locus-tag class description J4T80_00005 PF00308 Bacterial dnaA protein J4T80_00005 PF08299 Bacterial dnaA protein helix-turn-helix J4T80_00005 PF11638 DnaA N-terminal domain J4T80_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4T80_00010 PF02767 DNA polymerase III beta subunit, central domain J4T80_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4T80_00015 PF02463 RecF/RecN/SMC N terminal domain J4T80_00020 PF00204 DNA gyrase B J4T80_00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4T80_00020 PF18053 DNA gyrase B subunit insert domain J4T80_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_00020 PF01751 Toprim domain J4T80_00030 PF01435 Peptidase family M48 J4T80_00040 PF03544 Gram-negative bacterial TonB protein C-terminal J4T80_00045 PF01618 MotA/TolQ/ExbB proton channel family J4T80_00050 PF02472 Biopolymer transport protein ExbD/TolR J4T80_00055 PF02472 Biopolymer transport protein ExbD/TolR J4T80_00060 PF02472 Biopolymer transport protein ExbD/TolR J4T80_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4T80_00075 PF13091 PLD-like domain J4T80_00075 PF13396 Phospholipase_D-nuclease N-terminal J4T80_00090 PF04055 Radical SAM superfamily J4T80_00100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4T80_00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4T80_00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4T80_00120 PF13180 PDZ domain J4T80_00120 PF03572 Peptidase family S41 J4T80_00125 PF01551 Peptidase family M23 J4T80_00135 PF04389 Peptidase family M28 J4T80_00145 PF00150 Cellulase (glycosyl hydrolase family 5) J4T80_00150 PF00150 Cellulase (glycosyl hydrolase family 5) J4T80_00160 PF00150 Cellulase (glycosyl hydrolase family 5) J4T80_00165 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_00165 PF00107 Zinc-binding dehydrogenase J4T80_00170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4T80_00170 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_00175 PF00310 Glutamine amidotransferases class-II J4T80_00175 PF04898 Glutamate synthase central domain J4T80_00175 PF01645 Conserved region in glutamate synthase J4T80_00175 PF01493 GXGXG motif J4T80_00215 PF00872 Transposase, Mutator family J4T80_00255 PF09369 Domain of unknown function (DUF1998) J4T80_00255 PF00271 Helicase conserved C-terminal domain J4T80_00255 PF00270 DEAD/DEAH box helicase J4T80_00260 PF03006 Haemolysin-III related J4T80_00285 PF01609 Transposase DDE domain J4T80_00285 PF05598 Transposase domain (DUF772) J4T80_00300 PF01609 Transposase DDE domain J4T80_00300 PF05598 Transposase domain (DUF772) J4T80_00325 PF12867 DinB superfamily J4T80_00325 PF03781 Sulfatase-modifying factor enzyme 1 J4T80_00335 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_00340 PF00005 ABC transporter J4T80_00340 PF00571 CBS domain J4T80_00355 PF00005 ABC transporter J4T80_00365 PF01734 Patatin-like phospholipase J4T80_00370 PF00593 TonB dependent receptor J4T80_00370 PF07660 Secretin and TonB N terminus short domain J4T80_00370 PF07715 TonB-dependent Receptor Plug Domain J4T80_00375 PF01037 Lrp/AsnC ligand binding domain J4T80_00380 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4T80_00390 PF00657 GDSL-like Lipase/Acylhydrolase J4T80_00405 PF04962 KduI/IolB family J4T80_00410 PF00356 Bacterial regulatory proteins, lacI family J4T80_00415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J4T80_00415 PF04616 Glycosyl hydrolases family 43 J4T80_00420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4T80_00430 PF03480 Bacterial extracellular solute-binding protein, family 7 J4T80_00440 PF07859 alpha/beta hydrolase fold J4T80_00440 PF13472 GDSL-like Lipase/Acylhydrolase family J4T80_00445 PF00135 Carboxylesterase family J4T80_00450 PF00248 Aldo/keto reductase family J4T80_00460 PF00128 Alpha amylase, catalytic domain J4T80_00460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4T80_00460 PF02806 Alpha amylase, C-terminal all-beta domain J4T80_00465 PF16657 Maltogenic Amylase, C-terminal domain J4T80_00465 PF00128 Alpha amylase, catalytic domain J4T80_00470 PF11896 Domain of unknown function (DUF3416) J4T80_00470 PF00128 Alpha amylase, catalytic domain J4T80_00485 PF01609 Transposase DDE domain J4T80_00485 PF05598 Transposase domain (DUF772) J4T80_00495 PF05598 Transposase domain (DUF772) J4T80_00495 PF01609 Transposase DDE domain J4T80_00515 PF00872 Transposase, Mutator family J4T80_00530 PF00294 pfkB family carbohydrate kinase J4T80_00540 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4T80_00540 PF07055 Enoyl reductase FAD binding domain J4T80_00540 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4T80_00545 PF00486 Transcriptional regulatory protein, C terminal J4T80_00545 PF18500 CadC C-terminal domain 1 J4T80_00565 PF00072 Response regulator receiver domain J4T80_00565 PF00196 Bacterial regulatory proteins, luxR family J4T80_00570 PF07730 Histidine kinase J4T80_00580 PF01070 FMN-dependent dehydrogenase J4T80_00585 PF02735 Ku70/Ku80 beta-barrel domain J4T80_00605 PF00171 Aldehyde dehydrogenase family J4T80_00620 PF00593 TonB dependent receptor J4T80_00620 PF07715 TonB-dependent Receptor Plug Domain J4T80_00625 PF00155 Aminotransferase class I and II J4T80_00630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4T80_00660 PF07726 ATPase family associated with various cellular activities (AAA) J4T80_00660 PF17863 AAA lid domain J4T80_00700 PF08946 Osmosensory transporter coiled coil J4T80_00700 PF00083 Sugar (and other) transporter J4T80_00705 PF00085 Thioredoxin J4T80_00720 PF00293 NUDIX domain J4T80_00720 PF13344 Haloacid dehalogenase-like hydrolase J4T80_00730 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4T80_00730 PF16485 Protealysin propeptide J4T80_00730 PF01447 Thermolysin metallopeptidase, catalytic domain J4T80_00750 PF05532 CsbD-like J4T80_00765 PF01609 Transposase DDE domain J4T80_00765 PF05598 Transposase domain (DUF772) J4T80_00770 PF01609 Transposase DDE domain J4T80_00770 PF05598 Transposase domain (DUF772) J4T80_00780 PF01883 Iron-sulfur cluster assembly protein J4T80_00780 PF10609 NUBPL iron-transfer P-loop NTPase J4T80_00795 PF13091 PLD-like domain J4T80_00800 PF03061 Thioesterase superfamily J4T80_00830 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_00830 PF00107 Zinc-binding dehydrogenase J4T80_00840 PF02673 Bacitracin resistance protein BacA J4T80_00845 PF03951 Glutamine synthetase, beta-Grasp domain J4T80_00845 PF00120 Glutamine synthetase, catalytic domain J4T80_00850 PF00543 Nitrogen regulatory protein P-II J4T80_00855 PF00909 Ammonium Transporter Family J4T80_00865 PF00989 PAS fold J4T80_00865 PF00512 His Kinase A (phospho-acceptor) domain J4T80_00865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_00870 PF00072 Response regulator receiver domain J4T80_00870 PF00158 Sigma-54 interaction domain J4T80_00870 PF02954 Bacterial regulatory protein, Fis family J4T80_00875 PF00080 Copper/zinc superoxide dismutase (SODC) J4T80_00880 PF00080 Copper/zinc superoxide dismutase (SODC) J4T80_00890 PF01609 Transposase DDE domain J4T80_00890 PF05598 Transposase domain (DUF772) J4T80_00905 PF02803 Thiolase, C-terminal domain J4T80_00905 PF00108 Thiolase, N-terminal domain J4T80_00940 PF00581 Rhodanese-like domain J4T80_00945 PF02556 Preprotein translocase subunit SecB J4T80_00950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4T80_00950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4T80_00965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4T80_00965 PF00205 Thiamine pyrophosphate enzyme, central domain J4T80_00965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4T80_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_00975 PF02954 Bacterial regulatory protein, Fis family J4T80_00975 PF00072 Response regulator receiver domain J4T80_00975 PF00158 Sigma-54 interaction domain J4T80_00990 PF07690 Major Facilitator Superfamily J4T80_00995 PF00588 SpoU rRNA Methylase family J4T80_01010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T80_01010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T80_01020 PF00561 alpha/beta hydrolase fold J4T80_01025 PF03692 Putative zinc- or iron-chelating domain J4T80_01030 PF00501 AMP-binding enzyme J4T80_01035 PF00072 Response regulator receiver domain J4T80_01035 PF00486 Transcriptional regulatory protein, C terminal J4T80_01040 PF00144 Beta-lactamase J4T80_01045 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J4T80_01065 PF03109 ABC1 family J4T80_01075 PF00849 RNA pseudouridylate synthase J4T80_01085 PF00472 RF-1 domain J4T80_01095 PF01112 Asparaginase J4T80_01100 PF01432 Peptidase family M3 J4T80_01105 PF12706 Beta-lactamase superfamily domain J4T80_01130 PF12833 Helix-turn-helix domain J4T80_01135 PF00999 Sodium/hydrogen exchanger family J4T80_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_01140 PF03466 LysR substrate binding domain J4T80_01145 PF01274 Malate synthase J4T80_01150 PF00463 Isocitrate lyase family J4T80_01155 PF00990 Diguanylate cyclase, GGDEF domain J4T80_01175 PF00326 Prolyl oligopeptidase family J4T80_01180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4T80_01180 PF00364 Biotin-requiring enzyme J4T80_01180 PF02785 Biotin carboxylase C-terminal domain J4T80_01180 PF00289 Biotin carboxylase, N-terminal domain J4T80_01180 PF18140 Propionyl-coenzyme A carboxylase BT domain J4T80_01185 PF01039 Carboxyl transferase domain J4T80_01190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_01190 PF02770 Acyl-CoA dehydrogenase, middle domain J4T80_01190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_01245 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4T80_01245 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4T80_01265 PF03969 AFG1-like ATPase J4T80_01270 PF01047 MarR family J4T80_01275 PF02566 OsmC-like protein J4T80_01300 PF00107 Zinc-binding dehydrogenase J4T80_01300 PF16884 N-terminal domain of oxidoreductase J4T80_01305 PF00248 Aldo/keto reductase family J4T80_01315 PF00849 RNA pseudouridylate synthase J4T80_01320 PF00593 TonB dependent receptor J4T80_01330 PF00270 DEAD/DEAH box helicase J4T80_01330 PF04408 Helicase associated domain (HA2) J4T80_01330 PF00271 Helicase conserved C-terminal domain J4T80_01330 PF08482 ATP-dependent helicase C-terminal J4T80_01335 PF07308 Protein of unknown function (DUF1456) J4T80_01340 PF00576 HIUase/Transthyretin family J4T80_01345 PF13454 FAD-NAD(P)-binding J4T80_01350 PF09349 OHCU decarboxylase J4T80_01350 PF01014 Uricase J4T80_01365 PF00266 Aminotransferase class-V J4T80_01370 PF07687 Peptidase dimerisation domain J4T80_01370 PF01546 Peptidase family M20/M25/M40 J4T80_01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_01375 PF03466 LysR substrate binding domain J4T80_01380 PF00561 alpha/beta hydrolase fold J4T80_01395 PF01425 Amidase J4T80_01400 PF01156 Inosine-uridine preferring nucleoside hydrolase J4T80_01410 PF00860 Permease family J4T80_01415 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T80_01420 PF00355 Rieske [2Fe-2S] domain J4T80_01425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_01425 PF03466 LysR substrate binding domain J4T80_01430 PF01026 TatD related DNase J4T80_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_01440 PF03466 LysR substrate binding domain J4T80_01445 PF07690 Major Facilitator Superfamily J4T80_01455 PF00561 alpha/beta hydrolase fold J4T80_01455 PF08386 TAP-like protein J4T80_01460 PF02146 Sir2 family J4T80_01465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4T80_01470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4T80_01470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4T80_01480 PF00551 Formyl transferase J4T80_01485 PF00072 Response regulator receiver domain J4T80_01485 PF00486 Transcriptional regulatory protein, C terminal J4T80_01490 PF00672 HAMP domain J4T80_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_01490 PF00512 His Kinase A (phospho-acceptor) domain J4T80_01495 PF00529 HlyD membrane-fusion protein of T1SS J4T80_01495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_01500 PF00873 AcrB/AcrD/AcrF family J4T80_01505 PF02321 Outer membrane efflux protein J4T80_01505 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4T80_01515 PF02219 Methylenetetrahydrofolate reductase J4T80_01520 PF02677 Epoxyqueuosine reductase QueH J4T80_01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_01525 PF03466 LysR substrate binding domain J4T80_01530 PF03358 NADPH-dependent FMN reductase J4T80_01540 PF08267 Cobalamin-independent synthase, N-terminal domain J4T80_01540 PF01717 Cobalamin-independent synthase, Catalytic domain J4T80_01545 PF03812 2-keto-3-deoxygluconate permease J4T80_01555 PF05368 NmrA-like family J4T80_01560 PF01638 HxlR-like helix-turn-helix J4T80_01565 PF00872 Transposase, Mutator family J4T80_01575 PF00872 Transposase, Mutator family J4T80_01590 PF00920 Dehydratase family J4T80_01605 PF00132 Bacterial transferase hexapeptide (six repeats) J4T80_01615 PF07690 Major Facilitator Superfamily J4T80_01620 PF01966 HD domain J4T80_01620 PF11871 Domain of unknown function (DUF3391) J4T80_01650 PF01494 FAD binding domain J4T80_01660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4T80_01660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4T80_01665 PF00230 Major intrinsic protein J4T80_01670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4T80_01670 PF01266 FAD dependent oxidoreductase J4T80_01675 PF00455 DeoR C terminal sensor domain J4T80_01675 PF08220 DeoR-like helix-turn-helix domain J4T80_01680 PF00970 Oxidoreductase FAD-binding domain J4T80_01680 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T80_01685 PF00355 Rieske [2Fe-2S] domain J4T80_01690 PF01144 Coenzyme A transferase J4T80_01695 PF01144 Coenzyme A transferase J4T80_01700 PF00108 Thiolase, N-terminal domain J4T80_01700 PF02803 Thiolase, C-terminal domain J4T80_01705 PF00775 Dioxygenase J4T80_01705 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J4T80_01715 PF10397 Adenylosuccinate lyase C-terminus J4T80_01715 PF00206 Lyase J4T80_01720 PF12146 Serine aminopeptidase, S33 J4T80_01725 PF02627 Carboxymuconolactone decarboxylase family J4T80_01735 PF09339 IclR helix-turn-helix domain J4T80_01735 PF01614 Bacterial transcriptional regulator J4T80_01745 PF07859 alpha/beta hydrolase fold J4T80_01750 PF10677 Protein of unknown function (DUF2490) J4T80_01755 PF01134 Glucose inhibited division protein A J4T80_01755 PF13932 GidA associated domain J4T80_01765 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_01785 PF13649 Methyltransferase domain J4T80_01795 PF12697 Alpha/beta hydrolase family J4T80_01805 PF00155 Aminotransferase class I and II J4T80_01810 PF06968 Biotin and Thiamin Synthesis associated domain J4T80_01810 PF04055 Radical SAM superfamily J4T80_01820 PF01040 UbiA prenyltransferase family J4T80_01835 PF05819 NolX protein J4T80_01880 PF01313 Bacterial export proteins, family 3 J4T80_01885 PF00813 FliP family J4T80_01900 PF00771 FHIPEP family J4T80_01905 PF01312 FlhB HrpN YscU SpaS Family J4T80_01920 PF01514 Secretory protein of YscJ/FliF family J4T80_01935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T80_01935 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4T80_01935 PF18269 T3SS EscN ATPase C-terminal domain J4T80_01945 PF01311 Bacterial export proteins, family 1 J4T80_01950 PF03958 Bacterial type II/III secretion system short domain J4T80_01950 PF00263 Bacterial type II and III secretion system protein J4T80_01960 PF01464 Transglycosylase SLT domain J4T80_01975 PF00924 Mechanosensitive ion channel J4T80_01975 PF12795 Mechanosensitive ion channel porin domain J4T80_01975 PF12794 Mechanosensitive ion channel inner membrane domain 1 J4T80_01980 PF00884 Sulfatase J4T80_01985 PF03109 ABC1 family J4T80_01990 PF05661 Protein of unknown function (DUF808) J4T80_01995 PF00990 Diguanylate cyclase, GGDEF domain J4T80_02000 PF00534 Glycosyl transferases group 1 J4T80_02000 PF08323 Starch synthase catalytic domain J4T80_02005 PF00128 Alpha amylase, catalytic domain J4T80_02005 PF02806 Alpha amylase, C-terminal all-beta domain J4T80_02005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4T80_02010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4T80_02010 PF11941 Domain of unknown function (DUF3459) J4T80_02010 PF00128 Alpha amylase, catalytic domain J4T80_02015 PF02446 4-alpha-glucanotransferase J4T80_02020 PF00128 Alpha amylase, catalytic domain J4T80_02030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4T80_02030 PF00128 Alpha amylase, catalytic domain J4T80_02035 PF13460 NAD(P)H-binding J4T80_02050 PF06903 VirK protein J4T80_02055 PF02321 Outer membrane efflux protein J4T80_02070 PF00873 AcrB/AcrD/AcrF family J4T80_02085 PF00270 DEAD/DEAH box helicase J4T80_02085 PF00271 Helicase conserved C-terminal domain J4T80_02090 PF02817 e3 binding domain J4T80_02090 PF00364 Biotin-requiring enzyme J4T80_02090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4T80_02100 PF02780 Transketolase, C-terminal domain J4T80_02100 PF02779 Transketolase, pyrimidine binding domain J4T80_02105 PF00676 Dehydrogenase E1 component J4T80_02115 PF03301 Tryptophan 2,3-dioxygenase J4T80_02120 PF00854 POT family J4T80_02130 PF01047 MarR family J4T80_02135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4T80_02155 PF03334 Na+/H+ antiporter subunit J4T80_02160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4T80_02170 PF00361 Proton-conducting membrane transporter J4T80_02175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4T80_02180 PF13244 Domain of unknown function (DUF4040) J4T80_02180 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4T80_02180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T80_02180 PF00361 Proton-conducting membrane transporter J4T80_02195 PF01447 Thermolysin metallopeptidase, catalytic domain J4T80_02195 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4T80_02195 PF01483 Proprotein convertase P-domain J4T80_02195 PF07504 Fungalysin/Thermolysin Propeptide Motif J4T80_02205 PF01259 SAICAR synthetase J4T80_02210 PF00226 DnaJ domain J4T80_02210 PF05099 Tellurite resistance protein TerB J4T80_02220 PF00834 Ribulose-phosphate 3 epimerase family J4T80_02225 PF00583 Acetyltransferase (GNAT) family J4T80_02230 PF00781 Diacylglycerol kinase catalytic domain J4T80_02235 PF04715 Anthranilate synthase component I, N terminal region J4T80_02235 PF00425 chorismate binding enzyme J4T80_02250 PF13356 Arm DNA-binding domain J4T80_02250 PF00589 Phage integrase family J4T80_02255 PF01609 Transposase DDE domain J4T80_02255 PF05598 Transposase domain (DUF772) J4T80_02270 PF01609 Transposase DDE domain J4T80_02270 PF05598 Transposase domain (DUF772) J4T80_02280 PF00117 Glutamine amidotransferase class-I J4T80_02290 PF02885 Glycosyl transferase family, helical bundle domain J4T80_02290 PF00591 Glycosyl transferase family, a/b domain J4T80_02295 PF00218 Indole-3-glycerol phosphate synthase J4T80_02305 PF00027 Cyclic nucleotide-binding domain J4T80_02305 PF00325 Bacterial regulatory proteins, crp family J4T80_02310 PF02675 S-adenosylmethionine decarboxylase J4T80_02315 PF00893 Small Multidrug Resistance protein J4T80_02320 PF03232 Ubiquinone biosynthesis protein COQ7 J4T80_02325 PF00572 Ribosomal protein L13 J4T80_02330 PF00380 Ribosomal protein S9/S16 J4T80_02345 PF00293 NUDIX domain J4T80_02355 PF00210 Ferritin-like domain J4T80_02360 PF00072 Response regulator receiver domain J4T80_02360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4T80_02360 PF01627 Hpt domain J4T80_02360 PF00672 HAMP domain J4T80_02360 PF00512 His Kinase A (phospho-acceptor) domain J4T80_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_02365 PF00486 Transcriptional regulatory protein, C terminal J4T80_02365 PF00072 Response regulator receiver domain J4T80_02385 PF01521 Iron-sulphur cluster biosynthesis J4T80_02395 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J4T80_02395 PF00293 NUDIX domain J4T80_02395 PF09297 NADH pyrophosphatase zinc ribbon domain J4T80_02400 PF17113 Regulatory signalling modulator protein AmpE J4T80_02400 PF03186 CobD/Cbib protein J4T80_02415 PF07690 Major Facilitator Superfamily J4T80_02420 PF03466 LysR substrate binding domain J4T80_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_02425 PF07690 Major Facilitator Superfamily J4T80_02430 PF12805 FUSC-like inner membrane protein yccS J4T80_02435 PF02843 Phosphoribosylglycinamide synthetase, C domain J4T80_02435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4T80_02435 PF02844 Phosphoribosylglycinamide synthetase, N domain J4T80_02445 PF01808 AICARFT/IMPCHase bienzyme J4T80_02445 PF02142 MGS-like domain J4T80_02450 PF01066 CDP-alcohol phosphatidyltransferase J4T80_02465 PF00782 Dual specificity phosphatase, catalytic domain J4T80_02505 PF02954 Bacterial regulatory protein, Fis family J4T80_02520 PF01381 Helix-turn-helix J4T80_02550 PF02785 Biotin carboxylase C-terminal domain J4T80_02550 PF00289 Biotin carboxylase, N-terminal domain J4T80_02550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4T80_02560 PF00364 Biotin-requiring enzyme J4T80_02565 PF01220 Dehydroquinase class II J4T80_02570 PF02683 Cytochrome C biogenesis protein transmembrane region J4T80_02570 PF11412 Disulphide bond corrector protein DsbC J4T80_02575 PF03091 CutA1 divalent ion tolerance protein J4T80_02585 PF04231 Endonuclease I J4T80_02590 PF00166 Chaperonin 10 Kd subunit J4T80_02595 PF00118 TCP-1/cpn60 chaperonin family J4T80_02605 PF07715 TonB-dependent Receptor Plug Domain J4T80_02605 PF00593 TonB dependent receptor J4T80_02610 PF00793 DAHP synthetase I family J4T80_02625 PF08450 SMP-30/Gluconolactonase/LRE-like region J4T80_02635 PF03710 Glutamate-ammonia ligase adenylyltransferase J4T80_02635 PF08335 GlnD PII-uridylyltransferase J4T80_02640 PF02592 Putative vitamin uptake transporter J4T80_02665 PF00881 Nitroreductase family J4T80_02670 PF04264 YceI-like domain J4T80_02690 PF16957 Malonate decarboxylase, alpha subunit, transporter J4T80_02695 PF06857 Malonate decarboxylase delta subunit (MdcD) J4T80_02700 PF01039 Carboxyl transferase domain J4T80_02710 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J4T80_02715 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J4T80_02720 PF00698 Acyl transferase domain J4T80_02735 PF05598 Transposase domain (DUF772) J4T80_02735 PF01609 Transposase DDE domain J4T80_02765 PF00872 Transposase, Mutator family J4T80_02815 PF00392 Bacterial regulatory proteins, gntR family J4T80_02815 PF07729 FCD domain J4T80_02855 PF05598 Transposase domain (DUF772) J4T80_02855 PF01609 Transposase DDE domain J4T80_02860 PF07745 Glycosyl hydrolase family 53 J4T80_02865 PF17831 Pyruvate dehydrogenase E1 component middle domain J4T80_02865 PF00456 Transketolase, thiamine diphosphate binding domain J4T80_02890 PF00872 Transposase, Mutator family J4T80_02910 PF05598 Transposase domain (DUF772) J4T80_02910 PF01609 Transposase DDE domain J4T80_02945 PF05598 Transposase domain (DUF772) J4T80_02945 PF01609 Transposase DDE domain J4T80_02950 PF01609 Transposase DDE domain J4T80_02950 PF05598 Transposase domain (DUF772) J4T80_02960 PF00872 Transposase, Mutator family J4T80_02970 PF00106 short chain dehydrogenase J4T80_02985 PF00106 short chain dehydrogenase J4T80_02995 PF13409 Glutathione S-transferase, N-terminal domain J4T80_03030 PF00326 Prolyl oligopeptidase family J4T80_03030 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J4T80_03035 PF07759 Protein of unknown function (DUF1615) J4T80_03040 PF00990 Diguanylate cyclase, GGDEF domain J4T80_03065 PF00892 EamA-like transporter family J4T80_03070 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4T80_03080 PF00324 Amino acid permease J4T80_03090 PF01544 CorA-like Mg2+ transporter protein J4T80_03100 PF01204 Trehalase J4T80_03110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4T80_03110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4T80_03135 PF00563 EAL domain J4T80_03135 PF00990 Diguanylate cyclase, GGDEF domain J4T80_03135 PF03707 Bacterial signalling protein N terminal repeat J4T80_03145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_03145 PF02203 Tar ligand binding domain homologue J4T80_03145 PF00672 HAMP domain J4T80_03150 PF00553 Cellulose binding domain J4T80_03150 PF00150 Cellulase (glycosyl hydrolase family 5) J4T80_03155 PF01740 STAS domain J4T80_03155 PF00916 Sulfate permease family J4T80_03170 PF13632 Glycosyl transferase family group 2 J4T80_03180 PF07694 5TMR of 5TMR-LYT J4T80_03180 PF06580 Histidine kinase J4T80_03185 PF00072 Response regulator receiver domain J4T80_03185 PF04397 LytTr DNA-binding domain J4T80_03190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4T80_03190 PF03900 Porphobilinogen deaminase, C-terminal