PF08207 Elongation factor P (EF-P) KOW-like domain J172_02543 PF09285 Elongation factor P, C-terminal J172_02544 PF13353 4Fe-4S single cluster domain J172_02545 PF00563 EAL domain J172_02545 PF00672 HAMP domain J172_02545 PF00990 GGDEF domain J172_02545 PF17203 J172_02545 J172_02546 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein J172_02547 PF00588 SpoU rRNA Methylase family J172_02548 PF00459 Inositol monophosphatase family J172_02549 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J172_02549 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J172_02550 PF00545 ribonuclease J172_02551 PF01337 Barstar (barnase inhibitor) J172_02552 PF00005 ABC transporter J172_02552 PF12848 ABC transporter J172_02552 PF16326 J172_02552 J172_02553 PF00270 DEAD/DEAH box helicase J172_02553 PF00271 Helicase conserved C-terminal domain J172_02553 PF03880 DbpA RNA binding domain J172_02554 PF00156 Phosphoribosyl transferase domain J172_02555 PF02696 J172_02555 J172_02556 PF07859 alpha/beta hydrolase fold J172_02557 PF00043 Glutathione S-transferase, C-terminal domain J172_02557 PF02798 Glutathione S-transferase, N-terminal domain J172_02558 PF00313 'Cold-shock' DNA-binding domain J172_02559 PF07152 YaeQ protein J172_02560 PF03486 HI0933-like protein J172_02561 PF00563 EAL domain J172_02561 PF00990 GGDEF domain J172_02561 PF13188 PAS domain J172_02562 PF01435 Peptidase family M48 J172_02563 PF00749 tRNA synthetases class I (E and Q), catalytic domain J172_02564 PF00106 short chain dehydrogenase J172_02565 PF05233 J172_02565 J172_02565 PF07879 J172_02565 J172_02566 PF01963 J172_02566 J172_02567 PF07920 Protein of unknown function (DUF1684) J172_02568 PF01119 DNA mismatch repair protein, C-terminal domain J172_02568 PF08676 MutL C terminal dimerisation domain J172_02568 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02569 PF01520 N-acetylmuramoyl-L-alanine amidase J172_02569 PF11741 AMIN domain J172_02570 PF02367 Uncharacterised P-loop hydrolase UPF0079 J172_02571 PF01256 Carbohydrate kinase J172_02571 PF03853 YjeF-related protein N-terminus J172_02572 PF08331 J172_02572 J172_02572 PF13484 J172_02572 J172_02573 PF02601 J172_02573 J172_02573 PF13742 J172_02573 J172_02574 PF06057 Bacterial virulence protein (VirJ) J172_02575 PF03781 Sulfatase-modifying factor enzyme 1 J172_02576 PF00570 HRDC domain J172_02576 PF01612 3'-5' exonuclease J172_02578 PF01068 ATP dependent DNA ligase domain J172_02578 PF04679 ATP dependent DNA ligase C terminal region J172_02578 PF13298 DNA polymerase Ligase (LigD) J172_02579 PF12244 J172_02579 J172_02580 PF00816 H-NS histone family J172_02582 PF00589 Phage integrase family J172_02586 PF01609 Transposase DDE domain J172_02586 PF05598 J172_02586 J172_02587 PF00665 Integrase core domain J172_02588 PF01527 Transposase J172_02592 PF01402 Ribbon-helix-helix protein, copG family J172_02593 PF01526 J172_02593 J172_02596 PF00665 Integrase core domain J172_02596 PF13276 J172_02596 J172_02598 PF00239 Resolvase, N terminal domain J172_02599 PF13166 J172_02599 J172_02601 PF02384 N-6 DNA Methylase J172_02602 PF09572 J172_02602 J172_02604 PF07929 Plasmid pRiA4b ORF-3-like protein J172_02606 PF01402 Ribbon-helix-helix protein, copG family J172_02608 PF04796 J172_02608 J172_02609 PF13289 J172_02609 J172_02610 PF01935 Domain of unknown function DUF87 J172_02613 PF00990 GGDEF domain J172_02614 PF01584 CheW-like domain J172_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_02615 PF00672 HAMP domain J172_02615 PF12729 J172_02615 J172_02616 PF02245 Methylpurine-DNA glycosylase (MPG) J172_02617 PF00270 DEAD/DEAH box helicase J172_02617 PF00271 Helicase conserved C-terminal domain J172_02617 PF08494 J172_02617 J172_02618 PF11743 J172_02618 J172_02620 PF04386 Stringent starvation protein B J172_02621 PF00043 Glutathione S-transferase, C-terminal domain J172_02621 PF13417 Glutathione S-transferase, N-terminal domain J172_02622 PF02167 Cytochrome C1 family J172_02623 PF00032 Cytochrome b(C-terminal)/b6/petD J172_02623 PF00033 Cytochrome b(N-terminal)/b6/petB J172_02624 PF00355 Rieske [2Fe-2S] domain J172_02624 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J172_02625 PF01464 Transglycosylase SLT domain J172_02626 PF08279 HTH domain J172_02626 PF13280 J172_02626 J172_02627 PF02798 Glutathione S-transferase, N-terminal domain J172_02628 PF00919 Uncharacterized protein family UPF0004 J172_02628 PF01938 TRAM domain J172_02628 PF04055 Radical SAM superfamily J172_02629 PF02562 PhoH-like protein J172_02631 PF02130 Uncharacterized protein family UPF0054 J172_02633 PF00571 CBS domain J172_02633 PF03471 Transporter associated domain J172_02634 PF13387 J172_02634 J172_02635 PF01544 CorA-like Mg2+ transporter protein J172_02636 PF00171 Aldehyde dehydrogenase family J172_02637 PF00528 Binding-protein-dependent transport system inner membrane component J172_02638 PF00528 Binding-protein-dependent transport system inner membrane component J172_02639 PF00005 ABC transporter J172_02639 PF08402 TOBE domain J172_02640 PF02321 Outer membrane efflux protein J172_02641 PF07690 Major Facilitator Superfamily J172_02642 PF13533 Biotin-lipoyl like J172_02642 PF16576 J172_02642 J172_02643 PF13416 Bacterial extracellular solute-binding protein J172_02644 PF00202 Aminotransferase class-III J172_02645 PF00120 Glutamine synthetase, catalytic domain J172_02646 PF07722 Peptidase C26 J172_02647 PF00120 Glutamine synthetase, catalytic domain J172_02648 PF01266 FAD dependent oxidoreductase J172_02649 PF00072 Response regulator receiver domain J172_02649 PF00990 GGDEF domain J172_02650 PF01814 Hemerythrin HHE cation binding domain J172_02651 PF00083 Sugar (and other) transporter J172_02651 PF07690 Major Facilitator Superfamily J172_02653 PF00384 Molybdopterin oxidoreductase J172_02653 PF01568 Molydopterin dinucleotide binding domain J172_02654 PF02634 FdhD/NarQ family J172_02655 PF07690 Major Facilitator Superfamily J172_02656 PF00202 Aminotransferase class-III J172_02658 PF04286 J172_02658 J172_02659 PF00072 Response regulator receiver domain J172_02659 PF00512 His Kinase A (phospho-acceptor) domain J172_02659 PF01627 Hpt domain J172_02659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02659 PF03924 CHASE domain J172_02659 PF13426 PAS domain J172_02660 PF00072 Response regulator receiver domain J172_02660 PF13487 HD domain J172_02661 PF07690 Major Facilitator Superfamily J172_02662 PF05088 J172_02662 J172_02662 PF12466 J172_02662 J172_02663 PF00440 Bacterial regulatory proteins, tetR family J172_02663 PF14246 AefR-like transcriptional repressor, C-terminal region J172_02664 PF16576 J172_02664 J172_02665 PF00873 AcrB/AcrD/AcrF family J172_02666 PF00356 Bacterial regulatory proteins, lacI family J172_02666 PF13377 Periplasmic binding protein-like domain J172_02667 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J172_02667 PF00381 PTS HPr component phosphorylation site J172_02667 PF00391 PEP-utilising enzyme, mobile domain J172_02667 PF02896 PEP-utilising enzyme, TIM barrel domain J172_02667 PF05524 PEP-utilising enzyme, N-terminal J172_02668 PF00294 pfkB family carbohydrate kinase J172_02669 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J172_02670 PF04966 Carbohydrate-selective porin, OprB family J172_02675 PF07791 J172_02675 J172_02677 PF02355 Protein export membrane protein J172_02677 PF07549 SecD/SecF GG Motif J172_02678 PF02355 Protein export membrane protein J172_02678 PF07549 SecD/SecF GG Motif J172_02678 PF13721 SecD export protein N-terminal TM region J172_02679 PF02699 Preprotein translocase subunit J172_02680 PF01702 Queuine tRNA-ribosyltransferase J172_02681 PF02547 Queuosine biosynthesis protein J172_02682 PF01037 AsnC family J172_02682 PF13412 Winged helix-turn-helix DNA-binding J172_02683 PF00202 Aminotransferase class-III J172_02684 PF04488 Glycosyltransferase sugar-binding region containing DXD motif J172_02686 PF00149 Calcineurin-like phosphoesterase J172_02686 PF16656 J172_02686 J172_02687 PF02333 Phytase J172_02688 PF00593 TonB dependent receptor J172_02688 PF07715 TonB-dependent Receptor Plug Domain J172_02689 PF14681 Uracil phosphoribosyltransferase J172_02690 PF00759 Glycosyl hydrolase family 9 J172_02690 PF02927 N-terminal ig-like domain of cellulase J172_02691 PF01019 Gamma-glutamyltranspeptidase J172_02692 PF00037 4Fe-4S binding domain J172_02695 PF01467 Cytidylyltransferase J172_02696 PF03602 Conserved hypothetical protein 95 J172_02697 PF00183 Hsp90 protein J172_02697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02698 PF05593 J172_02698 J172_02698 PF14220 J172_02698 J172_02700 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) J172_02701 PF00593 TonB dependent receptor J172_02701 PF07715 TonB-dependent Receptor Plug Domain J172_02702 PF00326 Prolyl oligopeptidase family J172_02702 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J172_02703 PF04616 Glycosyl hydrolases family 43 J172_02704 PF00754 F5/8 type C domain J172_02704 PF07532 J172_02704 J172_02705 PF00593 TonB dependent receptor J172_02705 PF07715 TonB-dependent Receptor Plug Domain J172_02707 PF00082 Subtilase family J172_02707 PF09286 Pro-kumamolisin, activation domain J172_02711 PF01301 Glycosyl hydrolases family 35 J172_02712 PF00326 Prolyl oligopeptidase family J172_02712 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J172_02713 PF13520 Amino acid permease J172_02714 PF05960 Bacterial protein of unknown function (DUF885) J172_02715 PF05960 Bacterial protein of unknown function (DUF885) J172_02716 PF00557 Metallopeptidase family M24 J172_02716 PF01321 Creatinase/Prolidase N-terminal domain J172_02717 PF00171 Aldehyde dehydrogenase family J172_02718 PF00701 Dihydrodipicolinate synthetase family J172_02719 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_02720 PF13510 2Fe-2S iron-sulfur cluster binding domain J172_02721 PF01266 FAD dependent oxidoreductase J172_02722 PF05544 Proline racemase J172_02723 PF08448 PAS fold J172_02723 PF12833 Helix-turn-helix domain J172_02724 PF00448 SRP54-type protein, GTPase domain J172_02724 PF02881 SRP54-type protein, helical bundle domain J172_02725 PF00633 Helix-hairpin-helix motif J172_02725 PF00730 HhH-GPD superfamily base excision DNA repair protein J172_02725 PF14815 NUDIX domain J172_02726 PF04362 Bacterial Fe(2+) trafficking J172_02727 PF00072 Response regulator receiver domain J172_02727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02727 PF13426 PAS domain J172_02729 PF10685 J172_02729 J172_02733 PF08212 Lipocalin-like domain J172_02734 PF03168 Late embryogenesis abundant protein J172_02735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_02735 PF02770 Acyl-CoA dehydrogenase, middle domain J172_02735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_02735 PF12418 J172_02735 J172_02735 PF12806 J172_02735 J172_02736 PF14279 J172_02736 J172_02737 PF02779 Transketolase, pyrimidine binding domain J172_02737 PF02780 Transketolase, C-terminal domain J172_02737 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J172_02738 PF04101 Glycosyltransferase family 28 C-terminal domain J172_02740 PF13506 Glycosyl transferase family 21 J172_02741 PF01370 NAD dependent epimerase/dehydratase family J172_02742 PF00753 Metallo-beta-lactamase superfamily J172_02743 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J172_02743 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J172_02744 PF01963 J172_02744 J172_02745 PF06172 Cupin superfamily (DUF985) J172_02746 PF03808 J172_02746 J172_02747 PF04230 J172_02747 J172_02749 PF13440 J172_02749 J172_02750 PF13692 Glycosyl transferases group 1 J172_02751 PF00534 Glycosyl transferases group 1 J172_02751 PF13439 Glycosyltransferase Family 4 J172_02752 PF01757 J172_02752 J172_02753 PF01757 J172_02753 J172_02755 PF02397 J172_02755 J172_02755 PF13727 CoA-binding domain J172_02756 PF02706 Chain length determinant protein J172_02756 PF13807 J172_02756 J172_02757 PF02563 Polysaccharide biosynthesis/export protein J172_02757 PF10531 SLBB domain J172_02759 PF13411 MerR HTH family regulatory protein J172_02760 PF00216 Bacterial DNA-binding protein J172_02761 PF01588 Putative tRNA binding domain J172_02761 PF03147 Ferredoxin-fold anticodon binding domain J172_02761 PF03483 B3/4 domain J172_02761 PF03484 tRNA synthetase B5 domain J172_02762 PF01409 tRNA synthetases class II core domain (F) J172_02762 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J172_02763 PF00453 Ribosomal protein L20 J172_02764 PF01632 Ribosomal protein L35 J172_02766 PF00707 Translation initiation factor IF-3, C-terminal domain J172_02766 PF05198 Translation initiation factor IF-3, N-terminal domain J172_02767 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J172_02767 PF02824 TGS domain J172_02767 PF03129 Anticodon binding domain J172_02767 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J172_02768 PF00356 Bacterial regulatory proteins, lacI family J172_02768 PF13377 Periplasmic binding protein-like domain J172_02769 PF00128 Alpha amylase, catalytic domain J172_02770 PF07690 Major Facilitator Superfamily J172_02771 PF06202 Amylo-alpha-1,6-glucosidase J172_02772 PF10566 Glycoside hydrolase 97 J172_02772 PF14508 Glycosyl-hydrolase 97 N-terminal J172_02772 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J172_02774 PF07715 TonB-dependent Receptor Plug Domain J172_02774 