locus-tag class description Xdur_000005 PF00308 Bacterial dnaA protein Xdur_000005 PF08299 Bacterial dnaA protein helix-turn-helix Xdur_000005 PF11638 DnaA N-terminal domain Xdur_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain Xdur_000010 PF02767 DNA polymerase III beta subunit, central domain Xdur_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain Xdur_000015 PF02463 RecF/RecN/SMC N terminal domain Xdur_000020 PF00204 DNA gyrase B Xdur_000020 PF00986 DNA gyrase B subunit, carboxyl terminus Xdur_000020 PF18053 DNA gyrase B subunit insert domain Xdur_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_000020 PF01751 Toprim domain Xdur_000030 PF01435 Peptidase family M48 Xdur_000045 PF01618 MotA/TolQ/ExbB proton channel family Xdur_000050 PF02472 Biopolymer transport protein ExbD/TolR Xdur_000055 PF02472 Biopolymer transport protein ExbD/TolR Xdur_000060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Xdur_000070 PF13091 PLD-like domain Xdur_000070 PF13396 Phospholipase_D-nuclease N-terminal Xdur_000085 PF04055 Radical SAM superfamily Xdur_000095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Xdur_000110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Xdur_000110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Xdur_000115 PF13180 PDZ domain Xdur_000115 PF03572 Peptidase family S41 Xdur_000120 PF01551 Peptidase family M23 Xdur_000130 PF04389 Peptidase family M28 Xdur_000140 PF00150 Cellulase (glycosyl hydrolase family 5) Xdur_000150 PF00150 Cellulase (glycosyl hydrolase family 5) Xdur_000160 PF00150 Cellulase (glycosyl hydrolase family 5) Xdur_000165 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_000165 PF00107 Zinc-binding dehydrogenase Xdur_000175 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_000175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Xdur_000180 PF00310 Glutamine amidotransferases class-II Xdur_000180 PF04898 Glutamate synthase central domain Xdur_000180 PF01645 Conserved region in glutamate synthase Xdur_000180 PF01493 GXGXG motif Xdur_000210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_000210 PF03466 LysR substrate binding domain Xdur_000230 PF02397 Bacterial sugar transferase Xdur_000235 PF02350 UDP-N-acetylglucosamine 2-epimerase Xdur_000245 PF03808 Glycosyl transferase WecB/TagA/CpsF family Xdur_000250 PF13439 Glycosyltransferase Family 4 Xdur_000250 PF00534 Glycosyl transferases group 1 Xdur_000270 PF00733 Asparagine synthase Xdur_000270 PF13537 Glutamine amidotransferase domain Xdur_000285 PF16363 GDP-mannose 4,6 dehydratase Xdur_000300 PF00005 ABC transporter Xdur_000300 PF00664 ABC transporter transmembrane region Xdur_000310 PF00733 Asparagine synthase Xdur_000310 PF13537 Glutamine amidotransferase domain Xdur_000330 PF07475 HPr Serine kinase C-terminal domain Xdur_000330 PF02603 HPr Serine kinase N terminus Xdur_000335 PF00685 Sulfotransferase domain Xdur_000415 PF00271 Helicase conserved C-terminal domain Xdur_000415 PF00270 DEAD/DEAH box helicase Xdur_000415 PF09369 Domain of unknown function (DUF1998) Xdur_000420 PF03006 Haemolysin-III related Xdur_000440 PF00106 short chain dehydrogenase Xdur_000450 PF03466 LysR substrate binding domain Xdur_000450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_000465 PF02525 Flavodoxin-like fold Xdur_000555 PF05532 CsbD-like Xdur_000575 PF01447 Thermolysin metallopeptidase, catalytic domain Xdur_000575 PF02868 Thermolysin metallopeptidase, alpha-helical domain Xdur_000575 PF16485 Protealysin propeptide Xdur_000585 PF13344 Haloacid dehalogenase-like hydrolase Xdur_000585 PF00293 NUDIX domain Xdur_000600 PF00085 Thioredoxin Xdur_000605 PF08946 Osmosensory transporter coiled coil Xdur_000605 PF00083 Sugar (and other) transporter Xdur_000645 PF17863 AAA lid domain Xdur_000645 PF07726 ATPase family associated with various cellular activities (AAA) Xdur_000675 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Xdur_000680 PF00155 Aminotransferase class I and II Xdur_000685 PF00593 TonB dependent receptor Xdur_000685 PF07715 TonB-dependent Receptor Plug Domain Xdur_000695 PF07883 Cupin domain Xdur_000705 PF00171 Aldehyde dehydrogenase family Xdur_000725 PF02735 Ku70/Ku80 beta-barrel domain Xdur_000730 PF01070 FMN-dependent dehydrogenase Xdur_000735 PF00144 Beta-lactamase Xdur_000740 PF07730 Histidine kinase Xdur_000745 PF00072 Response regulator receiver domain Xdur_000745 PF00196 Bacterial regulatory proteins, luxR family Xdur_000765 PF18500 CadC C-terminal domain 1 Xdur_000765 PF00486 Transcriptional regulatory protein, C terminal Xdur_000770 PF07055 Enoyl reductase FAD binding domain Xdur_000770 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Xdur_000770 PF12241 Trans-2-enoyl-CoA reductase catalytic region Xdur_000780 PF00294 pfkB family carbohydrate kinase Xdur_000860 PF00128 Alpha amylase, catalytic domain Xdur_000860 PF11896 Domain of unknown function (DUF3416) Xdur_000865 PF16657 Maltogenic Amylase, C-terminal domain Xdur_000865 PF00128 Alpha amylase, catalytic domain Xdur_000870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Xdur_000870 PF02806 Alpha amylase, C-terminal all-beta domain Xdur_000870 PF00128 Alpha amylase, catalytic domain Xdur_000880 PF00248 Aldo/keto reductase family Xdur_000885 PF00135 Carboxylesterase family Xdur_000890 PF07859 alpha/beta hydrolase fold Xdur_000890 PF13472 GDSL-like Lipase/Acylhydrolase family Xdur_000900 PF03480 Bacterial extracellular solute-binding protein, family 7 Xdur_000910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Xdur_000915 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain Xdur_000915 PF04616 Glycosyl hydrolases family 43 Xdur_000920 PF00356 Bacterial regulatory proteins, lacI family Xdur_000925 PF04962 KduI/IolB family Xdur_000940 PF00657 GDSL-like Lipase/Acylhydrolase Xdur_000955 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Xdur_000960 PF01037 Lrp/AsnC ligand binding domain Xdur_000965 PF07660 Secretin and TonB N terminus short domain Xdur_000965 PF00593 TonB dependent receptor Xdur_000965 PF07715 TonB-dependent Receptor Plug Domain Xdur_000970 PF01734 Patatin-like phospholipase Xdur_000980 PF00005 ABC transporter Xdur_001010 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_001020 PF12867 DinB superfamily Xdur_001020 PF03781 Sulfatase-modifying factor enzyme 1 Xdur_001040 PF01381 Helix-turn-helix Xdur_001060 PF01883 Iron-sulfur cluster assembly protein Xdur_001060 PF10609 NUBPL iron-transfer P-loop NTPase Xdur_001075 PF13091 PLD-like domain Xdur_001080 PF03061 Thioesterase superfamily Xdur_001110 PF00107 Zinc-binding dehydrogenase Xdur_001110 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_001120 PF02673 Bacitracin resistance protein BacA Xdur_001125 PF00120 Glutamine synthetase, catalytic domain Xdur_001125 PF03951 Glutamine synthetase, beta-Grasp domain Xdur_001130 PF00543 Nitrogen regulatory protein P-II Xdur_001135 PF00909 Ammonium Transporter Family Xdur_001140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_001140 PF00512 His Kinase A (phospho-acceptor) domain Xdur_001140 PF00989 PAS fold Xdur_001145 PF02954 Bacterial regulatory protein, Fis family Xdur_001145 PF00158 Sigma-54 interaction domain Xdur_001145 PF00072 Response regulator receiver domain Xdur_001150 PF00080 Copper/zinc superoxide dismutase (SODC) Xdur_001155 PF00080 Copper/zinc superoxide dismutase (SODC) Xdur_001165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Xdur_001175 PF00108 Thiolase, N-terminal domain Xdur_001175 PF02803 Thiolase, C-terminal domain Xdur_001210 PF00581 Rhodanese-like domain Xdur_001215 PF02556 Preprotein translocase subunit SecB Xdur_001220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Xdur_001220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Xdur_001235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Xdur_001235 PF00205 Thiamine pyrophosphate enzyme, central domain Xdur_001235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Xdur_001240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_001245 PF02954 Bacterial regulatory protein, Fis family Xdur_001245 PF00072 Response regulator receiver domain Xdur_001245 PF00158 Sigma-54 interaction domain Xdur_001260 PF07690 Major Facilitator Superfamily Xdur_001265 PF00588 SpoU rRNA Methylase family Xdur_001280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Xdur_001280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Xdur_001285 PF02661 Fic/DOC family Xdur_001285 PF13784 Fic/DOC family N-terminal Xdur_001290 PF00561 alpha/beta hydrolase fold Xdur_001295 PF03692 Putative zinc- or iron-chelating domain Xdur_001300 PF00501 AMP-binding enzyme Xdur_001305 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Xdur_001315 PF07478 D-ala D-ala ligase C-terminus Xdur_001315 PF01820 D-ala D-ala ligase N-terminus Xdur_001325 PF03109 ABC1 family Xdur_001345 PF00472 RF-1 domain Xdur_001355 PF01112 Asparaginase Xdur_001360 PF01432 Peptidase family M3 Xdur_001365 PF12706 Beta-lactamase superfamily domain Xdur_001385 PF12833 Helix-turn-helix domain Xdur_001390 PF00999 Sodium/hydrogen exchanger family Xdur_001395 PF03466 LysR substrate binding domain Xdur_001395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_001400 PF01274 Malate synthase Xdur_001405 PF00463 Isocitrate lyase family Xdur_001410 PF00990 Diguanylate cyclase, GGDEF domain Xdur_001430 PF00326 Prolyl oligopeptidase family Xdur_001435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Xdur_001435 PF00289 Biotin carboxylase, N-terminal domain Xdur_001435 PF18140 Propionyl-coenzyme A carboxylase BT domain Xdur_001435 PF02785 Biotin carboxylase C-terminal domain Xdur_001435 PF00364 Biotin-requiring enzyme Xdur_001440 PF01039 Carboxyl transferase domain Xdur_001500 PF02492 CobW/HypB/UreG, nucleotide-binding domain Xdur_001500 PF07683 Cobalamin synthesis protein cobW C-terminal domain Xdur_001520 PF03969 AFG1-like ATPase Xdur_001525 PF01047 MarR family Xdur_001530 PF02566 OsmC-like protein Xdur_001555 PF16884 N-terminal domain of oxidoreductase Xdur_001555 PF00107 Zinc-binding dehydrogenase Xdur_001560 PF00248 Aldo/keto reductase family Xdur_001570 PF00849 RNA pseudouridylate synthase Xdur_001575 PF00593 TonB dependent receptor Xdur_001585 PF00270 DEAD/DEAH box helicase Xdur_001585 PF00271 Helicase conserved C-terminal domain Xdur_001585 PF04408 Helicase associated domain (HA2) Xdur_001585 PF08482 ATP-dependent helicase C-terminal Xdur_001590 PF07308 Protein of unknown function (DUF1456) Xdur_001595 PF00576 HIUase/Transthyretin family Xdur_001600 PF13454 FAD-NAD(P)-binding Xdur_001605 PF01014 Uricase Xdur_001605 PF09349 OHCU decarboxylase Xdur_001620 PF00266 Aminotransferase class-V Xdur_001625 PF07687 Peptidase dimerisation domain Xdur_001625 PF01546 Peptidase family M20/M25/M40 Xdur_001630 PF03466 LysR substrate binding domain Xdur_001630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_001635 PF07690 Major Facilitator Superfamily Xdur_001650 PF01425 Amidase Xdur_001655 PF01156 Inosine-uridine preferring nucleoside hydrolase Xdur_001665 PF00860 Permease family Xdur_001670 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_001675 PF00355 Rieske [2Fe-2S] domain Xdur_001680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_001680 PF03466 LysR substrate binding domain Xdur_001685 PF01026 TatD related DNase Xdur_001700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_001700 PF03466 LysR substrate binding domain Xdur_001705 PF07690 Major Facilitator Superfamily Xdur_001720 PF02146 Sir2 family Xdur_001725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Xdur_001730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Xdur_001730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Xdur_001740 PF00551 Formyl transferase Xdur_001745 PF00486 Transcriptional regulatory protein, C terminal Xdur_001745 PF00072 Response regulator receiver domain Xdur_001750 PF00512 His Kinase A (phospho-acceptor) domain Xdur_001750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_001750 PF00672 HAMP domain Xdur_001755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_001755 PF00529 HlyD membrane-fusion protein of T1SS Xdur_001760 PF00873 AcrB/AcrD/AcrF family Xdur_001765 PF02321 Outer membrane efflux protein Xdur_001775 PF02219 Methylenetetrahydrofolate reductase Xdur_001780 PF02677 Epoxyqueuosine reductase QueH Xdur_001785 PF03466 LysR substrate binding domain Xdur_001785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_001790 PF03358 NADPH-dependent FMN reductase Xdur_001800 PF08267 Cobalamin-independent synthase, N-terminal domain Xdur_001800 PF01717 Cobalamin-independent synthase, Catalytic domain Xdur_001805 PF03812 2-keto-3-deoxygluconate permease Xdur_001815 PF05368 NmrA-like family Xdur_001820 PF01638 HxlR-like helix-turn-helix Xdur_001850 PF00920 Dehydratase family Xdur_001865 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_001875 PF07690 Major Facilitator Superfamily Xdur_001880 PF01966 HD domain Xdur_001880 PF11871 Domain of unknown function (DUF3391) Xdur_001900 PF00171 Aldehyde dehydrogenase family Xdur_001910 PF01494 FAD binding domain Xdur_001920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Xdur_001920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Xdur_001925 PF00230 Major intrinsic protein Xdur_001930 PF01266 FAD dependent oxidoreductase Xdur_001930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Xdur_001935 PF08220 DeoR-like helix-turn-helix domain Xdur_001935 PF00455 DeoR C terminal sensor domain Xdur_001940 PF00970 Oxidoreductase FAD-binding domain Xdur_001940 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_001945 PF00355 Rieske [2Fe-2S] domain Xdur_001950 PF01144 Coenzyme A transferase Xdur_001955 PF01144 Coenzyme A transferase Xdur_001960 PF02803 Thiolase, C-terminal domain Xdur_001960 PF00108 Thiolase, N-terminal domain Xdur_001965 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Xdur_001965 PF00775 Dioxygenase Xdur_001975 PF00206 Lyase Xdur_001975 PF10397 Adenylosuccinate lyase C-terminus Xdur_001980 PF12146 Serine aminopeptidase, S33 Xdur_001985 PF02627 Carboxymuconolactone decarboxylase family Xdur_001995 PF01614 Bacterial transcriptional regulator Xdur_001995 PF09339 IclR helix-turn-helix domain Xdur_002005 PF07859 alpha/beta hydrolase fold Xdur_002010 PF10677 Protein of unknown function (DUF2490) Xdur_002015 PF13932 GidA associated domain Xdur_002015 PF01134 Glucose inhibited division protein A Xdur_002025 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_002045 PF13649 Methyltransferase domain Xdur_002055 PF12697 Alpha/beta hydrolase family Xdur_002065 PF00155 Aminotransferase class I and II Xdur_002070 PF06968 Biotin and Thiamin Synthesis associated domain Xdur_002070 PF04055 Radical SAM superfamily Xdur_002080 PF01040 UbiA prenyltransferase family Xdur_002095 PF05819 NolX protein Xdur_002135 PF01313 Bacterial export proteins, family 3 Xdur_002140 PF00813 FliP family Xdur_002155 PF00771 FHIPEP family Xdur_002160 PF01312 FlhB HrpN YscU SpaS Family Xdur_002175 PF01514 Secretory protein of YscJ/FliF family Xdur_002190 PF02874 ATP synthase alpha/beta family, beta-barrel domain Xdur_002190 PF18269 T3SS EscN ATPase C-terminal domain Xdur_002190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Xdur_002200 PF01311 Bacterial export proteins, family 1 Xdur_002205 PF00263 Bacterial type II and III secretion system protein Xdur_002205 PF03958 Bacterial type II/III secretion system short domain Xdur_002215 PF01464 Transglycosylase SLT domain Xdur_002230 PF00924 Mechanosensitive ion channel Xdur_002230 PF12795 Mechanosensitive ion channel porin domain Xdur_002230 PF12794 Mechanosensitive ion channel inner membrane domain 1 Xdur_002235 PF00884 Sulfatase Xdur_002240 PF03109 ABC1 family Xdur_002245 PF05661 Protein of unknown function (DUF808) Xdur_002250 PF00990 Diguanylate cyclase, GGDEF domain Xdur_002255 PF08323 Starch synthase catalytic domain Xdur_002255 PF00534 Glycosyl transferases group 1 Xdur_002260 PF00128 Alpha amylase, catalytic domain Xdur_002260 PF02806 Alpha amylase, C-terminal all-beta domain Xdur_002260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Xdur_002265 PF11941 Domain of unknown function (DUF3459) Xdur_002265 PF00128 Alpha amylase, catalytic domain Xdur_002265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Xdur_002270 PF02446 4-alpha-glucanotransferase Xdur_002275 PF00128 Alpha amylase, catalytic domain Xdur_002285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Xdur_002285 PF00128 Alpha amylase, catalytic domain Xdur_002290 PF13460 NAD(P)H-binding Xdur_002305 PF06903 VirK protein Xdur_002325 PF00873 AcrB/AcrD/AcrF family Xdur_002340 PF00270 DEAD/DEAH box helicase Xdur_002340 PF00271 Helicase conserved C-terminal domain Xdur_002345 PF00364 Biotin-requiring enzyme Xdur_002345 PF02817 e3 binding domain Xdur_002345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Xdur_002355 PF02779 Transketolase, pyrimidine binding domain Xdur_002355 PF02780 Transketolase, C-terminal domain Xdur_002360 PF00676 Dehydrogenase E1 component Xdur_002370 PF03301 Tryptophan 2,3-dioxygenase Xdur_002375 PF00854 POT family Xdur_002385 PF01047 MarR family Xdur_002390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Xdur_002400 PF04209 homogentisate 1,2-dioxygenase Xdur_002415 PF03334 Na+/H+ antiporter subunit Xdur_002420 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Xdur_002430 PF00361 Proton-conducting membrane transporter Xdur_002435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Xdur_002440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Xdur_002440 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Xdur_002440 PF00361 Proton-conducting membrane transporter Xdur_002440 PF13244 Domain of unknown function (DUF4040) Xdur_002455 PF02868 Thermolysin metallopeptidase, alpha-helical domain Xdur_002455 PF01447 Thermolysin metallopeptidase, catalytic domain Xdur_002455 PF01483 Proprotein convertase P-domain Xdur_002455 PF07504 Fungalysin/Thermolysin Propeptide Motif Xdur_002460 PF00182 Chitinase class I Xdur_002480 PF01259 SAICAR synthetase Xdur_002485 PF05099 Tellurite resistance protein TerB Xdur_002485 PF00226 DnaJ domain Xdur_002495 PF00834 Ribulose-phosphate 3 epimerase family Xdur_002500 PF00583 Acetyltransferase (GNAT) family Xdur_002505 PF00781 Diacylglycerol kinase catalytic domain Xdur_002510 PF00425 chorismate binding enzyme Xdur_002510 PF04715 Anthranilate synthase component I, N terminal region Xdur_002520 PF00117 Glutamine amidotransferase class-I Xdur_002530 PF02885 Glycosyl transferase family, helical bundle domain Xdur_002530 PF00591 Glycosyl transferase family, a/b domain Xdur_002535 PF00218 Indole-3-glycerol phosphate synthase Xdur_002545 PF00027 Cyclic nucleotide-binding domain Xdur_002545 PF00325 Bacterial regulatory proteins, crp family Xdur_002550 PF02675 S-adenosylmethionine decarboxylase Xdur_002555 PF00893 Small Multidrug Resistance protein Xdur_002560 PF03232 Ubiquinone biosynthesis protein COQ7 Xdur_002565 PF00572 Ribosomal protein L13 Xdur_002570 PF00380 Ribosomal protein S9/S16 Xdur_002585 PF00293 NUDIX domain Xdur_002595 PF00210 Ferritin-like domain Xdur_002600 PF00672 HAMP domain Xdur_002600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_002600 PF01627 Hpt domain Xdur_002600 PF00072 Response regulator receiver domain Xdur_002600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Xdur_002600 PF00512 His Kinase A (phospho-acceptor) domain Xdur_002605 PF00072 Response regulator receiver domain Xdur_002605 PF00486 Transcriptional regulatory protein, C terminal Xdur_002625 PF01521 Iron-sulphur cluster biosynthesis Xdur_002635 PF00293 NUDIX domain Xdur_002635 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Xdur_002635 PF09297 NADH pyrophosphatase zinc ribbon domain Xdur_002640 PF17113 Regulatory signalling modulator protein AmpE Xdur_002640 PF03186 CobD/Cbib protein Xdur_002660 PF07690 Major Facilitator Superfamily Xdur_002665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_002665 PF03466 LysR substrate binding domain Xdur_002670 PF07690 Major Facilitator Superfamily Xdur_002675 PF12805 FUSC-like inner membrane protein yccS Xdur_002685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Xdur_002685 PF02843 Phosphoribosylglycinamide synthetase, C domain Xdur_002685 PF02844 Phosphoribosylglycinamide synthetase, N domain Xdur_002695 PF01808 AICARFT/IMPCHase bienzyme Xdur_002695 PF02142 MGS-like domain Xdur_002700 PF01066 CDP-alcohol phosphatidyltransferase Xdur_002705 PF12146 Serine aminopeptidase, S33 Xdur_002705 PF12147 Putative methyltransferase Xdur_002710 PF00782 Dual specificity phosphatase, catalytic domain Xdur_002740 PF02954 Bacterial regulatory protein, Fis family Xdur_002775 PF02785 Biotin carboxylase C-terminal domain Xdur_002775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Xdur_002775 PF00289 Biotin carboxylase, N-terminal domain Xdur_002785 PF00364 Biotin-requiring enzyme Xdur_002790 PF01220 Dehydroquinase class II Xdur_002795 PF11412 Disulphide bond corrector protein DsbC Xdur_002795 PF02683 Cytochrome C biogenesis protein transmembrane region Xdur_002800 PF03091 CutA1 divalent ion tolerance protein Xdur_002815 PF01852 START domain Xdur_002825 PF00106 short chain dehydrogenase Xdur_002830 PF04231 Endonuclease I Xdur_002840 PF00166 Chaperonin 10 Kd subunit Xdur_002845 PF00118 TCP-1/cpn60 chaperonin family Xdur_002855 PF07715 TonB-dependent Receptor Plug Domain Xdur_002855 PF00593 TonB dependent receptor Xdur_002860 PF00793 DAHP synthetase I family Xdur_002875 PF08450 SMP-30/Gluconolactonase/LRE-like region Xdur_002885 PF03710 Glutamate-ammonia ligase adenylyltransferase Xdur_002885 PF08335 GlnD PII-uridylyltransferase Xdur_002890 PF02592 Putative vitamin uptake transporter Xdur_002905 PF00881 Nitroreductase family Xdur_002910 PF04264 YceI-like domain Xdur_002935 PF16957 Malonate decarboxylase, alpha subunit, transporter Xdur_002940 PF06857 Malonate decarboxylase delta subunit (MdcD) Xdur_002945 PF01039 Carboxyl transferase domain Xdur_002955 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG Xdur_002960 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase Xdur_002965 PF00698 Acyl transferase domain Xdur_002975 PF00392 Bacterial regulatory proteins, gntR family Xdur_002975 PF07729 FCD domain Xdur_002980 PF13419 Haloacid dehalogenase-like hydrolase Xdur_003010 PF07745 Glycosyl hydrolase family 53 Xdur_003015 PF17831 Pyruvate dehydrogenase E1 component middle domain Xdur_003015 PF00456 Transketolase, thiamine diphosphate binding domain Xdur_003020 PF00145 C-5 cytosine-specific DNA methylase Xdur_003030 PF00106 short chain dehydrogenase Xdur_003045 PF00106 short chain dehydrogenase Xdur_003055 PF13409 Glutathione S-transferase, N-terminal domain Xdur_003080 PF12823 Domain of unknown function (DUF3817) Xdur_003080 PF03176 MMPL family Xdur_003085 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Xdur_003085 PF00326 Prolyl oligopeptidase family Xdur_003090 PF07759 Protein of unknown function (DUF1615) Xdur_003095 PF00990 Diguanylate cyclase, GGDEF domain Xdur_003125 PF00892 EamA-like transporter family Xdur_003130 PF00497 Bacterial extracellular solute-binding proteins, family 3 Xdur_003140 PF00324 Amino acid permease Xdur_003150 PF01544 CorA-like Mg2+ transporter protein Xdur_003160 PF01204 Trehalase Xdur_003170 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Xdur_003170 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Xdur_003195 PF08448 PAS fold Xdur_003195 PF08447 PAS fold Xdur_003195 PF00990 Diguanylate cyclase, GGDEF domain Xdur_003195 PF00563 EAL domain Xdur_003200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_003200 PF00672 HAMP domain Xdur_003200 PF02203 Tar ligand binding domain homologue Xdur_003205 PF00150 Cellulase (glycosyl hydrolase family 5) Xdur_003205 PF00553 Cellulose binding domain Xdur_003210 PF00916 Sulfate permease family Xdur_003210 PF01740 STAS domain Xdur_003215 PF00990 Diguanylate cyclase, GGDEF domain Xdur_003225 PF13632 Glycosyl transferase family group 2 Xdur_003240 PF04397 LytTr DNA-binding domain Xdur_003240 PF00072 Response regulator receiver domain Xdur_003245 PF03900 Porphobilinogen deaminase, C-terminal domain Xdur_003245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Xdur_003270 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Xdur_003270 PF00326 Prolyl oligopeptidase family Xdur_003280 PF00155 Aminotransferase class I and II Xdur_003285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Xdur_003285 PF00326 Prolyl oligopeptidase family Xdur_003290 PF04304 Protein of unknown function (DUF454) Xdur_003300 PF01678 Diaminopimelate epimerase Xdur_003310 PF02899 Phage integrase, N-terminal SAM-like domain Xdur_003310 PF00589 Phage integrase family Xdur_003315 PF00227 Proteasome subunit Xdur_003320 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_003320 PF07724 AAA domain (Cdc48 subfamily) Xdur_003320 PF10431 C-terminal, D2-small domain, of ClpB protein Xdur_003330 PF13673 Acetyltransferase (GNAT) domain Xdur_003335 PF13533 Biotin-lipoyl like Xdur_003345 PF01209 ubiE/COQ5 methyltransferase family Xdur_003350 PF00990 Diguanylate cyclase, GGDEF domain Xdur_003350 PF03707 Bacterial signalling protein N terminal repeat Xdur_003350 PF00563 EAL domain Xdur_003355 PF11838 ERAP1-like C-terminal domain Xdur_003355 PF01433 Peptidase family M1 domain Xdur_003370 PF13360 PQQ-like domain Xdur_003375 PF00497 Bacterial extracellular