domain J4T80_03215 PF00326 Prolyl oligopeptidase family J4T80_03215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4T80_03220 PF00155 Aminotransferase class I and II J4T80_03225 PF00326 Prolyl oligopeptidase family J4T80_03225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4T80_03230 PF04304 Protein of unknown function (DUF454) J4T80_03240 PF01678 Diaminopimelate epimerase J4T80_03250 PF02899 Phage integrase, N-terminal SAM-like domain J4T80_03250 PF00589 Phage integrase family J4T80_03255 PF00227 Proteasome subunit J4T80_03260 PF10431 C-terminal, D2-small domain, of ClpB protein J4T80_03260 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_03260 PF07724 AAA domain (Cdc48 subfamily) J4T80_03270 PF13673 Acetyltransferase (GNAT) domain J4T80_03275 PF13533 Biotin-lipoyl like J4T80_03285 PF01209 ubiE/COQ5 methyltransferase family J4T80_03290 PF00563 EAL domain J4T80_03290 PF00990 Diguanylate cyclase, GGDEF domain J4T80_03290 PF03707 Bacterial signalling protein N terminal repeat J4T80_03295 PF01433 Peptidase family M1 domain J4T80_03295 PF11838 ERAP1-like C-terminal domain J4T80_03310 PF13360 PQQ-like domain J4T80_03330 PF00107 Zinc-binding dehydrogenase J4T80_03330 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_03340 PF01590 GAF domain J4T80_03340 PF02954 Bacterial regulatory protein, Fis family J4T80_03340 PF00158 Sigma-54 interaction domain J4T80_03345 PF00294 pfkB family carbohydrate kinase J4T80_03355 PF04085 rod shape-determining protein MreC J4T80_03365 PF00905 Penicillin binding protein transpeptidase domain J4T80_03365 PF03717 Penicillin-binding Protein dimerisation domain J4T80_03370 PF01098 Cell cycle protein J4T80_03375 PF00295 Glycosyl hydrolases family 28 J4T80_03380 PF13406 Transglycosylase SLT domain J4T80_03385 PF05036 Sporulation related domain J4T80_03385 PF03330 Lytic transglycolase J4T80_03390 PF00768 D-alanyl-D-alanine carboxypeptidase J4T80_03390 PF07943 Penicillin-binding protein 5, C-terminal domain J4T80_03400 PF04359 Protein of unknown function (DUF493) J4T80_03405 PF03099 Biotin/lipoate A/B protein ligase family J4T80_03410 PF04055 Radical SAM superfamily J4T80_03410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4T80_03415 PF00595 PDZ domain J4T80_03415 PF17804 Tail specific protease N-terminal domain J4T80_03415 PF03572 Peptidase family S41 J4T80_03415 PF11818 C-terminal domain of tail specific protease (DUF3340) J4T80_03425 PF03466 LysR substrate binding domain J4T80_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_03435 PF01467 Cytidylyltransferase-like J4T80_03435 PF00293 NUDIX domain J4T80_03470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4T80_03470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4T80_03475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4T80_03475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4T80_03480 PF04972 BON domain J4T80_03485 PF01590 GAF domain J4T80_03485 PF00360 Phytochrome region J4T80_03485 PF08446 PAS fold J4T80_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_03485 PF00512 His Kinase A (phospho-acceptor) domain J4T80_03490 PF00072 Response regulator receiver domain J4T80_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_03495 PF00512 His Kinase A (phospho-acceptor) domain J4T80_03500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4T80_03505 PF00106 short chain dehydrogenase J4T80_03545 PF03958 Bacterial type II/III secretion system short domain J4T80_03545 PF00263 Bacterial type II and III secretion system protein J4T80_03550 PF00437 Type II/IV secretion system protein J4T80_03555 PF00482 Type II secretion system (T2SS), protein F J4T80_03560 PF07963 Prokaryotic N-terminal methylation motif J4T80_03560 PF08334 Type II secretion system (T2SS), protein G J4T80_03565 PF12019 Type II transport protein GspH J4T80_03565 PF07963 Prokaryotic N-terminal methylation motif J4T80_03570 PF02501 Type II secretion system (T2SS), protein I J4T80_03570 PF07963 Prokaryotic N-terminal methylation motif J4T80_03575 PF07963 Prokaryotic N-terminal methylation motif J4T80_03575 PF11612 Type II secretion system (T2SS), protein J J4T80_03580 PF03934 Type II secretion system (T2SS), protein K J4T80_03605 PF16355 Domain of unknown function (DUF4982) J4T80_03605 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J4T80_03605 PF00703 Glycosyl hydrolases family 2 J4T80_03605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4T80_03605 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4T80_03620 PF07702 UTRA domain J4T80_03620 PF00392 Bacterial regulatory proteins, gntR family J4T80_03625 PF07690 Major Facilitator Superfamily J4T80_03630 PF00356 Bacterial regulatory proteins, lacI family J4T80_03635 PF01380 SIS domain J4T80_03640 PF01979 Amidohydrolase family J4T80_03655 PF01966 HD domain J4T80_03655 PF01743 Poly A polymerase head domain J4T80_03655 PF12627 Probable RNA and SrmB- binding site of polymerase A J4T80_03660 PF00732 GMC oxidoreductase J4T80_03660 PF05199 GMC oxidoreductase J4T80_03665 PF00171 Aldehyde dehydrogenase family J4T80_03670 PF02028 BCCT, betaine/carnitine/choline family transporter J4T80_03685 PF01323 DSBA-like thioredoxin domain J4T80_03695 PF00034 Cytochrome c J4T80_03700 PF01926 50S ribosome-binding GTPase J4T80_03715 PF04107 Glutamate-cysteine ligase family 2(GCS2) J4T80_03720 PF00512 His Kinase A (phospho-acceptor) domain J4T80_03720 PF00672 HAMP domain J4T80_03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_03725 PF00486 Transcriptional regulatory protein, C terminal J4T80_03725 PF00072 Response regulator receiver domain J4T80_03740 PF02583 Metal-sensitive transcriptional repressor J4T80_03745 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_03745 PF00107 Zinc-binding dehydrogenase J4T80_03750 PF04828 Glutathione-dependent formaldehyde-activating enzyme J4T80_03755 PF00756 Putative esterase J4T80_03765 PF00155 Aminotransferase class I and II J4T80_03765 PF00392 Bacterial regulatory proteins, gntR family J4T80_03770 PF02567 Phenazine biosynthesis-like protein J4T80_03785 PF00005 ABC transporter J4T80_03785 PF12848 ABC transporter J4T80_03795 PF00464 Serine hydroxymethyltransferase J4T80_03800 PF03477 ATP cone domain J4T80_03810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4T80_03810 PF01872 RibD C-terminal domain J4T80_03820 PF00677 Lumazine binding domain J4T80_03825 PF00925 GTP cyclohydrolase II J4T80_03825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4T80_03830 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4T80_03835 PF01029 NusB family J4T80_03840 PF00586 AIR synthase related protein, N-terminal domain J4T80_03840 PF02769 AIR synthase related protein, C-terminal domain J4T80_03860 PF03814 Potassium-transporting ATPase A subunit J4T80_03870 PF02669 K+-transporting ATPase, c chain J4T80_03875 PF02702 Osmosensitive K+ channel His kinase sensor domain J4T80_03875 PF00512 His Kinase A (phospho-acceptor) domain J4T80_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_03875 PF13492 GAF domain J4T80_03875 PF13493 Domain of unknown function (DUF4118) J4T80_03880 PF00486 Transcriptional regulatory protein, C terminal J4T80_03880 PF00072 Response regulator receiver domain J4T80_03885 PF01565 FAD binding domain J4T80_03885 PF02913 FAD linked oxidases, C-terminal domain J4T80_03890 PF04307 LexA-binding, inner membrane-associated putative hydrolase J4T80_03895 PF02021 Uncharacterised protein family UPF0102 J4T80_03905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4T80_03920 PF02381 MraZ protein, putative antitoxin-like J4T80_03925 PF01795 MraW methylase family J4T80_03930 PF04999 Cell division protein FtsL J4T80_03935 PF03717 Penicillin-binding Protein dimerisation domain J4T80_03935 PF00905 Penicillin binding protein transpeptidase domain J4T80_03940 PF08245 Mur ligase middle domain J4T80_03940 PF01225 Mur ligase family, catalytic domain J4T80_03940 PF02875 Mur ligase family, glutamate ligase domain J4T80_03945 PF01225 Mur ligase family, catalytic domain J4T80_03945 PF02875 Mur ligase family, glutamate ligase domain J4T80_03945 PF08245 Mur ligase middle domain J4T80_03950 PF00953 Glycosyl transferase family 4 J4T80_03955 PF01098 Cell cycle protein J4T80_03960 PF04101 Glycosyltransferase family 28 C-terminal domain J4T80_03960 PF03033 Glycosyltransferase family 28 N-terminal domain J4T80_03965 PF02875 Mur ligase family, glutamate ligase domain J4T80_03965 PF08245 Mur ligase middle domain J4T80_03965 PF01225 Mur ligase family, catalytic domain J4T80_03970 PF07478 D-ala D-ala ligase C-terminus J4T80_03970 PF01820 D-ala D-ala ligase N-terminus J4T80_03975 PF03799 Cell division protein FtsQ J4T80_03975 PF08478 POTRA domain, FtsQ-type J4T80_03980 PF02491 SHS2 domain inserted in FTSA J4T80_03985 PF12327 FtsZ family, C-terminal domain J4T80_03985 PF00091 Tubulin/FtsZ family, GTPase domain J4T80_03990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4T80_04000 PF08525 Opacity-associated protein A N-terminal motif J4T80_04000 PF01476 LysM domain J4T80_04000 PF01551 Peptidase family M23 J4T80_04005 PF02810 SEC-C motif J4T80_04005 PF07516 SecA Wing and Scaffold domain J4T80_04005 PF01043 SecA preprotein cross-linking domain J4T80_04005 PF07517 SecA DEAD-like domain J4T80_04010 PF00293 NUDIX domain J4T80_04020 PF02219 Methylenetetrahydrofolate reductase J4T80_04030 PF00872 Transposase, Mutator family J4T80_04040 PF08659 KR domain J4T80_04040 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_04040 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_04040 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_04040 PF00107 Zinc-binding dehydrogenase J4T80_04040 PF00550 Phosphopantetheine attachment site J4T80_04040 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_04040 PF00698 Acyl transferase domain J4T80_04040 PF14765 Polyketide synthase dehydratase J4T80_04045 PF00082 Subtilase family J4T80_04045 PF09286 Pro-kumamolisin, activation domain J4T80_04055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4T80_04060 PF00128 Alpha amylase, catalytic domain J4T80_04085 PF00685 Sulfotransferase domain J4T80_04095 PF13649 Methyltransferase domain J4T80_04100 PF05221 S-adenosyl-L-homocysteine hydrolase J4T80_04100 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4T80_04110 PF00311 Phosphoenolpyruvate carboxylase J4T80_04130 PF01389 OmpA-like transmembrane domain J4T80_04130 PF00691 OmpA family J4T80_04145 PF00328 Histidine phosphatase superfamily (branch 2) J4T80_04150 PF05598 Transposase domain (DUF772) J4T80_04150 PF01609 Transposase DDE domain J4T80_04155 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4T80_04155 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4T80_04155 PF02772 S-adenosylmethionine synthetase, central domain J4T80_04165 PF13649 Methyltransferase domain J4T80_04170 PF01207 Dihydrouridine synthase (Dus) J4T80_04180 PF00294 pfkB family carbohydrate kinase J4T80_04185 PF07662 Na+ dependent nucleoside transporter C-terminus J4T80_04185 PF01773 Na+ dependent nucleoside transporter N-terminus J4T80_04185 PF07670 Nucleoside recognition J4T80_04200 PF00248 Aldo/keto reductase family J4T80_04210 PF00593 TonB dependent receptor J4T80_04210 PF07715 TonB-dependent Receptor Plug Domain J4T80_04230 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_04235 PF00005 ABC transporter J4T80_04245 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J4T80_04255 PF00005 ABC transporter J4T80_04260 PF13472 GDSL-like Lipase/Acylhydrolase family J4T80_04265 PF00072 Response regulator receiver domain J4T80_04265 PF00486 Transcriptional regulatory protein, C terminal J4T80_04270 PF08521 Two-component sensor kinase N-terminal J4T80_04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_04270 PF00512 His Kinase A (phospho-acceptor) domain J4T80_04280 PF01219 Prokaryotic diacylglycerol kinase J4T80_04300 PF01790 Prolipoprotein diacylglyceryl transferase J4T80_04305 PF00303 Thymidylate synthase J4T80_04315 PF00186 Dihydrofolate reductase J4T80_04320 PF00158 Sigma-54 interaction domain J4T80_04325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_04325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J4T80_04330 PF00005 ABC transporter J4T80_04335 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_04345 PF00296 Luciferase-like monooxygenase J4T80_04350 PF03358 NADPH-dependent FMN reductase J4T80_04375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4T80_04380 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_04385 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_04385 PF12911 N-terminal TM domain of oligopeptide transport permease C J4T80_04390 PF00005 ABC transporter J4T80_04390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4T80_04395 PF00149 Calcineurin-like phosphoesterase J4T80_04400 PF04379 ApaG domain J4T80_04405 PF00398 Ribosomal RNA adenine dimethylase J4T80_04410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4T80_04415 PF09312 SurA N-terminal domain J4T80_04415 PF00639 PPIC-type PPIASE domain J4T80_04420 PF03968 OstA-like protein J4T80_04420 PF04453 LPS transport system D J4T80_04430 PF00850 Histone deacetylase domain J4T80_04435 PF01923 Cobalamin adenosyltransferase J4T80_04450 PF01494 FAD binding domain J4T80_04455 PF01494 FAD binding domain J4T80_04475 PF07729 FCD domain J4T80_04475 PF00392 Bacterial regulatory proteins, gntR family J4T80_04480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4T80_04485 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J4T80_04485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4T80_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_04490 PF03466 LysR substrate binding domain J4T80_04500 PF00171 Aldehyde dehydrogenase family J4T80_04505 PF00378 Enoyl-CoA hydratase/isomerase J4T80_04530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4T80_04530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4T80_04535 PF18125 RlmM ferredoxin-like domain J4T80_04535 PF01728 FtsJ-like methyltransferase J4T80_04560 PF00892 EamA-like transporter family J4T80_04570 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4T80_04570 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4T80_04585 PF00990 Diguanylate cyclase, GGDEF domain J4T80_04585 PF00072 Response regulator receiver domain J4T80_04590 PF17149 Periplasmic sensor domain found in signal transduction proteins J4T80_04590 PF00672 HAMP domain J4T80_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_04590 PF00512 His Kinase A (phospho-acceptor) domain J4T80_04590 PF01627 Hpt domain J4T80_04590 PF00072 Response regulator receiver domain J4T80_04595 PF00196 Bacterial regulatory proteins, luxR family J4T80_04595 PF00072 Response regulator receiver domain J4T80_04605 PF01625 Peptide methionine sulfoxide reductase J4T80_04615 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4T80_04620 PF14760 Rnk N-terminus J4T80_04620 PF01272 Transcription elongation factor, GreA/GreB, C-term J4T80_04625 PF03466 LysR substrate binding domain J4T80_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_04630 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_04630 PF13192 Thioredoxin domain J4T80_04635 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4T80_04635 PF00578 AhpC/TSA family J4T80_04640 PF05175 Methyltransferase small domain J4T80_04640 PF17827 PrmC N-terminal domain J4T80_04645 PF00561 alpha/beta hydrolase fold J4T80_04655 PF00293 NUDIX domain J4T80_04660 PF01367 5'-3' exonuclease, C-terminal SAM fold J4T80_04660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4T80_04660 PF00476 DNA polymerase family A J4T80_04660 PF01612 3'-5' exonuclease J4T80_04685 PF00872 Transposase, Mutator family J4T80_04725 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4T80_04730 PF02233 NAD(P) transhydrogenase beta subunit J4T80_04745 PF01063 Amino-transferase class IV J4T80_04750 PF04151 Bacterial pre-peptidase C-terminal domain J4T80_04750 PF00082 Subtilase family J4T80_04755 PF00082 Subtilase family J4T80_04755 PF04151 Bacterial pre-peptidase C-terminal domain J4T80_04760 PF04151 Bacterial pre-peptidase C-terminal domain J4T80_04760 PF00082 Subtilase family J4T80_04765 PF04073 Aminoacyl-tRNA editing domain J4T80_04785 PF03358 NADPH-dependent FMN reductase J4T80_04790 PF03631 Virulence factor BrkB J4T80_04795 PF08534 Redoxin J4T80_04800 PF00708 Acylphosphatase J4T80_04810 PF03976 Polyphosphate kinase 2 (PPK2) J4T80_04815 PF00994 Probable molybdopterin binding domain J4T80_04825 PF00472 RF-1 domain J4T80_04825 PF03462 PCRF domain J4T80_04830 PF01488 Shikimate / quinate 5-dehydrogenase J4T80_04830 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4T80_04830 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4T80_04840 PF03550 Outer membrane lipoprotein LolB J4T80_04845 PF00288 GHMP kinases N terminal domain J4T80_04845 PF08544 GHMP kinases C terminal J4T80_04855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4T80_04855 PF14572 Phosphoribosyl synthetase-associated domain J4T80_04860 PF14693 Ribosomal protein TL5, C-terminal domain J4T80_04860 PF01386 Ribosomal L25p family J4T80_04865 PF01195 Peptidyl-tRNA hydrolase J4T80_04870 PF01926 50S ribosome-binding GTPase J4T80_04870 PF06071 Protein of unknown function (DUF933) J4T80_04890 PF03143 Elongation factor Tu C-terminal domain J4T80_04890 PF03144 Elongation factor Tu domain 2 J4T80_04890 PF00009 Elongation factor Tu GTP binding domain J4T80_04900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4T80_04905 PF00467 KOW motif J4T80_04905 PF02357 Transcription termination factor nusG J4T80_04910 PF00298 Ribosomal protein L11, RNA binding domain J4T80_04910 PF03946 Ribosomal protein L11, N-terminal domain J4T80_04915 PF00687 Ribosomal protein L1p/L10e family J4T80_04920 PF00466 Ribosomal protein L10 J4T80_04925 PF16320 Ribosomal protein L7/L12 dimerisation domain J4T80_04925 PF00542 Ribosomal protein L7/L12 C-terminal domain J4T80_04930 PF04563 RNA polymerase beta subunit J4T80_04930 PF04561 RNA polymerase Rpb2, domain 2 J4T80_04930 PF04565 RNA polymerase Rpb2, domain 3 J4T80_04930 PF10385 RNA polymerase beta subunit external 1 domain J4T80_04930 PF00562 RNA polymerase Rpb2, domain 6 J4T80_04930 PF04560 RNA polymerase Rpb2, domain 7 J4T80_04935 PF05000 RNA polymerase Rpb1, domain 4 J4T80_04935 PF04998 RNA polymerase Rpb1, domain 5 J4T80_04935 PF04997 RNA polymerase Rpb1, domain 1 J4T80_04935 PF00623 RNA polymerase Rpb1, domain 2 J4T80_04935 PF04983 RNA polymerase Rpb1, domain 3 J4T80_04940 PF00164 Ribosomal protein S12/S23 J4T80_04945 PF00177 Ribosomal protein S7p/S5e J4T80_04950 PF00679 Elongation factor G C-terminus J4T80_04950 PF14492 Elongation Factor G, domain II J4T80_04950 PF03764 Elongation factor G, domain IV J4T80_04950 PF00009 Elongation factor Tu GTP binding domain J4T80_04950 PF03144 Elongation factor Tu domain 2 J4T80_04955 PF03144 Elongation factor Tu domain 2 J4T80_04955 PF00009 Elongation factor Tu GTP binding domain J4T80_04955 PF03143 Elongation factor Tu C-terminal domain J4T80_04960 PF00338 Ribosomal protein S10p/S20e J4T80_04965 PF00297 Ribosomal protein L3 J4T80_04970 PF00573 Ribosomal protein L4/L1 family J4T80_04975 PF00276 Ribosomal protein L23 J4T80_04980 PF00181 Ribosomal Proteins L2, RNA binding domain J4T80_04980 PF03947 Ribosomal Proteins L2, C-terminal domain J4T80_04985 PF00203 Ribosomal protein S19 J4T80_04990 PF00237 Ribosomal protein L22p/L17e J4T80_04995 PF07650 KH domain J4T80_04995 PF00189 Ribosomal protein S3, C-terminal domain J4T80_05000 PF00252 Ribosomal protein L16p/L10e J4T80_05005 PF00831 Ribosomal L29 protein J4T80_05010 PF00366 Ribosomal protein S17 J4T80_05015 PF00238 Ribosomal protein L14p/L23e J4T80_05020 PF00467 KOW motif J4T80_05020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4T80_05025 PF00281 Ribosomal protein L5 J4T80_05025 PF00673 ribosomal L5P family C-terminus J4T80_05030 PF00253 Ribosomal protein S14p/S29e J4T80_05035 PF00410 Ribosomal protein S8 J4T80_05040 PF00347 Ribosomal protein L6 J4T80_05045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4T80_05050 PF03719 Ribosomal protein S5, C-terminal domain J4T80_05050 PF00333 Ribosomal protein S5, N-terminal domain J4T80_05055 PF00327 Ribosomal protein L30p/L7e J4T80_05060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4T80_05065 PF00344 SecY translocase J4T80_05070 PF00416 Ribosomal protein S13/S18 J4T80_05075 PF00411 Ribosomal protein S11 J4T80_05080 PF00163 Ribosomal protein S4/S9 N-terminal domain J4T80_05080 PF01479 S4 domain J4T80_05085 PF01000 RNA polymerase Rpb3/RpoA insert domain J4T80_05085 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4T80_05085 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4T80_05090 PF01196 Ribosomal protein L17 J4T80_05095 PF02600 Disulfide bond formation protein DsbB J4T80_05110 PF01474 Class-II DAHP synthetase family J4T80_05125 PF01425 Amidase J4T80_05135 PF00679 Elongation factor G C-terminus J4T80_05135 PF00009 Elongation factor Tu GTP binding domain J4T80_05135 PF03144 Elongation factor Tu domain 2 J4T80_05140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4T80_05145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4T80_05145 PF00056 lactate/malate dehydrogenase, NAD binding domain J4T80_05150 PF02798 Glutathione S-transferase, N-terminal domain J4T80_05150 PF00043 Glutathione S-transferase, C-terminal domain J4T80_05160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4T80_05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_05165 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_05165 PF00107 Zinc-binding dehydrogenase J4T80_05170 PF00691 OmpA family J4T80_05170 PF05736 OprF membrane domain J4T80_05180 PF00849 RNA pseudouridylate synthase J4T80_05190 PF00155 Aminotransferase class I and II J4T80_05200 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_05205 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_05210 PF17850 CysA C-terminal regulatory domain J4T80_05210 PF12857 TOBE-like domain J4T80_05210 PF00005 ABC transporter J4T80_05220 PF00107 Zinc-binding dehydrogenase J4T80_05220 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_05230 PF04185 Phosphoesterase family J4T80_05230 PF05506 Domain of unknown function (DUF756) J4T80_05235 PF10459 Peptidase S46 J4T80_05240 PF00300 Histidine phosphatase superfamily (branch 1) J4T80_05245 PF02875 Mur ligase family, glutamate ligase domain J4T80_05245 PF08245 Mur ligase middle domain J4T80_05260 PF00156 Phosphoribosyl transferase domain J4T80_05265 PF04305 Protein of unknown function (DUF455) J4T80_05280 PF00149 Calcineurin-like phosphoesterase J4T80_05285 PF01569 PAP2 superfamily J4T80_05290 PF13439 Glycosyltransferase Family 4 J4T80_05290 PF00534 Glycosyl transferases group 1 J4T80_05295 PF02541 Ppx/GppA phosphatase family J4T80_05300 PF13089 Polyphosphate kinase N-terminal domain J4T80_05300 PF17941 Polyphosphate kinase C-terminal domain 1 J4T80_05300 PF13090 Polyphosphate kinase C-terminal domain 2 J4T80_05300 PF02503 Polyphosphate kinase middle domain J4T80_05305 PF11808 Phosphate regulon sensor protein PhoR J4T80_05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_05305 PF00512 His Kinase A (phospho-acceptor) domain J4T80_05305 PF00989 PAS fold J4T80_05310 PF00486 Transcriptional regulatory protein, C terminal J4T80_05310 PF00072 Response regulator receiver domain J4T80_05315 PF01435 Peptidase family M48 J4T80_05315 PF13181 Tetratricopeptide repeat J4T80_05320 PF00462 Glutaredoxin J4T80_05330 PF00180 Isocitrate/isopropylmalate dehydrogenase J4T80_05370 PF05697 Bacterial trigger factor protein (TF) J4T80_05370 PF05698 Bacterial trigger factor protein (TF) C-terminus J4T80_05375 PF00574 Clp protease J4T80_05380 PF07724 AAA domain (Cdc48 subfamily) J4T80_05380 PF10431 C-terminal, D2-small domain, of ClpB protein J4T80_05380 PF06689 ClpX C4-type zinc finger J4T80_05385 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_05385 PF05362 Lon protease (S16) C-terminal proteolytic domain J4T80_05385 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4T80_05390 PF00216 Bacterial DNA-binding protein J4T80_05415 PF01476 LysM domain J4T80_05415 PF05257 CHAP domain J4T80_05420 PF00753 Metallo-beta-lactamase superfamily J4T80_05420 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4T80_05430 PF00075 RNase H J4T80_05435 PF00929 Exonuclease J4T80_05455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4T80_05465 PF00753 Metallo-beta-lactamase superfamily J4T80_05465 PF12706 Beta-lactamase superfamily domain J4T80_05470 PF06463 Molybdenum Cofactor Synthesis C J4T80_05470 PF04055 Radical SAM superfamily J4T80_05480 PF01967 MoaC family J4T80_05485 PF02597 ThiS family J4T80_05490 PF02391 MoaE protein J4T80_05510 PF00872 Transposase, Mutator family J4T80_05535 