PF14905 Outer membrane protein beta-barrel family J172_02776 PF00128 Alpha amylase, catalytic domain J172_02778 PF01527 Transposase J172_02779 PF13683 J172_02779 J172_02780 PF07007 Protein of unknown function (DUF1311) J172_02781 PF04610 J172_02781 J172_02783 PF00182 Chitinase class I J172_02783 PF01471 Putative peptidoglycan binding domain J172_02785 PF04610 J172_02785 J172_02787 PF03135 J172_02787 J172_02788 PF05101 J172_02788 J172_02789 PF04956 J172_02789 J172_02790 PF01464 Transglycosylase SLT domain J172_02791 PF00437 Type II/IV secretion system protein J172_02792 PF03743 Bacterial conjugation TrbI-like protein J172_02793 PF03524 Conjugal transfer protein J172_02794 PF04335 VirB8 protein J172_02795 PF10671 Toxin co-regulated pilus biosynthesis protein Q J172_02796 PF02534 Type IV secretory system Conjugative DNA transfer J172_02799 PF00271 Helicase conserved C-terminal domain J172_02799 PF02151 UvrB/uvrC motif J172_02799 PF04851 Type III restriction enzyme, res subunit J172_02799 PF12344 Ultra-violet resistance protein B J172_02807 PF01527 Transposase J172_02808 PF00665 Integrase core domain J172_02808 PF13276 J172_02808 J172_02811 PF07791 J172_02811 J172_02816 PF01555 DNA methylase J172_02817 PF04860 Phage portal protein J172_02818 PF03237 Terminase-like family J172_02818 PF06056 Putative ATPase subunit of terminase (gpP-like) J172_02818 PF17289 J172_02818 J172_02819 PF05929 J172_02819 J172_02820 PF05125 J172_02820 J172_02821 PF05944 J172_02821 J172_02822 PF05926 J172_02822 J172_02823 PF05489 Phage Tail Protein X J172_02824 PF16931 J172_02824 J172_02825 PF05449 J172_02825 J172_02828 PF06891 J172_02828 J172_02829 PF05069 J172_02829 J172_02830 PF04865 J172_02830 J172_02831 PF09684 J172_02831 J172_02835 PF04717 Phage-related baseplate assembly protein J172_02836 PF00665 Integrase core domain J172_02836 PF13276 J172_02836 J172_02837 PF01527 Transposase J172_02838 PF07963 Prokaryotic N-terminal methylation motif J172_02838 PF16732 J172_02838 J172_02839 PF05567 Neisseria PilC beta-propeller domain J172_02840 PF07963 Prokaryotic N-terminal methylation motif J172_02840 PF16074 J172_02840 J172_02841 PF07963 Prokaryotic N-terminal methylation motif J172_02841 PF12019 Type II transport protein GspH J172_02842 PF06580 J172_02842 J172_02843 PF03641 Possible lysine decarboxylase J172_02843 PF11892 Domain of unknown function (DUF3412) J172_02843 PF14793 Domain of unknown function (DUF4478) J172_02844 PF07715 TonB-dependent Receptor Plug Domain J172_02844 PF13620 Carboxypeptidase regulatory-like domain J172_02845 PF01914 J172_02845 J172_02846 PF00106 short chain dehydrogenase J172_02847 PF00462 Glutaredoxin J172_02848 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J172_02848 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J172_02849 PF02222 ATP-grasp domain J172_02850 PF00731 AIR carboxylase J172_02851 PF03966 Trm112p-like protein J172_02852 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J172_02852 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J172_02853 PF10030 J172_02853 J172_02854 PF00013 KH domain J172_02854 PF00575 S1 RNA binding domain J172_02854 PF01138 3' exoribonuclease family, domain 1 J172_02854 PF03725 3' exoribonuclease family, domain 2 J172_02854 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J172_02855 PF00312 Ribosomal protein S15 J172_02856 PF01509 TruB family pseudouridylate synthase (N terminal domain) J172_02856 PF09157 Pseudouridine synthase II TruB, C-terminal J172_02856 PF16198 J172_02856 J172_02857 PF02033 Ribosome-binding factor A J172_02858 PF00009 Elongation factor Tu GTP binding domain J172_02858 PF04760 Translation initiation factor IF-2, N-terminal region J172_02858 PF08364 J172_02858 J172_02858 PF11987 Translation-initiation factor 2 J172_02859 PF00575 S1 RNA binding domain J172_02859 PF08529 NusA N-terminal domain J172_02859 PF13184 NusA-like KH domain J172_02859 PF14520 Helix-hairpin-helix domain J172_02860 PF02576 Uncharacterised BCR, YhbC family COG0779 J172_02860 PF17384 J172_02860 J172_02862 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_02863 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_02864 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains J172_02864 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J172_02865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J172_02866 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J172_02867 PF12838 4Fe-4S dicluster domain J172_02868 PF00146 NADH dehydrogenase J172_02869 PF00384 Molybdopterin oxidoreductase J172_02869 PF01568 Molydopterin dinucleotide binding domain J172_02869 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J172_02869 PF13510 2Fe-2S iron-sulfur cluster binding domain J172_02870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J172_02870 PF10531 SLBB domain J172_02870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J172_02871 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin J172_02872 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J172_02873 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J172_02874 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J172_02875 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J172_02877 PF03840 Preprotein translocase SecG subunit J172_02878 PF00121 Triosephosphate isomerase J172_02879 PF00106 short chain dehydrogenase J172_02880 PF01152 Bacterial-like globin J172_02881 PF11231 J172_02881 J172_02882 PF00563 EAL domain J172_02882 PF00672 HAMP domain J172_02882 PF00990 GGDEF domain J172_02882 PF14827 Sensory domain of two-component sensor kinase J172_02884 PF03171 2OG-Fe(II) oxygenase superfamily J172_02884 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J172_02885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J172_02885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J172_02885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J172_02885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J172_02886 PF01039 Carboxyl transferase domain J172_02887 PF00290 Tryptophan synthase alpha chain J172_02889 PF00291 Pyridoxal-phosphate dependent enzyme J172_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_02890 PF03466 LysR substrate binding domain J172_02891 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J172_02892 PF01416 tRNA pseudouridine synthase J172_02894 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_02896 PF01118 Semialdehyde dehydrogenase, NAD binding domain J172_02896 PF02774 Semialdehyde dehydrogenase, dimerisation domain J172_02897 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J172_02897 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J172_02898 PF01264 Chorismate synthase J172_02899 PF05175 Methyltransferase small domain J172_02900 PF02630 SCO1/SenC J172_02901 PF02666 J172_02901 J172_02902 PF01464 Transglycosylase SLT domain J172_02902 PF01476 LysM domain J172_02903 PF05872 J172_02903 J172_02904 PF00293 NUDIX domain J172_02906 PF01694 Rhomboid family J172_02907 PF01272 Transcription elongation factor, GreA/GreB, C-term J172_02907 PF03449 Transcription elongation factor, N-terminal J172_02908 PF00919 Uncharacterized protein family UPF0004 J172_02908 PF04055 Radical SAM superfamily J172_02909 PF01738 Dienelactone hydrolase family J172_02910 PF01230 HIT domain J172_02913 PF00692 dUTPase J172_02914 PF10609 ParA/MinD ATPase like J172_02915 PF00593 TonB dependent receptor J172_02915 PF07715 TonB-dependent Receptor Plug Domain J172_02916 PF00593 TonB dependent receptor J172_02916 PF07715 TonB-dependent Receptor Plug Domain J172_02917 PF01593 Flavin containing amine oxidoreductase J172_02918 PF01431 Peptidase family M13 J172_02918 PF05649 Peptidase family M13 J172_02919 PF01431 Peptidase family M13 J172_02919 PF05649 Peptidase family M13 J172_02920 PF01431 Peptidase family M13 J172_02920 PF05649 Peptidase family M13 J172_02921 PF01694 Rhomboid family J172_02922 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J172_02923 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J172_02923 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_02924 PF01266 FAD dependent oxidoreductase J172_02925 PF04235 J172_02925 J172_02926 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J172_02927 PF00877 NlpC/P60 family J172_02928 PF00877 NlpC/P60 family J172_02929 PF03061 Thioesterase superfamily J172_02930 PF13649 Methyltransferase domain J172_02931 PF00375 Sodium:dicarboxylate symporter family J172_02932 PF00245 Alkaline phosphatase J172_02933 PF01171 PP-loop family J172_02933 PF09179 TilS substrate binding domain J172_02933 PF11734 TilS substrate C-terminal domain J172_02934 PF02609 Exonuclease VII small subunit J172_02935 PF00348 Polyprenyl synthetase J172_02936 PF14521 Lysine-specific metallo-endopeptidase J172_02937 PF09685 J172_02937 J172_02938 PF01523 Putative modulator of DNA gyrase J172_02939 PF04751 Protein of unknown function (DUF615) J172_02940 PF01523 Putative modulator of DNA gyrase J172_02942 PF13116 J172_02942 J172_02942 PF13502 J172_02942 J172_02943 PF10150 Ribonuclease E/G family J172_02944 PF02545 Maf-like protein J172_02945 PF04402 Protein of unknown function (DUF541) J172_02946 PF00593 TonB dependent receptor J172_02946 PF07715 TonB-dependent Receptor Plug Domain J172_02946 PF13620 Carboxypeptidase regulatory-like domain J172_02947 PF03544 Gram-negative bacterial TonB protein C-terminal J172_02948 PF02590 Predicted SPOUT methyltransferase J172_02949 PF05787 Bacterial protein of unknown function (DUF839) J172_02949 PF10518 TAT (twin-arginine translocation) pathway signal sequence J172_02950 PF02410 Oligomerisation domain J172_02951 PF01467 Cytidylyltransferase J172_02952 PF06144 DNA polymerase III, delta subunit J172_02953 PF04390 Lipopolysaccharide-assembly J172_02954 PF00133 tRNA synthetases class I (I, L, M and V) J172_02954 PF08264 Anticodon-binding domain of tRNA J172_02954 PF13603 Leucyl-tRNA synthetase, Domain 2 J172_02955 PF06197 J172_02955 J172_02956 PF00085 Thioredoxin J172_02956 PF14559 Tetratricopeptide repeat J172_02956 PF14561 Tetratricopeptide repeat J172_02957 PF14539 Domain of unknown function (DUF4442) J172_02961 PF04070 J172_02961 J172_02962 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J172_02963 PF00892 EamA-like transporter family J172_02964 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_02964 PF03466 LysR substrate binding domain J172_02966 PF14257 J172_02966 J172_02968 PF05960 Bacterial protein of unknown function (DUF885) J172_02969 PF00005 ABC transporter J172_02969 PF00664 ABC transporter transmembrane region J172_02970 PF07929 Plasmid pRiA4b ORF-3-like protein J172_02972 PF00873 AcrB/AcrD/AcrF family J172_02973 PF16576 J172_02973 J172_02974 PF06629 J172_02974 J172_02975 PF02321 Outer membrane efflux protein J172_02976 PF00072 Response regulator receiver domain J172_02976 PF00486 Transcriptional regulatory protein, C terminal J172_02977 PF00512 His Kinase A (phospho-acceptor) domain J172_02977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_02978 PF00999 Sodium/hydrogen exchanger family J172_02979 PF00144 Beta-lactamase J172_02979 PF11954 J172_02979 J172_02980 PF03737 Demethylmenaquinone methyltransferase J172_02981 PF01904 Protein of unknown function DUF72 J172_02982 PF00892 EamA-like transporter family J172_02983 PF00990 GGDEF domain J172_02983 PF01590 GAF domain J172_02984 PF00849 RNA pseudouridylate synthase J172_02984 PF01479 S4 domain J172_02985 PF00563 EAL domain J172_02985 PF00990 GGDEF domain J172_02985 PF08447 PAS fold J172_02986 PF00270 DEAD/DEAH box helicase J172_02986 PF00271 Helicase conserved C-terminal domain J172_02986 PF03880 DbpA RNA binding domain J172_02987 PF04542 Sigma-70 region 2 J172_02987 PF08281 Sigma-70, region 4 J172_02989 PF13275 S4 domain J172_02991 PF01124 MAPEG family J172_02992 PF13211 J172_02992 J172_02995 PF00730 HhH-GPD superfamily base excision DNA repair protein J172_02995 PF02805 Metal binding domain of Ada J172_02995 PF06029 AlkA N-terminal domain J172_02995 PF12833 Helix-turn-helix domain J172_02996 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J172_02996 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J172_02997 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase J172_02998 PF00654 Voltage gated chloride channel J172_02999 PF00107 Zinc-binding dehydrogenase J172_02999 PF08240 Alcohol dehydrogenase GroES-like domain J172_03000 PF17067 J172_03000 J172_03001 PF03203 J172_03001 J172_03002 PF00593 TonB dependent receptor J172_03002 PF07715 TonB-dependent Receptor Plug Domain J172_03003 PF00593 TonB dependent receptor J172_03003 PF07715 TonB-dependent Receptor Plug Domain J172_03004 PF00082 Subtilase family J172_03004 PF01483 Proprotein convertase P-domain J172_03007 PF00082 Subtilase family J172_03007 PF01483 Proprotein convertase P-domain J172_03009 PF00248 Aldo/keto reductase family J172_03010 PF07690 Major Facilitator Superfamily J172_03011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03011 PF03466 LysR substrate binding domain J172_03013 PF06719 J172_03013 J172_03013 PF12833 Helix-turn-helix domain J172_03014 PF07883 Cupin domain J172_03015 PF00440 Bacterial regulatory proteins, tetR family J172_03016 PF02321 Outer membrane efflux protein J172_03017 PF00873 AcrB/AcrD/AcrF family J172_03018 PF00529 HlyD family secretion protein J172_03018 PF16576 J172_03018 