solute-binding proteins, family 3 Xdur_003390 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_003390 PF00107 Zinc-binding dehydrogenase Xdur_003400 PF01590 GAF domain Xdur_003400 PF02954 Bacterial regulatory protein, Fis family Xdur_003400 PF00158 Sigma-54 interaction domain Xdur_003405 PF00294 pfkB family carbohydrate kinase Xdur_003415 PF04085 rod shape-determining protein MreC Xdur_003425 PF00905 Penicillin binding protein transpeptidase domain Xdur_003425 PF03717 Penicillin-binding Protein dimerisation domain Xdur_003430 PF01098 Cell cycle protein Xdur_003435 PF00295 Glycosyl hydrolases family 28 Xdur_003440 PF13406 Transglycosylase SLT domain Xdur_003445 PF05036 Sporulation related domain Xdur_003445 PF03330 Lytic transglycolase Xdur_003450 PF00768 D-alanyl-D-alanine carboxypeptidase Xdur_003450 PF07943 Penicillin-binding protein 5, C-terminal domain Xdur_003460 PF04359 Protein of unknown function (DUF493) Xdur_003465 PF03099 Biotin/lipoate A/B protein ligase family Xdur_003470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Xdur_003470 PF04055 Radical SAM superfamily Xdur_003475 PF17804 Tail specific protease N-terminal domain Xdur_003475 PF00595 PDZ domain Xdur_003475 PF03572 Peptidase family S41 Xdur_003475 PF11818 C-terminal domain of tail specific protease (DUF3340) Xdur_003485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_003485 PF03466 LysR substrate binding domain Xdur_003495 PF01467 Cytidylyltransferase-like Xdur_003495 PF00293 NUDIX domain Xdur_003530 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Xdur_003530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Xdur_003535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Xdur_003535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Xdur_003540 PF04972 BON domain Xdur_003545 PF00512 His Kinase A (phospho-acceptor) domain Xdur_003545 PF08446 PAS fold Xdur_003545 PF00360 Phytochrome region Xdur_003545 PF01590 GAF domain Xdur_003545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_003550 PF00072 Response regulator receiver domain Xdur_003555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_003555 PF00512 His Kinase A (phospho-acceptor) domain Xdur_003560 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Xdur_003565 PF00106 short chain dehydrogenase Xdur_003605 PF00263 Bacterial type II and III secretion system protein Xdur_003605 PF03958 Bacterial type II/III secretion system short domain Xdur_003610 PF00437 Type II/IV secretion system protein Xdur_003615 PF00482 Type II secretion system (T2SS), protein F Xdur_003620 PF07963 Prokaryotic N-terminal methylation motif Xdur_003620 PF08334 Type II secretion system (T2SS), protein G Xdur_003625 PF12019 Type II transport protein GspH Xdur_003625 PF07963 Prokaryotic N-terminal methylation motif Xdur_003630 PF07963 Prokaryotic N-terminal methylation motif Xdur_003630 PF02501 Type II secretion system (T2SS), protein I Xdur_003635 PF11612 Type II secretion system (T2SS), protein J Xdur_003635 PF07963 Prokaryotic N-terminal methylation motif Xdur_003640 PF03934 Type II secretion system (T2SS), protein K Xdur_003665 PF16355 Domain of unknown function (DUF4982) Xdur_003665 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Xdur_003665 PF00703 Glycosyl hydrolases family 2 Xdur_003665 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Xdur_003665 PF02837 Glycosyl hydrolases family 2, sugar binding domain Xdur_003680 PF00392 Bacterial regulatory proteins, gntR family Xdur_003680 PF07702 UTRA domain Xdur_003685 PF07690 Major Facilitator Superfamily Xdur_003690 PF00356 Bacterial regulatory proteins, lacI family Xdur_003695 PF01380 SIS domain Xdur_003700 PF01979 Amidohydrolase family Xdur_003710 PF01966 HD domain Xdur_003710 PF01743 Poly A polymerase head domain Xdur_003710 PF12627 Probable RNA and SrmB- binding site of polymerase A Xdur_003715 PF00732 GMC oxidoreductase Xdur_003715 PF05199 GMC oxidoreductase Xdur_003720 PF00171 Aldehyde dehydrogenase family Xdur_003725 PF02028 BCCT, betaine/carnitine/choline family transporter Xdur_003740 PF01323 DSBA-like thioredoxin domain Xdur_003750 PF00034 Cytochrome c Xdur_003755 PF01926 50S ribosome-binding GTPase Xdur_003760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Xdur_003760 PF10996 Beta-Casp domain Xdur_003760 PF00753 Metallo-beta-lactamase superfamily Xdur_003770 PF04107 Glutamate-cysteine ligase family 2(GCS2) Xdur_003775 PF00672 HAMP domain Xdur_003775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_003775 PF00512 His Kinase A (phospho-acceptor) domain Xdur_003780 PF00072 Response regulator receiver domain Xdur_003780 PF00486 Transcriptional regulatory protein, C terminal Xdur_003795 PF02583 Metal-sensitive transcriptional repressor Xdur_003800 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_003800 PF00107 Zinc-binding dehydrogenase Xdur_003805 PF04828 Glutathione-dependent formaldehyde-activating enzyme Xdur_003810 PF00756 Putative esterase Xdur_003820 PF00392 Bacterial regulatory proteins, gntR family Xdur_003820 PF00155 Aminotransferase class I and II Xdur_003825 PF02567 Phenazine biosynthesis-like protein Xdur_003830 PF00892 EamA-like transporter family Xdur_003840 PF12848 ABC transporter Xdur_003840 PF00005 ABC transporter Xdur_003850 PF00464 Serine hydroxymethyltransferase Xdur_003855 PF03477 ATP cone domain Xdur_003865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Xdur_003865 PF01872 RibD C-terminal domain Xdur_003875 PF00677 Lumazine binding domain Xdur_003880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Xdur_003880 PF00925 GTP cyclohydrolase II Xdur_003885 PF00885 6,7-dimethyl-8-ribityllumazine synthase Xdur_003890 PF01029 NusB family Xdur_003895 PF00586 AIR synthase related protein, N-terminal domain Xdur_003895 PF02769 AIR synthase related protein, C-terminal domain Xdur_003915 PF03814 Potassium-transporting ATPase A subunit Xdur_003925 PF02669 K+-transporting ATPase, c chain Xdur_003930 PF13493 Domain of unknown function (DUF4118) Xdur_003930 PF13492 GAF domain Xdur_003930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_003930 PF00512 His Kinase A (phospho-acceptor) domain Xdur_003930 PF02702 Osmosensitive K+ channel His kinase sensor domain Xdur_003935 PF00072 Response regulator receiver domain Xdur_003935 PF00486 Transcriptional regulatory protein, C terminal Xdur_003950 PF02913 FAD linked oxidases, C-terminal domain Xdur_003950 PF01565 FAD binding domain Xdur_003955 PF04307 LexA-binding, inner membrane-associated putative hydrolase Xdur_003960 PF02021 Uncharacterised protein family UPF0102 Xdur_003970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Xdur_003990 PF02381 MraZ protein, putative antitoxin-like Xdur_003995 PF01795 MraW methylase family Xdur_004000 PF04999 Cell division protein FtsL Xdur_004005 PF00905 Penicillin binding protein transpeptidase domain Xdur_004005 PF03717 Penicillin-binding Protein dimerisation domain Xdur_004010 PF01225 Mur ligase family, catalytic domain Xdur_004010 PF02875 Mur ligase family, glutamate ligase domain Xdur_004010 PF08245 Mur ligase middle domain Xdur_004015 PF01225 Mur ligase family, catalytic domain Xdur_004015 PF02875 Mur ligase family, glutamate ligase domain Xdur_004015 PF08245 Mur ligase middle domain Xdur_004020 PF00953 Glycosyl transferase family 4 Xdur_004025 PF01098 Cell cycle protein Xdur_004030 PF03033 Glycosyltransferase family 28 N-terminal domain Xdur_004030 PF04101 Glycosyltransferase family 28 C-terminal domain Xdur_004035 PF01225 Mur ligase family, catalytic domain Xdur_004035 PF02875 Mur ligase family, glutamate ligase domain Xdur_004035 PF08245 Mur ligase middle domain Xdur_004040 PF07478 D-ala D-ala ligase C-terminus Xdur_004040 PF01820 D-ala D-ala ligase N-terminus Xdur_004045 PF08478 POTRA domain, FtsQ-type Xdur_004045 PF03799 Cell division protein FtsQ Xdur_004050 PF02491 SHS2 domain inserted in FTSA Xdur_004055 PF12327 FtsZ family, C-terminal domain Xdur_004055 PF00091 Tubulin/FtsZ family, GTPase domain Xdur_004060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Xdur_004070 PF01476 LysM domain Xdur_004070 PF08525 Opacity-associated protein A N-terminal motif Xdur_004070 PF01551 Peptidase family M23 Xdur_004075 PF02810 SEC-C motif Xdur_004075 PF07517 SecA DEAD-like domain Xdur_004075 PF07516 SecA Wing and Scaffold domain Xdur_004075 PF01043 SecA preprotein cross-linking domain Xdur_004080 PF00293 NUDIX domain Xdur_004090 PF02219 Methylenetetrahydrofolate reductase Xdur_004100 PF00698 Acyl transferase domain Xdur_004100 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_004100 PF00107 Zinc-binding dehydrogenase Xdur_004100 PF16197 Ketoacyl-synthetase C-terminal extension Xdur_004100 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_004100 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_004100 PF08659 KR domain Xdur_004100 PF00550 Phosphopantetheine attachment site Xdur_004100 PF14765 Polyketide synthase dehydratase Xdur_004105 PF09286 Pro-kumamolisin, activation domain Xdur_004105 PF00082 Subtilase family Xdur_004110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Xdur_004115 PF00128 Alpha amylase, catalytic domain Xdur_004145 PF13649 Methyltransferase domain Xdur_004150 PF05221 S-adenosyl-L-homocysteine hydrolase Xdur_004150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Xdur_004160 PF00311 Phosphoenolpyruvate carboxylase Xdur_004195 PF00328 Histidine phosphatase superfamily (branch 2) Xdur_004200 PF02773 S-adenosylmethionine synthetase, C-terminal domain Xdur_004200 PF02772 S-adenosylmethionine synthetase, central domain Xdur_004200 PF00438 S-adenosylmethionine synthetase, N-terminal domain Xdur_004210 PF13649 Methyltransferase domain Xdur_004215 PF01207 Dihydrouridine synthase (Dus) Xdur_004225 PF00294 pfkB family carbohydrate kinase Xdur_004230 PF07670 Nucleoside recognition Xdur_004230 PF07662 Na+ dependent nucleoside transporter C-terminus Xdur_004230 PF01773 Na+ dependent nucleoside transporter N-terminus Xdur_004235 PF00248 Aldo/keto reductase family Xdur_004245 PF00593 TonB dependent receptor Xdur_004245 PF07715 TonB-dependent Receptor Plug Domain Xdur_004265 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_004270 PF00005 ABC transporter Xdur_004280 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Xdur_004290 PF00005 ABC transporter Xdur_004295 PF13472 GDSL-like Lipase/Acylhydrolase family Xdur_004300 PF00486 Transcriptional regulatory protein, C terminal Xdur_004300 PF00072 Response regulator receiver domain Xdur_004305 PF00512 His Kinase A (phospho-acceptor) domain Xdur_004305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_004305 PF08521 Two-component sensor kinase N-terminal Xdur_004315 PF01219 Prokaryotic diacylglycerol kinase Xdur_004335 PF01790 Prolipoprotein diacylglyceryl transferase Xdur_004340 PF00303 Thymidylate synthase Xdur_004350 PF00186 Dihydrofolate reductase Xdur_004355 PF00158 Sigma-54 interaction domain Xdur_004360 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Xdur_004360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_004365 PF00005 ABC transporter Xdur_004370 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_004380 PF00296 Luciferase-like monooxygenase Xdur_004385 PF03358 NADPH-dependent FMN reductase Xdur_004405 PF00296 Luciferase-like monooxygenase Xdur_004410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Xdur_004415 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_004420 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_004420 PF12911 N-terminal TM domain of oligopeptide transport permease C Xdur_004425 PF00005 ABC transporter Xdur_004425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Xdur_004430 PF00149 Calcineurin-like phosphoesterase Xdur_004435 PF04379 ApaG domain Xdur_004440 PF00398 Ribosomal RNA adenine dimethylase Xdur_004445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Xdur_004450 PF00639 PPIC-type PPIASE domain Xdur_004450 PF09312 SurA N-terminal domain Xdur_004455 PF04453 LPS transport system D Xdur_004455 PF03968 OstA-like protein Xdur_004470 PF00850 Histone deacetylase domain Xdur_004475 PF01923 Cobalamin adenosyltransferase Xdur_004485 PF01494 FAD binding domain Xdur_004490 PF01494 FAD binding domain Xdur_004510 PF07729 FCD domain Xdur_004510 PF00392 Bacterial regulatory proteins, gntR family Xdur_004515 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Xdur_004520 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Xdur_004520 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit Xdur_004525 PF03466 LysR substrate binding domain Xdur_004525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_004535 PF00171 Aldehyde dehydrogenase family Xdur_004540 PF00378 Enoyl-CoA hydratase/isomerase Xdur_004560 PF08450 SMP-30/Gluconolactonase/LRE-like region Xdur_004565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Xdur_004565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Xdur_004575 PF01728 FtsJ-like methyltransferase Xdur_004575 PF18125 RlmM ferredoxin-like domain Xdur_004600 PF00892 EamA-like transporter family Xdur_004605 PF00749 tRNA synthetases class I (E and Q), catalytic domain Xdur_004605 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Xdur_004620 PF00990 Diguanylate cyclase, GGDEF domain Xdur_004620 PF00072 Response regulator receiver domain Xdur_004625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Xdur_004625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_004625 PF00512 His Kinase A (phospho-acceptor) domain Xdur_004625 PF00072 Response regulator receiver domain Xdur_004625 PF00672 HAMP domain Xdur_004625 PF01627 Hpt domain Xdur_004630 PF00072 Response regulator receiver domain Xdur_004630 PF00196 Bacterial regulatory proteins, luxR family Xdur_004640 PF01625 Peptide methionine sulfoxide reductase Xdur_004650 PF00923 Transaldolase/Fructose-6-phosphate aldolase Xdur_004655 PF14760 Rnk N-terminus Xdur_004655 PF01272 Transcription elongation factor, GreA/GreB, C-term Xdur_004660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_004660 PF03466 LysR substrate binding domain Xdur_004665 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_004665 PF13192 Thioredoxin domain Xdur_004670 PF10417 C-terminal domain of 1-Cys peroxiredoxin Xdur_004670 PF00578 AhpC/TSA family Xdur_004675 PF17827 PrmC N-terminal domain Xdur_004675 PF05175 Methyltransferase small domain Xdur_004680 PF00561 alpha/beta hydrolase fold Xdur_004690 PF00293 NUDIX domain Xdur_004695 PF01367 5'-3' exonuclease, C-terminal SAM fold Xdur_004695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Xdur_004695 PF01612 3'-5' exonuclease Xdur_004695 PF00476 DNA polymerase family A Xdur_004725 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Xdur_004725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Xdur_004725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Xdur_004745 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Xdur_004750 PF02233 NAD(P) transhydrogenase beta subunit Xdur_004765 PF01063 Amino-transferase class IV Xdur_004770 PF04151 Bacterial pre-peptidase C-terminal domain Xdur_004770 PF00082 Subtilase family Xdur_004775 PF04151 Bacterial pre-peptidase C-terminal domain Xdur_004775 PF00082 Subtilase family Xdur_004780 PF04151 Bacterial pre-peptidase C-terminal domain Xdur_004780 PF00082 Subtilase family Xdur_004785 PF04073 Aminoacyl-tRNA editing domain Xdur_004805 PF03358 NADPH-dependent FMN reductase Xdur_004810 PF03631 Virulence factor BrkB Xdur_004815 PF08534 Redoxin Xdur_004820 PF00708 Acylphosphatase Xdur_004830 PF03976 Polyphosphate kinase 2 (PPK2) Xdur_004835 PF00994 Probable molybdopterin binding domain Xdur_004845 PF03462 PCRF domain Xdur_004845 PF00472 RF-1 domain Xdur_004850 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Xdur_004850 PF01488 Shikimate / quinate 5-dehydrogenase Xdur_004850 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Xdur_004860 PF03550 Outer membrane lipoprotein LolB Xdur_004865 PF08544 GHMP kinases C terminal Xdur_004865 PF00288 GHMP kinases N terminal domain Xdur_004875 PF14572 Phosphoribosyl synthetase-associated domain Xdur_004875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Xdur_004880 PF01386 Ribosomal L25p family Xdur_004880 PF14693 Ribosomal protein TL5, C-terminal domain Xdur_004885 PF01195 Peptidyl-tRNA hydrolase Xdur_004890 PF06071 Protein of unknown function (DUF933) Xdur_004890 PF01926 50S ribosome-binding GTPase Xdur_004910 PF00009 Elongation factor Tu GTP binding domain Xdur_004910 PF03143 Elongation factor Tu C-terminal domain Xdur_004910 PF03144 Elongation factor Tu domain 2 Xdur_004920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Xdur_004925 PF00467 KOW motif Xdur_004925 PF02357 Transcription termination factor nusG Xdur_004930 PF03946 Ribosomal protein L11, N-terminal domain Xdur_004930 PF00298 Ribosomal protein L11, RNA binding domain Xdur_004935 PF00687 Ribosomal protein L1p/L10e family Xdur_004940 PF00466 Ribosomal protein L10 Xdur_004945 PF00542 Ribosomal protein L7/L12 C-terminal domain Xdur_004945 PF16320 Ribosomal protein L7/L12 dimerisation domain Xdur_004950 PF00562 RNA polymerase Rpb2, domain 6 Xdur_004950 PF04563 RNA polymerase beta subunit Xdur_004950 PF04561 RNA polymerase Rpb2, domain 2 Xdur_004950 PF04565 RNA polymerase Rpb2, domain 3 Xdur_004950 PF10385 RNA polymerase beta subunit external 1 domain Xdur_004950 PF04560 RNA polymerase Rpb2, domain 7 Xdur_004955 PF04998 RNA polymerase Rpb1, domain 5 Xdur_004955 PF05000 RNA polymerase Rpb1, domain 4 Xdur_004955 PF04983 RNA polymerase Rpb1, domain 3 Xdur_004955 PF04997 RNA polymerase Rpb1, domain 1 Xdur_004955 PF00623 RNA polymerase Rpb1, domain 2 Xdur_004960 PF00164 Ribosomal protein S12/S23 Xdur_004965 PF00177 Ribosomal protein S7p/S5e Xdur_004970 PF00009 Elongation factor Tu GTP binding domain Xdur_004970 PF14492 Elongation Factor G, domain II Xdur_004970 PF03144 Elongation factor Tu domain 2 Xdur_004970 PF00679 Elongation factor G C-terminus Xdur_004970 PF03764 Elongation factor G, domain IV Xdur_004975 PF00009 Elongation factor Tu GTP binding domain Xdur_004975 PF03143 Elongation factor Tu C-terminal domain Xdur_004975 PF03144 Elongation factor Tu domain 2 Xdur_004980 PF00338 Ribosomal protein S10p/S20e Xdur_004985 PF00297 Ribosomal protein L3 Xdur_004990 PF00573 Ribosomal protein L4/L1 family Xdur_004995 PF00276 Ribosomal protein L23 Xdur_005000 PF00181 Ribosomal Proteins L2, RNA binding domain Xdur_005000 PF03947 Ribosomal Proteins L2, C-terminal domain Xdur_005005 PF00203 Ribosomal protein S19 Xdur_005010 PF00237 Ribosomal protein L22p/L17e Xdur_005015 PF07650 KH domain Xdur_005015 PF00189 Ribosomal protein S3, C-terminal domain Xdur_005020 PF00252 Ribosomal protein L16p/L10e Xdur_005025 PF00831 Ribosomal L29 protein Xdur_005030 PF00366 Ribosomal protein S17 Xdur_005035 PF00238 Ribosomal protein L14p/L23e Xdur_005040 PF00467 KOW motif Xdur_005040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Xdur_005045 PF00281 Ribosomal protein L5 Xdur_005045 PF00673 ribosomal L5P family C-terminus Xdur_005050 PF00253 Ribosomal protein S14p/S29e Xdur_005055 PF00410 Ribosomal protein S8 Xdur_005060 PF00347 Ribosomal protein L6 Xdur_005065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Xdur_005070 PF00333 Ribosomal protein S5, N-terminal domain Xdur_005070 PF03719 Ribosomal protein S5, C-terminal domain Xdur_005075 PF00327 Ribosomal protein L30p/L7e Xdur_005080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Xdur_005085 PF00344 SecY translocase Xdur_005090 PF00416 Ribosomal protein S13/S18 Xdur_005095 PF00411 Ribosomal protein S11 Xdur_005100 PF01479 S4 domain Xdur_005100 PF00163 Ribosomal protein S4/S9 N-terminal domain Xdur_005105 PF01000 RNA polymerase Rpb3/RpoA insert domain Xdur_005105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Xdur_005105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Xdur_005110 PF01196 Ribosomal protein L17 Xdur_005115 PF02600 Disulfide bond formation protein DsbB Xdur_005130 PF01474 Class-II DAHP synthetase family Xdur_005140 PF01425 Amidase Xdur_005150 PF03144 Elongation factor Tu domain 2 Xdur_005150 PF00009 Elongation factor Tu GTP binding domain Xdur_005150 PF00679 Elongation factor G C-terminus Xdur_005155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Xdur_005160 PF00056 lactate/malate dehydrogenase, NAD binding domain Xdur_005160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Xdur_005165 PF02798 Glutathione S-transferase, N-terminal domain Xdur_005165 PF00043 Glutathione S-transferase, C-terminal domain Xdur_005175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Xdur_005175 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_005180 PF00107 Zinc-binding dehydrogenase Xdur_005180 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_005185 PF00691 OmpA family Xdur_005185 PF05736 OprF membrane domain Xdur_005195 PF00849 RNA pseudouridylate synthase Xdur_005205 PF00155 Aminotransferase class I and II Xdur_005215 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_005220 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_005225 PF00005 ABC transporter Xdur_005225 PF17850 CysA C-terminal regulatory domain Xdur_005225 PF12857 TOBE-like domain Xdur_005235 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_005235 PF00107 Zinc-binding dehydrogenase Xdur_005250 PF05506 Domain of unknown function (DUF756) Xdur_005250 PF04185 Phosphoesterase family Xdur_005260 PF10459 Peptidase S46 Xdur_005265 PF00300 Histidine phosphatase superfamily (branch 1) Xdur_005270 PF02875 Mur ligase family, glutamate ligase domain Xdur_005270 PF08245 Mur ligase middle domain Xdur_005285 PF00156 Phosphoribosyl transferase domain Xdur_005290 PF04305 Protein of unknown function (DUF455) Xdur_005305 PF00149 Calcineurin-like phosphoesterase Xdur_005310 PF01569 PAP2 superfamily Xdur_005315 PF00534 Glycosyl transferases group 1 Xdur_005315 PF13439 Glycosyltransferase Family 4 Xdur_005320 PF02541 Ppx/GppA phosphatase family Xdur_005325 PF02503 Polyphosphate kinase middle domain Xdur_005325 PF13089 Polyphosphate kinase N-terminal domain Xdur_005325 PF17941 Polyphosphate kinase C-terminal domain 1 Xdur_005325 PF13090 Polyphosphate kinase C-terminal domain 2 Xdur_005330 PF00512 His Kinase A (phospho-acceptor) domain Xdur_005330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_005330 PF11808 Phosphate regulon sensor protein PhoR Xdur_005330 PF00989 PAS fold Xdur_005335 PF00072 Response regulator receiver domain Xdur_005335 PF00486 Transcriptional regulatory protein, C terminal Xdur_005340 PF13181 Tetratricopeptide repeat Xdur_005340 PF01435 Peptidase family M48 Xdur_005345 PF00462 Glutaredoxin Xdur_005355 PF00180 Isocitrate/isopropylmalate dehydrogenase Xdur_005500 PF13276 HTH-like domain Xdur_005500 PF00665 Integrase core domain Xdur_005500 PF13333 Integrase core domain Xdur_005525 PF05698 Bacterial trigger factor protein (TF) C-terminus Xdur_005525 PF05697 Bacterial trigger factor protein (TF) Xdur_005530 PF00574 Clp protease Xdur_005535 PF07724 AAA domain (Cdc48 subfamily) Xdur_005535 PF10431 C-terminal, D2-small domain, of ClpB protein Xdur_005535 PF06689 ClpX C4-type zinc finger Xdur_005540 PF05362 Lon protease (S16) C-terminal proteolytic domain Xdur_005540 PF02190 ATP-dependent protease La (LON) substrate-binding domain Xdur_005540 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_005545 PF00216 Bacterial DNA-binding protein Xdur_005570 PF05257 CHAP domain Xdur_005570 PF01476 LysM domain Xdur_005575 PF16123 Hydroxyacylglutathione hydrolase C-terminus Xdur_005575 PF00753 Metallo-beta-lactamase superfamily Xdur_005585 PF00075 RNase H Xdur_005590 PF00929 Exonuclease Xdur_005610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Xdur_005620 PF00753 Metallo-beta-lactamase superfamily Xdur_005620 PF12706 Beta-lactamase superfamily domain Xdur_005625 PF06463 Molybdenum Cofactor Synthesis C Xdur_005625 PF04055 Radical SAM superfamily Xdur_005635 PF01967 MoaC family Xdur_005640 PF02597 ThiS family Xdur_005645 PF02391 MoaE protein Xdur_005730 PF04002 RadC-like JAB domain Xdur_005750 PF01555 DNA methylase Xdur_005810 PF12462 DNA helicase IV / RNA helicase N terminal Xdur_005810 PF00580 UvrD/REP helicase N-terminal domain Xdur_005810 PF13361 UvrD-like helicase C-terminal domain Xdur_005850 PF12170 DNA polymerase III tau subunit V interacting with alpha Xdur_005850 PF12169 DNA polymerase III subunits gamma and tau domain III Xdur_005850 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Xdur_005855 PF02575 YbaB/EbfC DNA-binding family Xdur_005860 PF13662 Toprim domain Xdur_005860 PF02132 RecR protein Xdur_005865 PF01230 HIT domain Xdur_005875 PF13559 Domain of unknown function (DUF4129) Xdur_005875 PF11992 Domain of unknown function (DUF3488) Xdur_005875 PF01841 Transglutaminase-like superfamily Xdur_005885 PF17863 AAA lid domain Xdur_005885 PF07726 ATPase family associated with various cellular activities (AAA) Xdur_005905 PF02545 Maf-like protein Xdur_005910 PF02620 Large ribosomal RNA subunit accumulation protein YceD Xdur_005915 PF01783 Ribosomal L32p protein family Xdur_005920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Xdur_005920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Xdur_005930 PF00698 Acyl transferase domain Xdur_005940 PF00550 Phosphopantetheine attachment site Xdur_005945 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_005945 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_005950 PF04715 