PF05598 Transposase domain (DUF772) J4T80_05535 PF01609 Transposase DDE domain J4T80_05540 PF00872 Transposase, Mutator family J4T80_05565 PF12169 DNA polymerase III subunits gamma and tau domain III J4T80_05565 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4T80_05565 PF12170 DNA polymerase III tau subunit V interacting with alpha J4T80_05570 PF02575 YbaB/EbfC DNA-binding family J4T80_05575 PF02132 RecR protein J4T80_05575 PF13662 Toprim domain J4T80_05580 PF01230 HIT domain J4T80_05590 PF11992 Domain of unknown function (DUF3488) J4T80_05590 PF13559 Domain of unknown function (DUF4129) J4T80_05590 PF01841 Transglutaminase-like superfamily J4T80_05600 PF17863 AAA lid domain J4T80_05600 PF07726 ATPase family associated with various cellular activities (AAA) J4T80_05625 PF02545 Maf-like protein J4T80_05630 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4T80_05635 PF01783 Ribosomal L32p protein family J4T80_05640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T80_05640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T80_05650 PF00698 Acyl transferase domain J4T80_05660 PF00550 Phosphopantetheine attachment site J4T80_05665 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_05665 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_05670 PF04715 Anthranilate synthase component I, N terminal region J4T80_05670 PF00425 chorismate binding enzyme J4T80_05675 PF02618 YceG-like family J4T80_05680 PF09115 DNA polymerase III, delta subunit, C terminal J4T80_05700 PF06506 Propionate catabolism activator J4T80_05700 PF00158 Sigma-54 interaction domain J4T80_05700 PF02954 Bacterial regulatory protein, Fis family J4T80_05710 PF00285 Citrate synthase, C-terminal domain J4T80_05715 PF00330 Aconitase family (aconitate hydratase) J4T80_05715 PF00694 Aconitase C-terminal domain J4T80_05725 PF04303 PrpF protein J4T80_05730 PF00593 TonB dependent receptor J4T80_05730 PF07715 TonB-dependent Receptor Plug Domain J4T80_05740 PF07703 Alpha-2-macroglobulin bait region domain J4T80_05740 PF00207 Alpha-2-macroglobulin family J4T80_05740 PF01835 MG2 domain J4T80_05740 PF17962 Bacterial macroglobulin domain 6 J4T80_05740 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J4T80_05740 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J4T80_05740 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J4T80_05740 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J4T80_05755 PF06832 Penicillin-Binding Protein C-terminus Family J4T80_05755 PF00905 Penicillin binding protein transpeptidase domain J4T80_05755 PF00912 Transglycosylase J4T80_05765 PF08534 Redoxin J4T80_05775 PF00226 DnaJ domain J4T80_05775 PF01556 DnaJ C terminal domain J4T80_05780 PF00072 Response regulator receiver domain J4T80_05785 PF01145 SPFH domain / Band 7 family J4T80_05785 PF12221 Bacterial membrane protein N terminal J4T80_05790 PF01145 SPFH domain / Band 7 family J4T80_05800 PF00709 Adenylosuccinate synthetase J4T80_05820 PF00440 Bacterial regulatory proteins, tetR family J4T80_05850 PF00872 Transposase, Mutator family J4T80_05870 PF11867 Domain of unknown function (DUF3387) J4T80_05870 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4T80_05870 PF18766 SWI2/SNF2 ATPase J4T80_05895 PF00300 Histidine phosphatase superfamily (branch 1) J4T80_05895 PF13456 Reverse transcriptase-like J4T80_05900 PF01256 Carbohydrate kinase J4T80_05910 PF05598 Transposase domain (DUF772) J4T80_05910 PF01609 Transposase DDE domain J4T80_05915 PF00723 Glycosyl hydrolases family 15 J4T80_05925 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4T80_05925 PF07971 Glycosyl hydrolase family 92 J4T80_05930 PF00106 short chain dehydrogenase J4T80_05945 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_05970 PF17755 UvrA DNA-binding domain J4T80_05980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4T80_05980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4T80_05985 PF03450 CO dehydrogenase flavoprotein C-terminal domain J4T80_05985 PF00941 FAD binding domain in molybdopterin dehydrogenase J4T80_05990 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T80_05990 PF01799 [2Fe-2S] binding domain J4T80_06025 PF00717 Peptidase S24-like J4T80_06025 PF01726 LexA DNA binding domain J4T80_06040 PF02811 PHP domain J4T80_06040 PF14579 Helix-hairpin-helix motif J4T80_06040 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4T80_06040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4T80_06060 PF03169 OPT oligopeptide transporter protein J4T80_06075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J4T80_06075 PF00326 Prolyl oligopeptidase family J4T80_06075 PF07676 WD40-like Beta Propeller Repeat J4T80_06090 PF02311 AraC-like ligand binding domain J4T80_06090 PF12833 Helix-turn-helix domain J4T80_06110 PF00199 Catalase J4T80_06110 PF06628 Catalase-related immune-responsive J4T80_06110 PF18011 C-terminal domain found in long catalases J4T80_06115 PF00248 Aldo/keto reductase family J4T80_06120 PF00135 Carboxylesterase family J4T80_06125 PF02347 Glycine cleavage system P-protein J4T80_06130 PF07690 Major Facilitator Superfamily J4T80_06145 PF08019 Phosphoethanolamine transferase EptA/EptB J4T80_06145 PF00884 Sulfatase J4T80_06160 PF00072 Response regulator receiver domain J4T80_06160 PF00486 Transcriptional regulatory protein, C terminal J4T80_06165 PF08521 Two-component sensor kinase N-terminal J4T80_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06165 PF00512 His Kinase A (phospho-acceptor) domain J4T80_06175 PF03776 Septum formation topological specificity factor MinE J4T80_06180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4T80_06185 PF03775 Septum formation inhibitor MinC, C-terminal domain J4T80_06185 PF05209 Septum formation inhibitor MinC, N-terminal domain J4T80_06195 PF07730 Histidine kinase J4T80_06200 PF00072 Response regulator receiver domain J4T80_06200 PF00196 Bacterial regulatory proteins, luxR family J4T80_06215 PF00730 HhH-GPD superfamily base excision DNA repair protein J4T80_06240 PF02222 ATP-grasp domain J4T80_06250 PF04377 Arginine-tRNA-protein transferase, C terminus J4T80_06250 PF04376 Arginine-tRNA-protein transferase, N terminus J4T80_06275 PF00378 Enoyl-CoA hydratase/isomerase J4T80_06290 PF17755 UvrA DNA-binding domain J4T80_06290 PF00005 ABC transporter J4T80_06290 PF17760 UvrA interaction domain J4T80_06295 PF00829 Ribosomal prokaryotic L21 protein J4T80_06300 PF01016 Ribosomal L27 protein J4T80_06305 PF01018 GTP1/OBG J4T80_06305 PF01926 50S ribosome-binding GTPase J4T80_06310 PF01649 Ribosomal protein S20 J4T80_06315 PF03023 Lipid II flippase MurJ J4T80_06320 PF06574 FAD synthetase J4T80_06320 PF01687 Riboflavin kinase J4T80_06325 PF00133 tRNA synthetases class I (I, L, M and V) J4T80_06325 PF08264 Anticodon-binding domain of tRNA J4T80_06325 PF06827 Zinc finger found in FPG and IleRS J4T80_06330 PF01252 Signal peptidase (SPase) II J4T80_06335 PF02401 LytB protein J4T80_06360 PF00872 Transposase, Mutator family J4T80_06375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4T80_06375 PF06481 COX Aromatic Rich Motif J4T80_06380 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4T80_06385 PF00510 Cytochrome c oxidase subunit III J4T80_06390 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4T80_06400 PF18073 Rubredoxin metal binding domain J4T80_06405 PF05656 Protein of unknown function (DUF805) J4T80_06415 PF12833 Helix-turn-helix domain J4T80_06420 PF00183 Hsp90 protein J4T80_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06430 PF01740 STAS domain J4T80_06430 PF08678 Rsbr N terminal J4T80_06435 PF01740 STAS domain J4T80_06440 PF13581 Histidine kinase-like ATPase domain J4T80_06450 PF00072 Response regulator receiver domain J4T80_06450 PF01627 Hpt domain J4T80_06450 PF00512 His Kinase A (phospho-acceptor) domain J4T80_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06450 PF00672 HAMP domain J4T80_06450 PF17149 Periplasmic sensor domain found in signal transduction proteins J4T80_06455 PF00512 His Kinase A (phospho-acceptor) domain J4T80_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06455 PF08448 PAS fold J4T80_06455 PF13188 PAS domain J4T80_06455 PF00072 Response regulator receiver domain J4T80_06465 PF00593 TonB dependent receptor J4T80_06465 PF07715 TonB-dependent Receptor Plug Domain J4T80_06470 PF00085 Thioredoxin J4T80_06475 PF07237 Protein of unknown function (DUF1428) J4T80_06480 PF00512 His Kinase A (phospho-acceptor) domain J4T80_06480 PF13493 Domain of unknown function (DUF4118) J4T80_06480 PF13492 GAF domain J4T80_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06480 PF02702 Osmosensitive K+ channel His kinase sensor domain J4T80_06485 PF01339 CheB methylesterase J4T80_06490 PF03705 CheR methyltransferase, all-alpha domain J4T80_06490 PF01739 CheR methyltransferase, SAM binding domain J4T80_06495 PF00072 Response regulator receiver domain J4T80_06495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4T80_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06495 PF00672 HAMP domain J4T80_06495 PF00512 His Kinase A (phospho-acceptor) domain J4T80_06495 PF01627 Hpt domain J4T80_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_06500 PF13426 PAS domain J4T80_06500 PF00072 Response regulator receiver domain J4T80_06505 PF00072 Response regulator receiver domain J4T80_06520 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J4T80_06525 PF01263 Aldose 1-epimerase J4T80_06530 PF01578 Cytochrome C assembly protein J4T80_06535 PF02881 SRP54-type protein, helical bundle domain J4T80_06535 PF02978 Signal peptide binding domain J4T80_06535 PF00448 SRP54-type protein, GTPase domain J4T80_06540 PF03060 Nitronate monooxygenase J4T80_06550 PF00886 Ribosomal protein S16 J4T80_06555 PF01782 RimM N-terminal domain J4T80_06555 PF05239 PRC-barrel domain J4T80_06560 PF01746 tRNA (Guanine-1)-methyltransferase J4T80_06565 PF01245 Ribosomal protein L19 J4T80_06570 PF01554 MatE J4T80_06585 PF01479 S4 domain J4T80_06590 PF00141 Peroxidase J4T80_06600 PF05192 MutS domain III J4T80_06600 PF05190 MutS family domain IV J4T80_06600 PF00488 MutS domain V J4T80_06600 PF01624 MutS domain I J4T80_06600 PF05188 MutS domain II J4T80_06615 PF00872 Transposase, Mutator family J4T80_06630 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4T80_06630 PF00703 Glycosyl hydrolases family 2 J4T80_06630 PF13287 Fn3 associated J4T80_06630 PF16355 Domain of unknown function (DUF4982) J4T80_06630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4T80_06635 PF07745 Glycosyl hydrolase family 53 J4T80_06645 PF01381 Helix-turn-helix J4T80_06645 PF06114 IrrE N-terminal-like domain J4T80_06645 PF09856 Predicted transcriptional regulator (DUF2083) J4T80_06650 PF00171 Aldehyde dehydrogenase family J4T80_06655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_06655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_06655 PF02770 Acyl-CoA dehydrogenase, middle domain J4T80_06660 PF00378 Enoyl-CoA hydratase/isomerase J4T80_06665 PF00378 Enoyl-CoA hydratase/isomerase J4T80_06665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4T80_06665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4T80_06670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4T80_06670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4T80_06675 PF01545 Cation efflux family J4T80_06695 PF13683 Integrase core domain J4T80_06695 PF13276 HTH-like domain J4T80_06700 PF13683 Integrase core domain J4T80_06700 PF13276 HTH-like domain J4T80_06705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4T80_06705 PF00378 Enoyl-CoA hydratase/isomerase J4T80_06705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4T80_06710 PF04542 Sigma-70 region 2 J4T80_06710 PF08281 Sigma-70, region 4 J4T80_06720 PF13180 PDZ domain J4T80_06725 PF00679 Elongation factor G C-terminus J4T80_06725 PF06421 GTP-binding protein LepA C-terminus J4T80_06725 PF00009 Elongation factor Tu GTP binding domain J4T80_06725 PF03144 Elongation factor Tu domain 2 J4T80_06730 PF10502 Signal peptidase, peptidase S26 J4T80_06740 PF14622 Ribonuclease-III-like J4T80_06740 PF00035 Double-stranded RNA binding motif J4T80_06745 PF01926 50S ribosome-binding GTPase J4T80_06745 PF07650 KH domain J4T80_06750 PF02565 Recombination protein O C terminal J4T80_06750 PF11967 Recombination protein O N terminal J4T80_06760 PF05958 tRNA (Uracil-5-)-methyltransferase J4T80_06765 PF01928 CYTH domain J4T80_06770 PF01323 DSBA-like thioredoxin domain J4T80_06775 PF01593 Flavin containing amine oxidoreductase J4T80_06780 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4T80_06785 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_06790 PF00156 Phosphoribosyl transferase domain J4T80_06795 PF01048 Phosphorylase superfamily J4T80_06800 PF00313 'Cold-shock' DNA-binding domain J4T80_06805 PF01494 FAD binding domain J4T80_06815 PF00270 DEAD/DEAH box helicase J4T80_06815 PF08494 DEAD/H associated J4T80_06815 PF00271 Helicase conserved C-terminal domain J4T80_06820 PF04679 ATP dependent DNA ligase C terminal region J4T80_06820 PF01068 ATP dependent DNA ligase domain J4T80_06820 PF04675 DNA ligase N terminus J4T80_06830 PF04675 DNA ligase N terminus J4T80_06830 PF04679 ATP dependent DNA ligase C terminal region J4T80_06830 PF01068 ATP dependent DNA ligase domain J4T80_06845 PF00072 Response regulator receiver domain J4T80_06845 PF00990 Diguanylate cyclase, GGDEF domain J4T80_06860 PF00108 Thiolase, N-terminal domain J4T80_06860 PF02803 Thiolase, C-terminal domain J4T80_06865 PF12951 Passenger-associated-transport-repeat J4T80_06865 PF00082 Subtilase family J4T80_06865 PF03797 Autotransporter beta-domain J4T80_06870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4T80_06870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4T80_06885 PF01863 Protein of unknown function DUF45 J4T80_06890 PF07043 Protein of unknown function (DUF1328) J4T80_06900 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4T80_06920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T80_06930 PF03831 PhnA domain J4T80_06930 PF08274 PhnA Zinc-Ribbon J4T80_06935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4T80_06940 PF07690 Major Facilitator Superfamily J4T80_06960 PF00872 Transposase, Mutator family J4T80_06985 PF03706 Lysylphosphatidylglycerol synthase TM region J4T80_06985 PF09924 Uncharacterised conserved protein (DUF2156) J4T80_06995 PF01042 Endoribonuclease L-PSP J4T80_07040 PF04542 Sigma-70 region 2 J4T80_07040 PF04545 Sigma-70, region 4 J4T80_07055 PF04060 Putative Fe-S cluster J4T80_07065 PF01588 Putative tRNA binding domain J4T80_07065 PF09334 tRNA synthetases class I (M) J4T80_07080 PF01609 Transposase DDE domain J4T80_07080 PF05598 Transposase domain (DUF772) J4T80_07085 PF13732 Domain of unknown function (DUF4162) J4T80_07085 PF00005 ABC transporter J4T80_07090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4T80_07095 PF00324 Amino acid permease J4T80_07100 PF02574 Homocysteine S-methyltransferase J4T80_07110 PF02592 Putative vitamin uptake transporter J4T80_07130 PF03551 Transcriptional regulator PadR-like family J4T80_07150 PF03653 Uncharacterised protein family (UPF0093) J4T80_07165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4T80_07170 PF14579 Helix-hairpin-helix motif J4T80_07170 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4T80_07170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4T80_07170 PF02811 PHP domain J4T80_07170 PF01336 OB-fold nucleic acid binding domain J4T80_07175 PF01351 Ribonuclease HII J4T80_07180 PF02684 Lipid-A-disaccharide synthetase J4T80_07185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4T80_07185 PF00132 Bacterial transferase hexapeptide (six repeats) J4T80_07190 PF07977 FabA-like domain J4T80_07195 PF00132 Bacterial transferase hexapeptide (six repeats) J4T80_07195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4T80_07205 PF01103 Surface antigen J4T80_07205 PF07244 Surface antigen variable number repeat J4T80_07210 PF17820 PDZ domain J4T80_07210 PF02163 Peptidase family M50 J4T80_07215 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4T80_07215 PF13288 DXP reductoisomerase C-terminal domain J4T80_07215 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4T80_07225 PF01255 Putative undecaprenyl diphosphate synthase J4T80_07230 PF01765 Ribosome recycling factor J4T80_07235 PF00696 Amino acid kinase family J4T80_07240 PF00072 Response regulator receiver domain J4T80_07240 PF00990 Diguanylate cyclase, GGDEF domain J4T80_07245 PF00889 Elongation factor TS J4T80_07250 PF00318 Ribosomal protein S2 J4T80_07285 PF00557 Metallopeptidase family M24 J4T80_07290 PF01966 HD domain J4T80_07290 PF08335 GlnD PII-uridylyltransferase J4T80_07290 PF01909 Nucleotidyltransferase domain J4T80_07295 PF00132 Bacterial transferase hexapeptide (six repeats) J4T80_07295 PF14602 Hexapeptide repeat of succinyl-transferase J4T80_07295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J4T80_07300 PF03960 ArsC family J4T80_07305 PF07687 Peptidase dimerisation domain J4T80_07305 PF01546 Peptidase family M20/M25/M40 J4T80_07310 PF00733 Asparagine synthase J4T80_07310 PF13537 Glutamine amidotransferase domain J4T80_07320 PF07715 TonB-dependent Receptor Plug Domain J4T80_07320 PF00593 TonB dependent receptor J4T80_07325 PF01804 Penicillin amidase J4T80_07330 PF00210 Ferritin-like domain J4T80_07335 PF05724 Thiopurine S-methyltransferase (TPMT) J4T80_07340 PF03989 DNA gyrase C-terminal domain, beta-propeller J4T80_07340 PF00521 DNA gyrase/topoisomerase IV, subunit A J4T80_07355 PF02321 Outer membrane efflux protein J4T80_07360 PF00529 HlyD membrane-fusion protein of T1SS J4T80_07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_07365 PF07690 Major Facilitator Superfamily J4T80_07375 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_07375 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4T80_07375 PF14310 Fibronectin type III-like domain J4T80_07410 PF12802 MarR family J4T80_07415 PF01432 Peptidase family M3 J4T80_07420 PF00255 Glutathione peroxidase J4T80_07425 PF00970 Oxidoreductase FAD-binding domain J4T80_07425 PF00175 Oxidoreductase NAD-binding domain J4T80_07430 PF00005 ABC transporter J4T80_07435 PF05681 Fumarate hydratase (Fumerase) J4T80_07435 PF05683 Fumarase C-terminus J4T80_07445 PF00484 Carbonic anhydrase J4T80_07450 PF02253 Phospholipase A1 J4T80_07460 PF00313 'Cold-shock' DNA-binding domain J4T80_07475 PF00899 ThiF family J4T80_07480 PF01026 TatD related DNase J4T80_07495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_07495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_07495 PF02770 Acyl-CoA dehydrogenase, middle domain J4T80_07505 PF00043 Glutathione S-transferase, C-terminal domain J4T80_07505 PF02798 Glutathione S-transferase, N-terminal domain J4T80_07510 PF13537 Glutamine amidotransferase domain J4T80_07510 PF00733 Asparagine synthase J4T80_07515 PF03358 NADPH-dependent FMN reductase J4T80_07520 PF03796 DnaB-like helicase C terminal domain J4T80_07520 PF00772 DnaB-like helicase N terminal domain J4T80_07525 PF03441 FAD binding domain of DNA photolyase J4T80_07525 PF00875 DNA photolyase J4T80_07530 PF05736 OprF membrane domain J4T80_07530 PF00691 OmpA family J4T80_07535 PF03466 LysR substrate binding domain J4T80_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_07555 PF00873 AcrB/AcrD/AcrF family J4T80_07560 PF00106 short chain dehydrogenase J4T80_07565 PF02321 Outer membrane efflux protein J4T80_07570 PF00990 Diguanylate cyclase, GGDEF domain J4T80_07580 PF00990 Diguanylate cyclase, GGDEF domain J4T80_07595 PF00872 Transposase, Mutator family J4T80_07600 PF13356 Arm DNA-binding domain J4T80_07600 PF00589 Phage integrase family J4T80_07615 PF01668 SmpB protein J4T80_07620 PF03364 Polyketide cyclase / dehydrase and lipid transport J4T80_07625 PF03658 RnfH family Ubiquitin J4T80_07630 PF04355 SmpA / OmlA family J4T80_07635 PF01475 Ferric uptake regulator family J4T80_07640 PF02463 RecF/RecN/SMC N terminal domain J4T80_07645 PF01628 HrcA protein C terminal domain J4T80_07645 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J4T80_07650 PF01025 GrpE J4T80_07655 PF00012 Hsp70 protein J4T80_07660 PF00684 DnaJ central domain J4T80_07660 PF01556 DnaJ C terminal domain J4T80_07660 PF00226 DnaJ domain J4T80_07665 PF08543 Phosphomethylpyrimidine kinase J4T80_07690 PF03412 Peptidase C39 family J4T80_07690 PF00664 ABC transporter transmembrane region J4T80_07690 PF00005 ABC transporter J4T80_07695 PF03466 LysR substrate binding domain J4T80_07695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_07700 PF00005 ABC transporter J4T80_07700 PF00664 ABC transporter transmembrane region J4T80_07705 PF01205 Uncharacterized protein family UPF0029 J4T80_07710 PF03641 Possible lysine decarboxylase J4T80_07715 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_07715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4T80_07720 PF02817 e3 binding domain J4T80_07720 PF00364 Biotin-requiring enzyme J4T80_07720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4T80_07725 PF00676 Dehydrogenase E1 component J4T80_07725 PF16870 2-oxoglutarate dehydrogenase C-terminal J4T80_07725 PF02779 Transketolase, pyrimidine binding domain J4T80_07725 PF16078 2-oxoglutarate dehydrogenase N-terminus J4T80_07735 PF08007 Cupin superfamily protein J4T80_07745 PF08328 Adenylosuccinate lyase C-terminal J4T80_07745 PF00206 Lyase J4T80_07755 PF01595 Cyclin M transmembrane N-terminal domain J4T80_07755 PF00571 CBS domain J4T80_07755 PF03471 Transporter associated domain J4T80_07760 PF10415 Fumarase C C-terminus J4T80_07760 PF00206 Lyase J4T80_07785 PF00005 ABC transporter J4T80_07790 PF00392 Bacterial regulatory proteins, gntR family J4T80_07800 PF00255 Glutathione peroxidase J4T80_07805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4T80_07805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T80_07810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4T80_07810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4T80_07810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4T80_07815 PF04102 SlyX J4T80_07830 PF00356 Bacterial regulatory proteins, lacI family J4T80_07835 PF07690 Major Facilitator Superfamily J4T80_07840 PF00294 pfkB family carbohydrate kinase J4T80_07850 PF02574 Homocysteine S-methyltransferase J4T80_07850 PF00809 Pterin binding enzyme J4T80_07850 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4T80_07850 PF02607 B12 binding domain J4T80_07850 PF02310 B12 binding domain J4T80_07855 PF02574 Homocysteine S-methyltransferase J4T80_07855 PF00809 Pterin binding enzyme J4T80_07860 PF01209 ubiE/COQ5 methyltransferase family J4T80_07865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_07865 PF02770 Acyl-CoA dehydrogenase, middle domain J4T80_07865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_07885 PF00575 S1 RNA binding domain J4T80_07885 PF17876 Cold shock domain J4T80_07885 PF08461 Ribonuclease R winged-helix domain J4T80_07885 PF08206 Ribonuclease B OB domain J4T80_07885 PF00773 RNB domain J4T80_07895 PF00588 SpoU rRNA Methylase family J4T80_07895 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4T80_07905 PF00929 Exonuclease J4T80_07915 PF01895 PhoU domain J4T80_07920 PF00005 ABC transporter J4T80_07925 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_07930 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_07935 PF12849 PBP superfamily domain J4T80_07940 PF12849 PBP superfamily domain J4T80_07955 PF00484 Carbonic anhydrase J4T80_07960 PF01740 STAS domain J4T80_07960 PF00916 Sulfate permease family J4T80_07965 PF00730 HhH-GPD superfamily base excision DNA repair protein J4T80_07965 PF00633 Helix-hairpin-helix motif J4T80_07965 PF10576 Iron-sulfur binding domain of endonuclease III J4T80_07975 PF00378 Enoyl-CoA hydratase/isomerase J4T80_07980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T80_07980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4T80_07985 PF00293 NUDIX domain J4T80_07990 PF00581 Rhodanese-like domain J4T80_08020 PF12848 ABC transporter J4T80_08020 PF00005 ABC transporter J4T80_08020 PF16326 ABC transporter C-terminal domain J4T80_08030 PF10672 S-adenosylmethionine-dependent methyltransferase J4T80_08030 PF01170 Putative RNA methylase family UPF0020 J4T80_08030 PF02926 THUMP domain J4T80_08035 PF01513 ATP-NAD kinase J4T80_08060 PF08411 Exonuclease C-terminal J4T80_08060 PF00929 Exonuclease J4T80_08065 PF01494 FAD binding domain J4T80_08070 PF00266 Aminotransferase class-V J4T80_08080 PF06052 3-hydroxyanthranilic acid dioxygenase J4T80_08085 PF00484 Carbonic anhydrase J4T80_08130 PF00196 Bacterial regulatory proteins, luxR family J4T80_08130 PF00072 Response regulator receiver domain J4T80_08135 PF01609 Transposase