J172_03019 PF00440 Bacterial regulatory proteins, tetR family J172_03019 PF14246 AefR-like transcriptional repressor, C-terminal region J172_03020 PF01475 Ferric uptake regulator family J172_03021 PF00749 tRNA synthetases class I (E and Q), catalytic domain J172_03022 PF12275 J172_03022 J172_03023 PF00795 Carbon-nitrogen hydrolase J172_03026 PF06123 J172_03026 J172_03027 PF00112 Papain family cysteine protease J172_03028 PF00512 His Kinase A (phospho-acceptor) domain J172_03028 PF00672 HAMP domain J172_03028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03029 PF00072 Response regulator receiver domain J172_03029 PF00486 Transcriptional regulatory protein, C terminal J172_03030 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ J172_03031 PF13302 Acetyltransferase (GNAT) domain J172_03032 PF00270 DEAD/DEAH box helicase J172_03032 PF00271 Helicase conserved C-terminal domain J172_03032 PF02559 CarD-like/TRCF domain J172_03032 PF03461 TRCF domain J172_03035 PF14412 J172_03035 J172_03036 PF07791 J172_03036 J172_03037 PF08845 J172_03037 J172_03038 PF13466 STAS domain J172_03039 PF01584 CheW-like domain J172_03039 PF01627 Hpt domain J172_03039 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03039 PF02895 Signal transducing histidine kinase, homodimeric domain J172_03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03041 PF01584 CheW-like domain J172_03042 PF00072 Response regulator receiver domain J172_03042 PF00563 EAL domain J172_03043 PF01739 CheR methyltransferase, SAM binding domain J172_03043 PF03705 CheR methyltransferase, all-alpha domain J172_03044 PF00072 Response regulator receiver domain J172_03044 PF01339 CheB methylesterase J172_03045 PF13091 PLD-like domain J172_03046 PF01431 Peptidase family M13 J172_03046 PF05649 Peptidase family M13 J172_03048 PF00300 Histidine phosphatase superfamily (branch 1) J172_03049 PF04493 Endonuclease V J172_03051 PF02678 Pirin J172_03051 PF05726 Pirin C-terminal cupin domain J172_03053 PF02566 OsmC-like protein J172_03054 PF02678 Pirin J172_03054 PF05726 Pirin C-terminal cupin domain J172_03055 PF02554 J172_03055 J172_03055 PF13722 J172_03055 J172_03056 PF04328 J172_03056 J172_03057 PF13419 Haloacid dehalogenase-like hydrolase J172_03058 PF12796 Ankyrin repeats (3 copies) J172_03059 PF11187 Protein of unknown function (DUF2974) J172_03060 PF05684 J172_03060 J172_03063 PF12804 MobA-like NTP transferase domain J172_03064 PF00665 Integrase core domain J172_03065 PF01527 Transposase J172_03066 PF13478 XdhC Rossmann domain J172_03067 PF02625 XdhC and CoxI family J172_03068 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J172_03068 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J172_03069 PF00941 FAD binding domain in molybdopterin dehydrogenase J172_03069 PF03450 CO dehydrogenase flavoprotein C-terminal domain J172_03070 PF00111 2Fe-2S iron-sulfur cluster binding domain J172_03070 PF01799 [2Fe-2S] binding domain J172_03071 PF00107 Zinc-binding dehydrogenase J172_03071 PF08240 Alcohol dehydrogenase GroES-like domain J172_03072 PF00990 GGDEF domain J172_03072 PF02743 Cache domain J172_03073 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J172_03073 PF04851 Type III restriction enzyme, res subunit J172_03075 PF02384 N-6 DNA Methylase J172_03075 PF12161 HsdM N-terminal domain J172_03079 PF00589 Phage integrase family J172_03080 PF00589 Phage integrase family J172_03081 PF00436 Single-strand binding protein family J172_03082 PF00348 Polyprenyl synthetase J172_03083 PF01738 Dienelactone hydrolase family J172_03084 PF02875 Mur ligase family, glutamate ligase domain J172_03084 PF08245 Mur ligase middle domain J172_03087 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J172_03087 PF00696 Amino acid kinase family J172_03087 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J172_03088 PF02567 Phenazine biosynthesis-like protein J172_03089 PF02567 Phenazine biosynthesis-like protein J172_03090 PF05433 J172_03090 J172_03091 PF02566 OsmC-like protein J172_03092 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J172_03092 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J172_03093 PF03652 Uncharacterised protein family (UPF0081) J172_03094 PF02622 Uncharacterized ACR, COG1678 J172_03095 PF03352 Methyladenine glycosylase J172_03096 PF01904 Protein of unknown function DUF72 J172_03098 PF03211 Pectate lyase J172_03099 PF00437 Type II/IV secretion system protein J172_03100 PF00437 Type II/IV secretion system protein J172_03101 PF01168 Alanine racemase, N-terminal domain J172_03102 PF03807 NADP oxidoreductase coenzyme F420-dependent J172_03102 PF14748 Pyrroline-5-carboxylate reductase dimerisation J172_03103 PF00216 Bacterial DNA-binding protein J172_03104 PF01551 Peptidase family M23 J172_03105 PF12977 Domain of Unknown Function with PDB structure (DUF3861) J172_03107 PF07273 Protein of unknown function (DUF1439) J172_03108 PF01965 DJ-1/PfpI family J172_03109 PF00856 SET domain J172_03110 PF02082 Transcriptional regulator J172_03111 PF01458 Uncharacterized protein family (UPF0051) J172_03112 PF00005 ABC transporter J172_03113 PF01458 Uncharacterized protein family (UPF0051) J172_03114 PF00266 Aminotransferase class-V J172_03115 PF13673 Acetyltransferase (GNAT) domain J172_03116 PF00355 Rieske [2Fe-2S] domain J172_03117 PF00593 TonB dependent receptor J172_03117 PF07715 TonB-dependent Receptor Plug Domain J172_03118 PF13640 2OG-Fe(II) oxygenase superfamily J172_03119 PF08238 Sel1 repeat J172_03120 PF16357 J172_03120 J172_03121 PF10029 J172_03121 J172_03122 PF10670 J172_03122 J172_03123 PF02424 ApbE family J172_03124 PF00175 Oxidoreductase NAD-binding domain J172_03124 PF00258 Flavodoxin J172_03125 PF13202 EF hand J172_03125 PF13499 EF-hand domain pair J172_03126 PF05962 HutD J172_03127 PF12836 Helix-hairpin-helix motif J172_03128 PF01546 Peptidase family M20/M25/M40 J172_03128 PF07687 Peptidase dimerisation domain J172_03129 PF04226 J172_03129 J172_03130 PF01636 Phosphotransferase enzyme family J172_03131 PF00483 Nucleotidyl transferase J172_03132 PF00308 Bacterial dnaA protein J172_03133 PF01594 J172_03133 J172_03134 PF09839 J172_03134 J172_03135 PF00586 AIR synthase related protein, N-terminal domain J172_03135 PF02769 AIR synthase related protein, C-terminal domain J172_03137 PF00551 Formyl transferase J172_03138 PF11306 Protein of unknown function (DUF3108) J172_03139 PF11306 Protein of unknown function (DUF3108) J172_03141 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J172_03142 PF01722 BolA-like protein J172_03143 PF00571 CBS domain J172_03143 PF01380 SIS domain J172_03144 PF08282 haloacid dehalogenase-like hydrolase J172_03145 PF06835 Lipopolysaccharide-assembly, LptC-related J172_03146 PF03968 OstA-like protein J172_03147 PF00005 ABC transporter J172_03147 PF12399 Branched-chain amino acid ATP-binding cassette transporter J172_03148 PF00309 J172_03148 J172_03148 PF04552 Sigma-54, DNA binding domain J172_03148 PF04963 Sigma-54 factor, core binding domain J172_03149 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J172_03150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J172_03151 PF02603 HPr Serine kinase N terminus J172_03151 PF07475 HPr Serine kinase C-terminal domain J172_03152 PF03668 J172_03152 J172_03153 PF03610 PTS system fructose IIA component J172_03154 PF00381 PTS HPr component phosphorylation site J172_03155 PF00391 PEP-utilising enzyme, mobile domain J172_03155 PF02896 PEP-utilising enzyme, TIM barrel domain J172_03155 PF05524 PEP-utilising enzyme, N-terminal J172_03156 PF00571 CBS domain J172_03156 PF01769 Divalent cation transporter J172_03156 PF03448 MgtE intracellular N domain J172_03157 PF00326 Prolyl oligopeptidase family J172_03158 PF02322 J172_03158 J172_03159 PF01654 J172_03159 J172_03160 PF01244 Membrane dipeptidase (Peptidase family M19) J172_03161 PF00324 Amino acid permease J172_03162 PF00544 Pectate lyase J172_03163 PF00561 alpha/beta hydrolase fold J172_03164 PF00196 Bacterial regulatory proteins, luxR family J172_03164 PF03472 Autoinducer binding domain J172_03165 PF13520 Amino acid permease J172_03166 PF01764 Lipase (class 3) J172_03168 PF13365 Trypsin-like peptidase domain J172_03170 PF12706 Beta-lactamase superfamily domain J172_03171 PF04820 Tryptophan halogenase J172_03172 PF13621 Cupin-like domain J172_03173 PF07277 J172_03173 J172_03174 PF00593 TonB dependent receptor J172_03174 PF07715 TonB-dependent Receptor Plug Domain J172_03175 PF01433 Peptidase family M1 J172_03176 PF00376 MerR family regulatory protein J172_03176 PF09278 MerR, DNA binding J172_03177 PF07690 Major Facilitator Superfamily J172_03179 PF03738 Glutathionylspermidine synthase preATP-grasp J172_03180 PF06693 J172_03180 J172_03181 PF03994 J172_03181 J172_03182 PF10679 J172_03182 J172_03183 PF07885 Ion channel J172_03184 PF04012 J172_03184 J172_03185 PF09938 J172_03185 J172_03186 PF01243 Pyridoxamine 5'-phosphate oxidase J172_03186 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J172_03187 PF01202 Shikimate kinase J172_03188 PF01761 3-dehydroquinate synthase J172_03190 PF01208 Uroporphyrinogen decarboxylase (URO-D) J172_03191 PF11747 J172_03191 J172_03192 PF11747 J172_03192 J172_03193 PF11747 J172_03193 J172_03194 PF11747 J172_03194 J172_03196 PF11747 J172_03196 J172_03200 PF08924 Domain of unknown function (DUF1906) J172_03203 PF12833 Helix-turn-helix domain J172_03203 PF14532 Sigma-54 interaction domain J172_03204 PF07690 Major Facilitator Superfamily J172_03205 PF00072 Response regulator receiver domain J172_03205 PF00512 His Kinase A (phospho-acceptor) domain J172_03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03205 PF07494 Two component regulator propeller J172_03205 PF07495 Y_Y_Y domain J172_03206 PF00072 Response regulator receiver domain J172_03206 PF00512 His Kinase A (phospho-acceptor) domain J172_03206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03206 PF07494 Two component regulator propeller J172_03206 PF07495 Y_Y_Y domain J172_03208 PF00072 Response regulator receiver domain J172_03208 PF00512 His Kinase A (phospho-acceptor) domain J172_03208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03208 PF07494 Two component regulator propeller J172_03208 PF07495 Y_Y_Y domain J172_03209 PF04264 YceI-like domain J172_03210 PF01292 Prokaryotic cytochrome b561 J172_03211 PF04264 YceI-like domain J172_03212 PF05768 Glutaredoxin-like domain (DUF836) J172_03213 PF03313 J172_03213 J172_03213 PF03315 Serine dehydratase beta chain J172_03214 PF00561 alpha/beta hydrolase fold J172_03215 PF00742 Homoserine dehydrogenase J172_03215 PF03447 Homoserine dehydrogenase, NAD binding domain J172_03216 PF01053 Cys/Met metabolism PLP-dependent enzyme J172_03217 PF00561 alpha/beta hydrolase fold J172_03219 PF01551 Peptidase family M23 J172_03220 PF00009 Elongation factor Tu GTP binding domain J172_03220 PF16658 J172_03220 J172_03221 PF03006 J172_03221 J172_03222 PF05170 J172_03222 J172_03223 PF00571 CBS domain J172_03224 PF00535 Glycosyl transferase family 2 J172_03225 PF00912 Transglycosylase J172_03226 PF01430 Hsp33 protein J172_03228 PF00593 TonB dependent receptor J172_03228 PF07715 TonB-dependent Receptor Plug Domain J172_03229 PF13181 Tetratricopeptide repeat J172_03229 PF13469 Sulfotransferase family J172_03230 PF00440 Bacterial regulatory proteins, tetR family J172_03231 PF12146 Putative lysophospholipase J172_03232 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J172_03232 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J172_03232 PF09317 J172_03232 J172_03233 PF06993 J172_03233 J172_03234 PF07690 Major Facilitator Superfamily J172_03235 PF00144 Beta-lactamase J172_03237 PF01597 Glycine cleavage H-protein J172_03238 PF01571 Aminomethyltransferase folate-binding domain J172_03238 PF08669 Glycine cleavage T-protein C-terminal barrel domain J172_03239 PF01957 NfeD-like C-terminal, partner-binding J172_03240 PF16200 J172_03240 J172_03241 PF02694 J172_03241 J172_03242 PF03819 MazG nucleotide pyrophosphohydrolase domain J172_03243 PF00459 Inositol monophosphatase family J172_03244 PF00293 NUDIX domain J172_03245 PF00202 Aminotransferase class-III J172_03246 PF04452 RNA methyltransferase J172_03247 PF02685 Glucokinase J172_03248 PF00593 TonB dependent receptor J172_03248 PF07715 TonB-dependent Receptor Plug Domain J172_03249 PF01120 Alpha-L-fucosidase J172_03249 PF16757 J172_03249 J172_03250 PF00704 Glycosyl hydrolases family 18 J172_03251 PF00728 Glycosyl hydrolase family 20, catalytic domain J172_03251 PF02838 Glycosyl hydrolase family 20, domain 2 J172_03251 PF13290 J172_03251 J172_03252 PF00703 Glycosyl hydrolases family 2 J172_03253 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_03253 PF01915 Glycosyl hydrolase family 3 C-terminal domain J172_03253 PF07691 PA14 domain J172_03253 PF14310 Fibronectin type III-like domain J172_03254 PF00593 TonB dependent receptor J172_03254 PF07715 TonB-dependent Receptor Plug Domain J172_03254 PF13620 Carboxypeptidase regulatory-like domain J172_03255 PF01301 Glycosyl hydrolases family 35 J172_03256 PF13520 Amino acid permease J172_03257 PF00294 pfkB family carbohydrate kinase J172_03258 PF02056 Family 4 glycosyl hydrolase J172_03258 PF11975 Family 4 glycosyl hydrolase C-terminal domain J172_03259 PF06824 Protein of unknown function (DUF1237) J172_03260 PF07971 Glycosyl hydrolase family 