Anthranilate synthase component I, N terminal region Xdur_005950 PF00425 chorismate binding enzyme Xdur_005955 PF02618 YceG-like family Xdur_005960 PF09115 DNA polymerase III, delta subunit, C terminal Xdur_005980 PF02954 Bacterial regulatory protein, Fis family Xdur_005980 PF06506 Propionate catabolism activator Xdur_005980 PF00158 Sigma-54 interaction domain Xdur_005990 PF00285 Citrate synthase, C-terminal domain Xdur_005995 PF00694 Aconitase C-terminal domain Xdur_005995 PF00330 Aconitase family (aconitate hydratase) Xdur_006000 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Xdur_006015 PF04303 PrpF protein Xdur_006020 PF07715 TonB-dependent Receptor Plug Domain Xdur_006020 PF00593 TonB dependent receptor Xdur_006030 PF17962 Bacterial macroglobulin domain 6 Xdur_006030 PF00207 Alpha-2-macroglobulin family Xdur_006030 PF07703 Alpha-2-macroglobulin bait region domain Xdur_006030 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain Xdur_006030 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Xdur_006030 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Xdur_006030 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Xdur_006030 PF01835 MG2 domain Xdur_006045 PF06832 Penicillin-Binding Protein C-terminus Family Xdur_006045 PF00905 Penicillin binding protein transpeptidase domain Xdur_006045 PF00912 Transglycosylase Xdur_006065 PF08534 Redoxin Xdur_006075 PF01556 DnaJ C terminal domain Xdur_006075 PF00226 DnaJ domain Xdur_006080 PF00072 Response regulator receiver domain Xdur_006085 PF01145 SPFH domain / Band 7 family Xdur_006085 PF12221 Bacterial membrane protein N terminal Xdur_006090 PF01145 SPFH domain / Band 7 family Xdur_006100 PF00709 Adenylosuccinate synthetase Xdur_006105 PF01433 Peptidase family M1 domain Xdur_006105 PF11838 ERAP1-like C-terminal domain Xdur_006115 PF00440 Bacterial regulatory proteins, tetR family Xdur_006160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Xdur_006160 PF18766 SWI2/SNF2 ATPase Xdur_006160 PF11867 Domain of unknown function (DUF3387) Xdur_006185 PF00300 Histidine phosphatase superfamily (branch 1) Xdur_006185 PF13456 Reverse transcriptase-like Xdur_006190 PF01256 Carbohydrate kinase Xdur_006200 PF00723 Glycosyl hydrolases family 15 Xdur_006210 PF07971 Glycosyl hydrolase family 92 Xdur_006210 PF17678 Glycosyl hydrolase family 92 N-terminal domain Xdur_006230 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_006250 PF17755 UvrA DNA-binding domain Xdur_006260 PF00941 FAD binding domain in molybdopterin dehydrogenase Xdur_006260 PF03450 CO dehydrogenase flavoprotein C-terminal domain Xdur_006265 PF01799 [2Fe-2S] binding domain Xdur_006265 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_006300 PF01726 LexA DNA binding domain Xdur_006300 PF00717 Peptidase S24-like Xdur_006315 PF02811 PHP domain Xdur_006315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Xdur_006315 PF07733 Bacterial DNA polymerase III alpha NTPase domain Xdur_006315 PF14579 Helix-hairpin-helix motif Xdur_006325 PF00326 Prolyl oligopeptidase family Xdur_006335 PF03169 OPT oligopeptide transporter protein Xdur_006350 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Xdur_006350 PF07676 WD40-like Beta Propeller Repeat Xdur_006350 PF00326 Prolyl oligopeptidase family Xdur_006365 PF02311 AraC-like ligand binding domain Xdur_006365 PF12833 Helix-turn-helix domain Xdur_006380 PF00199 Catalase Xdur_006380 PF06628 Catalase-related immune-responsive Xdur_006380 PF18011 C-terminal domain found in long catalases Xdur_006385 PF00248 Aldo/keto reductase family Xdur_006390 PF00135 Carboxylesterase family Xdur_006395 PF02347 Glycine cleavage system P-protein Xdur_006400 PF07690 Major Facilitator Superfamily Xdur_006415 PF08019 Phosphoethanolamine transferase EptA/EptB Xdur_006415 PF00884 Sulfatase Xdur_006430 PF00072 Response regulator receiver domain Xdur_006430 PF00486 Transcriptional regulatory protein, C terminal Xdur_006435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006435 PF08521 Two-component sensor kinase N-terminal Xdur_006435 PF00512 His Kinase A (phospho-acceptor) domain Xdur_006445 PF03776 Septum formation topological specificity factor MinE Xdur_006450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Xdur_006455 PF03775 Septum formation inhibitor MinC, C-terminal domain Xdur_006455 PF05209 Septum formation inhibitor MinC, N-terminal domain Xdur_006465 PF07730 Histidine kinase Xdur_006470 PF00072 Response regulator receiver domain Xdur_006470 PF00196 Bacterial regulatory proteins, luxR family Xdur_006485 PF00730 HhH-GPD superfamily base excision DNA repair protein Xdur_006510 PF02222 ATP-grasp domain Xdur_006520 PF04376 Arginine-tRNA-protein transferase, N terminus Xdur_006520 PF04377 Arginine-tRNA-protein transferase, C terminus Xdur_006545 PF00378 Enoyl-CoA hydratase/isomerase Xdur_006560 PF17760 UvrA interaction domain Xdur_006560 PF17755 UvrA DNA-binding domain Xdur_006560 PF00005 ABC transporter Xdur_006565 PF00829 Ribosomal prokaryotic L21 protein Xdur_006570 PF01016 Ribosomal L27 protein Xdur_006575 PF01018 GTP1/OBG Xdur_006575 PF01926 50S ribosome-binding GTPase Xdur_006580 PF01649 Ribosomal protein S20 Xdur_006585 PF03023 Lipid II flippase MurJ Xdur_006590 PF06574 FAD synthetase Xdur_006590 PF01687 Riboflavin kinase Xdur_006595 PF00133 tRNA synthetases class I (I, L, M and V) Xdur_006595 PF08264 Anticodon-binding domain of tRNA Xdur_006595 PF06827 Zinc finger found in FPG and IleRS Xdur_006600 PF01252 Signal peptidase (SPase) II Xdur_006605 PF02401 LytB protein Xdur_006615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Xdur_006615 PF06481 COX Aromatic Rich Motif Xdur_006620 PF00115 Cytochrome C and Quinol oxidase polypeptide I Xdur_006625 PF00510 Cytochrome c oxidase subunit III Xdur_006630 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Xdur_006640 PF18073 Rubredoxin metal binding domain Xdur_006645 PF05656 Protein of unknown function (DUF805) Xdur_006655 PF12833 Helix-turn-helix domain Xdur_006660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006660 PF00183 Hsp90 protein Xdur_006670 PF08678 Rsbr N terminal Xdur_006670 PF01740 STAS domain Xdur_006675 PF01740 STAS domain Xdur_006680 PF13581 Histidine kinase-like ATPase domain Xdur_006690 PF00512 His Kinase A (phospho-acceptor) domain Xdur_006690 PF00072 Response regulator receiver domain Xdur_006690 PF17149 Periplasmic sensor domain found in signal transduction proteins Xdur_006690 PF00672 HAMP domain Xdur_006690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006690 PF01627 Hpt domain Xdur_006695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006695 PF00512 His Kinase A (phospho-acceptor) domain Xdur_006695 PF00072 Response regulator receiver domain Xdur_006695 PF13188 PAS domain Xdur_006695 PF08448 PAS fold Xdur_006700 PF04616 Glycosyl hydrolases family 43 Xdur_006700 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain Xdur_006705 PF00593 TonB dependent receptor Xdur_006705 PF07715 TonB-dependent Receptor Plug Domain Xdur_006710 PF00085 Thioredoxin Xdur_006715 PF07237 Protein of unknown function (DUF1428) Xdur_006720 PF02702 Osmosensitive K+ channel His kinase sensor domain Xdur_006720 PF00512 His Kinase A (phospho-acceptor) domain Xdur_006720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006720 PF13492 GAF domain Xdur_006720 PF13493 Domain of unknown function (DUF4118) Xdur_006725 PF01339 CheB methylesterase Xdur_006730 PF03705 CheR methyltransferase, all-alpha domain Xdur_006730 PF01739 CheR methyltransferase, SAM binding domain Xdur_006735 PF00672 HAMP domain Xdur_006735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006735 PF00512 His Kinase A (phospho-acceptor) domain Xdur_006735 PF01627 Hpt domain Xdur_006735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Xdur_006735 PF00072 Response regulator receiver domain Xdur_006740 PF00072 Response regulator receiver domain Xdur_006740 PF13426 PAS domain Xdur_006740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_006745 PF00072 Response regulator receiver domain Xdur_006750 PF00722 Glycosyl hydrolases family 16 Xdur_006760 PF06964 Alpha-L-arabinofuranosidase C-terminal domain Xdur_006765 PF01263 Aldose 1-epimerase Xdur_006770 PF01578 Cytochrome C assembly protein Xdur_006775 PF02978 Signal peptide binding domain Xdur_006775 PF00448 SRP54-type protein, GTPase domain Xdur_006775 PF02881 SRP54-type protein, helical bundle domain Xdur_006780 PF03060 Nitronate monooxygenase Xdur_006785 PF01063 Amino-transferase class IV Xdur_006790 PF00886 Ribosomal protein S16 Xdur_006795 PF01782 RimM N-terminal domain Xdur_006795 PF05239 PRC-barrel domain Xdur_006800 PF01746 tRNA (Guanine-1)-methyltransferase Xdur_006805 PF01245 Ribosomal protein L19 Xdur_006810 PF01554 MatE Xdur_006825 PF01479 S4 domain Xdur_006830 PF00141 Peroxidase Xdur_006840 PF01624 MutS domain I Xdur_006840 PF05192 MutS domain III Xdur_006840 PF05190 MutS family domain IV Xdur_006840 PF00488 MutS domain V Xdur_006840 PF05188 MutS domain II Xdur_006850 PF03527 RHS protein Xdur_006850 PF05593 RHS Repeat Xdur_006875 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Xdur_006875 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Xdur_006875 PF16355 Domain of unknown function (DUF4982) Xdur_006875 PF00703 Glycosyl hydrolases family 2 Xdur_006875 PF02837 Glycosyl hydrolases family 2, sugar binding domain Xdur_006880 PF07745 Glycosyl hydrolase family 53 Xdur_006890 PF06114 IrrE N-terminal-like domain Xdur_006890 PF01381 Helix-turn-helix Xdur_006890 PF09856 Predicted transcriptional regulator (DUF2083) Xdur_006895 PF00171 Aldehyde dehydrogenase family Xdur_006900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_006900 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_006900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_006905 PF00378 Enoyl-CoA hydratase/isomerase Xdur_006910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Xdur_006910 PF00378 Enoyl-CoA hydratase/isomerase Xdur_006910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Xdur_006915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Xdur_006915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Xdur_006920 PF01545 Cation efflux family Xdur_006925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Xdur_006925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Xdur_006925 PF00378 Enoyl-CoA hydratase/isomerase Xdur_006930 PF04542 Sigma-70 region 2 Xdur_006930 PF08281 Sigma-70, region 4 Xdur_006940 PF13180 PDZ domain Xdur_006945 PF06421 GTP-binding protein LepA C-terminus Xdur_006945 PF00679 Elongation factor G C-terminus Xdur_006945 PF00009 Elongation factor Tu GTP binding domain Xdur_006945 PF03144 Elongation factor Tu domain 2 Xdur_006950 PF10502 Signal peptidase, peptidase S26 Xdur_006960 PF00035 Double-stranded RNA binding motif Xdur_006960 PF14622 Ribonuclease-III-like Xdur_006965 PF07650 KH domain Xdur_006965 PF01926 50S ribosome-binding GTPase Xdur_006970 PF02565 Recombination protein O C terminal Xdur_006970 PF11967 Recombination protein O N terminal Xdur_006980 PF05958 tRNA (Uracil-5-)-methyltransferase Xdur_006985 PF01928 CYTH domain Xdur_006990 PF01323 DSBA-like thioredoxin domain Xdur_006995 PF01593 Flavin containing amine oxidoreductase Xdur_007000 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Xdur_007005 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_007010 PF00156 Phosphoribosyl transferase domain Xdur_007015 PF01048 Phosphorylase superfamily Xdur_007020 PF00313 'Cold-shock' DNA-binding domain Xdur_007025 PF01494 FAD binding domain Xdur_007035 PF00271 Helicase conserved C-terminal domain Xdur_007035 PF08494 DEAD/H associated Xdur_007035 PF00270 DEAD/DEAH box helicase Xdur_007040 PF04679 ATP dependent DNA ligase C terminal region Xdur_007040 PF01068 ATP dependent DNA ligase domain Xdur_007040 PF04675 DNA ligase N terminus Xdur_007050 PF04679 ATP dependent DNA ligase C terminal region Xdur_007050 PF01068 ATP dependent DNA ligase domain Xdur_007050 PF04675 DNA ligase N terminus Xdur_007065 PF00072 Response regulator receiver domain Xdur_007065 PF00990 Diguanylate cyclase, GGDEF domain Xdur_007080 PF02803 Thiolase, C-terminal domain Xdur_007080 PF00108 Thiolase, N-terminal domain Xdur_007085 PF00082 Subtilase family Xdur_007085 PF03797 Autotransporter beta-domain Xdur_007085 PF12951 Passenger-associated-transport-repeat Xdur_007090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Xdur_007090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Xdur_007105 PF01863 Protein of unknown function DUF45 Xdur_007110 PF07043 Protein of unknown function (DUF1328) Xdur_007120 PF01258 Prokaryotic dksA/traR C4-type zinc finger Xdur_007140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Xdur_007150 PF03831 PhnA domain Xdur_007150 PF08274 PhnA Zinc-Ribbon Xdur_007155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Xdur_007160 PF07690 Major Facilitator Superfamily Xdur_007195 PF09924 Uncharacterised conserved protein (DUF2156) Xdur_007195 PF03706 Lysylphosphatidylglycerol synthase TM region Xdur_007205 PF01042 Endoribonuclease L-PSP Xdur_007250 PF04545 Sigma-70, region 4 Xdur_007250 PF04542 Sigma-70 region 2 Xdur_007265 PF04060 Putative Fe-S cluster Xdur_007275 PF01588 Putative tRNA binding domain Xdur_007275 PF09334 tRNA synthetases class I (M) Xdur_007290 PF13732 Domain of unknown function (DUF4162) Xdur_007290 PF00005 ABC transporter Xdur_007295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Xdur_007300 PF00324 Amino acid permease Xdur_007305 PF02574 Homocysteine S-methyltransferase Xdur_007315 PF02592 Putative vitamin uptake transporter Xdur_007335 PF03551 Transcriptional regulator PadR-like family Xdur_007355 PF03653 Uncharacterised protein family (UPF0093) Xdur_007370 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Xdur_007375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Xdur_007375 PF01336 OB-fold nucleic acid binding domain Xdur_007375 PF07733 Bacterial DNA polymerase III alpha NTPase domain Xdur_007375 PF02811 PHP domain Xdur_007375 PF14579 Helix-hairpin-helix motif Xdur_007380 PF01351 Ribonuclease HII Xdur_007385 PF02684 Lipid-A-disaccharide synthetase Xdur_007390 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_007390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Xdur_007395 PF07977 FabA-like domain Xdur_007400 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_007400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Xdur_007410 PF01103 Surface antigen Xdur_007410 PF07244 Surface antigen variable number repeat Xdur_007415 PF17820 PDZ domain Xdur_007415 PF02163 Peptidase family M50 Xdur_007420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Xdur_007420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Xdur_007420 PF13288 DXP reductoisomerase C-terminal domain Xdur_007430 PF01255 Putative undecaprenyl diphosphate synthase Xdur_007435 PF01765 Ribosome recycling factor Xdur_007440 PF00696 Amino acid kinase family Xdur_007445 PF00990 Diguanylate cyclase, GGDEF domain Xdur_007445 PF00072 Response regulator receiver domain Xdur_007450 PF00889 Elongation factor TS Xdur_007455 PF00318 Ribosomal protein S2 Xdur_007490 PF00557 Metallopeptidase family M24 Xdur_007495 PF08335 GlnD PII-uridylyltransferase Xdur_007495 PF01966 HD domain Xdur_007495 PF01909 Nucleotidyltransferase domain Xdur_007500 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_007500 PF14602 Hexapeptide repeat of succinyl-transferase Xdur_007500 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Xdur_007505 PF03960 ArsC family Xdur_007510 PF07687 Peptidase dimerisation domain Xdur_007510 PF01546 Peptidase family M20/M25/M40 Xdur_007515 PF00733 Asparagine synthase Xdur_007515 PF13537 Glutamine amidotransferase domain Xdur_007530 PF01804 Penicillin amidase Xdur_007535 PF00210 Ferritin-like domain Xdur_007540 PF05724 Thiopurine S-methyltransferase (TPMT) Xdur_007550 PF00521 DNA gyrase/topoisomerase IV, subunit A Xdur_007550 PF03989 DNA gyrase C-terminal domain, beta-propeller Xdur_007565 PF02321 Outer membrane efflux protein Xdur_007570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_007570 PF00529 HlyD membrane-fusion protein of T1SS Xdur_007575 PF07690 Major Facilitator Superfamily Xdur_007585 PF14310 Fibronectin type III-like domain Xdur_007585 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_007585 PF01915 Glycosyl hydrolase family 3 C-terminal domain Xdur_007595 PF00854 POT family Xdur_007620 PF12802 MarR family Xdur_007625 PF01432 Peptidase family M3 Xdur_007630 PF00255 Glutathione peroxidase Xdur_007635 PF00970 Oxidoreductase FAD-binding domain Xdur_007635 PF00175 Oxidoreductase NAD-binding domain Xdur_007640 PF00005 ABC transporter Xdur_007645 PF05681 Fumarate hydratase (Fumerase) Xdur_007645 PF05683 Fumarase C-terminus Xdur_007655 PF00484 Carbonic anhydrase Xdur_007660 PF02253 Phospholipase A1 Xdur_007670 PF00313 'Cold-shock' DNA-binding domain Xdur_007685 PF00899 ThiF family Xdur_007690 PF01026 TatD related DNase Xdur_007705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_007705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_007705 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_007715 PF00043 Glutathione S-transferase, C-terminal domain Xdur_007715 PF02798 Glutathione S-transferase, N-terminal domain Xdur_007720 PF00733 Asparagine synthase Xdur_007720 PF13537 Glutamine amidotransferase domain Xdur_007725 PF03358 NADPH-dependent FMN reductase Xdur_007730 PF00772 DnaB-like helicase N terminal domain Xdur_007730 PF03796 DnaB-like helicase C terminal domain Xdur_007735 PF03441 FAD binding domain of DNA photolyase Xdur_007735 PF00875 DNA photolyase Xdur_007740 PF00691 OmpA family Xdur_007740 PF05736 OprF membrane domain Xdur_007745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_007745 PF03466 LysR substrate binding domain Xdur_007760 PF00529 HlyD membrane-fusion protein of T1SS Xdur_007760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_007765 PF00873 AcrB/AcrD/AcrF family Xdur_007770 PF00106 short chain dehydrogenase Xdur_007775 PF02321 Outer membrane efflux protein Xdur_007780 PF00990 Diguanylate cyclase, GGDEF domain Xdur_007790 PF00990 Diguanylate cyclase, GGDEF domain Xdur_007810 PF00082 Subtilase family Xdur_007815 PF01668 SmpB protein Xdur_007820 PF03364 Polyketide cyclase / dehydrase and lipid transport Xdur_007825 PF03658 RnfH family Ubiquitin Xdur_007830 PF04355 SmpA / OmlA family Xdur_007835 PF01475 Ferric uptake regulator family Xdur_007840 PF02463 RecF/RecN/SMC N terminal domain Xdur_007845 PF01628 HrcA protein C terminal domain Xdur_007845 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Xdur_007850 PF01025 GrpE Xdur_007855 PF00012 Hsp70 protein Xdur_007860 PF00226 DnaJ domain Xdur_007860 PF01556 DnaJ C terminal domain Xdur_007860 PF00684 DnaJ central domain Xdur_007870 PF08543 Phosphomethylpyrimidine kinase Xdur_007895 PF03412 Peptidase C39 family Xdur_007895 PF00005 ABC transporter Xdur_007895 PF00664 ABC transporter transmembrane region Xdur_007900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_007900 PF03466 LysR substrate binding domain Xdur_007905 PF00664 ABC transporter transmembrane region Xdur_007905 PF00005 ABC transporter Xdur_007910 PF01205 Uncharacterized protein family UPF0029 Xdur_007915 PF03641 Possible lysine decarboxylase Xdur_007920 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_007920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Xdur_007925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Xdur_007925 PF00364 Biotin-requiring enzyme Xdur_007925 PF02817 e3 binding domain Xdur_007930 PF16078 2-oxoglutarate dehydrogenase N-terminus Xdur_007930 PF00676 Dehydrogenase E1 component Xdur_007930 PF02779 Transketolase, pyrimidine binding domain Xdur_007930 PF16870 2-oxoglutarate dehydrogenase C-terminal Xdur_007940 PF08007 Cupin superfamily protein Xdur_007950 PF08328 Adenylosuccinate lyase C-terminal Xdur_007950 PF00206 Lyase Xdur_007960 PF00571 CBS domain Xdur_007960 PF03471 Transporter associated domain Xdur_007960 PF01595 Cyclin M transmembrane N-terminal domain Xdur_007965 PF10415 Fumarase C C-terminus Xdur_007965 PF00206 Lyase Xdur_007990 PF00005 ABC transporter Xdur_007995 PF00392 Bacterial regulatory proteins, gntR family Xdur_008005 PF00255 Glutathione peroxidase Xdur_008010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Xdur_008010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Xdur_008015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Xdur_008015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Xdur_008015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Xdur_008020 PF04102 SlyX Xdur_008035 PF00356 Bacterial regulatory proteins, lacI family Xdur_008040 PF07690 Major Facilitator Superfamily Xdur_008045 PF00294 pfkB family carbohydrate kinase Xdur_008055 PF02310 B12 binding domain Xdur_008055 PF02607 B12 binding domain Xdur_008055 PF02965 Vitamin B12 dependent methionine synthase, activation domain Xdur_008055 PF00809 Pterin binding enzyme Xdur_008055 PF02574 Homocysteine S-methyltransferase Xdur_008060 PF00809 Pterin binding enzyme Xdur_008060 PF02574 Homocysteine S-methyltransferase Xdur_008065 PF01209 ubiE/COQ5 methyltransferase family Xdur_008070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_008070 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_008070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_008075 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_008075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_008075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_008080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_008080 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_008080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_008085 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_008085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_008085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_008100 PF17876 Cold shock domain Xdur_008100 PF08461 Ribonuclease R winged-helix domain Xdur_008100 PF00575 S1 RNA binding domain Xdur_008100 PF00773 RNB domain Xdur_008100 PF08206 Ribonuclease B OB domain Xdur_008110 PF00588 SpoU rRNA Methylase family Xdur_008110 PF08032 RNA 2'-O ribose methyltransferase substrate binding Xdur_008115 PF00990 Diguanylate cyclase, GGDEF domain Xdur_008120 PF00929 Exonuclease Xdur_008130 PF01895 PhoU domain Xdur_008135 PF00005 ABC transporter Xdur_008140 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_008145 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_008150 PF12849 PBP superfamily domain Xdur_008155 PF12849 PBP superfamily domain Xdur_008170 PF00484 Carbonic anhydrase Xdur_008175 PF01740 STAS domain Xdur_008175 PF00916 Sulfate permease family Xdur_008180 PF10576 Iron-sulfur binding domain of endonuclease III Xdur_008180 PF00730 HhH-GPD superfamily base excision DNA repair protein Xdur_008180 PF00633 Helix-hairpin-helix motif Xdur_008190 PF00378 Enoyl-CoA hydratase/isomerase Xdur_008195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Xdur_008195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Xdur_008200 PF00293 NUDIX domain Xdur_008205 PF00581 Rhodanese-like domain Xdur_008235 PF12848 ABC transporter Xdur_008235 PF16326 ABC transporter C-terminal domain Xdur_008235 PF00005 ABC transporter Xdur_008245 PF10672 S-adenosylmethionine-dependent methyltransferase Xdur_008245 PF02926 THUMP domain Xdur_008245 PF01170 Putative RNA methylase family UPF0020 Xdur_008250 PF01513 ATP-NAD kinase Xdur_008275 PF00929 Exonuclease Xdur_008275 PF08411 Exonuclease C-terminal Xdur_008285 PF01494 FAD binding domain Xdur_008290 PF00266 Aminotransferase class-V Xdur_008300 PF06052 3-hydroxyanthranilic acid dioxygenase Xdur_008305 PF00484 Carbonic anhydrase Xdur_008380 PF04299 Putative FMN-binding domain Xdur_008400 PF01336 OB-fold nucleic acid binding domain Xdur_008400 PF00152 tRNA synthetases class II (D, K and N) Xdur_008405 PF01521 Iron-sulphur cluster biosynthesis Xdur_008410 PF01250 Ribosomal protein S6 Xdur_008415 PF01084 Ribosomal protein S18 Xdur_008420 PF01281 Ribosomal protein L9, N-terminal domain Xdur_008420 PF03948 Ribosomal protein L9, C-terminal domain Xdur_008425 PF02463 RecF/RecN/SMC N terminal domain Xdur_008430 PF04354 ZipA, C-terminal FtsZ-binding domain Xdur_008440 PF00155 Aminotransferase class I and II Xdur_008445 PF12826 Helix-hairpin-helix motif Xdur_008445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Xdur_008445 PF03120 NAD-dependent DNA ligase OB-fold domain Xdur_008445 PF01653 NAD-dependent DNA ligase adenylation domain Xdur_008445 PF00533 BRCA1 C Terminus (BRCT) domain Xdur_008450 PF00152 tRNA synthetases class II (D, K and N) Xdur_008465 PF01008 Initiation factor 2 subunit family Xdur_008470 PF00521 DNA gyrase/topoisomerase IV, subunit A Xdur_008470 PF03989 DNA gyrase C-terminal domain, beta-propeller Xdur_008475 PF13360 PQQ-like domain Xdur_008485 PF17392 Urocanase C-terminal domain Xdur_008485 PF01175 Urocanase Rossmann-like domain Xdur_008485 PF17391 Urocanase N-terminal domain Xdur_008495 PF00221 Aromatic amino acid lyase Xdur_008500 PF07969 Amidohydrolase family Xdur_008515 PF00392 Bacterial regulatory proteins, gntR family Xdur_008515 PF07702 UTRA domain Xdur_008545 PF01794 Ferric reductase like transmembrane component Xdur_008550 PF00174 Oxidoreductase molybdopterin binding domain Xdur_008555 PF00266 Aminotransferase class-V Xdur_008560 PF01842 