DDE domain J4T80_08135 PF05598 Transposase domain (DUF772) J4T80_08145 PF05598 Transposase domain (DUF772) J4T80_08145 PF01609 Transposase DDE domain J4T80_08175 PF01336 OB-fold nucleic acid binding domain J4T80_08175 PF00152 tRNA synthetases class II (D, K and N) J4T80_08180 PF01521 Iron-sulphur cluster biosynthesis J4T80_08185 PF01250 Ribosomal protein S6 J4T80_08190 PF01084 Ribosomal protein S18 J4T80_08195 PF01281 Ribosomal protein L9, N-terminal domain J4T80_08195 PF03948 Ribosomal protein L9, C-terminal domain J4T80_08205 PF02463 RecF/RecN/SMC N terminal domain J4T80_08210 PF04354 ZipA, C-terminal FtsZ-binding domain J4T80_08220 PF00155 Aminotransferase class I and II J4T80_08225 PF01653 NAD-dependent DNA ligase adenylation domain J4T80_08225 PF03120 NAD-dependent DNA ligase OB-fold domain J4T80_08225 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4T80_08225 PF12826 Helix-hairpin-helix motif J4T80_08225 PF00533 BRCA1 C Terminus (BRCT) domain J4T80_08230 PF00152 tRNA synthetases class II (D, K and N) J4T80_08240 PF01008 Initiation factor 2 subunit family J4T80_08245 PF00521 DNA gyrase/topoisomerase IV, subunit A J4T80_08245 PF03989 DNA gyrase C-terminal domain, beta-propeller J4T80_08250 PF13360 PQQ-like domain J4T80_08260 PF17391 Urocanase N-terminal domain J4T80_08260 PF17392 Urocanase C-terminal domain J4T80_08260 PF01175 Urocanase Rossmann-like domain J4T80_08270 PF00221 Aromatic amino acid lyase J4T80_08275 PF07969 Amidohydrolase family J4T80_08285 PF07702 UTRA domain J4T80_08285 PF00392 Bacterial regulatory proteins, gntR family J4T80_08310 PF01794 Ferric reductase like transmembrane component J4T80_08315 PF00174 Oxidoreductase molybdopterin binding domain J4T80_08320 PF00266 Aminotransferase class-V J4T80_08325 PF01842 ACT domain J4T80_08325 PF01817 Chorismate mutase type II J4T80_08325 PF00800 Prephenate dehydratase J4T80_08330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4T80_08340 PF03544 Gram-negative bacterial TonB protein C-terminal J4T80_08345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T80_08345 PF02403 Seryl-tRNA synthetase N-terminal domain J4T80_08350 PF02525 Flavodoxin-like fold J4T80_08355 PF03466 LysR substrate binding domain J4T80_08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_08370 PF05598 Transposase domain (DUF772) J4T80_08370 PF01609 Transposase DDE domain J4T80_08385 PF00672 HAMP domain J4T80_08385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_08385 PF02203 Tar ligand binding domain homologue J4T80_08390 PF01494 FAD binding domain J4T80_08400 PF00512 His Kinase A (phospho-acceptor) domain J4T80_08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_08400 PF08448 PAS fold J4T80_08400 PF13188 PAS domain J4T80_08400 PF00072 Response regulator receiver domain J4T80_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_08405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4T80_08405 PF00072 Response regulator receiver domain J4T80_08405 PF01627 Hpt domain J4T80_08405 PF00512 His Kinase A (phospho-acceptor) domain J4T80_08405 PF00672 HAMP domain J4T80_08410 PF06745 KaiC J4T80_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_08415 PF13426 PAS domain J4T80_08415 PF00072 Response regulator receiver domain J4T80_08425 PF03918 Cytochrome C biogenesis protein J4T80_08430 PF08534 Redoxin J4T80_08435 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4T80_08435 PF01578 Cytochrome C assembly protein J4T80_08440 PF03100 CcmE J4T80_08445 PF04995 Heme exporter protein D (CcmD) J4T80_08450 PF01578 Cytochrome C assembly protein J4T80_08455 PF00082 Subtilase family J4T80_08465 PF04542 Sigma-70 region 2 J4T80_08465 PF08281 Sigma-70, region 4 J4T80_08475 PF00034 Cytochrome c J4T80_08490 PF05523 WxcM-like, C-terminal J4T80_08510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4T80_08515 PF01943 Polysaccharide biosynthesis protein J4T80_08520 PF00535 Glycosyl transferase family 2 J4T80_08535 PF08241 Methyltransferase domain J4T80_08570 PF00005 ABC transporter J4T80_08575 PF00005 ABC transporter J4T80_08575 PF00664 ABC transporter transmembrane region J4T80_08600 PF00571 CBS domain J4T80_08600 PF03471 Transporter associated domain J4T80_08600 PF01595 Cyclin M transmembrane N-terminal domain J4T80_08610 PF01384 Phosphate transporter family J4T80_08625 PF01751 Toprim domain J4T80_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_08625 PF00986 DNA gyrase B subunit, carboxyl terminus J4T80_08625 PF00204 DNA gyrase B J4T80_08635 PF06418 CTP synthase N-terminus J4T80_08635 PF00117 Glutamine amidotransferase class-I J4T80_08640 PF00793 DAHP synthetase I family J4T80_08650 PF03952 Enolase, N-terminal domain J4T80_08650 PF00113 Enolase, C-terminal TIM barrel domain J4T80_08655 PF04977 Septum formation initiator J4T80_08660 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4T80_08665 PF02542 YgbB family J4T80_08670 PF01142 tRNA pseudouridine synthase D (TruD) J4T80_08675 PF01713 Smr domain J4T80_08680 PF01975 Survival protein SurE J4T80_08690 PF09335 SNARE associated Golgi protein J4T80_08695 PF01551 Peptidase family M23 J4T80_08695 PF01476 LysM domain J4T80_08700 PF04430 Protein of unknown function (DUF498/DUF598) J4T80_08705 PF01985 CRS1 / YhbY (CRM) domain J4T80_08710 PF01728 FtsJ-like methyltransferase J4T80_08715 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_08715 PF17862 AAA+ lid domain J4T80_08715 PF06480 FtsH Extracellular J4T80_08715 PF01434 Peptidase family M41 J4T80_08720 PF00809 Pterin binding enzyme J4T80_08730 PF17209 Hfq protein J4T80_08735 PF01926 50S ribosome-binding GTPase J4T80_08735 PF13167 GTP-binding GTPase N-terminal J4T80_08735 PF16360 GTP-binding GTPase Middle Region J4T80_08740 PF02464 Competence-damaged protein J4T80_08745 PF03109 ABC1 family J4T80_08750 PF00717 Peptidase S24-like J4T80_08750 PF01726 LexA DNA binding domain J4T80_08755 PF00154 recA bacterial DNA recombination protein J4T80_08760 PF02631 RecX family J4T80_08765 PF01411 tRNA synthetases class II (A) J4T80_08765 PF02272 DHHA1 domain J4T80_08765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4T80_08770 PF02599 Global regulator protein family J4T80_08780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_08780 PF08447 PAS fold J4T80_08780 PF13426 PAS domain J4T80_08785 PF17954 Quercetinase C-terminal cupin domain J4T80_08785 PF02678 Pirin J4T80_08790 PF03466 LysR substrate binding domain J4T80_08790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_08815 PF08543 Phosphomethylpyrimidine kinase J4T80_08830 PF02562 PhoH-like protein J4T80_08830 PF13638 PIN domain J4T80_08835 PF00578 AhpC/TSA family J4T80_08850 PF00701 Dihydrodipicolinate synthetase family J4T80_08860 PF11953 Domain of unknown function (DUF3470) J4T80_08860 PF00037 4Fe-4S binding domain J4T80_08865 PF05035 2-keto-3-deoxy-galactonokinase J4T80_08870 PF08450 SMP-30/Gluconolactonase/LRE-like region J4T80_08875 PF13378 Enolase C-terminal domain-like J4T80_08875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4T80_08880 PF01081 KDPG and KHG aldolase J4T80_08885 PF03466 LysR substrate binding domain J4T80_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_08900 PF03442 Carbohydrate binding domain X2 J4T80_08900 PF00942 Cellulose binding domain J4T80_08910 PF08532 Beta-galactosidase trimerisation domain J4T80_08910 PF02449 Beta-galactosidase J4T80_08910 PF08533 Beta-galactosidase C-terminal domain J4T80_08915 PF01055 Glycosyl hydrolases family 31 J4T80_08915 PF16338 Domain of unknown function (DUF4968) J4T80_08915 PF17137 Domain of unknown function (DUF5110) J4T80_08925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4T80_08925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4T80_08935 PF00083 Sugar (and other) transporter J4T80_08945 PF00872 Transposase, Mutator family J4T80_08960 PF10566 Glycoside hydrolase 97 J4T80_08960 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J4T80_08960 PF14508 Glycosyl-hydrolase 97 N-terminal J4T80_08970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4T80_08975 PF00686 Starch binding domain J4T80_08975 PF00128 Alpha amylase, catalytic domain J4T80_08980 PF00356 Bacterial regulatory proteins, lacI family J4T80_08985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4T80_08985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T80_08985 PF03129 Anticodon binding domain J4T80_08985 PF02824 TGS domain J4T80_08990 PF00707 Translation initiation factor IF-3, C-terminal domain J4T80_08990 PF05198 Translation initiation factor IF-3, N-terminal domain J4T80_08995 PF01632 Ribosomal protein L35 J4T80_09000 PF00453 Ribosomal protein L20 J4T80_09005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4T80_09005 PF01409 tRNA synthetases class II core domain (F) J4T80_09010 PF03483 B3/4 domain J4T80_09010 PF03484 tRNA synthetase B5 domain J4T80_09010 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4T80_09010 PF03147 Ferredoxin-fold anticodon binding domain J4T80_09010 PF01588 Putative tRNA binding domain J4T80_09015 PF00216 Bacterial DNA-binding protein J4T80_09020 PF13411 MerR HTH family regulatory protein J4T80_09040 PF02397 Bacterial sugar transferase J4T80_09060 PF00534 Glycosyl transferases group 1 J4T80_09060 PF13439 Glycosyltransferase Family 4 J4T80_09070 PF14667 Polysaccharide biosynthesis C-terminal domain J4T80_09085 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4T80_09100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T80_09100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T80_09105 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4T80_09105 PF00753 Metallo-beta-lactamase superfamily J4T80_09110 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J4T80_09130 PF02780 Transketolase, C-terminal domain J4T80_09130 PF02779 Transketolase, pyrimidine binding domain J4T80_09130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4T80_09140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_09140 PF02770 Acyl-CoA dehydrogenase, middle domain J4T80_09140 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4T80_09140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_09150 PF08212 Lipocalin-like domain J4T80_09160 PF00589 Phage integrase family J4T80_09170 PF01609 Transposase DDE domain J4T80_09170 PF05598 Transposase domain (DUF772) J4T80_09185 PF05598 Transposase domain (DUF772) J4T80_09185 PF01609 Transposase DDE domain J4T80_09205 PF01609 Transposase DDE domain J4T80_09205 PF05598 Transposase domain (DUF772) J4T80_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_09235 PF13426 PAS domain J4T80_09235 PF00072 Response regulator receiver domain J4T80_09240 PF04362 Bacterial Fe(2+) trafficking J4T80_09245 PF10576 Iron-sulfur binding domain of endonuclease III J4T80_09245 PF00633 Helix-hairpin-helix motif J4T80_09245 PF00730 HhH-GPD superfamily base excision DNA repair protein J4T80_09245 PF14815 NUDIX domain J4T80_09250 PF02881 SRP54-type protein, helical bundle domain J4T80_09250 PF00448 SRP54-type protein, GTPase domain J4T80_09260 PF05544 Proline racemase J4T80_09265 PF01266 FAD dependent oxidoreductase J4T80_09275 PF04324 BFD-like [2Fe-2S] binding domain J4T80_09275 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_09280 PF00701 Dihydrodipicolinate synthetase family J4T80_09285 PF00171 Aldehyde dehydrogenase family J4T80_09290 PF00557 Metallopeptidase family M24 J4T80_09290 PF01321 Creatinase/Prolidase N-terminal domain J4T80_09305 PF13520 Amino acid permease J4T80_09330 PF09286 Pro-kumamolisin, activation domain J4T80_09330 PF00082 Subtilase family J4T80_09340 PF00593 TonB dependent receptor J4T80_09340 PF07715 TonB-dependent Receptor Plug Domain J4T80_09345 PF07532 Bacterial Ig-like domain (group 4) J4T80_09350 PF04616 Glycosyl hydrolases family 43 J4T80_09375 PF00872 Transposase, Mutator family J4T80_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_09380 PF00183 Hsp90 protein J4T80_09390 PF01467 Cytidylyltransferase-like J4T80_09400 PF00037 4Fe-4S binding domain J4T80_09410 PF02927 Cellulase N-terminal ig-like domain J4T80_09410 PF00759 Glycosyl hydrolase family 9 J4T80_09450 PF02547 Queuosine biosynthesis protein J4T80_09455 PF01702 Queuine tRNA-ribosyltransferase J4T80_09460 PF02699 Preprotein translocase subunit J4T80_09465 PF02355 Protein export membrane protein J4T80_09465 PF13721 SecD export protein N-terminal TM region J4T80_09465 PF07549 SecD/SecF GG Motif J4T80_09470 PF02355 Protein export membrane protein J4T80_09470 PF07549 SecD/SecF GG Motif J4T80_09485 PF01609 Transposase DDE domain J4T80_09485 PF05598 Transposase domain (DUF772) J4T80_09520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4T80_09525 PF00294 pfkB family carbohydrate kinase J4T80_09530 PF00391 PEP-utilising enzyme, mobile domain J4T80_09530 PF02896 PEP-utilising enzyme, TIM barrel domain J4T80_09530 PF00381 PTS HPr component phosphorylation site J4T80_09530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4T80_09530 PF05524 PEP-utilising enzyme, N-terminal J4T80_09535 PF00356 Bacterial regulatory proteins, lacI family J4T80_09540 PF00873 AcrB/AcrD/AcrF family J4T80_09545 PF00529 HlyD membrane-fusion protein of T1SS J4T80_09545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_09555 PF05088 Bacterial NAD-glutamate dehydrogenase J4T80_09565 PF14765 Polyketide synthase dehydratase J4T80_09565 PF00550 Phosphopantetheine attachment site J4T80_09565 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_09565 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_09565 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_09565 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_09565 PF00698 Acyl transferase domain J4T80_09565 PF08659 KR domain J4T80_09570 PF00106 short chain dehydrogenase J4T80_09575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4T80_09580 PF00440 Bacterial regulatory proteins, tetR family J4T80_09590 PF01609 Transposase DDE domain J4T80_09590 PF05598 Transposase domain (DUF772) J4T80_09605 PF07690 Major Facilitator Superfamily J4T80_09615 PF00072 Response regulator receiver domain J4T80_09620 PF00072 Response regulator receiver domain J4T80_09620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4T80_09620 PF00512 His Kinase A (phospho-acceptor) domain J4T80_09620 PF00672 HAMP domain J4T80_09620 PF01627 Hpt domain J4T80_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_09625 PF04286 Protein of unknown function (DUF445) J4T80_09635 PF00202 Aminotransferase class-III J4T80_09640 PF07690 Major Facilitator Superfamily J4T80_09645 PF02634 FdhD/NarQ family J4T80_09650 PF00384 Molybdopterin oxidoreductase J4T80_09660 PF00083 Sugar (and other) transporter J4T80_09660 PF07690 Major Facilitator Superfamily J4T80_09665 PF01814 Hemerythrin HHE cation binding domain J4T80_09670 PF00990 Diguanylate cyclase, GGDEF domain J4T80_09670 PF00072 Response regulator receiver domain J4T80_09675 PF01266 FAD dependent oxidoreductase J4T80_09680 PF00120 Glutamine synthetase, catalytic domain J4T80_09685 PF07722 Peptidase C26 J4T80_09690 PF00120 Glutamine synthetase, catalytic domain J4T80_09700 PF00202 Aminotransferase class-III J4T80_09705 PF13416 Bacterial extracellular solute-binding protein J4T80_09710 PF13533 Biotin-lipoyl like J4T80_09715 PF07690 Major Facilitator Superfamily J4T80_09720 PF02321 Outer membrane efflux protein J4T80_09735 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_09740 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_09745 PF00171 Aldehyde dehydrogenase family J4T80_09760 PF00571 CBS domain J4T80_09760 PF03471 Transporter associated domain J4T80_09770 PF02130 Uncharacterized protein family UPF0054 J4T80_09780 PF02562 PhoH-like protein J4T80_09785 PF04055 Radical SAM superfamily J4T80_09785 PF01938 TRAM domain J4T80_09785 PF00919 Uncharacterized protein family UPF0004 J4T80_09800 PF01464 Transglycosylase SLT domain J4T80_09805 PF00355 Rieske [2Fe-2S] domain J4T80_09805 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4T80_09810 PF00032 Cytochrome b(C-terminal)/b6/petD J4T80_09810 PF00033 Cytochrome b/b6/petB J4T80_09815 PF02167 Cytochrome C1 family J4T80_09820 PF02798 Glutathione S-transferase, N-terminal domain J4T80_09820 PF00043 Glutathione S-transferase, C-terminal domain J4T80_09825 PF04386 Stringent starvation protein B J4T80_09845 PF00271 Helicase conserved C-terminal domain J4T80_09845 PF08494 DEAD/H associated J4T80_09845 PF00270 DEAD/DEAH box helicase J4T80_09850 PF02245 Methylpurine-DNA glycosylase (MPG) J4T80_09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_09855 PF02743 Cache domain J4T80_09855 PF00672 HAMP domain J4T80_09860 PF01584 CheW-like domain J4T80_09890 PF04679 ATP dependent DNA ligase C terminal region J4T80_09890 PF01068 ATP dependent DNA ligase domain J4T80_09890 PF13298 DNA polymerase Ligase (LigD) J4T80_09895 PF01612 3'-5' exonuclease J4T80_09895 PF00570 HRDC domain J4T80_09905 PF03781 Sulfatase-modifying factor enzyme 1 J4T80_09915 PF02601 Exonuclease VII, large subunit J4T80_09915 PF13742 OB-fold nucleic acid binding domain J4T80_09920 PF08331 Domain of unknown function (DUF1730) J4T80_09925 PF01256 Carbohydrate kinase J4T80_09925 PF03853 YjeF-related protein N-terminus J4T80_09930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4T80_09935 PF01520 N-acetylmuramoyl-L-alanine amidase J4T80_09935 PF11741 AMIN domain J4T80_09940 PF08676 MutL C terminal dimerisation domain J4T80_09940 PF01119 DNA mismatch repair protein, C-terminal domain J4T80_09960 PF05233 PHB accumulation regulatory domain J4T80_09960 PF07879 PHB/PHA accumulation regulator DNA-binding domain J4T80_09965 PF00106 short chain dehydrogenase J4T80_09970 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4T80_09975 PF01435 Peptidase family M48 J4T80_09980 PF00563 EAL domain J4T80_09980 PF00990 Diguanylate cyclase, GGDEF domain J4T80_09980 PF00072 Response regulator receiver domain J4T80_09990 PF07152 YaeQ protein J4T80_09995 PF00313 'Cold-shock' DNA-binding domain J4T80_10000 PF02798 Glutathione S-transferase, N-terminal domain J4T80_10000 PF14497 Glutathione S-transferase, C-terminal domain J4T80_10005 PF07859 alpha/beta hydrolase fold J4T80_10010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4T80_10015 PF00156 Phosphoribosyl transferase domain J4T80_10020 PF03880 DbpA RNA binding domain J4T80_10020 PF00271 Helicase conserved C-terminal domain J4T80_10020 PF00270 DEAD/DEAH box helicase J4T80_10025 PF16326 ABC transporter C-terminal domain J4T80_10025 PF00005 ABC transporter J4T80_10025 PF12848 ABC transporter J4T80_10035 PF00545 ribonuclease J4T80_10040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4T80_10040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4T80_10045 PF00459 Inositol monophosphatase family J4T80_10050 PF00588 SpoU rRNA Methylase family J4T80_10060 PF00563 EAL domain J4T80_10060 PF00990 Diguanylate cyclase, GGDEF domain J4T80_10060 PF03707 Bacterial signalling protein N terminal repeat J4T80_10060 PF13188 PAS domain J4T80_10065 PF04055 Radical SAM superfamily J4T80_10070 PF08207 Elongation factor P (EF-P) KOW-like domain J4T80_10070 PF09285 Elongation factor P, C-terminal J4T80_10070 PF01132 Elongation factor P (EF-P) OB domain J4T80_10080 PF01979 Amidohydrolase family J4T80_10090 PF13419 Haloacid dehalogenase-like hydrolase J4T80_10115 PF00295 Glycosyl hydrolases family 28 J4T80_10140 PF00753 Metallo-beta-lactamase superfamily J4T80_10150 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J4T80_10155 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J4T80_10170 PF01551 Peptidase family M23 J4T80_10170 PF08460 Bacterial SH3 domain J4T80_10175 PF01979 Amidohydrolase family J4T80_10180 PF01809 Putative membrane protein insertion efficiency factor J4T80_10185 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4T80_10195 PF02657 Fe-S metabolism associated domain J4T80_10200 PF09190 DALR domain J4T80_10200 PF01406 tRNA synthetases class I (C) catalytic domain J4T80_10210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4T80_10210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4T80_10215 PF00764 Arginosuccinate synthase J4T80_10225 PF07687 Peptidase dimerisation domain J4T80_10225 PF01546 Peptidase family M20/M25/M40 J4T80_10230 PF00696 Amino acid kinase family J4T80_10230 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J4T80_10240 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4T80_10245 PF00206 Lyase J4T80_10255 PF01472 PUA domain J4T80_10255 PF00696 Amino acid kinase family J4T80_10260 PF00171 Aldehyde dehydrogenase family J4T80_10270 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J4T80_10270 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4T80_10290 PF02322 Cytochrome bd terminal oxidase subunit II J4T80_10295 PF01654 Cytochrome bd terminal oxidase subunit I J4T80_10305 PF00664 ABC transporter transmembrane region J4T80_10305 PF00005 ABC transporter J4T80_10310 PF00313 'Cold-shock' DNA-binding domain J4T80_10315 PF00561 alpha/beta hydrolase fold J4T80_10325 PF03918 Cytochrome C biogenesis protein J4T80_10330 PF08534 Redoxin J4T80_10335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4T80_10335 PF01578 Cytochrome C assembly protein J4T80_10340 PF03100 CcmE J4T80_10350 PF01578 Cytochrome C assembly protein J4T80_10355 PF03379 CcmB protein J4T80_10360 PF00005 ABC transporter J4T80_10365 PF00155 Aminotransferase class I and II J4T80_10370 PF00795 Carbon-nitrogen hydrolase J4T80_10385 PF00849 RNA pseudouridylate synthase J4T80_10385 PF01479 S4 domain J4T80_10390 PF04079 Segregation and condensation complex subunit ScpB J4T80_10395 PF02616 Segregation and condensation protein ScpA J4T80_10400 PF03795 YCII-related domain J4T80_10410 PF00356 Bacterial regulatory proteins, lacI family J4T80_10430 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_10435 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_10460 PF00795 Carbon-nitrogen hydrolase J4T80_10465 PF04371 Porphyromonas-type peptidyl-arginine deiminase J4T80_10475 PF00444 Ribosomal protein L36 J4T80_10480 PF02224 Cytidylate kinase J4T80_10485 PF00575 S1 RNA binding domain J4T80_10490 PF00216 Bacterial DNA-binding protein J4T80_10500 PF18073 Rubredoxin metal binding domain J4T80_10505 PF00953 Glycosyl transferase family 4 J4T80_10510 PF02719 Polysaccharide biosynthesis protein J4T80_10515 PF00483 Nucleotidyl transferase J4T80_10520 PF00999 Sodium/hydrogen exchanger family J4T80_10520 PF02254 TrkA-N domain J4T80_10530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4T80_10530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4T80_10535 PF00571 CBS domain J4T80_10535 PF00478 IMP dehydrogenase / GMP reductase domain J4T80_10540 PF00117 Glutamine amidotransferase class-I J4T80_10540 PF00958 GMP synthase C terminal domain J4T80_10540 PF02540 NAD synthase J4T80_10550 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J4T80_10550 PF00361 Proton-conducting membrane transporter J4T80_10550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T80_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_10555 PF03466 LysR substrate binding domain J4T80_10570 PF00196 Bacterial regulatory proteins, luxR family J4T80_10570 PF00072 Response regulator receiver domain J4T80_10580 PF12833 Helix-turn-helix domain J4T80_10585 PF00857 Isochorismatase family J4T80_10595 PF07969 Amidohydrolase family J4T80_10600 PF05977 Transmembrane secretion effector J4T80_10615 PF10414 Sirohaem synthase dimerisation region J4T80_10615 PF14824 Sirohaem biosynthesis protein central J4T80_10615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4T80_10630 PF05974 Domain of unknown function (DUF892) J4T80_10650 PF00563 EAL domain J4T80_10650 PF08448 PAS fold J4T80_10650 PF00990 Diguanylate cyclase, GGDEF domain J4T80_10650 PF08447 PAS fold J4T80_10660 PF12951 Passenger-associated-transport-repeat J4T80_10665 PF00072 Response regulator receiver domain J4T80_10665 PF00196 Bacterial regulatory proteins, luxR family J4T80_10670 PF08448 PAS fold J4T80_10670 PF00072 Response regulator receiver domain J4T80_10670 PF00512 His Kinase A (phospho-acceptor) domain J4T80_10670 PF13426 PAS domain J4T80_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_10680 PF00873 AcrB/AcrD/AcrF family J4T80_10685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_10690 PF00082 Subtilase family J4T80_10690 PF03797 Autotransporter beta-domain J4T80_10700 PF07694 5TMR of 5TMR-LYT J4T80_10700 PF13492 GAF domain J4T80_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_10700 PF06580 Histidine kinase J4T80_10705 PF00072 Response regulator receiver domain J4T80_10705 PF04397 LytTr DNA-binding domain J4T80_10710 PF00144 Beta-lactamase J4T80_10720 PF07995 Glucose / Sorbosone dehydrogenase J4T80_10725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4T80_10740 