92 J172_03261 PF01301 Glycosyl hydrolases family 35 J172_03264 PF11747 J172_03264 J172_03265 PF13088 BNR repeat-like domain J172_03266 PF13855 Leucine rich repeat J172_03267 PF03932 CutC family J172_03268 PF01112 Asparaginase J172_03269 PF13302 Acetyltransferase (GNAT) domain J172_03270 PF01584 CheW-like domain J172_03271 PF01339 CheB methylesterase J172_03272 PF00072 Response regulator receiver domain J172_03272 PF01584 CheW-like domain J172_03272 PF01627 Hpt domain J172_03272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03272 PF02895 Signal transducing histidine kinase, homodimeric domain J172_03273 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03274 PF01584 CheW-like domain J172_03275 PF00072 Response regulator receiver domain J172_03276 PF00072 Response regulator receiver domain J172_03277 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J172_03277 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J172_03278 PF03544 Gram-negative bacterial TonB protein C-terminal J172_03279 PF03747 ADP-ribosylglycohydrolase J172_03280 PF00814 Glycoprotease family J172_03281 PF13307 Helicase C-terminal domain J172_03283 PF00905 Penicillin binding protein transpeptidase domain J172_03283 PF00912 Transglycosylase J172_03283 PF14814 Bifunctional transglycosylase second domain J172_03284 PF00535 Glycosyl transferase family 2 J172_03284 PF13692 Glycosyl transferases group 1 J172_03286 PF02824 TGS domain J172_03286 PF04607 Region found in RelA / SpoT proteins J172_03286 PF13291 ACT domain J172_03286 PF13328 HD domain J172_03287 PF12706 Beta-lactamase superfamily domain J172_03288 PF03070 TENA/THI-4/PQQC family J172_03289 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J172_03290 PF04055 Radical SAM superfamily J172_03290 PF13186 Iron-sulfur cluster-binding domain J172_03290 PF13353 4Fe-4S single cluster domain J172_03292 PF10142 PhoPQ-activated pathogenicity-related protein J172_03293 PF02685 Glucokinase J172_03294 PF00593 TonB dependent receptor J172_03294 PF07715 TonB-dependent Receptor Plug Domain J172_03295 PF00270 DEAD/DEAH box helicase J172_03295 PF00271 Helicase conserved C-terminal domain J172_03295 PF04408 Helicase associated domain (HA2) J172_03295 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J172_03295 PF11898 J172_03295 J172_03296 PF00210 Ferritin-like domain J172_03297 PF00270 DEAD/DEAH box helicase J172_03297 PF00271 Helicase conserved C-terminal domain J172_03297 PF00570 HRDC domain J172_03297 PF09382 RQC domain J172_03297 PF16124 J172_03297 J172_03299 PF00072 Response regulator receiver domain J172_03302 PF01479 S4 domain J172_03304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03304 PF00672 HAMP domain J172_03304 PF12729 J172_03304 J172_03305 PF01810 J172_03305 J172_03306 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03306 PF03466 LysR substrate binding domain J172_03307 PF00072 Response regulator receiver domain J172_03308 PF07536 J172_03308 J172_03308 PF08448 PAS fold J172_03309 PF06508 Queuosine biosynthesis protein QueC J172_03311 PF04055 Radical SAM superfamily J172_03311 PF13394 4Fe-4S single cluster domain J172_03312 PF13525 Outer membrane lipoprotein J172_03312 PF16331 J172_03312 J172_03313 PF00691 OmpA family J172_03314 PF04052 TolB amino-terminal domain J172_03314 PF07676 WD40-like Beta Propeller Repeat J172_03315 PF13103 TonB C terminal J172_03316 PF02472 Biopolymer transport protein ExbD/TolR J172_03317 PF01618 J172_03317 J172_03318 PF03061 Thioesterase superfamily J172_03319 PF05491 Holliday junction DNA helicase ruvB C-terminus J172_03319 PF05496 Holliday junction DNA helicase ruvB N-terminus J172_03321 PF02705 J172_03321 J172_03322 PF01330 RuvA N terminal domain J172_03322 PF07499 RuvA, C-terminal domain J172_03322 PF14520 Helix-hairpin-helix domain J172_03323 PF02075 Crossover junction endodeoxyribonuclease RuvC J172_03324 PF01709 Transcriptional regulator J172_03326 PF00583 Acetyltransferase (GNAT) family J172_03327 PF00152 tRNA synthetases class II (D, K and N) J172_03327 PF01336 OB-fold nucleic acid binding domain J172_03327 PF02938 GAD domain J172_03328 PF11218 J172_03328 J172_03329 PF09723 J172_03329 J172_03330 PF07690 Major Facilitator Superfamily J172_03331 PF00593 TonB dependent receptor J172_03331 PF07715 TonB-dependent Receptor Plug Domain J172_03333 PF04185 Phosphoesterase family J172_03333 PF05506 J172_03333 J172_03335 PF13354 Beta-lactamase enzyme family J172_03336 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03336 PF03466 LysR substrate binding domain J172_03337 PF14317 J172_03337 J172_03338 PF00005 ABC transporter J172_03338 PF12848 ABC transporter J172_03338 PF16326 J172_03338 J172_03339 PF00593 TonB dependent receptor J172_03339 PF07715 TonB-dependent Receptor Plug Domain J172_03340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_03341 PF00593 TonB dependent receptor J172_03341 PF07715 TonB-dependent Receptor Plug Domain J172_03342 PF00593 TonB dependent receptor J172_03342 PF07715 TonB-dependent Receptor Plug Domain J172_03343 PF00067 Cytochrome P450 J172_03344 PF00999 Sodium/hydrogen exchanger family J172_03344 PF02254 TrkA-N domain J172_03348 PF03328 HpcH/HpaI aldolase/citrate lyase family J172_03349 PF00593 TonB dependent receptor J172_03349 PF07715 TonB-dependent Receptor Plug Domain J172_03350 PF02655 ATP-grasp domain J172_03351 PF04183 IucA / IucC family J172_03351 PF06276 Ferric iron reductase FhuF-like transporter J172_03352 PF07690 Major Facilitator Superfamily J172_03353 PF04183 IucA / IucC family J172_03353 PF06276 Ferric iron reductase FhuF-like transporter J172_03354 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J172_03354 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J172_03357 PF02654 J172_03357 J172_03358 PF00300 Histidine phosphatase superfamily (branch 1) J172_03359 PF02277 Phosphoribosyltransferase J172_03360 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J172_03361 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J172_03361 PF07685 CobB/CobQ-like glutamine amidotransferase domain J172_03362 PF00155 Aminotransferase class I and II J172_03363 PF03186 J172_03363 J172_03364 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J172_03364 PF12557 Cob(I)alamin adenosyltransferase N terminal J172_03367 PF00593 TonB dependent receptor J172_03367 PF07715 TonB-dependent Receptor Plug Domain J172_03369 PF00004 ATPase family associated with various cellular activities (AAA) J172_03369 PF02861 Clp amino terminal domain J172_03369 PF07724 AAA domain (Cdc48 subfamily) J172_03369 PF10431 C-terminal, D2-small domain, of ClpB protein J172_03370 PF00005 ABC transporter J172_03371 PF00528 Binding-protein-dependent transport system inner membrane component J172_03372 PF09084 NMT1/THI5 like J172_03373 PF00248 Aldo/keto reductase family J172_03374 PF00296 Luciferase-like monooxygenase J172_03375 PF00593 TonB dependent receptor J172_03375 PF07715 TonB-dependent Receptor Plug Domain J172_03376 PF01541 GIY-YIG catalytic domain J172_03377 PF14497 Glutathione S-transferase, C-terminal domain J172_03378 PF11219 J172_03378 J172_03379 PF07007 Protein of unknown function (DUF1311) J172_03382 PF12098 J172_03382 J172_03383 PF00593 TonB dependent receptor J172_03383 PF07715 TonB-dependent Receptor Plug Domain J172_03384 PF02358 Trehalose-phosphatase J172_03385 PF00723 Glycosyl hydrolases family 15 J172_03386 PF00982 Glycosyltransferase family 20 J172_03387 PF01011 PQQ enzyme repeat J172_03387 PF13360 PQQ-like domain J172_03388 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03389 PF04134 J172_03389 J172_03390 PF13761 J172_03390 J172_03391 PF02578 Multi-copper polyphenol oxidoreductase laccase J172_03392 PF00849 RNA pseudouridylate synthase J172_03393 PF13525 Outer membrane lipoprotein J172_03395 PF00795 Carbon-nitrogen hydrolase J172_03395 PF02540 NAD synthase J172_03396 PF04480 Protein of unknown function (DUF559) J172_03397 PF01527 Transposase J172_03398 PF00665 Integrase core domain J172_03398 PF13276 J172_03398 J172_03401 PF01471 Putative peptidoglycan binding domain J172_03401 PF13406 Transglycosylase SLT domain J172_03402 PF01526 J172_03402 J172_03402 PF13700 J172_03402 J172_03403 PF00589 Phage integrase family J172_03405 PF11740 J172_03405 J172_03406 PF01129 NAD:arginine ADP-ribosyltransferase J172_03409 PF12760 Transposase zinc-ribbon domain J172_03409 PF12762 J172_03409 J172_03411 PF00549 CoA-ligase J172_03411 PF02629 CoA binding domain J172_03412 PF00549 CoA-ligase J172_03412 PF08442 ATP-grasp domain J172_03413 PF00512 His Kinase A (phospho-acceptor) domain J172_03413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03414 PF00072 Response regulator receiver domain J172_03414 PF00158 Sigma-54 interaction domain J172_03414 PF02954 Bacterial regulatory protein, Fis family J172_03418 PF00437 Type II/IV secretion system protein J172_03418 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J172_03419 PF00114 Pilin (bacterial filament) J172_03419 PF07963 Prokaryotic N-terminal methylation motif J172_03420 PF00114 Pilin (bacterial filament) J172_03420 PF07963 Prokaryotic N-terminal methylation motif J172_03421 PF00482 Type II secretion system (T2SS), protein F J172_03422 PF01478 Type IV leader peptidase family J172_03422 PF06750 J172_03422 J172_03423 PF01121 Dephospho-CoA kinase J172_03424 PF05593 J172_03424 J172_03425 PF08845 J172_03425 J172_03426 PF01527 Transposase J172_03427 PF00665 Integrase core domain J172_03427 PF13276 J172_03427 J172_03428 PF00512 His Kinase A (phospho-acceptor) domain J172_03428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03429 PF00072 Response regulator receiver domain J172_03429 PF00486 Transcriptional regulatory protein, C terminal J172_03431 PF08443 RimK-like ATP-grasp domain J172_03432 PF00128 Alpha amylase, catalytic domain J172_03432 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J172_03433 PF00816 H-NS histone family J172_03435 PF00565 Staphylococcal nuclease homologue J172_03437 PF03389 MobA/MobL family J172_03438 PF06412 J172_03438 J172_03442 PF14412 J172_03442 J172_03443 PF07791 J172_03443 J172_03445 PF04002 RadC-like JAB domain J172_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03450 PF08448 PAS fold J172_03451 PF00072 Response regulator receiver domain J172_03453 PF01520 N-acetylmuramoyl-L-alanine amidase J172_03457 PF01527 Transposase J172_03458 PF00665 Integrase core domain J172_03460 PF16162 J172_03460 J172_03462 PF13560 Helix-turn-helix domain J172_03466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03466 PF08448 PAS fold J172_03467 PF02517 CAAX protease self-immunity J172_03470 PF13676 TIR domain J172_03472 PF00589 Phage integrase family J172_03474 PF00657 GDSL-like Lipase/Acylhydrolase J172_03474 PF03797 Autotransporter beta-domain J172_03475 PF02597 ThiS family J172_03476 PF05690 Thiazole biosynthesis protein ThiG J172_03477 PF02390 Putative methyltransferase J172_03478 PF02080 TrkA-C domain J172_03478 PF03600 Citrate transporter J172_03479 PF00355 Rieske [2Fe-2S] domain J172_03481 PF01557 Fumarylacetoacetate (FAA) hydrolase family J172_03482 PF01741 Large-conductance mechanosensitive channel, MscL J172_03483 PF04389 Peptidase family M28 J172_03484 PF00356 Bacterial regulatory proteins, lacI family J172_03484 PF13377 Periplasmic binding protein-like domain J172_03485 PF00593 TonB dependent receptor J172_03485 PF07715 TonB-dependent Receptor Plug Domain J172_03486 PF00703 Glycosyl hydrolases family 2 J172_03486 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J172_03486 PF02837 Glycosyl hydrolases family 2, sugar binding domain J172_03486 PF13385 Concanavalin A-like lectin/glucanases superfamily J172_03487 PF10566 Glycoside hydrolase 97 J172_03487 PF14508 Glycosyl-hydrolase 97 N-terminal J172_03487 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J172_03488 PF03080 J172_03488 J172_03489 PF00135 Carboxylesterase family J172_03490 PF00588 SpoU rRNA Methylase family J172_03490 PF08032 RNA 2'-O ribose methyltransferase substrate binding J172_03491 PF13302 Acetyltransferase (GNAT) domain J172_03492 PF01433 Peptidase family M1 J172_03492 PF11838 ERAP1-like C-terminal domain J172_03493 PF07791 J172_03493 J172_03494 PF00665 Integrase core domain J172_03494 PF13276 J172_03494 J172_03495 PF01527 Transposase J172_03496 PF07791 J172_03496 J172_03497 PF14412 J172_03497 J172_03501 PF00873 AcrB/AcrD/AcrF family J172_03502 PF16576 J172_03502 J172_03503 PF00009 Elongation factor Tu GTP binding domain J172_03503 PF01583 Adenylylsulphate kinase J172_03504 PF01507 Phosphoadenosine phosphosulfate reductase family J172_03505 PF00175 Oxidoreductase NAD-binding domain J172_03505 PF00258 Flavodoxin J172_03505 PF00667 FAD binding domain J172_03506 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J172_03506 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J172_03507 PF01507 Phosphoadenosine phosphosulfate reductase family J172_03508 PF03929 J172_03508 J172_03509 PF00593 TonB dependent receptor J172_03509 PF07715 TonB-dependent Receptor Plug Domain J172_03511 PF01590 GAF domain J172_03511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03513 PF03466 LysR substrate binding domain J172_03514 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J172_03514 PF13241 Putative NAD(P)-binding J172_03515 PF00291 Pyridoxal-phosphate dependent enzyme J172_03516 