ACT domain Xdur_008560 PF00800 Prephenate dehydratase Xdur_008560 PF01817 Chorismate mutase type II Xdur_008565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Xdur_008575 PF03544 Gram-negative bacterial TonB protein C-terminal Xdur_008580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Xdur_008580 PF02403 Seryl-tRNA synthetase N-terminal domain Xdur_008585 PF02525 Flavodoxin-like fold Xdur_008590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_008590 PF03466 LysR substrate binding domain Xdur_008655 PF00672 HAMP domain Xdur_008655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_008655 PF02203 Tar ligand binding domain homologue Xdur_008660 PF01494 FAD binding domain Xdur_008670 PF00072 Response regulator receiver domain Xdur_008670 PF13188 PAS domain Xdur_008670 PF08448 PAS fold Xdur_008670 PF00512 His Kinase A (phospho-acceptor) domain Xdur_008670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_008675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Xdur_008675 PF00072 Response regulator receiver domain Xdur_008675 PF01627 Hpt domain Xdur_008675 PF00512 His Kinase A (phospho-acceptor) domain Xdur_008675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_008675 PF00672 HAMP domain Xdur_008680 PF06745 KaiC Xdur_008685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_008685 PF13426 PAS domain Xdur_008685 PF00072 Response regulator receiver domain Xdur_008695 PF03918 Cytochrome C biogenesis protein Xdur_008700 PF08534 Redoxin Xdur_008705 PF01578 Cytochrome C assembly protein Xdur_008705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Xdur_008710 PF03100 CcmE Xdur_008720 PF01578 Cytochrome C assembly protein Xdur_008725 PF00082 Subtilase family Xdur_008735 PF04542 Sigma-70 region 2 Xdur_008735 PF08281 Sigma-70, region 4 Xdur_008745 PF00034 Cytochrome c Xdur_008760 PF05523 WxcM-like, C-terminal Xdur_008780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Xdur_008785 PF01943 Polysaccharide biosynthesis protein Xdur_008790 PF00535 Glycosyl transferase family 2 Xdur_008805 PF08241 Methyltransferase domain Xdur_008825 PF13579 Glycosyl transferase 4-like domain Xdur_008825 PF00534 Glycosyl transferases group 1 Xdur_008840 PF00005 ABC transporter Xdur_008845 PF00664 ABC transporter transmembrane region Xdur_008845 PF00005 ABC transporter Xdur_008850 PF07690 Major Facilitator Superfamily Xdur_008855 PF00296 Luciferase-like monooxygenase Xdur_008870 PF00571 CBS domain Xdur_008870 PF03471 Transporter associated domain Xdur_008870 PF01595 Cyclin M transmembrane N-terminal domain Xdur_008880 PF01384 Phosphate transporter family Xdur_008895 PF00204 DNA gyrase B Xdur_008895 PF00986 DNA gyrase B subunit, carboxyl terminus Xdur_008895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_008895 PF01751 Toprim domain Xdur_008905 PF06418 CTP synthase N-terminus Xdur_008905 PF00117 Glutamine amidotransferase class-I Xdur_008910 PF00793 DAHP synthetase I family Xdur_008920 PF00113 Enolase, C-terminal TIM barrel domain Xdur_008920 PF03952 Enolase, N-terminal domain Xdur_008925 PF04977 Septum formation initiator Xdur_008930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Xdur_008935 PF02542 YgbB family Xdur_008940 PF01142 tRNA pseudouridine synthase D (TruD) Xdur_008945 PF01713 Smr domain Xdur_008950 PF01975 Survival protein SurE Xdur_008960 PF09335 SNARE associated Golgi protein Xdur_008965 PF01476 LysM domain Xdur_008965 PF01551 Peptidase family M23 Xdur_008970 PF04430 Protein of unknown function (DUF498/DUF598) Xdur_008975 PF01985 CRS1 / YhbY (CRM) domain Xdur_008980 PF01728 FtsJ-like methyltransferase Xdur_008985 PF01434 Peptidase family M41 Xdur_008985 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_008985 PF06480 FtsH Extracellular Xdur_008985 PF17862 AAA+ lid domain Xdur_008990 PF00809 Pterin binding enzyme Xdur_009000 PF17209 Hfq protein Xdur_009005 PF16360 GTP-binding GTPase Middle Region Xdur_009005 PF13167 GTP-binding GTPase N-terminal Xdur_009005 PF01926 50S ribosome-binding GTPase Xdur_009010 PF02464 Competence-damaged protein Xdur_009015 PF03109 ABC1 family Xdur_009020 PF00717 Peptidase S24-like Xdur_009020 PF01726 LexA DNA binding domain Xdur_009025 PF00154 recA bacterial DNA recombination protein Xdur_009030 PF02631 RecX family Xdur_009035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Xdur_009035 PF01411 tRNA synthetases class II (A) Xdur_009035 PF02272 DHHA1 domain Xdur_009040 PF02599 Global regulator protein family Xdur_009050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009050 PF08447 PAS fold Xdur_009050 PF13426 PAS domain Xdur_009055 PF17954 Quercetinase C-terminal cupin domain Xdur_009055 PF02678 Pirin Xdur_009060 PF03466 LysR substrate binding domain Xdur_009060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_009085 PF02581 Thiamine monophosphate synthase Xdur_009085 PF08543 Phosphomethylpyrimidine kinase Xdur_009100 PF13638 PIN domain Xdur_009100 PF02562 PhoH-like protein Xdur_009105 PF00578 AhpC/TSA family Xdur_009120 PF00701 Dihydrodipicolinate synthetase family Xdur_009130 PF00037 4Fe-4S binding domain Xdur_009130 PF11953 Domain of unknown function (DUF3470) Xdur_009135 PF05035 2-keto-3-deoxy-galactonokinase Xdur_009140 PF08450 SMP-30/Gluconolactonase/LRE-like region Xdur_009145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Xdur_009145 PF13378 Enolase C-terminal domain-like Xdur_009150 PF01081 KDPG and KHG aldolase Xdur_009155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_009155 PF03466 LysR substrate binding domain Xdur_009170 PF00942 Cellulose binding domain Xdur_009170 PF03442 Carbohydrate binding domain X2 Xdur_009185 PF16338 Domain of unknown function (DUF4968) Xdur_009185 PF17137 Domain of unknown function (DUF5110) Xdur_009185 PF01055 Glycosyl hydrolases family 31 Xdur_009195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Xdur_009195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Xdur_009205 PF00083 Sugar (and other) transporter Xdur_009225 PF01520 N-acetylmuramoyl-L-alanine amidase Xdur_009230 PF02649 Type I GTP cyclohydrolase folE2 Xdur_009240 PF01743 Poly A polymerase head domain Xdur_009240 PF12626 Polymerase A arginine-rich C-terminus Xdur_009240 PF12627 Probable RNA and SrmB- binding site of polymerase A Xdur_009245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Xdur_009250 PF02548 Ketopantoate hydroxymethyltransferase Xdur_009255 PF02569 Pantoate-beta-alanine ligase Xdur_009260 PF02261 Aspartate decarboxylase Xdur_009265 PF00342 Phosphoglucose isomerase Xdur_009285 PF14310 Fibronectin type III-like domain Xdur_009285 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_009285 PF01915 Glycosyl hydrolase family 3 C-terminal domain Xdur_009290 PF00474 Sodium:solute symporter family Xdur_009295 PF00563 EAL domain Xdur_009295 PF01590 GAF domain Xdur_009295 PF00360 Phytochrome region Xdur_009295 PF00990 Diguanylate cyclase, GGDEF domain Xdur_009305 PF02013 Cellulose or protein binding domain Xdur_009305 PF00150 Cellulase (glycosyl hydrolase family 5) Xdur_009310 PF00072 Response regulator receiver domain Xdur_009320 PF04551 GcpE protein Xdur_009325 PF01569 PAP2 superfamily Xdur_009335 PF07690 Major Facilitator Superfamily Xdur_009340 PF01177 Asp/Glu/Hydantoin racemase Xdur_009345 PF00892 EamA-like transporter family Xdur_009350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Xdur_009350 PF01565 FAD binding domain Xdur_009355 PF01180 Dihydroorotate dehydrogenase Xdur_009370 PF00171 Aldehyde dehydrogenase family Xdur_009385 PF00535 Glycosyl transferase family 2 Xdur_009390 PF14883 Hypothetical glycosyl hydrolase family 13 Xdur_009390 PF01522 Polysaccharide deacetylase Xdur_009400 PF17287 POTRA domain Xdur_009400 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Xdur_009400 PF08479 POTRA domain, ShlB-type Xdur_009440 PF05594 Haemagluttinin repeat Xdur_009440 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain Xdur_009440 PF13018 Extended Signal Peptide of Type V secretion system Xdur_009440 PF05860 haemagglutination activity domain Xdur_009440 PF13332 Hemagglutinin repeat Xdur_009450 PF03447 Homoserine dehydrogenase, NAD binding domain Xdur_009450 PF00742 Homoserine dehydrogenase Xdur_009450 PF13840 ACT domain Xdur_009450 PF01842 ACT domain Xdur_009450 PF00696 Amino acid kinase family Xdur_009455 PF00288 GHMP kinases N terminal domain Xdur_009455 PF08544 GHMP kinases C terminal Xdur_009465 PF14821 Threonine synthase N terminus Xdur_009465 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_009475 PF00027 Cyclic nucleotide-binding domain Xdur_009475 PF13545 Crp-like helix-turn-helix domain Xdur_009480 PF13393 Histidyl-tRNA synthetase Xdur_009480 PF03129 Anticodon binding domain Xdur_009490 PF01634 ATP phosphoribosyltransferase Xdur_009490 PF08029 HisG, C-terminal domain Xdur_009495 PF00815 Histidinol dehydrogenase Xdur_009500 PF00155 Aminotransferase class I and II Xdur_009505 PF00475 Imidazoleglycerol-phosphate dehydratase Xdur_009510 PF00117 Glutamine amidotransferase class-I Xdur_009515 PF00977 Histidine biosynthesis protein Xdur_009520 PF00977 Histidine biosynthesis protein Xdur_009525 PF01502 Phosphoribosyl-AMP cyclohydrolase Xdur_009525 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Xdur_009545 PF03079 ARD/ARD' family Xdur_009550 PF00596 Class II Aldolase and Adducin N-terminal domain Xdur_009555 PF13520 Amino acid permease Xdur_009560 PF13520 Amino acid permease Xdur_009570 PF01842 ACT domain Xdur_009570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Xdur_009570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Xdur_009575 PF02913 FAD linked oxidases, C-terminal domain Xdur_009575 PF01565 FAD binding domain Xdur_009595 PF09285 Elongation factor P, C-terminal Xdur_009595 PF08207 Elongation factor P (EF-P) KOW-like domain Xdur_009595 PF01132 Elongation factor P (EF-P) OB domain Xdur_009600 PF00106 short chain dehydrogenase Xdur_009605 PF00682 HMGL-like Xdur_009615 PF00378 Enoyl-CoA hydratase/isomerase Xdur_009625 PF07664 Ferrous iron transport protein B C terminus Xdur_009625 PF07670 Nucleoside recognition Xdur_009625 PF02421 Ferrous iron transport protein B Xdur_009640 PF00155 Aminotransferase class I and II Xdur_009645 PF03473 MOSC domain Xdur_009645 PF03475 3-alpha domain Xdur_009650 PF05173 Dihydrodipicolinate reductase, C-terminus Xdur_009650 PF01113 Dihydrodipicolinate reductase, N-terminus Xdur_009655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Xdur_009655 PF00117 Glutamine amidotransferase class-I Xdur_009665 PF02142 MGS-like domain Xdur_009665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Xdur_009665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Xdur_009670 PF01272 Transcription elongation factor, GreA/GreB, C-term Xdur_009670 PF03449 Transcription elongation factor, N-terminal Xdur_009680 PF17768 RecJ OB domain Xdur_009680 PF02272 DHHA1 domain Xdur_009680 PF01368 DHH family Xdur_009720 PF04397 LytTr DNA-binding domain Xdur_009720 PF00072 Response regulator receiver domain Xdur_009730 PF00152 tRNA synthetases class II (D, K and N) Xdur_009730 PF01336 OB-fold nucleic acid binding domain Xdur_009735 PF00072 Response regulator receiver domain Xdur_009740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_009740 PF00512 His Kinase A (phospho-acceptor) domain Xdur_009740 PF01627 Hpt domain Xdur_009740 PF00072 Response regulator receiver domain Xdur_009745 PF00378 Enoyl-CoA hydratase/isomerase Xdur_009760 PF00694 Aconitase C-terminal domain Xdur_009760 PF00330 Aconitase family (aconitate hydratase) Xdur_009775 PF06434 Aconitate hydratase 2 N-terminus Xdur_009775 PF11791 Aconitate B N-terminal domain Xdur_009775 PF00330 Aconitase family (aconitate hydratase) Xdur_009780 PF00561 alpha/beta hydrolase fold Xdur_009785 PF00563 EAL domain Xdur_009785 PF00990 Diguanylate cyclase, GGDEF domain Xdur_009785 PF03707 Bacterial signalling protein N terminal repeat Xdur_009790 PF00072 Response regulator receiver domain Xdur_009790 PF01339 CheB methylesterase Xdur_009795 PF03975 CheD chemotactic sensory transduction Xdur_009800 PF01739 CheR methyltransferase, SAM binding domain Xdur_009800 PF03705 CheR methyltransferase, all-alpha domain Xdur_009805 PF00672 HAMP domain Xdur_009805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009805 PF02203 Tar ligand binding domain homologue Xdur_009815 PF01584 CheW-like domain Xdur_009820 PF07317 Flagellar regulator YcgR Xdur_009820 PF07238 PilZ domain Xdur_009825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009825 PF02203 Tar ligand binding domain homologue Xdur_009825 PF00672 HAMP domain Xdur_009830 PF02203 Tar ligand binding domain homologue Xdur_009830 PF00672 HAMP domain Xdur_009830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009835 PF00672 HAMP domain Xdur_009835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009835 PF02203 Tar ligand binding domain homologue Xdur_009840 PF00672 HAMP domain Xdur_009840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009840 PF02203 Tar ligand binding domain homologue Xdur_009845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009845 PF02203 Tar ligand binding domain homologue Xdur_009845 PF00672 HAMP domain Xdur_009850 PF00672 HAMP domain Xdur_009850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009850 PF02203 Tar ligand binding domain homologue Xdur_009855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009855 PF02203 Tar ligand binding domain homologue Xdur_009855 PF00672 HAMP domain Xdur_009860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009860 PF00672 HAMP domain Xdur_009865 PF00672 HAMP domain Xdur_009865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009865 PF02203 Tar ligand binding domain homologue Xdur_009875 PF00672 HAMP domain Xdur_009875 PF02203 Tar ligand binding domain homologue Xdur_009875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009880 PF08269 Cache domain Xdur_009880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009880 PF08269 Cache domain Xdur_009890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_009890 PF02203 Tar ligand binding domain homologue Xdur_009890 PF00672 HAMP domain Xdur_009895 PF01627 Hpt domain Xdur_009895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_009895 PF02895 Signal transducing histidine kinase, homodimeric domain Xdur_009895 PF09078 CheY binding Xdur_009895 PF01584 CheW-like domain Xdur_009900 PF00072 Response regulator receiver domain Xdur_009910 PF01584 CheW-like domain Xdur_009915 PF13614 AAA domain Xdur_009920 PF13677 Membrane MotB of proton-channel complex MotA/MotB Xdur_009920 PF00691 OmpA family Xdur_009925 PF01618 MotA/TolQ/ExbB proton channel family Xdur_009940 PF00069 Protein kinase domain Xdur_009940 PF03793 PASTA domain Xdur_010010 PF13186 Iron-sulfur cluster-binding domain Xdur_010010 PF04055 Radical SAM superfamily Xdur_010020 PF00072 Response regulator receiver domain Xdur_010020 PF01627 Hpt domain Xdur_010020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_010020 PF02895 Signal transducing histidine kinase, homodimeric domain Xdur_010020 PF01584 CheW-like domain Xdur_010025 PF04344 Chemotaxis phosphatase, CheZ Xdur_010030 PF00072 Response regulator receiver domain Xdur_010035 PF04545 Sigma-70, region 4 Xdur_010035 PF04539 Sigma-70 region 3 Xdur_010035 PF04542 Sigma-70 region 2 Xdur_010040 PF10609 NUBPL iron-transfer P-loop NTPase Xdur_010045 PF00448 SRP54-type protein, GTPase domain Xdur_010050 PF00771 FHIPEP family Xdur_010055 PF01312 FlhB HrpN YscU SpaS Family Xdur_010060 PF00563 EAL domain Xdur_010060 PF00990 Diguanylate cyclase, GGDEF domain Xdur_010060 PF03707 Bacterial signalling protein N terminal repeat Xdur_010065 PF00990 Diguanylate cyclase, GGDEF domain Xdur_010075 PF01311 Bacterial export proteins, family 1 Xdur_010080 PF01313 Bacterial export proteins, family 3 Xdur_010085 PF00813 FliP family Xdur_010090 PF04347 Flagellar biosynthesis protein, FliO Xdur_010095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Xdur_010100 PF02154 Flagellar motor switch protein FliM Xdur_010100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Xdur_010120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Xdur_010120 PF18269 T3SS EscN ATPase C-terminal domain Xdur_010130 PF14842 FliG N-terminal domain Xdur_010130 PF01706 FliG C-terminal domain Xdur_010130 PF14841 FliG middle domain Xdur_010135 PF08345 Flagellar M-ring protein C-terminal Xdur_010135 PF01514 Secretory protein of YscJ/FliF family Xdur_010140 PF02049 Flagellar hook-basal body complex protein FliE Xdur_010145 PF00534 Glycosyl transferases group 1 Xdur_010145 PF00535 Glycosyl transferase family 2 Xdur_010180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Xdur_010180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Xdur_010190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Xdur_010195 PF02954 Bacterial regulatory protein, Fis family Xdur_010195 PF00158 Sigma-54 interaction domain Xdur_010195 PF06490 Flagellar regulatory protein FleQ Xdur_010200 PF00072 Response regulator receiver domain Xdur_010200 PF01339 CheB methylesterase Xdur_010205 PF00309 Sigma-54 factor, Activator interacting domain (AID) Xdur_010205 PF04963 Sigma-54 factor, core binding domain Xdur_010205 PF04552 Sigma-54, DNA binding domain Xdur_010210 PF00196 Bacterial regulatory proteins, luxR family Xdur_010210 PF00072 Response regulator receiver domain Xdur_010225 PF02561 Flagellar protein FliS Xdur_010230 PF07195 Flagellar hook-associated protein 2 C-terminus Xdur_010230 PF07196 Flagellin hook IN motif Xdur_010230 PF02465 Flagellar hook-associated protein 2 N-terminus Xdur_010240 PF00700 Bacterial flagellin C-terminal helical region Xdur_010240 PF00669 Bacterial flagellin N-terminal helical region Xdur_010245 PF00669 Bacterial flagellin N-terminal helical region Xdur_010245 PF00700 Bacterial flagellin C-terminal helical region Xdur_010250 PF07196 Flagellin hook IN motif Xdur_010250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Xdur_010255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Xdur_010255 PF10135 Rod binding protein Xdur_010260 PF02119 Flagellar P-ring protein Xdur_010265 PF02107 Flagellar L-ring protein Xdur_010270 PF00460 Flagella basal body rod protein Xdur_010270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Xdur_010275 PF00460 Flagella basal body rod protein Xdur_010275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Xdur_010280 PF07559 Flagellar basal body protein FlaE Xdur_010280 PF00460 Flagella basal body rod protein Xdur_010280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Xdur_010285 PF03963 Flagellar hook capping protein - N-terminal region Xdur_010290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Xdur_010290 PF00460 Flagella basal body rod protein Xdur_010300 PF01584 CheW-like domain Xdur_010300 PF00072 Response regulator receiver domain Xdur_010320 PF13426 PAS domain Xdur_010320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_010320 PF00512 His Kinase A (phospho-acceptor) domain Xdur_010320 PF00989 PAS fold Xdur_010320 PF13188 PAS domain Xdur_010325 PF00990 Diguanylate cyclase, GGDEF domain Xdur_010325 PF03707 Bacterial signalling protein N terminal repeat Xdur_010325 PF00563 EAL domain Xdur_010330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_010330 PF07730 Histidine kinase Xdur_010335 PF00563 EAL domain Xdur_010335 PF00990 Diguanylate cyclase, GGDEF domain Xdur_010335 PF03707 Bacterial signalling protein N terminal repeat Xdur_010345 PF12729 Four helix bundle sensory module for signal transduction Xdur_010345 PF00672 HAMP domain Xdur_010345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_010350 PF04356 Protein of unknown function (DUF489) Xdur_010360 PF00293 NUDIX domain Xdur_010365 PF02617 ATP-dependent Clp protease adaptor protein ClpS Xdur_010370 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_010370 PF07724 AAA domain (Cdc48 subfamily) Xdur_010370 PF17871 AAA lid domain Xdur_010370 PF02861 Clp amino terminal domain, pathogenicity island component Xdur_010370 PF10431 C-terminal, D2-small domain, of ClpB protein Xdur_010375 PF01176 Translation initiation factor 1A / IF-1 Xdur_010380 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Xdur_010390 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_010395 PF09397 Ftsk gamma domain Xdur_010395 PF01580 FtsK/SpoIIIE family Xdur_010395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Xdur_010395 PF17854 FtsK alpha domain Xdur_010405 PF03548 Outer membrane lipoprotein carrier protein LolA Xdur_010415 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_010415 PF16193 AAA C-terminal domain Xdur_010415 PF12002 MgsA AAA+ ATPase C terminal Xdur_010420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Xdur_010425 PF02803 Thiolase, C-terminal domain Xdur_010425 PF00108 Thiolase, N-terminal domain Xdur_010430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Xdur_010430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Xdur_010430 PF00378 Enoyl-CoA hydratase/isomerase Xdur_010440 PF00334 Nucleoside diphosphate kinase Xdur_010445 PF04055 Radical SAM superfamily Xdur_010455 PF13464 Domain of unknown function (DUF4115) Xdur_010465 PF01011 PQQ enzyme repeat Xdur_010465 PF13360 PQQ-like domain Xdur_010470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Xdur_010470 PF01926 50S ribosome-binding GTPase Xdur_010475 PF03453 MoeA N-terminal region (domain I and II) Xdur_010475 PF03454 MoeA C-terminal region (domain IV) Xdur_010475 PF00994 Probable molybdopterin binding domain Xdur_010480 PF00899 ThiF family Xdur_010505 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_010505 PF13823 Alcohol dehydrogenase GroES-associated Xdur_010505 PF00107 Zinc-binding dehydrogenase Xdur_010515 PF03372 Endonuclease/Exonuclease/phosphatase family Xdur_010525 PF00994 Probable molybdopterin binding domain Xdur_010525 PF03454 MoeA C-terminal region (domain IV) Xdur_010525 PF03453 MoeA N-terminal region (domain I and II) Xdur_010530 PF12804 MobA-like NTP transferase domain Xdur_010540 PF00561 alpha/beta hydrolase fold Xdur_010545 PF01566 Natural resistance-associated macrophage protein Xdur_010550 PF01325 Iron dependent repressor, N-terminal DNA binding domain Xdur_010550 PF02742 Iron dependent repressor, metal binding and dimerisation domain Xdur_010555 PF14437 MafB19-like deaminase Xdur_010560 PF00929 Exonuclease Xdur_010565 PF00924 Mechanosensitive ion channel Xdur_010565 PF05552 Conserved TM helix Xdur_010570 PF00391 PEP-utilising enzyme, mobile domain Xdur_010570 PF02896 PEP-utilising enzyme, TIM barrel domain Xdur_010570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Xdur_010575 PF03618 Kinase/pyrophosphorylase Xdur_010595 PF01066 CDP-alcohol phosphatidyltransferase Xdur_010605 PF00561 alpha/beta hydrolase fold Xdur_010620 PF01266 FAD dependent oxidoreductase Xdur_010620 PF00355 Rieske [2Fe-2S] domain Xdur_010630 PF09371 Tex-like protein N-terminal domain Xdur_010630 PF16921 Tex protein YqgF-like domain Xdur_010630 PF17674 HHH domain Xdur_010630 PF00575 S1 RNA binding domain Xdur_010635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_010635 PF00512 His Kinase A (phospho-acceptor) domain Xdur_010635 PF09308 LuxQ, periplasmic Xdur_010635 PF00072 Response regulator receiver domain Xdur_010675 PF00034 Cytochrome c Xdur_010685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_010690 PF00873 AcrB/AcrD/AcrF family Xdur_010695 PF00873 AcrB/AcrD/AcrF family Xdur_010700 PF01081 KDPG and KHG aldolase Xdur_010705 PF00920 Dehydratase family Xdur_010710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Xdur_010715 PF02685 Glucokinase Xdur_010720 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Xdur_010720 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Xdur_010725 PF00005 ABC transporter Xdur_010725 PF17912 MalK OB fold domain Xdur_010740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Xdur_010745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Xdur_010750 PF00890 FAD binding domain Xdur_010750 PF02910 Fumarate reductase flavoprotein C-term Xdur_010760 PF13085 2Fe-2S iron-sulfur cluster binding domain Xdur_010765 PF03937 Flavinator of succinate dehydrogenase Xdur_010775 PF02687 FtsX-like permease family Xdur_010775 PF12704 MacB-like periplasmic core domain Xdur_010780 PF00005 ABC transporter Xdur_010795 PF01618 MotA/TolQ/ExbB proton channel family Xdur_010805 PF00664 ABC transporter transmembrane region Xdur_010805 PF00005 ABC transporter Xdur_010810 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Xdur_010815 PF02348 Cytidylyltransferase Xdur_010820 PF01451 Low molecular weight phosphotyrosine protein phosphatase Xdur_010830 PF01541 GIY-YIG catalytic domain Xdur_010830 PF08459 UvrC Helix-hairpin-helix N-terminal Xdur_010830 PF02151 UvrB/uvrC motif Xdur_010835 PF01066 CDP-alcohol phosphatidyltransferase Xdur_010845 PF13356 Arm DNA-binding domain Xdur_010845 PF00589 Phage integrase family Xdur_010855 PF01381 Helix-turn-helix Xdur_010860 PF03466 LysR substrate binding domain Xdur_010860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_010880 PF04610 TrbL/VirB6 plasmid conjugal transfer protein Xdur_010960 PF04002 RadC-like JAB domain Xdur_011055 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Xdur_011155 PF01751 Toprim domain Xdur_011155 PF01131 DNA topoisomerase Xdur_011160 PF00436 Single-strand binding protein family Xdur_011195 PF13614 AAA domain Xdur_011210 PF00550 Phosphopantetheine attachment site