PF01494 FAD binding domain J4T80_10745 PF13426 PAS domain J4T80_10745 PF07536 HWE histidine kinase J4T80_10745 PF13581 Histidine kinase-like ATPase domain J4T80_10770 PF05114 Protein of unknown function (DUF692) J4T80_10780 PF05598 Transposase domain (DUF772) J4T80_10780 PF01609 Transposase DDE domain J4T80_10795 PF00872 Transposase, Mutator family J4T80_10800 PF14765 Polyketide synthase dehydratase J4T80_10800 PF00698 Acyl transferase domain J4T80_10800 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_10800 PF00107 Zinc-binding dehydrogenase J4T80_10800 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_10800 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_10800 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_10800 PF08659 KR domain J4T80_10800 PF00550 Phosphopantetheine attachment site J4T80_10805 PF03466 LysR substrate binding domain J4T80_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_10815 PF01609 Transposase DDE domain J4T80_10815 PF05598 Transposase domain (DUF772) J4T80_10820 PF00872 Transposase, Mutator family J4T80_10850 PF00501 AMP-binding enzyme J4T80_10850 PF13193 AMP-binding enzyme C-terminal domain J4T80_10850 PF00668 Condensation domain J4T80_10850 PF00550 Phosphopantetheine attachment site J4T80_10855 PF00550 Phosphopantetheine attachment site J4T80_10855 PF00668 Condensation domain J4T80_10855 PF00501 AMP-binding enzyme J4T80_10855 PF13193 AMP-binding enzyme C-terminal domain J4T80_10855 PF00668 Condensation domain J4T80_10855 PF13193 AMP-binding enzyme C-terminal domain J4T80_10855 PF00501 AMP-binding enzyme J4T80_10855 PF00550 Phosphopantetheine attachment site J4T80_10860 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T80_10860 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T80_10870 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_10870 PF14765 Polyketide synthase dehydratase J4T80_10870 PF00550 Phosphopantetheine attachment site J4T80_10870 PF08242 Methyltransferase domain J4T80_10870 PF08659 KR domain J4T80_10870 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_10870 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_10870 PF00550 Phosphopantetheine attachment site J4T80_10870 PF08242 Methyltransferase domain J4T80_10870 PF14765 Polyketide synthase dehydratase J4T80_10870 PF08659 KR domain J4T80_10870 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_10870 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_10870 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_10940 PF14765 Polyketide synthase dehydratase J4T80_10940 PF00550 Phosphopantetheine attachment site J4T80_10940 PF08659 KR domain J4T80_10940 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_10940 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_10940 PF00668 Condensation domain J4T80_10940 PF13193 AMP-binding enzyme C-terminal domain J4T80_10940 PF00501 AMP-binding enzyme J4T80_10940 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_10945 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_10945 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_10950 PF00005 ABC transporter J4T80_10960 PF03621 MbtH-like protein J4T80_10965 PF00975 Thioesterase domain J4T80_10995 PF17091 Inovirus G7P protein J4T80_11055 PF02303 Helix-destabilising protein J4T80_11085 PF00872 Transposase, Mutator family J4T80_11110 PF05857 TraX protein J4T80_11135 PF02303 Helix-destabilising protein J4T80_11170 PF00872 Transposase, Mutator family J4T80_11180 PF05199 GMC oxidoreductase J4T80_11180 PF00732 GMC oxidoreductase J4T80_11185 PF12697 Alpha/beta hydrolase family J4T80_11185 PF08241 Methyltransferase domain J4T80_11230 PF01106 NifU-like domain J4T80_11235 PF01329 Pterin 4 alpha carbinolamine dehydratase J4T80_11245 PF02535 ZIP Zinc transporter J4T80_11250 PF11737 Protein of unknown function (DUF3300) J4T80_11255 PF00849 RNA pseudouridylate synthase J4T80_11255 PF01479 S4 domain J4T80_11260 PF12111 Polyribonucleotide phosphorylase C terminal J4T80_11260 PF00575 S1 RNA binding domain J4T80_11260 PF10150 Ribonuclease E/G family J4T80_11265 PF00196 Bacterial regulatory proteins, luxR family J4T80_11265 PF00072 Response regulator receiver domain J4T80_11270 PF00581 Rhodanese-like domain J4T80_11270 PF17773 UPF0176 acylphosphatase like domain J4T80_11280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T80_11290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4T80_11290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4T80_11290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4T80_11315 PF00872 Transposase, Mutator family J4T80_11330 PF00872 Transposase, Mutator family J4T80_11355 PF01066 CDP-alcohol phosphatidyltransferase J4T80_11360 PF01541 GIY-YIG catalytic domain J4T80_11360 PF02151 UvrB/uvrC motif J4T80_11360 PF08459 UvrC Helix-hairpin-helix N-terminal J4T80_11370 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4T80_11375 PF02348 Cytidylyltransferase J4T80_11380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4T80_11385 PF00664 ABC transporter transmembrane region J4T80_11385 PF00005 ABC transporter J4T80_11390 PF02472 Biopolymer transport protein ExbD/TolR J4T80_11395 PF01618 MotA/TolQ/ExbB proton channel family J4T80_11400 PF03772 Competence protein J4T80_11400 PF00753 Metallo-beta-lactamase superfamily J4T80_11410 PF00005 ABC transporter J4T80_11415 PF12704 MacB-like periplasmic core domain J4T80_11415 PF02687 FtsX-like permease family J4T80_11425 PF03937 Flavinator of succinate dehydrogenase J4T80_11430 PF13085 2Fe-2S iron-sulfur cluster binding domain J4T80_11440 PF00890 FAD binding domain J4T80_11440 PF02910 Fumarate reductase flavoprotein C-term J4T80_11445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4T80_11450 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4T80_11460 PF01571 Aminomethyltransferase folate-binding domain J4T80_11465 PF17912 MalK OB fold domain J4T80_11465 PF00005 ABC transporter J4T80_11470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4T80_11470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4T80_11475 PF02685 Glucokinase J4T80_11480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4T80_11485 PF00920 Dehydratase family J4T80_11490 PF01081 KDPG and KHG aldolase J4T80_11495 PF00873 AcrB/AcrD/AcrF family J4T80_11500 PF00873 AcrB/AcrD/AcrF family J4T80_11505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_11515 PF00034 Cytochrome c J4T80_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_11555 PF00512 His Kinase A (phospho-acceptor) domain J4T80_11555 PF09308 LuxQ, periplasmic J4T80_11555 PF00072 Response regulator receiver domain J4T80_11560 PF17674 HHH domain J4T80_11560 PF00575 S1 RNA binding domain J4T80_11560 PF09371 Tex-like protein N-terminal domain J4T80_11560 PF16921 Tex protein YqgF-like domain J4T80_11570 PF00355 Rieske [2Fe-2S] domain J4T80_11570 PF01266 FAD dependent oxidoreductase J4T80_11585 PF00561 alpha/beta hydrolase fold J4T80_11595 PF01066 CDP-alcohol phosphatidyltransferase J4T80_11615 PF03618 Kinase/pyrophosphorylase J4T80_11620 PF00391 PEP-utilising enzyme, mobile domain J4T80_11620 PF02896 PEP-utilising enzyme, TIM barrel domain J4T80_11620 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4T80_11625 PF00924 Mechanosensitive ion channel J4T80_11625 PF05552 Conserved TM helix J4T80_11630 PF00929 Exonuclease J4T80_11635 PF14437 MafB19-like deaminase J4T80_11640 PF02742 Iron dependent repressor, metal binding and dimerisation domain J4T80_11640 PF01325 Iron dependent repressor, N-terminal DNA binding domain J4T80_11645 PF01566 Natural resistance-associated macrophage protein J4T80_11650 PF00561 alpha/beta hydrolase fold J4T80_11675 PF12804 MobA-like NTP transferase domain J4T80_11680 PF00994 Probable molybdopterin binding domain J4T80_11680 PF03454 MoeA C-terminal region (domain IV) J4T80_11680 PF03453 MoeA N-terminal region (domain I and II) J4T80_11690 PF03372 Endonuclease/Exonuclease/phosphatase family J4T80_11700 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_11700 PF13823 Alcohol dehydrogenase GroES-associated J4T80_11700 PF00107 Zinc-binding dehydrogenase J4T80_11725 PF00899 ThiF family J4T80_11730 PF00994 Probable molybdopterin binding domain J4T80_11730 PF03454 MoeA C-terminal region (domain IV) J4T80_11730 PF03453 MoeA N-terminal region (domain I and II) J4T80_11735 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4T80_11735 PF01926 50S ribosome-binding GTPase J4T80_11740 PF01011 PQQ enzyme repeat J4T80_11740 PF13360 PQQ-like domain J4T80_11750 PF13464 Domain of unknown function (DUF4115) J4T80_11760 PF04055 Radical SAM superfamily J4T80_11765 PF00334 Nucleoside diphosphate kinase J4T80_11775 PF00378 Enoyl-CoA hydratase/isomerase J4T80_11775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4T80_11775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4T80_11780 PF02803 Thiolase, C-terminal domain J4T80_11780 PF00108 Thiolase, N-terminal domain J4T80_11785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4T80_11790 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_11790 PF16193 AAA C-terminal domain J4T80_11790 PF12002 MgsA AAA+ ATPase C terminal J4T80_11800 PF03548 Outer membrane lipoprotein carrier protein LolA J4T80_11810 PF09397 Ftsk gamma domain J4T80_11810 PF17854 FtsK alpha domain J4T80_11810 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4T80_11810 PF01580 FtsK/SpoIIIE family J4T80_11815 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_11825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4T80_11830 PF01176 Translation initiation factor 1A / IF-1 J4T80_11835 PF07724 AAA domain (Cdc48 subfamily) J4T80_11835 PF10431 C-terminal, D2-small domain, of ClpB protein J4T80_11835 PF02861 Clp amino terminal domain, pathogenicity island component J4T80_11835 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_11835 PF17871 AAA lid domain J4T80_11840 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4T80_11845 PF00293 NUDIX domain J4T80_11855 PF04356 Protein of unknown function (DUF489) J4T80_11860 PF00672 HAMP domain J4T80_11860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_11860 PF12729 Four helix bundle sensory module for signal transduction J4T80_11870 PF00990 Diguanylate cyclase, GGDEF domain J4T80_11870 PF00563 EAL domain J4T80_11870 PF03707 Bacterial signalling protein N terminal repeat J4T80_11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_11875 PF07730 Histidine kinase J4T80_11880 PF00563 EAL domain J4T80_11880 PF00990 Diguanylate cyclase, GGDEF domain J4T80_11880 PF03707 Bacterial signalling protein N terminal repeat J4T80_11885 PF13426 PAS domain J4T80_11885 PF13188 PAS domain J4T80_11885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_11885 PF00989 PAS fold J4T80_11885 PF00512 His Kinase A (phospho-acceptor) domain J4T80_11910 PF00072 Response regulator receiver domain J4T80_11910 PF01584 CheW-like domain J4T80_11920 PF00460 Flagella basal body rod protein J4T80_11920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4T80_11925 PF03963 Flagellar hook capping protein - N-terminal region J4T80_11930 PF07559 Flagellar basal body protein FlaE J4T80_11930 PF00460 Flagella basal body rod protein J4T80_11930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4T80_11935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4T80_11935 PF00460 Flagella basal body rod protein J4T80_11940 PF00460 Flagella basal body rod protein J4T80_11940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4T80_11945 PF02107 Flagellar L-ring protein J4T80_11950 PF02119 Flagellar P-ring protein J4T80_11955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4T80_11955 PF10135 Rod binding protein J4T80_11960 PF07196 Flagellin hook IN motif J4T80_11960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4T80_11965 PF00669 Bacterial flagellin N-terminal helical region J4T80_11965 PF00700 Bacterial flagellin C-terminal helical region J4T80_11970 PF00700 Bacterial flagellin C-terminal helical region J4T80_11970 PF00669 Bacterial flagellin N-terminal helical region J4T80_11980 PF07196 Flagellin hook IN motif J4T80_11980 PF07195 Flagellar hook-associated protein 2 C-terminus J4T80_11980 PF02465 Flagellar hook-associated protein 2 N-terminus J4T80_11985 PF02561 Flagellar protein FliS J4T80_12000 PF00072 Response regulator receiver domain J4T80_12000 PF00196 Bacterial regulatory proteins, luxR family J4T80_12005 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4T80_12005 PF04963 Sigma-54 factor, core binding domain J4T80_12005 PF04552 Sigma-54, DNA binding domain J4T80_12010 PF01339 CheB methylesterase J4T80_12010 PF00072 Response regulator receiver domain J4T80_12015 PF06490 Flagellar regulatory protein FleQ J4T80_12015 PF00158 Sigma-54 interaction domain J4T80_12015 PF02954 Bacterial regulatory protein, Fis family J4T80_12020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4T80_12030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T80_12030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T80_12070 PF01609 Transposase DDE domain J4T80_12070 PF05598 Transposase domain (DUF772) J4T80_12080 PF00534 Glycosyl transferases group 1 J4T80_12080 PF00535 Glycosyl transferase family 2 J4T80_12085 PF02049 Flagellar hook-basal body complex protein FliE J4T80_12090 PF01514 Secretory protein of YscJ/FliF family J4T80_12090 PF08345 Flagellar M-ring protein C-terminal J4T80_12095 PF01706 FliG C-terminal domain J4T80_12095 PF14841 FliG middle domain J4T80_12095 PF14842 FliG N-terminal domain J4T80_12105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T80_12105 PF18269 T3SS EscN ATPase C-terminal domain J4T80_12125 PF02154 Flagellar motor switch protein FliM J4T80_12125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4T80_12130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4T80_12135 PF04347 Flagellar biosynthesis protein, FliO J4T80_12140 PF00813 FliP family J4T80_12150 PF01313 Bacterial export proteins, family 3 J4T80_12155 PF01311 Bacterial export proteins, family 1 J4T80_12160 PF00990 Diguanylate cyclase, GGDEF domain J4T80_12165 PF00990 Diguanylate cyclase, GGDEF domain J4T80_12175 PF01312 FlhB HrpN YscU SpaS Family J4T80_12180 PF00771 FHIPEP family J4T80_12185 PF00448 SRP54-type protein, GTPase domain J4T80_12190 PF10609 NUBPL iron-transfer P-loop NTPase J4T80_12195 PF04542 Sigma-70 region 2 J4T80_12195 PF04539 Sigma-70 region 3 J4T80_12195 PF04545 Sigma-70, region 4 J4T80_12200 PF00072 Response regulator receiver domain J4T80_12205 PF04344 Chemotaxis phosphatase, CheZ J4T80_12210 PF00072 Response regulator receiver domain J4T80_12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_12210 PF02895 Signal transducing histidine kinase, homodimeric domain J4T80_12210 PF01584 CheW-like domain J4T80_12210 PF01627 Hpt domain J4T80_12220 PF00872 Transposase, Mutator family J4T80_12240 PF01609 Transposase DDE domain J4T80_12240 PF05598 Transposase domain (DUF772) J4T80_12250 PF01618 MotA/TolQ/ExbB proton channel family J4T80_12255 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4T80_12255 PF00691 OmpA family J4T80_12260 PF13614 AAA domain J4T80_12265 PF01584 CheW-like domain J4T80_12275 PF00072 Response regulator receiver domain J4T80_12280 PF01627 Hpt domain J4T80_12280 PF01584 CheW-like domain J4T80_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_12280 PF02895 Signal transducing histidine kinase, homodimeric domain J4T80_12280 PF09078 CheY binding J4T80_12285 PF00672 HAMP domain J4T80_12285 PF02203 Tar ligand binding domain homologue J4T80_12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12295 PF08269 Cache domain J4T80_12295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12295 PF08269 Cache domain J4T80_12305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12305 PF00672 HAMP domain J4T80_12310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12310 PF00672 HAMP domain J4T80_12310 PF02203 Tar ligand binding domain homologue J4T80_12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12315 PF00672 HAMP domain J4T80_12315 PF02203 Tar ligand binding domain homologue J4T80_12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12325 PF00672 HAMP domain J4T80_12325 PF02203 Tar ligand binding domain homologue J4T80_12330 PF02203 Tar ligand binding domain homologue J4T80_12330 PF00672 HAMP domain J4T80_12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12335 PF00872 Transposase, Mutator family J4T80_12340 PF00672 HAMP domain J4T80_12340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12340 PF02203 Tar ligand binding domain homologue J4T80_12345 PF00672 HAMP domain J4T80_12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12345 PF02203 Tar ligand binding domain homologue J4T80_12360 PF07238 PilZ domain J4T80_12360 PF07317 Flagellar regulator YcgR J4T80_12365 PF01584 CheW-like domain J4T80_12380 PF02203 Tar ligand binding domain homologue J4T80_12380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_12380 PF00672 HAMP domain J4T80_12385 PF01739 CheR methyltransferase, SAM binding domain J4T80_12385 PF03705 CheR methyltransferase, all-alpha domain J4T80_12390 PF03975 CheD chemotactic sensory transduction J4T80_12395 PF00072 Response regulator receiver domain J4T80_12395 PF01339 CheB methylesterase J4T80_12400 PF03707 Bacterial signalling protein N terminal repeat J4T80_12400 PF00990 Diguanylate cyclase, GGDEF domain J4T80_12400 PF00563 EAL domain J4T80_12405 PF00561 alpha/beta hydrolase fold J4T80_12410 PF00330 Aconitase family (aconitate hydratase) J4T80_12410 PF11791 Aconitate B N-terminal domain J4T80_12410 PF06434 Aconitate hydratase 2 N-terminus J4T80_12425 PF00330 Aconitase family (aconitate hydratase) J4T80_12425 PF00694 Aconitase C-terminal domain J4T80_12430 PF00694 Aconitase C-terminal domain J4T80_12430 PF00330 Aconitase family (aconitate hydratase) J4T80_12440 PF13193 AMP-binding enzyme C-terminal domain J4T80_12440 PF00501 AMP-binding enzyme J4T80_12445 PF00378 Enoyl-CoA hydratase/isomerase J4T80_12450 PF01627 Hpt domain J4T80_12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_12450 PF00512 His Kinase A (phospho-acceptor) domain J4T80_12450 PF00072 Response regulator receiver domain J4T80_12455 PF00072 Response regulator receiver domain J4T80_12455 PF01627 Hpt domain J4T80_12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_12455 PF00512 His Kinase A (phospho-acceptor) domain J4T80_12460 PF00072 Response regulator receiver domain J4T80_12465 PF01336 OB-fold nucleic acid binding domain J4T80_12465 PF00152 tRNA synthetases class II (D, K and N) J4T80_12475 PF04397 LytTr DNA-binding domain J4T80_12475 PF00072 Response regulator receiver domain J4T80_12485 PF02272 DHHA1 domain J4T80_12485 PF01368 DHH family J4T80_12485 PF17768 RecJ OB domain J4T80_12495 PF03449 Transcription elongation factor, N-terminal J4T80_12495 PF01272 Transcription elongation factor, GreA/GreB, C-term J4T80_12500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4T80_12500 PF02142 MGS-like domain J4T80_12500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4T80_12510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4T80_12510 PF00117 Glutamine amidotransferase class-I J4T80_12515 PF05173 Dihydrodipicolinate reductase, C-terminus J4T80_12515 PF01113 Dihydrodipicolinate reductase, N-terminus J4T80_12520 PF03473 MOSC domain J4T80_12520 PF03475 3-alpha domain J4T80_12525 PF00155 Aminotransferase class I and II J4T80_12540 PF07670 Nucleoside recognition J4T80_12540 PF02421 Ferrous iron transport protein B J4T80_12540 PF07664 Ferrous iron transport protein B C terminus J4T80_12550 PF00378 Enoyl-CoA hydratase/isomerase J4T80_12560 PF00682 HMGL-like J4T80_12565 PF00106 short chain dehydrogenase J4T80_12570 PF01132 Elongation factor P (EF-P) OB domain J4T80_12570 PF09285 Elongation factor P, C-terminal J4T80_12570 PF08207 Elongation factor P (EF-P) KOW-like domain J4T80_12590 PF02913 FAD linked oxidases, C-terminal domain J4T80_12590 PF01565 FAD binding domain J4T80_12595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4T80_12595 PF01842 ACT domain J4T80_12595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4T80_12605 PF13520 Amino acid permease J4T80_12610 PF13520 Amino acid permease J4T80_12615 PF00596 Class II Aldolase and Adducin N-terminal domain J4T80_12620 PF03079 ARD/ARD' family J4T80_12640 PF01502 Phosphoribosyl-AMP cyclohydrolase J4T80_12640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4T80_12645 PF00977 Histidine biosynthesis protein J4T80_12650 PF00977 Histidine biosynthesis protein J4T80_12655 PF00117 Glutamine amidotransferase class-I J4T80_12660 PF00475 Imidazoleglycerol-phosphate dehydratase J4T80_12665 PF00155 Aminotransferase class I and II J4T80_12670 PF00815 Histidinol dehydrogenase J4T80_12675 PF01634 ATP phosphoribosyltransferase J4T80_12675 PF08029 HisG, C-terminal domain J4T80_12685 PF03129 Anticodon binding domain J4T80_12685 PF13393 Histidyl-tRNA synthetase J4T80_12690 PF00027 Cyclic nucleotide-binding domain J4T80_12690 PF13545 Crp-like helix-turn-helix domain J4T80_12700 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_12700 PF14821 Threonine synthase N terminus J4T80_12710 PF08544 GHMP kinases C terminal J4T80_12710 PF00288 GHMP kinases N terminal domain J4T80_12715 PF00742 Homoserine dehydrogenase J4T80_12715 PF13840 ACT domain J4T80_12715 PF03447 Homoserine dehydrogenase, NAD binding domain J4T80_12715 PF00696 Amino acid kinase family J4T80_12715 PF01842 ACT domain J4T80_12720 PF03073 TspO/MBR family J4T80_12730 PF00872 Transposase, Mutator family J4T80_12740 PF05598 Transposase domain (DUF772) J4T80_12740 PF01609 Transposase DDE domain J4T80_12770 PF17287 POTRA domain J4T80_12770 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4T80_12770 PF08479 POTRA domain, ShlB-type J4T80_12780 PF14883 Hypothetical glycosyl hydrolase family 13 J4T80_12780 PF01522 Polysaccharide deacetylase J4T80_12785 PF00535 Glycosyl transferase family 2 J4T80_12800 PF00171 Aldehyde dehydrogenase family J4T80_12815 PF01180 Dihydroorotate dehydrogenase J4T80_12820 PF01565 FAD binding domain J4T80_12820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4T80_12825 PF00892 EamA-like transporter family J4T80_12830 PF01177 Asp/Glu/Hydantoin racemase J4T80_12850 PF04551 GcpE protein J4T80_12860 PF00072 Response regulator receiver domain J4T80_12865 PF00150 Cellulase (glycosyl hydrolase family 5) J4T80_12865 PF02013 Cellulose or protein binding domain J4T80_12870 PF00563 EAL domain J4T80_12870 PF01590 GAF domain J4T80_12870 PF00990 Diguanylate cyclase, GGDEF domain J4T80_12870 PF00360 Phytochrome region J4T80_12875 PF00474 Sodium:solute symporter family J4T80_12880 PF14310 Fibronectin type III-like domain J4T80_12880 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_12880 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4T80_12900 PF00342 Phosphoglucose isomerase J4T80_12905 PF02261 Aspartate decarboxylase J4T80_12910 PF02569 Pantoate-beta-alanine ligase J4T80_12915 PF02548 Ketopantoate hydroxymethyltransferase J4T80_12920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4T80_12925 PF01743 Poly A polymerase head domain J4T80_12925 PF12626 Polymerase A arginine-rich C-terminus J4T80_12925 PF12627 Probable RNA and SrmB- binding site of polymerase A J4T80_12935 PF02649 Type I GTP cyclohydrolase folE2 J4T80_12940 PF00872 Transposase, Mutator family J4T80_12970 PF01609 Transposase DDE domain J4T80_12970 PF05598 Transposase domain (DUF772) J4T80_13000 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J4T80_13005 PF05101 Type IV secretory pathway, VirB3-like protein J4T80_13015 PF01464 Transglycosylase SLT domain J4T80_13020 PF00437 Type II/IV secretion system protein J4T80_13025 PF03743 Bacterial conjugation TrbI-like protein J4T80_13045 PF02534 Type IV secretory system Conjugative DNA transfer J4T80_13060 PF17757 UvrB interaction domain J4T80_13060 PF04851 Type III restriction enzyme, res subunit J4T80_13060 PF02151 UvrB/uvrC motif J4T80_13060 PF00271 Helicase conserved C-terminal domain J4T80_13060 PF12344 Ultra-violet resistance protein B J4T80_13065 PF07963 Prokaryotic N-terminal methylation motif J4T80_13065 PF00114 Pilin (bacterial filament) J4T80_13080 PF05567 Neisseria PilC beta-propeller domain J4T80_13100 PF07963 Prokaryotic N-terminal methylation motif J4T80_13100 PF00114 Pilin (bacterial filament) J4T80_13105 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4T80_13105 PF03641 Possible lysine decarboxylase J4T80_13105 PF11892 Domain of unknown function (DUF3412) J4T80_13110 PF00593 TonB dependent receptor J4T80_13115 PF01914 MarC family integral membrane protein J4T80_13125 PF00462 Glutaredoxin