PF04191 Phospholipid methyltransferase J172_03517 PF01661 Macro domain J172_03518 PF00274 Fructose-bisphosphate aldolase class-I J172_03519 PF00224 Pyruvate kinase, barrel domain J172_03519 PF02887 Pyruvate kinase, alpha/beta domain J172_03520 PF13419 Haloacid dehalogenase-like hydrolase J172_03521 PF00162 Phosphoglycerate kinase J172_03522 PF13163 J172_03522 J172_03523 PF13163 J172_03523 J172_03524 PF10101 J172_03524 J172_03526 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J172_03526 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J172_03527 PF08332 Calcium/calmodulin dependent protein kinase II Association J172_03528 PF03922 OmpW family J172_03529 PF03922 OmpW family J172_03530 PF02265 S1/P1 Nuclease J172_03531 PF00753 Metallo-beta-lactamase superfamily J172_03532 PF13531 Bacterial extracellular solute-binding protein J172_03533 PF00528 Binding-protein-dependent transport system inner membrane component J172_03534 PF00005 ABC transporter J172_03536 PF03544 Gram-negative bacterial TonB protein C-terminal J172_03536 PF05569 BlaR1 peptidase M56 J172_03537 PF03965 Penicillinase repressor J172_03538 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J172_03539 PF16670 J172_03539 J172_03540 PF00593 TonB dependent receptor J172_03540 PF07715 TonB-dependent Receptor Plug Domain J172_03541 PF01471 Putative peptidoglycan binding domain J172_03541 PF03734 L,D-transpeptidase catalytic domain J172_03542 PF01551 Peptidase family M23 J172_03544 PF00593 TonB dependent receptor J172_03544 PF07715 TonB-dependent Receptor Plug Domain J172_03545 PF12146 Putative lysophospholipase J172_03546 PF00456 Transketolase, thiamine diphosphate binding domain J172_03546 PF02779 Transketolase, pyrimidine binding domain J172_03546 PF02780 Transketolase, C-terminal domain J172_03547 PF00375 Sodium:dicarboxylate symporter family J172_03548 PF13584 J172_03548 J172_03549 PF00515 Tetratricopeptide repeat J172_03549 PF13519 von Willebrand factor type A domain J172_03550 PF00092 von Willebrand factor type A domain J172_03551 PF14316 J172_03551 J172_03552 PF01882 J172_03552 J172_03553 PF07726 ATPase family associated with various cellular activities (AAA) J172_03555 PF00263 J172_03555 J172_03555 PF03958 Bacterial type II/III secretion system short domain J172_03555 PF07660 Secretin and TonB N terminus short domain J172_03556 PF04351 Pilus assembly protein, PilP J172_03557 PF04350 Pilus assembly protein, PilO J172_03558 PF05137 J172_03558 J172_03559 PF11104 Type IV pilus assembly protein PilM; J172_03560 PF00905 Penicillin binding protein transpeptidase domain J172_03560 PF00912 Transglycosylase J172_03560 PF17092 J172_03560 J172_03563 PF00285 Citrate synthase J172_03564 PF01197 Ribosomal protein L31 J172_03565 PF01156 Inosine-uridine preferring nucleoside hydrolase J172_03566 PF00270 DEAD/DEAH box helicase J172_03566 PF00271 Helicase conserved C-terminal domain J172_03566 PF17191 J172_03566 J172_03567 PF01042 Endoribonuclease L-PSP J172_03568 PF02824 TGS domain J172_03568 PF04607 Region found in RelA / SpoT proteins J172_03568 PF13291 ACT domain J172_03568 PF13328 HD domain J172_03569 PF01192 RNA polymerase Rpb6 J172_03570 PF00625 Guanylate kinase J172_03571 PF03755 J172_03571 J172_03571 PF08340 J172_03571 J172_03572 PF01138 3' exoribonuclease family, domain 1 J172_03572 PF03725 3' exoribonuclease family, domain 2 J172_03573 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_03574 PF01725 Ham1 family J172_03575 PF04055 Radical SAM superfamily J172_03575 PF06969 HemN C-terminal domain J172_03576 PF07793 J172_03576 J172_03577 PF07793 J172_03577 J172_03578 PF07238 PilZ domain J172_03579 PF00557 Metallopeptidase family M24 J172_03581 PF00557 Metallopeptidase family M24 J172_03581 PF05195 Aminopeptidase P, N-terminal domain J172_03582 PF03695 Uncharacterised protein family (UPF0149) J172_03584 PF05164 Cell division protein ZapA J172_03586 PF01812 5-formyltetrahydrofolate cyclo-ligase family J172_03587 PF01878 EVE domain J172_03588 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J172_03589 PF02643 Uncharacterized ACR, COG1430 J172_03590 PF13369 J172_03590 J172_03590 PF13371 Tetratricopeptide repeat J172_03591 PF00301 Rubredoxin J172_03592 PF02581 Thiamine monophosphate synthase/TENI J172_03593 PF07715 TonB-dependent Receptor Plug Domain J172_03595 PF00202 Aminotransferase class-III J172_03596 PF00196 Bacterial regulatory proteins, luxR family J172_03596 PF13424 Tetratricopeptide repeat J172_03596 PF13481 AAA domain J172_03597 PF00127 Copper binding proteins, plastocyanin/azurin family J172_03598 PF00155 Aminotransferase class I and II J172_03599 PF01042 Endoribonuclease L-PSP J172_03600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J172_03601 PF01593 Flavin containing amine oxidoreductase J172_03602 PF00593 TonB dependent receptor J172_03602 PF07715 TonB-dependent Receptor Plug Domain J172_03604 PF00202 Aminotransferase class-III J172_03605 PF00520 Ion transport protein J172_03606 PF00106 short chain dehydrogenase J172_03608 PF01569 PAP2 superfamily J172_03608 PF09335 J172_03608 J172_03608 PF14067 J172_03608 J172_03609 PF01062 J172_03609 J172_03610 PF02190 ATP-dependent protease La (LON) domain J172_03611 PF01225 Mur ligase family, catalytic domain J172_03611 PF02875 Mur ligase family, glutamate ligase domain J172_03611 PF08245 Mur ligase middle domain J172_03612 PF00406 Adenylate kinase J172_03613 PF00365 Phosphofructokinase J172_03615 PF03030 Inorganic H+ pyrophosphatase J172_03617 PF00719 Inorganic pyrophosphatase J172_03618 PF08668 HDOD domain J172_03619 PF00593 TonB dependent receptor J172_03619 PF07715 TonB-dependent Receptor Plug Domain J172_03620 PF12833 Helix-turn-helix domain J172_03621 PF00486 Transcriptional regulatory protein, C terminal J172_03621 PF07676 WD40-like Beta Propeller Repeat J172_03622 PF01964 ThiC family J172_03622 PF13667 ThiC-associated domain J172_03624 PF00593 TonB dependent receptor J172_03624 PF07715 TonB-dependent Receptor Plug Domain J172_03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03626 PF01019 Gamma-glutamyltranspeptidase J172_03627 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J172_03627 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain J172_03628 PF00205 Thiamine pyrophosphate enzyme, central domain J172_03628 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J172_03628 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J172_03629 PF13710 ACT domain J172_03630 PF00291 Pyridoxal-phosphate dependent enzyme J172_03631 PF00682 HMGL-like J172_03631 PF08502 LeuA allosteric (dimerisation) domain J172_03632 PF00180 Isocitrate/isopropylmalate dehydrogenase J172_03633 PF00694 Aconitase C-terminal domain J172_03634 PF00330 Aconitase family (aconitate hydratase) J172_03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03635 PF03466 LysR substrate binding domain J172_03636 PF00990 GGDEF domain J172_03636 PF07494 Two component regulator propeller J172_03636 PF07495 Y_Y_Y domain J172_03637 PF00440 Bacterial regulatory proteins, tetR family J172_03637 PF14246 AefR-like transcriptional repressor, C-terminal region J172_03638 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) J172_03639 PF02321 Outer membrane efflux protein J172_03640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J172_03641 PF03279 J172_03641 J172_03642 PF04932 J172_03642 J172_03643 PF00534 Glycosyl transferases group 1 J172_03643 PF13439 Glycosyltransferase Family 4 J172_03644 PF10276 Zinc-finger domain J172_03645 PF07971 Glycosyl hydrolase family 92 J172_03646 PF00390 Malic enzyme, N-terminal domain J172_03646 PF01515 Phosphate acetyl/butaryl transferase J172_03646 PF03949 Malic enzyme, NAD binding domain J172_03647 PF00375 Sodium:dicarboxylate symporter family J172_03648 PF07396 Phosphate-selective porin O and P J172_03649 PF00072 Response regulator receiver domain J172_03649 PF00512 His Kinase A (phospho-acceptor) domain J172_03649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03649 PF02743 Cache domain J172_03649 PF12860 J172_03649 J172_03650 PF00083 Sugar (and other) transporter J172_03651 PF13531 Bacterial extracellular solute-binding protein J172_03652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03652 PF03466 LysR substrate binding domain J172_03653 PF00248 Aldo/keto reductase family J172_03654 PF12680 SnoaL-like domain J172_03655 PF11512 Agrobacterium tumefaciens protein Atu4866 J172_03657 PF00072 Response regulator receiver domain J172_03657 PF00196 Bacterial regulatory proteins, luxR family J172_03658 PF13531 Bacterial extracellular solute-binding protein J172_03659 PF00512 His Kinase A (phospho-acceptor) domain J172_03659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03659 PF08521 J172_03659 J172_03660 PF00072 Response regulator receiver domain J172_03660 PF00486 Transcriptional regulatory protein, C terminal J172_03661 PF07396 Phosphate-selective porin O and P J172_03662 PF03600 Citrate transporter J172_03664 PF13561 Enoyl-(Acyl carrier protein) reductase J172_03665 PF00356 Bacterial regulatory proteins, lacI family J172_03665 PF13377 Periplasmic binding protein-like domain J172_03666 PF07690 Major Facilitator Superfamily J172_03667 PF00593 TonB dependent receptor J172_03667 PF07715 TonB-dependent Receptor Plug Domain J172_03668 PF00128 Alpha amylase, catalytic domain J172_03669 PF01965 DJ-1/PfpI family J172_03670 PF08014 J172_03670 J172_03671 PF03193 Protein of unknown function, DUF258 J172_03672 PF00155 Aminotransferase class I and II J172_03673 PF13472 GDSL-like Lipase/Acylhydrolase family J172_03674 PF08242 Methyltransferase domain J172_03675 PF00593 TonB dependent receptor J172_03675 PF07715 TonB-dependent Receptor Plug Domain J172_03676 PF01522 Polysaccharide deacetylase J172_03677 PF00462 Glutaredoxin J172_03677 PF00581 Rhodanese-like domain J172_03679 PF06041 Bacterial protein of unknown function (DUF924) J172_03680 PF01527 Transposase J172_03681 PF13683 J172_03681 J172_03682 PF09284 Rhamnogalacturonase B, N-terminal J172_03682 PF14683 Polysaccharide lyase family 4, domain III J172_03682 PF14686 Polysaccharide lyase family 4, domain II J172_03684 PF01670 Glycosyl hydrolase family 12 J172_03685 PF02645 Uncharacterised protein, DegV family COG1307 J172_03686 PF01327 Polypeptide deformylase J172_03687 PF03960 ArsC family J172_03689 PF02225 PA domain J172_03690 PF05420 J172_03690 J172_03690 PF13432 Tetratricopeptide repeat J172_03690 PF14559 Tetratricopeptide repeat J172_03691 PF01270 Glycosyl hydrolases family 8 J172_03692 PF03170 Bacterial cellulose synthase subunit J172_03693 PF00535 Glycosyl transferase family 2 J172_03693 PF07238 PilZ domain J172_03697 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J172_03700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J172_03700 PF13641 Glycosyltransferase like family 2 J172_03702 PF00535 Glycosyl transferase family 2 J172_03703 PF01636 Phosphotransferase enzyme family J172_03705 PF00593 TonB dependent receptor J172_03706 PF04973 J172_03706 J172_03707 PF00392 Bacterial regulatory proteins, gntR family J172_03707 PF07702 UTRA domain J172_03709 PF00263 J172_03709 J172_03709 PF03958 Bacterial type II/III secretion system short domain J172_03711 PF10741 J172_03711 J172_03712 PF05137 J172_03712 J172_03713 PF03934 Type II secretion system (T2SS), protein K J172_03715 PF07963 Prokaryotic N-terminal methylation motif J172_03716 PF12019 Type II transport protein GspH J172_03717 PF08334 Type II secretion system (T2SS), protein G J172_03718 PF00482 Type II secretion system (T2SS), protein F J172_03719 PF00437 Type II/IV secretion system protein J172_03719 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J172_03720 PF00082 Subtilase family J172_03720 PF04151 Bacterial pre-peptidase C-terminal domain J172_03721 PF05658 Head domain of trimeric autotransporter adhesin J172_03721 PF05662 Coiled stalk of trimeric autotransporter adhesin J172_03721 PF13018 J172_03721 J172_03722 PF00082 Subtilase family J172_03722 PF04151 Bacterial pre-peptidase C-terminal domain J172_03723 PF03895 YadA-like C-terminal region J172_03723 PF05658 Head domain of trimeric autotransporter adhesin J172_03723 PF05662 Coiled stalk of trimeric autotransporter adhesin J172_03724 PF02769 AIR synthase related protein, C-terminal domain J172_03724 PF13507 CobB/CobQ-like glutamine amidotransferase domain J172_03725 PF10411 Disulfide bond isomerase protein N-terminus J172_03725 PF13098 Thioredoxin-like domain J172_03726 PF00589 Phage integrase family J172_03726 PF02899 Phage integrase, N-terminal SAM-like domain J172_03727 PF06271 J172_03727 J172_03729 PF03739 J172_03729 J172_03730 PF03739 J172_03730 J172_03731 PF00883 Cytosol aminopeptidase family, catalytic domain J172_03731 PF02789 Cytosol aminopeptidase family, N-terminal domain J172_03733 PF04364 DNA polymerase III chi subunit, HolC J172_03734 PF00133 tRNA synthetases class I (I, L, M and V) J172_03734 PF08264 Anticodon-binding domain of tRNA J172_03734 PF10458 Valyl tRNA synthetase tRNA binding arm J172_03735 PF00593 TonB dependent receptor J172_03735 PF07715 TonB-dependent Receptor Plug Domain J172_03736 PF01464 Transglycosylase SLT domain J172_03736 PF14718 Soluble lytic murein transglycosylase L domain J172_03737 PF00544 Pectate lyase J172_03738 PF00583 Acetyltransferase (GNAT) family J172_03740 PF01066 CDP-alcohol