Xdur_011210 PF00501 AMP-binding enzyme Xdur_011210 PF13193 AMP-binding enzyme C-terminal domain Xdur_011210 PF00668 Condensation domain Xdur_011215 PF00501 AMP-binding enzyme Xdur_011215 PF13193 AMP-binding enzyme C-terminal domain Xdur_011215 PF00668 Condensation domain Xdur_011215 PF00550 Phosphopantetheine attachment site Xdur_011215 PF00975 Thioesterase domain Xdur_011220 PF17837 4'-phosphopantetheinyl transferase N-terminal domain Xdur_011220 PF01648 4'-phosphopantetheinyl transferase superfamily Xdur_011230 PF00589 Phage integrase family Xdur_011240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Xdur_011240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Xdur_011240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Xdur_011250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Xdur_011260 PF00581 Rhodanese-like domain Xdur_011260 PF17773 UPF0176 acylphosphatase like domain Xdur_011265 PF00196 Bacterial regulatory proteins, luxR family Xdur_011265 PF00072 Response regulator receiver domain Xdur_011270 PF12111 Polyribonucleotide phosphorylase C terminal Xdur_011270 PF10150 Ribonuclease E/G family Xdur_011270 PF00575 S1 RNA binding domain Xdur_011275 PF00849 RNA pseudouridylate synthase Xdur_011275 PF01479 S4 domain Xdur_011280 PF11737 Protein of unknown function (DUF3300) Xdur_011285 PF02535 ZIP Zinc transporter Xdur_011295 PF01329 Pterin 4 alpha carbinolamine dehydratase Xdur_011300 PF01106 NifU-like domain Xdur_011345 PF12697 Alpha/beta hydrolase family Xdur_011345 PF08241 Methyltransferase domain Xdur_011390 PF01381 Helix-turn-helix Xdur_011395 PF05284 Protein of unknown function (DUF736) Xdur_011405 PF04002 RadC-like JAB domain Xdur_011435 PF13356 Arm DNA-binding domain Xdur_011435 PF00589 Phage integrase family Xdur_011460 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Xdur_011485 PF07715 TonB-dependent Receptor Plug Domain Xdur_011485 PF00593 TonB dependent receptor Xdur_011495 PF10947 Protein of unknown function (DUF2628) Xdur_011505 PF00722 Glycosyl hydrolases family 16 Xdur_011505 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Xdur_011525 PF03412 Peptidase C39 family Xdur_011525 PF00005 ABC transporter Xdur_011525 PF00664 ABC transporter transmembrane region Xdur_011535 PF13614 AAA domain Xdur_011575 PF01751 Toprim domain Xdur_011575 PF01131 DNA topoisomerase Xdur_011580 PF00145 C-5 cytosine-specific DNA methylase Xdur_011640 PF00892 EamA-like transporter family Xdur_011645 PF00892 EamA-like transporter family Xdur_011655 PF02525 Flavodoxin-like fold Xdur_011660 PF00043 Glutathione S-transferase, C-terminal domain Xdur_011660 PF02798 Glutathione S-transferase, N-terminal domain Xdur_011665 PF05544 Proline racemase Xdur_011670 PF03358 NADPH-dependent FMN reductase Xdur_011680 PF07690 Major Facilitator Superfamily Xdur_011685 PF12833 Helix-turn-helix domain Xdur_011685 PF02311 AraC-like ligand binding domain Xdur_011805 PF01119 DNA mismatch repair protein, C-terminal domain Xdur_011805 PF08676 MutL C terminal dimerisation domain Xdur_011810 PF03852 DNA mismatch endonuclease Vsr Xdur_011815 PF00145 C-5 cytosine-specific DNA methylase Xdur_011820 PF12728 Helix-turn-helix domain Xdur_011875 PF04002 RadC-like JAB domain Xdur_011940 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_011940 PF00107 Zinc-binding dehydrogenase Xdur_011950 PF07690 Major Facilitator Superfamily Xdur_011955 PF00330 Aconitase family (aconitate hydratase) Xdur_011960 PF00694 Aconitase C-terminal domain Xdur_011970 PF00355 Rieske [2Fe-2S] domain Xdur_011975 PF00175 Oxidoreductase NAD-binding domain Xdur_011975 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_011980 PF07883 Cupin domain Xdur_011985 PF01557 Fumarylacetoacetate (FAA) hydrolase family Xdur_011995 PF05853 beta-keto acid cleavage enzyme Xdur_012000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Xdur_012000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Xdur_012005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_012005 PF12806 Acetyl-CoA dehydrogenase C-terminal like Xdur_012005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_012005 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_012010 PF00378 Enoyl-CoA hydratase/isomerase Xdur_012020 PF13193 AMP-binding enzyme C-terminal domain Xdur_012020 PF00501 AMP-binding enzyme Xdur_012025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Xdur_012025 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_012030 PF01012 Electron transfer flavoprotein domain Xdur_012035 PF00766 Electron transfer flavoprotein FAD-binding domain Xdur_012035 PF01012 Electron transfer flavoprotein domain Xdur_012045 PF03466 LysR substrate binding domain Xdur_012045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_012050 PF01381 Helix-turn-helix Xdur_012075 PF04945 YHS domain Xdur_012090 PF13977 BetI-type transcriptional repressor, C-terminal Xdur_012090 PF00440 Bacterial regulatory proteins, tetR family Xdur_012095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_012095 PF00529 HlyD membrane-fusion protein of T1SS Xdur_012100 PF00873 AcrB/AcrD/AcrF family Xdur_012105 PF02321 Outer membrane efflux protein Xdur_012125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_012125 PF03466 LysR substrate binding domain Xdur_012130 PF01381 Helix-turn-helix Xdur_012140 PF00589 Phage integrase family Xdur_012140 PF14659 Phage integrase, N-terminal SAM-like domain Xdur_012140 PF13356 Arm DNA-binding domain Xdur_012215 PF00271 Helicase conserved C-terminal domain Xdur_012215 PF12137 RNA polymerase recycling family C-terminal Xdur_012215 PF00176 SNF2 family N-terminal domain Xdur_012215 PF18339 RapA N-terminal Tudor like domain 1 Xdur_012215 PF18337 RapA N-terminal Tudor like domain Xdur_012220 PF00145 C-5 cytosine-specific DNA methylase Xdur_012245 PF13614 AAA domain Xdur_012290 PF00436 Single-strand binding protein family Xdur_012295 PF01131 DNA topoisomerase Xdur_012295 PF01751 Toprim domain Xdur_012300 PF00145 C-5 cytosine-specific DNA methylase Xdur_012315 PF02021 Uncharacterised protein family UPF0102 Xdur_012405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Xdur_012525 PF13361 UvrD-like helicase C-terminal domain Xdur_012525 PF00580 UvrD/REP helicase N-terminal domain Xdur_012525 PF12462 DNA helicase IV / RNA helicase N terminal Xdur_012600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_012600 PF03466 LysR substrate binding domain Xdur_012605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Xdur_012605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Xdur_012610 PF03401 Tripartite tricarboxylate transporter family receptor Xdur_012625 PF04002 RadC-like JAB domain Xdur_012665 PF02540 NAD synthase Xdur_012665 PF00117 Glutamine amidotransferase class-I Xdur_012665 PF00958 GMP synthase C terminal domain Xdur_012670 PF00571 CBS domain Xdur_012670 PF00478 IMP dehydrogenase / GMP reductase domain Xdur_012675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Xdur_012675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Xdur_012685 PF00999 Sodium/hydrogen exchanger family Xdur_012685 PF02254 TrkA-N domain Xdur_012690 PF00483 Nucleotidyl transferase Xdur_012695 PF02719 Polysaccharide biosynthesis protein Xdur_012700 PF00953 Glycosyl transferase family 4 Xdur_012705 PF18073 Rubredoxin metal binding domain Xdur_012715 PF00216 Bacterial DNA-binding protein Xdur_012720 PF00575 S1 RNA binding domain Xdur_012725 PF02224 Cytidylate kinase Xdur_012730 PF00444 Ribosomal protein L36 Xdur_012740 PF04371 Porphyromonas-type peptidyl-arginine deiminase Xdur_012745 PF00795 Carbon-nitrogen hydrolase Xdur_012770 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_012775 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_012795 PF00356 Bacterial regulatory proteins, lacI family Xdur_012805 PF03795 YCII-related domain Xdur_012810 PF02616 Segregation and condensation protein ScpA Xdur_012815 PF04079 Segregation and condensation complex subunit ScpB Xdur_012820 PF01479 S4 domain Xdur_012820 PF00849 RNA pseudouridylate synthase Xdur_012835 PF00795 Carbon-nitrogen hydrolase Xdur_012840 PF00155 Aminotransferase class I and II Xdur_012845 PF00005 ABC transporter Xdur_012850 PF03379 CcmB protein Xdur_012855 PF01578 Cytochrome C assembly protein Xdur_012865 PF03100 CcmE Xdur_012870 PF01578 Cytochrome C assembly protein Xdur_012870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Xdur_012875 PF08534 Redoxin Xdur_012880 PF03918 Cytochrome C biogenesis protein Xdur_012890 PF00561 alpha/beta hydrolase fold Xdur_012895 PF00313 'Cold-shock' DNA-binding domain Xdur_012900 PF00664 ABC transporter transmembrane region Xdur_012900 PF00005 ABC transporter Xdur_012905 PF00664 ABC transporter transmembrane region Xdur_012905 PF00005 ABC transporter Xdur_012910 PF01654 Cytochrome bd terminal oxidase subunit I Xdur_012915 PF02322 Cytochrome bd terminal oxidase subunit II Xdur_012935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Xdur_012935 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Xdur_012940 PF00171 Aldehyde dehydrogenase family Xdur_012950 PF01472 PUA domain Xdur_012950 PF00696 Amino acid kinase family Xdur_012960 PF00206 Lyase Xdur_012965 PF01118 Semialdehyde dehydrogenase, NAD binding domain Xdur_012975 PF00696 Amino acid kinase family Xdur_012975 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase Xdur_012980 PF07687 Peptidase dimerisation domain Xdur_012980 PF01546 Peptidase family M20/M25/M40 Xdur_012990 PF00764 Arginosuccinate synthase Xdur_012995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Xdur_012995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Xdur_013005 PF01406 tRNA synthetases class I (C) catalytic domain Xdur_013005 PF09190 DALR domain Xdur_013010 PF02657 Fe-S metabolism associated domain Xdur_013020 PF01258 Prokaryotic dksA/traR C4-type zinc finger Xdur_013025 PF01809 Putative membrane protein insertion efficiency factor Xdur_013030 PF01979 Amidohydrolase family Xdur_013035 PF08460 Bacterial SH3 domain Xdur_013035 PF01551 Peptidase family M23 Xdur_013055 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Xdur_013060 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Xdur_013070 PF00753 Metallo-beta-lactamase superfamily Xdur_013100 PF00295 Glycosyl hydrolases family 28 Xdur_013110 PF13419 Haloacid dehalogenase-like hydrolase Xdur_013120 PF01979 Amidohydrolase family Xdur_013130 PF01132 Elongation factor P (EF-P) OB domain Xdur_013130 PF09285 Elongation factor P, C-terminal Xdur_013130 PF08207 Elongation factor P (EF-P) KOW-like domain Xdur_013135 PF04055 Radical SAM superfamily Xdur_013140 PF00563 EAL domain Xdur_013140 PF00990 Diguanylate cyclase, GGDEF domain Xdur_013140 PF03707 Bacterial signalling protein N terminal repeat Xdur_013140 PF13188 PAS domain Xdur_013150 PF00588 SpoU rRNA Methylase family Xdur_013155 PF00459 Inositol monophosphatase family Xdur_013160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Xdur_013160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Xdur_013165 PF00545 ribonuclease Xdur_013175 PF00005 ABC transporter Xdur_013175 PF16326 ABC transporter C-terminal domain Xdur_013175 PF12848 ABC transporter Xdur_013180 PF03880 DbpA RNA binding domain Xdur_013180 PF00270 DEAD/DEAH box helicase Xdur_013180 PF00271 Helicase conserved C-terminal domain Xdur_013185 PF00156 Phosphoribosyl transferase domain Xdur_013190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Xdur_013200 PF00135 Carboxylesterase family Xdur_013205 PF14497 Glutathione S-transferase, C-terminal domain Xdur_013205 PF02798 Glutathione S-transferase, N-terminal domain Xdur_013210 PF00313 'Cold-shock' DNA-binding domain Xdur_013215 PF07152 YaeQ protein Xdur_013225 PF00563 EAL domain Xdur_013225 PF00990 Diguanylate cyclase, GGDEF domain Xdur_013225 PF00072 Response regulator receiver domain Xdur_013230 PF01435 Peptidase family M48 Xdur_013235 PF00749 tRNA synthetases class I (E and Q), catalytic domain Xdur_013240 PF00106 short chain dehydrogenase Xdur_013245 PF07879 PHB/PHA accumulation regulator DNA-binding domain Xdur_013245 PF05233 PHB accumulation regulatory domain Xdur_013265 PF08676 MutL C terminal dimerisation domain Xdur_013265 PF01119 DNA mismatch repair protein, C-terminal domain Xdur_013270 PF11741 AMIN domain Xdur_013270 PF01520 N-acetylmuramoyl-L-alanine amidase Xdur_013275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Xdur_013280 PF03853 YjeF-related protein N-terminus Xdur_013280 PF01256 Carbohydrate kinase Xdur_013285 PF08331 Domain of unknown function (DUF1730) Xdur_013290 PF13742 OB-fold nucleic acid binding domain Xdur_013290 PF02601 Exonuclease VII, large subunit Xdur_013300 PF03781 Sulfatase-modifying factor enzyme 1 Xdur_013310 PF01612 3'-5' exonuclease Xdur_013310 PF00570 HRDC domain Xdur_013315 PF13298 DNA polymerase Ligase (LigD) Xdur_013315 PF04679 ATP dependent DNA ligase C terminal region Xdur_013315 PF01068 ATP dependent DNA ligase domain Xdur_013335 PF00589 Phage integrase family Xdur_013380 PF14850 DNA-binding domain of Proline dehydrogenase Xdur_013380 PF01619 Proline dehydrogenase Xdur_013380 PF00171 Aldehyde dehydrogenase family Xdur_013380 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Xdur_013395 PF02796 Helix-turn-helix domain of resolvase Xdur_013395 PF00239 Resolvase, N terminal domain Xdur_013410 PF02384 N-6 DNA Methylase Xdur_013415 PF09572 XamI restriction endonuclease Xdur_013495 PF01584 CheW-like domain Xdur_013500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_013500 PF12729 Four helix bundle sensory module for signal transduction Xdur_013500 PF00672 HAMP domain Xdur_013505 PF02245 Methylpurine-DNA glycosylase (MPG) Xdur_013510 PF00270 DEAD/DEAH box helicase Xdur_013510 PF00271 Helicase conserved C-terminal domain Xdur_013510 PF08494 DEAD/H associated Xdur_013530 PF04386 Stringent starvation protein B Xdur_013535 PF02798 Glutathione S-transferase, N-terminal domain Xdur_013535 PF00043 Glutathione S-transferase, C-terminal domain Xdur_013540 PF02167 Cytochrome C1 family Xdur_013545 PF00032 Cytochrome b(C-terminal)/b6/petD Xdur_013545 PF00033 Cytochrome b/b6/petB Xdur_013550 PF00355 Rieske [2Fe-2S] domain Xdur_013550 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Xdur_013555 PF01464 Transglycosylase SLT domain Xdur_013570 PF00919 Uncharacterized protein family UPF0004 Xdur_013570 PF01938 TRAM domain Xdur_013570 PF04055 Radical SAM superfamily Xdur_013575 PF02562 PhoH-like protein Xdur_013585 PF02130 Uncharacterized protein family UPF0054 Xdur_013595 PF03471 Transporter associated domain Xdur_013595 PF00571 CBS domain Xdur_013610 PF00171 Aldehyde dehydrogenase family Xdur_013615 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_013620 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_013625 PF08402 TOBE domain Xdur_013625 PF00005 ABC transporter Xdur_013630 PF02321 Outer membrane efflux protein Xdur_013635 PF07690 Major Facilitator Superfamily Xdur_013640 PF13533 Biotin-lipoyl like Xdur_013645 PF13416 Bacterial extracellular solute-binding protein Xdur_013650 PF00202 Aminotransferase class-III Xdur_013655 PF00120 Glutamine synthetase, catalytic domain Xdur_013660 PF07722 Peptidase C26 Xdur_013665 PF00120 Glutamine synthetase, catalytic domain Xdur_013670 PF01266 FAD dependent oxidoreductase Xdur_013675 PF00072 Response regulator receiver domain Xdur_013675 PF00990 Diguanylate cyclase, GGDEF domain Xdur_013680 PF01814 Hemerythrin HHE cation binding domain Xdur_013685 PF07690 Major Facilitator Superfamily Xdur_013685 PF00083 Sugar (and other) transporter Xdur_013695 PF00384 Molybdopterin oxidoreductase Xdur_013700 PF02634 FdhD/NarQ family Xdur_013705 PF07690 Major Facilitator Superfamily Xdur_013710 PF00202 Aminotransferase class-III Xdur_013720 PF04286 Protein of unknown function (DUF445) Xdur_013725 PF00672 HAMP domain Xdur_013725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_013725 PF01627 Hpt domain Xdur_013725 PF00512 His Kinase A (phospho-acceptor) domain Xdur_013725 PF00072 Response regulator receiver domain Xdur_013725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Xdur_013730 PF00072 Response regulator receiver domain Xdur_013735 PF07690 Major Facilitator Superfamily Xdur_013745 PF05088 Bacterial NAD-glutamate dehydrogenase Xdur_013755 PF00529 HlyD membrane-fusion protein of T1SS Xdur_013755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_013760 PF00873 AcrB/AcrD/AcrF family Xdur_013765 PF00356 Bacterial regulatory proteins, lacI family Xdur_013770 PF02896 PEP-utilising enzyme, TIM barrel domain Xdur_013770 PF00381 PTS HPr component phosphorylation site Xdur_013770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Xdur_013770 PF00391 PEP-utilising enzyme, mobile domain Xdur_013770 PF05524 PEP-utilising enzyme, N-terminal Xdur_013775 PF00294 pfkB family carbohydrate kinase Xdur_013780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Xdur_013825 PF07549 SecD/SecF GG Motif Xdur_013825 PF02355 Protein export membrane protein Xdur_013830 PF02355 Protein export membrane protein Xdur_013830 PF07549 SecD/SecF GG Motif Xdur_013830 PF13721 SecD export protein N-terminal TM region Xdur_013835 PF02699 Preprotein translocase subunit Xdur_013840 PF01702 Queuine tRNA-ribosyltransferase Xdur_013845 PF02547 Queuosine biosynthesis protein Xdur_013885 PF02927 Cellulase N-terminal ig-like domain Xdur_013885 PF00759 Glycosyl hydrolase family 9 Xdur_013895 PF00037 4Fe-4S binding domain Xdur_013905 PF01467 Cytidylyltransferase-like Xdur_013915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_013915 PF00183 Hsp90 protein Xdur_013955 PF00593 TonB dependent receptor Xdur_013955 PF07715 TonB-dependent Receptor Plug Domain Xdur_013965 PF04616 Glycosyl hydrolases family 43 Xdur_013970 PF07532 Bacterial Ig-like domain (group 4) Xdur_013975 PF00593 TonB dependent receptor Xdur_013975 PF07715 TonB-dependent Receptor Plug Domain Xdur_013985 PF00082 Subtilase family Xdur_013985 PF09286 Pro-kumamolisin, activation domain Xdur_014010 PF13520 Amino acid permease Xdur_014025 PF01321 Creatinase/Prolidase N-terminal domain Xdur_014025 PF00557 Metallopeptidase family M24 Xdur_014030 PF00171 Aldehyde dehydrogenase family Xdur_014035 PF00701 Dihydrodipicolinate synthetase family Xdur_014040 PF04324 BFD-like [2Fe-2S] binding domain Xdur_014040 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_014050 PF01266 FAD dependent oxidoreductase Xdur_014055 PF05544 Proline racemase Xdur_014065 PF00448 SRP54-type protein, GTPase domain Xdur_014065 PF02881 SRP54-type protein, helical bundle domain Xdur_014070 PF10576 Iron-sulfur binding domain of endonuclease III Xdur_014070 PF00633 Helix-hairpin-helix motif Xdur_014070 PF00730 HhH-GPD superfamily base excision DNA repair protein Xdur_014070 PF14815 NUDIX domain Xdur_014075 PF04362 Bacterial Fe(2+) trafficking Xdur_014080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_014080 PF00072 Response regulator receiver domain Xdur_014080 PF13426 PAS domain Xdur_014110 PF08212 Lipocalin-like domain Xdur_014125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_014125 PF02770 Acyl-CoA dehydrogenase, middle domain Xdur_014125 PF12806 Acetyl-CoA dehydrogenase C-terminal like Xdur_014125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_014135 PF02779 Transketolase, pyrimidine binding domain Xdur_014135 PF02780 Transketolase, C-terminal domain Xdur_014135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Xdur_014155 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Xdur_014160 PF16123 Hydroxyacylglutathione hydrolase C-terminus Xdur_014160 PF00753 Metallo-beta-lactamase superfamily Xdur_014165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Xdur_014165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Xdur_014180 PF03808 Glycosyl transferase WecB/TagA/CpsF family Xdur_014195 PF14667 Polysaccharide biosynthesis C-terminal domain Xdur_014205 PF00534 Glycosyl transferases group 1 Xdur_014205 PF13439 Glycosyltransferase Family 4 Xdur_014225 PF02397 Bacterial sugar transferase Xdur_014245 PF13411 MerR HTH family regulatory protein Xdur_014250 PF00216 Bacterial DNA-binding protein Xdur_014255 PF03483 B3/4 domain Xdur_014255 PF03484 tRNA synthetase B5 domain Xdur_014255 PF03147 Ferredoxin-fold anticodon binding domain Xdur_014255 PF01588 Putative tRNA binding domain Xdur_014255 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Xdur_014260 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Xdur_014260 PF01409 tRNA synthetases class II core domain (F) Xdur_014265 PF00453 Ribosomal protein L20 Xdur_014270 PF01632 Ribosomal protein L35 Xdur_014275 PF00707 Translation initiation factor IF-3, C-terminal domain Xdur_014275 PF05198 Translation initiation factor IF-3, N-terminal domain Xdur_014280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Xdur_014280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Xdur_014280 PF03129 Anticodon binding domain Xdur_014280 PF02824 TGS domain Xdur_014285 PF00356 Bacterial regulatory proteins, lacI family Xdur_014290 PF00128 Alpha amylase, catalytic domain Xdur_014290 PF00686 Starch binding domain Xdur_014295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Xdur_014305 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation Xdur_014305 PF14508 Glycosyl-hydrolase 97 N-terminal Xdur_014305 PF10566 Glycoside hydrolase 97 Xdur_014325 PF00128 Alpha amylase, catalytic domain Xdur_014380 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_014385 PF05101 Type IV secretory pathway, VirB3-like protein Xdur_014395 PF01464 Transglycosylase SLT domain Xdur_014400 PF00437 Type II/IV secretion system protein Xdur_014405 PF03743 Bacterial conjugation TrbI-like protein Xdur_014425 PF02534 Type IV secretory system Conjugative DNA transfer Xdur_014440 PF00271 Helicase conserved C-terminal domain Xdur_014440 PF12344 Ultra-violet resistance protein B Xdur_014440 PF02151 UvrB/uvrC motif Xdur_014440 PF04851 Type III restriction enzyme, res subunit Xdur_014440 PF17757 UvrB interaction domain Xdur_014520 PF01555 DNA methylase Xdur_014575 PF00182 Chitinase class I Xdur_014640 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor Xdur_014640 PF07963 Prokaryotic N-terminal methylation motif Xdur_014645 PF05567 Neisseria PilC beta-propeller domain Xdur_014670 PF06580 Histidine kinase Xdur_014670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_014670 PF07694 5TMR of 5TMR-LYT Xdur_014675 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Xdur_014675 PF11892 Domain of unknown function (DUF3412) Xdur_014675 PF03641 Possible lysine decarboxylase Xdur_014680 PF00593 TonB dependent receptor Xdur_014685 PF01914 MarC family integral membrane protein Xdur_014695 PF00462 Glutaredoxin Xdur_014700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Xdur_014700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Xdur_014705 PF02222 ATP-grasp domain Xdur_014705 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Xdur_014710 PF00731 AIR carboxylase Xdur_014720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Xdur_014720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Xdur_014730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Xdur_014730 PF00013 KH domain Xdur_014730 PF00575 S1 RNA binding domain Xdur_014730 PF01138 3' exoribonuclease family, domain 1 Xdur_014730 PF03725 3' exoribonuclease family, domain 2 Xdur_014735 PF00312 Ribosomal protein S15 Xdur_014740 PF01509 TruB family pseudouridylate synthase (N terminal domain) Xdur_014740 PF09157 Pseudouridine synthase II TruB, C-terminal Xdur_014740 PF16198 tRNA pseudouridylate synthase B C-terminal domain Xdur_014745 PF02033 Ribosome-binding factor A Xdur_014750 PF00009 Elongation factor Tu GTP binding domain Xdur_014750 PF11987 Translation-initiation factor 2 Xdur_014750 PF08364 Bacterial translation initiation factor IF-2 associated region Xdur_014750 PF04760 Translation initiation factor IF-2, N-terminal region Xdur_014755 PF13184 NusA-like KH domain Xdur_014755 PF08529 NusA N-terminal domain Xdur_014755 PF00575 S1 RNA binding domain Xdur_014760 PF02576 RimP N-terminal domain Xdur_014760 PF17384 RimP C-terminal SH3 domain Xdur_014770 PF00361 Proton-conducting membrane transporter Xdur_014775 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Xdur_014775 PF00361 Proton-conducting membrane transporter Xdur_014780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Xdur_014780 PF00361 Proton-conducting membrane transporter Xdur_014785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Xdur_014790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Xdur_014795 PF12838 4Fe-4S dicluster domain Xdur_014800 PF00146 NADH dehydrogenase Xdur_014805 PF00384 Molybdopterin oxidoreductase Xdur_014805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Xdur_014805 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Xdur_014810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Xdur_014810 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Xdur_014810 PF10531 SLBB domain Xdur_014820 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Xdur_014825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Xdur_014830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Xdur_014835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Xdur_014850 PF00121 Triosephosphate isomerase Xdur_014855 PF00106 short chain dehydrogenase Xdur_014870 PF03707 Bacterial signalling protein N terminal repeat Xdur_014870 PF00990 Diguanylate cyclase, GGDEF domain