J4T80_13130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4T80_13130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4T80_13135 PF02222 ATP-grasp domain J4T80_13135 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4T80_13140 PF00731 AIR carboxylase J4T80_13150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4T80_13150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4T80_13160 PF00013 KH domain J4T80_13160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4T80_13160 PF00575 S1 RNA binding domain J4T80_13160 PF01138 3' exoribonuclease family, domain 1 J4T80_13160 PF03725 3' exoribonuclease family, domain 2 J4T80_13165 PF00312 Ribosomal protein S15 J4T80_13170 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4T80_13170 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4T80_13170 PF09157 Pseudouridine synthase II TruB, C-terminal J4T80_13175 PF02033 Ribosome-binding factor A J4T80_13180 PF04760 Translation initiation factor IF-2, N-terminal region J4T80_13180 PF08364 Bacterial translation initiation factor IF-2 associated region J4T80_13180 PF11987 Translation-initiation factor 2 J4T80_13180 PF00009 Elongation factor Tu GTP binding domain J4T80_13185 PF13184 NusA-like KH domain J4T80_13185 PF08529 NusA N-terminal domain J4T80_13185 PF00575 S1 RNA binding domain J4T80_13190 PF02576 RimP N-terminal domain J4T80_13190 PF17384 RimP C-terminal SH3 domain J4T80_13200 PF00361 Proton-conducting membrane transporter J4T80_13205 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J4T80_13205 PF00361 Proton-conducting membrane transporter J4T80_13210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T80_13210 PF00361 Proton-conducting membrane transporter J4T80_13215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4T80_13220 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J4T80_13225 PF12838 4Fe-4S dicluster domain J4T80_13230 PF00146 NADH dehydrogenase J4T80_13235 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J4T80_13235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4T80_13235 PF00384 Molybdopterin oxidoreductase J4T80_13240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4T80_13240 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J4T80_13240 PF10531 SLBB domain J4T80_13250 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J4T80_13255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J4T80_13260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J4T80_13265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J4T80_13280 PF00121 Triosephosphate isomerase J4T80_13285 PF00106 short chain dehydrogenase J4T80_13300 PF00563 EAL domain J4T80_13300 PF00990 Diguanylate cyclase, GGDEF domain J4T80_13300 PF03707 Bacterial signalling protein N terminal repeat J4T80_13315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4T80_13315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4T80_13315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4T80_13315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4T80_13320 PF01039 Carboxyl transferase domain J4T80_13320 PF17848 Acetyl-coA carboxylase zinc finger domain J4T80_13325 PF00290 Tryptophan synthase alpha chain J4T80_13335 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_13340 PF03466 LysR substrate binding domain J4T80_13345 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4T80_13350 PF01416 tRNA pseudouridine synthase J4T80_13365 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4T80_13365 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4T80_13370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4T80_13370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4T80_13375 PF01264 Chorismate synthase J4T80_13380 PF05175 Methyltransferase small domain J4T80_13385 PF02630 SCO1/SenC J4T80_13390 PF02666 Phosphatidylserine decarboxylase J4T80_13400 PF05872 Bacterial protein of unknown function (DUF853) J4T80_13405 PF00293 NUDIX domain J4T80_13420 PF01272 Transcription elongation factor, GreA/GreB, C-term J4T80_13420 PF03449 Transcription elongation factor, N-terminal J4T80_13425 PF04055 Radical SAM superfamily J4T80_13425 PF18693 TRAM domain J4T80_13425 PF00919 Uncharacterized protein family UPF0004 J4T80_13430 PF01609 Transposase DDE domain J4T80_13430 PF05598 Transposase domain (DUF772) J4T80_13440 PF03852 DNA mismatch endonuclease Vsr J4T80_13445 PF00145 C-5 cytosine-specific DNA methylase J4T80_13465 PF01738 Dienelactone hydrolase family J4T80_13485 PF00692 dUTPase J4T80_13490 PF10609 NUBPL iron-transfer P-loop NTPase J4T80_13495 PF07715 TonB-dependent Receptor Plug Domain J4T80_13495 PF00593 TonB dependent receptor J4T80_13510 PF01431 Peptidase family M13 J4T80_13510 PF05649 Peptidase family M13 J4T80_13515 PF01431 Peptidase family M13 J4T80_13515 PF05649 Peptidase family M13 J4T80_13535 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_13535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4T80_13540 PF01266 FAD dependent oxidoreductase J4T80_13545 PF04235 Protein of unknown function (DUF418) J4T80_13550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T80_13555 PF00877 NlpC/P60 family J4T80_13560 PF00877 NlpC/P60 family J4T80_13575 PF00375 Sodium:dicarboxylate symporter family J4T80_13580 PF00245 Alkaline phosphatase J4T80_13585 PF11734 TilS substrate C-terminal domain J4T80_13585 PF09179 TilS substrate binding domain J4T80_13585 PF01171 PP-loop family J4T80_13590 PF02609 Exonuclease VII small subunit J4T80_13595 PF00348 Polyprenyl synthetase J4T80_13600 PF14521 Lysine-specific metallo-endopeptidase J4T80_13610 PF01523 Putative modulator of DNA gyrase J4T80_13615 PF04751 Protein of unknown function (DUF615) J4T80_13620 PF01523 Putative modulator of DNA gyrase J4T80_13630 PF13116 Protein of unknown function J4T80_13630 PF13502 AsmA-like C-terminal region J4T80_13635 PF10150 Ribonuclease E/G family J4T80_13635 PF00575 S1 RNA binding domain J4T80_13640 PF02545 Maf-like protein J4T80_13645 PF04402 Protein of unknown function (DUF541) J4T80_13660 PF02590 Predicted SPOUT methyltransferase J4T80_13675 PF01467 Cytidylyltransferase-like J4T80_13690 PF08264 Anticodon-binding domain of tRNA J4T80_13690 PF13603 Leucyl-tRNA synthetase, Domain 2 J4T80_13690 PF00133 tRNA synthetases class I (I, L, M and V) J4T80_13700 PF00085 Thioredoxin J4T80_13745 PF04070 Domain of unknown function (DUF378) J4T80_13750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4T80_13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_13760 PF03466 LysR substrate binding domain J4T80_13790 PF00664 ABC transporter transmembrane region J4T80_13790 PF00005 ABC transporter J4T80_13800 PF00873 AcrB/AcrD/AcrF family J4T80_13815 PF02321 Outer membrane efflux protein J4T80_13820 PF00072 Response regulator receiver domain J4T80_13820 PF00486 Transcriptional regulatory protein, C terminal J4T80_13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_13825 PF00672 HAMP domain J4T80_13825 PF00512 His Kinase A (phospho-acceptor) domain J4T80_13830 PF00999 Sodium/hydrogen exchanger family J4T80_13835 PF00144 Beta-lactamase J4T80_13840 PF03737 Aldolase/RraA J4T80_13855 PF00990 Diguanylate cyclase, GGDEF domain J4T80_13860 PF00849 RNA pseudouridylate synthase J4T80_13860 PF01479 S4 domain J4T80_13865 PF00990 Diguanylate cyclase, GGDEF domain J4T80_13865 PF08448 PAS fold J4T80_13865 PF00563 EAL domain J4T80_13870 PF00270 DEAD/DEAH box helicase J4T80_13870 PF03880 DbpA RNA binding domain J4T80_13870 PF00271 Helicase conserved C-terminal domain J4T80_13875 PF04542 Sigma-70 region 2 J4T80_13875 PF08281 Sigma-70, region 4 J4T80_13920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4T80_13920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4T80_13930 PF00654 Voltage gated chloride channel J4T80_13935 PF00107 Zinc-binding dehydrogenase J4T80_13935 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_13955 PF07715 TonB-dependent Receptor Plug Domain J4T80_13955 PF00593 TonB dependent receptor J4T80_13965 PF01483 Proprotein convertase P-domain J4T80_13965 PF00082 Subtilase family J4T80_13975 PF00248 Aldo/keto reductase family J4T80_13980 PF07690 Major Facilitator Superfamily J4T80_13985 PF03466 LysR substrate binding domain J4T80_13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_13995 PF12833 Helix-turn-helix domain J4T80_13995 PF06719 AraC-type transcriptional regulator N-terminus J4T80_14005 PF16859 Tetracyclin repressor-like, C-terminal domain J4T80_14005 PF00440 Bacterial regulatory proteins, tetR family J4T80_14010 PF02321 Outer membrane efflux protein J4T80_14015 PF00873 AcrB/AcrD/AcrF family J4T80_14020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_14020 PF00529 HlyD membrane-fusion protein of T1SS J4T80_14030 PF01475 Ferric uptake regulator family J4T80_14035 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4T80_14065 PF00872 Transposase, Mutator family J4T80_14070 PF06123 Inner membrane protein CreD J4T80_14080 PF00672 HAMP domain J4T80_14080 PF00512 His Kinase A (phospho-acceptor) domain J4T80_14080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_14085 PF00072 Response regulator receiver domain J4T80_14085 PF00486 Transcriptional regulatory protein, C terminal J4T80_14090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4T80_14100 PF02559 CarD-like/TRCF domain J4T80_14100 PF00270 DEAD/DEAH box helicase J4T80_14100 PF00271 Helicase conserved C-terminal domain J4T80_14100 PF03461 TRCF domain J4T80_14100 PF17757 UvrB interaction domain J4T80_14110 PF01627 Hpt domain J4T80_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_14110 PF02895 Signal transducing histidine kinase, homodimeric domain J4T80_14110 PF09078 CheY binding J4T80_14110 PF01584 CheW-like domain J4T80_14115 PF00672 HAMP domain J4T80_14115 PF02203 Tar ligand binding domain homologue J4T80_14115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_14120 PF01584 CheW-like domain J4T80_14125 PF00563 EAL domain J4T80_14125 PF00990 Diguanylate cyclase, GGDEF domain J4T80_14125 PF13426 PAS domain J4T80_14130 PF01739 CheR methyltransferase, SAM binding domain J4T80_14130 PF03705 CheR methyltransferase, all-alpha domain J4T80_14135 PF01339 CheB methylesterase J4T80_14135 PF00072 Response regulator receiver domain J4T80_14140 PF13091 PLD-like domain J4T80_14145 PF01431 Peptidase family M13 J4T80_14145 PF05649 Peptidase family M13 J4T80_14155 PF00300 Histidine phosphatase superfamily (branch 1) J4T80_14160 PF04493 Endonuclease V J4T80_14170 PF05726 Pirin C-terminal cupin domain J4T80_14170 PF02678 Pirin J4T80_14185 PF05726 Pirin C-terminal cupin domain J4T80_14185 PF02678 Pirin J4T80_14190 PF13722 5TM C-terminal transporter carbon starvation CstA J4T80_14190 PF02554 Carbon starvation protein CstA J4T80_14195 PF04328 Selenoprotein, putative J4T80_14230 PF02625 XdhC and CoxI family J4T80_14230 PF13478 XdhC Rossmann domain J4T80_14235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4T80_14235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4T80_14240 PF03450 CO dehydrogenase flavoprotein C-terminal domain J4T80_14240 PF00941 FAD binding domain in molybdopterin dehydrogenase J4T80_14245 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4T80_14245 PF01799 [2Fe-2S] binding domain J4T80_14245 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T80_14250 PF00698 Acyl transferase domain J4T80_14250 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_14250 PF00107 Zinc-binding dehydrogenase J4T80_14250 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_14250 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_14250 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_14250 PF08659 KR domain J4T80_14250 PF00550 Phosphopantetheine attachment site J4T80_14250 PF14765 Polyketide synthase dehydratase J4T80_14255 PF00563 EAL domain J4T80_14255 PF01590 GAF domain J4T80_14255 PF00990 Diguanylate cyclase, GGDEF domain J4T80_14255 PF00360 Phytochrome region J4T80_14260 PF00436 Single-strand binding protein family J4T80_14265 PF00348 Polyprenyl synthetase J4T80_14280 PF02875 Mur ligase family, glutamate ligase domain J4T80_14280 PF08245 Mur ligase middle domain J4T80_14295 PF00696 Amino acid kinase family J4T80_14295 PF01842 ACT domain J4T80_14300 PF02567 Phenazine biosynthesis-like protein J4T80_14305 PF02567 Phenazine biosynthesis-like protein J4T80_14315 PF02566 OsmC-like protein J4T80_14320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4T80_14320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4T80_14325 PF03652 Holliday junction resolvase J4T80_14330 PF02622 Uncharacterized ACR, COG1678 J4T80_14335 PF00117 Glutamine amidotransferase class-I J4T80_14335 PF13302 Acetyltransferase (GNAT) domain J4T80_14335 PF00958 GMP synthase C terminal domain J4T80_14335 PF03352 Methyladenine glycosylase J4T80_14335 PF13673 Acetyltransferase (GNAT) domain J4T80_14350 PF00437 Type II/IV secretion system protein J4T80_14355 PF00437 Type II/IV secretion system protein J4T80_14360 PF01168 Alanine racemase, N-terminal domain J4T80_14365 PF03807 NADP oxidoreductase coenzyme F420-dependent J4T80_14365 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4T80_14375 PF01551 Peptidase family M23 J4T80_14395 PF01965 DJ-1/PfpI family J4T80_14405 PF02082 Transcriptional regulator J4T80_14410 PF01458 Uncharacterized protein family (UPF0051) J4T80_14415 PF00005 ABC transporter J4T80_14420 PF01458 Uncharacterized protein family (UPF0051) J4T80_14425 PF00266 Aminotransferase class-V J4T80_14435 PF00355 Rieske [2Fe-2S] domain J4T80_14440 PF07715 TonB-dependent Receptor Plug Domain J4T80_14440 PF00593 TonB dependent receptor J4T80_14445 PF18331 PKHD-type hydroxylase C-terminal domain J4T80_14445 PF13640 2OG-Fe(II) oxygenase superfamily J4T80_14470 PF02424 ApbE family J4T80_14475 PF00667 FAD binding domain J4T80_14475 PF00258 Flavodoxin J4T80_14475 PF00175 Oxidoreductase NAD-binding domain J4T80_14500 PF01636 Phosphotransferase enzyme family J4T80_14505 PF00483 Nucleotidyl transferase J4T80_14510 PF00308 Bacterial dnaA protein J4T80_14515 PF01594 AI-2E family transporter J4T80_14525 PF00586 AIR synthase related protein, N-terminal domain J4T80_14525 PF02769 AIR synthase related protein, C-terminal domain J4T80_14535 PF00551 Formyl transferase J4T80_14555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4T80_14560 PF01722 BolA-like protein J4T80_14565 PF00571 CBS domain J4T80_14565 PF01380 SIS domain J4T80_14580 PF03968 OstA-like protein J4T80_14585 PF00005 ABC transporter J4T80_14590 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4T80_14590 PF04963 Sigma-54 factor, core binding domain J4T80_14590 PF04552 Sigma-54, DNA binding domain J4T80_14595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4T80_14600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4T80_14605 PF07475 HPr Serine kinase C-terminal domain J4T80_14605 PF02603 HPr Serine kinase N terminus J4T80_14610 PF03668 P-loop ATPase protein family J4T80_14620 PF00381 PTS HPr component phosphorylation site J4T80_14625 PF05524 PEP-utilising enzyme, N-terminal J4T80_14625 PF00391 PEP-utilising enzyme, mobile domain J4T80_14625 PF02896 PEP-utilising enzyme, TIM barrel domain J4T80_14630 PF00571 CBS domain J4T80_14630 PF01769 Divalent cation transporter J4T80_14630 PF03448 MgtE intracellular N domain J4T80_14635 PF00756 Putative esterase J4T80_14640 PF02322 Cytochrome bd terminal oxidase subunit II J4T80_14645 PF01654 Cytochrome bd terminal oxidase subunit I J4T80_14655 PF00324 Amino acid permease J4T80_14660 PF00544 Pectate lyase J4T80_14665 PF00872 Transposase, Mutator family J4T80_14670 PF00561 alpha/beta hydrolase fold J4T80_14680 PF00196 Bacterial regulatory proteins, luxR family J4T80_14685 PF00324 Amino acid permease J4T80_14710 PF00239 Resolvase, N terminal domain J4T80_14710 PF02796 Helix-turn-helix domain of resolvase J4T80_14735 PF00872 Transposase, Mutator family J4T80_14745 PF13406 Transglycosylase SLT domain J4T80_14760 PF12706 Beta-lactamase superfamily domain J4T80_14765 PF04820 Tryptophan halogenase J4T80_14805 PF09278 MerR, DNA binding J4T80_14805 PF00376 MerR family regulatory protein J4T80_14810 PF07690 Major Facilitator Superfamily J4T80_14820 PF03738 Glutathionylspermidine synthase preATP-grasp J4T80_14845 PF04012 PspA/IM30 family J4T80_14855 PF01243 Pyridoxamine 5'-phosphate oxidase J4T80_14855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4T80_14860 PF01202 Shikimate kinase J4T80_14865 PF01761 3-dehydroquinate synthase J4T80_14875 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4T80_14880 PF07690 Major Facilitator Superfamily J4T80_14885 PF01627 Hpt domain J4T80_14885 PF00072 Response regulator receiver domain J4T80_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_14885 PF00512 His Kinase A (phospho-acceptor) domain J4T80_14885 PF00672 HAMP domain J4T80_14885 PF17149 Periplasmic sensor domain found in signal transduction proteins J4T80_14890 PF00672 HAMP domain J4T80_14890 PF01627 Hpt domain J4T80_14890 PF00512 His Kinase A (phospho-acceptor) domain J4T80_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_14890 PF17149 Periplasmic sensor domain found in signal transduction proteins J4T80_14890 PF00072 Response regulator receiver domain J4T80_14900 PF01627 Hpt domain J4T80_14900 PF00072 Response regulator receiver domain J4T80_14900 PF00512 His Kinase A (phospho-acceptor) domain J4T80_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_14905 PF04264 YceI-like domain J4T80_14925 PF03313 Serine dehydratase alpha chain J4T80_14925 PF03315 Serine dehydratase beta chain J4T80_14930 PF12697 Alpha/beta hydrolase family J4T80_14935 PF03447 Homoserine dehydrogenase, NAD binding domain J4T80_14935 PF00696 Amino acid kinase family J4T80_14935 PF00742 Homoserine dehydrogenase J4T80_14940 PF01053 Cys/Met metabolism PLP-dependent enzyme J4T80_14945 PF00561 alpha/beta hydrolase fold J4T80_14950 PF01476 LysM domain J4T80_14950 PF08525 Opacity-associated protein A N-terminal motif J4T80_14950 PF01551 Peptidase family M23 J4T80_14955 PF16658 Class II release factor RF3, C-terminal domain J4T80_14955 PF00009 Elongation factor Tu GTP binding domain J4T80_14960 PF03006 Haemolysin-III related J4T80_14965 PF05170 AsmA family J4T80_14970 PF00478 IMP dehydrogenase / GMP reductase domain J4T80_14970 PF00571 CBS domain J4T80_14975 PF00535 Glycosyl transferase family 2 J4T80_14980 PF00912 Transglycosylase J4T80_14985 PF01430 Hsp33 protein J4T80_14995 PF07715 TonB-dependent Receptor Plug Domain J4T80_14995 PF00593 TonB dependent receptor J4T80_15010 PF00872 Transposase, Mutator family J4T80_15020 PF01609 Transposase DDE domain J4T80_15020 PF05598 Transposase domain (DUF772) J4T80_15025 PF00440 Bacterial regulatory proteins, tetR family J4T80_15030 PF00561 alpha/beta hydrolase fold J4T80_15035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4T80_15035 PF09317 Domain of unknown function (DUF1974) J4T80_15035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4T80_15060 PF00872 Transposase, Mutator family J4T80_15080 PF01597 Glycine cleavage H-protein J4T80_15085 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4T80_15085 PF01571 Aminomethyltransferase folate-binding domain J4T80_15105 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J4T80_15110 PF03819 MazG nucleotide pyrophosphohydrolase domain J4T80_15115 PF00459 Inositol monophosphatase family J4T80_15120 PF00293 NUDIX domain J4T80_15125 PF00202 Aminotransferase class-III J4T80_15130 PF04452 RNA methyltransferase J4T80_15135 PF02685 Glucokinase J4T80_15150 PF01476 LysM domain J4T80_15150 PF00704 Glycosyl hydrolases family 18 J4T80_15155 PF02838 Glycosyl hydrolase family 20, domain 2 J4T80_15155 PF07691 PA14 domain J4T80_15155 PF00728 Glycosyl hydrolase family 20, catalytic domain J4T80_15165 PF07691 PA14 domain J4T80_15165 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4T80_15165 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_15165 PF14310 Fibronectin type III-like domain J4T80_15185 PF13520 Amino acid permease J4T80_15195 PF02056 Family 4 glycosyl hydrolase J4T80_15195 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4T80_15205 PF07971 Glycosyl hydrolase family 92 J4T80_15205 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4T80_15210 PF01301 Glycosyl hydrolases family 35 J4T80_15240 PF03932 CutC family J4T80_15245 PF01112 Asparaginase J4T80_15250 PF13302 Acetyltransferase (GNAT) domain J4T80_15265 PF00072 Response regulator receiver domain J4T80_15265 PF01627 Hpt domain J4T80_15265 PF01584 CheW-like domain J4T80_15265 PF02895 Signal transducing histidine kinase, homodimeric domain J4T80_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_15270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_15270 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4T80_15275 PF01584 CheW-like domain J4T80_15280 PF00072 Response regulator receiver domain J4T80_15285 PF00072 Response regulator receiver domain J4T80_15290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4T80_15290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4T80_15300 PF03747 ADP-ribosylglycohydrolase J4T80_15305 PF00814 Glycoprotease family J4T80_15310 PF13307 Helicase C-terminal domain J4T80_15310 PF04851 Type III restriction enzyme, res subunit J4T80_15320 PF00912 Transglycosylase J4T80_15320 PF14814 Bifunctional transglycosylase second domain J4T80_15320 PF00905 Penicillin binding protein transpeptidase domain J4T80_15325 PF00535 Glycosyl transferase family 2 J4T80_15335 PF13291 ACT domain J4T80_15335 PF04607 Region found in RelA / SpoT proteins J4T80_15335 PF02824 TGS domain J4T80_15340 PF08042 PqqA family J4T80_15345 PF12706 Beta-lactamase superfamily domain J4T80_15350 PF03070 TENA/THI-4/PQQC family J4T80_15355 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J4T80_15360 PF04055 Radical SAM superfamily J4T80_15360 PF13186 Iron-sulfur cluster-binding domain J4T80_15375 PF02685 Glucokinase J4T80_15385 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4T80_15385 PF00271 Helicase conserved C-terminal domain J4T80_15385 PF11898 Domain of unknown function (DUF3418) J4T80_15385 PF00270 DEAD/DEAH box helicase J4T80_15385 PF04408 Helicase associated domain (HA2) J4T80_15390 PF00210 Ferritin-like domain J4T80_15395 PF00270 DEAD/DEAH box helicase J4T80_15395 PF00271 Helicase conserved C-terminal domain J4T80_15395 PF09382 RQC domain J4T80_15395 PF16124 RecQ zinc-binding J4T80_15395 PF00570 HRDC domain J4T80_15440 PF00672 HAMP domain J4T80_15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_15440 PF02203 Tar ligand binding domain homologue J4T80_15445 PF01810 LysE type translocator J4T80_15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_15450 PF03466 LysR substrate binding domain J4T80_15460 PF13426 PAS domain J4T80_15460 PF07536 HWE histidine kinase J4T80_15460 PF13581 Histidine kinase-like ATPase domain J4T80_15465 PF06508 Queuosine biosynthesis protein QueC J4T80_15475 PF04055 Radical SAM superfamily J4T80_15485 PF00691 OmpA family J4T80_15490 PF07676 WD40-like Beta Propeller Repeat J4T80_15490 PF04052 TolB amino-terminal domain J4T80_15500 PF02472 Biopolymer transport protein ExbD/TolR J4T80_15505 PF01618 MotA/TolQ/ExbB proton channel family J4T80_15510 PF03061 Thioesterase superfamily J4T80_15515 PF17864 RuvB AAA lid domain J4T80_15515 PF05491 RuvB C-terminal winged helix domain J4T80_15515 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4T80_15520 PF02705 K+ potassium transporter J4T80_15525 PF07499 RuvA, C-terminal domain J4T80_15525 PF01330 RuvA N terminal domain J4T80_15530 PF02075 Crossover junction endodeoxyribonuclease RuvC J4T80_15535 PF01709 Transcriptional regulator J4T80_15550 PF00152 tRNA synthetases class II (D, K and N) J4T80_15550 PF01336 OB-fold nucleic acid binding domain J4T80_15550 PF02938 GAD domain J4T80_15565 PF07690 Major Facilitator Superfamily J4T80_15575 PF05506 Domain of unknown function (DUF756) J4T80_15575 PF04185 Phosphoesterase family J4T80_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_15595 PF03466 LysR substrate binding domain J4T80_15605 PF00005 ABC transporter J4T80_15605 PF12848 ABC transporter J4T80_15610 PF07715 TonB-dependent Receptor Plug Domain J4T80_15610 PF00593 TonB dependent receptor J4T80_15620 PF07715 TonB-dependent Receptor Plug Domain J4T80_15620 PF00593 TonB dependent receptor J4T80_15625 PF07715 TonB-dependent Receptor Plug Domain J4T80_15625 PF00593 TonB dependent receptor J4T80_15630 PF00067 Cytochrome P450 J4T80_15635 PF00999 Sodium/hydrogen exchanger family J4T80_15635 PF02254 TrkA-N domain J4T80_15645 PF07715 TonB-dependent Receptor Plug Domain J4T80_15645 PF07660 Secretin and TonB N terminus short domain J4T80_15645 PF00593 TonB dependent receptor J4T80_15655 PF04183 IucA / IucC family J4T80_15655 PF06276 Ferric iron reductase FhuF-like transporter