phosphatidyltransferase J172_03741 PF13511 J172_03741 J172_03742 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J172_03742 PF03129 Anticodon binding domain J172_03742 PF04073 Aminoacyl-tRNA editing domain J172_03743 PF00816 H-NS histone family J172_03744 PF06738 J172_03744 J172_03744 PF12821 J172_03744 J172_03745 PF02405 J172_03745 J172_03746 PF00005 ABC transporter J172_03747 PF02470 J172_03747 J172_03748 PF03886 Protein of unknown function (DUF330) J172_03749 PF13532 2OG-Fe(II) oxygenase superfamily J172_03750 PF01946 Thi4 family J172_03750 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase J172_03751 PF05045 J172_03751 J172_03751 PF14307 J172_03751 J172_03752 PF01144 Coenzyme A transferase J172_03753 PF01144 Coenzyme A transferase J172_03754 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J172_03754 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J172_03754 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J172_03754 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J172_03755 PF00483 Nucleotidyl transferase J172_03755 PF01050 Mannose-6-phosphate isomerase J172_03756 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J172_03756 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J172_03756 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J172_03757 PF04321 RmlD substrate binding domain J172_03758 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J172_03759 PF00483 Nucleotidyl transferase J172_03760 PF16363 J172_03760 J172_03761 PF01012 Electron transfer flavoprotein domain J172_03762 PF00766 Electron transfer flavoprotein FAD-binding domain J172_03762 PF01012 Electron transfer flavoprotein domain J172_03763 PF03706 J172_03763 J172_03764 PF01040 UbiA prenyltransferase family J172_03765 PF01565 FAD binding domain J172_03766 PF00106 short chain dehydrogenase J172_03768 PF01370 NAD dependent epimerase/dehydratase family J172_03769 PF01593 Flavin containing amine oxidoreductase J172_03770 PF04138 J172_03770 J172_03772 PF05721 Phytanoyl-CoA dioxygenase (PhyH) J172_03774 PF00535 Glycosyl transferase family 2 J172_03775 PF08241 Methyltransferase domain J172_03776 PF00005 ABC transporter J172_03776 PF14524 Wzt C-terminal domain J172_03777 PF01061 J172_03777 J172_03778 PF01053 Cys/Met metabolism PLP-dependent enzyme J172_03779 PF00291 Pyridoxal-phosphate dependent enzyme J172_03779 PF00571 CBS domain J172_03780 PF04325 Protein of unknown function (DUF465) J172_03782 PF14346 Domain of unknown function (DUF4398) J172_03783 PF00437 Type II/IV secretion system protein J172_03784 PF13410 Glutathione S-transferase, C-terminal domain J172_03784 PF13417 Glutathione S-transferase, N-terminal domain J172_03785 PF01557 Fumarylacetoacetate (FAA) hydrolase family J172_03786 PF00270 DEAD/DEAH box helicase J172_03786 PF00271 Helicase conserved C-terminal domain J172_03787 PF04253 Transferrin receptor-like dimerisation domain J172_03787 PF04389 Peptidase family M28 J172_03789 PF00593 TonB dependent receptor J172_03789 PF07715 TonB-dependent Receptor Plug Domain J172_03790 PF01242 6-pyruvoyl tetrahydropterin synthase J172_03791 PF09361 J172_03791 J172_03792 PF13500 AAA domain J172_03793 PF13185 GAF domain J172_03794 PF04994 TfoX C-terminal domain J172_03795 PF00756 Putative esterase J172_03796 PF00593 TonB dependent receptor J172_03796 PF07715 TonB-dependent Receptor Plug Domain J172_03797 PF13419 Haloacid dehalogenase-like hydrolase J172_03798 PF00817 impB/mucB/samB family J172_03798 PF11799 impB/mucB/samB family C-terminal domain J172_03799 PF07977 FabA-like domain J172_03800 PF00109 Beta-ketoacyl synthase, N-terminal domain J172_03800 PF02801 Beta-ketoacyl synthase, C-terminal domain J172_03802 PF01432 Peptidase family M3 J172_03803 PF00291 Pyridoxal-phosphate dependent enzyme J172_03805 PF00394 Multicopper oxidase J172_03805 PF07731 Multicopper oxidase J172_03805 PF07732 Multicopper oxidase J172_03806 PF05275 J172_03806 J172_03807 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J172_03809 PF01471 Putative peptidoglycan binding domain J172_03813 PF01380 SIS domain J172_03813 PF13522 Glutamine amidotransferase domain J172_03814 PF13437 HlyD family secretion protein J172_03814 PF13533 Biotin-lipoyl like J172_03815 PF00005 ABC transporter J172_03816 PF02687 J172_03816 J172_03816 PF12704 MacB-like periplasmic core domain J172_03817 PF02687 J172_03817 J172_03817 PF12704 MacB-like periplasmic core domain J172_03819 PF00072 Response regulator receiver domain J172_03819 PF00158 Sigma-54 interaction domain J172_03819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03820 PF00132 Bacterial transferase hexapeptide (six repeats) J172_03820 PF12804 MobA-like NTP transferase domain J172_03820 PF14602 Hexapeptide repeat of succinyl-transferase J172_03821 PF04138 J172_03821 J172_03822 PF01817 Chorismate mutase type II J172_03823 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J172_03823 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J172_03824 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J172_03824 PF02874 ATP synthase alpha/beta family, beta-barrel domain J172_03825 PF00231 ATP synthase J172_03826 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J172_03826 PF00306 ATP synthase alpha/beta chain, C terminal domain J172_03826 PF02874 ATP synthase alpha/beta family, beta-barrel domain J172_03827 PF00213 ATP synthase delta (OSCP) subunit J172_03828 PF00430 ATP synthase B/B' CF(0) J172_03829 PF00137 ATP synthase subunit C J172_03830 PF00119 ATP synthase A chain J172_03834 PF00364 Biotin-requiring enzyme J172_03834 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J172_03834 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_03836 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J172_03836 PF00364 Biotin-requiring enzyme J172_03836 PF02817 e3 binding domain J172_03837 PF11101 J172_03837 J172_03838 PF03167 Uracil DNA glycosylase superfamily J172_03839 PF03922 OmpW family J172_03842 PF03180 NLPA lipoprotein J172_03843 PF00528 Binding-protein-dependent transport system inner membrane component J172_03844 PF00005 ABC transporter J172_03844 PF09383 NIL domain J172_03845 PF00892 EamA-like transporter family J172_03846 PF04461 Protein of unknown function (DUF520) J172_03848 PF00072 Response regulator receiver domain J172_03848 PF00512 His Kinase A (phospho-acceptor) domain J172_03848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03849 PF12146 Putative lysophospholipase J172_03850 PF07209 J172_03850 J172_03851 PF13561 Enoyl-(Acyl carrier protein) reductase J172_03852 PF13419 Haloacid dehalogenase-like hydrolase J172_03853 PF00849 RNA pseudouridylate synthase J172_03854 PF05175 Methyltransferase small domain J172_03856 PF07995 Glucose / Sorbosone dehydrogenase J172_03857 PF11607 Protein of unknown function (DUF3247) J172_03858 PF00072 Response regulator receiver domain J172_03858 PF00512 His Kinase A (phospho-acceptor) domain J172_03858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_03858 PF08448 PAS fold J172_03858 PF13426 PAS domain J172_03861 PF11454 J172_03861 J172_03862 PF00842 Alanine racemase, C-terminal domain J172_03862 PF01168 Alanine racemase, N-terminal domain J172_03863 PF01266 FAD dependent oxidoreductase J172_03864 PF01037 AsnC family J172_03864 PF13404 AsnC-type helix-turn-helix domain J172_03866 PF01641 SelR domain J172_03867 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme J172_03868 PF01618 J172_03868 J172_03869 PF00691 OmpA family J172_03869 PF13677 J172_03869 J172_03871 PF13223 J172_03871 J172_03873 PF11730 J172_03873 J172_03874 PF01061 J172_03874 J172_03875 PF00005 ABC transporter J172_03876 PF00999 Sodium/hydrogen exchanger family J172_03877 PF02469 Fasciclin domain J172_03878 PF03167 Uracil DNA glycosylase superfamily J172_03878 PF13566 J172_03878 J172_03879 PF04055 Radical SAM superfamily J172_03880 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J172_03881 PF07681 J172_03881 J172_03882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03882 PF03466 LysR substrate binding domain J172_03883 PF03358 NADPH-dependent FMN reductase J172_03884 PF00248 Aldo/keto reductase family J172_03885 PF00535 Glycosyl transferase family 2 J172_03886 PF01431 Peptidase family M13 J172_03886 PF05649 Peptidase family M13 J172_03887 PF09995 J172_03887 J172_03890 PF13520 Amino acid permease J172_03892 PF00072 Response regulator receiver domain J172_03892 PF04397 LytTr DNA-binding domain J172_03893 PF06580 J172_03893 J172_03894 PF01266 FAD dependent oxidoreductase J172_03896 PF05974 Domain of unknown function (DUF892) J172_03897 PF05067 Manganese containing catalase J172_03900 PF01339 CheB methylesterase J172_03900 PF01739 CheR methyltransferase, SAM binding domain J172_03900 PF03705 CheR methyltransferase, all-alpha domain J172_03900 PF07536 J172_03900 J172_03900 PF08447 PAS fold J172_03900 PF13596 PAS domain J172_03901 PF00072 Response regulator receiver domain J172_03903 PF00072 Response regulator receiver domain J172_03903 PF00158 Sigma-54 interaction domain J172_03903 PF02954 Bacterial regulatory protein, Fis family J172_03905 PF01654 J172_03905 J172_03906 PF02322 J172_03906 J172_03909 PF13561 Enoyl-(Acyl carrier protein) reductase J172_03910 PF16363 J172_03910 J172_03911 PF13692 Glycosyl transferases group 1 J172_03912 PF03275 UDP-galactopyranose mutase J172_03912 PF13450 NAD(P)-binding Rossmann-like domain J172_03914 PF00005 ABC transporter J172_03914 PF00664 ABC transporter transmembrane region J172_03915 PF12244 J172_03915 J172_03916 PF13628 J172_03916 J172_03917 PF00107 Zinc-binding dehydrogenase J172_03917 PF08240 Alcohol dehydrogenase GroES-like domain J172_03917 PF13823 Alcohol dehydrogenase GroES-associated J172_03919 PF03692 J172_03919 J172_03922 PF11828 J172_03922 J172_03923 PF05650 J172_03923 J172_03924 PF05650 J172_03924 J172_03925 PF11445 J172_03925 J172_03926 PF00593 TonB dependent receptor J172_03926 PF07715 TonB-dependent Receptor Plug Domain J172_03927 PF12040 J172_03927 J172_03928 PF12040 J172_03928 J172_03928 PF12679 J172_03928 J172_03929 PF00005 ABC transporter J172_03930 PF00246 Zinc carboxypeptidase J172_03931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03931 PF03466 LysR substrate binding domain J172_03932 PF01042 Endoribonuclease L-PSP J172_03934 PF01527 Transposase J172_03935 PF00665 Integrase core domain J172_03937 PF12849 PBP superfamily domain J172_03938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J172_03938 PF00672 HAMP domain J172_03939 PF01223 DNA/RNA non-specific endonuclease J172_03940 PF12697 Alpha/beta hydrolase family J172_03941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_03941 PF03466 LysR substrate binding domain J172_03942 PF02525 Flavodoxin-like fold J172_03943 PF03795 YCII-related domain J172_03946 PF07866 Protein of unknown function (DUF1653) J172_03951 PF00557 Metallopeptidase family M24 J172_03952 PF11903 J172_03952 J172_03953 PF05593 J172_03953 J172_03956 PF00140 Sigma-70 factor, region 1 J172_03956 PF03979 Sigma-70 factor, region 1 J172_03956 PF04539 Sigma-70 region 3 J172_03956 PF04542 Sigma-70 region 2 J172_03956 PF04545 Sigma-70, region 4 J172_03956 PF04546 Sigma-70, non-essential region J172_03957 PF02580 D-Tyr-tRNA(Tyr) deacylase J172_03958 PF03279 J172_03958 J172_03959 PF13420 Acetyltransferase (GNAT) domain J172_03960 PF00925 GTP cyclohydrolase II J172_03961 PF03703 J172_03961 J172_03962 PF03703 J172_03962 J172_03963 PF02350 UDP-N-acetylglucosamine 2-epimerase J172_03964 PF00535 Glycosyl transferase family 2 J172_03965 PF04932 J172_03965 J172_03966 PF13231 J172_03966 J172_03967 PF01029 NusB family J172_03967 PF01189 NOL1/NOP2/sun family J172_03968 PF00551 Formyl transferase J172_03968 PF02911 Formyl transferase, C-terminal domain J172_03969 PF01327 Polypeptide deformylase J172_03970 PF01476 LysM domain J172_03971 PF02481 DNA recombination-mediator protein A J172_03972 PF04361 J172_03972 J172_03973 PF00114 Pilin (bacterial filament) J172_03973 PF14237 J172_03973 J172_03974 PF06271 J172_03974 J172_03974 PF14237 J172_03974 J172_03975 PF01131 DNA topoisomerase J172_03975 PF01751 Toprim domain J172_03975 PF13368 J172_03975 J172_03976 PF01300 Telomere recombination J172_03979 PF13561 Enoyl-(Acyl carrier protein) reductase J172_03981 PF01343 Peptidase family S49 J172_03982 PF01554 MatE J172_03983 PF12412 J172_03983 J172_03984 PF11304 J172_03984 J172_03986 PF00270 DEAD/DEAH box helicase J172_03986 PF00271 Helicase conserved C-terminal domain J172_03987 PF00043 Glutathione S-transferase, C-terminal domain J172_03987 PF13417 Glutathione S-transferase, N-terminal domain J172_03988 PF01936 NYN domain J172_03988 PF12872 OST-HTH/LOTUS domain J172_03990 PF07992 Pyridine nucleotide-disulphide oxidoreductase J172_03991 PF03458 J172_03991 J172_03992 PF00140 Sigma-70 factor, region 1 J172_03992 PF04542 Sigma-70 region 2 J172_03992 PF04545 Sigma-70, region 4 J172_03993 PF03167 Uracil DNA glycosylase superfamily J172_03994 PF00072 Response regulator receiver domain J172_03996 PF00005 ABC transporter J172_03997 PF00270 DEAD/DEAH box helicase J172_03997 PF00271 Helicase conserved C-terminal domain J172_03997 PF12300 J172_03997 J172_03998 PF00085 Thioredoxin J172_03999 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J172_03999 PF07497 Rho termination factor, RNA-binding domain J172_03999 PF07498 Rho termination