Xdur_014870 PF00563 EAL domain Xdur_014885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Xdur_014885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Xdur_014885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Xdur_014885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Xdur_014890 PF01039 Carboxyl transferase domain Xdur_014890 PF17848 Acetyl-coA carboxylase zinc finger domain Xdur_014895 PF00290 Tryptophan synthase alpha chain Xdur_014905 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_014910 PF03466 LysR substrate binding domain Xdur_014910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_014915 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Xdur_014920 PF01416 tRNA pseudouridine synthase Xdur_014940 PF02774 Semialdehyde dehydrogenase, dimerisation domain Xdur_014940 PF01118 Semialdehyde dehydrogenase, NAD binding domain Xdur_014945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Xdur_014945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Xdur_014950 PF01264 Chorismate synthase Xdur_014955 PF05175 Methyltransferase small domain Xdur_014960 PF02630 SCO1/SenC Xdur_014965 PF02666 Phosphatidylserine decarboxylase Xdur_014975 PF05872 Bacterial protein of unknown function (DUF853) Xdur_014980 PF00293 NUDIX domain Xdur_014995 PF01272 Transcription elongation factor, GreA/GreB, C-term Xdur_014995 PF03449 Transcription elongation factor, N-terminal Xdur_015000 PF18693 TRAM domain Xdur_015000 PF04055 Radical SAM superfamily Xdur_015000 PF00919 Uncharacterized protein family UPF0004 Xdur_015005 PF01738 Dienelactone hydrolase family Xdur_015025 PF00692 dUTPase Xdur_015030 PF10609 NUBPL iron-transfer P-loop NTPase Xdur_015035 PF00593 TonB dependent receptor Xdur_015035 PF07715 TonB-dependent Receptor Plug Domain Xdur_015050 PF01431 Peptidase family M13 Xdur_015050 PF05649 Peptidase family M13 Xdur_015055 PF01431 Peptidase family M13 Xdur_015055 PF05649 Peptidase family M13 Xdur_015070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Xdur_015075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Xdur_015075 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_015080 PF01266 FAD dependent oxidoreductase Xdur_015085 PF04235 Protein of unknown function (DUF418) Xdur_015090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Xdur_015095 PF00877 NlpC/P60 family Xdur_015100 PF00877 NlpC/P60 family Xdur_015115 PF00375 Sodium:dicarboxylate symporter family Xdur_015120 PF00245 Alkaline phosphatase Xdur_015125 PF09179 TilS substrate binding domain Xdur_015125 PF01171 PP-loop family Xdur_015125 PF11734 TilS substrate C-terminal domain Xdur_015130 PF02609 Exonuclease VII small subunit Xdur_015135 PF00348 Polyprenyl synthetase Xdur_015140 PF14521 Lysine-specific metallo-endopeptidase Xdur_015150 PF01523 Putative modulator of DNA gyrase Xdur_015155 PF04751 Protein of unknown function (DUF615) Xdur_015160 PF01523 Putative modulator of DNA gyrase Xdur_015170 PF13502 AsmA-like C-terminal region Xdur_015170 PF13116 Protein of unknown function Xdur_015175 PF00575 S1 RNA binding domain Xdur_015175 PF10150 Ribonuclease E/G family Xdur_015180 PF02545 Maf-like protein Xdur_015185 PF04402 Protein of unknown function (DUF541) Xdur_015200 PF02590 Predicted SPOUT methyltransferase Xdur_015215 PF01467 Cytidylyltransferase-like Xdur_015230 PF08264 Anticodon-binding domain of tRNA Xdur_015230 PF00133 tRNA synthetases class I (I, L, M and V) Xdur_015230 PF13603 Leucyl-tRNA synthetase, Domain 2 Xdur_015240 PF00085 Thioredoxin Xdur_015265 PF04070 Domain of unknown function (DUF378) Xdur_015270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Xdur_015280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_015280 PF03466 LysR substrate binding domain Xdur_015310 PF00664 ABC transporter transmembrane region Xdur_015310 PF00005 ABC transporter Xdur_015325 PF00873 AcrB/AcrD/AcrF family Xdur_015340 PF02321 Outer membrane efflux protein Xdur_015345 PF00072 Response regulator receiver domain Xdur_015345 PF00486 Transcriptional regulatory protein, C terminal Xdur_015350 PF00672 HAMP domain Xdur_015350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_015350 PF00512 His Kinase A (phospho-acceptor) domain Xdur_015355 PF00999 Sodium/hydrogen exchanger family Xdur_015360 PF00144 Beta-lactamase Xdur_015365 PF03737 Aldolase/RraA Xdur_015380 PF00990 Diguanylate cyclase, GGDEF domain Xdur_015385 PF00849 RNA pseudouridylate synthase Xdur_015385 PF01479 S4 domain Xdur_015390 PF08448 PAS fold Xdur_015390 PF00990 Diguanylate cyclase, GGDEF domain Xdur_015390 PF00563 EAL domain Xdur_015395 PF00270 DEAD/DEAH box helicase Xdur_015395 PF03880 DbpA RNA binding domain Xdur_015395 PF00271 Helicase conserved C-terminal domain Xdur_015445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Xdur_015445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Xdur_015455 PF00654 Voltage gated chloride channel Xdur_015460 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_015460 PF00107 Zinc-binding dehydrogenase Xdur_015480 PF00593 TonB dependent receptor Xdur_015480 PF07715 TonB-dependent Receptor Plug Domain Xdur_015490 PF00082 Subtilase family Xdur_015490 PF01483 Proprotein convertase P-domain Xdur_015500 PF00082 Subtilase family Xdur_015500 PF01483 Proprotein convertase P-domain Xdur_015510 PF00248 Aldo/keto reductase family Xdur_015515 PF07690 Major Facilitator Superfamily Xdur_015520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_015520 PF03466 LysR substrate binding domain Xdur_015530 PF12833 Helix-turn-helix domain Xdur_015530 PF06719 AraC-type transcriptional regulator N-terminus Xdur_015540 PF00440 Bacterial regulatory proteins, tetR family Xdur_015540 PF16859 Tetracyclin repressor-like, C-terminal domain Xdur_015545 PF02321 Outer membrane efflux protein Xdur_015550 PF00873 AcrB/AcrD/AcrF family Xdur_015555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_015555 PF00529 HlyD membrane-fusion protein of T1SS Xdur_015565 PF01475 Ferric uptake regulator family Xdur_015570 PF00749 tRNA synthetases class I (E and Q), catalytic domain Xdur_015595 PF06123 Inner membrane protein CreD Xdur_015610 PF00512 His Kinase A (phospho-acceptor) domain Xdur_015610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_015610 PF00672 HAMP domain Xdur_015615 PF00072 Response regulator receiver domain Xdur_015615 PF00486 Transcriptional regulatory protein, C terminal Xdur_015620 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Xdur_015630 PF17757 UvrB interaction domain Xdur_015630 PF03461 TRCF domain Xdur_015630 PF00271 Helicase conserved C-terminal domain Xdur_015630 PF02559 CarD-like/TRCF domain Xdur_015630 PF00270 DEAD/DEAH box helicase Xdur_015660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_015660 PF01584 CheW-like domain Xdur_015660 PF09078 CheY binding Xdur_015660 PF02895 Signal transducing histidine kinase, homodimeric domain Xdur_015660 PF01627 Hpt domain Xdur_015665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_015665 PF02203 Tar ligand binding domain homologue Xdur_015665 PF00672 HAMP domain Xdur_015670 PF01584 CheW-like domain Xdur_015675 PF00990 Diguanylate cyclase, GGDEF domain Xdur_015675 PF13426 PAS domain Xdur_015675 PF00563 EAL domain Xdur_015680 PF01739 CheR methyltransferase, SAM binding domain Xdur_015680 PF03705 CheR methyltransferase, all-alpha domain Xdur_015685 PF01339 CheB methylesterase Xdur_015685 PF00072 Response regulator receiver domain Xdur_015690 PF13091 PLD-like domain Xdur_015695 PF01431 Peptidase family M13 Xdur_015695 PF05649 Peptidase family M13 Xdur_015705 PF00300 Histidine phosphatase superfamily (branch 1) Xdur_015710 PF04493 Endonuclease V Xdur_015720 PF02678 Pirin Xdur_015720 PF05726 Pirin C-terminal cupin domain Xdur_015735 PF05726 Pirin C-terminal cupin domain Xdur_015735 PF02678 Pirin Xdur_015740 PF02554 Carbon starvation protein CstA Xdur_015740 PF13722 5TM C-terminal transporter carbon starvation CstA Xdur_015745 PF04328 Selenoprotein, putative Xdur_015780 PF02625 XdhC and CoxI family Xdur_015780 PF13478 XdhC Rossmann domain Xdur_015790 PF03450 CO dehydrogenase flavoprotein C-terminal domain Xdur_015790 PF00941 FAD binding domain in molybdopterin dehydrogenase Xdur_015805 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_015805 PF14765 Polyketide synthase dehydratase Xdur_015805 PF08990 Erythronolide synthase docking Xdur_015805 PF09277 Erythronolide synthase, docking Xdur_015805 PF16197 Ketoacyl-synthetase C-terminal extension Xdur_015805 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_015805 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_015805 PF00698 Acyl transferase domain Xdur_015805 PF00550 Phosphopantetheine attachment site Xdur_015805 PF08659 KR domain Xdur_015810 PF00360 Phytochrome region Xdur_015810 PF00563 EAL domain Xdur_015810 PF01590 GAF domain Xdur_015810 PF00990 Diguanylate cyclase, GGDEF domain Xdur_015815 PF00436 Single-strand binding protein family Xdur_015820 PF00348 Polyprenyl synthetase Xdur_015830 PF08245 Mur ligase middle domain Xdur_015830 PF02875 Mur ligase family, glutamate ligase domain Xdur_015845 PF01842 ACT domain Xdur_015845 PF00696 Amino acid kinase family Xdur_015850 PF02567 Phenazine biosynthesis-like protein Xdur_015855 PF02567 Phenazine biosynthesis-like protein Xdur_015865 PF02566 OsmC-like protein Xdur_015870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Xdur_015870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Xdur_015875 PF03652 Holliday junction resolvase Xdur_015880 PF02622 Uncharacterized ACR, COG1678 Xdur_015885 PF13302 Acetyltransferase (GNAT) domain Xdur_015885 PF00958 GMP synthase C terminal domain Xdur_015885 PF03352 Methyladenine glycosylase Xdur_015885 PF13673 Acetyltransferase (GNAT) domain Xdur_015885 PF00117 Glutamine amidotransferase class-I Xdur_015900 PF03211 Pectate lyase Xdur_015905 PF00437 Type II/IV secretion system protein Xdur_015910 PF00437 Type II/IV secretion system protein Xdur_015915 PF01168 Alanine racemase, N-terminal domain Xdur_015920 PF03807 NADP oxidoreductase coenzyme F420-dependent Xdur_015920 PF14748 Pyrroline-5-carboxylate reductase dimerisation Xdur_015930 PF01551 Peptidase family M23 Xdur_015950 PF01965 DJ-1/PfpI family Xdur_015960 PF02082 Transcriptional regulator Xdur_015965 PF01458 Uncharacterized protein family (UPF0051) Xdur_015970 PF00005 ABC transporter Xdur_015975 PF01458 Uncharacterized protein family (UPF0051) Xdur_015980 PF00266 Aminotransferase class-V Xdur_015990 PF00355 Rieske [2Fe-2S] domain Xdur_015995 PF00593 TonB dependent receptor Xdur_015995 PF07715 TonB-dependent Receptor Plug Domain Xdur_016000 PF18331 PKHD-type hydroxylase C-terminal domain Xdur_016000 PF13640 2OG-Fe(II) oxygenase superfamily Xdur_016025 PF02424 ApbE family Xdur_016030 PF00667 FAD binding domain Xdur_016030 PF00258 Flavodoxin Xdur_016030 PF00175 Oxidoreductase NAD-binding domain Xdur_016050 PF07687 Peptidase dimerisation domain Xdur_016050 PF01546 Peptidase family M20/M25/M40 Xdur_016060 PF01636 Phosphotransferase enzyme family Xdur_016065 PF00483 Nucleotidyl transferase Xdur_016070 PF00308 Bacterial dnaA protein Xdur_016075 PF01594 AI-2E family transporter Xdur_016085 PF00586 AIR synthase related protein, N-terminal domain Xdur_016085 PF02769 AIR synthase related protein, C-terminal domain Xdur_016095 PF00551 Formyl transferase Xdur_016115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Xdur_016120 PF01722 BolA-like protein Xdur_016125 PF00571 CBS domain Xdur_016125 PF01380 SIS domain Xdur_016140 PF03968 OstA-like protein Xdur_016145 PF00005 ABC transporter Xdur_016150 PF00309 Sigma-54 factor, Activator interacting domain (AID) Xdur_016150 PF04963 Sigma-54 factor, core binding domain Xdur_016150 PF04552 Sigma-54, DNA binding domain Xdur_016155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Xdur_016160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Xdur_016165 PF07475 HPr Serine kinase C-terminal domain Xdur_016165 PF02603 HPr Serine kinase N terminus Xdur_016170 PF03668 P-loop ATPase protein family Xdur_016180 PF00381 PTS HPr component phosphorylation site Xdur_016185 PF05524 PEP-utilising enzyme, N-terminal Xdur_016185 PF00391 PEP-utilising enzyme, mobile domain Xdur_016185 PF02896 PEP-utilising enzyme, TIM barrel domain Xdur_016190 PF00571 CBS domain Xdur_016190 PF01769 Divalent cation transporter Xdur_016190 PF03448 MgtE intracellular N domain Xdur_016195 PF00756 Putative esterase Xdur_016205 PF02322 Cytochrome bd terminal oxidase subunit II Xdur_016210 PF01654 Cytochrome bd terminal oxidase subunit I Xdur_016220 PF00324 Amino acid permease Xdur_016225 PF00544 Pectate lyase Xdur_016230 PF00561 alpha/beta hydrolase fold Xdur_016240 PF00196 Bacterial regulatory proteins, luxR family Xdur_016250 PF00324 Amino acid permease Xdur_016270 PF12706 Beta-lactamase superfamily domain Xdur_016275 PF04820 Tryptophan halogenase Xdur_016300 PF00376 MerR family regulatory protein Xdur_016300 PF09278 MerR, DNA binding Xdur_016305 PF07690 Major Facilitator Superfamily Xdur_016310 PF03738 Glutathionylspermidine synthase preATP-grasp Xdur_016335 PF04012 PspA/IM30 family Xdur_016345 PF01243 Pyridoxamine 5'-phosphate oxidase Xdur_016345 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Xdur_016350 PF01202 Shikimate kinase Xdur_016355 PF01761 3-dehydroquinate synthase Xdur_016365 PF01208 Uroporphyrinogen decarboxylase (URO-D) Xdur_016435 PF00158 Sigma-54 interaction domain Xdur_016435 PF02954 Bacterial regulatory protein, Fis family Xdur_016435 PF01590 GAF domain Xdur_016440 PF07690 Major Facilitator Superfamily Xdur_016445 PF00072 Response regulator receiver domain Xdur_016445 PF17149 Periplasmic sensor domain found in signal transduction proteins Xdur_016445 PF01627 Hpt domain Xdur_016445 PF00512 His Kinase A (phospho-acceptor) domain Xdur_016445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_016445 PF00672 HAMP domain Xdur_016450 PF00072 Response regulator receiver domain Xdur_016450 PF01627 Hpt domain Xdur_016450 PF00672 HAMP domain Xdur_016450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_016450 PF00512 His Kinase A (phospho-acceptor) domain Xdur_016450 PF17149 Periplasmic sensor domain found in signal transduction proteins Xdur_016460 PF01627 Hpt domain Xdur_016460 PF00512 His Kinase A (phospho-acceptor) domain Xdur_016460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_016460 PF00072 Response regulator receiver domain Xdur_016465 PF04264 YceI-like domain Xdur_016485 PF03315 Serine dehydratase beta chain Xdur_016485 PF03313 Serine dehydratase alpha chain Xdur_016490 PF12697 Alpha/beta hydrolase family Xdur_016495 PF00696 Amino acid kinase family Xdur_016495 PF03447 Homoserine dehydrogenase, NAD binding domain Xdur_016495 PF00742 Homoserine dehydrogenase Xdur_016500 PF01053 Cys/Met metabolism PLP-dependent enzyme Xdur_016505 PF00561 alpha/beta hydrolase fold Xdur_016510 PF01551 Peptidase family M23 Xdur_016510 PF08525 Opacity-associated protein A N-terminal motif Xdur_016510 PF01476 LysM domain Xdur_016515 PF16658 Class II release factor RF3, C-terminal domain Xdur_016515 PF00009 Elongation factor Tu GTP binding domain Xdur_016520 PF03006 Haemolysin-III related Xdur_016525 PF05170 AsmA family Xdur_016530 PF00571 CBS domain Xdur_016530 PF00478 IMP dehydrogenase / GMP reductase domain Xdur_016535 PF00535 Glycosyl transferase family 2 Xdur_016540 PF00912 Transglycosylase Xdur_016545 PF01430 Hsp33 protein Xdur_016555 PF00593 TonB dependent receptor Xdur_016555 PF07715 TonB-dependent Receptor Plug Domain Xdur_016565 PF00440 Bacterial regulatory proteins, tetR family Xdur_016570 PF00561 alpha/beta hydrolase fold Xdur_016575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Xdur_016575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Xdur_016575 PF09317 Domain of unknown function (DUF1974) Xdur_016605 PF01597 Glycine cleavage H-protein Xdur_016610 PF01571 Aminomethyltransferase folate-binding domain Xdur_016610 PF08669 Glycine cleavage T-protein C-terminal barrel domain Xdur_016620 PF01145 SPFH domain / Band 7 family Xdur_016620 PF16200 C-terminal region of band_7 Xdur_016625 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Xdur_016630 PF03819 MazG nucleotide pyrophosphohydrolase domain Xdur_016635 PF00459 Inositol monophosphatase family Xdur_016640 PF00293 NUDIX domain Xdur_016645 PF00202 Aminotransferase class-III Xdur_016650 PF04452 RNA methyltransferase Xdur_016655 PF02685 Glucokinase Xdur_016670 PF00704 Glycosyl hydrolases family 18 Xdur_016670 PF01476 LysM domain Xdur_016675 PF00728 Glycosyl hydrolase family 20, catalytic domain Xdur_016675 PF02838 Glycosyl hydrolase family 20, domain 2 Xdur_016675 PF07691 PA14 domain Xdur_016685 PF01915 Glycosyl hydrolase family 3 C-terminal domain Xdur_016685 PF07691 PA14 domain Xdur_016685 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_016685 PF14310 Fibronectin type III-like domain Xdur_016695 PF01301 Glycosyl hydrolases family 35 Xdur_016700 PF13520 Amino acid permease Xdur_016710 PF02056 Family 4 glycosyl hydrolase Xdur_016710 PF11975 Family 4 glycosyl hydrolase C-terminal domain Xdur_016720 PF17678 Glycosyl hydrolase family 92 N-terminal domain Xdur_016720 PF07971 Glycosyl hydrolase family 92 Xdur_016725 PF01301 Glycosyl hydrolases family 35 Xdur_016755 PF03932 CutC family Xdur_016760 PF01112 Asparaginase Xdur_016765 PF13302 Acetyltransferase (GNAT) domain Xdur_016780 PF01627 Hpt domain Xdur_016780 PF01584 CheW-like domain Xdur_016780 PF02895 Signal transducing histidine kinase, homodimeric domain Xdur_016780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_016780 PF00072 Response regulator receiver domain Xdur_016785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_016785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Xdur_016790 PF01584 CheW-like domain Xdur_016795 PF00072 Response regulator receiver domain Xdur_016800 PF00072 Response regulator receiver domain Xdur_016805 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Xdur_016805 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Xdur_016815 PF03747 ADP-ribosylglycohydrolase Xdur_016820 PF00814 Glycoprotease family Xdur_016825 PF04851 Type III restriction enzyme, res subunit Xdur_016825 PF13307 Helicase C-terminal domain Xdur_016835 PF14814 Bifunctional transglycosylase second domain Xdur_016835 PF00905 Penicillin binding protein transpeptidase domain Xdur_016835 PF00912 Transglycosylase Xdur_016840 PF00535 Glycosyl transferase family 2 Xdur_016850 PF13291 ACT domain Xdur_016850 PF02824 TGS domain Xdur_016850 PF04607 Region found in RelA / SpoT proteins Xdur_016855 PF08042 PqqA family Xdur_016860 PF12706 Beta-lactamase superfamily domain Xdur_016865 PF03070 TENA/THI-4/PQQC family Xdur_016870 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Xdur_016875 PF13186 Iron-sulfur cluster-binding domain Xdur_016875 PF04055 Radical SAM superfamily Xdur_016890 PF02685 Glucokinase Xdur_016905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Xdur_016905 PF00270 DEAD/DEAH box helicase Xdur_016905 PF04408 Helicase associated domain (HA2) Xdur_016905 PF11898 Domain of unknown function (DUF3418) Xdur_016905 PF00271 Helicase conserved C-terminal domain Xdur_016910 PF00210 Ferritin-like domain Xdur_016915 PF00270 DEAD/DEAH box helicase Xdur_016915 PF00271 Helicase conserved C-terminal domain Xdur_016915 PF00570 HRDC domain Xdur_016915 PF09382 RQC domain Xdur_016915 PF16124 RecQ zinc-binding Xdur_016945 PF02203 Tar ligand binding domain homologue Xdur_016945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_016945 PF00672 HAMP domain Xdur_016950 PF01810 LysE type translocator Xdur_016955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_016955 PF03466 LysR substrate binding domain Xdur_016965 PF07536 HWE histidine kinase Xdur_016965 PF13581 Histidine kinase-like ATPase domain Xdur_016965 PF13426 PAS domain Xdur_016970 PF06508 Queuosine biosynthesis protein QueC Xdur_016980 PF04055 Radical SAM superfamily Xdur_016990 PF00691 OmpA family Xdur_016995 PF04052 TolB amino-terminal domain Xdur_016995 PF07676 WD40-like Beta Propeller Repeat Xdur_017005 PF02472 Biopolymer transport protein ExbD/TolR Xdur_017010 PF01618 MotA/TolQ/ExbB proton channel family Xdur_017015 PF03061 Thioesterase superfamily Xdur_017020 PF17864 RuvB AAA lid domain Xdur_017020 PF05491 RuvB C-terminal winged helix domain Xdur_017020 PF05496 Holliday junction DNA helicase RuvB P-loop domain Xdur_017030 PF02705 K+ potassium transporter Xdur_017035 PF01330 RuvA N terminal domain Xdur_017035 PF07499 RuvA, C-terminal domain Xdur_017040 PF02075 Crossover junction endodeoxyribonuclease RuvC Xdur_017045 PF01709 Transcriptional regulator Xdur_017060 PF02938 GAD domain Xdur_017060 PF00152 tRNA synthetases class II (D, K and N) Xdur_017060 PF01336 OB-fold nucleic acid binding domain Xdur_017075 PF07690 Major Facilitator Superfamily Xdur_017085 PF05506 Domain of unknown function (DUF756) Xdur_017085 PF04185 Phosphoesterase family Xdur_017105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_017105 PF03466 LysR substrate binding domain Xdur_017115 PF00005 ABC transporter Xdur_017115 PF12848 ABC transporter Xdur_017120 PF07715 TonB-dependent Receptor Plug Domain Xdur_017120 PF00593 TonB dependent receptor Xdur_017130 PF07715 TonB-dependent Receptor Plug Domain Xdur_017130 PF00593 TonB dependent receptor Xdur_017135 PF00593 TonB dependent receptor Xdur_017135 PF07715 TonB-dependent Receptor Plug Domain Xdur_017140 PF00067 Cytochrome P450 Xdur_017145 PF00999 Sodium/hydrogen exchanger family Xdur_017145 PF02254 TrkA-N domain Xdur_017170 PF00593 TonB dependent receptor Xdur_017170 PF07715 TonB-dependent Receptor Plug Domain Xdur_017170 PF07660 Secretin and TonB N terminus short domain Xdur_017180 PF06276 Ferric iron reductase FhuF-like transporter Xdur_017180 PF04183 IucA / IucC family Xdur_017185 PF07690 Major Facilitator Superfamily Xdur_017190 PF06276 Ferric iron reductase FhuF-like transporter Xdur_017190 PF04183 IucA / IucC family Xdur_017195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Xdur_017195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Xdur_017215 PF02654 Cobalamin-5-phosphate synthase Xdur_017225 PF02277 Phosphoribosyltransferase Xdur_017230 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Xdur_017235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Xdur_017235 PF07685 CobB/CobQ-like glutamine amidotransferase domain Xdur_017240 PF00155 Aminotransferase class I and II Xdur_017245 PF17113 Regulatory signalling modulator protein AmpE Xdur_017245 PF03186 CobD/Cbib protein Xdur_017250 PF12557 Cob(I)alamin adenosyltransferase N terminal Xdur_017250 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Xdur_017265 PF07715 TonB-dependent Receptor Plug Domain Xdur_017265 PF00593 TonB dependent receptor Xdur_017270 PF02861 Clp amino terminal domain, pathogenicity island component Xdur_017270 PF10431 C-terminal, D2-small domain, of ClpB protein Xdur_017270 PF17871 AAA lid domain Xdur_017270 PF07724 AAA domain (Cdc48 subfamily) Xdur_017270 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_017275 PF00005 ABC transporter Xdur_017280 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_017285 PF09084 NMT1/THI5 like Xdur_017290 PF00248 Aldo/keto reductase family Xdur_017295 PF00296 Luciferase-like monooxygenase Xdur_017300 PF00593 TonB dependent receptor Xdur_017300 PF07715 TonB-dependent Receptor Plug Domain Xdur_017305 PF01541 GIY-YIG catalytic domain Xdur_017340 PF07715 TonB-dependent Receptor Plug Domain Xdur_017340 PF00593 TonB dependent receptor Xdur_017345 PF02358 Trehalose-phosphatase Xdur_017350 PF00723 Glycosyl hydrolases family 15 Xdur_017355 PF00982 Glycosyltransferase family 20 Xdur_017360 PF01011 PQQ enzyme repeat Xdur_017365 PF00672 HAMP domain Xdur_017365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_017365 PF02203 Tar ligand binding domain homologue Xdur_017370 PF04134 Protein of unknown function, DUF393 Xdur_017380 PF02578 Multi-copper polyphenol oxidoreductase laccase Xdur_017385 PF00849 RNA pseudouridylate synthase Xdur_017390 PF13525 Outer membrane lipoprotein Xdur_017400 PF02540 NAD synthase Xdur_017400 PF00795 Carbon-nitrogen hydrolase Xdur_017420 PF13406 Transglycosylase SLT domain Xdur_017425 PF01526 Tn3 transposase DDE domain Xdur_017425 PF13700 Domain of unknown function (DUF4158) Xdur_017485 PF00549 CoA-ligase Xdur_017485 PF02629 CoA binding domain Xdur_017490 PF00549 CoA-ligase Xdur_017490 PF08442 ATP-grasp domain Xdur_017495 PF00512 His Kinase A (phospho-acceptor) domain Xdur_017495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_017505 PF00437 Type II/IV secretion system protein Xdur_017505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Xdur_017510 PF00437 Type II/IV secretion system protein Xdur_017510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Xdur_017515 PF00437 Type II/IV secretion system protein Xdur_017515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Xdur_017535 PF07963 Prokaryotic N-terminal methylation motif Xdur_017535 PF00114 Pilin (bacterial filament) Xdur_017540 PF00482 Type II secretion system (T2SS), protein F Xdur_017545 PF06750 Bacterial Peptidase A24 N-terminal domain Xdur_017545 PF01478 Type IV leader peptidase family Xdur_017550 PF01121 Dephospho-CoA kinase Xdur_017575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_017575 PF00989 PAS fold Xdur_017575 PF16736 Single Cache-like Xdur_017575 PF00512 His Kinase A (phospho-acceptor) domain Xdur_017580 PF00072 Response regulator receiver domain Xdur_017580 PF00486 Transcriptional regulatory protein, C terminal Xdur_017595 PF00128 Alpha amylase, catalytic domain Xdur_017595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Xdur_017685 PF05690 Thiazole biosynthesis protein ThiG Xdur_017690 PF02390 Putative methyltransferase Xdur_017695 PF02080 TrkA-C domain Xdur_017695 PF03600 Citrate transporter Xdur_017710 PF01557 Fumarylacetoacetate (FAA) hydrolase family Xdur_017715 PF01741 Large-conductance mechanosensitive channel, MscL Xdur_017725 PF00356 Bacterial regulatory proteins, lacI family Xdur_017735 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain Xdur_017735 PF00703 Glycosyl hydrolases family 2 Xdur_017735 PF02837 Glycosyl hydrolases family 2, sugar binding domain Xdur_017740 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation Xdur_017740 PF14508 Glycosyl-hydrolase 97 N-terminal Xdur_017740 PF10566 Glycoside hydrolase 97 Xdur_017750 PF00135 Carboxylesterase family Xdur_017755 PF00588 SpoU rRNA Methylase family Xdur_017755 PF08032 RNA 2'-O ribose methyltransferase substrate binding Xdur_017765 PF01433 Peptidase family M1 domain Xdur_017765 PF11838 ERAP1-like C-terminal domain Xdur_017800 PF00873 AcrB/AcrD/AcrF family Xdur_017805 PF00529 HlyD membrane-fusion protein of T1SS Xdur_017805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_017810 PF00009 Elongation factor Tu GTP binding domain Xdur_017815 PF01507 Phosphoadenosine phosphosulfate reductase family Xdur_017820 PF00258 Flavodoxin Xdur_017820 PF00175 Oxidoreductase NAD-binding domain Xdur_017820 PF00667 FAD binding domain Xdur_017825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Xdur_017825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Xdur_017830 PF01507 Phosphoadenosine phosphosulfate reductase family Xdur_017850 PF00072 Response regulator receiver domain Xdur_017850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_017850 PF00512 His Kinase A (phospho-acceptor) domain Xdur_017850 PF01627 Hpt domain Xdur_017860 PF03466 LysR substrate binding domain Xdur_017860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_017865 PF10414 Sirohaem synthase dimerisation region Xdur_017865 PF14824 Sirohaem biosynthesis protein central Xdur_017865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Xdur_017870 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_017880 PF01661 Macro domain Xdur_017885 PF00274 Fructose-bisphosphate aldolase class-I Xdur_017890 PF02887 Pyruvate kinase, alpha/beta domain Xdur_017890 PF00224 Pyruvate kinase, barrel domain Xdur_017895 PF13419 Haloacid dehalogenase-like hydrolase Xdur_017900 PF00162 Phosphoglycerate kinase Xdur_017920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Xdur_017920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Xdur_017930 PF03922 OmpW family Xdur_017935 PF03922 OmpW family Xdur_017945 PF04273 Putative phosphatase (DUF442) Xdur_017945 PF00753 Metallo-beta-lactamase superfamily Xdur_017955 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_017960 PF03459 TOBE domain Xdur_017960 PF00005 ABC transporter Xdur_017995 PF01476 LysM domain Xdur_017995 PF03734 L,D-transpeptidase catalytic domain Xdur_018000 PF04225 Opacity-associated protein A LysM-like domain Xdur_018000 PF01551 Peptidase family M23 Xdur_018010 PF00593 TonB dependent receptor Xdur_018010 PF07715 TonB-dependent Receptor Plug Domain Xdur_018015 PF12146 Serine aminopeptidase, S33 Xdur_018020 PF00456 Transketolase, thiamine diphosphate binding domain Xdur_018020 PF02779 Transketolase, pyrimidine binding domain Xdur_018020 PF02780 Transketolase, C-terminal domain Xdur_018025 PF00375 Sodium:dicarboxylate symporter family Xdur_018035 PF07584 Aerotolerance regulator N-terminal Xdur_018035 PF00092 von Willebrand factor type A domain Xdur_018055 PF07726 ATPase family associated with various cellular activities (AAA) Xdur_018055 PF17863 AAA lid domain Xdur_018060 PF11741 AMIN domain Xdur_018060 PF00263 Bacterial type II and III secretion system protein Xdur_018060 PF03958 Bacterial type II/III secretion system short domain Xdur_018060 PF07660 Secretin and TonB N terminus short domain Xdur_018065 PF04351 Pilus assembly protein, PilP Xdur_018070 PF04350 Pilus assembly protein, PilO Xdur_018075 PF05137 Fimbrial assembly protein (PilN) Xdur_018080 PF11104 Type IV pilus assembly protein PilM; Xdur_018085 PF00905 Penicillin binding protein transpeptidase domain Xdur_018085 PF17092 Penicillin-binding protein OB-like domain Xdur_018085 PF00912 Transglycosylase Xdur_018095 PF00285 Citrate synthase, C-terminal domain Xdur_018100 PF01197 Ribosomal protein L31 Xdur_018105 PF01156 Inosine-uridine preferring nucleoside hydrolase Xdur_018110 PF00271 Helicase conserved C-terminal domain Xdur_018110 PF17191 RecG wedge domain Xdur_018110 PF00270 DEAD/DEAH box helicase Xdur_018115 PF01042 Endoribonuclease L-PSP Xdur_018120 PF02824 TGS domain Xdur_018120 PF13291 ACT domain Xdur_018120 PF04607 Region found in RelA / SpoT proteins Xdur_018125 PF01192 RNA polymerase Rpb6 Xdur_018130 PF00625 Guanylate kinase Xdur_018135 PF08340 Domain of unknown function (DUF1732) Xdur_018135 PF03755 YicC-like family, N-terminal region Xdur_018140 PF01138 3' exoribonuclease family, domain 1 Xdur_018140 PF03725 3' exoribonuclease family, domain 2 Xdur_018150 PF01725 Ham1 family Xdur_018155 PF06969 HemN C-terminal domain Xdur_018155 PF04055 Radical SAM superfamily Xdur_018170 PF00557 Metallopeptidase family M24 Xdur_018180 PF00557 Metallopeptidase family M24 Xdur_018180 PF05195 Aminopeptidase P, N-terminal domain Xdur_018185 PF03695 Uncharacterised protein family (UPF0149) Xdur_018195 PF05164 Cell division protein ZapA Xdur_018205 PF01812 5-formyltetrahydrofolate cyclo-ligase family Xdur_018215 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Xdur_018225 PF13369 Transglutaminase-like superfamily Xdur_018230 PF00301 Rubredoxin Xdur_018235 PF02581 Thiamine monophosphate synthase Xdur_018250 PF00202 Aminotransferase class-III Xdur_018255 PF00196 Bacterial regulatory proteins, luxR family Xdur_018255 PF17874 MalT-like TPR region Xdur_018260 PF00127 Copper binding proteins, plastocyanin/azurin family Xdur_018265 PF00155 Aminotransferase class I and II Xdur_018275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Xdur_018275 PF00034 Cytochrome c Xdur_018280 PF01593 Flavin containing amine oxidoreductase Xdur_018295 PF00202 Aminotransferase class-III Xdur_018300 PF00027 Cyclic nucleotide-binding domain Xdur_018300 PF00520 Ion transport protein Xdur_018320 PF01569 PAP2 superfamily Xdur_018325 PF01062 Bestrophin, RFP-TM, chloride channel Xdur_018335 PF08245 Mur ligase middle domain Xdur_018335 PF02875 Mur ligase family, glutamate ligase domain Xdur_018335 PF01225 Mur ligase family, catalytic domain Xdur_018345 PF00365 Phosphofructokinase Xdur_018355 PF03030 Inorganic H+ pyrophosphatase Xdur_018365 PF00719 Inorganic pyrophosphatase Xdur_018375 PF00593 TonB dependent receptor Xdur_018375 PF07715 TonB-dependent Receptor Plug Domain Xdur_018380 PF12833 Helix-turn-helix domain Xdur_018385 PF00486 Transcriptional regulatory protein, C terminal Xdur_018385 PF18500 CadC C-terminal domain 1 Xdur_018390 PF01964 Radical SAM ThiC family Xdur_018390 PF13667 ThiC-associated domain Xdur_018395 PF07715 TonB-dependent Receptor Plug Domain Xdur_018395 PF00593 TonB dependent receptor Xdur_018400 PF00672 HAMP domain Xdur_018400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_018400 PF02203 Tar ligand binding domain homologue Xdur_018410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Xdur_018410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Xdur_018415 PF00205 Thiamine pyrophosphate enzyme, central domain Xdur_018415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Xdur_018415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Xdur_018425 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_018430 PF00682 HMGL-like Xdur_018430 PF08502 LeuA allosteric (dimerisation) domain Xdur_018435 PF00180 Isocitrate/isopropylmalate dehydrogenase Xdur_018440 PF00694 Aconitase C-terminal domain Xdur_018445 PF00330 Aconitase family (aconitate hydratase) Xdur_018450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_018455 PF00990 Diguanylate cyclase, GGDEF domain Xdur_018470 PF02321 Outer membrane efflux protein Xdur_018475 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Xdur_018480 PF03279 Bacterial lipid A biosynthesis acyltransferase Xdur_018505 PF03949 Malic enzyme, NAD binding domain Xdur_018505 PF01515 Phosphate acetyl/butaryl transferase Xdur_018505 PF00390 Malic enzyme, N-terminal domain Xdur_018510 PF00375 Sodium:dicarboxylate symporter family Xdur_018520 PF02743 Cache domain Xdur_018520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_018520 PF00512 His Kinase A (phospho-acceptor) domain Xdur_018525 PF07690 Major Facilitator Superfamily Xdur_018535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_018535 PF03466 LysR substrate binding domain Xdur_018540 PF00248 Aldo/keto reductase family Xdur_018555 PF00196 Bacterial regulatory proteins, luxR family Xdur_018555 PF00072 Response regulator receiver domain Xdur_018565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_018565 PF00512 His Kinase A (phospho-acceptor) domain Xdur_018565 PF08521 Two-component sensor kinase N-terminal Xdur_018570 PF00486 Transcriptional regulatory protein, C terminal Xdur_018570 PF00072 Response regulator receiver domain Xdur_018580 PF03600 Citrate transporter Xdur_018585 PF00106 short chain dehydrogenase Xdur_018590 PF00356 Bacterial regulatory proteins, lacI family Xdur_018605 PF00128 Alpha amylase, catalytic domain Xdur_018620 PF03193 RsgA GTPase Xdur_018625 PF00155 Aminotransferase class I and II Xdur_018640 PF07715 TonB-dependent Receptor Plug Domain Xdur_018640 PF00593 TonB dependent receptor Xdur_018645 PF01522 Polysaccharide deacetylase Xdur_018650 PF00462 Glutaredoxin Xdur_018680 PF02645 Uncharacterised protein, DegV family COG1307 Xdur_018685 PF01327 Polypeptide deformylase Xdur_018690 PF03960 ArsC family Xdur_018705 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) Xdur_018710 PF01270 Glycosyl hydrolases family 8 Xdur_018715 PF03170 Bacterial cellulose synthase subunit Xdur_018720 PF03552 Cellulose synthase Xdur_018720 PF00535 Glycosyl transferase family 2 Xdur_018720 PF07238 PilZ domain Xdur_018735 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Xdur_018735 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Xdur_018770 PF00593 TonB dependent receptor Xdur_018770 PF07715 TonB-dependent Receptor Plug Domain Xdur_018780 PF00392 Bacterial regulatory proteins, gntR family Xdur_018780 PF07702 UTRA domain Xdur_018800 PF00263 Bacterial type II and III secretion system protein Xdur_018800 PF03958 Bacterial type II/III secretion system short domain Xdur_018810 PF10741 Type II secretion system (T2SS), protein M subtype b Xdur_018815 PF05137 Fimbrial assembly protein (PilN) Xdur_018820 PF03934 Type II secretion system (T2SS), protein K Xdur_018830 PF07963 Prokaryotic N-terminal methylation motif Xdur_018835 PF12019 Type II transport protein GspH Xdur_018840 PF08334 Type II secretion system (T2SS), protein G Xdur_018845 PF00482 Type II secretion system (T2SS), protein F Xdur_018850 PF00437 Type II/IV secretion system protein Xdur_018850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Xdur_018855 PF00082 Subtilase family Xdur_018855 PF04151 Bacterial pre-peptidase C-terminal domain Xdur_018860 PF13018 Extended Signal Peptide of Type V secretion system Xdur_018860 PF03895 YadA-like membrane anchor domain Xdur_018860 PF05658 Head domain of trimeric autotransporter adhesin Xdur_018860 PF05662 Coiled stalk of trimeric autotransporter adhesin Xdur_018865 PF00082 Subtilase family Xdur_018865 PF04151 Bacterial pre-peptidase C-terminal domain Xdur_018870 PF03895 YadA-like membrane anchor domain Xdur_018870 PF05658 Head domain of trimeric autotransporter adhesin Xdur_018870 PF05662 Coiled stalk of trimeric autotransporter adhesin Xdur_018870 PF13018 Extended Signal Peptide of Type V secretion system Xdur_018875 PF02769 AIR synthase related protein, C-terminal domain Xdur_018875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Xdur_018875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Xdur_018880 PF13098 Thioredoxin-like domain Xdur_018880 PF10411 Disulfide bond isomerase protein N-terminus Xdur_018885 PF02899 Phage integrase, N-terminal SAM-like domain Xdur_018885 PF00589 Phage integrase family Xdur_018900 PF03739 Lipopolysaccharide export system permease LptF/LptG Xdur_018910 PF00883 Cytosol aminopeptidase family, catalytic domain Xdur_018910 PF02789 Cytosol aminopeptidase family, N-terminal domain Xdur_018925 PF08264 Anticodon-binding domain of tRNA Xdur_018925 PF00133 tRNA synthetases class I (I, L, M and V) Xdur_018925 PF10458 Valyl tRNA synthetase tRNA binding arm Xdur_018930 PF07715 TonB-dependent Receptor Plug Domain Xdur_018930 PF00593 TonB dependent receptor Xdur_018935 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Xdur_018935 PF01464 Transglycosylase SLT domain Xdur_018940 PF00544 Pectate lyase Xdur_018955 PF01066 CDP-alcohol phosphatidyltransferase Xdur_018965 PF04073 Aminoacyl-tRNA editing domain Xdur_018965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Xdur_018965 PF03129 Anticodon binding domain Xdur_018970 PF00816 H-NS histone family Xdur_018980 PF02405 Permease MlaE Xdur_018985 PF00005 ABC transporter Xdur_018990 PF03886 ABC-type transport auxiliary lipoprotein component Xdur_018990 PF02470 MlaD protein Xdur_019010 PF14307 Glycosyltransferase WbsX Xdur_019010 PF05045 Rhamnan synthesis protein F Xdur_019015 PF01144 Coenzyme A transferase Xdur_019020 PF01144 Coenzyme A transferase Xdur_019025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Xdur_019025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Xdur_019025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Xdur_019025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Xdur_019030 PF01050 Mannose-6-phosphate isomerase Xdur_019030 PF00483 Nucleotidyl transferase Xdur_019035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Xdur_019035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Xdur_019035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Xdur_019040 PF04321 RmlD substrate binding domain Xdur_019045 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Xdur_019050 PF00483 Nucleotidyl transferase Xdur_019055 PF16363 GDP-mannose 4,6 dehydratase Xdur_019060 PF01012 Electron transfer flavoprotein domain Xdur_019065 PF00766 Electron transfer flavoprotein FAD-binding domain Xdur_019065 PF01012 Electron transfer flavoprotein domain Xdur_019075 PF01040 UbiA prenyltransferase family Xdur_019080 PF01565 FAD binding domain Xdur_019080 PF04030 D-arabinono-1,4-lactone oxidase Xdur_019085 PF00106 short chain dehydrogenase Xdur_019095 PF01370 NAD dependent epimerase/dehydratase family Xdur_019100 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_019100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Xdur_019115 PF01209 ubiE/COQ5 methyltransferase family Xdur_019125 PF14307 Glycosyltransferase WbsX Xdur_019125 PF05045 Rhamnan synthesis protein F Xdur_019130 PF00535 Glycosyl transferase family 2 Xdur_019135 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_019140 PF00005 ABC transporter Xdur_019150 PF01053 Cys/Met metabolism PLP-dependent enzyme Xdur_019155 PF00291 Pyridoxal-phosphate dependent enzyme Xdur_019155 PF00571 CBS domain Xdur_019175 PF00437 Type II/IV secretion system protein Xdur_019180 PF02798 Glutathione S-transferase, N-terminal domain Xdur_019180 PF14497 Glutathione S-transferase, C-terminal domain Xdur_019190 PF00270 DEAD/DEAH box helicase Xdur_019190 PF00271 Helicase conserved C-terminal domain Xdur_019200 PF07715 TonB-dependent Receptor Plug Domain Xdur_019200 PF00593 TonB dependent receptor Xdur_019205 PF01242 6-pyruvoyl tetrahydropterin synthase Xdur_019220 PF13185 GAF domain Xdur_019225 PF00756 Putative esterase Xdur_019230 PF07715 TonB-dependent Receptor Plug Domain Xdur_019230 PF00593 TonB dependent receptor Xdur_019235 PF13419 Haloacid dehalogenase-like hydrolase Xdur_019240 PF00817 impB/mucB/samB family Xdur_019240 PF11799 impB/mucB/samB family C-terminal domain Xdur_019245 PF07977 FabA-like domain Xdur_019250 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_019250 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_019260 PF01432 Peptidase family M3 Xdur_019275 PF07732 Multicopper oxidase Xdur_019275 PF07731 Multicopper oxidase Xdur_019275 PF00394 Multicopper oxidase Xdur_019280 PF05275 Copper resistance protein B precursor (CopB) Xdur_019285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Xdur_019315 PF01380 SIS domain Xdur_019320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_019325 PF02687 FtsX-like permease family Xdur_019325 PF00005 ABC transporter Xdur_019325 PF12704 MacB-like periplasmic core domain Xdur_019330 PF12704 MacB-like periplasmic core domain Xdur_019330 PF02687 FtsX-like permease family Xdur_019335 PF02687 FtsX-like permease family Xdur_019335 PF12704 MacB-like periplasmic core domain Xdur_019345 PF02954 Bacterial regulatory protein, Fis family Xdur_019345 PF00072 Response regulator receiver domain Xdur_019345 PF00158 Sigma-54 interaction domain Xdur_019350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_019350 PF00512 His Kinase A (phospho-acceptor) domain Xdur_019355 PF12804 MobA-like NTP transferase domain Xdur_019355 PF14602 Hexapeptide repeat of succinyl-transferase Xdur_019355 PF00132 Bacterial transferase hexapeptide (six repeats) Xdur_019370 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Xdur_019370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Xdur_019375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Xdur_019375 PF02874 ATP synthase alpha/beta family, beta-barrel domain Xdur_019380 PF00231 ATP synthase Xdur_019385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Xdur_019385 PF00306 ATP synthase alpha/beta chain, C terminal domain Xdur_019385 PF02874 ATP synthase alpha/beta family, beta-barrel domain Xdur_019390 PF00213 ATP synthase delta (OSCP) subunit Xdur_019395 PF00430 ATP synthase B/B' CF(0) Xdur_019400 PF00137 ATP synthase subunit C Xdur_019405 PF00119 ATP synthase A chain Xdur_019425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Xdur_019425 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_019435 PF02817 e3 binding domain Xdur_019435 PF00364 Biotin-requiring enzyme Xdur_019435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Xdur_019470 PF03180 NLPA lipoprotein Xdur_019475 PF00528 Binding-protein-dependent transport system inner membrane component Xdur_019480 PF00005 ABC transporter Xdur_019480 PF09383 NIL domain Xdur_019485 PF00892 EamA-like transporter family Xdur_019490 PF04461 Protein of unknown function (DUF520) Xdur_019500 PF00072 Response regulator receiver domain Xdur_019500 PF00989 PAS fold Xdur_019500 PF00512 His Kinase A (phospho-acceptor) domain Xdur_019500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_019500 PF18415 Histidine kinase receptor ArcB trans-membrane domain Xdur_019500 PF01627 Hpt domain Xdur_019520 PF13419 Haloacid dehalogenase-like hydrolase Xdur_019525 PF00849 RNA pseudouridylate synthase Xdur_019525 PF01479 S4 domain Xdur_019530 PF05175 Methyltransferase small domain Xdur_019530 PF08468 Methyltransferase small domain N-terminal Xdur_019540 PF07995 Glucose / Sorbosone dehydrogenase Xdur_019550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_019550 PF00512 His Kinase A (phospho-acceptor) domain Xdur_019550 PF00989 PAS fold Xdur_019570 PF01168 Alanine racemase, N-terminal domain Xdur_019570 PF00842 Alanine racemase, C-terminal domain Xdur_019575 PF01266 FAD dependent oxidoreductase Xdur_019580 PF01037 Lrp/AsnC ligand binding domain Xdur_019590 PF01641 SelR domain Xdur_019605 PF01618 MotA/TolQ/ExbB proton channel family Xdur_019610 PF13677 Membrane MotB of proton-channel complex MotA/MotB Xdur_019610 PF00691 OmpA family Xdur_019635 PF01061 ABC-2 type transporter Xdur_019640 PF00005 ABC transporter Xdur_019645 PF00999 Sodium/hydrogen exchanger family Xdur_019650 PF02469 Fasciclin domain Xdur_019655 PF03167 Uracil DNA glycosylase superfamily Xdur_019665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Xdur_019675 PF03466 LysR substrate binding domain Xdur_019675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_019680 PF03358 NADPH-dependent FMN reductase Xdur_019685 PF00248 Aldo/keto reductase family Xdur_019695 PF01431 Peptidase family M13 Xdur_019695 PF05649 Peptidase family M13 Xdur_019715 PF13520 Amino acid permease Xdur_019725 PF00072 Response regulator receiver domain Xdur_019725 PF04397 LytTr DNA-binding domain Xdur_019730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_019730 PF00672 HAMP domain Xdur_019730 PF02743 Cache domain Xdur_019730 PF06580 Histidine kinase Xdur_019745 PF05974 Domain of unknown function (DUF892) Xdur_019750 PF05067 Manganese containing catalase Xdur_019770 PF01339 CheB methylesterase Xdur_019770 PF01739 CheR methyltransferase, SAM binding domain Xdur_019770 PF08448 PAS fold Xdur_019770 PF03705 CheR methyltransferase, all-alpha domain Xdur_019785 PF00072 Response regulator receiver domain Xdur_019785 PF00158 Sigma-54 interaction domain Xdur_019785 PF02954 Bacterial regulatory protein, Fis family Xdur_019795 PF01654 Cytochrome bd terminal oxidase subunit I Xdur_019800 PF02322 Cytochrome bd terminal oxidase subunit II Xdur_019820 PF16363 GDP-mannose 4,6 dehydratase Xdur_019830 PF03275 UDP-galactopyranose mutase Xdur_019840 PF00005 ABC transporter Xdur_019840 PF00664 ABC transporter transmembrane region Xdur_019855 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_019855 PF00107 Zinc-binding dehydrogenase Xdur_019855 PF13823 Alcohol dehydrogenase GroES-associated Xdur_019900 PF00593 TonB dependent receptor Xdur_019900 PF07715 TonB-dependent Receptor Plug Domain Xdur_019915 PF00005 ABC transporter Xdur_019925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_019925 PF03466 LysR substrate binding domain Xdur_019930 PF01042 Endoribonuclease L-PSP Xdur_019945 PF00672 HAMP domain Xdur_019945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Xdur_019945 PF02203 Tar ligand binding domain homologue Xdur_019960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_019960 PF03466 LysR substrate binding domain Xdur_019965 PF02525 Flavodoxin-like fold Xdur_020010 PF00557 Metallopeptidase family M24 Xdur_020045 PF00717 Peptidase S24-like Xdur_020050 PF13438 Domain of unknown function (DUF4113) Xdur_020050 PF00817 impB/mucB/samB family Xdur_020050 PF11799 impB/mucB/samB family C-terminal domain Xdur_020050 PF11798 IMS family HHH motif Xdur_020070 PF01555 DNA methylase Xdur_020125 PF00182 Chitinase class I Xdur_020310 PF04539 Sigma-70 region 3 Xdur_020310 PF04545 Sigma-70, region 4 Xdur_020310 PF04546 Sigma-70, non-essential region Xdur_020310 PF03979 Sigma-70 factor, region 1.1 Xdur_020310 PF04542 Sigma-70 region 2 Xdur_020310 PF00140 Sigma-70 factor, region 1.2 Xdur_020315 PF02580 D-Tyr-tRNA(Tyr) deacylase Xdur_020320 PF03279 Bacterial lipid A biosynthesis acyltransferase Xdur_020335 PF00925 GTP cyclohydrolase II Xdur_020355 PF00535 Glycosyl transferase family 2 Xdur_020370 PF01189 16S rRNA methyltransferase RsmB/F Xdur_020370 PF01029 NusB family Xdur_020375 PF02911 Formyl transferase, C-terminal domain Xdur_020375 PF00551 Formyl transferase Xdur_020380 PF01327 Polypeptide deformylase Xdur_020385 PF01476 LysM domain Xdur_020390 PF02481 DNA recombination-mediator protein A Xdur_020390 PF17782 DprA winged helix domain Xdur_020395 PF04361 Protein of unknown function (DUF494) Xdur_020400 PF00114 Pilin (bacterial filament) Xdur_020400 PF07963 Prokaryotic N-terminal methylation motif Xdur_020410 PF01131 DNA topoisomerase Xdur_020410 PF01751 Toprim domain Xdur_020410 PF13368 Topoisomerase C-terminal repeat Xdur_020415 PF01300 Telomere recombination Xdur_020440 PF01343 Peptidase family S49 Xdur_020445 PF01554 MatE Xdur_020465 PF00270 DEAD/DEAH box helicase Xdur_020465 PF00271 Helicase conserved C-terminal domain Xdur_020465 PF17764 3′ DNA-binding domain (3′BD) Xdur_020465 PF18074 Primosomal protein N C-terminal domain Xdur_020465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Xdur_020470 PF13417 Glutathione S-transferase, N-terminal domain Xdur_020470 PF00043 Glutathione S-transferase, C-terminal domain Xdur_020485 PF07992 Pyridine nucleotide-disulphide oxidoreductase Xdur_020490 PF03458 UPF0126 domain Xdur_020495 PF04542 Sigma-70 region 2 Xdur_020495 PF04545 Sigma-70, region 4 Xdur_020500 PF03167 Uracil DNA glycosylase superfamily Xdur_020505 PF01339 CheB methylesterase Xdur_020505 PF00072 Response regulator receiver domain Xdur_020510 PF18075 FtsX extracellular domain Xdur_020515 PF00005 ABC transporter Xdur_020520 PF00270 DEAD/DEAH box helicase Xdur_020520 PF00271 Helicase conserved C-terminal domain Xdur_020520 PF12300 ATP-dependent RNA helicase RhlB Xdur_020525 PF00085 Thioredoxin Xdur_020530 PF07497 Rho termination factor, RNA-binding domain Xdur_020530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Xdur_020530 PF07498 Rho termination factor, N-terminal domain Xdur_020535 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Xdur_020540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_020540 