J4T80_15660 PF07690 Major Facilitator Superfamily J4T80_15665 PF04183 IucA / IucC family J4T80_15665 PF06276 Ferric iron reductase FhuF-like transporter J4T80_15670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4T80_15670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4T80_15685 PF02654 Cobalamin-5-phosphate synthase J4T80_15695 PF02277 Phosphoribosyltransferase J4T80_15700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4T80_15705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4T80_15705 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4T80_15715 PF17113 Regulatory signalling modulator protein AmpE J4T80_15715 PF03186 CobD/Cbib protein J4T80_15720 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4T80_15720 PF12557 Cob(I)alamin adenosyltransferase N terminal J4T80_15740 PF07715 TonB-dependent Receptor Plug Domain J4T80_15740 PF00593 TonB dependent receptor J4T80_15745 PF02861 Clp amino terminal domain, pathogenicity island component J4T80_15745 PF10431 C-terminal, D2-small domain, of ClpB protein J4T80_15745 PF17871 AAA lid domain J4T80_15745 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_15745 PF07724 AAA domain (Cdc48 subfamily) J4T80_15750 PF00005 ABC transporter J4T80_15755 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_15760 PF09084 NMT1/THI5 like J4T80_15765 PF00248 Aldo/keto reductase family J4T80_15770 PF00296 Luciferase-like monooxygenase J4T80_15775 PF07715 TonB-dependent Receptor Plug Domain J4T80_15775 PF00593 TonB dependent receptor J4T80_15780 PF01541 GIY-YIG catalytic domain J4T80_15815 PF07715 TonB-dependent Receptor Plug Domain J4T80_15815 PF00593 TonB dependent receptor J4T80_15820 PF02358 Trehalose-phosphatase J4T80_15825 PF00723 Glycosyl hydrolases family 15 J4T80_15830 PF00982 Glycosyltransferase family 20 J4T80_15835 PF01011 PQQ enzyme repeat J4T80_15840 PF00672 HAMP domain J4T80_15840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_15840 PF02203 Tar ligand binding domain homologue J4T80_15845 PF04134 Protein of unknown function, DUF393 J4T80_15855 PF02578 Multi-copper polyphenol oxidoreductase laccase J4T80_15860 PF00849 RNA pseudouridylate synthase J4T80_15865 PF13525 Outer membrane lipoprotein J4T80_15875 PF02540 NAD synthase J4T80_15875 PF00795 Carbon-nitrogen hydrolase J4T80_15885 PF02629 CoA binding domain J4T80_15885 PF00549 CoA-ligase J4T80_15890 PF08442 ATP-grasp domain J4T80_15890 PF00549 CoA-ligase J4T80_15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_15895 PF00512 His Kinase A (phospho-acceptor) domain J4T80_15900 PF00072 Response regulator receiver domain J4T80_15900 PF00158 Sigma-54 interaction domain J4T80_15900 PF02954 Bacterial regulatory protein, Fis family J4T80_15905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4T80_15905 PF00437 Type II/IV secretion system protein J4T80_15910 PF07963 Prokaryotic N-terminal methylation motif J4T80_15910 PF00114 Pilin (bacterial filament) J4T80_15915 PF01609 Transposase DDE domain J4T80_15915 PF05598 Transposase domain (DUF772) J4T80_15920 PF07963 Prokaryotic N-terminal methylation motif J4T80_15920 PF00114 Pilin (bacterial filament) J4T80_15925 PF00482 Type II secretion system (T2SS), protein F J4T80_15930 PF06750 Bacterial Peptidase A24 N-terminal domain J4T80_15930 PF01478 Type IV leader peptidase family J4T80_15935 PF01121 Dephospho-CoA kinase J4T80_15945 PF00872 Transposase, Mutator family J4T80_15965 PF00989 PAS fold J4T80_15965 PF11808 Phosphate regulon sensor protein PhoR J4T80_15965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_15965 PF00512 His Kinase A (phospho-acceptor) domain J4T80_15970 PF00072 Response regulator receiver domain J4T80_15970 PF00486 Transcriptional regulatory protein, C terminal J4T80_15980 PF08443 RimK-like ATP-grasp domain J4T80_15980 PF18030 RimK PreATP-grasp domain J4T80_15985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4T80_15985 PF00128 Alpha amylase, catalytic domain J4T80_16005 PF00872 Transposase, Mutator family J4T80_16030 PF05598 Transposase domain (DUF772) J4T80_16030 PF01609 Transposase DDE domain J4T80_16050 PF00872 Transposase, Mutator family J4T80_16070 PF05598 Transposase domain (DUF772) J4T80_16070 PF01609 Transposase DDE domain J4T80_16080 PF00872 Transposase, Mutator family J4T80_16085 PF01609 Transposase DDE domain J4T80_16085 PF05598 Transposase domain (DUF772) J4T80_16095 PF00872 Transposase, Mutator family J4T80_16160 PF00657 GDSL-like Lipase/Acylhydrolase J4T80_16160 PF03797 Autotransporter beta-domain J4T80_16170 PF05690 Thiazole biosynthesis protein ThiG J4T80_16175 PF02390 Putative methyltransferase J4T80_16180 PF03600 Citrate transporter J4T80_16180 PF02080 TrkA-C domain J4T80_16195 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4T80_16200 PF01741 Large-conductance mechanosensitive channel, MscL J4T80_16210 PF00356 Bacterial regulatory proteins, lacI family J4T80_16220 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4T80_16220 PF00703 Glycosyl hydrolases family 2 J4T80_16220 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J4T80_16225 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J4T80_16225 PF14508 Glycosyl-hydrolase 97 N-terminal J4T80_16225 PF10566 Glycoside hydrolase 97 J4T80_16230 PF00135 Carboxylesterase family J4T80_16235 PF00588 SpoU rRNA Methylase family J4T80_16235 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4T80_16245 PF11838 ERAP1-like C-terminal domain J4T80_16245 PF01433 Peptidase family M1 domain J4T80_16250 PF00873 AcrB/AcrD/AcrF family J4T80_16255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_16255 PF00529 HlyD membrane-fusion protein of T1SS J4T80_16260 PF00009 Elongation factor Tu GTP binding domain J4T80_16265 PF01507 Phosphoadenosine phosphosulfate reductase family J4T80_16270 PF00667 FAD binding domain J4T80_16270 PF00258 Flavodoxin J4T80_16270 PF00175 Oxidoreductase NAD-binding domain J4T80_16275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4T80_16275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4T80_16280 PF01507 Phosphoadenosine phosphosulfate reductase family J4T80_16305 PF01627 Hpt domain J4T80_16305 PF00072 Response regulator receiver domain J4T80_16305 PF00512 His Kinase A (phospho-acceptor) domain J4T80_16305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_16315 PF03466 LysR substrate binding domain J4T80_16320 PF10414 Sirohaem synthase dimerisation region J4T80_16320 PF14824 Sirohaem biosynthesis protein central J4T80_16320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4T80_16325 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_16335 PF01661 Macro domain J4T80_16340 PF00274 Fructose-bisphosphate aldolase class-I J4T80_16345 PF00224 Pyruvate kinase, barrel domain J4T80_16345 PF02887 Pyruvate kinase, alpha/beta domain J4T80_16350 PF13419 Haloacid dehalogenase-like hydrolase J4T80_16355 PF00162 Phosphoglycerate kinase J4T80_16375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4T80_16375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4T80_16385 PF03922 OmpW family J4T80_16390 PF03922 OmpW family J4T80_16400 PF00753 Metallo-beta-lactamase superfamily J4T80_16400 PF04273 Putative phosphatase (DUF442) J4T80_16410 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_16415 PF00005 ABC transporter J4T80_16415 PF03459 TOBE domain J4T80_16450 PF03734 L,D-transpeptidase catalytic domain J4T80_16450 PF01476 LysM domain J4T80_16455 PF04225 Opacity-associated protein A LysM-like domain J4T80_16455 PF01551 Peptidase family M23 J4T80_16460 PF00593 TonB dependent receptor J4T80_16460 PF07715 TonB-dependent Receptor Plug Domain J4T80_16470 PF00456 Transketolase, thiamine diphosphate binding domain J4T80_16470 PF02779 Transketolase, pyrimidine binding domain J4T80_16470 PF02780 Transketolase, C-terminal domain J4T80_16475 PF00375 Sodium:dicarboxylate symporter family J4T80_16485 PF07584 Aerotolerance regulator N-terminal J4T80_16485 PF00092 von Willebrand factor type A domain J4T80_16505 PF07726 ATPase family associated with various cellular activities (AAA) J4T80_16505 PF17863 AAA lid domain J4T80_16510 PF11741 AMIN domain J4T80_16510 PF00263 Bacterial type II and III secretion system protein J4T80_16510 PF03958 Bacterial type II/III secretion system short domain J4T80_16510 PF07660 Secretin and TonB N terminus short domain J4T80_16515 PF04351 Pilus assembly protein, PilP J4T80_16520 PF04350 Pilus assembly protein, PilO J4T80_16525 PF05137 Fimbrial assembly protein (PilN) J4T80_16530 PF11104 Type IV pilus assembly protein PilM; J4T80_16535 PF17092 Penicillin-binding protein OB-like domain J4T80_16535 PF00912 Transglycosylase J4T80_16535 PF00905 Penicillin binding protein transpeptidase domain J4T80_16545 PF00285 Citrate synthase, C-terminal domain J4T80_16550 PF01197 Ribosomal protein L31 J4T80_16555 PF01156 Inosine-uridine preferring nucleoside hydrolase J4T80_16560 PF00271 Helicase conserved C-terminal domain J4T80_16560 PF17191 RecG wedge domain J4T80_16560 PF00270 DEAD/DEAH box helicase J4T80_16565 PF01042 Endoribonuclease L-PSP J4T80_16570 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J4T80_16570 PF08666 SAF domain J4T80_16575 PF03573 outer membrane porin, OprD family J4T80_16585 PF07690 Major Facilitator Superfamily J4T80_16590 PF00171 Aldehyde dehydrogenase family J4T80_16595 PF00701 Dihydrodipicolinate synthetase family J4T80_16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_16600 PF03466 LysR substrate binding domain J4T80_16605 PF13291 ACT domain J4T80_16605 PF04607 Region found in RelA / SpoT proteins J4T80_16605 PF02824 TGS domain J4T80_16610 PF01192 RNA polymerase Rpb6 J4T80_16615 PF00625 Guanylate kinase J4T80_16620 PF08340 Domain of unknown function (DUF1732) J4T80_16620 PF03755 YicC-like family, N-terminal region J4T80_16625 PF03725 3' exoribonuclease family, domain 2 J4T80_16625 PF01138 3' exoribonuclease family, domain 1 J4T80_16635 PF01725 Ham1 family J4T80_16640 PF06969 HemN C-terminal domain J4T80_16640 PF04055 Radical SAM superfamily J4T80_16655 PF00557 Metallopeptidase family M24 J4T80_16665 PF05195 Aminopeptidase P, N-terminal domain J4T80_16665 PF00557 Metallopeptidase family M24 J4T80_16670 PF03695 Uncharacterised protein family (UPF0149) J4T80_16680 PF05164 Cell division protein ZapA J4T80_16690 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4T80_16700 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4T80_16710 PF13369 Transglutaminase-like superfamily J4T80_16715 PF00301 Rubredoxin J4T80_16720 PF02581 Thiamine monophosphate synthase J4T80_16735 PF00202 Aminotransferase class-III J4T80_16740 PF00196 Bacterial regulatory proteins, luxR family J4T80_16740 PF17874 MalT-like TPR region J4T80_16745 PF00127 Copper binding proteins, plastocyanin/azurin family J4T80_16750 PF00155 Aminotransferase class I and II J4T80_16760 PF00034 Cytochrome c J4T80_16760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4T80_16765 PF01593 Flavin containing amine oxidoreductase J4T80_16780 PF00202 Aminotransferase class-III J4T80_16785 PF00027 Cyclic nucleotide-binding domain J4T80_16785 PF00520 Ion transport protein J4T80_16800 PF01569 PAP2 superfamily J4T80_16805 PF01062 Bestrophin, RFP-TM, chloride channel J4T80_16815 PF01225 Mur ligase family, catalytic domain J4T80_16815 PF08245 Mur ligase middle domain J4T80_16815 PF02875 Mur ligase family, glutamate ligase domain J4T80_16825 PF00365 Phosphofructokinase J4T80_16835 PF03030 Inorganic H+ pyrophosphatase J4T80_16845 PF00719 Inorganic pyrophosphatase J4T80_16855 PF07715 TonB-dependent Receptor Plug Domain J4T80_16855 PF00593 TonB dependent receptor J4T80_16870 PF13667 ThiC-associated domain J4T80_16870 PF01964 Radical SAM ThiC family J4T80_16875 PF07715 TonB-dependent Receptor Plug Domain J4T80_16875 PF00593 TonB dependent receptor J4T80_16880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4T80_16880 PF02203 Tar ligand binding domain homologue J4T80_16880 PF00672 HAMP domain J4T80_16890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4T80_16890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4T80_16895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4T80_16895 PF00205 Thiamine pyrophosphate enzyme, central domain J4T80_16895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4T80_16905 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_16910 PF00682 HMGL-like J4T80_16910 PF08502 LeuA allosteric (dimerisation) domain J4T80_16915 PF00180 Isocitrate/isopropylmalate dehydrogenase J4T80_16920 PF00694 Aconitase C-terminal domain J4T80_16925 PF00330 Aconitase family (aconitate hydratase) J4T80_16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_16935 PF00990 Diguanylate cyclase, GGDEF domain J4T80_16950 PF02321 Outer membrane efflux protein J4T80_16955 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4T80_16960 PF03279 Bacterial lipid A biosynthesis acyltransferase J4T80_16985 PF00390 Malic enzyme, N-terminal domain J4T80_16985 PF03949 Malic enzyme, NAD binding domain J4T80_16985 PF01515 Phosphate acetyl/butaryl transferase J4T80_16990 PF00375 Sodium:dicarboxylate symporter family J4T80_17000 PF02743 Cache domain J4T80_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_17000 PF00512 His Kinase A (phospho-acceptor) domain J4T80_17005 PF07690 Major Facilitator Superfamily J4T80_17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_17015 PF03466 LysR substrate binding domain J4T80_17020 PF00248 Aldo/keto reductase family J4T80_17035 PF00072 Response regulator receiver domain J4T80_17035 PF00196 Bacterial regulatory proteins, luxR family J4T80_17045 PF08521 Two-component sensor kinase N-terminal J4T80_17045 PF00512 His Kinase A (phospho-acceptor) domain J4T80_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_17050 PF00486 Transcriptional regulatory protein, C terminal J4T80_17050 PF00072 Response regulator receiver domain J4T80_17060 PF03600 Citrate transporter J4T80_17065 PF00106 short chain dehydrogenase J4T80_17070 PF00356 Bacterial regulatory proteins, lacI family J4T80_17085 PF00128 Alpha amylase, catalytic domain J4T80_17105 PF03193 RsgA GTPase J4T80_17110 PF00155 Aminotransferase class I and II J4T80_17125 PF01522 Polysaccharide deacetylase J4T80_17130 PF00462 Glutaredoxin J4T80_17145 PF01979 Amidohydrolase family J4T80_17150 PF01979 Amidohydrolase family J4T80_17170 PF05598 Transposase domain (DUF772) J4T80_17170 PF01609 Transposase DDE domain J4T80_17175 PF02645 Uncharacterised protein, DegV family COG1307 J4T80_17180 PF01327 Polypeptide deformylase J4T80_17185 PF03960 ArsC family J4T80_17200 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J4T80_17205 PF01270 Glycosyl hydrolases family 8 J4T80_17210 PF03170 Bacterial cellulose synthase subunit J4T80_17215 PF03552 Cellulose synthase J4T80_17215 PF07238 PilZ domain J4T80_17215 PF00535 Glycosyl transferase family 2 J4T80_17230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4T80_17230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4T80_17265 PF07715 TonB-dependent Receptor Plug Domain J4T80_17265 PF00593 TonB dependent receptor J4T80_17275 PF07702 UTRA domain J4T80_17275 PF00392 Bacterial regulatory proteins, gntR family J4T80_17285 PF03958 Bacterial type II/III secretion system short domain J4T80_17285 PF00263 Bacterial type II and III secretion system protein J4T80_17295 PF10741 Type II secretion system (T2SS), protein M subtype b J4T80_17300 PF05137 Fimbrial assembly protein (PilN) J4T80_17305 PF03934 Type II secretion system (T2SS), protein K J4T80_17315 PF07963 Prokaryotic N-terminal methylation motif J4T80_17320 PF12019 Type II transport protein GspH J4T80_17325 PF08334 Type II secretion system (T2SS), protein G J4T80_17330 PF00482 Type II secretion system (T2SS), protein F J4T80_17335 PF00437 Type II/IV secretion system protein J4T80_17335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4T80_17345 PF13018 Extended Signal Peptide of Type V secretion system J4T80_17345 PF03895 YadA-like membrane anchor domain J4T80_17345 PF05658 Head domain of trimeric autotransporter adhesin J4T80_17345 PF05662 Coiled stalk of trimeric autotransporter adhesin J4T80_17350 PF04151 Bacterial pre-peptidase C-terminal domain J4T80_17350 PF00082 Subtilase family J4T80_17355 PF03895 YadA-like membrane anchor domain J4T80_17355 PF05658 Head domain of trimeric autotransporter adhesin J4T80_17355 PF05662 Coiled stalk of trimeric autotransporter adhesin J4T80_17355 PF13018 Extended Signal Peptide of Type V secretion system J4T80_17360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4T80_17360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4T80_17360 PF02769 AIR synthase related protein, C-terminal domain J4T80_17365 PF10411 Disulfide bond isomerase protein N-terminus J4T80_17365 PF13098 Thioredoxin-like domain J4T80_17370 PF02899 Phage integrase, N-terminal SAM-like domain J4T80_17370 PF00589 Phage integrase family J4T80_17385 PF03739 Lipopolysaccharide export system permease LptF/LptG J4T80_17395 PF00883 Cytosol aminopeptidase family, catalytic domain J4T80_17395 PF02789 Cytosol aminopeptidase family, N-terminal domain J4T80_17410 PF08264 Anticodon-binding domain of tRNA J4T80_17410 PF00133 tRNA synthetases class I (I, L, M and V) J4T80_17410 PF10458 Valyl tRNA synthetase tRNA binding arm J4T80_17415 PF00593 TonB dependent receptor J4T80_17415 PF07715 TonB-dependent Receptor Plug Domain J4T80_17420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4T80_17420 PF01464 Transglycosylase SLT domain J4T80_17425 PF00544 Pectate lyase J4T80_17445 PF01066 CDP-alcohol phosphatidyltransferase J4T80_17455 PF03129 Anticodon binding domain J4T80_17455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T80_17455 PF04073 Aminoacyl-tRNA editing domain J4T80_17460 PF00816 H-NS histone family J4T80_17470 PF02405 Permease MlaE J4T80_17475 PF00005 ABC transporter J4T80_17480 PF03886 ABC-type transport auxiliary lipoprotein component J4T80_17480 PF02470 MlaD protein J4T80_17500 PF01144 Coenzyme A transferase J4T80_17505 PF01144 Coenzyme A transferase J4T80_17510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4T80_17510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4T80_17510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4T80_17510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4T80_17515 PF01050 Mannose-6-phosphate isomerase J4T80_17515 PF00483 Nucleotidyl transferase J4T80_17520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4T80_17520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4T80_17520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4T80_17525 PF04321 RmlD substrate binding domain J4T80_17530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4T80_17535 PF00483 Nucleotidyl transferase J4T80_17540 PF16363 GDP-mannose 4,6 dehydratase J4T80_17545 PF01012 Electron transfer flavoprotein domain J4T80_17550 PF01012 Electron transfer flavoprotein domain J4T80_17550 PF00766 Electron transfer flavoprotein FAD-binding domain J4T80_17560 PF00535 Glycosyl transferase family 2 J4T80_17570 PF01593 Flavin containing amine oxidoreductase J4T80_17590 PF16363 GDP-mannose 4,6 dehydratase J4T80_17595 PF16363 GDP-mannose 4,6 dehydratase J4T80_17600 PF13477 Glycosyl transferase 4-like J4T80_17600 PF00534 Glycosyl transferases group 1 J4T80_17605 PF13847 Methyltransferase domain J4T80_17605 PF00069 Protein kinase domain J4T80_17610 PF00005 ABC transporter J4T80_17620 PF13439 Glycosyltransferase Family 4 J4T80_17620 PF00534 Glycosyl transferases group 1 J4T80_17625 PF01053 Cys/Met metabolism PLP-dependent enzyme J4T80_17630 PF00571 CBS domain J4T80_17630 PF00291 Pyridoxal-phosphate dependent enzyme J4T80_17650 PF00437 Type II/IV secretion system protein J4T80_17655 PF02798 Glutathione S-transferase, N-terminal domain J4T80_17655 PF14497 Glutathione S-transferase, C-terminal domain J4T80_17665 PF00271 Helicase conserved C-terminal domain J4T80_17665 PF00270 DEAD/DEAH box helicase J4T80_17675 PF07715 TonB-dependent Receptor Plug Domain J4T80_17675 PF00593 TonB dependent receptor J4T80_17680 PF01242 6-pyruvoyl tetrahydropterin synthase J4T80_17710 PF13185 GAF domain J4T80_17720 PF00756 Putative esterase J4T80_17725 PF07715 TonB-dependent Receptor Plug Domain J4T80_17725 PF00593 TonB dependent receptor J4T80_17730 PF13419 Haloacid dehalogenase-like hydrolase J4T80_17735 PF00817 impB/mucB/samB family J4T80_17735 PF11799 impB/mucB/samB family C-terminal domain J4T80_17740 PF07977 FabA-like domain J4T80_17745 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_17745 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_17755 PF01432 Peptidase family M3 J4T80_17770 PF00394 Multicopper oxidase J4T80_17770 PF07731 Multicopper oxidase J4T80_17770 PF07732 Multicopper oxidase J4T80_17775 PF05275 Copper resistance protein B precursor (CopB) J4T80_17780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4T80_17805 PF01380 SIS domain J4T80_17810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_17815 PF00005 ABC transporter J4T80_17820 PF02687 FtsX-like permease family J4T80_17820 PF12704 MacB-like periplasmic core domain J4T80_17825 PF00005 ABC transporter J4T80_17825 PF02687 FtsX-like permease family J4T80_17825 PF12704 MacB-like periplasmic core domain J4T80_17835 PF00072 Response regulator receiver domain J4T80_17835 PF00158 Sigma-54 interaction domain J4T80_17835 PF02954 Bacterial regulatory protein, Fis family J4T80_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_17840 PF00512 His Kinase A (phospho-acceptor) domain J4T80_17845 PF00132 Bacterial transferase hexapeptide (six repeats) J4T80_17845 PF14602 Hexapeptide repeat of succinyl-transferase J4T80_17845 PF12804 MobA-like NTP transferase domain J4T80_17860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4T80_17860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4T80_17865 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4T80_17865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T80_17870 PF00231 ATP synthase J4T80_17875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T80_17875 PF00306 ATP synthase alpha/beta chain, C terminal domain J4T80_17875 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4T80_17880 PF00213 ATP synthase delta (OSCP) subunit J4T80_17885 PF00430 ATP synthase B/B' CF(0) J4T80_17890 PF00137 ATP synthase subunit C J4T80_17895 PF00119 ATP synthase A chain J4T80_17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_17915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4T80_17925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4T80_17925 PF00364 Biotin-requiring enzyme J4T80_17925 PF02817 e3 binding domain J4T80_17955 PF03180 NLPA lipoprotein J4T80_17960 PF00528 Binding-protein-dependent transport system inner membrane component J4T80_17965 PF00005 ABC transporter J4T80_17965 PF09383 NIL domain J4T80_17970 PF00892 EamA-like transporter family J4T80_17975 PF04461 Protein of unknown function (DUF520) J4T80_17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_17985 PF00512 His Kinase A (phospho-acceptor) domain J4T80_17985 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4T80_17985 PF01627 Hpt domain J4T80_17985 PF00989 PAS fold J4T80_17985 PF00072 Response regulator receiver domain J4T80_18010 PF00849 RNA pseudouridylate synthase J4T80_18010 PF01479 S4 domain J4T80_18015 PF08468 Methyltransferase small domain N-terminal J4T80_18015 PF05175 Methyltransferase small domain J4T80_18025 PF07995 Glucose / Sorbosone dehydrogenase J4T80_18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_18035 PF00512 His Kinase A (phospho-acceptor) domain J4T80_18035 PF00989 PAS fold J4T80_18055 PF00842 Alanine racemase, C-terminal domain J4T80_18055 PF01168 Alanine racemase, N-terminal domain J4T80_18060 PF01266 FAD dependent oxidoreductase J4T80_18065 PF01037 Lrp/AsnC ligand binding domain J4T80_18075 PF01641 SelR domain J4T80_18085 PF01618 MotA/TolQ/ExbB proton channel family J4T80_18090 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4T80_18090 PF00691 OmpA family J4T80_18115 PF01061 ABC-2 type transporter J4T80_18120 PF00005 ABC transporter J4T80_18125 PF00999 Sodium/hydrogen exchanger family J4T80_18130 PF02469 Fasciclin domain J4T80_18135 PF03167 Uracil DNA glycosylase superfamily J4T80_18145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4T80_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_18155 PF03466 LysR substrate binding domain J4T80_18160 PF03358 NADPH-dependent FMN reductase J4T80_18165 PF00248 Aldo/keto reductase family J4T80_18175 PF01431 Peptidase family M13 J4T80_18175 PF05649 Peptidase family M13 J4T80_18190 PF13520 Amino acid permease J4T80_18200 PF04397 LytTr DNA-binding domain J4T80_18200 PF00072 Response regulator receiver domain J4T80_18205 PF06580 Histidine kinase J4T80_18205 PF02743 Cache domain J4T80_18205 PF00672 HAMP domain J4T80_18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_18220 PF05974 Domain of unknown function (DUF892) J4T80_18225 PF05067 Manganese containing catalase J4T80_18245 PF08448 PAS fold J4T80_18245 PF03705 CheR methyltransferase, all-alpha domain J4T80_18245 PF01339 CheB methylesterase J4T80_18245 PF01739 CheR methyltransferase, SAM binding domain J4T80_18260 PF00158 Sigma-54 interaction domain J4T80_18260 PF00072 Response regulator receiver domain J4T80_18260 PF02954 Bacterial regulatory protein, Fis family J4T80_18270 PF01654 Cytochrome bd terminal oxidase subunit I J4T80_18275 PF02322 Cytochrome bd terminal oxidase subunit II J4T80_18295 PF16363 GDP-mannose 4,6 dehydratase J4T80_18305 PF03275 UDP-galactopyranose mutase J4T80_18315 PF01609 Transposase DDE domain J4T80_18315 PF05598 Transposase domain (DUF772) J4T80_18325 PF00005 ABC transporter J4T80_18325 PF00664 ABC transporter transmembrane region J4T80_18340 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_18340 PF13823 Alcohol dehydrogenase GroES-associated J4T80_18340 PF00107 Zinc-binding dehydrogenase J4T80_18385 PF00593 TonB dependent receptor J4T80_18385 PF07715 TonB-dependent Receptor Plug Domain J4T80_18400 PF00005 ABC transporter J4T80_18410 PF03466 LysR substrate binding domain J4T80_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_18415 PF01042 Endoribonuclease L-PSP J4T80_18445 PF03466 LysR substrate binding domain J4T80_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_18450 PF02525 Flavodoxin-like fold J4T80_18470 PF05598 Transposase domain (DUF772) J4T80_18470 PF01609 Transposase DDE domain J4T80_18475 PF05598 Transposase domain (DUF772) J4T80_18475 PF01609 Transposase DDE domain J4T80_18495 PF01740 STAS domain J4T80_18495 PF00916 Sulfate permease family J4T80_18505 PF00557 Metallopeptidase family M24 J4T80_18555 PF00872 Transposase, Mutator family J4T80_18575 PF00140 Sigma-70 factor, region 1.2 J4T80_18575 PF03979 Sigma-70 factor, region 1.1 J4T80_18575 PF04542 Sigma-70 region 2 J4T80_18575 PF04539 Sigma-70 region 3 J4T80_18575 PF04546 Sigma-70, non-essential region J4T80_18575 PF04545 Sigma-70, region 4 J4T80_18580 PF02580 D-Tyr-tRNA(Tyr) deacylase J4T80_18585 PF03279 Bacterial lipid A biosynthesis acyltransferase J4T80_18600 PF00925 GTP cyclohydrolase II J4T80_18620 PF00535 Glycosyl transferase family 2 J4T80_18635 PF01029 NusB family J4T80_18635 PF01189 16S rRNA methyltransferase RsmB/F J4T80_18640 PF02911 Formyl transferase, C-terminal domain J4T80_18640 PF00551 Formyl transferase J4T80_18645 PF01327 Polypeptide deformylase J4T80_18650 PF01476 LysM domain J4T80_18655 PF17782 DprA winged helix domain J4T80_18655 PF02481 DNA recombination-mediator protein A J4T80_18660 PF04361 Protein of unknown function (DUF494) J4T80_18665 PF07963 Prokaryotic N-terminal methylation motif J4T80_18665 PF00114 Pilin (bacterial filament) J4T80_18675 PF01131 DNA topoisomerase J4T80_18675 PF01751 Toprim domain J4T80_18675 PF13368 Topoisomerase C-terminal repeat J4T80_18680 PF01300 Telomere recombination J4T80_18705 PF01343 Peptidase family S49 J4T80_18710 PF01554 MatE J4T80_18730 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4T80_18730 PF18074 Primosomal protein N C-terminal domain J4T80_18730 PF00270 DEAD/DEAH box helicase J4T80_18730 PF00271 Helicase conserved C-terminal domain J4T80_18730 PF17764 3′ DNA-binding domain (3′BD) J4T80_18735 PF00043 Glutathione S-transferase, C-terminal domain J4T80_18735 PF13417 Glutathione S-transferase, N-terminal domain J4T80_18750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T80_18760 PF04545 Sigma-70, region 4 J4T80_18760 PF04542 Sigma-70 region 2 J4T80_18765 PF03167 Uracil DNA glycosylase superfamily J4T80_18770 PF01339 CheB methylesterase J4T80_18770 PF00072 Response regulator receiver domain J4T80_18775 PF18075 FtsX extracellular domain J4T80_18780 PF00005 ABC transporter J4T80_18785 PF00270 DEAD/DEAH box helicase J4T80_18785 PF00271 Helicase conserved C-terminal domain J4T80_18785 PF12300 ATP-dependent RNA helicase RhlB J4T80_18790 PF00085 Thioredoxin J4T80_18795 PF07497 Rho termination factor, RNA-binding domain J4T80_18795 PF07498 Rho termination factor, N-terminal domain J4T80_18795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T80_18800 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J4T80_18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_18805 PF03466 LysR substrate binding domain J4T80_18815 PF03971 Monomeric isocitrate dehydrogenase J4T80_18825 PF04972 BON domain J4T80_18825 PF01476 LysM domain J4T80_18830 PF14489 QueF-like protein J4T80_18830 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4T80_18835 PF07687 Peptidase dimerisation domain J4T80_18835 PF01546 Peptidase family M20/M25/M40 J4T80_18840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_18845 PF00873 AcrB/AcrD/AcrF family J4T80_18850 PF00873 AcrB/AcrD/AcrF family J4T80_18865 PF07063 Domain of unknown function (DUF1338) J4T80_18890 PF01609 Transposase DDE domain J4T80_18890 PF05598 Transposase domain (DUF772) J4T80_18910 PF01427 D-ala-D-ala dipeptidase J4T80_18915 PF01510 N-acetylmuramoyl-L-alanine amidase J4T80_18925 PF13378 Enolase C-terminal domain-like J4T80_18925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4T80_18935 PF13520 Amino acid permease J4T80_18955 PF07995 Glucose / Sorbosone dehydrogenase J4T80_18960 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4T80_18960 PF14310 Fibronectin type III-like domain J4T80_18960 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_18965 PF02152 Dihydroneopterin aldolase J4T80_18970 PF00814 Glycoprotease family J4T80_18975 PF01165 Ribosomal protein S21 J4T80_18980 PF09424 Yqey-like protein J4T80_18985 PF03631 Virulence factor BrkB J4T80_18990 PF10410 DnaB-helicase binding domain of primase J4T80_18990 PF08278 DNA primase DnaG DnaB-binding J4T80_18990 PF08275 DNA primase catalytic core, N-terminal domain J4T80_18990 PF01807 CHC2 zinc finger J4T80_18995 PF13593 SBF-like CPA transporter family (DUF4137) J4T80_19005 PF01040 UbiA prenyltransferase family J4T80_19030 PF00510 Cytochrome c oxidase subunit III J4T80_19035 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4T80_19045 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4T80_19050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4T80_19050 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4T80_19060 PF00171 Aldehyde dehydrogenase family J4T80_19060 PF01619 Proline dehydrogenase J4T80_19060 PF14850 DNA-binding domain of Proline dehydrogenase J4T80_19060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4T80_19090 PF00579 tRNA synthetases class I (W and Y) J4T80_19095 PF01551 Peptidase family M23 J4T80_19095 PF04225 Opacity-associated protein A LysM-like domain J4T80_19100 PF03702 Anhydro-N-acetylmuramic acid kinase J4T80_19110 PF07690 Major Facilitator Superfamily J4T80_19115 PF03372 Endonuclease/Exonuclease/phosphatase family J4T80_19120 PF00156 Phosphoribosyl transferase domain J4T80_19130 PF13614 AAA domain J4T80_19135 PF17762 HTH domain found in ParB protein J4T80_19135 PF02195 ParB-like nuclease domain J4T80_19145 PF01370 NAD dependent epimerase/dehydratase family J4T80_19150 PF00535 Glycosyl transferase family 2 J4T80_19160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4T80_19160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4T80_19160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4T80_19160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4T80_19165 PF00692 dUTPase J4T80_19170 PF04127 DNA / pantothenate metabolism flavoprotein J4T80_19170 PF02441 Flavoprotein J4T80_19175 PF04002 RadC-like JAB domain J4T80_19180 PF03485 Arginyl tRNA synthetase N terminal domain J4T80_19180 PF05746 DALR anticodon binding domain J4T80_19180 PF00750 tRNA synthetases class I (R) J4T80_19195 PF00106 short chain dehydrogenase J4T80_19200 PF01757 Acyltransferase family J4T80_19205 PF03033 Glycosyltransferase family 28 N-terminal domain J4T80_19215 PF17810 Arginine decarboxylase helical bundle domain J4T80_19215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4T80_19215 PF17944 Arginine decarboxylase C-terminal helical extension J4T80_19220 PF17284 Spermidine synthase tetramerisation domain J4T80_19240 PF07555 beta-N-acetylglucosaminidase J4T80_19240 PF00963 Cohesin domain J4T80_19240 PF00754 F5/8 type C domain J4T80_19240 PF00041 Fibronectin type III domain J4T80_19240 PF02838 Glycosyl hydrolase family 20, domain 2 J4T80_19245 PF00543 Nitrogen regulatory protein P-II J4T80_19250 PF04380 Membrane fusogenic activity J4T80_19255 PF01078 Magnesium chelatase, subunit ChlI J4T80_19255 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4T80_19270 PF12792 CSS motif domain associated with EAL J4T80_19270 PF00563 EAL domain J4T80_19275 PF00487 Fatty acid desaturase J4T80_19280 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T80_19280 PF00970 Oxidoreductase FAD-binding domain J4T80_19280 PF00175 Oxidoreductase NAD-binding domain J4T80_19285 PF00440 Bacterial regulatory proteins, tetR family J4T80_19295 PF01139 tRNA-splicing ligase RtcB J4T80_19330 PF08338 Domain of unknown function (DUF1731) J4T80_19330 PF01370 NAD dependent epimerase/dehydratase family J4T80_19335 PF00072 Response regulator receiver domain J4T80_19335 PF00486 Transcriptional regulatory protein, C terminal J4T80_19340 PF08521 Two-component sensor kinase N-terminal J4T80_19340 PF00512 His Kinase A (phospho-acceptor) domain J4T80_19340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_19360 PF00595 PDZ domain J4T80_19380 PF01594 AI-2E family transporter J4T80_19385 PF13419 Haloacid dehalogenase-like hydrolase J4T80_19390 PF00883 Cytosol aminopeptidase family, catalytic domain J4T80_19390 PF02789 Cytosol aminopeptidase family, N-terminal domain J4T80_19395 PF00872 Transposase, Mutator family J4T80_19405 PF00199 Catalase J4T80_19420 PF00196 Bacterial regulatory proteins, luxR family J4T80_19420 PF00072 Response regulator receiver domain J4T80_19425 PF07730 Histidine kinase J4T80_19430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_19435 PF00005 ABC transporter J4T80_19455 PF00892 EamA-like transporter family J4T80_19460 PF00892 EamA-like transporter family J4T80_19480 PF00753 Metallo-beta-lactamase superfamily J4T80_19485 PF00579 tRNA synthetases class I (W and Y) J4T80_19490 PF05532 CsbD-like J4T80_19505 PF00491 Arginase family J4T80_19530 PF02223 Thymidylate kinase J4T80_19550 PF03309 Type III pantothenate kinase J4T80_19555 PF03099 Biotin/lipoate A/B protein ligase family J4T80_19555 PF08279 HTH domain J4T80_19555 PF02237 Biotin protein ligase C terminal domain J4T80_19565 PF06167 Glucose-regulated metallo-peptidase M90 J4T80_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_19585 PF00072 Response regulator receiver domain J4T80_19585 PF00486 Transcriptional regulatory protein, C terminal J4T80_19595 PF01207 Dihydrouridine synthase (Dus) J4T80_19610 PF06628 Catalase-related immune-responsive J4T80_19610 PF00199 Catalase J4T80_19620 PF06733 DEAD_2 J4T80_19620 PF13307 Helicase C-terminal domain J4T80_19635 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4T80_19635 PF01488 Shikimate / quinate 5-dehydrogenase J4T80_19635 PF08501 Shikimate dehydrogenase substrate binding domain J4T80_19650 PF00667 FAD binding domain J4T80_19650 PF00258 Flavodoxin J4T80_19650 PF00175 Oxidoreductase NAD-binding domain J4T80_19660 PF03466 LysR substrate binding domain J4T80_19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_19675 PF00490 Delta-aminolevulinic acid dehydratase J4T80_19700 PF00872 Transposase, Mutator family J4T80_19705 PF00326 Prolyl oligopeptidase family J4T80_19705 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J4T80_19710 PF02798 Glutathione S-transferase, N-terminal domain J4T80_19710 PF00043 Glutathione S-transferase, C-terminal domain J4T80_19730 PF04820 Tryptophan halogenase J4T80_19745 PF00005 ABC transporter J4T80_19755 PF01381 Helix-turn-helix J4T80_19765 PF01229 Glycosyl hydrolases family 39 J4T80_19770 PF02583 Metal-sensitive transcriptional repressor J4T80_19775 PF01545 Cation efflux family J4T80_19785 PF00593 TonB dependent receptor J4T80_19785 PF07715 TonB-dependent Receptor Plug Domain J4T80_19795 PF12833 Helix-turn-helix domain J4T80_19795 PF01965 DJ-1/PfpI family J4T80_19800 PF00175 Oxidoreductase NAD-binding domain J4T80_19800 PF01383 CpcD/allophycocyanin linker domain J4T80_19805 PF00005 ABC transporter J4T80_19810 PF01061 ABC-2 type transporter J4T80_19815 PF02558 Ketopantoate reductase PanE/ApbA J4T80_19815 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4T80_19845 PF00268 Ribonucleotide reductase, small chain J4T80_19850 PF02867 Ribonucleotide reductase, barrel domain J4T80_19850 PF00317 Ribonucleotide reductase, all-alpha domain J4T80_19850 PF03477 ATP cone domain J4T80_19860 PF00583 Acetyltransferase (GNAT) family J4T80_19860 PF13380 CoA binding domain J4T80_19860 PF13607 Succinyl-CoA ligase like flavodoxin domain J4T80_19865 PF03448 MgtE intracellular N domain J4T80_19865 PF00571 CBS domain J4T80_19865 PF01769 Divalent cation transporter J4T80_19870 PF00194 Eukaryotic-type carbonic anhydrase J4T80_19875 PF00999 Sodium/hydrogen exchanger family J4T80_19875 PF02254 TrkA-N domain J4T80_19880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4T80_19880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4T80_19885 PF00723 Glycosyl hydrolases family 15 J4T80_19900 PF05166 YcgL domain J4T80_19905 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_19905 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_19915 PF00535 Glycosyl transferase family 2 J4T80_19960 PF07977 FabA-like domain J4T80_19965 PF01553 Acyltransferase J4T80_19975 PF00550 Phosphopantetheine attachment site J4T80_19980 PF04820 Tryptophan halogenase J4T80_20000 PF07676 WD40-like Beta Propeller Repeat J4T80_20000 PF00326 Prolyl oligopeptidase family J4T80_20020 PF01218 Coproporphyrinogen III oxidase J4T80_20035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4T80_20035 PF00476 DNA polymerase family A J4T80_20035 PF01612 3'-5' exonuclease J4T80_20035 PF01367 5'-3' exonuclease, C-terminal SAM fold J4T80_20045 PF06812 ImpA, N-terminal, type VI secretion system J4T80_20080 PF06761 Intracellular multiplication and human macrophage-killing J4T80_20080 PF14331 ImcF-related N-terminal domain J4T80_20080 PF06744 Type VI secretion protein IcmF C-terminal J4T80_20090 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4T80_20105 PF04717 Type VI secretion system, phage-baseplate injector J4T80_20120 PF00069 Protein kinase domain J4T80_20120 PF03793 PASTA domain J4T80_20130 PF04542 Sigma-70 region 2 J4T80_20130 PF08281 Sigma-70, region 4 J4T80_20145 PF00328 Histidine phosphatase superfamily (branch 2) J4T80_20180 PF07724 AAA domain (Cdc48 subfamily) J4T80_20180 PF17871 AAA lid domain J4T80_20180 PF10431 C-terminal, D2-small domain, of ClpB protein J4T80_20180 PF00004 ATPase family associated with various cellular activities (AAA) J4T80_20190 PF05947 Type VI secretion system, TssF J4T80_20195 PF04965 Gene 25-like lysozyme J4T80_20200 PF07024 ImpE protein J4T80_20205 PF05638 Type VI secretion system effector, Hcp J4T80_20210 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4T80_20215 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J4T80_20230 PF14602 Hexapeptide repeat of succinyl-transferase J4T80_20230 PF12464 Maltose acetyltransferase J4T80_20240 PF00580 UvrD/REP helicase N-terminal domain J4T80_20240 PF13361 UvrD-like helicase C-terminal domain J4T80_20250 PF13396 Phospholipase_D-nuclease N-terminal J4T80_20250 PF13091 PLD-like domain J4T80_20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_20255 PF03466 LysR substrate binding domain J4T80_20260 PF03737 Aldolase/RraA J4T80_20265 PF04303 PrpF protein J4T80_20275 PF00471 Ribosomal protein L33 J4T80_20280 PF00830 Ribosomal L28 family J4T80_20285 PF00873 AcrB/AcrD/AcrF family J4T80_20290 PF13533 Biotin-lipoyl like J4T80_20310 PF02527 rRNA small subunit methyltransferase G J4T80_20315 PF09423 PhoD-like phosphatase J4T80_20315 PF16655 PhoD-like phosphatase, N-terminal domain J4T80_20320 PF09423 PhoD-like phosphatase J4T80_20320 PF16655 PhoD-like phosphatase, N-terminal domain J4T80_20325 PF01648 4'-phosphopantetheinyl transferase superfamily J4T80_20330 PF04226 Transglycosylase associated protein J4T80_20340 PF03372 Endonuclease/Exonuclease/phosphatase family J4T80_20345 PF00480 ROK family J4T80_20365 PF00474 Sodium:solute symporter family J4T80_20370 PF04341 Protein of unknown function, DUF485 J4T80_20380 PF16177 Acetyl-coenzyme A synthetase N-terminus J4T80_20380 PF00501 AMP-binding enzyme J4T80_20380 PF13193 AMP-binding enzyme C-terminal domain J4T80_20385 PF00196 Bacterial regulatory proteins, luxR family J4T80_20385 PF00072 Response regulator receiver domain J4T80_20415 PF00248 Aldo/keto reductase family J4T80_20430 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4T80_20435 PF13378 Enolase C-terminal domain-like J4T80_20435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4T80_20440 PF05336 L-rhamnose mutarotase J4T80_20445 PF07690 Major Facilitator Superfamily J4T80_20450 PF01614 Bacterial transcriptional regulator J4T80_20450 PF09339 IclR helix-turn-helix domain J4T80_20455 PF02659 Putative manganese efflux pump J4T80_20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_20460 PF00512 His Kinase A (phospho-acceptor) domain J4T80_20470 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J4T80_20470 PF06165 Glycosyltransferase family 36 J4T80_20485 PF01011 PQQ enzyme repeat J4T80_20485 PF13570 PQQ-like domain J4T80_20485 PF13360 PQQ-like domain J4T80_20510 PF04357 TamB, inner membrane protein subunit of TAM complex J4T80_20515 PF01103 Surface antigen J4T80_20515 PF17243 POTRA domain TamA domain 1 J4T80_20525 PF01609 Transposase DDE domain J4T80_20525 PF05598 Transposase domain (DUF772) J4T80_20540 PF00872 Transposase, Mutator family J4T80_20575 PF02092 Glycyl-tRNA synthetase beta subunit J4T80_20575 PF05746 DALR anticodon binding domain J4T80_20580 PF02091 Glycyl-tRNA synthetase alpha subunit J4T80_20585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4T80_20585 PF00437 Type II/IV secretion system protein J4T80_20605 PF00958 GMP synthase C terminal domain J4T80_20605 PF00117 Glutamine amidotransferase class-I J4T80_20615 PF00902 Sec-independent protein translocase protein (TatC) J4T80_20620 PF02416 mttA/Hcf106 family J4T80_20625 PF02416 mttA/Hcf106 family J4T80_20635 PF00762 Ferrochelatase J4T80_20640 PF12697 Alpha/beta hydrolase family J4T80_20655 PF04381 Putative exonuclease, RdgC J4T80_20660 PF01171 PP-loop family J4T80_20670 PF00356 Bacterial regulatory proteins, lacI family J4T80_20675 PF03648 Glycosyl hydrolase family 67 N-terminus J4T80_20675 PF07477 Glycosyl hydrolase family 67 C-terminus J4T80_20675 PF07488 Glycosyl hydrolase family 67 middle domain J4T80_20685 PF13378 Enolase C-terminal domain-like J4T80_20685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4T80_20690 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J4T80_20690 PF04616 Glycosyl hydrolases family 43 J4T80_20695 PF07691 PA14 domain J4T80_20695 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4T80_20695 PF14310 Fibronectin type III-like domain J4T80_20695 PF00933 Glycosyl hydrolase family 3 N terminal domain J4T80_20700 PF08125 Mannitol dehydrogenase C-terminal domain J4T80_20700 PF01232 Mannitol dehydrogenase Rossmann domain J4T80_20730 PF00171 Aldehyde dehydrogenase family J4T80_20755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4T80_20755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4T80_20770 PF08450 SMP-30/Gluconolactonase/LRE-like region J4T80_20775 PF00331 Glycosyl hydrolase family 10 J4T80_20780 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4T80_20780 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4T80_20780 PF16355 Domain of unknown function (DUF4982) J4T80_20780 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J4T80_20780 PF00703 Glycosyl hydrolases family 2 J4T80_20785 PF02614 Glucuronate isomerase J4T80_20805 PF03422 Carbohydrate binding module (family 6) J4T80_20805 PF00331 Glycosyl hydrolase family 10 J4T80_20805 PF00553 Cellulose binding domain J4T80_20825 PF04616 Glycosyl hydrolases family 43 J4T80_20840 PF05598 Transposase domain (DUF772) J4T80_20840 PF01609 Transposase DDE domain J4T80_20860 PF08659 KR domain J4T80_20860 PF00550 Phosphopantetheine attachment site J4T80_20860 PF14765 Polyketide synthase dehydratase J4T80_20860 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T80_20860 PF00107 Zinc-binding dehydrogenase J4T80_20860 PF08240 Alcohol dehydrogenase GroES-like domain J4T80_20860 PF00698 Acyl transferase domain J4T80_20860 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T80_20860 PF16197 Ketoacyl-synthetase C-terminal extension J4T80_20865 PF01553 Acyltransferase J4T80_20875 PF00356 Bacterial regulatory proteins, lacI family J4T80_20890 PF04820 Tryptophan halogenase J4T80_20895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4T80_20900 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J4T80_20905 PF04337 Protein of unknown function, DUF480 J4T80_20925 PF13302 Acetyltransferase (GNAT) domain J4T80_20930 PF00580 UvrD/REP helicase N-terminal domain J4T80_20930 PF13361 UvrD-like helicase C-terminal domain J4T80_20935 PF00265 Thymidine kinase J4T80_20940 PF00360 Phytochrome region J4T80_20940 PF08446 PAS fold J4T80_20940 PF00512 His Kinase A (phospho-acceptor) domain J4T80_20940 PF01590 GAF domain J4T80_20940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T80_20945 PF04349 Periplasmic glucan biosynthesis protein, MdoG J4T80_20955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4T80_20955 PF06827 Zinc finger found in FPG and IleRS J4T80_20955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4T80_20985 PF03594 Benzoate membrane transport protein J4T80_20990 PF00360 Phytochrome region J4T80_20990 PF01590 GAF domain J4T80_20990 PF08446 PAS fold J4T80_20990 PF13426 PAS domain J4T80_20995 PF01126 Heme oxygenase J4T80_21000 PF07690 Major Facilitator Superfamily J4T80_21005 PF01263 Aldose 1-epimerase J4T80_21015 PF02810 SEC-C motif J4T80_21020 PF01925 Sulfite exporter TauE/SafE J4T80_21040 PF01227 GTP cyclohydrolase I J4T80_21050 PF07869 Protein of unknown function (DUF1656) J4T80_21055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T80_21055 PF00529 HlyD membrane-fusion protein of T1SS J4T80_21060 PF02321 Outer membrane efflux protein J4T80_21065 PF04632 Fusaric acid resistance protein family J4T80_21070 PF00083 Sugar (and other) transporter J4T80_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4T80_21080 PF03466 LysR substrate binding domain J4T80_21085 PF00106 short chain dehydrogenase J4T80_21095 PF13091 PLD-like domain J4T80_21095 PF13396 Phospholipase_D-nuclease N-terminal J4T80_21120 PF00872 Transposase, Mutator family J4T80_21170 PF13538 UvrD-like helicase C-terminal domain J4T80_21175 PF13361 UvrD-like helicase C-terminal domain J4T80_21175 PF12705 PD-(D/E)XK nuclease superfamily J4T80_21175 PF00580 UvrD/REP helicase N-terminal domain J4T80_21180 PF17946 RecC C-terminal domain J4T80_21215 PF00005 ABC transporter J4T80_21220 PF02405 Permease MlaE J4T80_21225 PF02470 MlaD protein J4T80_21230 PF05494 MlaC protein J4T80_21240 PF04333 MlaA lipoprotein J4T80_21250 PF00255 Glutathione peroxidase J4T80_21260 PF02646 RmuC family J4T80_21275 PF00043 Glutathione S-transferase, C-terminal domain J4T80_21275 PF13417 Glutathione S-transferase, N-terminal domain J4T80_21290 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4T80_21290 PF07971 Glycosyl hydrolase family 92 J4T80_21295 PF10947 Protein of unknown function (DUF2628) J4T80_21310 PF02595 Glycerate kinase family J4T80_21315 PF07690 Major Facilitator Superfamily J4T80_21330 PF10672 S-adenosylmethionine-dependent methyltransferase J4T80_21330 PF17785 PUA-like domain J4T80_21335 PF03741 Integral membrane protein TerC family J4T80_21340 PF01694 Rhomboid family J4T80_21345 PF03009 Glycerophosphoryl diester phosphodiesterase family J4T80_21355 PF01569 PAP2 superfamily J4T80_21360 PF01926 50S ribosome-binding GTPase J4T80_21360 PF12631 MnmE helical domain J4T80_21360 PF10396 GTP-binding protein TrmE N-terminus J4T80_21370 PF02096 60Kd inner membrane protein J4T80_21370 PF14849 YidC periplasmic domain J4T80_21375 PF00825 Ribonuclease P J4T80_21380 PF00468 Ribosomal protein L34 J4T80_21470 PF03743 Bacterial conjugation TrbI-like protein J4T80_21520 PF00872 Transposase, Mutator family J4T80_21525 PF03421 YopJ Serine/Threonine acetyltransferase