factor, N-terminal domain J172_04000 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J172_04001 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_04001 PF03466 LysR substrate binding domain J172_04003 PF03971 Monomeric isocitrate dehydrogenase J172_04005 PF00270 DEAD/DEAH box helicase J172_04006 PF09704 CRISPR-associated protein (Cas_Cas5) J172_04007 PF09709 J172_04007 J172_04008 PF09709 J172_04008 J172_04009 PF05107 J172_04009 J172_04010 PF01930 Domain of unknown function DUF83 J172_04011 PF01867 CRISPR associated protein Cas1 J172_04012 PF09827 CRISPR associated protein Cas2 J172_04014 PF01476 LysM domain J172_04015 PF14489 QueF-like protein J172_04015 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J172_04016 PF01546 Peptidase family M20/M25/M40 J172_04016 PF07687 Peptidase dimerisation domain J172_04017 PF16576 J172_04017 J172_04018 PF00873 AcrB/AcrD/AcrF family J172_04019 PF00873 AcrB/AcrD/AcrF family J172_04020 PF07063 Domain of unknown function (DUF1338) J172_04023 PF13419 Haloacid dehalogenase-like hydrolase J172_04024 PF13202 EF hand J172_04025 PF13202 EF hand J172_04027 PF14255 J172_04027 J172_04028 PF01427 D-ala-D-ala dipeptidase J172_04029 PF01510 N-acetylmuramoyl-L-alanine amidase J172_04030 PF00877 NlpC/P60 family J172_04030 PF12913 SH3 domain of the SH3b1 type J172_04030 PF12914 SH3 domain of SH3b2 type J172_04031 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J172_04031 PF13378 Enolase C-terminal domain-like J172_04033 PF13520 Amino acid permease J172_04036 PF05360 J172_04036 J172_04037 PF07995 Glucose / Sorbosone dehydrogenase J172_04038 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_04038 PF01915 Glycosyl hydrolase family 3 C-terminal domain J172_04038 PF14310 Fibronectin type III-like domain J172_04039 PF02152 Dihydroneopterin aldolase J172_04040 PF00814 Glycoprotease family J172_04041 PF01165 Ribosomal protein S21 J172_04042 PF09424 Yqey-like protein J172_04043 PF03631 J172_04043 J172_04044 PF01807 CHC2 zinc finger J172_04044 PF08275 DNA primase catalytic core, N-terminal domain J172_04044 PF08278 DNA primase DnaG DnaB-binding J172_04044 PF10410 DnaB-helicase binding domain of primase J172_04044 PF13155 Toprim-like J172_04045 PF13593 SBF-like CPA transporter family (DUF4137) J172_04046 PF13899 Thioredoxin-like J172_04047 PF01040 UbiA prenyltransferase family J172_04048 PF02628 J172_04048 J172_04050 PF02104 J172_04050 J172_04051 PF11137 J172_04051 J172_04052 PF00510 Cytochrome c oxidase subunit III J172_04053 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J172_04055 PF00115 Cytochrome C and Quinol oxidase polypeptide I J172_04056 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J172_04056 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J172_04057 PF10003 J172_04057 J172_04058 PF00171 Aldehyde dehydrogenase family J172_04058 PF01619 Proline dehydrogenase J172_04058 PF14850 DNA-binding domain of Proline dehydrogenase J172_04066 PF00579 tRNA synthetases class I (W and Y) J172_04067 PF01551 Peptidase family M23 J172_04067 PF04225 Opacity-associated protein A LysM-like domain J172_04068 PF03702 Uncharacterised protein family (UPF0075) J172_04070 PF07690 Major Facilitator Superfamily J172_04071 PF03372 Endonuclease/Exonuclease/phosphatase family J172_04072 PF00156 Phosphoribosyl transferase domain J172_04074 PF13614 AAA domain J172_04075 PF02195 ParB-like nuclease domain J172_04076 PF11731 J172_04076 J172_04077 PF01370 NAD dependent epimerase/dehydratase family J172_04078 PF00535 Glycosyl transferase family 2 J172_04079 PF07578 Lipid A Biosynthesis N-terminal domain J172_04081 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J172_04081 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J172_04081 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J172_04081 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J172_04082 PF00692 dUTPase J172_04083 PF02441 Flavoprotein J172_04083 PF04127 DNA / pantothenate metabolism flavoprotein J172_04084 PF04002 RadC-like JAB domain J172_04085 PF00750 tRNA synthetases class I (R) J172_04085 PF03485 Arginyl tRNA synthetase N terminal domain J172_04085 PF05746 DALR anticodon binding domain J172_04086 PF05036 Sporulation related domain J172_04088 PF00106 short chain dehydrogenase J172_04089 PF01757 J172_04089 J172_04090 PF03033 Glycosyltransferase family 28 N-terminal domain J172_04091 PF00501 AMP-binding enzyme J172_04091 PF00550 Phosphopantetheine attachment site J172_04091 PF00668 Condensation domain J172_04091 PF00975 Thioesterase domain J172_04091 PF13193 AMP-binding enzyme C-terminal domain J172_04092 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J172_04093 PF01564 Spermine/spermidine synthase J172_04093 PF17284 J172_04093 J172_04094 PF09851 J172_04094 J172_04094 PF14470 Bacterial PH domain J172_04097 PF02838 Glycosyl hydrolase family 20, domain 2 J172_04097 PF07555 beta-N-acetylglucosaminidase J172_04098 PF00543 Nitrogen regulatory protein P-II J172_04099 PF04380 J172_04099 J172_04100 PF01078 Magnesium chelatase, subunit ChlI J172_04100 PF13541 Subunit ChlI of Mg-chelatase J172_04101 PF00589 Phage integrase family J172_04106 PF00665 Integrase core domain J172_04109 PF04471 Restriction endonuclease J172_04110 PF13245 Part of AAA domain J172_04110 PF13361 UvrD-like helicase C-terminal domain J172_04111 PF13175 AAA ATPase domain J172_04112 PF00665 Integrase core domain J172_04113 PF01527 Transposase J172_04114 PF13175 AAA ATPase domain J172_04115 PF05866 Endodeoxyribonuclease RusA J172_04117 PF13304 AAA domain J172_04119 PF13280 J172_04119 J172_04121 PF00899 ThiF family J172_04121 PF14464 Prokaryotic homologs of the JAB domain J172_04123 PF01078 Magnesium chelatase, subunit ChlI J172_04123 PF13335 J172_04123 J172_04124 PF08212 Lipocalin-like domain J172_04126 PF00563 EAL domain J172_04126 PF12792 J172_04126 J172_04127 PF00487 J172_04127 J172_04128 PF00111 2Fe-2S iron-sulfur cluster binding domain J172_04128 PF00175 Oxidoreductase NAD-binding domain J172_04128 PF00970 Oxidoreductase FAD-binding domain J172_04129 PF00440 Bacterial regulatory proteins, tetR family J172_04134 PF01145 SPFH domain / Band 7 family J172_04135 PF01139 tRNA-splicing ligase RtcB J172_04137 PF00326 Prolyl oligopeptidase family J172_04138 PF11379 J172_04138 J172_04142 PF13628 J172_04142 J172_04143 PF01370 NAD dependent epimerase/dehydratase family J172_04143 PF08338 Domain of unknown function (DUF1731) J172_04144 PF00072 Response regulator receiver domain J172_04144 PF00486 Transcriptional regulatory protein, C terminal J172_04145 PF00512 His Kinase A (phospho-acceptor) domain J172_04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_04147 PF11769 J172_04147 J172_04149 PF13180 PDZ domain J172_04149 PF13365 Trypsin-like peptidase domain J172_04153 PF01594 J172_04153 J172_04154 PF13419 Haloacid dehalogenase-like hydrolase J172_04155 PF00883 Cytosol aminopeptidase family, catalytic domain J172_04157 PF04542 Sigma-70 region 2 J172_04157 PF08281 Sigma-70, region 4 J172_04158 PF00199 Catalase J172_04159 PF01292 Prokaryotic cytochrome b561 J172_04160 PF06283 Trehalose utilisation J172_04161 PF00072 Response regulator receiver domain J172_04161 PF00196 Bacterial regulatory proteins, luxR family J172_04162 PF07730 Histidine kinase J172_04163 PF16576 J172_04163 J172_04164 PF00005 ABC transporter J172_04165 PF02687 J172_04165 J172_04165 PF12704 MacB-like periplasmic core domain J172_04166 PF02687 J172_04166 J172_04166 PF12704 MacB-like periplasmic core domain J172_04167 PF12697 Alpha/beta hydrolase family J172_04168 PF00892 EamA-like transporter family J172_04169 PF00892 EamA-like transporter family J172_04170 PF00892 EamA-like transporter family J172_04172 PF02225 PA domain J172_04172 PF04389 Peptidase family M28 J172_04173 PF00753 Metallo-beta-lactamase superfamily J172_04174 PF00579 tRNA synthetases class I (W and Y) J172_04175 PF05532 CsbD-like J172_04176 PF08085 J172_04176 J172_04177 PF08085 J172_04177 J172_04178 PF00491 Arginase family J172_04179 PF03259 Roadblock/LC7 domain J172_04183 PF02223 Thymidylate kinase J172_04185 PF05036 Sporulation related domain J172_04186 PF03309 Type III pantothenate kinase J172_04187 PF02237 Biotin protein ligase C terminal domain J172_04187 PF03099 Biotin/lipoate A/B protein ligase family J172_04187 PF08279 HTH domain J172_04189 PF06167 Glucose-regulated metallo-peptidase M90 J172_04190 PF07394 J172_04190 J172_04191 PF08811 J172_04191 J172_04192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_04193 PF00072 Response regulator receiver domain J172_04193 PF00486 Transcriptional regulatory protein, C terminal J172_04195 PF01207 Dihydrouridine synthase (Dus) J172_04197 PF12796 Ankyrin repeats (3 copies) J172_04198 PF00199 Catalase J172_04198 PF06628 Catalase-related immune-responsive J172_04199 PF13307 Helicase C-terminal domain J172_04202 PF01488 Shikimate / quinate 5-dehydrogenase J172_04202 PF08501 Shikimate dehydrogenase substrate binding domain J172_04203 PF07676 WD40-like Beta Propeller Repeat J172_04204 PF00175 Oxidoreductase NAD-binding domain J172_04204 PF00258 Flavodoxin J172_04204 PF03929 J172_04204 J172_04205 PF01223 DNA/RNA non-specific endonuclease J172_04206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_04206 PF03466 LysR substrate binding domain J172_04207 PF01370 NAD dependent epimerase/dehydratase family J172_04208 PF00490 Delta-aminolevulinic acid dehydratase J172_04211 PF05960 Bacterial protein of unknown function (DUF885) J172_04212 PF00326 Prolyl oligopeptidase family J172_04212 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J172_04213 PF00043 Glutathione S-transferase, C-terminal domain J172_04213 PF02798 Glutathione S-transferase, N-terminal domain J172_04214 PF00593 TonB dependent receptor J172_04214 PF07715 TonB-dependent Receptor Plug Domain J172_04215 PF07277 J172_04215 J172_04216 PF13621 Cupin-like domain J172_04217 PF04820 Tryptophan halogenase J172_04218 PF03544 Gram-negative bacterial TonB protein C-terminal J172_04219 PF12679 J172_04219 J172_04220 PF00005 ABC transporter J172_04221 PF00561 alpha/beta hydrolase fold J172_04221 PF08386 TAP-like protein J172_04222 PF01381 Helix-turn-helix J172_04224 PF01229 Glycosyl hydrolases family 39 J172_04225 PF02583 Metal-sensitive transcriptional repressor J172_04226 PF01545 Cation efflux family J172_04227 PF03929 J172_04227 J172_04228 PF00593 TonB dependent receptor J172_04228 PF07715 TonB-dependent Receptor Plug Domain J172_04229 PF11287 J172_04229 J172_04230 PF01965 DJ-1/PfpI family J172_04230 PF12833 Helix-turn-helix domain J172_04231 PF00175 Oxidoreductase NAD-binding domain J172_04231 PF00970 Oxidoreductase FAD-binding domain J172_04232 PF00005 ABC transporter J172_04233 PF01061 J172_04233 J172_04235 PF12686 J172_04235 J172_04236 PF02558 Ketopantoate reductase PanE/ApbA J172_04236 PF08546 Ketopantoate reductase PanE/ApbA C terminal J172_04238 PF03061 Thioesterase superfamily J172_04240 PF00085 Thioredoxin J172_04241 PF00258 Flavodoxin J172_04242 PF00268 Ribonucleotide reductase, small chain J172_04243 PF00317 Ribonucleotide reductase, all-alpha domain J172_04243 PF02867 Ribonucleotide reductase, barrel domain J172_04244 PF04332 J172_04244 J172_04245 PF13302 Acetyltransferase (GNAT) domain J172_04245 PF13380 CoA binding domain J172_04245 PF13549 ATP-grasp domain J172_04245 PF13607 Succinyl-CoA ligase like flavodoxin domain J172_04246 PF00571 CBS domain J172_04246 PF01769 Divalent cation transporter J172_04246 PF03448 MgtE intracellular N domain J172_04247 PF00194 Eukaryotic-type carbonic anhydrase J172_04248 PF00999 Sodium/hydrogen exchanger family J172_04248 PF02254 TrkA-N domain J172_04249 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J172_04249 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J172_04250 PF00723 Glycosyl hydrolases family 15 J172_04252 PF00023 Ankyrin repeat J172_04252 PF12796 Ankyrin repeats (3 copies) J172_04253 PF05166 YcgL domain J172_04254 PF00109 Beta-ketoacyl synthase, N-terminal domain J172_04254 PF02801 Beta-ketoacyl synthase, C-terminal domain J172_04255 PF13723 J172_04255 J172_04256 PF00535 Glycosyl transferase family 2 J172_04257 PF04820 Tryptophan halogenase J172_04257 PF13450 NAD(P)-binding Rossmann-like domain J172_04259 PF13561 Enoyl-(Acyl carrier protein) reductase J172_04262 PF03176 MMPL family J172_04266 PF03279 J172_04266 J172_04267 PF07977 FabA-like domain J172_04268 PF01553 Acyltransferase J172_04270 PF00550 Phosphopantetheine attachment site J172_04271 PF04820 Tryptophan halogenase J172_04274 PF00501 AMP-binding enzyme J172_04275 PF00326 Prolyl oligopeptidase family J172_04275 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J172_04278 PF01218 Coproporphyrinogen III oxidase J172_04279 PF00476 DNA polymerase family A J172_04279 PF01367 5'-3' exonuclease, C-terminal SAM fold J172_04279 PF01612 3'-5' exonuclease J172_04279 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J172_04280 PF11191 Protein of unknown function (DUF2782) J172_04281 PF06812 J172_04281 J172_04282 PF05860 haemagglutination activity domain J172_04283 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J172_04283 PF08479 POTRA domain, ShlB-type J172_04285 PF00069 Protein kinase domain J172_04285 PF03781 Sulfatase-modifying factor enzyme 1 J172_04286 PF13672 Protein phosphatase 2C J172_04287 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) J172_04288 PF06744 J172_04288 J172_04288 PF06761 J172_04288 J172_04288 PF14331 J172_04288 J172_04289 PF00691 OmpA family J172_04289 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) J172_04290 PF05936 J172_04290 J172_04291 PF00498 FHA domain J172_04293 PF05954 Phage late control gene D protein (GPD) J172_04294 PF00515 Tetratricopeptide repeat J172_04294 PF13489 Methyltransferase domain J172_04295 PF05488 PAAR motif J172_04296 PF00069 Protein kinase domain J172_04296 PF13374 Tetratricopeptide repeat J172_04296 PF13424 Tetratricopeptide repeat J172_04297 PF07638 ECF sigma factor J172_04298 PF04542 Sigma-70 region 2 J172_04298 PF08281 Sigma-70, region 4 J172_04299 PF04773 FecR protein J172_04299 PF16220 J172_04299 J172_04299 PF16344 J172_04299 J172_04300 PF00593 TonB dependent receptor J172_04300 PF07715 TonB-dependent Receptor Plug Domain J172_04301 PF00328 Histidine phosphatase superfamily (branch 2) J172_04302 PF01419 Jacalin-like lectin domain J172_04306 PF01609 Transposase DDE domain J172_04308 PF00004 ATPase family associated with various cellular activities (AAA) J172_04308 PF07724 AAA domain (Cdc48 subfamily) J172_04308 PF10431 C-terminal, D2-small domain, of ClpB protein J172_04309 PF06996 J172_04309 J172_04310 PF05947 J172_04310 J172_04311 PF04965 Gene 25-like lysozyme J172_04312 PF07024 ImpE protein J172_04313 PF05638 Protein of unknown function (DUF796) J172_04314 PF05943 J172_04314 J172_04315 PF05591 J172_04315 J172_04316 PF12833 Helix-turn-helix domain J172_04317 PF00582 Universal stress protein family J172_04318 PF00132 Bacterial transferase hexapeptide (six repeats) J172_04318 PF12464 Maltose acetyltransferase J172_04319 PF00580 UvrD/REP helicase N-terminal domain J172_04319 PF13361 UvrD-like helicase C-terminal domain J172_04320 PF13454 FAD-NAD(P)-binding J172_04321 PF13091 PLD-like domain J172_04321 PF13396 J172_04321 J172_04322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_04322 PF03466 LysR substrate binding domain J172_04323 PF03737 Demethylmenaquinone methyltransferase J172_04324 PF04303 PrpF protein J172_04325 PF04909 Amidohydrolase J172_04326 PF00471 Ribosomal protein L33 J172_04327 PF00830 Ribosomal L28 family J172_04328 PF00873 AcrB/AcrD/AcrF family J172_04329 PF16576 J172_04329 J172_04330 PF02321 Outer membrane efflux protein J172_04332 PF05960 Bacterial protein of unknown function (DUF885) J172_04333 PF02527 rRNA small subunit methyltransferase G J172_04334 PF09423 PhoD-like phosphatase J172_04334 PF16655 J172_04334 J172_04336 PF09423 PhoD-like phosphatase J172_04336 PF16655 J172_04336 J172_04337 PF01648 4'-phosphopantetheinyl transferase superfamily J172_04338 PF04226 J172_04338 J172_04339 PF04828 Glutathione-dependent formaldehyde-activating enzyme J172_04340 PF03372 Endonuclease/Exonuclease/phosphatase family J172_04342 PF00480 ROK family J172_04344 PF13616 PPIC-type PPIASE domain J172_04345 PF03009 Glycerophosphoryl diester phosphodiesterase family J172_04346 PF00474 Sodium:solute symporter family J172_04347 PF04341 J172_04347 J172_04349 PF00501 AMP-binding enzyme J172_04349 PF13193 AMP-binding enzyme C-terminal domain J172_04349 PF16177 J172_04349 J172_04350 PF00072 Response regulator receiver domain J172_04350 PF00196 Bacterial regulatory proteins, luxR family J172_04351 PF14415 Domain of unknown function (DUF4424) J172_04353 PF00578 AhpC/TSA family J172_04355 PF04616 Glycosyl hydrolases family 43 J172_04356 PF00248 Aldo/keto reductase family J172_04357 PF04909 Amidohydrolase J172_04358 PF13561 Enoyl-(Acyl carrier protein) reductase J172_04359 PF01557 Fumarylacetoacetate (FAA) hydrolase family J172_04360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J172_04360 PF13378 Enolase C-terminal domain-like J172_04362 PF05336 Domain of unknown function (DUF718) J172_04363 PF07690 Major Facilitator Superfamily J172_04364 PF01614 Bacterial transcriptional regulator J172_04364 PF09339 IclR helix-turn-helix domain J172_04365 PF02659 J172_04365 J172_04366 PF00072 Response regulator receiver domain J172_04366 PF00512 His Kinase A (phospho-acceptor) domain J172_04366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J172_04366 PF12860 J172_04366 J172_04367 PF15979 J172_04367 J172_04368 PF06165 Glycosyltransferase family 36 J172_04368 PF17167 J172_04368 J172_04369 PF13347 MFS/sugar transport protein J172_04370 PF13671 AAA domain J172_04371 PF13360 PQQ-like domain J172_04375 PF04357 J172_04375 J172_04376 PF01103 Surface antigen J172_04376 PF07244 Surface antigen variable number repeat J172_04376 PF17243 J172_04376 J172_04379 PF01527 Transposase J172_04380 PF00665 Integrase core domain J172_04380 PF13276 J172_04380 J172_04381 PF00005 ABC transporter J172_04381 PF00664 ABC transporter transmembrane region J172_04383 PF02092 J172_04383 J172_04383 PF05746 DALR anticodon binding domain J172_04384 PF02091 Glycyl-tRNA synthetase alpha subunit J172_04385 PF00437 Type II/IV secretion system protein J172_04385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J172_04387 PF00117 Glutamine amidotransferase class-I J172_04389 PF00902 Sec-independent protein translocase protein (TatC) J172_04390 PF02416 mttA/Hcf106 family J172_04391 PF02416 mttA/Hcf106 family J172_04392 PF04366 J172_04392 J172_04393 PF00762 Ferrochelatase J172_04394 PF00561 alpha/beta hydrolase fold J172_04395 PF01863 Protein of unknown function DUF45 J172_04396 PF04381 Putative exonuclease, RdgC J172_04397 PF01171 PP-loop family J172_04399 PF00356 Bacterial regulatory proteins, lacI family J172_04399 PF13377 Periplasmic binding protein-like domain J172_04400 PF03648 Glycosyl hydrolase family 67 N-terminus J172_04400 PF07477 Glycosyl hydrolase family 67 C-terminus J172_04400 PF07488 Glycosyl hydrolase family 67 middle domain J172_04401 PF02837 Glycosyl hydrolases family 2, sugar binding domain J172_04401 PF03629 Domain of unknown function (DUF303) J172_04402 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J172_04402 PF13378 Enolase C-terminal domain-like J172_04403 PF04616 Glycosyl hydrolases family 43 J172_04404 PF00933 Glycosyl hydrolase family 3 N terminal domain J172_04404 PF01915 Glycosyl hydrolase family 3 C-terminal domain J172_04404 PF07691 PA14 domain J172_04404 PF14310 Fibronectin type III-like domain J172_04405 PF01232 Mannitol dehydrogenase Rossmann domain J172_04405 PF08125 Mannitol dehydrogenase C-terminal domain J172_04408 PF01344 Kelch motif J172_04408 PF13964 Kelch motif J172_04409 PF00440 Bacterial regulatory proteins, tetR family J172_04410 PF00171 Aldehyde dehydrogenase family J172_04413 PF00202 Aminotransferase class-III J172_04414 PF00202 Aminotransferase class-III J172_04415 PF00596 Class II Aldolase and Adducin N-terminal domain J172_04416 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J172_04416 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J172_04417 PF09694 J172_04417 J172_04418 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) J172_04419 PF08450 SMP-30/Gluconolaconase/LRE-like region J172_04420 PF00331 Glycosyl hydrolase family 10 J172_04421 PF00703 Glycosyl hydrolases family 2 J172_04421 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J172_04421 PF02837 Glycosyl hydrolases family 2, sugar binding domain J172_04421 PF16355 J172_04421 J172_04422 PF02614 Glucuronate isomerase J172_04423 PF00331 Glycosyl hydrolase family 10 J172_04425 PF00331 Glycosyl hydrolase family 10 J172_04426 PF07690 Major Facilitator Superfamily J172_04427 PF00593 TonB dependent receptor J172_04427 PF07715 TonB-dependent Receptor Plug Domain J172_04428 PF13347 MFS/sugar transport protein J172_04429 PF04616 Glycosyl hydrolases family 43 J172_04430 PF08212 Lipocalin-like domain J172_04431 PF06877 Regulator of ribonuclease activity B J172_04438 PF04325 Protein of unknown function (DUF465) J172_04439 PF00107 Zinc-binding dehydrogenase J172_04439 PF08240 Alcohol dehydrogenase GroES-like domain J172_04440 PF01553 Acyltransferase J172_04442 PF00356 Bacterial regulatory proteins, lacI family J172_04442 PF13377 Periplasmic binding protein-like domain J172_04443 PF00593 TonB dependent receptor J172_04443 PF13620 Carboxypeptidase regulatory-like domain J172_04444 PF00593 TonB dependent receptor J172_04445 PF04820 Tryptophan halogenase J172_04446 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J172_04447 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J172_04449 PF04337 Protein of unknown function, DUF480 J172_04450 PF14094 J172_04450 J172_04451 PF13302 Acetyltransferase (GNAT) domain J172_04452 PF00580 UvrD/REP helicase N-terminal domain J172_04452 PF13361 UvrD-like helicase C-terminal domain J172_04453 PF00265 Thymidine kinase J172_04454 PF00512 His Kinase A (phospho-acceptor) domain J172_04454 PF01590 GAF domain J172_04455 PF04349 Periplasmic glucan biosynthesis protein, MdoG J172_04456 PF14315 J172_04456 J172_04457 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J172_04457 PF06827 Zinc finger found in FPG and IleRS J172_04457 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J172_04464 PF03594 J172_04464 J172_04465 PF00360 Phytochrome region J172_04465 PF01590 GAF domain J172_04465 PF08446 PAS fold J172_04465 PF08448 PAS fold J172_04466 PF01126 Heme oxygenase J172_04467 PF07690 Major Facilitator Superfamily J172_04468 PF01263 Aldose 1-epimerase J172_04468 PF01471 Putative peptidoglycan binding domain J172_04468 PF13406 Transglycosylase SLT domain J172_04470 PF02810 SEC-C motif J172_04471 PF01925 J172_04471 J172_04472 PF13555 P-loop containing region of AAA domain J172_04472 PF13558 Putative exonuclease SbcCD, C subunit J172_04473 PF13835 J172_04473 J172_04474 PF11855 J172_04474 J172_04475 PF01227 GTP cyclohydrolase I J172_04476 PF12802 MarR family J172_04477 PF07869 J172_04477 J172_04478 PF13437 HlyD family secretion protein J172_04478 PF13533 Biotin-lipoyl like J172_04479 PF02321 Outer membrane efflux protein J172_04480 PF04632 J172_04480 J172_04481 PF00083 Sugar (and other) transporter J172_04482 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J172_04483 PF13091 PLD-like domain J172_04486 PF05016 Plasmid stabilisation system protein J172_04487 PF03869 Arc-like DNA binding domain J172_04488 PF01850 PIN domain J172_04489 PF00756 Putative esterase J172_04490 PF09722 J172_04490 J172_04493 PF00849 RNA pseudouridylate synthase J172_04495 PF01527 Transposase J172_04496 PF00665 Integrase core domain J172_04496 PF13276 J172_04496 J172_04497 PF07080 Protein of unknown function (DUF1348) J172_04498 PF01609 Transposase DDE domain J172_04499 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain J172_04499 PF00364 Biotin-requiring enzyme J172_04499 PF02626 Allophanate hydrolase subunit 2 J172_04499 PF02682 Allophanate hydrolase subunit 1 J172_04499 PF02785 Biotin carboxylase C-terminal domain J172_04499 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J172_04500 PF01425 Amidase J172_04501 PF01609 Transposase DDE domain J172_04502 PF07080 Protein of unknown function (DUF1348) J172_04504 PF05299 M61 glycyl aminopeptidase J172_04506 PF01156 Inosine-uridine preferring nucleoside hydrolase J172_04507 PF13245 Part of AAA domain J172_04507 PF13538 UvrD-like helicase C-terminal domain J172_04510 PF00580 UvrD/REP helicase N-terminal domain J172_04510 PF12705 PD-(D/E)XK nuclease superfamily J172_04510 PF13361 UvrD-like helicase C-terminal domain J172_04511 PF04257 Exodeoxyribonuclease V, gamma subunit J172_04513 PF00005 ABC transporter J172_04514 PF02405 J172_04514 J172_04515 PF02470 J172_04515 J172_04516 PF05494 Toluene tolerance, Ttg2 J172_04517 PF13466 STAS domain J172_04518 PF04333 J172_04518 J172_04519 PF14534 Domain of unknown function (DUF4440) J172_04520 PF00255 Glutathione peroxidase J172_04522 PF02646 J172_04522 J172_04523 PF08240 Alcohol dehydrogenase GroES-like domain J172_04523 PF13602 Zinc-binding dehydrogenase J172_04524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J172_04524 PF03466 LysR substrate binding domain J172_04526 PF13410 Glutathione S-transferase, C-terminal domain J172_04526 PF13417 Glutathione S-transferase, N-terminal domain J172_04528 PF13520 Amino acid permease J172_04529 PF07971 Glycosyl hydrolase family 92 J172_04530 PF10947 J172_04530 J172_04531 PF00990 GGDEF domain J172_04531 PF01590 GAF domain J172_04531 PF08448 PAS fold J172_04532 PF05651 J172_04532 J172_04532 PF13556 PucR C-terminal helix-turn-helix domain J172_04533 PF02595 Glycerate kinase family J172_04534 PF07690 Major Facilitator Superfamily J172_04535 PF01244 Membrane dipeptidase (Peptidase family M19) J172_04537 PF10672 S-adenosylmethionine-dependent methyltransferase J172_04539 PF03741 J172_04539 J172_04540 PF01694 Rhomboid family J172_04541 PF03009 Glycerophosphoryl diester phosphodiesterase family J172_04542 PF00593 TonB dependent receptor J172_04542 PF07715 TonB-dependent Receptor Plug Domain J172_04543 PF01569 PAP2 superfamily J172_04544 PF01926 50S ribosome-binding GTPase J172_04544 PF10396 GTP-binding protein TrmE N-terminus J172_04544 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE J172_04545 PF00656 Caspase domain J172_04545 PF01522 Polysaccharide deacetylase J172_04545 PF13424 Tetratricopeptide repeat J172_04546 PF02096 60Kd inner membrane protein J172_04546 PF14849 YidC periplasmic domain J172_04547 PF00825 Ribonuclease P J172_04548 PF00468 Ribosomal protein L34