PF03466 LysR substrate binding domain Xdur_020550 PF03971 Monomeric isocitrate dehydrogenase Xdur_020565 PF09704 CRISPR-associated protein (Cas_Cas5) Xdur_020585 PF01867 CRISPR associated protein Cas1 Xdur_020590 PF09827 CRISPR associated protein Cas2 Xdur_020600 PF04972 BON domain Xdur_020600 PF01476 LysM domain Xdur_020605 PF14489 QueF-like protein Xdur_020605 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Xdur_020610 PF07687 Peptidase dimerisation domain Xdur_020610 PF01546 Peptidase family M20/M25/M40 Xdur_020615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_020620 PF00873 AcrB/AcrD/AcrF family Xdur_020625 PF00873 AcrB/AcrD/AcrF family Xdur_020630 PF07063 Domain of unknown function (DUF1338) Xdur_020670 PF01427 D-ala-D-ala dipeptidase Xdur_020675 PF01510 N-acetylmuramoyl-L-alanine amidase Xdur_020685 PF13378 Enolase C-terminal domain-like Xdur_020685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Xdur_020695 PF13520 Amino acid permease Xdur_020710 PF05360 yiaA/B two helix domain Xdur_020715 PF07995 Glucose / Sorbosone dehydrogenase Xdur_020720 PF14310 Fibronectin type III-like domain Xdur_020720 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_020720 PF01915 Glycosyl hydrolase family 3 C-terminal domain Xdur_020725 PF02152 Dihydroneopterin aldolase Xdur_020730 PF00814 Glycoprotease family Xdur_020735 PF01165 Ribosomal protein S21 Xdur_020740 PF09424 Yqey-like protein Xdur_020745 PF03631 Virulence factor BrkB Xdur_020750 PF01807 CHC2 zinc finger Xdur_020750 PF08278 DNA primase DnaG DnaB-binding Xdur_020750 PF08275 DNA primase catalytic core, N-terminal domain Xdur_020750 PF10410 DnaB-helicase binding domain of primase Xdur_020755 PF13593 SBF-like CPA transporter family (DUF4137) Xdur_020765 PF01040 UbiA prenyltransferase family Xdur_020790 PF00510 Cytochrome c oxidase subunit III Xdur_020795 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Xdur_020805 PF00115 Cytochrome C and Quinol oxidase polypeptide I Xdur_020810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Xdur_020810 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Xdur_020820 PF00171 Aldehyde dehydrogenase family Xdur_020820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Xdur_020820 PF14850 DNA-binding domain of Proline dehydrogenase Xdur_020820 PF01619 Proline dehydrogenase Xdur_020850 PF00579 tRNA synthetases class I (W and Y) Xdur_020855 PF01551 Peptidase family M23 Xdur_020855 PF04225 Opacity-associated protein A LysM-like domain Xdur_020860 PF03702 Anhydro-N-acetylmuramic acid kinase Xdur_020870 PF07690 Major Facilitator Superfamily Xdur_020875 PF03372 Endonuclease/Exonuclease/phosphatase family Xdur_020880 PF00156 Phosphoribosyl transferase domain Xdur_020890 PF13614 AAA domain Xdur_020895 PF02195 ParB-like nuclease domain Xdur_020895 PF17762 HTH domain found in ParB protein Xdur_020905 PF01370 NAD dependent epimerase/dehydratase family Xdur_020910 PF00535 Glycosyl transferase family 2 Xdur_020925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Xdur_020925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Xdur_020925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Xdur_020925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Xdur_020930 PF00692 dUTPase Xdur_020935 PF04127 DNA / pantothenate metabolism flavoprotein Xdur_020935 PF02441 Flavoprotein Xdur_020940 PF04002 RadC-like JAB domain Xdur_020945 PF00750 tRNA synthetases class I (R) Xdur_020945 PF03485 Arginyl tRNA synthetase N terminal domain Xdur_020945 PF05746 DALR anticodon binding domain Xdur_020960 PF00106 short chain dehydrogenase Xdur_020965 PF01757 Acyltransferase family Xdur_020970 PF03033 Glycosyltransferase family 28 N-terminal domain Xdur_020975 PF13193 AMP-binding enzyme C-terminal domain Xdur_020975 PF00975 Thioesterase domain Xdur_020975 PF00550 Phosphopantetheine attachment site Xdur_020975 PF00668 Condensation domain Xdur_020975 PF00501 AMP-binding enzyme Xdur_020980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Xdur_020980 PF17944 Arginine decarboxylase C-terminal helical extension Xdur_020980 PF17810 Arginine decarboxylase helical bundle domain Xdur_020985 PF17284 Spermidine synthase tetramerisation domain Xdur_021010 PF00543 Nitrogen regulatory protein P-II Xdur_021015 PF04380 Membrane fusogenic activity Xdur_021020 PF01078 Magnesium chelatase, subunit ChlI Xdur_021020 PF13335 Magnesium chelatase, subunit ChlI C-terminal Xdur_021035 PF12792 CSS motif domain associated with EAL Xdur_021035 PF00563 EAL domain Xdur_021040 PF00487 Fatty acid desaturase Xdur_021045 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_021045 PF00175 Oxidoreductase NAD-binding domain Xdur_021045 PF00970 Oxidoreductase FAD-binding domain Xdur_021050 PF00440 Bacterial regulatory proteins, tetR family Xdur_021060 PF01139 tRNA-splicing ligase RtcB Xdur_021100 PF08338 Domain of unknown function (DUF1731) Xdur_021100 PF01370 NAD dependent epimerase/dehydratase family Xdur_021105 PF00072 Response regulator receiver domain Xdur_021105 PF00486 Transcriptional regulatory protein, C terminal Xdur_021110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_021110 PF08521 Two-component sensor kinase N-terminal Xdur_021110 PF00512 His Kinase A (phospho-acceptor) domain Xdur_021135 PF00595 PDZ domain Xdur_021155 PF01594 AI-2E family transporter Xdur_021160 PF13419 Haloacid dehalogenase-like hydrolase Xdur_021165 PF00883 Cytosol aminopeptidase family, catalytic domain Xdur_021165 PF02789 Cytosol aminopeptidase family, N-terminal domain Xdur_021175 PF04542 Sigma-70 region 2 Xdur_021175 PF08281 Sigma-70, region 4 Xdur_021180 PF00199 Catalase Xdur_021195 PF00196 Bacterial regulatory proteins, luxR family Xdur_021195 PF00072 Response regulator receiver domain Xdur_021200 PF07730 Histidine kinase Xdur_021205 PF13533 Biotin-lipoyl like Xdur_021210 PF00005 ABC transporter Xdur_021230 PF00892 EamA-like transporter family Xdur_021235 PF00892 EamA-like transporter family Xdur_021250 PF00753 Metallo-beta-lactamase superfamily Xdur_021255 PF00579 tRNA synthetases class I (W and Y) Xdur_021275 PF00491 Arginase family Xdur_021300 PF02223 Thymidylate kinase Xdur_021315 PF03309 Type III pantothenate kinase Xdur_021320 PF08279 HTH domain Xdur_021320 PF03099 Biotin/lipoate A/B protein ligase family Xdur_021320 PF02237 Biotin protein ligase C terminal domain Xdur_021330 PF06167 Glucose-regulated metallo-peptidase M90 Xdur_021345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_021350 PF00486 Transcriptional regulatory protein, C terminal Xdur_021350 PF00072 Response regulator receiver domain Xdur_021360 PF01207 Dihydrouridine synthase (Dus) Xdur_021375 PF00199 Catalase Xdur_021375 PF06628 Catalase-related immune-responsive Xdur_021380 PF06733 DEAD_2 Xdur_021380 PF13307 Helicase C-terminal domain Xdur_021395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Xdur_021395 PF01488 Shikimate / quinate 5-dehydrogenase Xdur_021395 PF08501 Shikimate dehydrogenase substrate binding domain Xdur_021405 PF00667 FAD binding domain Xdur_021405 PF00175 Oxidoreductase NAD-binding domain Xdur_021405 PF00258 Flavodoxin Xdur_021415 PF03466 LysR substrate binding domain Xdur_021415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_021430 PF00490 Delta-aminolevulinic acid dehydratase Xdur_021455 PF00326 Prolyl oligopeptidase family Xdur_021455 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Xdur_021460 PF00043 Glutathione S-transferase, C-terminal domain Xdur_021460 PF02798 Glutathione S-transferase, N-terminal domain Xdur_021480 PF04820 Tryptophan halogenase Xdur_021495 PF00005 ABC transporter Xdur_021505 PF01381 Helix-turn-helix Xdur_021515 PF01229 Glycosyl hydrolases family 39 Xdur_021520 PF02583 Metal-sensitive transcriptional repressor Xdur_021525 PF01545 Cation efflux family Xdur_021525 PF16916 Dimerisation domain of Zinc Transporter Xdur_021535 PF07715 TonB-dependent Receptor Plug Domain Xdur_021535 PF00593 TonB dependent receptor Xdur_021545 PF01965 DJ-1/PfpI family Xdur_021545 PF12833 Helix-turn-helix domain Xdur_021550 PF00970 Oxidoreductase FAD-binding domain Xdur_021550 PF00111 2Fe-2S iron-sulfur cluster binding domain Xdur_021550 PF00175 Oxidoreductase NAD-binding domain Xdur_021555 PF00005 ABC transporter Xdur_021560 PF01061 ABC-2 type transporter Xdur_021570 PF08546 Ketopantoate reductase PanE/ApbA C terminal Xdur_021570 PF02558 Ketopantoate reductase PanE/ApbA Xdur_021605 PF00268 Ribonucleotide reductase, small chain Xdur_021610 PF00317 Ribonucleotide reductase, all-alpha domain Xdur_021610 PF02867 Ribonucleotide reductase, barrel domain Xdur_021610 PF03477 ATP cone domain Xdur_021620 PF13607 Succinyl-CoA ligase like flavodoxin domain Xdur_021620 PF13380 CoA binding domain Xdur_021620 PF00583 Acetyltransferase (GNAT) family Xdur_021625 PF03448 MgtE intracellular N domain Xdur_021625 PF00571 CBS domain Xdur_021625 PF01769 Divalent cation transporter Xdur_021635 PF02254 TrkA-N domain Xdur_021635 PF00999 Sodium/hydrogen exchanger family Xdur_021640 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Xdur_021640 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Xdur_021645 PF00723 Glycosyl hydrolases family 15 Xdur_021660 PF05166 YcgL domain Xdur_021665 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_021665 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_021675 PF00535 Glycosyl transferase family 2 Xdur_021730 PF07977 FabA-like domain Xdur_021735 PF01553 Acyltransferase Xdur_021745 PF00550 Phosphopantetheine attachment site Xdur_021750 PF04820 Tryptophan halogenase Xdur_021770 PF00326 Prolyl oligopeptidase family Xdur_021770 PF07676 WD40-like Beta Propeller Repeat Xdur_021785 PF01218 Coproporphyrinogen III oxidase Xdur_021790 PF01612 3'-5' exonuclease Xdur_021790 PF00476 DNA polymerase family A Xdur_021790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Xdur_021790 PF01367 5'-3' exonuclease, C-terminal SAM fold Xdur_021800 PF06812 ImpA, N-terminal, type VI secretion system Xdur_021830 PF03793 PASTA domain Xdur_021830 PF00069 Protein kinase domain Xdur_021845 PF06761 Intracellular multiplication and human macrophage-killing Xdur_021845 PF06744 Type VI secretion protein IcmF C-terminal Xdur_021845 PF14331 ImcF-related N-terminal domain Xdur_021855 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Xdur_021870 PF04717 Type VI secretion system, phage-baseplate injector Xdur_021885 PF03793 PASTA domain Xdur_021885 PF00069 Protein kinase domain Xdur_021895 PF08281 Sigma-70, region 4 Xdur_021895 PF04542 Sigma-70 region 2 Xdur_021910 PF00328 Histidine phosphatase superfamily (branch 2) Xdur_021950 PF17871 AAA lid domain Xdur_021950 PF10431 C-terminal, D2-small domain, of ClpB protein Xdur_021950 PF00004 ATPase family associated with various cellular activities (AAA) Xdur_021950 PF07724 AAA domain (Cdc48 subfamily) Xdur_021960 PF05947 Type VI secretion system, TssF Xdur_021965 PF04965 Gene 25-like lysozyme Xdur_021970 PF07024 ImpE protein Xdur_021975 PF05638 Type VI secretion system effector, Hcp Xdur_021980 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Xdur_021985 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 Xdur_022000 PF12464 Maltose acetyltransferase Xdur_022000 PF14602 Hexapeptide repeat of succinyl-transferase Xdur_022010 PF13361 UvrD-like helicase C-terminal domain Xdur_022010 PF00580 UvrD/REP helicase N-terminal domain Xdur_022020 PF13396 Phospholipase_D-nuclease N-terminal Xdur_022020 PF13091 PLD-like domain Xdur_022025 PF03466 LysR substrate binding domain Xdur_022025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_022030 PF03737 Aldolase/RraA Xdur_022035 PF04303 PrpF protein Xdur_022040 PF04909 Amidohydrolase Xdur_022045 PF00471 Ribosomal protein L33 Xdur_022050 PF00830 Ribosomal L28 family Xdur_022060 PF13533 Biotin-lipoyl like Xdur_022080 PF02527 rRNA small subunit methyltransferase G Xdur_022085 PF09423 PhoD-like phosphatase Xdur_022085 PF16655 PhoD-like phosphatase, N-terminal domain Xdur_022090 PF09423 PhoD-like phosphatase Xdur_022090 PF16655 PhoD-like phosphatase, N-terminal domain Xdur_022095 PF01648 4'-phosphopantetheinyl transferase superfamily Xdur_022100 PF04226 Transglycosylase associated protein Xdur_022110 PF03372 Endonuclease/Exonuclease/phosphatase family Xdur_022115 PF00480 ROK family Xdur_022125 PF09312 SurA N-terminal domain Xdur_022135 PF00474 Sodium:solute symporter family Xdur_022140 PF04341 Protein of unknown function, DUF485 Xdur_022150 PF13193 AMP-binding enzyme C-terminal domain Xdur_022150 PF16177 Acetyl-coenzyme A synthetase N-terminus Xdur_022150 PF00501 AMP-binding enzyme Xdur_022155 PF00196 Bacterial regulatory proteins, luxR family Xdur_022155 PF00072 Response regulator receiver domain Xdur_022175 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain Xdur_022175 PF04616 Glycosyl hydrolases family 43 Xdur_022185 PF00248 Aldo/keto reductase family Xdur_022200 PF01557 Fumarylacetoacetate (FAA) hydrolase family Xdur_022205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Xdur_022205 PF13378 Enolase C-terminal domain-like Xdur_022210 PF05336 L-rhamnose mutarotase Xdur_022215 PF07690 Major Facilitator Superfamily Xdur_022220 PF01614 Bacterial transcriptional regulator Xdur_022220 PF09339 IclR helix-turn-helix domain Xdur_022225 PF02659 Putative manganese efflux pump Xdur_022230 PF00512 His Kinase A (phospho-acceptor) domain Xdur_022230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_022240 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Xdur_022240 PF06165 Glycosyltransferase family 36 Xdur_022255 PF01011 PQQ enzyme repeat Xdur_022255 PF13360 PQQ-like domain Xdur_022255 PF13570 PQQ-like domain Xdur_022285 PF04357 TamB, inner membrane protein subunit of TAM complex Xdur_022290 PF01103 Surface antigen Xdur_022290 PF17243 POTRA domain TamA domain 1 Xdur_022320 PF05746 DALR anticodon binding domain Xdur_022320 PF02092 Glycyl-tRNA synthetase beta subunit Xdur_022325 PF02091 Glycyl-tRNA synthetase alpha subunit Xdur_022330 PF00437 Type II/IV secretion system protein Xdur_022330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Xdur_022340 PF00958 GMP synthase C terminal domain Xdur_022340 PF00117 Glutamine amidotransferase class-I Xdur_022350 PF00902 Sec-independent protein translocase protein (TatC) Xdur_022355 PF02416 mttA/Hcf106 family Xdur_022360 PF02416 mttA/Hcf106 family Xdur_022370 PF00762 Ferrochelatase Xdur_022375 PF12697 Alpha/beta hydrolase family Xdur_022390 PF04381 Putative exonuclease, RdgC Xdur_022395 PF01171 PP-loop family Xdur_022405 PF00356 Bacterial regulatory proteins, lacI family Xdur_022410 PF07477 Glycosyl hydrolase family 67 C-terminus Xdur_022410 PF03648 Glycosyl hydrolase family 67 N-terminus Xdur_022410 PF07488 Glycosyl hydrolase family 67 middle domain Xdur_022420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Xdur_022420 PF13378 Enolase C-terminal domain-like Xdur_022425 PF04616 Glycosyl hydrolases family 43 Xdur_022425 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain Xdur_022430 PF01915 Glycosyl hydrolase family 3 C-terminal domain Xdur_022430 PF00933 Glycosyl hydrolase family 3 N terminal domain Xdur_022430 PF14310 Fibronectin type III-like domain Xdur_022430 PF07691 PA14 domain Xdur_022435 PF01232 Mannitol dehydrogenase Rossmann domain Xdur_022435 PF08125 Mannitol dehydrogenase C-terminal domain Xdur_022465 PF00171 Aldehyde dehydrogenase family Xdur_022480 PF00202 Aminotransferase class-III Xdur_022490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Xdur_022490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Xdur_022510 PF08450 SMP-30/Gluconolactonase/LRE-like region Xdur_022515 PF00331 Glycosyl hydrolase family 10 Xdur_022520 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Xdur_022520 PF00703 Glycosyl hydrolases family 2 Xdur_022520 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Xdur_022520 PF16355 Domain of unknown function (DUF4982) Xdur_022520 PF02837 Glycosyl hydrolases family 2, sugar binding domain Xdur_022525 PF02614 Glucuronate isomerase Xdur_022530 PF03422 Carbohydrate binding module (family 6) Xdur_022530 PF00331 Glycosyl hydrolase family 10 Xdur_022530 PF00553 Cellulose binding domain Xdur_022540 PF03422 Carbohydrate binding module (family 6) Xdur_022540 PF00553 Cellulose binding domain Xdur_022540 PF00331 Glycosyl hydrolase family 10 Xdur_022560 PF04616 Glycosyl hydrolases family 43 Xdur_022630 PF00698 Acyl transferase domain Xdur_022630 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_022630 PF00107 Zinc-binding dehydrogenase Xdur_022630 PF16197 Ketoacyl-synthetase C-terminal extension Xdur_022630 PF00109 Beta-ketoacyl synthase, N-terminal domain Xdur_022630 PF02801 Beta-ketoacyl synthase, C-terminal domain Xdur_022630 PF00550 Phosphopantetheine attachment site Xdur_022630 PF14765 Polyketide synthase dehydratase Xdur_022630 PF08659 KR domain Xdur_022635 PF01553 Acyltransferase Xdur_022645 PF00356 Bacterial regulatory proteins, lacI family Xdur_022660 PF04820 Tryptophan halogenase Xdur_022665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Xdur_022670 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) Xdur_022675 PF04337 Protein of unknown function, DUF480 Xdur_022690 PF13361 UvrD-like helicase C-terminal domain Xdur_022690 PF00580 UvrD/REP helicase N-terminal domain Xdur_022695 PF00265 Thymidine kinase Xdur_022700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_022700 PF01590 GAF domain Xdur_022700 PF00360 Phytochrome region Xdur_022700 PF08446 PAS fold Xdur_022700 PF00512 His Kinase A (phospho-acceptor) domain Xdur_022705 PF04349 Periplasmic glucan biosynthesis protein, MdoG Xdur_022715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Xdur_022715 PF06827 Zinc finger found in FPG and IleRS Xdur_022715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Xdur_022745 PF03594 Benzoate membrane transport protein Xdur_022750 PF13426 PAS domain Xdur_022750 PF00360 Phytochrome region Xdur_022750 PF01590 GAF domain Xdur_022750 PF08446 PAS fold Xdur_022755 PF01126 Heme oxygenase Xdur_022760 PF07690 Major Facilitator Superfamily Xdur_022765 PF01263 Aldose 1-epimerase Xdur_022775 PF02810 SEC-C motif Xdur_022780 PF01925 Sulfite exporter TauE/SafE Xdur_022800 PF01227 GTP cyclohydrolase I Xdur_022810 PF07869 Protein of unknown function (DUF1656) Xdur_022815 PF00529 HlyD membrane-fusion protein of T1SS Xdur_022815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Xdur_022820 PF02321 Outer membrane efflux protein Xdur_022825 PF04632 Fusaric acid resistance protein family Xdur_022830 PF00083 Sugar (and other) transporter Xdur_022840 PF13396 Phospholipase_D-nuclease N-terminal Xdur_022840 PF13091 PLD-like domain Xdur_022865 PF01850 PIN domain Xdur_022900 PF00849 RNA pseudouridylate synthase Xdur_022950 PF13538 UvrD-like helicase C-terminal domain Xdur_022955 PF13361 UvrD-like helicase C-terminal domain Xdur_022955 PF00580 UvrD/REP helicase N-terminal domain Xdur_022955 PF12705 PD-(D/E)XK nuclease superfamily Xdur_022960 PF17946 RecC C-terminal domain Xdur_022975 PF00005 ABC transporter Xdur_022980 PF02405 Permease MlaE Xdur_022985 PF02470 MlaD protein Xdur_022990 PF05494 MlaC protein Xdur_023000 PF04333 MlaA lipoprotein Xdur_023010 PF00255 Glutathione peroxidase Xdur_023020 PF02646 RmuC family Xdur_023025 PF08240 Alcohol dehydrogenase GroES-like domain Xdur_023025 PF00107 Zinc-binding dehydrogenase Xdur_023030 PF03466 LysR substrate binding domain Xdur_023030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Xdur_023040 PF13417 Glutathione S-transferase, N-terminal domain Xdur_023040 PF00043 Glutathione S-transferase, C-terminal domain Xdur_023050 PF13520 Amino acid permease Xdur_023055 PF07971 Glycosyl hydrolase family 92 Xdur_023055 PF17678 Glycosyl hydrolase family 92 N-terminal domain Xdur_023060 PF10947 Protein of unknown function (DUF2628) Xdur_023065 PF00990 Diguanylate cyclase, GGDEF domain Xdur_023070 PF17853 GGDEF-like domain Xdur_023070 PF05651 Putative sugar diacid recognition Xdur_023070 PF13556 PucR C-terminal helix-turn-helix domain Xdur_023075 PF02595 Glycerate kinase family Xdur_023080 PF07690 Major Facilitator Superfamily Xdur_023095 PF17785 PUA-like domain Xdur_023095 PF10672 S-adenosylmethionine-dependent methyltransferase Xdur_023100 PF03741 Integral membrane protein TerC family Xdur_023105 PF01694 Rhomboid family Xdur_023110 PF03009 Glycerophosphoryl diester phosphodiesterase family Xdur_023120 PF01569 PAP2 superfamily Xdur_023125 PF10396 GTP-binding protein TrmE N-terminus Xdur_023125 PF12631 MnmE helical domain Xdur_023125 PF01926 50S ribosome-binding GTPase Xdur_023130 PF01522 Polysaccharide deacetylase Xdur_023135 PF14849 YidC periplasmic domain Xdur_023135 PF02096 60Kd inner membrane protein Xdur_023140 PF00825 Ribonuclease P Xdur_023145 PF00468 Ribosomal protein L34 Xdur_023155 PF03377 TAL effector repeat Xdur_023180 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Xdur_023190 PF00239 Resolvase, N terminal domain Xdur_023190 PF02796 Helix-turn-helix domain of resolvase Xdur_023200 PF01526 Tn3 transposase DDE domain Xdur_023200 PF13700 Domain of unknown function (DUF4158) Xdur_023265 PF11740 Plasmid replication region DNA-binding N-term Xdur_023270 PF10609 NUBPL iron-transfer P-loop NTPase Xdur_023305 PF02534 Type IV secretory system Conjugative DNA transfer Xdur_023310 PF18272 single-stranded DNA binding TraI N-terminal subdomain Xdur_023310 PF18340 DNA relaxase TraI 2B/2B-like domain Xdur_023310 PF08751 TrwC relaxase Xdur_023310 PF07057 DNA helicase TraI Xdur_023325 PF00437 Type II/IV secretion system protein Xdur_023330 PF03743 Bacterial conjugation TrbI-like protein Xdur_023335 PF03524 Conjugal transfer protein Xdur_023340 PF04335 VirB8 protein Xdur_023365 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_023370 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_023390 PF01464 Transglycosylase SLT domain Xdur_023400 PF00486 Transcriptional regulatory protein, C terminal Xdur_023400 PF00072 Response regulator receiver domain Xdur_023405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Xdur_023405 PF00512 His Kinase A (phospho-acceptor) domain Xdur_023405 PF09308 LuxQ, periplasmic Xdur_023405 PF00072 Response regulator receiver domain Xdur_023415 PF00196 Bacterial regulatory proteins, luxR family Xdur_023415 PF00072 Response regulator receiver domain Xdur_023480 PF13700 Domain of unknown function (DUF4158) Xdur_023480 PF01526 Tn3 transposase DDE domain Xdur_023495 PF00239 Resolvase, N terminal domain Xdur_023495 PF02796 Helix-turn-helix domain of resolvase Xdur_023540 PF07015 VirC1 protein Xdur_023590 PF01464 Transglycosylase SLT domain Xdur_023595 PF01131 DNA topoisomerase Xdur_023595 PF01751 Toprim domain Xdur_023595 PF01396 Topoisomerase DNA binding C4 zinc finger Xdur_023600 PF04956 TrbC/VIRB2 family Xdur_023605 PF05101 Type IV secretory pathway, VirB3-like protein Xdur_023610 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_023615 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_023620 PF07996 Type IV secretion system proteins Xdur_023630 PF04610 TrbL/VirB6 plasmid conjugal transfer protein Xdur_023635 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Xdur_023640 PF04335 VirB8 protein Xdur_023645 PF03524 Conjugal transfer protein Xdur_023650 PF03743 Bacterial conjugation TrbI-like protein Xdur_023655 PF00437 Type II/IV secretion system protein Xdur_023660 PF02534 Type IV secretory system Conjugative DNA transfer Xdur_023695 PF02195 ParB-like nuclease domain Xdur_023700 PF13614 AAA domain Xdur_023770 PF01936 NYN domain Xdur_023770 PF09722 Protein of unknown function (DUF2384) Xdur_023775 PF13614 AAA domain Xdur_023780 PF02796 Helix-turn-helix domain of resolvase Xdur_023780 PF00239 Resolvase, N terminal domain Xdur_023790 PF02810 SEC-C motif Xdur_023790 PF03695 Uncharacterised protein family (UPF0149) Xdur_023795 PF03377 TAL effector repeat Xdur_023800 PF13700 Domain of unknown function (DUF4158) Xdur_023800 PF01526 Tn3 transposase DDE domain Xdur_023835 PF17841 BID domain of Bartonella effector protein (Bep) Xdur_023835 PF02661 Fic/DOC family Xdur_023850 PF03377 TAL effector repeat Xdur_023870 PF03743 Bacterial conjugation TrbI-like protein Xdur_023885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein Xdur_023900 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Xdur_023910 PF04956 TrbC/VIRB2 family Xdur_023915 PF00437 Type II/IV secretion system protein Xdur_023985 PF01883 Iron-sulfur cluster assembly protein Xdur_023985 PF10609 NUBPL iron-transfer P-loop NTPase Xdur_024085 PF01131 DNA topoisomerase Xdur_024085 PF01751 Toprim domain Xdur_024095 PF13614 AAA domain Xdur_024100 PF08535 KorB domain Xdur_024100 PF02195 ParB-like nuclease domain Xdur_024100 PF06613 KorB C-terminal beta-barrel domain Xdur_024145 PF13406 Transglycosylase SLT domain Xdur_024150 PF01526 Tn3 transposase DDE domain Xdur_024150 PF13700 Domain of unknown function (DUF4158) Xdur_024185 PF00239 Resolvase, N terminal domain Xdur_024185 PF02796 Helix-turn-helix domain of resolvase Xdur_024200 PF13700 Domain of unknown function (DUF4158) Xdur_024200 PF01526 Tn3 transposase DDE domain Xdur_024205 PF02810 SEC-C motif Xdur_024205 PF03695 Uncharacterised protein family (UPF0149) Xdur_024215 PF03377 TAL effector repeat Xdur_024225 PF00239 Resolvase, N terminal domain Xdur_024225 PF02796 Helix-turn-helix domain of resolvase Xdur_024230 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin